Query psy8791
Match_columns 706
No_of_seqs 506 out of 4741
Neff 9.3
Searched_HMMs 46136
Date Fri Aug 16 19:23:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8791.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8791hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3851|consensus 100.0 4.6E-62 1E-66 467.0 27.5 406 26-470 35-443 (446)
2 COG1252 Ndh NADH dehydrogenase 100.0 8.4E-50 1.8E-54 414.0 26.9 344 29-415 2-359 (405)
3 PTZ00318 NADH dehydrogenase-li 100.0 1.1E-40 2.4E-45 362.5 36.1 351 29-444 9-393 (424)
4 TIGR03169 Nterm_to_SelD pyridi 100.0 5.4E-39 1.2E-43 344.2 34.3 347 32-450 1-362 (364)
5 KOG2495|consensus 100.0 5E-36 1.1E-40 300.6 24.5 349 26-412 51-437 (491)
6 PRK09564 coenzyme A disulfide 100.0 8.7E-32 1.9E-36 296.3 33.2 293 31-384 1-315 (444)
7 PRK13512 coenzyme A disulfide 100.0 4.5E-32 9.8E-37 296.3 30.3 288 30-384 1-310 (438)
8 PRK14989 nitrite reductase sub 100.0 8.4E-31 1.8E-35 302.6 33.9 293 30-384 3-308 (847)
9 PRK04965 NADH:flavorubredoxin 100.0 1.2E-30 2.6E-35 280.4 32.9 288 31-384 3-300 (377)
10 PRK09754 phenylpropionate diox 100.0 1.8E-30 3.8E-35 280.6 33.6 291 30-384 3-307 (396)
11 TIGR02374 nitri_red_nirB nitri 100.0 9.5E-30 2.1E-34 294.7 32.8 289 33-384 1-299 (785)
12 PLN02507 glutathione reductase 100.0 1.8E-28 3.9E-33 270.8 28.5 295 16-384 11-361 (499)
13 TIGR01424 gluta_reduc_2 glutat 100.0 5.2E-28 1.1E-32 265.1 26.6 279 30-384 2-324 (446)
14 PRK08010 pyridine nucleotide-d 100.0 1.9E-27 4E-32 261.0 27.0 283 30-384 3-315 (441)
15 PRK06467 dihydrolipoamide dehy 100.0 6.3E-27 1.4E-31 257.7 30.5 283 29-384 3-335 (471)
16 PRK06116 glutathione reductase 100.0 2.9E-27 6.3E-32 260.2 27.5 278 29-384 3-326 (450)
17 KOG1336|consensus 100.0 3.3E-27 7E-32 242.5 25.6 293 29-384 73-381 (478)
18 PRK05249 soluble pyridine nucl 100.0 4E-27 8.7E-32 260.2 27.4 284 29-384 4-333 (461)
19 TIGR01292 TRX_reduct thioredox 100.0 5.8E-27 1.3E-31 244.6 26.5 284 31-386 1-299 (300)
20 TIGR03385 CoA_CoA_reduc CoA-di 100.0 1.4E-26 3E-31 253.3 30.0 279 44-384 1-302 (427)
21 PRK14694 putative mercuric red 100.0 1.6E-26 3.4E-31 255.1 29.4 282 28-384 4-333 (468)
22 COG1249 Lpd Pyruvate/2-oxoglut 100.0 5.3E-27 1.2E-31 250.7 24.7 283 29-385 3-334 (454)
23 PRK06370 mercuric reductase; V 100.0 1.8E-26 3.9E-31 254.7 29.2 281 29-384 4-332 (463)
24 TIGR01421 gluta_reduc_1 glutat 100.0 9.6E-27 2.1E-31 254.8 26.3 277 30-384 2-326 (450)
25 PRK06416 dihydrolipoamide dehy 100.0 2E-26 4.3E-31 254.6 28.3 282 29-384 3-332 (462)
26 TIGR02053 MerA mercuric reduct 100.0 1.2E-26 2.7E-31 256.1 26.1 280 31-384 1-327 (463)
27 PLN02546 glutathione reductase 100.0 2.3E-26 5E-31 254.9 27.2 279 29-384 78-411 (558)
28 PRK07251 pyridine nucleotide-d 99.9 4.5E-26 9.7E-31 249.8 26.7 281 30-384 3-314 (438)
29 PRK07845 flavoprotein disulfid 99.9 5.4E-26 1.2E-30 250.2 26.8 282 30-384 1-335 (466)
30 PTZ00058 glutathione reductase 99.9 1.7E-25 3.6E-30 247.9 30.5 286 26-384 44-430 (561)
31 PRK10262 thioredoxin reductase 99.9 3E-26 6.5E-31 241.0 23.5 297 28-390 4-317 (321)
32 PRK06912 acoL dihydrolipoamide 99.9 1.6E-25 3.5E-30 246.3 29.7 282 31-384 1-328 (458)
33 TIGR01350 lipoamide_DH dihydro 99.9 2.7E-25 5.9E-30 245.7 30.1 281 31-384 2-330 (461)
34 PRK07818 dihydrolipoamide dehy 99.9 4.3E-25 9.3E-30 243.7 31.3 282 30-384 4-334 (466)
35 PRK13748 putative mercuric red 99.9 3.8E-25 8.2E-30 250.5 30.3 281 29-384 97-426 (561)
36 PRK05976 dihydrolipoamide dehy 99.9 2.7E-25 5.8E-30 245.7 27.4 283 29-384 3-341 (472)
37 PRK14727 putative mercuric red 99.9 1E-24 2.2E-29 241.0 31.7 282 29-384 15-344 (479)
38 TIGR01423 trypano_reduc trypan 99.9 4.2E-25 9.1E-30 242.4 27.7 283 30-384 3-349 (486)
39 COG1251 NirB NAD(P)H-nitrite r 99.9 8.2E-26 1.8E-30 242.3 21.0 297 30-389 3-309 (793)
40 PRK07846 mycothione reductase; 99.9 3.3E-25 7.2E-30 242.5 26.0 277 31-384 2-323 (451)
41 PRK06115 dihydrolipoamide dehy 99.9 8.2E-25 1.8E-29 240.9 27.9 282 30-384 3-336 (466)
42 TIGR01316 gltA glutamate synth 99.9 1.7E-25 3.8E-30 244.6 21.5 318 3-387 103-449 (449)
43 TIGR01438 TGR thioredoxin and 99.9 1.7E-24 3.7E-29 238.3 28.9 281 30-384 2-342 (484)
44 PRK06292 dihydrolipoamide dehy 99.9 1.5E-24 3.3E-29 239.6 27.9 280 30-384 3-329 (460)
45 TIGR03143 AhpF_homolog putativ 99.9 1.1E-24 2.4E-29 244.1 26.6 292 29-391 3-312 (555)
46 PRK12831 putative oxidoreducta 99.9 1.9E-24 4.1E-29 236.7 25.2 321 3-390 111-463 (464)
47 PRK06327 dihydrolipoamide dehy 99.9 6.7E-24 1.5E-28 234.4 28.6 283 30-384 4-345 (475)
48 PRK09853 putative selenate red 99.9 6.7E-24 1.5E-28 243.0 28.2 311 3-388 508-842 (1019)
49 COG0492 TrxB Thioredoxin reduc 99.9 6.6E-24 1.4E-28 216.5 24.9 288 29-389 2-302 (305)
50 TIGR03452 mycothione_red mycot 99.9 1.4E-23 3E-28 230.1 28.8 278 30-384 2-326 (452)
51 PRK11749 dihydropyrimidine deh 99.9 5.1E-24 1.1E-28 234.4 25.6 287 28-391 138-455 (457)
52 TIGR03140 AhpF alkyl hydropero 99.9 2.9E-24 6.2E-29 239.1 22.7 287 28-388 210-513 (515)
53 PTZ00052 thioredoxin reductase 99.9 1.5E-23 3.3E-28 232.0 27.6 279 30-384 5-339 (499)
54 PRK12770 putative glutamate sy 99.9 1.2E-23 2.6E-28 223.8 25.7 302 29-389 17-351 (352)
55 TIGR03315 Se_ygfK putative sel 99.9 1.1E-23 2.5E-28 242.6 25.3 310 3-387 506-839 (1012)
56 PRK15317 alkyl hydroperoxide r 99.9 1.2E-23 2.5E-28 234.6 24.3 291 28-390 209-514 (517)
57 PTZ00153 lipoamide dehydrogena 99.9 1.9E-22 4.2E-27 226.2 30.2 283 30-384 116-493 (659)
58 PRK12810 gltD glutamate syntha 99.9 5.1E-23 1.1E-27 226.8 23.4 328 3-392 113-469 (471)
59 PRK12778 putative bifunctional 99.9 6E-23 1.3E-27 238.6 24.7 296 28-390 429-752 (752)
60 PRK12779 putative bifunctional 99.9 1.4E-22 3E-27 236.6 26.3 296 29-390 305-629 (944)
61 PRK12814 putative NADPH-depend 99.9 6.8E-23 1.5E-27 233.3 23.1 313 3-392 163-505 (652)
62 KOG0405|consensus 99.9 4.2E-22 9.1E-27 194.6 22.0 298 28-400 18-362 (478)
63 PRK12775 putative trifunctiona 99.9 8.1E-22 1.8E-26 232.4 25.3 323 3-391 402-758 (1006)
64 COG0446 HcaD Uncharacterized N 99.9 2.2E-21 4.7E-26 212.2 26.5 314 33-411 1-337 (415)
65 KOG1335|consensus 99.9 7.3E-22 1.6E-26 195.5 17.4 284 29-383 38-374 (506)
66 TIGR01317 GOGAT_sm_gam glutama 99.9 4.6E-21 1E-25 211.2 23.3 303 29-392 142-483 (485)
67 PRK12769 putative oxidoreducta 99.9 8.2E-21 1.8E-25 217.4 23.1 300 29-390 326-654 (654)
68 TIGR01318 gltD_gamma_fam gluta 99.9 1.3E-20 2.7E-25 207.0 23.4 296 29-387 140-465 (467)
69 PRK13984 putative oxidoreducta 99.9 2.2E-20 4.9E-25 212.7 22.6 296 28-390 281-604 (604)
70 PRK12809 putative oxidoreducta 99.8 6.9E-20 1.5E-24 208.8 23.3 299 29-390 309-637 (639)
71 KOG4716|consensus 99.8 4.2E-20 9.1E-25 179.9 16.3 302 26-401 15-377 (503)
72 COG1252 Ndh NADH dehydrogenase 99.8 4.9E-21 1.1E-25 199.6 9.8 168 466-693 2-184 (405)
73 PRK12771 putative glutamate sy 99.8 3.1E-19 6.8E-24 201.2 22.7 288 28-392 135-448 (564)
74 TIGR01372 soxA sarcosine oxida 99.8 2.3E-17 5.1E-22 196.2 30.8 284 30-389 163-473 (985)
75 KOG1346|consensus 99.8 1.7E-18 3.7E-23 172.9 17.2 318 31-412 179-539 (659)
76 PLN02852 ferredoxin-NADP+ redu 99.8 1.2E-17 2.6E-22 181.0 22.9 108 279-389 288-423 (491)
77 KOG0404|consensus 99.8 8.7E-18 1.9E-22 154.7 17.3 292 29-387 7-318 (322)
78 PTZ00318 NADH dehydrogenase-li 99.8 5.9E-19 1.3E-23 192.2 10.0 168 464-698 7-207 (424)
79 COG3634 AhpF Alkyl hydroperoxi 99.7 3.9E-17 8.5E-22 159.9 13.2 284 26-383 207-510 (520)
80 TIGR03169 Nterm_to_SelD pyridi 99.7 4E-17 8.6E-22 175.1 8.6 155 469-688 1-169 (364)
81 PRK09754 phenylpropionate diox 99.7 2.3E-16 5.1E-21 170.6 12.0 160 466-688 2-168 (396)
82 KOG3851|consensus 99.7 3.6E-17 7.9E-22 158.5 5.0 124 465-650 37-160 (446)
83 PF07992 Pyr_redox_2: Pyridine 99.7 3.1E-17 6.8E-22 160.4 2.9 110 32-143 1-129 (201)
84 PLN02172 flavin-containing mon 99.6 4.4E-15 9.5E-20 161.9 19.2 269 29-383 9-348 (461)
85 KOG0399|consensus 99.6 3.9E-16 8.5E-21 171.6 10.1 322 7-391 1763-2123(2142)
86 COG1249 Lpd Pyruvate/2-oxoglut 99.6 1.2E-16 2.6E-21 171.3 5.3 189 465-690 2-199 (454)
87 PRK14989 nitrite reductase sub 99.6 8.7E-16 1.9E-20 178.3 10.7 158 467-689 3-170 (847)
88 PRK04965 NADH:flavorubredoxin 99.6 8.9E-16 1.9E-20 165.2 10.1 153 468-687 3-164 (377)
89 KOG2495|consensus 99.6 6.5E-16 1.4E-20 156.4 7.7 177 466-703 54-257 (491)
90 PRK13512 coenzyme A disulfide 99.6 1.2E-15 2.6E-20 167.0 10.3 156 467-688 1-172 (438)
91 TIGR02374 nitri_red_nirB nitri 99.6 1.2E-15 2.6E-20 177.5 10.7 156 470-689 1-165 (785)
92 PRK14694 putative mercuric red 99.6 7.3E-16 1.6E-20 170.3 8.1 189 465-689 4-203 (468)
93 PRK06467 dihydrolipoamide dehy 99.6 1.4E-15 3E-20 167.9 7.1 188 465-689 2-199 (471)
94 PRK08010 pyridine nucleotide-d 99.6 2.3E-15 5E-20 165.4 8.5 172 466-688 2-182 (441)
95 PRK09564 coenzyme A disulfide 99.6 5.8E-15 1.3E-19 162.7 10.7 157 469-688 2-173 (444)
96 COG1148 HdrA Heterodisulfide r 99.6 2.5E-13 5.4E-18 139.4 20.9 136 249-389 399-546 (622)
97 PLN02507 glutathione reductase 99.6 2.7E-15 5.8E-20 166.2 6.6 194 467-689 25-228 (499)
98 KOG2755|consensus 99.6 1.6E-14 3.5E-19 136.8 10.3 106 32-138 1-106 (334)
99 PF00743 FMO-like: Flavin-bind 99.6 3.9E-14 8.4E-19 156.5 15.0 316 31-383 2-392 (531)
100 TIGR01424 gluta_reduc_2 glutat 99.6 3.6E-15 7.7E-20 163.8 6.5 181 467-688 2-190 (446)
101 PRK07251 pyridine nucleotide-d 99.5 6.9E-15 1.5E-19 161.5 8.1 170 466-688 2-181 (438)
102 PRK06567 putative bifunctional 99.5 1.2E-13 2.7E-18 156.9 17.6 110 28-144 381-518 (1028)
103 PRK06116 glutathione reductase 99.5 4.1E-15 8.8E-20 163.9 5.3 182 466-688 3-191 (450)
104 KOG0405|consensus 99.5 1.8E-14 3.9E-19 141.6 8.6 189 464-689 17-214 (478)
105 PRK06370 mercuric reductase; V 99.5 1.1E-14 2.3E-19 161.1 7.4 186 464-688 2-195 (463)
106 PTZ00058 glutathione reductase 99.5 1.3E-14 2.7E-19 161.4 7.6 182 467-689 48-262 (561)
107 COG0493 GltD NADPH-dependent g 99.5 7.7E-14 1.7E-18 150.0 12.5 299 30-390 123-454 (457)
108 PRK05249 soluble pyridine nucl 99.5 1.4E-14 3E-19 160.3 6.8 188 465-688 3-199 (461)
109 PRK13748 putative mercuric red 99.5 1.2E-14 2.7E-19 164.7 6.0 187 467-689 98-295 (561)
110 TIGR02053 MerA mercuric reduct 99.5 2.6E-14 5.7E-19 158.1 7.7 181 468-688 1-190 (463)
111 PLN02546 glutathione reductase 99.5 1.5E-14 3.2E-19 161.0 5.4 190 467-688 79-276 (558)
112 TIGR01438 TGR thioredoxin and 99.5 2.7E-14 5.9E-19 157.6 7.4 195 467-689 2-205 (484)
113 COG1251 NirB NAD(P)H-nitrite r 99.5 5E-14 1.1E-18 152.4 8.8 169 467-703 3-179 (793)
114 PRK14727 putative mercuric red 99.5 2.4E-14 5.1E-19 158.6 6.5 187 467-689 16-213 (479)
115 TIGR01423 trypano_reduc trypan 99.5 3.8E-14 8.2E-19 156.0 7.6 194 466-686 2-209 (486)
116 TIGR01421 gluta_reduc_1 glutat 99.5 3.6E-14 7.9E-19 155.7 7.4 183 466-689 1-191 (450)
117 PRK05976 dihydrolipoamide dehy 99.5 3.8E-14 8.3E-19 157.0 7.1 187 465-688 2-204 (472)
118 PRK06912 acoL dihydrolipoamide 99.5 3.7E-14 7.9E-19 156.4 6.8 185 469-688 2-194 (458)
119 KOG1335|consensus 99.5 3.2E-14 7E-19 141.7 5.6 189 466-690 38-237 (506)
120 PRK06115 dihydrolipoamide dehy 99.5 3E-14 6.6E-19 157.2 5.7 189 466-689 2-199 (466)
121 PRK07846 mycothione reductase; 99.5 8.5E-14 1.8E-18 152.7 8.0 179 468-688 2-190 (451)
122 TIGR01292 TRX_reduct thioredox 99.4 5.5E-13 1.2E-17 139.1 12.3 156 468-687 1-164 (300)
123 PRK06416 dihydrolipoamide dehy 99.4 1.3E-13 2.9E-18 152.5 7.8 186 466-688 3-196 (462)
124 KOG1336|consensus 99.4 3.7E-13 8.1E-18 139.4 10.3 155 467-686 74-235 (478)
125 KOG4716|consensus 99.4 8.5E-14 1.8E-18 136.3 4.8 197 467-689 19-223 (503)
126 PRK07845 flavoprotein disulfid 99.4 3E-13 6.6E-18 149.2 6.8 188 467-688 1-201 (466)
127 PRK07818 dihydrolipoamide dehy 99.4 5E-13 1.1E-17 147.8 8.5 187 465-689 2-197 (466)
128 COG2072 TrkA Predicted flavopr 99.4 1.7E-12 3.7E-17 141.2 12.3 189 465-703 6-216 (443)
129 TIGR03143 AhpF_homolog putativ 99.4 9.9E-13 2.1E-17 147.9 10.6 157 466-688 3-167 (555)
130 PTZ00153 lipoamide dehydrogena 99.4 2.6E-13 5.7E-18 152.9 5.9 201 467-689 116-337 (659)
131 PTZ00052 thioredoxin reductase 99.4 7.9E-13 1.7E-17 146.7 8.7 191 467-689 5-207 (499)
132 TIGR01350 lipoamide_DH dihydro 99.4 5.6E-13 1.2E-17 147.6 7.5 184 467-688 1-194 (461)
133 PRK06292 dihydrolipoamide dehy 99.4 3.5E-13 7.7E-18 149.1 5.5 185 465-688 1-193 (460)
134 PRK06327 dihydrolipoamide dehy 99.4 3.5E-13 7.6E-18 149.2 5.4 194 466-688 3-207 (475)
135 PRK10262 thioredoxin reductase 99.4 3.1E-12 6.7E-17 134.6 11.4 160 465-688 4-170 (321)
136 PLN02172 flavin-containing mon 99.4 3.3E-12 7.2E-17 139.5 11.5 191 466-690 9-230 (461)
137 COG0492 TrxB Thioredoxin reduc 99.3 6.3E-12 1.4E-16 128.7 12.7 99 595-705 74-179 (305)
138 PRK05329 anaerobic glycerol-3- 99.3 9.4E-11 2E-15 125.7 20.5 140 243-387 240-420 (422)
139 TIGR03452 mycothione_red mycot 99.3 2.2E-12 4.7E-17 141.8 7.9 181 467-688 2-193 (452)
140 TIGR03140 AhpF alkyl hydropero 99.3 1.2E-11 2.6E-16 138.2 10.9 158 465-688 210-376 (515)
141 PRK15317 alkyl hydroperoxide r 99.3 1.8E-11 4E-16 136.8 11.3 157 466-688 210-375 (517)
142 PF00743 FMO-like: Flavin-bind 99.2 1.2E-11 2.5E-16 136.9 6.7 191 468-701 2-222 (531)
143 PF07992 Pyr_redox_2: Pyridine 99.2 4E-12 8.6E-17 124.2 2.1 78 595-676 71-159 (201)
144 PF13738 Pyr_redox_3: Pyridine 99.2 2.2E-11 4.8E-16 119.1 6.1 94 595-700 95-198 (203)
145 PRK12831 putative oxidoreducta 99.1 8.1E-11 1.7E-15 129.4 7.8 152 466-689 139-306 (464)
146 COG2081 Predicted flavoprotein 99.1 3E-09 6.6E-14 108.8 18.4 66 256-322 97-166 (408)
147 KOG1346|consensus 99.1 2.8E-10 6.1E-15 114.8 9.3 184 466-688 177-371 (659)
148 TIGR01316 gltA glutamate synth 99.1 1.4E-10 2.9E-15 127.4 6.3 149 466-688 132-296 (449)
149 COG2072 TrkA Predicted flavopr 99.1 1.1E-09 2.5E-14 119.1 12.8 160 27-212 5-198 (443)
150 COG2081 Predicted flavoprotein 99.1 2E-10 4.3E-15 117.4 6.2 147 465-634 1-166 (408)
151 TIGR03385 CoA_CoA_reduc CoA-di 99.0 3.9E-10 8.4E-15 123.7 8.7 146 481-688 1-161 (427)
152 KOG1399|consensus 99.0 1.4E-09 3E-14 116.7 11.0 188 467-692 6-214 (448)
153 TIGR03378 glycerol3P_GlpB glyc 99.0 1.9E-08 4E-13 106.7 18.7 130 253-383 250-418 (419)
154 PRK12779 putative bifunctional 99.0 4.2E-10 9E-15 132.5 6.9 149 467-688 306-471 (944)
155 PRK12770 putative glutamate sy 99.0 5.8E-10 1.3E-14 118.8 6.8 36 467-504 18-53 (352)
156 COG0446 HcaD Uncharacterized N 99.0 1.2E-09 2.5E-14 119.5 9.3 155 470-689 1-161 (415)
157 PRK12778 putative bifunctional 99.0 4.3E-10 9.3E-15 131.4 6.1 150 466-688 430-594 (752)
158 PLN02852 ferredoxin-NADP+ redu 99.0 1.1E-09 2.5E-14 119.2 8.5 39 466-504 25-63 (491)
159 KOG1399|consensus 99.0 7.6E-09 1.6E-13 111.1 14.6 36 29-66 5-40 (448)
160 PRK11749 dihydropyrimidine deh 99.0 6.9E-10 1.5E-14 122.5 6.9 148 466-687 139-296 (457)
161 PRK09853 putative selenate red 99.0 1.6E-09 3.5E-14 125.6 9.7 146 466-686 538-690 (1019)
162 PF03486 HI0933_like: HI0933-l 98.9 6.3E-09 1.4E-13 111.4 12.6 79 240-323 84-166 (409)
163 PF13434 K_oxygenase: L-lysine 98.9 1.3E-08 2.8E-13 106.8 11.8 43 30-73 2-44 (341)
164 PRK12775 putative trifunctiona 98.9 2.4E-09 5.2E-14 127.3 6.8 149 466-687 429-594 (1006)
165 TIGR01372 soxA sarcosine oxida 98.8 7.6E-09 1.6E-13 123.9 10.1 35 467-503 163-197 (985)
166 PRK04176 ribulose-1,5-biphosph 98.8 2.1E-07 4.6E-12 93.8 18.7 121 266-389 104-256 (257)
167 TIGR03315 Se_ygfK putative sel 98.8 1.1E-08 2.3E-13 119.6 10.4 36 466-503 536-571 (1012)
168 COG3486 IucD Lysine/ornithine 98.8 3.7E-07 8E-12 93.5 20.1 109 278-392 290-415 (436)
169 COG3634 AhpF Alkyl hydroperoxi 98.8 5.2E-09 1.1E-13 103.6 6.4 99 587-690 270-380 (520)
170 PRK12810 gltD glutamate syntha 98.8 5.3E-09 1.2E-13 115.7 7.4 36 466-503 142-177 (471)
171 PF13738 Pyr_redox_3: Pyridine 98.8 1.2E-08 2.6E-13 99.7 9.0 108 34-143 1-147 (203)
172 PRK06567 putative bifunctional 98.8 4.8E-09 1E-13 120.1 6.5 34 466-501 382-415 (1028)
173 PF03486 HI0933_like: HI0933-l 98.8 1.5E-09 3.1E-14 116.3 2.2 150 468-635 1-166 (409)
174 COG0579 Predicted dehydrogenas 98.8 5.3E-08 1.2E-12 103.2 13.2 72 261-332 148-220 (429)
175 PRK12814 putative NADPH-depend 98.8 7.3E-09 1.6E-13 118.7 7.1 36 466-503 192-227 (652)
176 PTZ00188 adrenodoxin reductase 98.8 3.9E-07 8.3E-12 98.0 19.6 102 28-137 37-139 (506)
177 KOG1800|consensus 98.7 9E-08 1.9E-12 96.4 12.1 109 28-143 18-128 (468)
178 KOG0404|consensus 98.7 4.3E-08 9.3E-13 91.3 8.1 182 466-705 7-193 (322)
179 PF01266 DAO: FAD dependent ox 98.7 1.6E-07 3.4E-12 100.4 13.8 82 250-332 131-212 (358)
180 PTZ00383 malate:quinone oxidor 98.7 1.3E-07 2.7E-12 104.1 13.0 70 262-332 207-282 (497)
181 TIGR01317 GOGAT_sm_gam glutama 98.7 1.6E-08 3.5E-13 111.9 5.5 35 467-503 143-177 (485)
182 TIGR00292 thiazole biosynthesi 98.7 1.1E-06 2.3E-11 88.4 18.0 119 266-387 100-253 (254)
183 COG1635 THI4 Ribulose 1,5-bisp 98.7 5.6E-07 1.2E-11 84.3 14.5 34 31-66 31-64 (262)
184 PRK13984 putative oxidoreducta 98.7 2.3E-08 5E-13 114.4 5.9 36 466-503 282-317 (604)
185 PRK12409 D-amino acid dehydrog 98.5 7.7E-07 1.7E-11 97.2 13.4 76 255-330 186-265 (410)
186 PRK11728 hydroxyglutarate oxid 98.5 3.3E-07 7.2E-12 99.4 9.8 75 256-332 139-213 (393)
187 PF13434 K_oxygenase: L-lysine 98.5 7.7E-08 1.7E-12 101.0 4.6 43 466-509 1-43 (341)
188 KOG2755|consensus 98.5 4.5E-08 9.8E-13 93.5 2.5 79 604-686 73-156 (334)
189 PLN02463 lycopene beta cyclase 98.5 3.9E-07 8.4E-12 99.3 9.8 109 27-137 25-170 (447)
190 PRK10157 putative oxidoreducta 98.5 2.2E-06 4.9E-11 93.7 15.5 57 266-323 108-164 (428)
191 PRK06847 hypothetical protein; 98.5 1.2E-06 2.7E-11 94.4 13.3 58 266-324 107-164 (375)
192 PRK10015 oxidoreductase; Provi 98.5 4.7E-06 1E-10 91.1 17.0 56 267-323 109-164 (429)
193 PRK13977 myosin-cross-reactive 98.4 3.4E-06 7.3E-11 92.6 14.7 60 265-324 225-294 (576)
194 COG0644 FixC Dehydrogenases (f 98.4 3.7E-06 8.1E-11 91.1 14.9 58 267-324 96-153 (396)
195 COG4529 Uncharacterized protei 98.4 4.3E-05 9.3E-10 80.9 22.0 117 266-384 320-459 (474)
196 TIGR01377 soxA_mon sarcosine o 98.4 1.8E-06 3.9E-11 93.3 12.4 76 254-331 133-208 (380)
197 PF13454 NAD_binding_9: FAD-NA 98.4 9.5E-07 2.1E-11 82.1 8.3 37 597-633 117-155 (156)
198 PRK00711 D-amino acid dehydrog 98.4 7.9E-06 1.7E-10 89.4 16.9 76 254-330 189-264 (416)
199 PRK12769 putative oxidoreducta 98.4 6.4E-07 1.4E-11 103.3 8.6 36 466-503 326-361 (654)
200 TIGR01318 gltD_gamma_fam gluta 98.4 7.7E-07 1.7E-11 98.2 8.4 36 466-503 140-175 (467)
201 PRK01747 mnmC bifunctional tRN 98.4 2.3E-06 5E-11 99.0 12.6 84 255-340 397-482 (662)
202 COG2509 Uncharacterized FAD-de 98.4 3.6E-05 7.8E-10 80.3 19.3 65 265-329 172-236 (486)
203 TIGR01320 mal_quin_oxido malat 98.3 9.5E-06 2.1E-10 89.6 15.7 79 254-332 166-249 (483)
204 TIGR03329 Phn_aa_oxid putative 98.3 2.8E-05 6.2E-10 86.0 19.2 71 254-327 171-241 (460)
205 TIGR00136 gidA glucose-inhibit 98.3 3.3E-05 7.2E-10 85.6 19.2 47 342-392 349-395 (617)
206 PLN02661 Putative thiazole syn 98.3 5.4E-05 1.2E-09 78.4 19.1 114 274-389 181-329 (357)
207 PRK08773 2-octaprenyl-3-methyl 98.3 7.6E-06 1.6E-10 88.8 13.6 58 266-324 113-170 (392)
208 PRK13339 malate:quinone oxidor 98.3 9.3E-06 2E-10 89.2 14.1 79 254-332 172-256 (497)
209 PRK12809 putative oxidoreducta 98.3 2.5E-06 5.4E-11 98.0 9.7 36 466-503 309-344 (639)
210 COG0654 UbiH 2-polyprenyl-6-me 98.3 6.7E-06 1.5E-10 88.9 12.2 58 266-324 104-163 (387)
211 PRK11259 solA N-methyltryptoph 98.3 4.9E-06 1.1E-10 89.7 11.1 75 253-329 136-210 (376)
212 PRK05257 malate:quinone oxidor 98.3 3.6E-05 7.8E-10 85.2 18.0 79 254-332 171-255 (494)
213 PLN02463 lycopene beta cyclase 98.3 2.2E-06 4.8E-11 93.4 8.3 43 595-637 127-171 (447)
214 TIGR02032 GG-red-SF geranylger 98.3 2.5E-06 5.4E-11 88.5 8.5 34 31-66 1-34 (295)
215 TIGR01373 soxB sarcosine oxida 98.2 1E-05 2.2E-10 88.3 13.3 76 254-330 171-247 (407)
216 KOG1800|consensus 98.2 2E-06 4.3E-11 86.9 6.8 38 467-504 20-57 (468)
217 PRK06847 hypothetical protein; 98.2 2.8E-06 6.1E-11 91.5 8.4 37 466-504 3-39 (375)
218 PF00070 Pyr_redox: Pyridine n 98.2 1.7E-06 3.6E-11 70.4 5.0 76 32-120 1-80 (80)
219 COG1233 Phytoene dehydrogenase 98.2 3.7E-06 8.1E-11 93.3 9.3 57 265-321 223-279 (487)
220 PF05834 Lycopene_cycl: Lycope 98.2 8.1E-06 1.8E-10 87.6 11.5 106 32-137 1-143 (374)
221 TIGR01790 carotene-cycl lycope 98.2 2.9E-06 6.2E-11 92.0 8.2 103 32-136 1-141 (388)
222 PRK06184 hypothetical protein; 98.2 1.3E-05 2.8E-10 89.8 13.6 58 267-324 110-169 (502)
223 TIGR02734 crtI_fam phytoene de 98.2 9.5E-06 2E-10 91.1 12.5 58 266-323 219-276 (502)
224 COG4529 Uncharacterized protei 98.2 6E-06 1.3E-10 87.2 10.0 90 597-690 122-219 (474)
225 PLN02697 lycopene epsilon cycl 98.2 4.9E-06 1.1E-10 92.2 9.8 107 28-136 106-248 (529)
226 PRK07333 2-octaprenyl-6-methox 98.2 9.9E-06 2.2E-10 88.2 12.0 58 266-324 111-168 (403)
227 PRK07364 2-octaprenyl-6-methox 98.2 9.9E-06 2.1E-10 88.6 11.9 39 26-66 14-52 (415)
228 PRK11101 glpA sn-glycerol-3-ph 98.2 7.6E-05 1.6E-09 84.2 19.2 86 254-340 138-232 (546)
229 PF01134 GIDA: Glucose inhibit 98.2 1.9E-06 4.1E-11 90.5 5.7 101 32-134 1-150 (392)
230 TIGR00275 flavoprotein, HI0933 98.2 3.1E-05 6.8E-10 83.8 15.4 56 266-323 105-160 (400)
231 PF05834 Lycopene_cycl: Lycope 98.2 5.2E-06 1.1E-10 89.1 9.2 42 595-636 100-143 (374)
232 PRK07588 hypothetical protein; 98.2 9.6E-06 2.1E-10 87.9 11.3 55 268-324 105-159 (391)
233 PF13454 NAD_binding_9: FAD-NA 98.2 7.3E-06 1.6E-10 76.2 8.7 101 34-134 1-155 (156)
234 PRK09897 hypothetical protein; 98.2 7.8E-06 1.7E-10 90.6 10.1 38 467-504 1-38 (534)
235 COG3075 GlpB Anaerobic glycero 98.2 2.9E-05 6.2E-10 77.3 12.7 136 253-389 245-419 (421)
236 COG0665 DadA Glycine/D-amino a 98.1 1.5E-05 3.3E-10 86.3 11.7 77 253-331 143-220 (387)
237 PRK05192 tRNA uridine 5-carbox 98.1 5.8E-06 1.3E-10 91.7 8.5 36 465-502 2-37 (618)
238 PRK07190 hypothetical protein; 98.1 2.2E-05 4.8E-10 87.1 12.7 56 267-323 110-165 (487)
239 PF01494 FAD_binding_3: FAD bi 98.1 1.3E-05 2.8E-10 85.4 10.6 59 266-324 111-173 (356)
240 TIGR03364 HpnW_proposed FAD de 98.1 1.1E-05 2.3E-10 86.7 9.9 68 255-328 134-202 (365)
241 PRK08163 salicylate hydroxylas 98.1 2.9E-05 6.4E-10 84.3 13.3 57 267-324 110-167 (396)
242 KOG2820|consensus 98.1 1.3E-05 2.9E-10 80.0 9.3 75 255-329 142-218 (399)
243 PRK12771 putative glutamate sy 98.1 5.7E-06 1.2E-10 93.9 7.7 37 466-504 136-172 (564)
244 PF01134 GIDA: Glucose inhibit 98.1 3.9E-06 8.4E-11 88.2 5.8 39 595-633 109-150 (392)
245 PRK07233 hypothetical protein; 98.1 2.6E-05 5.7E-10 85.8 12.7 56 265-321 197-252 (434)
246 PRK08244 hypothetical protein; 98.1 1.8E-05 3.9E-10 88.5 11.4 59 266-324 100-160 (493)
247 PRK08773 2-octaprenyl-3-methyl 98.1 9.6E-06 2.1E-10 88.0 8.8 39 464-504 3-41 (392)
248 TIGR01790 carotene-cycl lycope 98.1 1.1E-05 2.4E-10 87.3 9.0 41 595-635 98-141 (388)
249 PRK08132 FAD-dependent oxidore 98.1 4E-05 8.6E-10 86.9 13.6 58 267-324 126-186 (547)
250 TIGR01988 Ubi-OHases Ubiquinon 98.1 2E-05 4.4E-10 85.2 10.9 58 266-324 106-164 (385)
251 PRK07333 2-octaprenyl-6-methox 98.1 8.3E-06 1.8E-10 88.9 7.8 37 467-503 1-37 (403)
252 PRK05192 tRNA uridine 5-carbox 98.1 1E-05 2.3E-10 89.7 8.6 105 29-135 3-156 (618)
253 COG1232 HemY Protoporphyrinoge 98.1 2.4E-05 5.2E-10 83.9 10.9 36 31-66 1-36 (444)
254 PRK06183 mhpA 3-(3-hydroxyphen 98.1 4.9E-05 1.1E-09 85.9 14.1 59 266-324 113-175 (538)
255 TIGR01789 lycopene_cycl lycope 98.0 2.4E-05 5.2E-10 83.7 11.0 102 32-137 1-139 (370)
256 PLN00093 geranylgeranyl diphos 98.0 1.8E-05 3.9E-10 86.7 10.1 38 27-66 36-73 (450)
257 PRK07608 ubiquinone biosynthes 98.0 1.2E-05 2.5E-10 87.2 8.6 37 29-67 4-40 (388)
258 PRK08020 ubiF 2-octaprenyl-3-m 98.0 3.5E-05 7.6E-10 83.6 11.7 57 267-324 113-170 (391)
259 COG0029 NadB Aspartate oxidase 98.0 6.4E-05 1.4E-09 79.5 12.9 32 32-66 9-40 (518)
260 PRK06184 hypothetical protein; 98.0 1.6E-05 3.5E-10 89.0 9.1 37 466-504 2-38 (502)
261 PRK07236 hypothetical protein; 98.0 2.4E-05 5.2E-10 84.6 10.0 36 29-66 5-40 (386)
262 PTZ00188 adrenodoxin reductase 98.0 1.2E-05 2.6E-10 86.6 7.5 38 466-504 38-75 (506)
263 TIGR02023 BchP-ChlP geranylger 98.0 2.5E-05 5.5E-10 84.5 10.0 32 31-64 1-32 (388)
264 PF13450 NAD_binding_8: NAD(P) 98.0 8E-06 1.7E-10 63.8 4.4 30 35-66 1-30 (68)
265 PRK05868 hypothetical protein; 98.0 3.5E-05 7.5E-10 82.8 10.8 35 30-66 1-35 (372)
266 PRK06834 hypothetical protein; 98.0 1.8E-05 3.9E-10 87.9 8.9 37 466-504 2-38 (488)
267 PRK06753 hypothetical protein; 98.0 2.1E-05 4.6E-10 84.7 8.9 34 31-66 1-34 (373)
268 COG0493 GltD NADPH-dependent g 98.0 6.4E-06 1.4E-10 89.2 4.8 35 467-503 123-157 (457)
269 COG2907 Predicted NAD/FAD-bind 98.0 7.6E-05 1.6E-09 74.9 11.6 37 29-68 7-43 (447)
270 PF04820 Trp_halogenase: Trypt 98.0 2.5E-05 5.4E-10 85.7 9.2 58 266-324 154-212 (454)
271 PRK10015 oxidoreductase; Provi 98.0 4.2E-05 9.1E-10 83.6 11.0 38 466-505 4-41 (429)
272 PRK06834 hypothetical protein; 97.9 3E-05 6.5E-10 86.1 9.7 108 30-139 3-159 (488)
273 PRK10157 putative oxidoreducta 97.9 2.6E-05 5.6E-10 85.3 8.9 38 466-505 4-41 (428)
274 PRK05714 2-octaprenyl-3-methyl 97.9 2.5E-05 5.4E-10 85.2 8.7 34 30-65 2-35 (405)
275 PRK05868 hypothetical protein; 97.9 3.9E-05 8.4E-10 82.4 9.9 36 467-504 1-36 (372)
276 PRK07045 putative monooxygenas 97.9 2.9E-05 6.3E-10 84.1 9.0 37 29-67 4-40 (388)
277 TIGR02032 GG-red-SF geranylger 97.9 2.5E-05 5.3E-10 81.0 8.0 35 468-504 1-35 (295)
278 PRK08849 2-octaprenyl-3-methyl 97.9 3.5E-05 7.5E-10 83.3 9.4 35 466-502 2-36 (384)
279 PRK07494 2-octaprenyl-6-methox 97.9 1.9E-05 4E-10 85.6 7.3 37 465-503 5-41 (388)
280 COG0644 FixC Dehydrogenases (f 97.9 3.7E-05 8E-10 83.3 9.6 40 467-508 3-42 (396)
281 PLN02697 lycopene epsilon cycl 97.9 2.1E-05 4.6E-10 87.2 7.6 34 466-501 107-140 (529)
282 PTZ00363 rab-GDP dissociation 97.9 8E-05 1.7E-09 80.9 11.9 60 265-324 231-291 (443)
283 PRK07494 2-octaprenyl-6-methox 97.9 2.7E-05 5.8E-10 84.4 8.3 36 29-66 6-41 (388)
284 PRK06185 hypothetical protein; 97.9 0.00013 2.8E-09 79.6 13.7 58 267-324 109-170 (407)
285 PRK07236 hypothetical protein; 97.9 3.4E-05 7.4E-10 83.4 9.0 38 464-503 3-40 (386)
286 PRK09126 hypothetical protein; 97.9 6.2E-05 1.3E-09 81.7 10.7 35 30-66 3-37 (392)
287 TIGR03219 salicylate_mono sali 97.9 3.5E-05 7.6E-10 84.2 8.7 34 31-66 1-35 (414)
288 TIGR00275 flavoprotein, HI0933 97.9 1.8E-05 3.9E-10 85.7 6.2 32 471-504 1-32 (400)
289 TIGR02028 ChlP geranylgeranyl 97.9 3.8E-05 8.3E-10 83.2 8.5 34 31-66 1-34 (398)
290 PRK06126 hypothetical protein; 97.9 0.00014 3E-09 82.6 13.4 58 267-324 127-189 (545)
291 PRK07588 hypothetical protein; 97.9 5.8E-05 1.2E-09 81.9 9.8 35 468-504 1-35 (391)
292 PRK08163 salicylate hydroxylas 97.9 4.1E-05 8.9E-10 83.2 8.7 36 467-504 4-39 (396)
293 PRK09897 hypothetical protein; 97.9 3E-05 6.4E-10 86.0 7.6 37 30-66 1-37 (534)
294 PRK08013 oxidoreductase; Provi 97.9 4.4E-05 9.5E-10 83.0 8.9 36 466-503 2-37 (400)
295 PRK07364 2-octaprenyl-6-methox 97.8 5.4E-05 1.2E-09 82.8 9.5 41 462-504 13-53 (415)
296 PRK07608 ubiquinone biosynthes 97.8 5.3E-05 1.1E-09 82.1 9.2 36 467-504 5-40 (388)
297 PRK11445 putative oxidoreducta 97.8 4.6E-05 1E-09 81.2 8.4 34 467-503 1-34 (351)
298 PRK08274 tricarballylate dehyd 97.8 0.00046 9.9E-09 76.7 16.6 59 266-324 131-194 (466)
299 PRK06753 hypothetical protein; 97.8 6.1E-05 1.3E-09 81.1 8.9 35 468-504 1-35 (373)
300 TIGR01984 UbiH 2-polyprenyl-6- 97.8 4E-05 8.7E-10 82.8 7.4 33 32-66 1-34 (382)
301 TIGR01789 lycopene_cycl lycope 97.8 9.3E-05 2E-09 79.2 9.8 35 469-503 1-35 (370)
302 COG1231 Monoamine oxidase [Ami 97.8 0.00035 7.5E-09 73.6 13.3 41 28-70 5-45 (450)
303 PRK07190 hypothetical protein; 97.8 6.6E-05 1.4E-09 83.3 8.6 37 466-504 4-40 (487)
304 PRK07045 putative monooxygenas 97.8 8.6E-05 1.9E-09 80.4 9.0 37 466-504 4-40 (388)
305 COG0654 UbiH 2-polyprenyl-6-me 97.7 0.0001 2.3E-09 79.6 9.4 33 467-501 2-34 (387)
306 TIGR02023 BchP-ChlP geranylger 97.7 8E-05 1.7E-09 80.6 8.3 32 468-501 1-32 (388)
307 PRK11445 putative oxidoreducta 97.7 0.0001 2.3E-09 78.5 8.9 34 30-66 1-34 (351)
308 PRK09126 hypothetical protein; 97.7 9E-05 1.9E-09 80.4 8.6 35 467-503 3-37 (392)
309 PRK08850 2-octaprenyl-6-methox 97.7 9.2E-05 2E-09 80.7 8.2 35 465-501 2-36 (405)
310 KOG2665|consensus 97.7 0.0001 2.2E-09 72.9 7.4 75 257-332 187-266 (453)
311 PRK08401 L-aspartate oxidase; 97.7 6E-05 1.3E-09 83.4 6.3 34 467-502 1-34 (466)
312 PRK05714 2-octaprenyl-3-methyl 97.7 0.00012 2.7E-09 79.7 8.6 34 467-502 2-35 (405)
313 PF01946 Thi4: Thi4 family; PD 97.7 4.4E-05 9.6E-10 72.4 4.3 35 30-66 17-51 (230)
314 TIGR00292 thiazole biosynthesi 97.7 9.1E-05 2E-09 74.5 6.9 36 467-504 21-56 (254)
315 PRK04176 ribulose-1,5-biphosph 97.7 7.3E-05 1.6E-09 75.4 6.2 36 467-504 25-60 (257)
316 PF01266 DAO: FAD dependent ox 97.7 2.8E-05 6E-10 83.0 3.3 40 595-635 160-203 (358)
317 PRK06996 hypothetical protein; 97.7 0.0011 2.3E-08 72.1 15.7 59 266-324 115-175 (398)
318 PLN00093 geranylgeranyl diphos 97.6 0.00014 3E-09 79.8 8.6 35 466-502 38-72 (450)
319 KOG2415|consensus 97.6 0.00038 8.3E-09 71.5 10.7 37 30-66 76-116 (621)
320 COG3380 Predicted NAD/FAD-depe 97.6 4.7E-05 1E-09 73.9 4.0 35 467-503 1-35 (331)
321 PRK05732 2-octaprenyl-6-methox 97.6 0.00015 3.3E-09 78.6 8.7 37 465-501 1-38 (395)
322 KOG0399|consensus 97.6 9.2E-05 2E-09 84.0 6.8 40 463-504 1781-1820(2142)
323 PRK08401 L-aspartate oxidase; 97.6 0.00019 4.2E-09 79.4 9.5 34 30-65 1-34 (466)
324 TIGR01988 Ubi-OHases Ubiquinon 97.6 0.00018 3.8E-09 77.9 9.0 34 469-504 1-34 (385)
325 PRK08244 hypothetical protein; 97.6 0.00011 2.5E-09 82.1 7.7 35 468-504 3-37 (493)
326 TIGR02028 ChlP geranylgeranyl 97.6 0.00019 4E-09 77.8 8.8 34 468-503 1-34 (398)
327 PRK08020 ubiF 2-octaprenyl-3-m 97.6 0.0002 4.4E-09 77.6 9.0 36 466-503 4-39 (391)
328 KOG0029|consensus 97.6 7.9E-05 1.7E-09 81.9 5.7 39 26-66 11-49 (501)
329 COG0579 Predicted dehydrogenas 97.6 8.4E-05 1.8E-09 79.2 5.7 40 465-504 1-40 (429)
330 COG0445 GidA Flavin-dependent 97.6 5.7E-05 1.2E-09 80.5 4.2 39 595-633 114-156 (621)
331 PLN02985 squalene monooxygenas 97.6 0.00057 1.2E-08 76.3 12.4 65 437-503 6-77 (514)
332 PF00070 Pyr_redox: Pyridine n 97.6 0.00039 8.5E-09 56.4 8.2 58 239-300 15-74 (80)
333 PRK08132 FAD-dependent oxidore 97.6 0.00022 4.8E-09 80.9 9.2 37 466-504 22-58 (547)
334 TIGR03219 salicylate_mono sali 97.6 0.00027 5.9E-09 77.2 9.4 34 469-504 2-36 (414)
335 PF12831 FAD_oxidored: FAD dep 97.6 7.6E-05 1.7E-09 81.6 5.1 34 32-67 1-34 (428)
336 PRK06185 hypothetical protein; 97.6 0.00027 5.9E-09 77.1 9.3 36 466-503 5-40 (407)
337 PRK06183 mhpA 3-(3-hydroxyphen 97.5 0.00025 5.4E-09 80.2 9.1 38 465-504 8-45 (538)
338 TIGR01984 UbiH 2-polyprenyl-6- 97.5 0.00023 5E-09 76.9 8.5 35 469-505 1-36 (382)
339 TIGR00136 gidA glucose-inhibit 97.5 0.0002 4.3E-09 79.6 7.7 34 468-503 1-34 (617)
340 PRK11259 solA N-methyltryptoph 97.5 0.00021 4.6E-09 77.0 7.6 35 466-502 2-36 (376)
341 PRK11728 hydroxyglutarate oxid 97.5 0.00016 3.4E-09 78.5 6.5 37 467-503 2-38 (393)
342 COG3380 Predicted NAD/FAD-depe 97.5 0.00012 2.6E-09 71.1 4.7 34 31-66 2-35 (331)
343 PF01494 FAD_binding_3: FAD bi 97.5 7.4E-05 1.6E-09 79.6 3.4 39 468-508 2-40 (356)
344 PF04820 Trp_halogenase: Trypt 97.4 0.0002 4.3E-09 78.7 6.3 42 595-636 167-212 (454)
345 TIGR01989 COQ6 Ubiquinone bios 97.4 0.00033 7.2E-09 77.0 8.1 35 468-502 1-37 (437)
346 COG3349 Uncharacterized conser 97.4 0.00012 2.7E-09 78.3 4.4 38 31-70 1-38 (485)
347 PRK06126 hypothetical protein; 97.4 0.00033 7.1E-09 79.5 8.2 37 467-505 7-43 (545)
348 KOG2853|consensus 97.4 0.0074 1.6E-07 60.7 16.3 94 262-358 239-353 (509)
349 TIGR01810 betA choline dehydro 97.4 0.004 8.8E-08 70.3 16.8 67 268-334 196-267 (532)
350 PRK06617 2-octaprenyl-6-methox 97.4 0.00037 8.1E-09 75.0 8.1 34 467-502 1-34 (374)
351 COG3486 IucD Lysine/ornithine 97.4 0.00044 9.6E-09 71.4 7.7 197 464-703 2-225 (436)
352 KOG2852|consensus 97.4 0.00051 1.1E-08 67.3 7.5 65 265-330 146-215 (380)
353 PRK11883 protoporphyrinogen ox 97.3 0.00019 4.2E-09 79.4 5.0 37 31-67 1-37 (451)
354 PF06039 Mqo: Malate:quinone o 97.3 0.0023 5.1E-08 67.8 12.1 78 266-343 181-266 (488)
355 PRK07208 hypothetical protein; 97.3 0.00028 6E-09 78.8 5.3 58 265-322 217-279 (479)
356 PLN02268 probable polyamine ox 97.3 0.00027 5.8E-09 77.8 4.9 35 31-67 1-35 (435)
357 PRK08013 oxidoreductase; Provi 97.3 0.00029 6.3E-09 76.6 5.1 58 266-324 111-169 (400)
358 PRK08849 2-octaprenyl-3-methyl 97.3 0.0003 6.5E-09 76.0 5.1 56 268-324 112-168 (384)
359 PLN02661 Putative thiazole syn 97.2 0.001 2.2E-08 69.1 8.3 37 467-504 92-128 (357)
360 TIGR02360 pbenz_hydroxyl 4-hyd 97.2 0.00033 7E-09 75.8 4.9 35 30-66 2-36 (390)
361 PRK07538 hypothetical protein; 97.2 0.00072 1.6E-08 73.8 7.6 34 468-503 1-34 (413)
362 PF06100 Strep_67kDa_ant: Stre 97.2 0.00079 1.7E-08 72.0 7.5 37 30-66 2-40 (500)
363 COG0445 GidA Flavin-dependent 97.2 0.00023 5.1E-09 76.0 3.4 104 30-135 4-157 (621)
364 TIGR00562 proto_IX_ox protopor 97.2 0.00035 7.6E-09 77.6 5.0 38 30-67 2-41 (462)
365 PF13450 NAD_binding_8: NAD(P) 97.2 0.00039 8.4E-09 54.3 3.5 31 472-504 1-31 (68)
366 PRK06475 salicylate hydroxylas 97.1 0.0012 2.6E-08 71.8 8.3 35 468-504 3-37 (400)
367 TIGR02360 pbenz_hydroxyl 4-hyd 97.1 0.00097 2.1E-08 72.2 7.5 34 468-503 3-36 (390)
368 PRK05335 tRNA (uracil-5-)-meth 97.1 0.00047 1E-08 73.4 4.9 47 342-392 322-368 (436)
369 PRK07538 hypothetical protein; 97.1 0.00042 9E-09 75.7 4.7 34 31-66 1-34 (413)
370 PLN02985 squalene monooxygenas 97.1 0.00055 1.2E-08 76.4 5.5 38 26-65 39-76 (514)
371 PRK08243 4-hydroxybenzoate 3-m 97.1 0.00049 1.1E-08 74.6 4.9 35 30-66 2-36 (392)
372 PTZ00367 squalene epoxidase; P 97.1 0.00058 1.3E-08 76.7 5.5 38 26-65 29-66 (567)
373 PLN02927 antheraxanthin epoxid 97.1 0.00097 2.1E-08 75.6 7.1 36 465-502 79-114 (668)
374 PRK06617 2-octaprenyl-6-methox 97.1 0.00052 1.1E-08 73.9 4.8 57 266-324 104-161 (374)
375 COG0578 GlpA Glycerol-3-phosph 97.1 0.0019 4.2E-08 70.5 9.0 65 265-330 163-232 (532)
376 PRK08243 4-hydroxybenzoate 3-m 97.1 0.0015 3.2E-08 70.8 8.3 35 467-503 2-36 (392)
377 PTZ00367 squalene epoxidase; P 97.1 0.0017 3.8E-08 73.0 8.9 43 458-502 24-66 (567)
378 KOG1276|consensus 97.1 0.00066 1.4E-08 70.3 5.0 38 29-66 10-47 (491)
379 KOG0685|consensus 97.1 0.00084 1.8E-08 70.7 5.8 40 26-66 17-56 (498)
380 PRK12266 glpD glycerol-3-phosp 97.1 0.00064 1.4E-08 76.0 5.4 66 264-329 153-222 (508)
381 PRK06475 salicylate hydroxylas 97.1 0.00059 1.3E-08 74.2 4.9 59 266-324 107-168 (400)
382 PRK12416 protoporphyrinogen ox 97.0 0.00058 1.3E-08 75.8 4.9 52 266-320 226-277 (463)
383 PRK08850 2-octaprenyl-6-methox 97.0 0.00064 1.4E-08 74.1 5.1 33 30-64 4-36 (405)
384 TIGR02733 desat_CrtD C-3',4' d 97.0 0.0006 1.3E-08 76.3 4.9 58 265-322 231-293 (492)
385 PLN02576 protoporphyrinogen ox 97.0 0.00069 1.5E-08 76.0 5.4 39 28-67 10-48 (496)
386 TIGR00031 UDP-GALP_mutase UDP- 97.0 0.00072 1.6E-08 71.8 5.0 34 31-66 2-35 (377)
387 COG1635 THI4 Ribulose 1,5-bisp 97.0 0.00034 7.4E-09 66.0 2.2 34 469-504 32-65 (262)
388 TIGR01989 COQ6 Ubiquinone bios 97.0 0.00063 1.4E-08 74.8 4.6 33 31-65 1-37 (437)
389 PLN02487 zeta-carotene desatur 97.0 0.00095 2.1E-08 74.9 6.0 57 266-322 295-359 (569)
390 PRK01747 mnmC bifunctional tRN 96.9 0.0022 4.7E-08 74.5 8.6 34 467-502 260-293 (662)
391 PF12831 FAD_oxidored: FAD dep 96.9 0.00031 6.7E-09 76.9 1.5 34 469-504 1-34 (428)
392 PLN02927 antheraxanthin epoxid 96.9 0.00087 1.9E-08 76.0 5.1 36 28-65 79-114 (668)
393 PRK13369 glycerol-3-phosphate 96.9 0.0011 2.3E-08 74.3 5.3 66 263-328 152-220 (502)
394 TIGR02731 phytoene_desat phyto 96.9 0.00095 2.1E-08 73.9 4.7 56 266-321 213-274 (453)
395 PF01946 Thi4: Thi4 family; PD 96.9 0.0008 1.7E-08 64.0 3.3 36 467-504 17-52 (230)
396 PTZ00139 Succinate dehydrogena 96.8 0.0011 2.4E-08 75.7 5.0 57 8-66 3-63 (617)
397 PRK08255 salicylyl-CoA 5-hydro 96.8 0.0012 2.7E-08 77.5 5.1 36 31-66 1-36 (765)
398 TIGR02730 carot_isom carotene 96.8 0.0012 2.6E-08 73.9 4.8 60 265-324 228-287 (493)
399 PRK06481 fumarate reductase fl 96.8 0.0016 3.4E-08 72.9 5.6 61 266-326 190-255 (506)
400 PRK08294 phenol 2-monooxygenas 96.8 0.0037 8.1E-08 71.7 8.6 39 465-504 30-68 (634)
401 PF00890 FAD_binding_2: FAD bi 96.8 0.0013 2.8E-08 71.9 4.7 60 265-324 140-204 (417)
402 PRK07121 hypothetical protein; 96.8 0.0019 4.1E-08 72.2 6.0 36 29-66 19-54 (492)
403 PRK05732 2-octaprenyl-6-methox 96.8 0.0015 3.2E-08 70.9 5.0 56 268-324 114-170 (395)
404 PLN02568 polyamine oxidase 96.7 0.0017 3.7E-08 72.8 5.4 38 30-67 5-45 (539)
405 PLN02464 glycerol-3-phosphate 96.7 0.0017 3.8E-08 74.3 5.3 68 263-330 229-303 (627)
406 PLN02328 lysine-specific histo 96.7 0.0019 4.1E-08 74.7 5.5 40 26-67 234-273 (808)
407 TIGR00137 gid_trmFO tRNA:m(5)U 96.7 0.0016 3.6E-08 69.8 4.6 45 345-392 323-367 (433)
408 PLN00128 Succinate dehydrogena 96.7 0.0025 5.4E-08 73.0 6.3 49 15-65 31-83 (635)
409 COG2509 Uncharacterized FAD-de 96.7 0.0076 1.7E-07 63.4 9.2 39 595-633 186-228 (486)
410 PLN02612 phytoene desaturase 96.7 0.0023 5.1E-08 72.5 6.0 55 266-320 308-363 (567)
411 PLN02529 lysine-specific histo 96.7 0.0021 4.6E-08 73.9 5.6 38 27-66 157-194 (738)
412 TIGR02732 zeta_caro_desat caro 96.7 0.0016 3.5E-08 72.2 4.5 57 266-322 219-283 (474)
413 KOG2820|consensus 96.7 0.0019 4.1E-08 65.0 4.4 37 465-503 5-41 (399)
414 PRK08294 phenol 2-monooxygenas 96.7 0.0018 3.9E-08 74.3 4.9 36 29-66 31-67 (634)
415 TIGR01813 flavo_cyto_c flavocy 96.6 0.0019 4.1E-08 71.2 4.7 61 266-326 130-196 (439)
416 KOG2614|consensus 96.6 0.0021 4.6E-08 66.8 4.7 35 30-66 2-36 (420)
417 PRK07208 hypothetical protein; 96.6 0.0015 3.2E-08 72.9 3.9 38 464-503 1-38 (479)
418 COG1233 Phytoene dehydrogenase 96.6 0.0014 3E-08 73.0 3.4 37 465-503 1-37 (487)
419 KOG2844|consensus 96.6 0.0027 5.8E-08 69.3 5.4 82 249-331 170-251 (856)
420 PRK06996 hypothetical protein; 96.6 0.0053 1.1E-07 66.7 7.9 36 467-502 11-48 (398)
421 KOG2311|consensus 96.6 0.002 4.3E-08 67.5 3.9 50 10-65 12-61 (679)
422 PLN02676 polyamine oxidase 96.6 0.0027 5.8E-08 70.6 5.2 37 29-67 25-62 (487)
423 KOG2853|consensus 96.5 0.011 2.3E-07 59.6 8.7 51 467-519 86-139 (509)
424 KOG0029|consensus 96.5 0.002 4.3E-08 71.1 3.8 38 464-503 12-49 (501)
425 PRK07057 sdhA succinate dehydr 96.5 0.0033 7.1E-08 71.6 5.6 35 29-65 11-45 (591)
426 PRK12837 3-ketosteroid-delta-1 96.5 0.0027 5.9E-08 71.2 4.7 34 30-66 7-40 (513)
427 PRK05945 sdhA succinate dehydr 96.4 0.003 6.5E-08 71.9 4.9 37 30-66 3-39 (575)
428 PF00732 GMC_oxred_N: GMC oxid 96.4 0.0026 5.7E-08 66.0 3.8 66 267-332 194-268 (296)
429 PRK07804 L-aspartate oxidase; 96.4 0.0033 7.2E-08 70.9 4.8 36 29-66 15-50 (541)
430 PRK08641 sdhA succinate dehydr 96.4 0.0033 7.1E-08 71.6 4.8 35 30-66 3-37 (589)
431 PRK07573 sdhA succinate dehydr 96.4 0.0038 8.3E-08 71.7 5.2 49 15-65 15-68 (640)
432 PRK08275 putative oxidoreducta 96.4 0.0036 7.8E-08 70.9 4.9 51 337-390 357-407 (554)
433 COG1232 HemY Protoporphyrinoge 96.4 0.0029 6.2E-08 68.2 3.9 36 468-503 1-36 (444)
434 TIGR00031 UDP-GALP_mutase UDP- 96.3 0.0029 6.3E-08 67.3 3.7 35 467-503 1-35 (377)
435 PRK12842 putative succinate de 96.3 0.0041 8.9E-08 70.8 5.1 59 266-324 214-276 (574)
436 PRK12834 putative FAD-binding 96.3 0.0044 9.6E-08 70.2 5.1 35 29-65 3-37 (549)
437 PRK12409 D-amino acid dehydrog 96.3 0.0028 6.1E-08 69.2 3.4 35 467-503 1-35 (410)
438 KOG2311|consensus 96.3 0.0039 8.5E-08 65.4 4.2 36 465-502 26-61 (679)
439 PLN02815 L-aspartate oxidase 96.3 0.0058 1.3E-07 69.3 6.0 36 28-66 27-62 (594)
440 PRK06854 adenylylsulfate reduc 96.3 0.0041 8.9E-08 71.1 4.7 45 343-389 389-433 (608)
441 PRK07803 sdhA succinate dehydr 96.3 0.0038 8.2E-08 71.6 4.5 35 30-66 8-42 (626)
442 TIGR01812 sdhA_frdA_Gneg succi 96.2 0.0041 8.8E-08 70.9 4.5 33 32-66 1-33 (566)
443 PRK06452 sdhA succinate dehydr 96.2 0.0043 9.4E-08 70.3 4.6 34 30-65 5-38 (566)
444 PRK09231 fumarate reductase fl 96.2 0.0048 1E-07 70.2 4.8 52 336-389 358-416 (582)
445 PRK09078 sdhA succinate dehydr 96.2 0.0047 1E-07 70.5 4.6 34 30-65 12-45 (598)
446 TIGR01176 fum_red_Fp fumarate 96.2 0.0049 1.1E-07 70.0 4.7 37 30-66 3-39 (580)
447 PRK06069 sdhA succinate dehydr 96.1 0.005 1.1E-07 70.1 4.6 35 30-66 5-42 (577)
448 COG0029 NadB Aspartate oxidase 96.1 0.0067 1.4E-07 64.6 5.0 33 469-504 9-41 (518)
449 PRK12835 3-ketosteroid-delta-1 96.1 0.0056 1.2E-07 69.6 4.9 36 29-66 10-45 (584)
450 PRK08958 sdhA succinate dehydr 96.1 0.0052 1.1E-07 69.9 4.6 34 30-65 7-40 (588)
451 PRK01438 murD UDP-N-acetylmura 96.1 0.0067 1.5E-07 67.6 5.4 79 30-140 16-94 (480)
452 PRK07843 3-ketosteroid-delta-1 96.1 0.0062 1.4E-07 69.0 5.1 63 266-328 208-275 (557)
453 PRK12266 glpD glycerol-3-phosp 96.1 0.0043 9.4E-08 69.4 3.8 38 464-503 3-40 (508)
454 PRK11883 protoporphyrinogen ox 96.1 0.0045 9.7E-08 68.5 3.9 37 468-504 1-37 (451)
455 TIGR02061 aprA adenosine phosp 96.1 0.0057 1.2E-07 69.5 4.5 41 349-389 404-444 (614)
456 PRK12844 3-ketosteroid-delta-1 96.1 0.0066 1.4E-07 68.7 5.0 35 30-66 6-40 (557)
457 COG0562 Glf UDP-galactopyranos 96.1 0.0087 1.9E-07 60.1 5.1 36 30-67 1-36 (374)
458 PRK08626 fumarate reductase fl 96.1 0.0058 1.3E-07 70.4 4.5 35 30-66 5-39 (657)
459 PLN03000 amine oxidase 96.0 0.013 2.7E-07 68.1 6.9 36 29-66 183-218 (881)
460 TIGR00551 nadB L-aspartate oxi 96.0 0.0069 1.5E-07 67.6 4.6 34 30-66 2-35 (488)
461 TIGR00562 proto_IX_ox protopor 96.0 0.0054 1.2E-07 68.1 3.7 37 467-503 2-40 (462)
462 KOG2960|consensus 96.0 0.0018 3.9E-08 60.5 -0.1 35 31-65 77-111 (328)
463 PRK06175 L-aspartate oxidase; 95.9 0.0068 1.5E-07 66.4 4.3 58 266-323 128-189 (433)
464 COG0562 Glf UDP-galactopyranos 95.9 0.007 1.5E-07 60.7 3.8 36 467-504 1-36 (374)
465 PRK06263 sdhA succinate dehydr 95.9 0.0071 1.5E-07 68.4 4.4 53 336-390 348-406 (543)
466 PRK12416 protoporphyrinogen ox 95.9 0.0067 1.4E-07 67.4 3.8 37 467-503 1-41 (463)
467 PRK12839 hypothetical protein; 95.8 0.012 2.5E-07 66.9 5.4 37 29-67 7-43 (572)
468 PRK05335 tRNA (uracil-5-)-meth 95.8 0.0069 1.5E-07 64.7 3.3 36 467-504 2-37 (436)
469 PRK13369 glycerol-3-phosphate 95.8 0.0077 1.7E-07 67.4 3.9 38 464-503 3-40 (502)
470 PRK12845 3-ketosteroid-delta-1 95.8 0.015 3.3E-07 65.8 6.2 41 26-69 12-52 (564)
471 KOG1298|consensus 95.8 0.011 2.4E-07 60.6 4.5 38 26-65 41-78 (509)
472 PRK07395 L-aspartate oxidase; 95.8 0.0097 2.1E-07 67.2 4.6 34 30-66 9-42 (553)
473 PRK08274 tricarballylate dehyd 95.7 0.0073 1.6E-07 67.1 3.5 37 465-503 2-38 (466)
474 PLN02268 probable polyamine ox 95.7 0.0078 1.7E-07 66.2 3.6 34 469-504 2-35 (435)
475 PRK02106 choline dehydrogenase 95.7 0.012 2.6E-07 66.9 5.2 66 270-335 205-275 (560)
476 TIGR01377 soxA_mon sarcosine o 95.7 0.0074 1.6E-07 65.1 3.3 34 468-503 1-34 (380)
477 KOG2960|consensus 95.7 0.0044 9.5E-08 58.0 1.2 34 469-502 78-111 (328)
478 TIGR02352 thiamin_ThiO glycine 95.7 0.051 1.1E-06 57.4 9.5 86 253-340 124-209 (337)
479 COG1053 SdhA Succinate dehydro 95.6 0.013 2.8E-07 65.8 4.8 37 28-66 4-40 (562)
480 TIGR01811 sdhA_Bsu succinate d 95.6 0.0093 2E-07 68.1 3.8 31 33-65 1-31 (603)
481 PRK05257 malate:quinone oxidor 95.6 0.0089 1.9E-07 66.4 3.5 39 465-503 3-41 (494)
482 KOG2415|consensus 95.6 0.0077 1.7E-07 62.2 2.7 37 467-503 76-116 (621)
483 TIGR02733 desat_CrtD C-3',4' d 95.6 0.0095 2.1E-07 66.7 3.8 35 468-504 2-36 (492)
484 PTZ00306 NADH-dependent fumara 95.6 0.015 3.4E-07 71.4 5.7 37 28-66 407-443 (1167)
485 TIGR02734 crtI_fam phytoene de 95.5 0.01 2.3E-07 66.6 3.8 32 470-503 1-32 (502)
486 PRK06134 putative FAD-binding 95.5 0.018 3.9E-07 65.6 5.7 60 265-324 216-279 (581)
487 PRK08641 sdhA succinate dehydr 95.5 0.009 1.9E-07 68.1 3.2 37 465-503 1-37 (589)
488 PRK13800 putative oxidoreducta 95.5 0.014 3E-07 70.1 4.6 51 336-389 361-411 (897)
489 PRK08205 sdhA succinate dehydr 95.4 0.015 3.2E-07 66.4 4.6 33 30-65 5-37 (583)
490 PRK09077 L-aspartate oxidase; 95.4 0.015 3.2E-07 65.7 4.6 35 29-66 7-41 (536)
491 TIGR02462 pyranose_ox pyranose 95.4 0.016 3.4E-07 64.6 4.6 36 31-68 1-36 (544)
492 COG0665 DadA Glycine/D-amino a 95.4 0.011 2.4E-07 63.8 3.5 36 466-503 3-38 (387)
493 PRK12843 putative FAD-binding 95.4 0.022 4.7E-07 64.9 5.9 60 265-324 220-283 (578)
494 PLN02976 amine oxidase 95.4 0.017 3.7E-07 69.6 5.1 36 29-66 692-727 (1713)
495 PRK07233 hypothetical protein; 95.4 0.012 2.5E-07 64.8 3.5 33 469-503 1-33 (434)
496 PRK08071 L-aspartate oxidase; 95.4 0.015 3.3E-07 65.1 4.4 34 30-66 3-36 (510)
497 PTZ00383 malate:quinone oxidor 95.4 0.013 2.8E-07 64.9 3.8 38 466-503 44-81 (497)
498 PRK13339 malate:quinone oxidor 95.4 0.014 3.1E-07 64.4 4.1 41 466-506 5-45 (497)
499 PLN02568 polyamine oxidase 95.4 0.013 2.9E-07 65.7 3.8 39 465-503 3-44 (539)
500 PRK05945 sdhA succinate dehydr 95.3 0.012 2.7E-07 66.9 3.6 38 466-503 2-39 (575)
No 1
>KOG3851|consensus
Probab=100.00 E-value=4.6e-62 Score=466.98 Aligned_cols=406 Identities=52% Similarity=0.956 Sum_probs=386.2
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCcccccccccccCCCcEEEEcee
Q psy8791 26 SSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKI 105 (706)
Q Consensus 26 ~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~v 105 (706)
......+|+|||||.+|+++|..+.++++.-+|.+||+.++|+|+|+|..+.+|..+.++......++.+.+..|+++.|
T Consensus 35 ~~~~h~kvLVvGGGsgGi~~A~k~~rkl~~g~vgIvep~e~HyYQPgfTLvGgGl~~l~~srr~~a~liP~~a~wi~ekv 114 (446)
T KOG3851|consen 35 FARKHFKVLVVGGGSGGIGMAAKFYRKLGSGSVGIVEPAEDHYYQPGFTLVGGGLKSLDSSRRKQASLIPKGATWIKEKV 114 (446)
T ss_pred hcccceEEEEEcCCcchhHHHHHHHhhcCCCceEEecchhhcccCcceEEeccchhhhhhccCcccccccCCcHHHHHHH
Confidence 33456799999999999999999999988889999999999999999999999999999998999999999999999999
Q ss_pred EEEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhh
Q psy8791 106 VSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEAL 185 (706)
Q Consensus 106 ~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 185 (706)
++++|++++|.+++|+++.|||||||+|...++..|+| +.+++
T Consensus 115 ~~f~P~~N~v~t~gg~eIsYdylviA~Giql~y~~IkG-------------------------------------l~Eal 157 (446)
T KOG3851|consen 115 KEFNPDKNTVVTRGGEEISYDYLVIAMGIQLDYGKIKG-------------------------------------LVEAL 157 (446)
T ss_pred HhcCCCcCeEEccCCcEEeeeeEeeeeeceeccchhcC-------------------------------------hHhhc
Confidence 99999999999999999999999999999999999999 88999
Q ss_pred cCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCCc
Q psy8791 186 DQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFPS 265 (706)
Q Consensus 186 ~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~~ 265 (706)
+.+ .||++|++..++..++.+.++++|+.++.+++.++.|+|+|++++++.+.+++++|.++++.+.+.++.+.+|+-
T Consensus 158 ~tP--~VcSnYSpkyvdk~y~~~~~fk~GNAIfTfPntpiKCAGAPQKi~yise~y~Rk~gvRd~a~iiy~Tsl~~iFgV 235 (446)
T KOG3851|consen 158 DTP--GVCSNYSPKYVDKVYKELMNFKKGNAIFTFPNTPIKCAGAPQKIMYISESYFRKRGVRDNANIIYNTSLPTIFGV 235 (446)
T ss_pred cCC--CcccccChHHHHHHHHHHHhccCCceEEecCCCccccCCCchhhhhhhHHHHHHhCccccccEEEecCccceecH
Confidence 988 899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCC-c--eEEeecEEEECCCCCchhhhhcCCCCCCCCceeeC
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDK-T--ERLPYAIMHVTPPMGPVPELATSRLVDQSGYVNVD 342 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~-g--~~i~~D~vI~a~G~~~~~~~~~~~l~~~~G~i~vd 342 (706)
+...+.+++..++++|++.....+.++..+++..+++.+++ | ++++++++-+++...+++.++++.+.|..||+.||
T Consensus 236 k~Y~~AL~k~~~~rni~vn~krnLiEV~~~~~~AvFe~L~kPG~t~ei~yslLHv~Ppms~pe~l~~s~~adktGfvdVD 315 (446)
T KOG3851|consen 236 KHYADALEKVIQERNITVNYKRNLIEVRTNDRKAVFENLDKPGVTEEIEYSLLHVTPPMSTPEVLANSDLADKTGFVDVD 315 (446)
T ss_pred HHHHHHHHHHHHhcceEeeeccceEEEeccchhhHHHhcCCCCceeEEeeeeeeccCCCCChhhhhcCcccCcccceecC
Confidence 88999999999999999999999999998888788877764 4 57899999999999999999999999999999999
Q ss_pred ccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCCCCCCcccceeeEEEEecCCeEEEEEEeCCCCc
Q psy8791 343 KATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNRALPHEYNGYTSCPLVTGYSKCVMAEFDYTLKP 422 (706)
Q Consensus 343 ~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 422 (706)
..|+|++.+||||++|||++.|..|+++.+..|..++-+|+...++|+.+...|+|+.+|++.+|.++.++++|+|.-.+
T Consensus 316 ~~TlQs~kypNVFgiGDc~n~PnsKTaAAvaaq~~vv~~nl~~~m~g~~pt~~ydGYtSCPlvtgy~k~iLaeF~yk~~p 395 (446)
T KOG3851|consen 316 QSTLQSKKYPNVFGIGDCMNLPNSKTAAAVAAQSPVVDKNLTQVMQGKRPTMKYDGYTSCPLVTGYNKVILAEFDYKREP 395 (446)
T ss_pred hhhhccccCCCceeeccccCCCchhhHHHHHhcCchhhhhHHHHhcCCCcceeecCcccCceeeccceEEEEeeccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCchhHHHHHHHhhchHHHHHHhhcceecCCCcccccccc
Q psy8791 423 LETFPVDQSKERSLMFQMKKQVMPFLYWNLMLRGYWNGPGVFRQMFHL 470 (706)
Q Consensus 423 ~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i 470 (706)
.++||+++.++++.+++||++++|..||+.|++|+|.++.-.++.+.+
T Consensus 396 ~Etfp~DQsk~r~~~y~mKk~fmP~lYWn~m~rGyW~Gpa~lr~~f~v 443 (446)
T KOG3851|consen 396 KETFPLDQSKPRYSMYLMKKDFMPFLYWNFMVRGYWNGPALLRKHFPV 443 (446)
T ss_pred cccCCccccchHHHHHHHHhhHHHHHHHHHhhhccccCchhhcccccc
Confidence 999999999999999999999999999999999999999877776655
No 2
>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]
Probab=100.00 E-value=8.4e-50 Score=413.97 Aligned_cols=344 Identities=24% Similarity=0.360 Sum_probs=276.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCcccccccccccC-C-CcEEEEceeE
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-S-GATWVKDKIV 106 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~-~v~~i~~~v~ 106 (706)
.+++|||||||+||+.+|..|.+..++.+|||||++++|.|+|+++.+..+..+.+.+..|+..+++ . +++|++++|+
T Consensus 2 ~~~~iVIlGgGfgGl~~a~~l~~~~~~~~itLVd~~~~hl~~plL~eva~g~l~~~~i~~p~~~~~~~~~~v~~~~~~V~ 81 (405)
T COG1252 2 MKKRIVILGGGFGGLSAAKRLARKLPDVEITLVDRRDYHLFTPLLYEVATGTLSESEIAIPLRALLRKSGNVQFVQGEVT 81 (405)
T ss_pred CCceEEEECCcHHHHHHHHHhhhcCCCCcEEEEeCCCccccchhhhhhhcCCCChhheeccHHHHhcccCceEEEEEEEE
Confidence 4679999999999999999999973358999999999999999999999999999999999999987 4 4999999999
Q ss_pred EEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccc-cccCccchhhhh
Q psy8791 107 SFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLD-FLRRPSGLQEAL 185 (706)
Q Consensus 107 ~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~ 185 (706)
+||+++++|++.++.++.||+||+|+|+.++++.+||+ +||+ |.+++++ +.+.++++.+.+
T Consensus 82 ~ID~~~k~V~~~~~~~i~YD~LVvalGs~~~~fgi~G~--~E~a----------------~~lks~edA~~ir~~l~~~f 143 (405)
T COG1252 82 DIDRDAKKVTLADLGEISYDYLVVALGSETNYFGIPGA--AEYA----------------FGLKTLEDALRLRRHLLEAF 143 (405)
T ss_pred EEcccCCEEEeCCCccccccEEEEecCCcCCcCCCCCH--HHhC----------------CCCCCHHHHHHHHHHHHHHH
Confidence 99999999999997789999999999999999999994 5666 4455555 334334443322
Q ss_pred cCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHH-cCCCCCcEEEEEeCCCcCCC
Q psy8791 186 DQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRK-HKKRDAAKLTYCTGMGVLFP 264 (706)
Q Consensus 186 ~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~-~g~~~~~~v~l~~~~~~~~~ 264 (706)
+... .... . +.+. .-+|+++|.++|+.+|.. ...+...+++ .....+++|+++++.+++++
T Consensus 144 e~a~-------~~~~--~--~~~l----ti~IvGgG~TGVElAgeL---~~~~~~l~~~~~~~~~~~~V~LVea~p~ILp 205 (405)
T COG1252 144 EKAS-------QEED--D--RALL----TIVIVGGGPTGVELAGEL---AERLHRLLKKFRVDPSELRVILVEAGPRILP 205 (405)
T ss_pred HHhh-------cccc--c--ccee----EEEEECCChhHHHHHHHH---HHHHHHHhhhhcCCccccEEEEEccCchhcc
Confidence 2110 0000 0 0000 112344444444444431 2222233332 23334789999999999998
Q ss_pred --chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCce-EEeecEEEECCCCCchhhhhc-CCC-CCCCCce
Q psy8791 265 --SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTE-RLPYAIMHVTPPMGPVPELAT-SRL-VDQSGYV 339 (706)
Q Consensus 265 --~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~-~i~~D~vI~a~G~~~~~~~~~-~~l-~~~~G~i 339 (706)
++++++++++.|+++||++++++.|+++++++ +++. +|+ ++++|++|||+|+++++++.+ +++ .|..|++
T Consensus 206 ~~~~~l~~~a~~~L~~~GV~v~l~~~Vt~v~~~~--v~~~---~g~~~I~~~tvvWaaGv~a~~~~~~l~~~e~dr~Grl 280 (405)
T COG1252 206 MFPPKLSKYAERALEKLGVEVLLGTPVTEVTPDG--VTLK---DGEEEIPADTVVWAAGVRASPLLKDLSGLETDRRGRL 280 (405)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEcCCceEEECCCc--EEEc---cCCeeEecCEEEEcCCCcCChhhhhcChhhhccCCCE
Confidence 89999999999999999999999999999877 6654 555 599999999999999999999 577 5778999
Q ss_pred eeCccccccCCCCCEEEccccCCCCC----CchHHHHHHhHHHHHHHHHHHHcCCCC-CCcccceeeEEEEecCCeEEEE
Q psy8791 340 NVDKATLQHVKYSNVFAIGDCSNLPT----SKTAAAVAGQCKVVYDNLSAVMKNRAL-PHEYNGYTSCPLVTGYSKCVMA 414 (706)
Q Consensus 340 ~vd~~~l~~~~~~~Ifa~GD~~~~~~----~~~~~~a~~qg~~~a~ni~~~l~g~~~-~~~~~~~~~~~~~~G~~~~~~~ 414 (706)
.||+ +||++++|||||+|||+..+. |++++.|.+||+++|+||.+.++|+++ +++|..+++++ ++|.+.+++.
T Consensus 281 ~V~~-~L~~~~~~~IFa~GD~A~~~~~~p~P~tAQ~A~Qqg~~~a~ni~~~l~g~~l~~f~y~~~Gtl~-~lG~~~av~~ 358 (405)
T COG1252 281 VVNP-TLQVPGHPDIFAAGDCAAVIDPRPVPPTAQAAHQQGEYAAKNIKARLKGKPLKPFKYKDKGTLA-SLGDFSAVAD 358 (405)
T ss_pred EeCC-CcccCCCCCeEEEeccccCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCCcccceEEEE-EccCCceeEE
Confidence 9999 899999999999999998864 799999999999999999999999888 88999888766 9999998854
Q ss_pred E
Q psy8791 415 E 415 (706)
Q Consensus 415 ~ 415 (706)
.
T Consensus 359 ~ 359 (405)
T COG1252 359 L 359 (405)
T ss_pred e
Confidence 4
No 3
>PTZ00318 NADH dehydrogenase-like protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=362.49 Aligned_cols=351 Identities=17% Similarity=0.256 Sum_probs=262.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCcccccccccccC-CCcEEEEceeEE
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVS 107 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~i~~~v~~ 107 (706)
.+++|||||||+||+.+|..|.+. +++|||||++++++|.|+++.+..+....+.+..++...+. .+++|+.++|++
T Consensus 9 ~~~~vVIvGgG~aGl~~a~~L~~~--~~~ItlI~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~V~~ 86 (424)
T PTZ00318 9 KKPNVVVLGTGWAGAYFVRNLDPK--KYNITVISPRNHMLFTPLLPQTTTGTLEFRSICEPVRPALAKLPNRYLRAVVYD 86 (424)
T ss_pred CCCeEEEECCCHHHHHHHHHhCcC--CCeEEEEcCCCCcchhhhHHHhcccCCChHHhHHHHHHHhccCCeEEEEEEEEE
Confidence 457999999999999999999765 78999999999999999999988888877777777766554 689999999999
Q ss_pred EEcCCCEEEe----------CCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccC
Q psy8791 108 FDPENNRVRT----------QAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRR 177 (706)
Q Consensus 108 id~~~~~v~~----------~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (706)
||++++.|.+ .+|.+++||+||+|||+.+..+.+||.+ ||+ ++.+
T Consensus 87 Id~~~~~v~~~~~~~~~~~~~~g~~i~yD~LViAtGs~~~~~~ipG~~--e~~----------------~~~~------- 141 (424)
T PTZ00318 87 VDFEEKRVKCGVVSKSNNANVNTFSVPYDKLVVAHGARPNTFNIPGVE--ERA----------------FFLK------- 141 (424)
T ss_pred EEcCCCEEEEecccccccccCCceEecCCEEEECCCcccCCCCCCCHH--HcC----------------CCCC-------
Confidence 9999999888 4667899999999999999999999932 222 1122
Q ss_pred ccchhhhhcCCCCCcccCCChhHHHHHHHHHHhc-cCCC---E-E--EecCCCCeeeCChhH--HHHHHHHHHHHHc---
Q psy8791 178 PSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHF-QSGP---V-L--YTFPATPIKCGGAPM--KAVLIGDEYLRKH--- 245 (706)
Q Consensus 178 ~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~-~~g~---~-v--v~~~~~~v~~~g~~~--~~~~~~~~~l~~~--- 245 (706)
+...+..+++.+... .... . . .......+.++|++. |.+....+++++.
T Consensus 142 -------------------~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~GvE~A~~l~~~~~~~~~~ 202 (424)
T PTZ00318 142 -------------------EVNHARGIRKRIVQCIERASLPTTSVEERKRLLHFVVVGGGPTGVEFAAELADFFRDDVRN 202 (424)
T ss_pred -------------------CHHHHHHHHHHHHHHHHHhcCCCCChHHHhccCEEEEECCCHHHHHHHHHHHHHHHHHHHh
Confidence 222223333322211 0000 0 0 000001122344432 4444444444332
Q ss_pred ---CCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCC
Q psy8791 246 ---KKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPP 320 (706)
Q Consensus 246 ---g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G 320 (706)
+.....+|+++++.+.+++ ++.+.+.+++.|+++||+++++++|.+++.+. +++ ++|+++++|++||++|
T Consensus 203 ~~~~~~~~~~Vtlv~~~~~ll~~~~~~~~~~~~~~L~~~gV~v~~~~~v~~v~~~~--v~~---~~g~~i~~d~vi~~~G 277 (424)
T PTZ00318 203 LNPELVEECKVTVLEAGSEVLGSFDQALRKYGQRRLRRLGVDIRTKTAVKEVLDKE--VVL---KDGEVIPTGLVVWSTG 277 (424)
T ss_pred hhhcccccCEEEEEcCCCcccccCCHHHHHHHHHHHHHCCCEEEeCCeEEEEeCCE--EEE---CCCCEEEccEEEEccC
Confidence 1224568999999988876 67889999999999999999999999998653 554 3788999999999999
Q ss_pred CCchhhhhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCC---CCchHHHHHHhHHHHHHHHHHHHcCCC-C-CC
Q psy8791 321 MGPVPELATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLP---TSKTAAAVAGQCKVVYDNLSAVMKNRA-L-PH 394 (706)
Q Consensus 321 ~~~~~~~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~---~~~~~~~a~~qg~~~a~ni~~~l~g~~-~-~~ 394 (706)
.+|++++..+++ .+++|+|.||+ +||.+++|||||+|||+..+ .|++++.|++||+++|+||.+.+.|++ + ++
T Consensus 278 ~~~~~~~~~~~l~~~~~G~I~Vd~-~l~~~~~~~IfAiGD~a~~~~~~~~~~~~~A~~qg~~~A~ni~~~l~g~~~~~~~ 356 (424)
T PTZ00318 278 VGPGPLTKQLKVDKTSRGRISVDD-HLRVKPIPNVFALGDCAANEERPLPTLAQVASQQGVYLAKEFNNELKGKPMSKPF 356 (424)
T ss_pred CCCcchhhhcCCcccCCCcEEeCC-CcccCCCCCEEEEeccccCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 999998888887 67789999999 79989999999999999863 467899999999999999999999986 3 66
Q ss_pred cccceeeEEEEecCCeEEEEEEeCCCCcccCCCCCCCCchhHHHHHHHhh
Q psy8791 395 EYNGYTSCPLVTGYSKCVMAEFDYTLKPLETFPVDQSKERSLMFQMKKQV 444 (706)
Q Consensus 395 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 444 (706)
.|...+. ++++|.+.|++.... + ...+++.|++++..
T Consensus 357 ~~~~~g~-~~~lG~~~av~~~~~--------~----~~~g~~a~~~~~~~ 393 (424)
T PTZ00318 357 VYRSLGS-LAYLGNYSAIVQLGA--------F----DLSGFKALLFWRSA 393 (424)
T ss_pred eecCCce-EEEecCCceEEEcCC--------c----eEecHHHHHHHHHH
Confidence 6666654 469999999854321 1 12456677776543
No 4
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein. Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.
Probab=100.00 E-value=5.4e-39 Score=344.18 Aligned_cols=347 Identities=21% Similarity=0.299 Sum_probs=258.7
Q ss_pred cEEEECCCHHHHHHHHHHHhh-cCCCeEEEEcCCCCcccCcccccccCccccCcccccccccccC-CCcEEEEceeEEEE
Q psy8791 32 KLLVVGGGAAGCSMAAKFTSK-LGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVSFD 109 (706)
Q Consensus 32 ~VvIIGgG~aGl~aA~~L~~~-~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~i~~~v~~id 109 (706)
+|||||||+||+.+|.+|+++ .++++|+|||+++++.|.|.++.+..+..+.+++..++.+++. .+++|+.++|++||
T Consensus 1 ~vvIiGgG~aG~~~a~~l~~~~~~~~~I~li~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~~v~~id 80 (364)
T TIGR03169 1 HLVLIGGGHTHALVLRRWAMKPLPGVRVTLINPSSTTPYSGMLPGMIAGHYSLDEIRIDLRRLARQAGARFVIAEATGID 80 (364)
T ss_pred CEEEECCcHHHHHHHHHhcCcCCCCCEEEEECCCCCCcccchhhHHHheeCCHHHhcccHHHHHHhcCCEEEEEEEEEEe
Confidence 599999999999999999765 3578999999999999999888776666666777777776655 68999999999999
Q ss_pred cCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCC
Q psy8791 110 PENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPD 189 (706)
Q Consensus 110 ~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 189 (706)
+++++|.+++|+++.||+||+|||+.+..+.+||.. |+.
T Consensus 81 ~~~~~V~~~~g~~~~yD~LviAtG~~~~~~~i~g~~--~~~--------------------------------------- 119 (364)
T TIGR03169 81 PDRRKVLLANRPPLSYDVLSLDVGSTTPLSGVEGAA--DLA--------------------------------------- 119 (364)
T ss_pred cccCEEEECCCCcccccEEEEccCCCCCCCCCCccc--ccc---------------------------------------
Confidence 999999999998999999999999999999999821 111
Q ss_pred CCcccCCChhHHHHHHHHHHh-c---cCCCEEEecCCCCeeeCCh--hHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCC
Q psy8791 190 SGVSTNYSPQYVEKTLRNLQH-F---QSGPVLYTFPATPIKCGGA--PMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLF 263 (706)
Q Consensus 190 ~~v~~~~~~~~~~~~~~~l~~-~---~~g~~vv~~~~~~v~~~g~--~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~ 263 (706)
....+.+.+...++.+.. + .+++.+ +.++|+ +.|.+..+..++++.+.+ .+|+++ ..+.++
T Consensus 120 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-------vVvG~G~~g~E~A~~l~~~~~~~g~~--~~V~li-~~~~~l 186 (364)
T TIGR03169 120 ---VPVKPIENFLARWEALLESADAPPGTKRL-------AVVGGGAAGVEIALALRRRLPKRGLR--GQVTLI-AGASLL 186 (364)
T ss_pred ---cccCCHHHHHHHHHHHHHHHhcCCCCceE-------EEECCCHHHHHHHHHHHHHHHhcCCC--ceEEEE-eCCccc
Confidence 111222333333332321 1 122222 122333 345555555556556532 357888 445555
Q ss_pred C--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhcCCC-CCCCCcee
Q psy8791 264 P--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELATSRL-VDQSGYVN 340 (706)
Q Consensus 264 ~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~~l-~~~~G~i~ 340 (706)
+ ++.+.+.+++.|+++||++++++.+.+++.+ .+.+ ++|+++++|.+|+|+|.+|++++..+++ .+++|++.
T Consensus 187 ~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~--~v~~---~~g~~i~~D~vi~a~G~~p~~~l~~~gl~~~~~g~i~ 261 (364)
T TIGR03169 187 PGFPAKVRRLVLRLLARRGIEVHEGAPVTRGPDG--ALIL---ADGRTLPADAILWATGARAPPWLAESGLPLDEDGFLR 261 (364)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEeCCeeEEEcCC--eEEe---CCCCEEecCEEEEccCCChhhHHHHcCCCcCCCCeEE
Confidence 4 5778889999999999999999999999754 3444 3788999999999999999998888877 67789999
Q ss_pred eCccccccCCCCCEEEccccCCCC---CCchHHHHHHhHHHHHHHHHHHHcCCCC-CCcccceeeEEEEecCCeEEEEEE
Q psy8791 341 VDKATLQHVKYSNVFAIGDCSNLP---TSKTAAAVAGQCKVVYDNLSAVMKNRAL-PHEYNGYTSCPLVTGYSKCVMAEF 416 (706)
Q Consensus 341 vd~~~l~~~~~~~Ifa~GD~~~~~---~~~~~~~a~~qg~~~a~ni~~~l~g~~~-~~~~~~~~~~~~~~G~~~~~~~~~ 416 (706)
||+ ++|.+++|||||+|||+..+ .++.+..|.+||+++|+||.+.+.|+++ ++.+.....|++++|.+.+++...
T Consensus 262 vd~-~l~~~~~~~Iya~GD~~~~~~~~~~~~~~~A~~~g~~~a~ni~~~l~g~~~~~~~~~~~~~~~~~~G~~~~v~~~~ 340 (364)
T TIGR03169 262 VDP-TLQSLSHPHVFAAGDCAVITDAPRPKAGVYAVRQAPILAANLRASLRGQPLRPFRPQRDYLQLLNTGDRRAVASWG 340 (364)
T ss_pred ECC-ccccCCCCCEEEeeeeeecCCCCCCCchHHHHHhHHHHHHHHHHHhcCCCCCCCcccccceeEEEcCCCcEEEeec
Confidence 999 79977999999999999753 4678889999999999999999999876 332222356889999999874221
Q ss_pred eCCCCcccCCCCCCCCchhHHHHHHHhhchHHHH
Q psy8791 417 DYTLKPLETFPVDQSKERSLMFQMKKQVMPFLYW 450 (706)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~ 450 (706)
+ + ..++++.|++|..+..++.|
T Consensus 341 ---~-----~----~~~~~~~~~~k~~~~~~~~~ 362 (364)
T TIGR03169 341 ---W-----I----IGPGRWLWRLKDWIDRRFMR 362 (364)
T ss_pred ---c-----e----eecCccHHHHHHHHhHHHHh
Confidence 1 1 12456788888755544333
No 5
>KOG2495|consensus
Probab=100.00 E-value=5e-36 Score=300.55 Aligned_cols=349 Identities=20% Similarity=0.344 Sum_probs=266.4
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCcccccccccccC---CCcEEEE
Q psy8791 26 SSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP---SGATWVK 102 (706)
Q Consensus 26 ~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~i~ 102 (706)
+...+++|||+|.|.+|.+.+..|... .++|++|+|++||.|.|++|....|.....++..|...+.+ .+++|.+
T Consensus 51 ~~~kKk~vVVLGsGW~a~S~lk~ldts--~YdV~vVSPRnyFlFTPLLpS~~vGTve~rSIvEPIr~i~r~k~~~~~y~e 128 (491)
T KOG2495|consen 51 NGGKKKRVVVLGSGWGAISLLKKLDTS--LYDVTVVSPRNYFLFTPLLPSTTVGTVELRSIVEPIRAIARKKNGEVKYLE 128 (491)
T ss_pred CCCCCceEEEEcCchHHHHHHHhcccc--ccceEEeccccceEEeeccCCccccceeehhhhhhHHHHhhccCCCceEEe
Confidence 334568999999999999999999877 79999999999999999999999999999999999888776 3788999
Q ss_pred ceeEEEEcCCCEEEeC----CC----eEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCcccccc
Q psy8791 103 DKIVSFDPENNRVRTQ----AG----SEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDF 174 (706)
Q Consensus 103 ~~v~~id~~~~~v~~~----~g----~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (706)
++.+.||++++.|..+ ++ ..+.|||||+|+|+.++.+++||+. ||+ .|+ .+..++
T Consensus 129 Aec~~iDp~~k~V~~~s~t~~~~~~e~~i~YDyLViA~GA~~~TFgipGV~--e~~----~FL-----------KEv~dA 191 (491)
T KOG2495|consen 129 AECTKIDPDNKKVHCRSLTADSSDKEFVIGYDYLVIAVGAEPNTFGIPGVE--ENA----HFL-----------KEVEDA 191 (491)
T ss_pred cccEeecccccEEEEeeeccCCCcceeeecccEEEEeccCCCCCCCCCchh--hch----hhh-----------hhhhHH
Confidence 9999999999987764 33 4689999999999999999999964 544 333 233345
Q ss_pred ccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHc--CCCCCcE
Q psy8791 175 LRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKH--KKRDAAK 252 (706)
Q Consensus 175 ~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~--g~~~~~~ 252 (706)
+++++.+.+.+.... . +.--+..++++..+ +||++|+++++.++.... -..+-+++. ...++++
T Consensus 192 qeIR~~~~~~le~a~--~-----~~l~~eerkRlLh~----VVVGGGPTGVEFAaEL~D---fi~~Dl~k~yp~l~~~i~ 257 (491)
T KOG2495|consen 192 QEIRRKVIDNLEKAE--L-----PGLSDEERKRLLHF----VVVGGGPTGVEFAAELAD---FIPEDLRKIYPELKKDIK 257 (491)
T ss_pred HHHHHHHHHHHHHhh--c-----CCCChHHhhheEEE----EEECCCCcceeehHHHHH---HHHHHHHHhhhcchhheE
Confidence 565555555554431 1 11112344555555 366777777777654221 111122222 2457789
Q ss_pred EEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCc--eEEeecEEEECCCCCchhhhh
Q psy8791 253 LTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKT--ERLPYAIMHVTPPMGPVPELA 328 (706)
Q Consensus 253 v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g--~~i~~D~vI~a~G~~~~~~~~ 328 (706)
|++++..+.+++ ++.+.+++++.+.+.||++++++.|..++++. +...+. +| +++|+-+++|+||..|.+...
T Consensus 258 vtLiEA~d~iL~mFdkrl~~yae~~f~~~~I~~~~~t~Vk~V~~~~--I~~~~~-~g~~~~iPYG~lVWatG~~~rp~~k 334 (491)
T KOG2495|consen 258 VTLIEAADHILNMFDKRLVEYAENQFVRDGIDLDTGTMVKKVTEKT--IHAKTK-DGEIEEIPYGLLVWATGNGPRPVIK 334 (491)
T ss_pred EEeeccchhHHHHHHHHHHHHHHHHhhhccceeecccEEEeecCcE--EEEEcC-CCceeeecceEEEecCCCCCchhhh
Confidence 999999999987 78899999999999999999999999998765 555433 34 689999999999999998877
Q ss_pred cCCC-CCCCC--ceeeCccccccCCCCCEEEccccCCCC-CCchHHHHHHhHHHHHHHHHHHHcCCC-------------
Q psy8791 329 TSRL-VDQSG--YVNVDKATLQHVKYSNVFAIGDCSNLP-TSKTAAAVAGQCKVVYDNLSAVMKNRA------------- 391 (706)
Q Consensus 329 ~~~l-~~~~G--~i~vd~~~l~~~~~~~Ifa~GD~~~~~-~~~~~~~a~~qg~~~a~ni~~~l~g~~------------- 391 (706)
..-. .++.| .+.||+ .||+++.+||||+|||+..+ .+++++.|.+||+++|+|+..+.++..
T Consensus 335 ~lm~~i~e~~rr~L~vDE-~LrV~G~~nvfAiGDca~~~~~~~tAQVA~QqG~yLAk~fn~m~k~~~~~e~~~~r~~~~~ 413 (491)
T KOG2495|consen 335 DLMKQIDEQGRRGLAVDE-WLRVKGVKNVFAIGDCADQRGLKPTAQVAEQQGAYLAKNFNKMGKGGNLPEGPSARLRGEG 413 (491)
T ss_pred hHhhcCCccCceeeeeec-eeeccCcCceEEeccccccccCccHHHHHHHHHHHHHHHHHHHhcccCCCccchhhhhhhh
Confidence 6532 44445 799999 79999999999999999554 355999999999999999988765321
Q ss_pred ----CCCcccceeeEEEEecCCeEE
Q psy8791 392 ----LPHEYNGYTSCPLVTGYSKCV 412 (706)
Q Consensus 392 ----~~~~~~~~~~~~~~~G~~~~~ 412 (706)
.|++|+..+... ++|...++
T Consensus 414 ~~~f~PF~Y~H~GalA-~lG~ekai 437 (491)
T KOG2495|consen 414 RHQFKPFKYKHLGALA-YLGREKAI 437 (491)
T ss_pred hhccCCccccccccee-eccccchh
Confidence 245566655544 88888877
No 6
>PRK09564 coenzyme A disulfide reductase; Reviewed
Probab=100.00 E-value=8.7e-32 Score=296.26 Aligned_cols=293 Identities=20% Similarity=0.231 Sum_probs=214.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCc-ccccccCccccC-cc-cccccccccCCCcEEEE-ceeE
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQP-MFTLIGGGMKKL-SD-SRRPMKSVLPSGATWVK-DKIV 106 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p-~~~~~~~~~~~~-~~-~~~~~~~~~~~~v~~i~-~~v~ 106 (706)
++|||||||+||++||..|++..++.+|||||+++++.|.| .+++...+.... +. +......+...++++.. ++|+
T Consensus 1 ~~vvIIGgG~aGl~aA~~l~~~~~~~~Vtli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~V~ 80 (444)
T PRK09564 1 MKIIIIGGTAAGMSAAAKAKRLNKELEITVYEKTDIVSFGACGLPYFVGGFFDDPNTMIARTPEEFIKSGIDVKTEHEVV 80 (444)
T ss_pred CeEEEECCcHHHHHHHHHHHHHCCCCcEEEEECCCcceeecCCCceEeccccCCHHHhhcCCHHHHHHCCCeEEecCEEE
Confidence 47999999999999999999986668999999999988875 455554443222 22 22333444457899864 7999
Q ss_pred EEEcCCCEEEeCC---CeEEE--ecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccch
Q psy8791 107 SFDPENNRVRTQA---GSEIS--YEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGL 181 (706)
Q Consensus 107 ~id~~~~~v~~~~---g~~~~--yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 181 (706)
+||++++.|.+.+ +..+. ||+||+|||+.+..|++||.+ .
T Consensus 81 ~id~~~~~v~~~~~~~~~~~~~~yd~lviAtG~~~~~~~i~g~~-----------------------------------~ 125 (444)
T PRK09564 81 KVDAKNKTITVKNLKTGSIFNDTYDKLMIATGARPIIPPIKNIN-----------------------------------L 125 (444)
T ss_pred EEECCCCEEEEEECCCCCEEEecCCEEEECCCCCCCCCCCCCcC-----------------------------------C
Confidence 9999999888764 55666 999999999999888888831 0
Q ss_pred hhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCc
Q psy8791 182 QEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGV 261 (706)
Q Consensus 182 ~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~ 261 (706)
. .+.+..+...+.++.+.+......++++ ++|++. +......+++.|. +|++++..+.
T Consensus 126 ------~--~v~~~~~~~~~~~l~~~l~~~~~~~vvV--------vGgG~~--g~e~A~~l~~~g~----~Vtli~~~~~ 183 (444)
T PRK09564 126 ------E--NVYTLKSMEDGLALKELLKDEEIKNIVI--------IGAGFI--GLEAVEAAKHLGK----NVRIIQLEDR 183 (444)
T ss_pred ------C--CEEEECCHHHHHHHHHHHhhcCCCEEEE--------ECCCHH--HHHHHHHHHhcCC----cEEEEeCCcc
Confidence 0 1222233344445555554433333322 333332 2223335666664 4889998887
Q ss_pred CCC---chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch-hhhhcCCC-CCCC
Q psy8791 262 LFP---SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV-PELATSRL-VDQS 336 (706)
Q Consensus 262 ~~~---~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~-~~~~~~~l-~~~~ 336 (706)
+++ ++++.+.+++.|+++||++++++++.+++.+++ +....+ ++.++++|.+|+|+|.+|+ ++++++++ .+++
T Consensus 184 ~l~~~~~~~~~~~l~~~l~~~gI~v~~~~~v~~i~~~~~-~~~v~~-~~~~i~~d~vi~a~G~~p~~~~l~~~gl~~~~~ 261 (444)
T PRK09564 184 ILPDSFDKEITDVMEEELRENGVELHLNEFVKSLIGEDK-VEGVVT-DKGEYEADVVIVATGVKPNTEFLEDTGLKTLKN 261 (444)
T ss_pred cCchhcCHHHHHHHHHHHHHCCCEEEcCCEEEEEecCCc-EEEEEe-CCCEEEcCEEEECcCCCcCHHHHHhcCccccCC
Confidence 764 578889999999999999999999999976544 322223 4457999999999999998 67777888 6778
Q ss_pred CceeeCccccccCCCCCEEEccccCCCCC--------CchHHHHHHhHHHHHHHHH
Q psy8791 337 GYVNVDKATLQHVKYSNVFAIGDCSNLPT--------SKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 337 G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~--------~~~~~~a~~qg~~~a~ni~ 384 (706)
|+|.||+ +++ |++|||||+|||+..+. +++++.|..||+++|+||.
T Consensus 262 g~i~vd~-~~~-t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~qg~~~a~ni~ 315 (444)
T PRK09564 262 GAIIVDE-YGE-TSIENIYAAGDCATIYNIVSNKNVYVPLATTANKLGRMVGENLA 315 (444)
T ss_pred CCEEECC-Ccc-cCCCCEEEeeeEEEEEeccCCCeeeccchHHHHHHHHHHHHHhc
Confidence 9999999 688 79999999999997532 4678899999999999995
No 7
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=100.00 E-value=4.5e-32 Score=296.27 Aligned_cols=288 Identities=16% Similarity=0.160 Sum_probs=210.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCc-ccccccCccccCcc--cccccccccC-CCcEEEE-ce
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQP-MFTLIGGGMKKLSD--SRRPMKSVLP-SGATWVK-DK 104 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p-~~~~~~~~~~~~~~--~~~~~~~~~~-~~v~~i~-~~ 104 (706)
+++|||||||+||++||..|++..++++|+|||+++++.|.+ ++++...+...... +..+.+.+.. .++++.. ++
T Consensus 1 m~~VVIIGgG~aG~~aA~~l~~~~~~~~I~li~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~ 80 (438)
T PRK13512 1 MPKIIVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYYIGEVVEDRKYALAYTPEKFYDRKQITVKTYHE 80 (438)
T ss_pred CCeEEEECCcHHHHHHHHHHHhhCCCCCEEEEECCCCcccccCCcchhhcCccCCHHHcccCCHHHHHHhCCCEEEeCCE
Confidence 358999999999999999999877789999999999988885 66766544433222 2222234433 6899865 89
Q ss_pred eEEEEcCCCEEEeCCC---e--EEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCcc
Q psy8791 105 IVSFDPENNRVRTQAG---S--EISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPS 179 (706)
Q Consensus 105 v~~id~~~~~v~~~~g---~--~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (706)
|++||+++++|.+.++ . ++.||+||||||+.+..|++++ +
T Consensus 81 V~~Id~~~~~v~~~~~~~~~~~~~~yd~lviAtGs~~~~~~~~~----~------------------------------- 125 (438)
T PRK13512 81 VIAINDERQTVTVLNRKTNEQFEESYDKLILSPGASANSLGFES----D------------------------------- 125 (438)
T ss_pred EEEEECCCCEEEEEECCCCcEEeeecCEEEECCCCCCCCCCCCC----C-------------------------------
Confidence 9999999999888653 2 4689999999999987665543 0
Q ss_pred chhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCC
Q psy8791 180 GLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGM 259 (706)
Q Consensus 180 ~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~ 259 (706)
.+....+...+..+.+.+......+++ .++|+.. +......+++.|. +|+++++.
T Consensus 126 -----------~~~~~~~~~~~~~l~~~l~~~~~~~vv--------ViGgG~i--g~E~A~~l~~~g~----~Vtli~~~ 180 (438)
T PRK13512 126 -----------ITFTLRNLEDTDAIDQFIKANQVDKAL--------VVGAGYI--SLEVLENLYERGL----HPTLIHRS 180 (438)
T ss_pred -----------CeEEecCHHHHHHHHHHHhhcCCCEEE--------EECCCHH--HHHHHHHHHhCCC----cEEEEecc
Confidence 111122233344444444333222222 2333322 2223345666664 49999998
Q ss_pred CcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch-hhhhcCCC-CCC
Q psy8791 260 GVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV-PELATSRL-VDQ 335 (706)
Q Consensus 260 ~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~-~~~~~~~l-~~~ 335 (706)
+.+++ ++++.+.+++.|+++||+++++++|.+++.. .+++ ++|+++++|.|++|+|.+|| +++.+.++ .++
T Consensus 181 ~~l~~~~d~~~~~~l~~~l~~~gI~i~~~~~v~~i~~~--~v~~---~~g~~~~~D~vl~a~G~~pn~~~l~~~gl~~~~ 255 (438)
T PRK13512 181 DKINKLMDADMNQPILDELDKREIPYRLNEEIDAINGN--EVTF---KSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDD 255 (438)
T ss_pred cccchhcCHHHHHHHHHHHHhcCCEEEECCeEEEEeCC--EEEE---CCCCEEEeCEEEECcCCCcChHHHHhcCcccCC
Confidence 88775 6788999999999999999999999999753 3544 36778999999999999999 56777787 677
Q ss_pred CCceeeCccccccCCCCCEEEccccCCCC--------CCchHHHHHHhHHHHHHHHH
Q psy8791 336 SGYVNVDKATLQHVKYSNVFAIGDCSNLP--------TSKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 336 ~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~--------~~~~~~~a~~qg~~~a~ni~ 384 (706)
+|++.||+ ++| |++|||||+|||+..+ .+++++.|..||+++|+||.
T Consensus 256 ~G~i~Vd~-~~~-t~~~~IyA~GD~~~~~~~~~~~~~~~~la~~A~~~a~~~a~ni~ 310 (438)
T PRK13512 256 KGFIPVND-KFE-TNVPNIYAIGDIITSHYRHVDLPASVPLAWGAHRAASIVAEQIA 310 (438)
T ss_pred CCcEEECC-Ccc-cCCCCEEEeeeeEEeeeccCCCceecccchHHHHHHHHHHHHhc
Confidence 89999999 688 8999999999998632 23567789999999999994
No 8
>PRK14989 nitrite reductase subunit NirD; Provisional
Probab=100.00 E-value=8.4e-31 Score=302.56 Aligned_cols=293 Identities=15% Similarity=0.209 Sum_probs=217.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhc--CCCeEEEEcCCCCcccCcc-cccccCccccCccccccccccc-CCCcEEEEc-e
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKL--GKGQVSIVEPTDDHYYQPM-FTLIGGGMKKLSDSRRPMKSVL-PSGATWVKD-K 104 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~--~~~~Vtlie~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~-~~~v~~i~~-~ 104 (706)
+++|||||||+||+++|..|+++. ++++||||++++++.|.+. ++....+ ...+++.....+++ ..+++++.+ +
T Consensus 3 ~~kIVIVG~G~AG~~aa~~L~~~~~~~~~~Itvi~~e~~~~Y~r~~L~~~~~~-~~~~~l~~~~~~~~~~~gI~~~~g~~ 81 (847)
T PRK14989 3 KVRLAIIGNGMVGHRFIEDLLDKADAANFDITVFCEEPRIAYDRVHLSSYFSH-HTAEELSLVREGFYEKHGIKVLVGER 81 (847)
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCCCCCCeEEEEECCCCCcccCCcchHhHcC-CCHHHccCCCHHHHHhCCCEEEcCCE
Confidence 358999999999999999998763 4689999999999887754 4444333 23444444444433 479999885 6
Q ss_pred eEEEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhh
Q psy8791 105 IVSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEA 184 (706)
Q Consensus 105 v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 184 (706)
|+.||++.+.|.+.+|.++.||+||+|||+.+..|++||.+ .+
T Consensus 82 V~~Id~~~~~V~~~~G~~i~yD~LVIATGs~p~~p~ipG~~-----------------~~-------------------- 124 (847)
T PRK14989 82 AITINRQEKVIHSSAGRTVFYDKLIMATGSYPWIPPIKGSE-----------------TQ-------------------- 124 (847)
T ss_pred EEEEeCCCcEEEECCCcEEECCEEEECCCCCcCCCCCCCCC-----------------CC--------------------
Confidence 99999999999999998999999999999999999999932 00
Q ss_pred hcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC
Q psy8791 185 LDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP 264 (706)
Q Consensus 185 ~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~ 264 (706)
.+....+.+.+..+.+.+.. ++ ..++++|+.. +..++..+++.|. +|++++..+.+++
T Consensus 125 ------~v~~~rt~~d~~~l~~~~~~---~k-------~vvVIGgG~i--GlE~A~~L~~~G~----~VtvVe~~~~ll~ 182 (847)
T PRK14989 125 ------DCFVYRTIEDLNAIEACARR---SK-------RGAVVGGGLL--GLEAAGALKNLGV----ETHVIEFAPMLMA 182 (847)
T ss_pred ------CeEEECCHHHHHHHHHHHhc---CC-------eEEEECCCHH--HHHHHHHHHHcCC----eEEEEeccccchh
Confidence 11112233344444333221 11 1233444432 3333455666764 4999999988775
Q ss_pred ---chhHHHHHHHHHHhCCceEEcCCceEEEeCCC-CEEEEEeCCCceEEeecEEEECCCCCchhhh-hcCCC-CCCCCc
Q psy8791 265 ---SPFYAEKIHDILIGRGVDVHKGKALVEIDLAN-KEAVFKSEDKTERLPYAIMHVTPPMGPVPEL-ATSRL-VDQSGY 338 (706)
Q Consensus 265 ---~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~-~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~-~~~~l-~~~~G~ 338 (706)
++...+.+++.|+++||+++++..+++|..++ ..+..+..++|+++++|+||+++|++|++.+ ..+|+ .+++|+
T Consensus 183 ~~ld~~~~~~l~~~L~~~GV~v~~~~~v~~I~~~~~~~~~~v~~~dG~~i~~D~Vv~A~G~rPn~~L~~~~Gl~~~~~G~ 262 (847)
T PRK14989 183 EQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGVEARKTMRFADGSELEVDFIVFSTGIRPQDKLATQCGLAVAPRGG 262 (847)
T ss_pred hhcCHHHHHHHHHHHHHCCCEEEcCCeEEEEEecCCCceEEEEECCCCEEEcCEEEECCCcccCchHHhhcCccCCCCCc
Confidence 67888999999999999999999999997542 2222233458899999999999999999654 45788 688899
Q ss_pred eeeCccccccCCCCCEEEccccCCCCCC--chHHHHHHhHHHHHHHHH
Q psy8791 339 VNVDKATLQHVKYSNVFAIGDCSNLPTS--KTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 339 i~vd~~~l~~~~~~~Ifa~GD~~~~~~~--~~~~~a~~qg~~~a~ni~ 384 (706)
|.||+ ++| |+.|||||+|||+..+.. .++..|..||+++|+||.
T Consensus 263 I~VD~-~l~-Ts~p~IYAiGD~a~~~~~~~gl~~~a~~~a~vaa~~i~ 308 (847)
T PRK14989 263 IVIND-SCQ-TSDPDIYAIGECASWNNRVFGLVAPGYKMAQVAVDHLL 308 (847)
T ss_pred EEECC-CCc-CCCCCEEEeecceeEcCcccccHHHHHHHHHHHHHHhc
Confidence 99999 688 899999999999987543 367789999999999994
No 9
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional
Probab=100.00 E-value=1.2e-30 Score=280.43 Aligned_cols=288 Identities=15% Similarity=0.230 Sum_probs=209.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCccc-CcccccccCccccCccccc-cccccc-CCCcEEEE-ceeE
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYY-QPMFTLIGGGMKKLSDSRR-PMKSVL-PSGATWVK-DKIV 106 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~-~p~~~~~~~~~~~~~~~~~-~~~~~~-~~~v~~i~-~~v~ 106 (706)
++|||||||+||+++|..|++..++.+||||++++++.| .|.++....+....+++.. ...++. ..+++++. ++|+
T Consensus 3 ~~vvIiG~G~AG~~~a~~lr~~~~~~~Itvi~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~V~ 82 (377)
T PRK04965 3 NGIVIIGSGFAARQLVKNIRKQDAHIPITLITADSGDEYNKPDLSHVFSQGQRADDLTRQSAGEFAEQFNLRLFPHTWVT 82 (377)
T ss_pred CCEEEECCcHHHHHHHHHHHhhCcCCCEEEEeCCCCCCcCcCcCcHHHhCCCCHHHhhcCCHHHHHHhCCCEEECCCEEE
Confidence 589999999999999999999877889999999998666 5666655544444444443 344443 36899885 6899
Q ss_pred EEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhc
Q psy8791 107 SFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALD 186 (706)
Q Consensus 107 ~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 186 (706)
++|++++.+.+ ++.++.||+||+|||+.+..|++||.+ +
T Consensus 83 ~id~~~~~v~~-~~~~~~yd~LVlATG~~~~~p~i~G~~---~------------------------------------- 121 (377)
T PRK04965 83 DIDAEAQVVKS-QGNQWQYDKLVLATGASAFVPPIPGRE---L------------------------------------- 121 (377)
T ss_pred EEECCCCEEEE-CCeEEeCCEEEECCCCCCCCCCCCCCc---e-------------------------------------
Confidence 99999888886 456899999999999999988999832 0
Q ss_pred CCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--
Q psy8791 187 QPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP-- 264 (706)
Q Consensus 187 ~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~-- 264 (706)
+....+...+......+. .++.+ +.++|++. ++.....+.+.+. +|+++++.+.+++
T Consensus 122 -----v~~~~~~~~~~~~~~~~~---~~~~v-------vViGgG~~--g~e~A~~L~~~g~----~Vtlv~~~~~~l~~~ 180 (377)
T PRK04965 122 -----MLTLNSQQEYRAAETQLR---DAQRV-------LVVGGGLI--GTELAMDLCRAGK----AVTLVDNAASLLASL 180 (377)
T ss_pred -----EEEECCHHHHHHHHHHhh---cCCeE-------EEECCCHH--HHHHHHHHHhcCC----eEEEEecCCcccchh
Confidence 011111222222222221 12112 22344432 2223334555553 5999999888764
Q ss_pred -chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchh-hhhcCCCCCCCCceeeC
Q psy8791 265 -SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVP-ELATSRLVDQSGYVNVD 342 (706)
Q Consensus 265 -~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~-~~~~~~l~~~~G~i~vd 342 (706)
++.+...+++.|++.||++++++.+.+++.+++.+.+ .+++|+++++|++|+|+|.+|+. ++..+++..++| +.||
T Consensus 181 ~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v-~~~~g~~i~~D~vI~a~G~~p~~~l~~~~gl~~~~g-i~vd 258 (377)
T PRK04965 181 MPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGIRA-TLDSGRSIEVDAVIAAAGLRPNTALARRAGLAVNRG-IVVD 258 (377)
T ss_pred CCHHHHHHHHHHHHhCCCEEEECCeEEEEEccCCEEEE-EEcCCcEEECCEEEECcCCCcchHHHHHCCCCcCCC-EEEC
Confidence 5678889999999999999999999999876554433 34578899999999999999995 455678855556 9999
Q ss_pred ccccccCCCCCEEEccccCCCCCC--chHHHHHHhHHHHHHHHH
Q psy8791 343 KATLQHVKYSNVFAIGDCSNLPTS--KTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 343 ~~~l~~~~~~~Ifa~GD~~~~~~~--~~~~~a~~qg~~~a~ni~ 384 (706)
+ +++ |+.|||||+|||+..+.. ..++.|..||+.+|+||.
T Consensus 259 ~-~l~-ts~~~VyA~GD~a~~~~~~~~~~~~a~~~g~~~a~n~~ 300 (377)
T PRK04965 259 S-YLQ-TSAPDIYALGDCAEINGQVLPFLQPIQLSAMALAKNLL 300 (377)
T ss_pred C-Ccc-cCCCCEEEeeecEeECCceeehHHHHHHHHHHHHHHhc
Confidence 9 788 789999999999986532 356678999999999994
No 10
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Probab=100.00 E-value=1.8e-30 Score=280.62 Aligned_cols=291 Identities=12% Similarity=0.100 Sum_probs=207.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-ccccc-ccCccccCcccccccccccCCCcEEEEc-eeE
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-PMFTL-IGGGMKKLSDSRRPMKSVLPSGATWVKD-KIV 106 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-p~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~i~~-~v~ 106 (706)
.++|||||||+||++||..|+++.+..+|+||++++++.|. |.++. +..+.........+...+...+++++.+ +|+
T Consensus 3 ~~~vvIIGgG~AG~~aA~~Lr~~~~~~~I~li~~e~~~~y~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~V~ 82 (396)
T PRK09754 3 EKTIIIVGGGQAAAMAAASLRQQGFTGELHLFSDERHLPYERPPLSKSMLLEDSPQLQQVLPANWWQENNVHLHSGVTIK 82 (396)
T ss_pred cCcEEEECChHHHHHHHHHHHhhCCCCCEEEeCCCCCCCCCCCCCCHHHHCCCCccccccCCHHHHHHCCCEEEcCCEEE
Confidence 35899999999999999999998556699999999987764 44432 2222211111222333344578999876 689
Q ss_pred EEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhc
Q psy8791 107 SFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALD 186 (706)
Q Consensus 107 ~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 186 (706)
.+|++++.|.+++|.++.||+||+|||+.++.+++++.. . +
T Consensus 83 ~id~~~~~v~~~~g~~~~yd~LViATGs~~~~~p~~~~~----~-------------~---------------------- 123 (396)
T PRK09754 83 TLGRDTRELVLTNGESWHWDQLFIATGAAARPLPLLDAL----G-------------E---------------------- 123 (396)
T ss_pred EEECCCCEEEECCCCEEEcCEEEEccCCCCCCCCCCCcC----C-------------C----------------------
Confidence 999999999999998999999999999998776665510 0 0
Q ss_pred CCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--
Q psy8791 187 QPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP-- 264 (706)
Q Consensus 187 ~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~-- 264 (706)
.+....+.+++..+.+.+. .++.+ +.++|+.. +......+++.|. +|+++++.+.+++
T Consensus 124 ----~v~~~~~~~da~~l~~~~~---~~~~v-------vViGgG~i--g~E~A~~l~~~g~----~Vtlv~~~~~~l~~~ 183 (396)
T PRK09754 124 ----RCFTLRHAGDAARLREVLQ---PERSV-------VIVGAGTI--GLELAASATQRRC----KVTVIELAATVMGRN 183 (396)
T ss_pred ----CEEecCCHHHHHHHHHHhh---cCCeE-------EEECCCHH--HHHHHHHHHHcCC----eEEEEecCCcchhhh
Confidence 2222233444444444332 22222 22333322 2233344566654 4999999888764
Q ss_pred -chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhh-hhcCCCCCCCCceeeC
Q psy8791 265 -SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPE-LATSRLVDQSGYVNVD 342 (706)
Q Consensus 265 -~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~-~~~~~l~~~~G~i~vd 342 (706)
++.+.+.+.+.+++.||++++++.+++++.+ +.+.+ .+.+|+++++|++|+++|.+|++. +...++..+ |.|.||
T Consensus 184 ~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~-~~~~v-~l~~g~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~-~gi~vd 260 (396)
T PRK09754 184 APPPVQRYLLQRHQQAGVRILLNNAIEHVVDG-EKVEL-TLQSGETLQADVVIYGIGISANDQLAREANLDTA-NGIVID 260 (396)
T ss_pred cCHHHHHHHHHHHHHCCCEEEeCCeeEEEEcC-CEEEE-EECCCCEEECCEEEECCCCChhhHHHHhcCCCcC-CCEEEC
Confidence 5678888999999999999999999999863 33333 345788999999999999999964 455677443 559999
Q ss_pred ccccccCCCCCEEEccccCCCCCC-------chHHHHHHhHHHHHHHHH
Q psy8791 343 KATLQHVKYSNVFAIGDCSNLPTS-------KTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 343 ~~~l~~~~~~~Ifa~GD~~~~~~~-------~~~~~a~~qg~~~a~ni~ 384 (706)
+ +++ |+.|||||+|||+..+.+ .++..|..||+++|+||.
T Consensus 261 ~-~~~-ts~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~ni~ 307 (396)
T PRK09754 261 E-ACR-TCDPAIFAGGDVAITRLDNGALHRCESWENANNQAQIAAAAML 307 (396)
T ss_pred C-CCc-cCCCCEEEccceEeeeCCCCCEEEECcHHHHHHHHHHHHHHhc
Confidence 9 688 799999999999975432 357889999999999995
No 11
>TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit.
Probab=99.97 E-value=9.5e-30 Score=294.75 Aligned_cols=289 Identities=19% Similarity=0.227 Sum_probs=217.3
Q ss_pred EEEECCCHHHHHHHHHHHhhc-CCCeEEEEcCCCCcccC-cccccccCccccCccccccccccc-CCCcEEEEc-eeEEE
Q psy8791 33 LLVVGGGAAGCSMAAKFTSKL-GKGQVSIVEPTDDHYYQ-PMFTLIGGGMKKLSDSRRPMKSVL-PSGATWVKD-KIVSF 108 (706)
Q Consensus 33 VvIIGgG~aGl~aA~~L~~~~-~~~~Vtlie~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~i~~-~v~~i 108 (706)
|||||||+||++||..|++.. .+++|||||+++++.|. +.++.+..+..+.+++..+..+++ ..+++++.+ +|+.|
T Consensus 1 iVIIG~G~AG~~aa~~l~~~~~~~~~Itvi~~e~~~~y~r~~L~~~l~g~~~~~~l~~~~~~~~~~~gv~~~~g~~V~~I 80 (785)
T TIGR02374 1 LVLVGNGMAGHRCIEEVLKLNRHMFEITIFGEEPHPNYNRILLSSVLQGEADLDDITLNSKDWYEKHGITLYTGETVIQI 80 (785)
T ss_pred CEEECCCHHHHHHHHHHHhcCCCCCeEEEEeCCCCCCcccccccHHHCCCCCHHHccCCCHHHHHHCCCEEEcCCeEEEE
Confidence 699999999999999998874 46899999999998776 446666555556666666555544 479999875 89999
Q ss_pred EcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCC
Q psy8791 109 DPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQP 188 (706)
Q Consensus 109 d~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 188 (706)
|+++++|.+.+|.++.||+||+|||+.+..|++||.+ . +
T Consensus 81 d~~~k~V~~~~g~~~~yD~LVlATGs~p~~p~ipG~~-----------------------------------~------~ 119 (785)
T TIGR02374 81 DTDQKQVITDAGRTLSYDKLILATGSYPFILPIPGAD-----------------------------------K------K 119 (785)
T ss_pred ECCCCEEEECCCcEeeCCEEEECCCCCcCCCCCCCCC-----------------------------------C------C
Confidence 9999999999998999999999999999999999932 0 0
Q ss_pred CCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC---c
Q psy8791 189 DSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP---S 265 (706)
Q Consensus 189 ~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~---~ 265 (706)
.+....+.+.+..+.+.+.. ++. .++++|+.. +..++..+++.|. +|++++..+.+++ +
T Consensus 120 --~v~~~rt~~d~~~i~~~~~~---~k~-------vvVVGgG~~--GlE~A~~L~~~G~----~Vtvv~~~~~ll~~~ld 181 (785)
T TIGR02374 120 --GVYVFRTIEDLDAIMAMAQR---FKK-------AAVIGGGLL--GLEAAVGLQNLGM----DVSVIHHAPGLMAKQLD 181 (785)
T ss_pred --CEEEeCCHHHHHHHHHHhhc---CCe-------EEEECCCHH--HHHHHHHHHhcCC----eEEEEccCCchhhhhcC
Confidence 12222233344444333321 111 233444422 3334456777774 4899999888874 5
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhh-hcCCCCCCCCceeeCcc
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPEL-ATSRLVDQSGYVNVDKA 344 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~-~~~~l~~~~G~i~vd~~ 344 (706)
+...+.+++.|+++||++++++.+.++..++. +..+.+++|+++++|+||+++|++|+..+ ..+++... |.|.||+
T Consensus 182 ~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~-~~~v~~~dG~~i~~D~Vi~a~G~~Pn~~la~~~gl~~~-ggI~Vd~- 258 (785)
T TIGR02374 182 QTAGRLLQRELEQKGLTFLLEKDTVEIVGATK-ADRIRFKDGSSLEADLIVMAAGIRPNDELAVSAGIKVN-RGIIVND- 258 (785)
T ss_pred HHHHHHHHHHHHHcCCEEEeCCceEEEEcCCc-eEEEEECCCCEEEcCEEEECCCCCcCcHHHHhcCCccC-CCEEECC-
Confidence 77888899999999999999999999986543 22233457889999999999999999655 45677333 6699999
Q ss_pred ccccCCCCCEEEccccCCCCCC--chHHHHHHhHHHHHHHHH
Q psy8791 345 TLQHVKYSNVFAIGDCSNLPTS--KTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 345 ~l~~~~~~~Ifa~GD~~~~~~~--~~~~~a~~qg~~~a~ni~ 384 (706)
++| |+.|||||+|||+..+.. ..+..|..||+++|.||.
T Consensus 259 ~~~-Ts~p~IyA~GD~a~~~~~~~gl~~~a~~qa~vaA~ni~ 299 (785)
T TIGR02374 259 SMQ-TSDPDIYAVGECAEHNGRVYGLVAPLYEQAKVLADHIC 299 (785)
T ss_pred Ccc-cCCCCEEEeeecceeCCcccccHHHHHHHHHHHHHHhc
Confidence 788 899999999999987543 356778999999999995
No 12
>PLN02507 glutathione reductase
Probab=99.97 E-value=1.8e-28 Score=270.80 Aligned_cols=295 Identities=16% Similarity=0.200 Sum_probs=204.8
Q ss_pred ccccccCCCCCCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCC---------CCcccCccc----c---cc-c-
Q psy8791 16 SSSFSTSPLSSSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPT---------DDHYYQPMF----T---LI-G- 77 (706)
Q Consensus 16 ~~~~~~~~~~~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~---------~~~~~~p~~----~---~~-~- 77 (706)
.++.++........++||+|||||+||+.||.+++++ |.+|+|||++ +.+...|.. | .+ .
T Consensus 11 ~~~~~~~~~~~~~~~yDvvVIG~GpaG~~aA~~a~~~--G~~V~liE~~~~~~~~~~~~~~GGtc~n~GciPsK~l~~~a 88 (499)
T PLN02507 11 VAKVNADEANATHYDFDLFVIGAGSGGVRAARFSANF--GAKVGICELPFHPISSESIGGVGGTCVIRGCVPKKILVYGA 88 (499)
T ss_pred hhhHhhhhhcccccccCEEEECCCHHHHHHHHHHHHC--CCeEEEEeccCcccccccCCCccceeeccCchhHHHHHHHH
Confidence 3455555433334568999999999999999999999 8999999962 222222211 1 00 0
Q ss_pred -----------CccccCcccccccc------------------ccc-CCCcEEEEceeEEEEcCCCEEEeCCCe--EEEe
Q psy8791 78 -----------GGMKKLSDSRRPMK------------------SVL-PSGATWVKDKIVSFDPENNRVRTQAGS--EISY 125 (706)
Q Consensus 78 -----------~~~~~~~~~~~~~~------------------~~~-~~~v~~i~~~v~~id~~~~~v~~~~g~--~~~y 125 (706)
.+.........++. .++ ..+++++.+++..+|+....|.+.+|+ ++.|
T Consensus 89 ~~~~~~~~~~~~G~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~i~g~a~~vd~~~v~V~~~~g~~~~~~~ 168 (499)
T PLN02507 89 TFGGEFEDAKNYGWEINEKVDFNWKKLLQKKTDEILRLNGIYKRLLANAGVKLYEGEGKIVGPNEVEVTQLDGTKLRYTA 168 (499)
T ss_pred HHHHHHHHHHhcCcccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEecCCEEEEEeCCCcEEEEEc
Confidence 00000000011111 122 268999999999999987788877775 5789
Q ss_pred cEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHH
Q psy8791 126 EYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTL 205 (706)
Q Consensus 126 d~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~ 205 (706)
|+||||||+.+..|.+||.+ .. .+.+.+..
T Consensus 169 d~LIIATGs~p~~p~ipG~~-------------------------------------~~-----------~~~~~~~~-- 198 (499)
T PLN02507 169 KHILIATGSRAQRPNIPGKE-------------------------------------LA-----------ITSDEALS-- 198 (499)
T ss_pred CEEEEecCCCCCCCCCCCcc-------------------------------------ce-----------echHHhhh--
Confidence 99999999999988899821 00 01111111
Q ss_pred HHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceE
Q psy8791 206 RNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDV 283 (706)
Q Consensus 206 ~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v 283 (706)
+..+.+ ++ +.++|+.. ++.....+.+.|. +|+++++.+.+++ ++++.+.+++.|+++||++
T Consensus 199 --l~~~~k-~v--------vVIGgG~i--g~E~A~~l~~~G~----~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~GI~i 261 (499)
T PLN02507 199 --LEELPK-RA--------VVLGGGYI--AVEFASIWRGMGA----TVDLFFRKELPLRGFDDEMRAVVARNLEGRGINL 261 (499)
T ss_pred --hhhcCC-eE--------EEECCcHH--HHHHHHHHHHcCC----eEEEEEecCCcCcccCHHHHHHHHHHHHhCCCEE
Confidence 111211 11 22334422 2222344566664 4999999888765 6888999999999999999
Q ss_pred EcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccc
Q psy8791 284 HKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGD 359 (706)
Q Consensus 284 ~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD 359 (706)
++++.|++++.+++.+.+. +++|+++++|.|++++|++|+.. +.+.++ .+++|+|.||+ ++| |+.|||||+||
T Consensus 262 ~~~~~V~~i~~~~~~~~v~-~~~g~~i~~D~vl~a~G~~pn~~~l~l~~~gl~~~~~G~I~Vd~-~~~-Ts~p~IyAiGD 338 (499)
T PLN02507 262 HPRTNLTQLTKTEGGIKVI-TDHGEEFVADVVLFATGRAPNTKRLNLEAVGVELDKAGAVKVDE-YSR-TNIPSIWAIGD 338 (499)
T ss_pred EeCCEEEEEEEeCCeEEEE-ECCCcEEEcCEEEEeecCCCCCCCCCchhhCcEECCCCcEecCC-CCc-CCCCCEEEeeE
Confidence 9999999998654445443 34678899999999999999954 456677 67889999999 688 89999999999
Q ss_pred cCCCCCCchHHHHHHhHHHHHHHHH
Q psy8791 360 CSNLPTSKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 360 ~~~~~~~~~~~~a~~qg~~~a~ni~ 384 (706)
|+.. +.++..|.+||+++|+||.
T Consensus 339 v~~~--~~l~~~A~~qg~~aa~ni~ 361 (499)
T PLN02507 339 VTNR--INLTPVALMEGTCFAKTVF 361 (499)
T ss_pred cCCC--CccHHHHHHHHHHHHHHHc
Confidence 9975 3478899999999999984
No 13
>TIGR01424 gluta_reduc_2 glutathione-disulfide reductase, plant. The tripeptide glutathione is an important reductant, e.g., for maintaining the cellular thiol/disulfide status and for protecting against reactive oxygen species such as hydrogen peroxide. Glutathione-disulfide reductase regenerates reduced glutathione from oxidized glutathione (glutathione disulfide) + NADPH. This model represents one of two closely related subfamilies of glutathione-disulfide reductase. Both are closely related to trypanothione reductase, and separate models are built so each of the three can describe proteins with conserved function. This model describes glutathione-disulfide reductases of plants and some bacteria, including cyanobacteria.
Probab=99.96 E-value=5.2e-28 Score=265.14 Aligned_cols=279 Identities=14% Similarity=0.172 Sum_probs=193.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccc-c-------------------Ccc-ccC-----
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLI-G-------------------GGM-KKL----- 83 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~-~-------------------~~~-~~~----- 83 (706)
++||+|||||+||++||.+++++ |.+|+|||++. ....+....+ + .+. ...
T Consensus 2 ~yDvvVIG~GpaG~~aA~~aa~~--G~~V~lie~~~-~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 78 (446)
T TIGR01424 2 DYDLFVIGAGSGGVRAARLAANH--GAKVAIAEEPR-VGGTCVIRGCVPKKLMVYGSTFGGEFEDAAGYGWTVGKARFDW 78 (446)
T ss_pred cccEEEECCCHHHHHHHHHHHhC--CCcEEEEecCc-cCceeecCCcCchHHHHHHHHHHHHHhhhHhcCcCCCCCCcCH
Confidence 57999999999999999999999 99999999853 2222111000 0 000 000
Q ss_pred c-----------cccccccc-ccCCCcEEEEceeEEEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCccccccc
Q psy8791 84 S-----------DSRRPMKS-VLPSGATWVKDKIVSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINAL 151 (706)
Q Consensus 84 ~-----------~~~~~~~~-~~~~~v~~i~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~ 151 (706)
. .+...+.. +...+++++.+++..+|++...+. .+|.++.||+||+|||+.+..|++||.+ +.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~g~~~~v~~~~v~v~-~~g~~~~~d~lIiATGs~p~~p~i~G~~---~~- 153 (446)
T TIGR01424 79 KKLLQKKDDEIARLSGLYKRLLANAGVELLEGRARLVGPNTVEVL-QDGTTYTAKKILIAVGGRPQKPNLPGHE---LG- 153 (446)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEecCCEEEEe-cCCeEEEcCEEEEecCCcCCCCCCCCcc---ce-
Confidence 0 01111112 223689999999999987643343 4567899999999999999988899821 00
Q ss_pred ccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChh
Q psy8791 152 GHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAP 231 (706)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~ 231 (706)
.+.+.+.. +... .. ..+.++|+.
T Consensus 154 --------------------------------------------~~~~~~~~----l~~~-~~--------~vvVIGgG~ 176 (446)
T TIGR01424 154 --------------------------------------------ITSNEAFH----LPTL-PK--------SILILGGGY 176 (446)
T ss_pred --------------------------------------------echHHhhc----cccc-CC--------eEEEECCcH
Confidence 00011110 0011 11 112234442
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceE
Q psy8791 232 MKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTER 309 (706)
Q Consensus 232 ~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~ 309 (706)
. +......+.+.|. +|+++++.+.+++ ++++.+.+++.|+++||++++++.+.+++.+++.+.+. ..+|++
T Consensus 177 ~--g~E~A~~l~~~G~----~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~-~~~g~~ 249 (446)
T TIGR01424 177 I--AVEFAGIWRGLGV----QVTLIYRGELILRGFDDDMRALLARNMEGRGIRIHPQTSLTSITKTDDGLKVT-LSHGEE 249 (446)
T ss_pred H--HHHHHHHHHHcCC----eEEEEEeCCCCCcccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCeEEEE-EcCCcE
Confidence 2 2223344566664 4999999888776 67888899999999999999999999997644434333 336788
Q ss_pred EeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHH
Q psy8791 310 LPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 310 i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~ 384 (706)
+++|.+|+|+|.+|+.. +.+.++ .+++|++.||+ ++| |+.|||||+|||+.. +.++..|..||+++|+||.
T Consensus 250 i~~D~viva~G~~pn~~~l~l~~~g~~~~~~G~i~vd~-~~~-Ts~~~IyA~GD~~~~--~~l~~~A~~~g~~~a~~i~ 324 (446)
T TIGR01424 250 IVADVVLFATGRSPNTKGLGLEAAGVELNDAGAIAVDE-YSR-TSIPSIYAVGDVTDR--INLTPVAIMEATCFANTEF 324 (446)
T ss_pred eecCEEEEeeCCCcCCCcCCccccCeEECCCCcEEeCC-CCc-cCCCCEEEeeccCCC--ccchhHHHHHHHHHHHHHh
Confidence 99999999999999954 456677 67889999999 688 899999999999975 4588899999999999995
No 14
>PRK08010 pyridine nucleotide-disulfide oxidoreductase; Provisional
Probab=99.96 E-value=1.9e-27 Score=261.01 Aligned_cols=283 Identities=19% Similarity=0.290 Sum_probs=195.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcc-cCc-------ccccccCcc--ccCc-------cccc----
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHY-YQP-------MFTLIGGGM--KKLS-------DSRR---- 88 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~-~~p-------~~~~~~~~~--~~~~-------~~~~---- 88 (706)
.+||||||||+||++||.+|+++ +.+|+|||+.+.+. ..+ ......... .+.. .+..
T Consensus 3 ~yDvvVIGgGpaGl~aA~~la~~--g~~V~lie~~~~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (441)
T PRK08010 3 KYQAVIIGFGKAGKTLAVTLAKA--GWRVALIEQSNAMYGGTCINIGCIPTKTLVHDAQQHTDFVRAIQRKNEVVNFLRN 80 (441)
T ss_pred cCCEEEECCCHhHHHHHHHHHHC--CCeEEEEcCCCCccceeEeeccccchHHHHHHhccCCCHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999998 89999999986422 111 100000000 0000 0000
Q ss_pred -ccccccC-CCcEEEEceeEEEEcCCCEEEeCCCe-EEEecEEEEccccccccCCCCCCcccccccccccccccccccCc
Q psy8791 89 -PMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGS-EISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPL 165 (706)
Q Consensus 89 -~~~~~~~-~~v~~i~~~v~~id~~~~~v~~~~g~-~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 165 (706)
....+.+ .+++++.+++..++.....|.+.++. ++.||+||+|||+.+..|++||.+
T Consensus 81 ~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~d~lviATGs~p~~p~i~G~~-------------------- 140 (441)
T PRK08010 81 KNFHNLADMPNIDVIDGQAEFINNHSLRVHRPEGNLEIHGEKIFINTGAQTVVPPIPGIT-------------------- 140 (441)
T ss_pred hHHHHHhhcCCcEEEEEEEEEecCCEEEEEeCCCeEEEEeCEEEEcCCCcCCCCCCCCcc--------------------
Confidence 0112233 48999999999998866667666774 699999999999999999999931
Q ss_pred cCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHc
Q psy8791 166 FFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKH 245 (706)
Q Consensus 166 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~ 245 (706)
+. . .+ ++...+.. +.... +++ +.++|+.. +......+.+.
T Consensus 141 -----------------~~---~--~v---~~~~~~~~----~~~~~-~~v--------~ViGgG~~--g~E~A~~l~~~ 180 (441)
T PRK08010 141 -----------------TT---P--GV---YDSTGLLN----LKELP-GHL--------GILGGGYI--GVEFASMFANF 180 (441)
T ss_pred -----------------CC---C--CE---EChhHhhc----ccccC-CeE--------EEECCCHH--HHHHHHHHHHC
Confidence 00 0 01 11111110 11111 111 22334322 22233345556
Q ss_pred CCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCc
Q psy8791 246 KKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGP 323 (706)
Q Consensus 246 g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~ 323 (706)
|. +|+++++.+.+++ ++.+.+.+.+.|+++||++++++.+.+++.+++.+.+. +++ .++++|.+++|+|.+|
T Consensus 181 g~----~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~v~v~-~~~-g~i~~D~vl~a~G~~p 254 (441)
T PRK08010 181 GS----KVTILEAASLFLPREDRDIADNIATILRDQGVDIILNAHVERISHHENQVQVH-SEH-AQLAVDALLIASGRQP 254 (441)
T ss_pred CC----eEEEEecCCCCCCCcCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCEEEEE-EcC-CeEEeCEEEEeecCCc
Confidence 54 5999999988876 67888999999999999999999999998765555443 223 3589999999999999
Q ss_pred hhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHH
Q psy8791 324 VPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 324 ~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~ 384 (706)
|.. +.+.++ .+++|+|.||+ ++| |+.|||||+|||+..+ +.+..|..||+++++||.
T Consensus 255 n~~~l~~~~~gl~~~~~G~i~vd~-~~~-Ts~~~IyA~GD~~~~~--~~~~~a~~~~~~~~~~~~ 315 (441)
T PRK08010 255 ATASLHPENAGIAVNERGAIVVDK-YLH-TTADNIWAMGDVTGGL--QFTYISLDDYRIVRDELL 315 (441)
T ss_pred CCCCcCchhcCcEECCCCcEEECC-Ccc-cCCCCEEEeeecCCCc--cchhHHHHHHHHHHHHHc
Confidence 953 345677 67789999999 687 8999999999999864 578889999999999984
No 15
>PRK06467 dihydrolipoamide dehydrogenase; Reviewed
Probab=99.96 E-value=6.3e-27 Score=257.74 Aligned_cols=283 Identities=15% Similarity=0.159 Sum_probs=190.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCccc----cc---c------------cCccccCcccccc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMF----TL---I------------GGGMKKLSDSRRP 89 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~----~~---~------------~~~~~~~~~~~~~ 89 (706)
.++||+|||||+||++||..|+++ |.+|+|||+++.+..++.. |. + ............+
T Consensus 3 ~~~DvvVIG~GpaG~~aA~~aa~~--G~~V~lie~~~~~GG~c~n~gciP~K~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (471)
T PRK06467 3 IKTQVVVLGAGPAGYSAAFRAADL--GLETVCVERYSTLGGVCLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKID 80 (471)
T ss_pred ccceEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCcccccccCCCcccHHHHHHHHHHHHHHhhhhhcCcccCCCCcC
Confidence 468999999999999999999999 8999999997644332210 00 0 0000000011111
Q ss_pred ccc------------------cc-CCCcEEEEceeEEEEcCCCEEEeCCC--eEEEecEEEEcccccccc-CCCCCCccc
Q psy8791 90 MKS------------------VL-PSGATWVKDKIVSFDPENNRVRTQAG--SEISYEYMIVASGIQMYY-DRVKGPSAL 147 (706)
Q Consensus 90 ~~~------------------~~-~~~v~~i~~~v~~id~~~~~v~~~~g--~~~~yd~lviAtG~~~~~-~~~~g~~~~ 147 (706)
+.. ++ ..+++++++++..+|+..-.|...+| .++.||+||+|||+.+.. |.+++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~a~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~~p~~~~~~-- 158 (471)
T PRK06467 81 IDKMRARKEKVVKQLTGGLAGMAKGRKVTVVNGLGKFTGGNTLEVTGEDGKTTVIEFDNAIIAAGSRPIQLPFIPHDD-- 158 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCEEEEecCCCceEEEEcCEEEEeCCCCCCCCCCCCCCC--
Confidence 111 11 25899999998877654333444455 478999999999999863 3344410
Q ss_pred ccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeee
Q psy8791 148 INALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKC 227 (706)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~ 227 (706)
+ .+ ++...+.. +... +...+.+
T Consensus 159 ~------------------------------------------~v---~~~~~~~~----~~~~---------~~~vvIi 180 (471)
T PRK06467 159 P------------------------------------------RI---WDSTDALE----LKEV---------PKRLLVM 180 (471)
T ss_pred C------------------------------------------cE---EChHHhhc----cccC---------CCeEEEE
Confidence 0 00 11111111 1111 1122334
Q ss_pred CChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCC
Q psy8791 228 GGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSED 305 (706)
Q Consensus 228 ~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~ 305 (706)
+|++. +......+.+.|. +|+++++.+.+++ ++++.+.+++.|++. |++++++.+++++.+++.+.+...+
T Consensus 181 GgG~i--G~E~A~~l~~~G~----~Vtlv~~~~~il~~~d~~~~~~~~~~l~~~-v~i~~~~~v~~i~~~~~~~~v~~~~ 253 (471)
T PRK06467 181 GGGII--GLEMGTVYHRLGS----EVDVVEMFDQVIPAADKDIVKVFTKRIKKQ-FNIMLETKVTAVEAKEDGIYVTMEG 253 (471)
T ss_pred CCCHH--HHHHHHHHHHcCC----CEEEEecCCCCCCcCCHHHHHHHHHHHhhc-eEEEcCCEEEEEEEcCCEEEEEEEe
Confidence 44432 2223345666664 3999999998887 788899999999988 9999999999998654444432211
Q ss_pred -C--ceEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHH
Q psy8791 306 -K--TERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKV 378 (706)
Q Consensus 306 -~--g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~ 378 (706)
+ ++++++|.||+++|.+||.. +...++ .+++|+|.||+ ++| |+.|||||+|||+.. |+++..|..||+.
T Consensus 254 ~~~~~~~i~~D~vi~a~G~~pn~~~l~~~~~gl~~~~~G~I~Vd~-~~~-t~~p~VyAiGDv~~~--~~la~~A~~eG~~ 329 (471)
T PRK06467 254 KKAPAEPQRYDAVLVAVGRVPNGKLLDAEKAGVEVDERGFIRVDK-QCR-TNVPHIFAIGDIVGQ--PMLAHKGVHEGHV 329 (471)
T ss_pred CCCcceEEEeCEEEEeecccccCCccChhhcCceECCCCcEeeCC-Ccc-cCCCCEEEehhhcCC--cccHHHHHHHHHH
Confidence 2 35799999999999999954 345677 77899999999 688 899999999999875 4588999999999
Q ss_pred HHHHHH
Q psy8791 379 VYDNLS 384 (706)
Q Consensus 379 ~a~ni~ 384 (706)
+|.||.
T Consensus 330 aa~~i~ 335 (471)
T PRK06467 330 AAEVIA 335 (471)
T ss_pred HHHHHc
Confidence 999994
No 16
>PRK06116 glutathione reductase; Validated
Probab=99.96 E-value=2.9e-27 Score=260.18 Aligned_cols=278 Identities=14% Similarity=0.199 Sum_probs=193.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCccc----c---------------c-c-cCcc------c
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMF----T---------------L-I-GGGM------K 81 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~----~---------------~-~-~~~~------~ 81 (706)
..+||+|||||+||++||..|+++ |.+|+|||++.. ...+.. | . . ..+. .
T Consensus 3 ~~~DvvVIG~GpaG~~aA~~~a~~--G~~V~liE~~~~-GG~c~n~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 79 (450)
T PRK06116 3 KDYDLIVIGGGSGGIASANRAAMY--GAKVALIEAKRL-GGTCVNVGCVPKKLMWYGAQIAEAFHDYAPGYGFDVTENKF 79 (450)
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeccch-hhhhhccCcchHHHHHHHHHHHHHHHhHHHhcCCCCCCCCc
Confidence 357999999999999999999999 899999998632 111100 0 0 0 0000 0
Q ss_pred cCcc-----------ccccccc-ccCCCcEEEEceeEEEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCccccc
Q psy8791 82 KLSD-----------SRRPMKS-VLPSGATWVKDKIVSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALIN 149 (706)
Q Consensus 82 ~~~~-----------~~~~~~~-~~~~~v~~i~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~ 149 (706)
+... +...+.. +...+++++.++++.+++ ++|.+ +|.++.||+||+|||+.+..|++||.+ +
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~g~~~~v~~--~~v~~-~g~~~~~d~lViATGs~p~~p~i~g~~---~ 153 (450)
T PRK06116 80 DWAKLIANRDAYIDRLHGSYRNGLENNGVDLIEGFARFVDA--HTVEV-NGERYTADHILIATGGRPSIPDIPGAE---Y 153 (450)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccC--CEEEE-CCEEEEeCEEEEecCCCCCCCCCCCcc---e
Confidence 0000 0001111 223689999999988874 56777 677899999999999999988899821 0
Q ss_pred ccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCC
Q psy8791 150 ALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGG 229 (706)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g 229 (706)
. ++.+.+.. +... ..++ +.++|
T Consensus 154 ~---------------------------------------------~~~~~~~~----~~~~-~~~v--------vViGg 175 (450)
T PRK06116 154 G---------------------------------------------ITSDGFFA----LEEL-PKRV--------AVVGA 175 (450)
T ss_pred e---------------------------------------------EchhHhhC----cccc-CCeE--------EEECC
Confidence 0 00000000 0011 1111 22344
Q ss_pred hhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCE-EEEEeCCC
Q psy8791 230 APMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKE-AVFKSEDK 306 (706)
Q Consensus 230 ~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~-v~~~~~~~ 306 (706)
++. +......+.+.|. +|+++++.+.+++ ++++.+.+++.|+++||++++++.|.+++.+++. +.+. +++
T Consensus 176 G~~--g~E~A~~l~~~g~----~Vtlv~~~~~~l~~~~~~~~~~l~~~L~~~GV~i~~~~~V~~i~~~~~g~~~v~-~~~ 248 (450)
T PRK06116 176 GYI--AVEFAGVLNGLGS----ETHLFVRGDAPLRGFDPDIRETLVEEMEKKGIRLHTNAVPKAVEKNADGSLTLT-LED 248 (450)
T ss_pred CHH--HHHHHHHHHHcCC----eEEEEecCCCCccccCHHHHHHHHHHHHHCCcEEECCCEEEEEEEcCCceEEEE-EcC
Confidence 422 2222344566653 4999999887765 6788999999999999999999999999864332 4333 346
Q ss_pred ceEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHH
Q psy8791 307 TERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDN 382 (706)
Q Consensus 307 g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~n 382 (706)
|+++++|.||+|+|.+|+.. +...++ .+++|++.||+ ++| |+.|||||+|||+.. ++++..|..||+.+|+|
T Consensus 249 g~~i~~D~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~-~~~-Ts~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~ 324 (450)
T PRK06116 249 GETLTVDCLIWAIGREPNTDGLGLENAGVKLNEKGYIIVDE-YQN-TNVPGIYAVGDVTGR--VELTPVAIAAGRRLSER 324 (450)
T ss_pred CcEEEeCEEEEeeCCCcCCCCCCchhcCceECCCCcEecCC-CCC-cCCCCEEEEeecCCC--cCcHHHHHHHHHHHHHH
Confidence 78899999999999999954 455677 67889999999 687 899999999999865 35788999999999999
Q ss_pred HH
Q psy8791 383 LS 384 (706)
Q Consensus 383 i~ 384 (706)
|.
T Consensus 325 i~ 326 (450)
T PRK06116 325 LF 326 (450)
T ss_pred Hh
Confidence 95
No 17
>KOG1336|consensus
Probab=99.96 E-value=3.3e-27 Score=242.47 Aligned_cols=293 Identities=16% Similarity=0.206 Sum_probs=216.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcc-cccccCccccCccccccccc-ccCCCcEEEE-cee
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPM-FTLIGGGMKKLSDSRRPMKS-VLPSGATWVK-DKI 105 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~-~~~~~v~~i~-~~v 105 (706)
..+.++|||||++|..|+.+++...+-.+++|+.+..+++|.+. ++.... ...++......+ +...+++++. +.|
T Consensus 73 ~ar~fvivGgG~~g~vaie~~r~~g~~~ri~l~~~~~~~pydr~~Ls~~~~--~~~~~~a~r~~e~Yke~gIe~~~~t~v 150 (478)
T KOG1336|consen 73 AARHFVIVGGGPGGAVAIETLRQVGFTERIALVKREYLLPYDRARLSKFLL--TVGEGLAKRTPEFYKEKGIELILGTSV 150 (478)
T ss_pred ccceEEEEcCCchhhhhHhhHHhhCCCcceEEEeccccCcccchhccccee--eccccccccChhhHhhcCceEEEccee
Confidence 35789999999999999999999866678999999998888752 332211 111222222333 3347899887 799
Q ss_pred EEEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhh
Q psy8791 106 VSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEAL 185 (706)
Q Consensus 106 ~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 185 (706)
+.+|...+++.+.+|+.+.|++|+||||+++.++++||.+ .+
T Consensus 151 ~~~D~~~K~l~~~~Ge~~kys~LilATGs~~~~l~~pG~~-----------------~~--------------------- 192 (478)
T KOG1336|consen 151 VKADLASKTLVLGNGETLKYSKLIIATGSSAKTLDIPGVE-----------------LK--------------------- 192 (478)
T ss_pred EEeeccccEEEeCCCceeecceEEEeecCccccCCCCCcc-----------------cc---------------------
Confidence 9999999999999999999999999999999999999931 01
Q ss_pred cCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC-
Q psy8791 186 DQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP- 264 (706)
Q Consensus 186 ~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~- 264 (706)
+++...+.+.+..+...+.. + ..++|.|+.+..++.+++. +. ....++++++.+.+++
T Consensus 193 -----nv~~ireieda~~l~~~~~~---~--------~~vV~vG~G~ig~Evaa~l-~~----~~~~VT~V~~e~~~~~~ 251 (478)
T KOG1336|consen 193 -----NVFYLREIEDANRLVAAIQL---G--------GKVVCVGGGFIGMEVAAAL-VS----KAKSVTVVFPEPWLLPR 251 (478)
T ss_pred -----ceeeeccHHHHHHHHHHhcc---C--------ceEEEECchHHHHHHHHHH-Hh----cCceEEEEccCccchhh
Confidence 23333333333333333222 2 2244666644444443332 22 2446999999988876
Q ss_pred --chhHHHHHHHHHHhCCceEEcCCceEEEeCCC-CEEEEEeCCCceEEeecEEEECCCCCchhhhhcCCC-CCCCCcee
Q psy8791 265 --SPFYAEKIHDILIGRGVDVHKGKALVEIDLAN-KEAVFKSEDKTERLPYAIMHVTPPMGPVPELATSRL-VDQSGYVN 340 (706)
Q Consensus 265 --~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~-~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~~l-~~~~G~i~ 340 (706)
.+.+.+.+++++++.||++++++.+.+++.+. +++..+.+.+|+++++|+||..+|.+|++.+-..+. ++++|.|.
T Consensus 252 lf~~~i~~~~~~y~e~kgVk~~~~t~~s~l~~~~~Gev~~V~l~dg~~l~adlvv~GiG~~p~t~~~~~g~~~~~~G~i~ 331 (478)
T KOG1336|consen 252 LFGPSIGQFYEDYYENKGVKFYLGTVVSSLEGNSDGEVSEVKLKDGKTLEADLVVVGIGIKPNTSFLEKGILLDSKGGIK 331 (478)
T ss_pred hhhHHHHHHHHHHHHhcCeEEEEecceeecccCCCCcEEEEEeccCCEeccCeEEEeeccccccccccccceecccCCEe
Confidence 58899999999999999999999999998765 567777788999999999999999999954444254 88999999
Q ss_pred eCccccccCCCCCEEEccccCCCCCCc--------hHHHHHHhHHHHHHHHH
Q psy8791 341 VDKATLQHVKYSNVFAIGDCSNLPTSK--------TAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 341 vd~~~l~~~~~~~Ifa~GD~~~~~~~~--------~~~~a~~qg~~~a~ni~ 384 (706)
||+ .|| ++.|||||+||+++.|.+. -++.|..+|+.+...|.
T Consensus 332 V~~-~f~-t~~~~VyAiGDva~fp~~~~~~~~~v~H~~~A~~~g~~av~ai~ 381 (478)
T KOG1336|consen 332 VDE-FFQ-TSVPNVYAIGDVATFPLKGYGEDRRVEHVDHARASGRQAVKAIK 381 (478)
T ss_pred ehh-cee-eccCCcccccceeecccccccccccchHHHHHHHHHHhhhhhhh
Confidence 999 788 8899999999999998652 23455666665555553
No 18
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional
Probab=99.96 E-value=4e-27 Score=260.22 Aligned_cols=284 Identities=15% Similarity=0.193 Sum_probs=196.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCccccc-cc---------------------C-c---ccc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTL-IG---------------------G-G---MKK 82 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~-~~---------------------~-~---~~~ 82 (706)
..+||+|||||+||++||.+|+++ |.+|+|||+++.....+.... ++ . . ..+
T Consensus 4 ~~yDvvVIGaGpaG~~aA~~la~~--G~~v~liE~~~~~GG~~~~~gcipsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (461)
T PRK05249 4 YDYDLVVIGSGPAGEGAAMQAAKL--GKRVAVIERYRNVGGGCTHTGTIPSKALREAVLRLIGFNQNPLYSSYRVKLRIT 81 (461)
T ss_pred ccccEEEECCCHHHHHHHHHHHhC--CCEEEEEeccccccccccccCCCCHHHHHHHHHHHHHHhhhhhhcccCCcCccC
Confidence 358999999999999999999999 899999999754322211000 00 0 0 000
Q ss_pred Cccccc-----------cccc-ccCCCcEEEEceeEEEEcCCCEEEeCCCe--EEEecEEEEccccccccCCCCCCcccc
Q psy8791 83 LSDSRR-----------PMKS-VLPSGATWVKDKIVSFDPENNRVRTQAGS--EISYEYMIVASGIQMYYDRVKGPSALI 148 (706)
Q Consensus 83 ~~~~~~-----------~~~~-~~~~~v~~i~~~v~~id~~~~~v~~~~g~--~~~yd~lviAtG~~~~~~~~~g~~~~~ 148 (706)
...+.. .+.. +...+++++.+++..++.....|...+|. ++.||+||+|||+.+..|++++.+
T Consensus 82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviATGs~p~~p~~~~~~--- 158 (461)
T PRK05249 82 FADLLARADHVINKQVEVRRGQYERNRVDLIQGRARFVDPHTVEVECPDGEVETLTADKIVIATGSRPYRPPDVDFD--- 158 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCEEEEEeCCCceEEEEcCEEEEcCCCCCCCCCCCCCC---
Confidence 000000 0111 22368999999998888765556666664 689999999999998877766621
Q ss_pred cccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeC
Q psy8791 149 NALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCG 228 (706)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~ 228 (706)
.+ .+ ++.+.+.. +.... ...+.++
T Consensus 159 --------------------~~--------------------~v---~~~~~~~~----~~~~~---------~~v~IiG 182 (461)
T PRK05249 159 --------------------HP--------------------RI---YDSDSILS----LDHLP---------RSLIIYG 182 (461)
T ss_pred --------------------CC--------------------eE---EcHHHhhc----hhhcC---------CeEEEEC
Confidence 00 01 11111111 11111 1122334
Q ss_pred ChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCC
Q psy8791 229 GAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDK 306 (706)
Q Consensus 229 g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~ 306 (706)
|+.. +......+.+.|. +|+++++.+.+++ ++++.+.+.+.|+++||++++++.+++++.+++.+.+. .++
T Consensus 183 gG~~--g~E~A~~l~~~g~----~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~gI~v~~~~~v~~i~~~~~~~~v~-~~~ 255 (461)
T PRK05249 183 AGVI--GCEYASIFAALGV----KVTLINTRDRLLSFLDDEISDALSYHLRDSGVTIRHNEEVEKVEGGDDGVIVH-LKS 255 (461)
T ss_pred CCHH--HHHHHHHHHHcCC----eEEEEecCCCcCCcCCHHHHHHHHHHHHHcCCEEEECCEEEEEEEeCCeEEEE-ECC
Confidence 4432 2223345666664 4999999998886 68899999999999999999999999998654445443 346
Q ss_pred ceEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHH
Q psy8791 307 TERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDN 382 (706)
Q Consensus 307 g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~n 382 (706)
|+++++|.+|+|+|.+|+.. +.+.++ .+++|++.||+ ++| |+.|||||+|||+.. ++++..|..||+.+|.|
T Consensus 256 g~~i~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~-~~~-t~~~~IyAiGD~~~~--~~~~~~A~~~g~~aa~~ 331 (461)
T PRK05249 256 GKKIKADCLLYANGRTGNTDGLNLENAGLEADSRGQLKVNE-NYQ-TAVPHIYAVGDVIGF--PSLASASMDQGRIAAQH 331 (461)
T ss_pred CCEEEeCEEEEeecCCccccCCCchhhCcEecCCCcEeeCC-Ccc-cCCCCEEEeeecCCC--cccHhHHHHHHHHHHHH
Confidence 77899999999999999954 455677 67889999999 788 899999999999975 45788999999999999
Q ss_pred HH
Q psy8791 383 LS 384 (706)
Q Consensus 383 i~ 384 (706)
|.
T Consensus 332 i~ 333 (461)
T PRK05249 332 AV 333 (461)
T ss_pred Hc
Confidence 95
No 19
>TIGR01292 TRX_reduct thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (PFAM:PF00070).
Probab=99.96 E-value=5.8e-27 Score=244.58 Aligned_cols=284 Identities=21% Similarity=0.235 Sum_probs=187.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc---ccCcccccccCc--cccCcccccccccc-cCCCcEEEEce
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH---YYQPMFTLIGGG--MKKLSDSRRPMKSV-LPSGATWVKDK 104 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~---~~~p~~~~~~~~--~~~~~~~~~~~~~~-~~~~v~~i~~~ 104 (706)
+||+|||||+|||+||..|++. +++|+|||+++.. .....+...++. ......+...+.+. .+.+++++.++
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~ 78 (300)
T TIGR01292 1 YDVIIIGAGPAGLTAAIYAARA--NLKTLIIEGMEPGGQLTTTTEVENYPGFPEGISGPELMEKMKEQAVKFGAEIIYEE 78 (300)
T ss_pred CcEEEECCCHHHHHHHHHHHHC--CCCEEEEeccCCCcceeecccccccCCCCCCCChHHHHHHHHHHHHHcCCeEEEEE
Confidence 5899999999999999999998 8999999988621 000000001110 01111222333333 34688988899
Q ss_pred eEEEEcCCC--EEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchh
Q psy8791 105 IVSFDPENN--RVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQ 182 (706)
Q Consensus 105 v~~id~~~~--~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 182 (706)
|++++++.+ .+.+.++.++.||+||+|||+.+..+.+||.+
T Consensus 79 v~~v~~~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~i~g~~------------------------------------- 121 (300)
T TIGR01292 79 VIKVDLSDRPFKVKTGDGKEYTAKAVIIATGASARKLGIPGED------------------------------------- 121 (300)
T ss_pred EEEEEecCCeeEEEeCCCCEEEeCEEEECCCCCcccCCCCChh-------------------------------------
Confidence 999998776 56666777899999999999998888888821
Q ss_pred hhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcC
Q psy8791 183 EALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVL 262 (706)
Q Consensus 183 ~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~ 262 (706)
..... .+......+. ....+.+++ .+++++. ...+ ...+.+.+ .+|+++++.+.+
T Consensus 122 ~~~~~---~~~~~~~~~~--------~~~~~~~v~--------ViG~G~~-~~e~-a~~l~~~~----~~V~~v~~~~~~ 176 (300)
T TIGR01292 122 EFLGR---GVSYCATCDG--------PFFKNKEVA--------VVGGGDS-AIEE-ALYLTRIA----KKVTLVHRRDKF 176 (300)
T ss_pred hcCCc---cEEEeeecCh--------hhcCCCEEE--------EECCChH-HHHH-HHHHHhhc----CEEEEEEeCccc
Confidence 10000 0000000000 011222222 2233322 1222 22344444 258999988765
Q ss_pred CCchhHHHHHHHHHHhC-CceEEcCCceEEEeCCCCE--EEEEeC--CCceEEeecEEEECCCCCchh-hhhcCCC-CCC
Q psy8791 263 FPSPFYAEKIHDILIGR-GVDVHKGKALVEIDLANKE--AVFKSE--DKTERLPYAIMHVTPPMGPVP-ELATSRL-VDQ 335 (706)
Q Consensus 263 ~~~~~~~~~~~~~l~~~-gV~v~~~~~v~~i~~~~~~--v~~~~~--~~g~~i~~D~vI~a~G~~~~~-~~~~~~l-~~~ 335 (706)
.. ...+.+.++++ ||++++++.+.+++.+++. +.+... .++.++++|++|||+|++|+. ++..+ + .++
T Consensus 177 ~~----~~~~~~~l~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~~~~~~l~~~-~~~~~ 251 (300)
T TIGR01292 177 RA----EKILLDRLRKNPNIEFLWNSTVKEIVGDNKVEGVKIKNTVTGEEEELKVDGVFIAIGHEPNTELLKGL-LELDE 251 (300)
T ss_pred Cc----CHHHHHHHHhCCCeEEEeccEEEEEEccCcEEEEEEEecCCCceEEEEccEEEEeeCCCCChHHHHHh-heecC
Confidence 43 34456677777 9999999999999876532 333221 234689999999999999995 55555 4 577
Q ss_pred CCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHH
Q psy8791 336 SGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAV 386 (706)
Q Consensus 336 ~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~ 386 (706)
+|++.||+ +++ +++||||++|||+.. .++.+..|..||+.+|.+|.+.
T Consensus 252 ~g~i~v~~-~~~-t~~~~vya~GD~~~~-~~~~~~~A~~~g~~aa~~i~~~ 299 (300)
T TIGR01292 252 GGYIVTDE-GMR-TSVPGVFAAGDVRDK-GYRQAVTAAGDGCIAALSAERY 299 (300)
T ss_pred CCcEEECC-CCc-cCCCCEEEeecccCc-chhhhhhhhhhHHHHHHHHHhh
Confidence 89999999 677 899999999999984 2467889999999999999865
No 20
>TIGR03385 CoA_CoA_reduc CoA-disulfide reductase. Members of this protein family are CoA-disulfide reductase (EC 1.8.1.14), as characterized in Staphylococcus aureus, Pyrococcus horikoshii, and Borrelia burgdorferi, and inferred in several other species on the basis of high levels of CoA and an absence of glutathione as a protective thiol.
Probab=99.95 E-value=1.4e-26 Score=253.32 Aligned_cols=279 Identities=15% Similarity=0.190 Sum_probs=205.5
Q ss_pred HHHHHHHhhcCCCeEEEEcCCCCcccCc-ccccccCccccC-cc-cccccccc-cCCCcEEE-EceeEEEEcCCCEEEeC
Q psy8791 44 SMAAKFTSKLGKGQVSIVEPTDDHYYQP-MFTLIGGGMKKL-SD-SRRPMKSV-LPSGATWV-KDKIVSFDPENNRVRTQ 118 (706)
Q Consensus 44 ~aA~~L~~~~~~~~Vtlie~~~~~~~~p-~~~~~~~~~~~~-~~-~~~~~~~~-~~~~v~~i-~~~v~~id~~~~~v~~~ 118 (706)
+||.+|++..++++|||||+++++.|.| .++.+..+.... +. +..+.+++ ...++++. .++|+.||++++++.+.
T Consensus 1 saA~~l~~~~~~~~Vtlid~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~gv~~~~~~~V~~id~~~~~v~~~ 80 (427)
T TIGR03385 1 SAASRVRRLDKESDIIVFEKTEDVSFANCGLPYVIGGVIDDRNKLLAYTPEVFIKKRGIDVKTNHEVIEVNDERQTVVVR 80 (427)
T ss_pred CHHHHHHhhCCCCcEEEEEcCCceeEEcCCCCeEeccccCCHHHcccCCHHHHHHhcCCeEEecCEEEEEECCCCEEEEE
Confidence 4889999887789999999999999988 477776665543 22 33334455 44789986 57999999999988775
Q ss_pred C---CeEEE--ecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcc
Q psy8791 119 A---GSEIS--YEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVS 193 (706)
Q Consensus 119 ~---g~~~~--yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 193 (706)
+ +.++. ||+||+|||+.+..+.+||.+ . . .+.
T Consensus 81 ~~~~~~~~~~~yd~lIiATG~~p~~~~i~G~~-----------------------------------~------~--~v~ 117 (427)
T TIGR03385 81 NNKTNETYEESYDYLILSPGASPIVPNIEGIN-----------------------------------L------D--IVF 117 (427)
T ss_pred ECCCCCEEecCCCEEEECCCCCCCCCCCCCcC-----------------------------------C------C--CEE
Confidence 3 34677 999999999999988899831 0 0 122
Q ss_pred cCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCC-C--chhHHH
Q psy8791 194 TNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLF-P--SPFYAE 270 (706)
Q Consensus 194 ~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~-~--~~~~~~ 270 (706)
...+...+..+.+.+.....+++++ ++|++. +......+++.|. +|+++++.+.++ + ++.+.+
T Consensus 118 ~~~~~~~~~~~~~~l~~~~~~~vvV--------iGgG~~--g~e~A~~l~~~g~----~Vtli~~~~~~~~~~~~~~~~~ 183 (427)
T TIGR03385 118 TLRNLEDTDAIKQYIDKNKVENVVI--------IGGGYI--GIEMAEALRERGK----NVTLIHRSERILNKLFDEEMNQ 183 (427)
T ss_pred EECCHHHHHHHHHHHhhcCCCeEEE--------ECCCHH--HHHHHHHHHhCCC----cEEEEECCcccCccccCHHHHH
Confidence 2233444455555554443333333 333332 2233345666664 499999888764 2 577888
Q ss_pred HHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch-hhhhcCCC-CCCCCceeeCcccccc
Q psy8791 271 KIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV-PELATSRL-VDQSGYVNVDKATLQH 348 (706)
Q Consensus 271 ~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~-~~~~~~~l-~~~~G~i~vd~~~l~~ 348 (706)
.+++.|+++||++++++.+.+++.++..++ ..+|+++++|.+|+|+|.+|+ +++.++++ .+++|++.||+ +++
T Consensus 184 ~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~---~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~~G~i~vd~-~~~- 258 (427)
T TIGR03385 184 IVEEELKKHEINLRLNEEVDSIEGEERVKV---FTSGGVYQADMVILATGIKPNSELAKDSGLKLGETGAIWVNE-KFQ- 258 (427)
T ss_pred HHHHHHHHcCCEEEeCCEEEEEecCCCEEE---EcCCCEEEeCEEEECCCccCCHHHHHhcCcccCCCCCEEECC-CcE-
Confidence 899999999999999999999987654212 236788999999999999999 56777787 67789999999 687
Q ss_pred CCCCCEEEccccCCCCC--------CchHHHHHHhHHHHHHHHH
Q psy8791 349 VKYSNVFAIGDCSNLPT--------SKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 349 ~~~~~Ifa~GD~~~~~~--------~~~~~~a~~qg~~~a~ni~ 384 (706)
|+.|+|||+|||+..+. ++++..|.+||+++|+||.
T Consensus 259 t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~~a~ni~ 302 (427)
T TIGR03385 259 TSVPNIYAAGDVAESHNIITKKPAWVPLAWGANKMGRIAGENIA 302 (427)
T ss_pred eCCCCEEEeeeeEEeeeccCCCceeeechHHHHHHHHHHHHHhc
Confidence 79999999999997532 3578899999999999994
No 21
>PRK14694 putative mercuric reductase; Provisional
Probab=99.95 E-value=1.6e-26 Score=255.10 Aligned_cols=282 Identities=18% Similarity=0.252 Sum_probs=195.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-------cccc------------ccc--Ccc------
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-------PMFT------------LIG--GGM------ 80 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~~~------------~~~--~~~------ 80 (706)
...+||+|||||+||++||..|++. +.+|+|||++.. ... |.-. ... .+.
T Consensus 4 ~~~~dviVIGaG~aG~~aA~~l~~~--g~~v~lie~~~~-GGtc~n~GciPsk~l~~~a~~~~~~~~~~~~~g~~~~~~~ 80 (468)
T PRK14694 4 DNNLHIAVIGSGGSAMAAALKATER--GARVTLIERGTI-GGTCVNIGCVPSKIMIRAAHIAHLRRESPFDDGLSAQAPV 80 (468)
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC--CCcEEEEEcccc-ccceecCCccccHHHHHHHHHHHHHhhccccCCcccCCCc
Confidence 3568999999999999999999998 899999998752 110 1100 000 000
Q ss_pred ccCcccc-------cc-----ccccc-C-CCcEEEEceeEEEEcCCCEEEeCCC--eEEEecEEEEccccccccCCCCCC
Q psy8791 81 KKLSDSR-------RP-----MKSVL-P-SGATWVKDKIVSFDPENNRVRTQAG--SEISYEYMIVASGIQMYYDRVKGP 144 (706)
Q Consensus 81 ~~~~~~~-------~~-----~~~~~-~-~~v~~i~~~v~~id~~~~~v~~~~g--~~~~yd~lviAtG~~~~~~~~~g~ 144 (706)
.+...+. .. +...+ . .+++++.++++.+|++...|.+.+| .+++||+||+|||+.+..|++||.
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lViATGs~p~~p~i~G~ 160 (468)
T PRK14694 81 VDRSALLAQQQARVEELRESKYQSILRENAAITVLNGEARFVDERTLTVTLNDGGEQTVHFDRAFIGTGARPAEPPVPGL 160 (468)
T ss_pred cCHHHHHHHHHHHHHHHhcccHHHHHhcCCCeEEEEEEEEEecCCEEEEEecCCCeEEEECCEEEEeCCCCCCCCCCCCC
Confidence 0000100 00 11122 2 3799999999999998888888876 379999999999999999999993
Q ss_pred cccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCC
Q psy8791 145 SALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATP 224 (706)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~ 224 (706)
+ +. .++ +...+.. +.... .++
T Consensus 161 ~-------------------------------------~~------~~~---~~~~~~~----l~~~~-~~v-------- 181 (468)
T PRK14694 161 A-------------------------------------ET------PYL---TSTSALE----LDHIP-ERL-------- 181 (468)
T ss_pred C-------------------------------------CC------ceE---cchhhhc----hhcCC-CeE--------
Confidence 2 00 000 0111111 11111 111
Q ss_pred eeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEE
Q psy8791 225 IKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFK 302 (706)
Q Consensus 225 v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~ 302 (706)
+.+++++. +......+++.|. +|+++++. ++++ ++++.+.+++.|+++||++++++.+.+++.+++.+.+.
T Consensus 182 vViG~G~~--G~E~A~~l~~~g~----~Vtlv~~~-~~l~~~~~~~~~~l~~~l~~~GI~v~~~~~v~~i~~~~~~~~v~ 254 (468)
T PRK14694 182 LVIGASVV--ALELAQAFARLGS----RVTVLARS-RVLSQEDPAVGEAIEAAFRREGIEVLKQTQASEVDYNGREFILE 254 (468)
T ss_pred EEECCCHH--HHHHHHHHHHcCC----eEEEEECC-CCCCCCCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCEEEEE
Confidence 22333322 2333455666764 48888864 5554 67889999999999999999999999998766544433
Q ss_pred eCCCceEEeecEEEECCCCCchhhh---hcCCCCCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHH
Q psy8791 303 SEDKTERLPYAIMHVTPPMGPVPEL---ATSRLVDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVV 379 (706)
Q Consensus 303 ~~~~g~~i~~D~vI~a~G~~~~~~~---~~~~l~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~ 379 (706)
+ ++.++++|.+|+|+|.+|+..+ .+.++..++|++.||+ +++ |+.|||||+|||+..+ .....|..||+.+
T Consensus 255 -~-~~~~i~~D~vi~a~G~~pn~~~l~l~~~g~~~~~G~i~vd~-~~~-Ts~~~IyA~GD~~~~~--~~~~~A~~~G~~a 328 (468)
T PRK14694 255 -T-NAGTLRAEQLLVATGRTPNTENLNLESIGVETERGAIRIDE-HLQ-TTVSGIYAAGDCTDQP--QFVYVAAAGGSRA 328 (468)
T ss_pred -E-CCCEEEeCEEEEccCCCCCcCCCCchhcCcccCCCeEeeCC-Ccc-cCCCCEEEEeecCCCc--ccHHHHHHHHHHH
Confidence 2 3347999999999999999653 3456755789999999 688 8999999999999864 4778899999999
Q ss_pred HHHHH
Q psy8791 380 YDNLS 384 (706)
Q Consensus 380 a~ni~ 384 (706)
|.||.
T Consensus 329 a~~i~ 333 (468)
T PRK14694 329 AINMT 333 (468)
T ss_pred HHHhc
Confidence 99994
No 22
>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion]
Probab=99.95 E-value=5.3e-27 Score=250.73 Aligned_cols=283 Identities=16% Similarity=0.245 Sum_probs=200.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-------ccc---c------c---cc--Ccc------c
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-------PMF---T------L---IG--GGM------K 81 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~~---~------~---~~--~~~------~ 81 (706)
..+|+||||||+||..||.++++. |.+|.+||+.+..... |.- . . .. .|. .
T Consensus 3 ~~yDvvVIG~GpaG~~aA~raa~~--G~kvalvE~~~~lGGtCln~GCIPsK~Ll~~a~~~~~~~~~~~~~Gi~~~~~~i 80 (454)
T COG1249 3 KEYDVVVIGAGPAGYVAAIRAAQL--GLKVALVEKGERLGGTCLNVGCIPSKALLHAAEVIEEARHAAKEYGISAEVPKI 80 (454)
T ss_pred ccccEEEECCCHHHHHHHHHHHhC--CCCEEEEeecCCcCceEEeeCccccHHHHHHHHHHHHHhhcccccceecCCCCc
Confidence 468999999999999999999999 7779999999532222 210 0 0 00 000 0
Q ss_pred cCccc-----------ccccccccC-CCcEEEEceeEEEEcCCCEEEeCC--CeEEEecEEEEccccccccCCCCCCccc
Q psy8791 82 KLSDS-----------RRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQA--GSEISYEYMIVASGIQMYYDRVKGPSAL 147 (706)
Q Consensus 82 ~~~~~-----------~~~~~~~~~-~~v~~i~~~v~~id~~~~~v~~~~--g~~~~yd~lviAtG~~~~~~~~~g~~~~ 147 (706)
+..++ ...+..+++ .+++++.++..-+| .++|.+.+ .+++++|++|||||++|..|++|+.+
T Consensus 81 d~~~~~~~k~~v~~~~~~~~~~l~~~~~V~vi~G~a~f~~--~~~v~V~~~~~~~~~a~~iiIATGS~p~~~~~~~~~-- 156 (454)
T COG1249 81 DFEKLLARKDKVVRLLTGGVEGLLKKNGVDVIRGEARFVD--PHTVEVTGEDKETITADNIIIATGSRPRIPPGPGID-- 156 (454)
T ss_pred CHHHHHHHHHHHHHHHhhhHHHHHhhCCCEEEEEEEEECC--CCEEEEcCCCceEEEeCEEEEcCCCCCcCCCCCCCC--
Confidence 11000 011222333 58999999888776 45676665 47899999999999999999888842
Q ss_pred ccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeee
Q psy8791 148 INALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKC 227 (706)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~ 227 (706)
+. .+ ++.+.+.. +..++ .+-+.+
T Consensus 157 -----------------------------------~~------~~---~~s~~~l~----~~~lP---------~~lvIi 179 (454)
T COG1249 157 -----------------------------------GA------RI---LDSSDALF----LLELP---------KSLVIV 179 (454)
T ss_pred -----------------------------------CC------eE---Eechhhcc----cccCC---------CEEEEE
Confidence 10 00 00000000 00222 222334
Q ss_pred CChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCC
Q psy8791 228 GGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSED 305 (706)
Q Consensus 228 ~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~ 305 (706)
+|+.. +......+++.|.. ||++++.+++++ ++++++.+.+.|++.|+++++++++++++.+++.+.+. .+
T Consensus 180 GgG~I--GlE~a~~~~~LG~~----VTiie~~~~iLp~~D~ei~~~~~~~l~~~gv~i~~~~~v~~~~~~~~~v~v~-~~ 252 (454)
T COG1249 180 GGGYI--GLEFASVFAALGSK----VTVVERGDRILPGEDPEISKELTKQLEKGGVKILLNTKVTAVEKKDDGVLVT-LE 252 (454)
T ss_pred CCCHH--HHHHHHHHHHcCCc----EEEEecCCCCCCcCCHHHHHHHHHHHHhCCeEEEccceEEEEEecCCeEEEE-Ee
Confidence 44422 22333457778854 999999999998 89999999999999999999999999998766543332 23
Q ss_pred Cce--EEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHH
Q psy8791 306 KTE--RLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVV 379 (706)
Q Consensus 306 ~g~--~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~ 379 (706)
+|+ ++++|.+++|+|.+||.. +++.|+ .+++|+|.||. .++ |+.|||||+|||+..+. +++.|..||+++
T Consensus 253 ~g~~~~~~ad~vLvAiGR~Pn~~~LgLe~~Gv~~~~rg~I~VD~-~~~-Tnvp~IyA~GDV~~~~~--Lah~A~~eg~ia 328 (454)
T COG1249 253 DGEGGTIEADAVLVAIGRKPNTDGLGLENAGVELDDRGFIKVDD-QMT-TNVPGIYAIGDVIGGPM--LAHVAMAEGRIA 328 (454)
T ss_pred cCCCCEEEeeEEEEccCCccCCCCCChhhcCceECCCCCEEeCC-ccc-cCCCCEEEeeccCCCcc--cHhHHHHHHHHH
Confidence 444 799999999999999943 677898 88889999995 555 88999999999988754 899999999999
Q ss_pred HHHHHH
Q psy8791 380 YDNLSA 385 (706)
Q Consensus 380 a~ni~~ 385 (706)
|+||..
T Consensus 329 a~~i~g 334 (454)
T COG1249 329 AENIAG 334 (454)
T ss_pred HHHHhC
Confidence 999975
No 23
>PRK06370 mercuric reductase; Validated
Probab=99.95 E-value=1.8e-26 Score=254.67 Aligned_cols=281 Identities=19% Similarity=0.258 Sum_probs=192.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCccccc-c-------------------cCcc-------c
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTL-I-------------------GGGM-------K 81 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~-~-------------------~~~~-------~ 81 (706)
..+||||||||+||++||.+|+++ |++|+|||+... ...+.... + ..+. .
T Consensus 4 ~~~DvvVIG~GpaG~~aA~~aa~~--G~~v~lie~~~~-GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (463)
T PRK06370 4 QRYDAIVIGAGQAGPPLAARAAGL--GMKVALIERGLL-GGTCVNTGCVPTKTLIASARAAHLARRAAEYGVSVGGPVSV 80 (463)
T ss_pred ccccEEEECCCHHHHHHHHHHHhC--CCeEEEEecCcc-CCceeccccCcHHHHHHHHHHHHHHHHHHhcCcccCccCcc
Confidence 458999999999999999999999 899999998742 11111000 0 0000 0
Q ss_pred cCcccc-----------cccccccC-C-CcEEEEceeEEEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccc
Q psy8791 82 KLSDSR-----------RPMKSVLP-S-GATWVKDKIVSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALI 148 (706)
Q Consensus 82 ~~~~~~-----------~~~~~~~~-~-~v~~i~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~ 148 (706)
+...+. ..+...+. . +++++.++...+ +.++|.++ +.++.||+||+|||+.+..|++||.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~g~~~~~--~~~~v~v~-~~~~~~d~lViATGs~p~~p~i~G~~--- 154 (463)
T PRK06370 81 DFKAVMARKRRIRARSRHGSEQWLRGLEGVDVFRGHARFE--SPNTVRVG-GETLRAKRIFINTGARAAIPPIPGLD--- 154 (463)
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHhcCCCcEEEEEEEEEc--cCCEEEEC-cEEEEeCEEEEcCCCCCCCCCCCCCC---
Confidence 110000 11122222 3 899988877654 45667764 56799999999999999999999932
Q ss_pred cccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeC
Q psy8791 149 NALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCG 228 (706)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~ 228 (706)
.. .+ ++.+.+.. +... +...+.++
T Consensus 155 ----------------------------------~~------~~---~~~~~~~~----~~~~---------~~~vvVIG 178 (463)
T PRK06370 155 ----------------------------------EV------GY---LTNETIFS----LDEL---------PEHLVIIG 178 (463)
T ss_pred ----------------------------------cC------ce---EcchHhhC----cccc---------CCEEEEEC
Confidence 00 01 11111100 0011 11122334
Q ss_pred ChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEE--EEEeC
Q psy8791 229 GAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEA--VFKSE 304 (706)
Q Consensus 229 g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v--~~~~~ 304 (706)
|+.. +......+.+.|. +|+++++.+.+++ ++++.+.+++.|+++||++++++.|.+++.+++.+ .+...
T Consensus 179 gG~~--g~E~A~~l~~~G~----~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~~v~~~~~ 252 (463)
T PRK06370 179 GGYI--GLEFAQMFRRFGS----EVTVIERGPRLLPREDEDVAAAVREILEREGIDVRLNAECIRVERDGDGIAVGLDCN 252 (463)
T ss_pred CCHH--HHHHHHHHHHcCC----eEEEEEcCCCCCcccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCEEEEEEEeC
Confidence 4422 2333445666664 4999999988876 67788899999999999999999999998754433 23222
Q ss_pred CCceEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHH
Q psy8791 305 DKTERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVY 380 (706)
Q Consensus 305 ~~g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a 380 (706)
+++.++++|.||+|+|.+|+.. +.+.++ .+++|++.||+ ++| |+.|||||+|||+.. ++++..|..||+++|
T Consensus 253 ~~~~~i~~D~Vi~A~G~~pn~~~l~l~~~g~~~~~~G~i~vd~-~l~-t~~~~IyAiGD~~~~--~~~~~~A~~~g~~aa 328 (463)
T PRK06370 253 GGAPEITGSHILVAVGRVPNTDDLGLEAAGVETDARGYIKVDD-QLR-TTNPGIYAAGDCNGR--GAFTHTAYNDARIVA 328 (463)
T ss_pred CCceEEEeCEEEECcCCCcCCCCcCchhhCceECCCCcEeECc-CCc-CCCCCEEEeeecCCC--cccHHHHHHHHHHHH
Confidence 3456899999999999999954 455677 67889999999 688 899999999999876 457889999999999
Q ss_pred HHHH
Q psy8791 381 DNLS 384 (706)
Q Consensus 381 ~ni~ 384 (706)
+||.
T Consensus 329 ~ni~ 332 (463)
T PRK06370 329 ANLL 332 (463)
T ss_pred HHHh
Confidence 9995
No 24
>TIGR01421 gluta_reduc_1 glutathione-disulfide reductase, animal/bacterial. The tripeptide glutathione is an important reductant, e.g., for maintaining the cellular thiol/disulfide status and for protecting against reactive oxygen species such as hydrogen peroxide. Glutathione-disulfide reductase regenerates reduced glutathione from oxidized glutathione (glutathione disulfide) + NADPH. This model represents one of two closely related subfamilies of glutathione-disulfide reductase. Both are closely related to trypanothione reductase, and separate models are built so each of the three can describe proteins with conserved function. This model describes glutathione-disulfide reductases of animals, yeast, and a number of animal-resident bacteria.
Probab=99.95 E-value=9.6e-27 Score=254.79 Aligned_cols=277 Identities=14% Similarity=0.162 Sum_probs=189.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-------cccc---------------cccC--c---ccc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-------PMFT---------------LIGG--G---MKK 82 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~~~---------------~~~~--~---~~~ 82 (706)
.+||+|||||+||++||..|+++ |.+|+|||++.. ... |... .... . ..+
T Consensus 2 ~yDvvVIG~GpaG~~aA~~aa~~--G~~V~liE~~~~-GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 78 (450)
T TIGR01421 2 HYDYLVIGGGSGGIASARRAAEH--GAKALLVEAKKL-GGTCVNVGCVPKKVMWYASDLAERMHDAADYGFYQNLENTFN 78 (450)
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCcEEEeccccc-ccceeccCcCccHHHHHHHHHHHHHhHHhhcCcccCCcCccC
Confidence 47999999999999999999999 899999999642 221 1100 0000 0 000
Q ss_pred Ccccc-----------ccccccc-CCCcEEEEceeEEEEcCCCEEEeCCCeEEEecEEEEccccccccC-CCCCCccccc
Q psy8791 83 LSDSR-----------RPMKSVL-PSGATWVKDKIVSFDPENNRVRTQAGSEISYEYMIVASGIQMYYD-RVKGPSALIN 149 (706)
Q Consensus 83 ~~~~~-----------~~~~~~~-~~~v~~i~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~-~~~g~~~~~~ 149 (706)
...+. ..+...+ ..+++++.++....+ .++|.+ ++..+.||+||+|||+.+..| ++||.+ +
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~g~~~~~~--~~~v~v-~~~~~~~d~vIiAtGs~p~~p~~i~g~~---~ 152 (450)
T TIGR01421 79 WPELKEKRDAYVDRLNGIYQKNLEKNKVDVIFGHARFTK--DGTVEV-NGRDYTAPHILIATGGKPSFPENIPGAE---L 152 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEcc--CCEEEE-CCEEEEeCEEEEecCCCCCCCCCCCCCc---e
Confidence 00000 0111222 358999988776443 456766 456799999999999999888 788821 0
Q ss_pred ccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCC
Q psy8791 150 ALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGG 229 (706)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g 229 (706)
.. +.+.+.. +... +...+.++|
T Consensus 153 ~~---------------------------------------------~~~~~~~----~~~~---------~~~vvIIGg 174 (450)
T TIGR01421 153 GT---------------------------------------------DSDGFFA----LEEL---------PKRVVIVGA 174 (450)
T ss_pred eE---------------------------------------------cHHHhhC----cccc---------CCeEEEECC
Confidence 00 0000000 0011 112223344
Q ss_pred hhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCE-EEEEeCCC
Q psy8791 230 APMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKE-AVFKSEDK 306 (706)
Q Consensus 230 ~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~-v~~~~~~~ 306 (706)
+.. +......+.+.|. +|+++++.+++++ ++.+.+.+++.|+++||++++++.+++++.++.. +... .++
T Consensus 175 G~i--G~E~A~~l~~~g~----~Vtli~~~~~il~~~d~~~~~~~~~~l~~~gI~i~~~~~v~~i~~~~~~~~~v~-~~~ 247 (450)
T TIGR01421 175 GYI--AVELAGVLHGLGS----ETHLVIRHERVLRSFDSMISETITEEYEKEGINVHKLSKPVKVEKTVEGKLVIH-FED 247 (450)
T ss_pred CHH--HHHHHHHHHHcCC----cEEEEecCCCCCcccCHHHHHHHHHHHHHcCCEEEcCCEEEEEEEeCCceEEEE-ECC
Confidence 422 2223345666664 4999999988876 6788999999999999999999999999864322 3332 335
Q ss_pred c-eEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHH
Q psy8791 307 T-ERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYD 381 (706)
Q Consensus 307 g-~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ 381 (706)
| +++++|.||+++|.+||.. ++..++ .+++|++.||+ ++| |+.|||||+|||+..+ ..+..|..||+.+|+
T Consensus 248 g~~~i~~D~vi~a~G~~pn~~~l~l~~~g~~~~~~G~i~vd~-~~~-T~~p~IyAiGD~~~~~--~~~~~A~~~g~~aa~ 323 (450)
T TIGR01421 248 GKSIDDVDELIWAIGRKPNTKGLGLENVGIKLNEKGQIIVDE-YQN-TNVPGIYALGDVVGKV--ELTPVAIAAGRKLSE 323 (450)
T ss_pred CcEEEEcCEEEEeeCCCcCcccCCccccCcEECCCCcEEeCC-CCc-CCCCCEEEEEecCCCc--ccHHHHHHHHHHHHH
Confidence 6 6799999999999999954 456677 77889999999 677 8999999999999753 477899999999999
Q ss_pred HHH
Q psy8791 382 NLS 384 (706)
Q Consensus 382 ni~ 384 (706)
||.
T Consensus 324 ~i~ 326 (450)
T TIGR01421 324 RLF 326 (450)
T ss_pred HHh
Confidence 994
No 25
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed
Probab=99.95 E-value=2e-26 Score=254.60 Aligned_cols=282 Identities=16% Similarity=0.224 Sum_probs=191.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccc-c-------------------Ccc------cc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLI-G-------------------GGM------KK 82 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~-~-------------------~~~------~~ 82 (706)
..+||+|||||+||++||..|+++ |.+|+|||+++ ....+....+ + .+. .+
T Consensus 3 ~~yDvvVIGaGpaG~~aA~~aa~~--G~~V~liE~~~-~GG~c~~~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 79 (462)
T PRK06416 3 FEYDVIVIGAGPGGYVAAIRAAQL--GLKVAIVEKEK-LGGTCLNRGCIPSKALLHAAERADEARHSEDFGIKAENVGID 79 (462)
T ss_pred ccccEEEECCCHHHHHHHHHHHHC--CCcEEEEeccc-cccceeecccCCcHHHHHhhhHHHHHHHHHhcCcccCCCccC
Confidence 358999999999999999999999 89999999976 2221110000 0 000 00
Q ss_pred Ccccc-----------ccccccc-CCCcEEEEceeEEEEcCCCEEEeCC-CeEEEecEEEEccccccccCCCCCCccccc
Q psy8791 83 LSDSR-----------RPMKSVL-PSGATWVKDKIVSFDPENNRVRTQA-GSEISYEYMIVASGIQMYYDRVKGPSALIN 149 (706)
Q Consensus 83 ~~~~~-----------~~~~~~~-~~~v~~i~~~v~~id~~~~~v~~~~-g~~~~yd~lviAtG~~~~~~~~~g~~~~~~ 149 (706)
...+. .++...+ ..+++++.++++.+|+....|...+ +.++.||+||+|||+.+.. +||.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~~~~~~~~d~lViAtGs~p~~--~pg~~---- 153 (462)
T PRK06416 80 FKKVQEWKNGVVNRLTGGVEGLLKKNKVDIIRGEAKLVDPNTVRVMTEDGEQTYTAKNIILATGSRPRE--LPGIE---- 153 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCEEEEecCCCcEEEEeCEEEEeCCCCCCC--CCCCC----
Confidence 00011 0122222 3689999999998887655555333 4679999999999998854 35621
Q ss_pred ccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCC
Q psy8791 150 ALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGG 229 (706)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g 229 (706)
. ... .+ ++.+.+.. +.... ...+.++|
T Consensus 154 ~-----------------~~~--------------------~v---~~~~~~~~----~~~~~---------~~vvVvGg 180 (462)
T PRK06416 154 I-----------------DGR--------------------VI---WTSDEALN----LDEVP---------KSLVVIGG 180 (462)
T ss_pred C-----------------CCC--------------------eE---EcchHhhC----ccccC---------CeEEEECC
Confidence 0 000 01 11111111 01111 11123344
Q ss_pred hhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCc
Q psy8791 230 APMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKT 307 (706)
Q Consensus 230 ~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g 307 (706)
++. +......+++.|. +|+++++.+.+++ ++.+.+.+++.|+++||+++++++|.+++.+++.+.+.. .++
T Consensus 181 G~~--g~E~A~~l~~~g~----~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~V~~i~~~~~~v~v~~-~~g 253 (462)
T PRK06416 181 GYI--GVEFASAYASLGA----EVTIVEALPRILPGEDKEISKLAERALKKRGIKIKTGAKAKKVEQTDDGVTVTL-EDG 253 (462)
T ss_pred CHH--HHHHHHHHHHcCC----eEEEEEcCCCcCCcCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEEeCCEEEEEE-EeC
Confidence 432 2222345666664 4999999988876 678889999999999999999999999987655554432 233
Q ss_pred ---eEEeecEEEECCCCCchhhh---hcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHH
Q psy8791 308 ---ERLPYAIMHVTPPMGPVPEL---ATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVY 380 (706)
Q Consensus 308 ---~~i~~D~vI~a~G~~~~~~~---~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a 380 (706)
+++++|.+|+|+|.+|+..+ .+.++ .+ +|++.||+ ++| |+.|+|||+|||+.. ++++..|..||+.+|
T Consensus 254 g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~~~-~g~i~vd~-~~~-t~~~~VyAiGD~~~~--~~~~~~A~~~g~~aa 328 (462)
T PRK06416 254 GKEETLEADYVLVAVGRRPNTENLGLEELGVKTD-RGFIEVDE-QLR-TNVPNIYAIGDIVGG--PMLAHKASAEGIIAA 328 (462)
T ss_pred CeeEEEEeCEEEEeeCCccCCCCCCchhcCCeec-CCEEeECC-CCc-cCCCCEEEeeecCCC--cchHHHHHHHHHHHH
Confidence 67999999999999999553 45677 55 89999999 688 899999999999975 458889999999999
Q ss_pred HHHH
Q psy8791 381 DNLS 384 (706)
Q Consensus 381 ~ni~ 384 (706)
.||.
T Consensus 329 ~ni~ 332 (462)
T PRK06416 329 EAIA 332 (462)
T ss_pred HHHc
Confidence 9995
No 26
>TIGR02053 MerA mercuric reductase. This model represents the mercuric reductase found in the mer operon for the detoxification of mercury compounds. MerA is a FAD-containing flavoprotein which reduces Hg(II) to Hg(0) utilizing NADPH.
Probab=99.95 E-value=1.2e-26 Score=256.13 Aligned_cols=280 Identities=17% Similarity=0.228 Sum_probs=193.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCccc----c------------ccc---Ccc------ccC--
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMF----T------------LIG---GGM------KKL-- 83 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~----~------------~~~---~~~------~~~-- 83 (706)
+||||||||+||++||..|+++ |.+|+|||+++. ...+.. | ... .+. .+.
T Consensus 1 yDvvVIGaGpaG~~aA~~aa~~--g~~v~lie~~~~-GG~c~n~gciPsk~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 77 (463)
T TIGR02053 1 YDLVIIGSGAAAFAAAIKAAEL--GASVAMVERGPL-GGTCVNVGCVPSKMLLRAAEVAHYARKPPFGGLAATVAVDFGE 77 (463)
T ss_pred CCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCcc-cCCeeeecEEccHHHHHHHHHHHHhhccCcccccCCCccCHHH
Confidence 5899999999999999999998 899999999752 222110 0 000 000 000
Q ss_pred -----ccccc-----cccccc-CCCcEEEEceeEEEEcCCCEEEeCCCe-EEEecEEEEccccccccCCCCCCccccccc
Q psy8791 84 -----SDSRR-----PMKSVL-PSGATWVKDKIVSFDPENNRVRTQAGS-EISYEYMIVASGIQMYYDRVKGPSALINAL 151 (706)
Q Consensus 84 -----~~~~~-----~~~~~~-~~~v~~i~~~v~~id~~~~~v~~~~g~-~~~yd~lviAtG~~~~~~~~~g~~~~~~~~ 151 (706)
+.+.. .+..++ ..+++++.+++..+| .++|.+.++. .+.||+||+|||+.+..|++||.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~g~~~~~~--~~~v~v~~g~~~~~~~~lIiATGs~p~~p~i~G~~------ 149 (463)
T TIGR02053 78 LLEGKREVVEELRHEKYEDVLSSYGVDYLRGRARFKD--PKTVKVDLGREVRGAKRFLIATGARPAIPPIPGLK------ 149 (463)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHhCCcEEEEEEEEEcc--CCEEEEcCCeEEEEeCEEEEcCCCCCCCCCCCCcc------
Confidence 00100 012222 368999999887665 5678887753 578999999999999999999932
Q ss_pred ccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChh
Q psy8791 152 GHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAP 231 (706)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~ 231 (706)
.. .+ ++.+.+.. +.... .++ +.++|+.
T Consensus 150 -------------------------------~~------~~---~~~~~~~~----~~~~~-~~v--------vIIGgG~ 176 (463)
T TIGR02053 150 -------------------------------EA------GY---LTSEEALA----LDRIP-ESL--------AVIGGGA 176 (463)
T ss_pred -------------------------------cC------ce---ECchhhhC----cccCC-CeE--------EEECCCH
Confidence 00 00 11111100 00011 111 2233432
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEE--EEeCCCc
Q psy8791 232 MKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAV--FKSEDKT 307 (706)
Q Consensus 232 ~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~--~~~~~~g 307 (706)
. +......+.+.|. +|+++++.+++++ ++++...+++.|++.||+++++++|.+++.+++.+. +...+++
T Consensus 177 ~--g~E~A~~l~~~g~----~Vtli~~~~~~l~~~d~~~~~~l~~~l~~~gV~i~~~~~V~~i~~~~~~~~v~~~~~~~~ 250 (463)
T TIGR02053 177 I--GVELAQAFARLGS----EVTILQRSDRLLPREEPEISAAVEEALAEEGIEVVTSAQVKAVSVRGGGKIITVEKPGGQ 250 (463)
T ss_pred H--HHHHHHHHHHcCC----cEEEEEcCCcCCCccCHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCEEEEEEEeCCCc
Confidence 2 2233345666664 4999999988876 678889999999999999999999999986544332 2222234
Q ss_pred eEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHH
Q psy8791 308 ERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNL 383 (706)
Q Consensus 308 ~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni 383 (706)
+++++|.||+|+|.+|+.. +...++ .+++|++.||+ ++| |+.|||||+|||+.. ++++..|..||+++|.||
T Consensus 251 ~~i~~D~ViiA~G~~p~~~~l~l~~~g~~~~~~G~i~vd~-~~~-Ts~~~VyAiGD~~~~--~~~~~~A~~~g~~aa~ni 326 (463)
T TIGR02053 251 GEVEADELLVATGRRPNTDGLGLEKAGVKLDERGGILVDE-TLR-TSNPGIYAAGDVTGG--LQLEYVAAKEGVVAAENA 326 (463)
T ss_pred eEEEeCEEEEeECCCcCCCCCCccccCCEECCCCcEeECC-Ccc-CCCCCEEEeeecCCC--cccHhHHHHHHHHHHHHh
Confidence 6899999999999999954 455677 67889999998 788 899999999999986 458889999999999999
Q ss_pred H
Q psy8791 384 S 384 (706)
Q Consensus 384 ~ 384 (706)
.
T Consensus 327 ~ 327 (463)
T TIGR02053 327 L 327 (463)
T ss_pred c
Confidence 5
No 27
>PLN02546 glutathione reductase
Probab=99.95 E-value=2.3e-26 Score=254.85 Aligned_cols=279 Identities=14% Similarity=0.184 Sum_probs=191.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCC---------CCcccC-------cc--cc------c-c----cCc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPT---------DDHYYQ-------PM--FT------L-I----GGG 79 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~---------~~~~~~-------p~--~~------~-~----~~~ 79 (706)
.++||+|||||+||+.||..++++ |.+|+|||+. ..+... |. +. . . ..+
T Consensus 78 ~~yDvvVIG~GpaG~~aA~~aa~~--G~~V~liE~~~~~~~~~~~~~~GGtC~n~GCiPsK~l~~aa~~~~~~~~~~~~g 155 (558)
T PLN02546 78 YDFDLFTIGAGSGGVRASRFASNF--GASAAVCELPFATISSDTLGGVGGTCVLRGCVPKKLLVYASKYSHEFEESRGFG 155 (558)
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeccccccccccCCCccCcccCcchHHHHHHHHHHHHHHHHHhhhhcC
Confidence 357999999999999999999999 9999999962 111111 11 00 0 0 000
Q ss_pred c-------ccCc-----------cccccccccc-CCCcEEEEceeEEEEcCCCEEEeCCCeEEEecEEEEccccccccCC
Q psy8791 80 M-------KKLS-----------DSRRPMKSVL-PSGATWVKDKIVSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDR 140 (706)
Q Consensus 80 ~-------~~~~-----------~~~~~~~~~~-~~~v~~i~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~ 140 (706)
. .+.. .+...+.+.+ ..+++++.++++.+|+. +|.+ +|+++.||+||||||+++..|+
T Consensus 156 ~~~~~~~~~d~~~~~~~k~~~~~~l~~~~~~~l~~~gV~~i~G~a~~vd~~--~V~v-~G~~~~~D~LVIATGs~p~~P~ 232 (558)
T PLN02546 156 WKYETEPKHDWNTLIANKNAELQRLTGIYKNILKNAGVTLIEGRGKIVDPH--TVDV-DGKLYTARNILIAVGGRPFIPD 232 (558)
T ss_pred cccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEccCC--EEEE-CCEEEECCEEEEeCCCCCCCCC
Confidence 0 0000 0111222323 36899999999999874 5655 5678999999999999999999
Q ss_pred CCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEec
Q psy8791 141 VKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTF 220 (706)
Q Consensus 141 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~ 220 (706)
+||.+ .. ++.+.+... .. ...
T Consensus 233 IpG~~-------------------------------------~v-----------~~~~~~l~~----~~-~~k------ 253 (558)
T PLN02546 233 IPGIE-------------------------------------HA-----------IDSDAALDL----PS-KPE------ 253 (558)
T ss_pred CCChh-------------------------------------hc-----------cCHHHHHhc----cc-cCC------
Confidence 99921 10 111111100 00 111
Q ss_pred CCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCC-CC
Q psy8791 221 PATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLA-NK 297 (706)
Q Consensus 221 ~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~-~~ 297 (706)
..+.++|+.. +......+...+. +|+++++.+.+++ ++.+.+.+++.|+++||++++++.+.++..+ ++
T Consensus 254 --~V~VIGgG~i--GvE~A~~L~~~g~----~Vtlv~~~~~il~~~d~~~~~~l~~~L~~~GV~i~~~~~v~~i~~~~~g 325 (558)
T PLN02546 254 --KIAIVGGGYI--ALEFAGIFNGLKS----DVHVFIRQKKVLRGFDEEVRDFVAEQMSLRGIEFHTEESPQAIIKSADG 325 (558)
T ss_pred --eEEEECCCHH--HHHHHHHHHhcCC----eEEEEEeccccccccCHHHHHHHHHHHHHCCcEEEeCCEEEEEEEcCCC
Confidence 1122344422 2222334555553 5999999888776 6888899999999999999999999999753 33
Q ss_pred EEEEEeCCCceEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHH
Q psy8791 298 EAVFKSEDKTERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVA 373 (706)
Q Consensus 298 ~v~~~~~~~g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~ 373 (706)
.+.+ .+++++...+|.|||++|.+||.. +++.++ .+++|+|.||+ ++| |+.|||||+|||+.. +.++..|.
T Consensus 326 ~v~v-~~~~g~~~~~D~Viva~G~~Pnt~~L~le~~gl~~d~~G~I~VD~-~l~-Ts~p~IYAaGDv~~~--~~l~~~A~ 400 (558)
T PLN02546 326 SLSL-KTNKGTVEGFSHVMFATGRKPNTKNLGLEEVGVKMDKNGAIEVDE-YSR-TSVPSIWAVGDVTDR--INLTPVAL 400 (558)
T ss_pred EEEE-EECCeEEEecCEEEEeeccccCCCcCChhhcCCcCCCCCcEeECC-Cce-eCCCCEEEeeccCCC--cccHHHHH
Confidence 3433 233555556999999999999964 456787 67789999999 688 899999999999986 45788999
Q ss_pred HhHHHHHHHHH
Q psy8791 374 GQCKVVYDNLS 384 (706)
Q Consensus 374 ~qg~~~a~ni~ 384 (706)
.||+.+|+||.
T Consensus 401 ~~g~~~a~~i~ 411 (558)
T PLN02546 401 MEGGALAKTLF 411 (558)
T ss_pred HHHHHHHHHHc
Confidence 99999999994
No 28
>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional
Probab=99.95 E-value=4.5e-26 Score=249.85 Aligned_cols=281 Identities=19% Similarity=0.252 Sum_probs=191.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc-ccC-------cccccccCc--cccCccccc-----------
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH-YYQ-------PMFTLIGGG--MKKLSDSRR----------- 88 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~-~~~-------p~~~~~~~~--~~~~~~~~~----------- 88 (706)
.+||||||||+||++||..|+++ |.+|+|||+++.. ..+ |....+... ..+...+..
T Consensus 3 ~~dvvVIG~GpaG~~aA~~l~~~--g~~V~liE~~~~~~GG~c~~~gciP~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (438)
T PRK07251 3 TYDLIVIGFGKAGKTLAAKLASA--GKKVALVEESKAMYGGTCINIGCIPTKTLLVAAEKNLSFEQVMATKNTVTSRLRG 80 (438)
T ss_pred ccCEEEECCCHHHHHHHHHHHhC--CCEEEEEecCCcccceeeecCccccchHhhhhhhcCCCHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999998 8999999998742 211 111100000 001111110
Q ss_pred -ccccccCCCcEEEEceeEEEEcCCCEEEeCC---CeEEEecEEEEccccccccCCCCCCcccccccccccccccccccC
Q psy8791 89 -PMKSVLPSGATWVKDKIVSFDPENNRVRTQA---GSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFP 164 (706)
Q Consensus 89 -~~~~~~~~~v~~i~~~v~~id~~~~~v~~~~---g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 164 (706)
....+...+++++.+++..+ ++++|.+.+ ..++.||+||+|||+.+..|++||.+ ++.
T Consensus 81 ~~~~~~~~~gV~~~~g~~~~~--~~~~v~v~~~~~~~~~~~d~vViATGs~~~~p~i~G~~--~~~-------------- 142 (438)
T PRK07251 81 KNYAMLAGSGVDLYDAEAHFV--SNKVIEVQAGDEKIELTAETIVINTGAVSNVLPIPGLA--DSK-------------- 142 (438)
T ss_pred HHHHHHHhCCCEEEEEEEEEc--cCCEEEEeeCCCcEEEEcCEEEEeCCCCCCCCCCCCcC--CCC--------------
Confidence 11223347899999887665 356666643 24789999999999999989999931 000
Q ss_pred ccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHH
Q psy8791 165 LFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRK 244 (706)
Q Consensus 165 ~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~ 244 (706)
.+ ++...+.. +.... .++ +.++|++. +......+++
T Consensus 143 --------------------------~v---~~~~~~~~----~~~~~-~~v--------vIIGgG~~--g~e~A~~l~~ 178 (438)
T PRK07251 143 --------------------------HV---YDSTGIQS----LETLP-ERL--------GIIGGGNI--GLEFAGLYNK 178 (438)
T ss_pred --------------------------cE---EchHHHhc----chhcC-CeE--------EEECCCHH--HHHHHHHHHH
Confidence 01 11111111 11111 111 22344422 2223334566
Q ss_pred cCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCC
Q psy8791 245 HKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMG 322 (706)
Q Consensus 245 ~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~ 322 (706)
.|. +|+++++.+.+++ ++.+.+.+++.|+++||++++++++.+++.+++.+... .+++++++|.+|+|+|.+
T Consensus 179 ~g~----~Vtli~~~~~~l~~~~~~~~~~~~~~l~~~GI~i~~~~~V~~i~~~~~~v~v~--~~g~~i~~D~viva~G~~ 252 (438)
T PRK07251 179 LGS----KVTVLDAASTILPREEPSVAALAKQYMEEDGITFLLNAHTTEVKNDGDQVLVV--TEDETYRFDALLYATGRK 252 (438)
T ss_pred cCC----eEEEEecCCccCCCCCHHHHHHHHHHHHHcCCEEEcCCEEEEEEecCCEEEEE--ECCeEEEcCEEEEeeCCC
Confidence 664 4999999988876 57888889999999999999999999998765555443 256789999999999999
Q ss_pred chhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHH
Q psy8791 323 PVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 323 ~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~ 384 (706)
|+.. +.+.++ .+++|++.||+ ++| |+.|||||+|||+.. +.....|..|++.++.++.
T Consensus 253 p~~~~l~l~~~~~~~~~~g~i~vd~-~~~-t~~~~IyaiGD~~~~--~~~~~~a~~~~~~~~~~~~ 314 (438)
T PRK07251 253 PNTEPLGLENTDIELTERGAIKVDD-YCQ-TSVPGVFAVGDVNGG--PQFTYISLDDFRIVFGYLT 314 (438)
T ss_pred CCcccCCchhcCcEECCCCcEEECC-Ccc-cCCCCEEEeeecCCC--cccHhHHHHHHHHHHHHHc
Confidence 9943 333566 57789999999 687 899999999999975 4577888999999988874
No 29
>PRK07845 flavoprotein disulfide reductase; Reviewed
Probab=99.95 E-value=5.4e-26 Score=250.22 Aligned_cols=282 Identities=17% Similarity=0.208 Sum_probs=191.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-------cccccc-------------cCcccc--Ccccc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-------PMFTLI-------------GGGMKK--LSDSR 87 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~~~~~-------------~~~~~~--~~~~~ 87 (706)
+++|+|||||+||+.||..++++ +.+|+|||+++. ... |.-..+ ..+... .+...
T Consensus 1 ~~~vvviG~G~~G~~~a~~~~~~--g~~v~~~e~~~~-gG~c~~~gciPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 77 (466)
T PRK07845 1 MTRIVIIGGGPGGYEAALVAAQL--GADVTVIERDGL-GGAAVLTDCVPSKTLIATAEVRTELRRAAELGIRFIDDGEAR 77 (466)
T ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCeEEEEEccCC-CCcccccCCcchHHHHHHHHHHHHHHHHHhCCcccccCcccc
Confidence 36899999999999999999998 899999998762 222 110000 000000 00000
Q ss_pred c------------------cc-ccccCCCcEEEEceeEEEE--cCCCE--EEeCCCe--EEEecEEEEccccccccCCCC
Q psy8791 88 R------------------PM-KSVLPSGATWVKDKIVSFD--PENNR--VRTQAGS--EISYEYMIVASGIQMYYDRVK 142 (706)
Q Consensus 88 ~------------------~~-~~~~~~~v~~i~~~v~~id--~~~~~--v~~~~g~--~~~yd~lviAtG~~~~~~~~~ 142 (706)
. .+ ..+...+++++.++++.++ .+.++ |.+.+|. ++.||+||+|||+.+..++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~g~~~~~~~~~~~~~v~V~~~~g~~~~~~~d~lViATGs~p~~~p~~ 157 (466)
T PRK07845 78 VDLPAVNARVKALAAAQSADIRARLEREGVRVIAGRGRLIDPGLGPHRVKVTTADGGEETLDADVVLIATGASPRILPTA 157 (466)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEeecccCCCEEEEEeCCCceEEEecCEEEEcCCCCCCCCCCC
Confidence 0 11 1122368999999998854 33444 4445664 799999999999998765544
Q ss_pred CCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCC
Q psy8791 143 GPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPA 222 (706)
Q Consensus 143 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~ 222 (706)
+.+ .+ .+. +...... +.... .
T Consensus 158 ~~~-~~------------------------------------------~v~---~~~~~~~----~~~~~---------~ 178 (466)
T PRK07845 158 EPD-GE------------------------------------------RIL---TWRQLYD----LDELP---------E 178 (466)
T ss_pred CCC-Cc------------------------------------------eEE---eehhhhc----ccccC---------C
Confidence 310 00 000 0000000 01111 1
Q ss_pred CCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEE
Q psy8791 223 TPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAV 300 (706)
Q Consensus 223 ~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~ 300 (706)
..+.++|+.. +......+.+.|. +|+++++.+.+++ ++.+.+.+++.|+++||++++++.+.+++.+++.+.
T Consensus 179 ~vvVIGgG~i--g~E~A~~l~~~g~----~Vtli~~~~~~l~~~d~~~~~~l~~~L~~~gV~i~~~~~v~~v~~~~~~~~ 252 (466)
T PRK07845 179 HLIVVGSGVT--GAEFASAYTELGV----KVTLVSSRDRVLPGEDADAAEVLEEVFARRGMTVLKRSRAESVERTGDGVV 252 (466)
T ss_pred eEEEECCCHH--HHHHHHHHHHcCC----eEEEEEcCCcCCCCCCHHHHHHHHHHHHHCCcEEEcCCEEEEEEEeCCEEE
Confidence 1122344422 2223345666664 5999999988886 678889999999999999999999999975544454
Q ss_pred EEeCCCceEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhH
Q psy8791 301 FKSEDKTERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQC 376 (706)
Q Consensus 301 ~~~~~~g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg 376 (706)
+. ..+|+++++|.|++++|.+||.. +.++++ .+++|+|.||+ ++| |+.|||||+|||+.. ++++..|..||
T Consensus 253 v~-~~~g~~l~~D~vl~a~G~~pn~~~l~l~~~gl~~~~~G~i~Vd~-~~~-Ts~~~IyA~GD~~~~--~~l~~~A~~~g 327 (466)
T PRK07845 253 VT-LTDGRTVEGSHALMAVGSVPNTAGLGLEEAGVELTPSGHITVDR-VSR-TSVPGIYAAGDCTGV--LPLASVAAMQG 327 (466)
T ss_pred EE-ECCCcEEEecEEEEeecCCcCCCCCCchhhCceECCCCcEeECC-Ccc-cCCCCEEEEeeccCC--ccchhHHHHHH
Confidence 43 34678999999999999999954 466788 67889999999 687 899999999999976 45889999999
Q ss_pred HHHHHHHH
Q psy8791 377 KVVYDNLS 384 (706)
Q Consensus 377 ~~~a~ni~ 384 (706)
++++.|+.
T Consensus 328 ~~aa~~i~ 335 (466)
T PRK07845 328 RIAMYHAL 335 (466)
T ss_pred HHHHHHHc
Confidence 99999995
No 30
>PTZ00058 glutathione reductase; Provisional
Probab=99.95 E-value=1.7e-25 Score=247.87 Aligned_cols=286 Identities=14% Similarity=0.168 Sum_probs=190.9
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCccc----c---------------c-ccCcc-----
Q psy8791 26 SSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMF----T---------------L-IGGGM----- 80 (706)
Q Consensus 26 ~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~----~---------------~-~~~~~----- 80 (706)
+.+.++||+|||||+||++||..+++. |.+|+|||++.. ...|.. | . ...|.
T Consensus 44 ~~~~~yDvvVIG~G~aG~~aA~~aa~~--G~~ValIEk~~~-GGtCln~GCiPsK~l~~~a~~~~~~~~~~~~Gi~~~~~ 120 (561)
T PTZ00058 44 KPRMVYDLIVIGGGSGGMAAARRAARN--KAKVALVEKDYL-GGTCVNVGCVPKKIMFNAASIHDILENSRHYGFDTQFS 120 (561)
T ss_pred CCCccccEEEECcCHHHHHHHHHHHHc--CCeEEEEecccc-cccccccCCCCCchhhhhcccHHHHHHHHhcCCCccCc
Confidence 334568999999999999999999999 899999998742 211110 0 0 00000
Q ss_pred ccCccc-----------ccccccccC-CCcEEEEceeEEEEcCC--------------------CEE------EeCCCeE
Q psy8791 81 KKLSDS-----------RRPMKSVLP-SGATWVKDKIVSFDPEN--------------------NRV------RTQAGSE 122 (706)
Q Consensus 81 ~~~~~~-----------~~~~~~~~~-~~v~~i~~~v~~id~~~--------------------~~v------~~~~g~~ 122 (706)
.+...+ ...+..+++ .+++++.++..-+++.. -+| ..++|.+
T Consensus 121 ~d~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~G~a~f~~~~~v~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~ 200 (561)
T PTZ00058 121 FNLPLLVERRDKYIRRLNDIYRQNLKKDNVEYFEGKGSLLSENQVLIKKVSQVDGEADESDDDEVTIVSAGVSQLDDGQV 200 (561)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEecCCEEEeeccccccccccccccccceeeeccceecCCCcE
Confidence 000010 011122222 68999988765444221 112 1246678
Q ss_pred EEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHH
Q psy8791 123 ISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVE 202 (706)
Q Consensus 123 ~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~ 202 (706)
+.||+||||||+.+..|++||.+ + + ++.+...
T Consensus 201 i~ad~lVIATGS~P~~P~IpG~~---~------------------------------------------v---~ts~~~~ 232 (561)
T PTZ00058 201 IEGKNILIAVGNKPIFPDVKGKE---F------------------------------------------T---ISSDDFF 232 (561)
T ss_pred EECCEEEEecCCCCCCCCCCCce---e------------------------------------------E---EEHHHHh
Confidence 99999999999999989899821 0 0 0111110
Q ss_pred HHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCC
Q psy8791 203 KTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRG 280 (706)
Q Consensus 203 ~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~g 280 (706)
....++.+ +.++|+. ++......+.+.|. +|+++++.+++++ ++++.+.+++.|+++|
T Consensus 233 -------~l~~pk~V-------vIIGgG~--iGlE~A~~l~~~G~----~Vtli~~~~~il~~~d~~i~~~l~~~L~~~G 292 (561)
T PTZ00058 233 -------KIKEAKRI-------GIAGSGY--IAVELINVVNRLGA----ESYIFARGNRLLRKFDETIINELENDMKKNN 292 (561)
T ss_pred -------hccCCCEE-------EEECCcH--HHHHHHHHHHHcCC----cEEEEEecccccccCCHHHHHHHHHHHHHCC
Confidence 11111111 2233332 12223345666664 4999999888876 6788899999999999
Q ss_pred ceEEcCCceEEEeCCCC-EEEEEeCCCceEEeecEEEECCCCCchhhhh---cCCCCCCCCceeeCccccccCCCCCEEE
Q psy8791 281 VDVHKGKALVEIDLANK-EAVFKSEDKTERLPYAIMHVTPPMGPVPELA---TSRLVDQSGYVNVDKATLQHVKYSNVFA 356 (706)
Q Consensus 281 V~v~~~~~v~~i~~~~~-~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~---~~~l~~~~G~i~vd~~~l~~~~~~~Ifa 356 (706)
|+++++..+.+++.++. .+.....++++++++|.|++++|.+|+.... ..++.+++|+|.||+ ++| |+.|||||
T Consensus 293 V~i~~~~~V~~I~~~~~~~v~v~~~~~~~~i~aD~VlvA~Gr~Pn~~~L~l~~~~~~~~~G~I~VDe-~lq-Ts~p~IYA 370 (561)
T PTZ00058 293 INIITHANVEEIEKVKEKNLTIYLSDGRKYEHFDYVIYCVGRSPNTEDLNLKALNIKTPKGYIKVDD-NQR-TSVKHIYA 370 (561)
T ss_pred CEEEeCCEEEEEEecCCCcEEEEECCCCEEEECCEEEECcCCCCCccccCccccceecCCCeEEECc-CCc-cCCCCEEE
Confidence 99999999999986432 3443333445689999999999999995432 234456789999999 687 89999999
Q ss_pred ccccCCCC--------------------------------CCchHHHHHHhHHHHHHHHH
Q psy8791 357 IGDCSNLP--------------------------------TSKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 357 ~GD~~~~~--------------------------------~~~~~~~a~~qg~~~a~ni~ 384 (706)
+|||+..+ .++++..|..||+++|+||.
T Consensus 371 ~GDv~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~la~~A~~~g~~aa~ni~ 430 (561)
T PTZ00058 371 VGDCCMVKKNQEIEDLNLLKLYNEEPYLKKKENTSGESYYNVQLTPVAINAGRLLADRLF 430 (561)
T ss_pred eEeccCccccccccccccccccccccccccccccccccccCcCchHHHHHHHHHHHHHHh
Confidence 99999832 25678899999999999995
No 31
>PRK10262 thioredoxin reductase; Provisional
Probab=99.95 E-value=3e-26 Score=240.97 Aligned_cols=297 Identities=17% Similarity=0.192 Sum_probs=192.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC---cccCcccccccCcc--ccCccccccccccc-CCCcEEE
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD---HYYQPMFTLIGGGM--KKLSDSRRPMKSVL-PSGATWV 101 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~---~~~~p~~~~~~~~~--~~~~~~~~~~~~~~-~~~v~~i 101 (706)
...++|+|||||+|||+||..|+++ ++++++||..+. +.+.+..+.+++.. .+...+...+.+.. ..+.++.
T Consensus 4 ~~~~~vvIIGgGpaGl~aA~~l~~~--g~~~~~ie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (321)
T PRK10262 4 TKHSKLLILGSGPAGYTAAVYAARA--NLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEII 81 (321)
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC--CCCeEEEEeecCCCceecCceECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEE
Confidence 4568999999999999999999998 889999985432 21212221122110 01111111122222 2456777
Q ss_pred EceeEEEEcCCCEEEeC-CCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccc
Q psy8791 102 KDKIVSFDPENNRVRTQ-AGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSG 180 (706)
Q Consensus 102 ~~~v~~id~~~~~v~~~-~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (706)
.++|+.|+...+.+.+. +...+.||+||+|||+.++.|++||.+ . |..+.++
T Consensus 82 ~~~v~~v~~~~~~~~v~~~~~~~~~d~vilAtG~~~~~~~i~g~~----~----------------~~~~~v~------- 134 (321)
T PRK10262 82 FDHINKVDLQNRPFRLTGDSGEYTCDALIIATGASARYLGLPSEE----A----------------FKGRGVS------- 134 (321)
T ss_pred eeEEEEEEecCCeEEEEecCCEEEECEEEECCCCCCCCCCCCCHH----H----------------cCCCcEE-------
Confidence 78888898877764443 233789999999999999988899821 0 1111111
Q ss_pred hhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCC
Q psy8791 181 LQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMG 260 (706)
Q Consensus 181 l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~ 260 (706)
.....+.. ...+.++ +.++|+. . +......+.+.+. +|+++++.+
T Consensus 135 -------------~~~~~~~~--------~~~g~~v--------vVvGgG~-~-g~e~A~~l~~~~~----~Vtlv~~~~ 179 (321)
T PRK10262 135 -------------ACATCDGF--------FYRNQKV--------AVIGGGN-T-AVEEALYLSNIAS----EVHLIHRRD 179 (321)
T ss_pred -------------EeecCCHH--------HcCCCEE--------EEECCCH-H-HHHHHHHHHhhCC----EEEEEEECC
Confidence 00000100 0112122 2233332 1 2223334555553 599999887
Q ss_pred cCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCC---EEEEEeCC---CceEEeecEEEECCCCCchhhhhcCCCCC
Q psy8791 261 VLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANK---EAVFKSED---KTERLPYAIMHVTPPMGPVPELATSRLVD 334 (706)
Q Consensus 261 ~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~---~v~~~~~~---~g~~i~~D~vI~a~G~~~~~~~~~~~l~~ 334 (706)
.+...+.+.+.+++.|++.||++++++.+.+++.++. .+++...+ +.+++++|.|||++|.+|+..+.+.++..
T Consensus 180 ~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~v~~~~~~~~~v~~~~~~~~~~~~~i~~D~vv~a~G~~p~~~l~~~~l~~ 259 (321)
T PRK10262 180 GFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLEL 259 (321)
T ss_pred ccCCCHHHHHHHHhhccCCCeEEEeCCEEEEEEcCCccEEEEEEEEcCCCCeEEEEECCEEEEEeCCccChhHhhccccc
Confidence 6544566778888999999999999999999987653 23443221 23579999999999999997766656644
Q ss_pred CCCceeeCcccc----ccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCC
Q psy8791 335 QSGYVNVDKATL----QHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNR 390 (706)
Q Consensus 335 ~~G~i~vd~~~l----~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~ 390 (706)
++|+|.||+ ++ +.|+.|+|||+|||+..+. +....|..+|..||..|.+.+.+.
T Consensus 260 ~~g~i~vd~-~~~~~~~~t~~~~VyA~GD~~~~~~-~~~~~A~~~g~~Aa~~~~~~l~~~ 317 (321)
T PRK10262 260 ENGYIKVQS-GIHGNATQTSIPGVFAAGDVMDHIY-RQAITSAGTGCMAALDAERYLDGL 317 (321)
T ss_pred cCCEEEECC-CCcccccccCCCCEEECeeccCCCc-ceEEEEehhHHHHHHHHHHHHHhc
Confidence 679999997 22 3489999999999997542 344458999999999999988654
No 32
>PRK06912 acoL dihydrolipoamide dehydrogenase; Validated
Probab=99.95 E-value=1.6e-25 Score=246.35 Aligned_cols=282 Identities=18% Similarity=0.209 Sum_probs=189.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC------ccccc-------------ccCccc--------cC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ------PMFTL-------------IGGGMK--------KL 83 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~------p~~~~-------------~~~~~~--------~~ 83 (706)
++|+|||||+||++||.+|++. |.+|+|||+++...-+ |.-.. ...|.. +.
T Consensus 1 ~~vvVIG~G~aG~~aA~~~~~~--g~~V~lie~~~~GG~c~n~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 78 (458)
T PRK06912 1 SKLVVIGGGPAGYVAAITAAQN--GKNVTLIDEADLGGTCLNEGCMPTKSLLESAEVHDKVKKANHFGITLPNGSISIDW 78 (458)
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCcEEEEECCcccccCCCCccccchHHHHHHHHHHHHHHHHhcCccccCCCCccCH
Confidence 3899999999999999999998 8999999998642111 21000 000110 10
Q ss_pred cccc-----------ccccccc-CCCcEEEEceeEEEEcCCCEEEeCCC-eEEEecEEEEccccccccCCCCCCcccccc
Q psy8791 84 SDSR-----------RPMKSVL-PSGATWVKDKIVSFDPENNRVRTQAG-SEISYEYMIVASGIQMYYDRVKGPSALINA 150 (706)
Q Consensus 84 ~~~~-----------~~~~~~~-~~~v~~i~~~v~~id~~~~~v~~~~g-~~~~yd~lviAtG~~~~~~~~~g~~~~~~~ 150 (706)
+.+. .....++ ..+++++++++..+|+....|..+++ .+++||+||||||+.+..+++++.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~~~~~~~~d~lviATGs~p~~~p~~~~~----- 153 (458)
T PRK06912 79 KQMQARKSQIVTQLVQGIQYLMKKNKIKVIQGKASFETDHRVRVEYGDKEEVVDAEQFIIAAGSEPTELPFAPFD----- 153 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEccCCEEEEeeCCCcEEEECCEEEEeCCCCCCCCCCCCCC-----
Confidence 1110 0111122 25899999999888765545555455 4699999999999998777666621
Q ss_pred cccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCCh
Q psy8791 151 LGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGA 230 (706)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~ 230 (706)
.. .+ ++...+.. +... +...+.++|+
T Consensus 154 --------------------------------~~------~v---~~~~~~~~----~~~~---------~~~vvIIGgG 179 (458)
T PRK06912 154 --------------------------------GK------WI---INSKHAMS----LPSI---------PSSLLIVGGG 179 (458)
T ss_pred --------------------------------CC------eE---EcchHHhC----cccc---------CCcEEEECCC
Confidence 00 00 01111110 1111 1122334444
Q ss_pred hHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCce
Q psy8791 231 PMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTE 308 (706)
Q Consensus 231 ~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~ 308 (706)
+. +......+.+.|. +|+++++.+.+++ ++++.+.+.+.|+++||+++++++|.+++.++..+.+...++..
T Consensus 180 ~i--G~E~A~~l~~~g~----~Vtli~~~~~ll~~~d~e~~~~l~~~L~~~GI~i~~~~~V~~i~~~~~~v~~~~~g~~~ 253 (458)
T PRK06912 180 VI--GCEFASIYSRLGT----KVTIVEMAPQLLPGEDEDIAHILREKLENDGVKIFTGAALKGLNSYKKQALFEYEGSIQ 253 (458)
T ss_pred HH--HHHHHHHHHHcCC----eEEEEecCCCcCccccHHHHHHHHHHHHHCCCEEEECCEEEEEEEcCCEEEEEECCceE
Confidence 32 2222334565653 4999999988886 67888999999999999999999999998766555554321224
Q ss_pred EEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHH
Q psy8791 309 RLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 309 ~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~ 384 (706)
++++|.+|+|+|.+|+.. +...++ .+++| +.||+ ++| |+.|||||+|||+.. ++++..|..||+++|.|+.
T Consensus 254 ~i~~D~vivA~G~~p~~~~l~l~~~gv~~~~~g-i~Vd~-~~~-ts~~~VyA~GD~~~~--~~la~~A~~~g~~aa~~~~ 328 (458)
T PRK06912 254 EVNAEFVLVSVGRKPRVQQLNLEKAGVQFSNKG-ISVNE-HMQ-TNVPHIYACGDVIGG--IQLAHVAFHEGTTAALHAS 328 (458)
T ss_pred EEEeCEEEEecCCccCCCCCCchhcCceecCCC-EEeCC-Cee-cCCCCEEEEeecCCC--cccHHHHHHHHHHHHHHHc
Confidence 799999999999999953 344566 45556 99999 688 899999999999974 4688899999999999984
No 33
>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulfide.
Probab=99.94 E-value=2.7e-25 Score=245.75 Aligned_cols=281 Identities=17% Similarity=0.206 Sum_probs=190.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-------cccc---------c---ccCccccCcccccccc
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-------PMFT---------L---IGGGMKKLSDSRRPMK 91 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~~~---------~---~~~~~~~~~~~~~~~~ 91 (706)
+||+|||||+||++||.+|+++ |.+|+|||+ +..... |... . .............++.
T Consensus 2 yDvvVIG~G~aGl~aA~~la~~--G~~v~lie~-~~~GG~~~~~gc~Psk~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 78 (461)
T TIGR01350 2 YDVVVIGGGPGGYVAAIRAAQL--GLKVALVEK-EYLGGTCLNVGCIPTKALLHSAEVYDEIKHAKDYGIEVENVSVDWE 78 (461)
T ss_pred ccEEEECCCHHHHHHHHHHHhC--CCeEEEEec-CCCCCceeecCccchHHHHHHhhHHHHHHHHHhcCCCCCCCcCCHH
Confidence 7999999999999999999998 899999999 432221 1100 0 0000000000111111
Q ss_pred ------------------ccc-CCCcEEEEceeEEEEcCCCEEEeCCC-eEEEecEEEEccccccccCCCC-CCcccccc
Q psy8791 92 ------------------SVL-PSGATWVKDKIVSFDPENNRVRTQAG-SEISYEYMIVASGIQMYYDRVK-GPSALINA 150 (706)
Q Consensus 92 ------------------~~~-~~~v~~i~~~v~~id~~~~~v~~~~g-~~~~yd~lviAtG~~~~~~~~~-g~~~~~~~ 150 (706)
.++ ..+++++.+++..+++....+...++ .++.||+||+|||+.+..+++| +.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~d~lVlAtG~~p~~~~~~~~~~----- 153 (461)
T TIGR01350 79 KMQKRKNKVVKKLVGGVKGLLKKNKVTVIKGEAKFLDPGTVLVTGENGEETLTAKNIIIATGSRPRSLPGPFDFD----- 153 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCEEEEecCCCcEEEEeCEEEEcCCCCCCCCCCCCCCC-----
Confidence 111 25789999998888765444554444 4799999999999998776665 310
Q ss_pred cccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCCh
Q psy8791 151 LGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGA 230 (706)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~ 230 (706)
.. .+++.+.+.. +.... . ..+.++|+
T Consensus 154 ------------------~~-----------------------~~~~~~~~~~----~~~~~-~--------~vvViGgG 179 (461)
T TIGR01350 154 ------------------GE-----------------------VVITSTGALN----LKEVP-E--------SLVIIGGG 179 (461)
T ss_pred ------------------Cc-----------------------eEEcchHHhc----cccCC-C--------eEEEECCC
Confidence 00 0011111110 01111 1 11223444
Q ss_pred hHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCc-
Q psy8791 231 PMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKT- 307 (706)
Q Consensus 231 ~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g- 307 (706)
+. +......+++.|. +|+++++.+.+++ ++.+.+.+.+.|++.||++++++.|.+++.+++.+.+.. .+|
T Consensus 180 ~~--g~e~A~~l~~~g~----~Vtli~~~~~~l~~~~~~~~~~~~~~l~~~gi~i~~~~~v~~i~~~~~~v~v~~-~~g~ 252 (461)
T TIGR01350 180 VI--GIEFASIFASLGS----KVTVIEMLDRILPGEDAEVSKVVAKALKKKGVKILTNTKVTAVEKNDDQVVYEN-KGGE 252 (461)
T ss_pred HH--HHHHHHHHHHcCC----cEEEEEcCCCCCCCCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEEeCCEEEEEE-eCCc
Confidence 32 2223344666664 4999999988876 678888999999999999999999999986655555433 245
Q ss_pred -eEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHH
Q psy8791 308 -ERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDN 382 (706)
Q Consensus 308 -~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~n 382 (706)
+++++|.+|+|+|.+|+.. +.+.++ .+++|++.||+ ++| ++.|+|||+|||+.. ++++..|..||+.+|+|
T Consensus 253 ~~~i~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~-~l~-t~~~~IyaiGD~~~~--~~~~~~A~~~g~~aa~~ 328 (461)
T TIGR01350 253 TETLTGEKVLVAVGRKPNTEGLGLENLGVELDERGRIVVDE-YMR-TNVPGIYAIGDVIGG--PMLAHVASHEGIVAAEN 328 (461)
T ss_pred EEEEEeCEEEEecCCcccCCCCCcHhhCceECCCCcEeeCC-Ccc-cCCCCEEEeeecCCC--cccHHHHHHHHHHHHHH
Confidence 5799999999999999954 566677 67889999998 788 789999999999975 45888999999999999
Q ss_pred HH
Q psy8791 383 LS 384 (706)
Q Consensus 383 i~ 384 (706)
|.
T Consensus 329 i~ 330 (461)
T TIGR01350 329 IA 330 (461)
T ss_pred Hc
Confidence 95
No 34
>PRK07818 dihydrolipoamide dehydrogenase; Reviewed
Probab=99.94 E-value=4.3e-25 Score=243.73 Aligned_cols=282 Identities=16% Similarity=0.196 Sum_probs=184.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-------ccccccc-----------CccccC-ccccccc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-------PMFTLIG-----------GGMKKL-SDSRRPM 90 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~~~~~~-----------~~~~~~-~~~~~~~ 90 (706)
.+||+|||||+||++||.+|+++ |.+|+|||++.. ... |.-..+. ...... .....++
T Consensus 4 ~~DvvIIG~GpaG~~AA~~aa~~--G~~V~lie~~~~-GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~ 80 (466)
T PRK07818 4 HYDVVVLGAGPGGYVAAIRAAQL--GLKTAVVEKKYW-GGVCLNVGCIPSKALLRNAELAHIFTKEAKTFGISGEVTFDY 80 (466)
T ss_pred cCCEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCC-CCceecCCccccHHHHhhHHHHHHHHHHHHhcCCCcCcccCH
Confidence 47999999999999999999998 899999998632 111 2100000 000000 0011111
Q ss_pred c------------------ccc-CCCcEEEEceeEEEEcCCCEEEeCCC--eEEEecEEEEccccccccCCCCCCccccc
Q psy8791 91 K------------------SVL-PSGATWVKDKIVSFDPENNRVRTQAG--SEISYEYMIVASGIQMYYDRVKGPSALIN 149 (706)
Q Consensus 91 ~------------------~~~-~~~v~~i~~~v~~id~~~~~v~~~~g--~~~~yd~lviAtG~~~~~~~~~g~~~~~~ 149 (706)
. .++ ..+++.+.++...++...-.|...+| .++.||+||||||+.+.. +||.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~--~pg~~---- 154 (466)
T PRK07818 81 GAAFDRSRKVAEGRVKGVHFLMKKNKITEIHGYGTFTDANTLEVDLNDGGTETVTFDNAIIATGSSTRL--LPGTS---- 154 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEcCCCEEEEEecCCCeeEEEcCEEEEeCCCCCCC--CCCCC----
Confidence 0 111 13667777665555433223333444 368999999999999865 36621
Q ss_pred ccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCC
Q psy8791 150 ALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGG 229 (706)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g 229 (706)
+.. .+ ++.+.. . +.... +...+.++|
T Consensus 155 -------------------------------~~~-------~v---~~~~~~--~---~~~~~--------~~~vvVIGg 180 (466)
T PRK07818 155 -------------------------------LSE-------NV---VTYEEQ--I---LSREL--------PKSIVIAGA 180 (466)
T ss_pred -------------------------------CCC-------cE---EchHHH--h---ccccC--------CCeEEEECC
Confidence 000 00 011100 0 00011 112223344
Q ss_pred hhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeC-CC
Q psy8791 230 APMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSE-DK 306 (706)
Q Consensus 230 ~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~-~~ 306 (706)
+.. +......+++.|. +|+++++.+++++ ++++.+.+++.|+++||+++++++|++++.+++.+..... .+
T Consensus 181 G~i--g~E~A~~l~~~G~----~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~ 254 (466)
T PRK07818 181 GAI--GMEFAYVLKNYGV----DVTIVEFLDRALPNEDAEVSKEIAKQYKKLGVKILTGTKVESIDDNGSKVTVTVSKKD 254 (466)
T ss_pred cHH--HHHHHHHHHHcCC----eEEEEecCCCcCCccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCeEEEEEEecC
Confidence 422 2333445666664 4999999888887 6788899999999999999999999999876544332211 23
Q ss_pred c--eEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHH
Q psy8791 307 T--ERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVY 380 (706)
Q Consensus 307 g--~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a 380 (706)
| +++++|.||+|+|.+|+.. +.+.++ ++++|++.||+ ++| |+.|+|||+|||+.. ++++..|..||+++|
T Consensus 255 g~~~~i~~D~vi~a~G~~pn~~~l~l~~~g~~~~~~g~i~vd~-~~~-Ts~p~IyAiGD~~~~--~~l~~~A~~~g~~aa 330 (466)
T PRK07818 255 GKAQELEADKVLQAIGFAPRVEGYGLEKTGVALTDRGAIAIDD-YMR-TNVPHIYAIGDVTAK--LQLAHVAEAQGVVAA 330 (466)
T ss_pred CCeEEEEeCEEEECcCcccCCCCCCchhcCcEECCCCcEeeCC-Ccc-cCCCCEEEEeecCCC--cccHhHHHHHHHHHH
Confidence 4 5799999999999999954 456777 67789999999 688 899999999999975 458899999999999
Q ss_pred HHHH
Q psy8791 381 DNLS 384 (706)
Q Consensus 381 ~ni~ 384 (706)
+||.
T Consensus 331 ~~i~ 334 (466)
T PRK07818 331 ETIA 334 (466)
T ss_pred HHHc
Confidence 9995
No 35
>PRK13748 putative mercuric reductase; Provisional
Probab=99.94 E-value=3.8e-25 Score=250.48 Aligned_cols=281 Identities=17% Similarity=0.248 Sum_probs=192.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-------cccc------------ccc--Ccc------c
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-------PMFT------------LIG--GGM------K 81 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~~~------------~~~--~~~------~ 81 (706)
.++||+|||||+||++||.+|++. |.+|+|||++. .... |... ... .+. .
T Consensus 97 ~~~DvvVIG~GpaG~~aA~~~~~~--G~~v~lie~~~-~GG~c~n~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 173 (561)
T PRK13748 97 RPLHVAVIGSGGAAMAAALKAVEQ--GARVTLIERGT-IGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTI 173 (561)
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC--CCeEEEEecCc-ceeeccccCccccHHHHHHHHHHHHHhcccccCCccCCCCcc
Confidence 468999999999999999999999 89999999874 2111 1100 000 011 0
Q ss_pred cCccccc------------ccccccC-C-CcEEEEceeEEEEcCCCEEEeCCCe--EEEecEEEEccccccccCCCCCCc
Q psy8791 82 KLSDSRR------------PMKSVLP-S-GATWVKDKIVSFDPENNRVRTQAGS--EISYEYMIVASGIQMYYDRVKGPS 145 (706)
Q Consensus 82 ~~~~~~~------------~~~~~~~-~-~v~~i~~~v~~id~~~~~v~~~~g~--~~~yd~lviAtG~~~~~~~~~g~~ 145 (706)
..+.+.. .+..++. . ++++++++++.+|+....|.+.+|. ++.||+||+|||+.+..|++||.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~i~g~~ 253 (561)
T PRK13748 174 DRSRLLAQQQARVDELRHAKYEGILDGNPAITVLHGEARFKDDQTLIVRLNDGGERVVAFDRCLIATGASPAVPPIPGLK 253 (561)
T ss_pred CHHHHHHHHHHHHHHHhcccHHHHHhccCCeEEEEEEEEEecCCEEEEEeCCCceEEEEcCEEEEcCCCCCCCCCCCCCC
Confidence 0111100 0112222 2 7999999999988766566666653 689999999999999999999831
Q ss_pred ccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCe
Q psy8791 146 ALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPI 225 (706)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v 225 (706)
.. .+ ++... .+. .... +...+
T Consensus 254 -------------------------------------~~------~~---~~~~~--~~~--~~~~---------~~~vv 274 (561)
T PRK13748 254 -------------------------------------ET------PY---WTSTE--ALV--SDTI---------PERLA 274 (561)
T ss_pred -------------------------------------cc------ce---EccHH--Hhh--cccC---------CCeEE
Confidence 00 00 00000 000 0011 11122
Q ss_pred eeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEe
Q psy8791 226 KCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKS 303 (706)
Q Consensus 226 ~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~ 303 (706)
.++|+.. +......+.+.|. +|+++++.. +++ ++++.+.+++.|++.||++++++.+.+++.+++.+...
T Consensus 275 ViGgG~i--g~E~A~~l~~~g~----~Vtli~~~~-~l~~~d~~~~~~l~~~l~~~gI~i~~~~~v~~i~~~~~~~~v~- 346 (561)
T PRK13748 275 VIGSSVV--ALELAQAFARLGS----KVTILARST-LFFREDPAIGEAVTAAFRAEGIEVLEHTQASQVAHVDGEFVLT- 346 (561)
T ss_pred EECCCHH--HHHHHHHHHHcCC----EEEEEecCc-cccccCHHHHHHHHHHHHHCCCEEEcCCEEEEEEecCCEEEEE-
Confidence 2344322 2223345666664 499998753 443 67899999999999999999999999998655544433
Q ss_pred CCCceEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHH
Q psy8791 304 EDKTERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVV 379 (706)
Q Consensus 304 ~~~g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~ 379 (706)
+++ .++++|.||+|+|.+||.. +++.++ .+++|+|.||+ ++| |+.|||||+|||+..+ .....|..||+++
T Consensus 347 ~~~-~~i~~D~vi~a~G~~pn~~~l~l~~~g~~~~~~g~i~vd~-~~~-Ts~~~IyA~GD~~~~~--~~~~~A~~~g~~a 421 (561)
T PRK13748 347 TGH-GELRADKLLVATGRAPNTRSLALDAAGVTVNAQGAIVIDQ-GMR-TSVPHIYAAGDCTDQP--QFVYVAAAAGTRA 421 (561)
T ss_pred ecC-CeEEeCEEEEccCCCcCCCCcCchhcCceECCCCCEeECC-Ccc-cCCCCEEEeeecCCCc--cchhHHHHHHHHH
Confidence 223 4699999999999999954 355677 67889999999 688 8999999999999864 4777899999999
Q ss_pred HHHHH
Q psy8791 380 YDNLS 384 (706)
Q Consensus 380 a~ni~ 384 (706)
|.||.
T Consensus 422 a~~i~ 426 (561)
T PRK13748 422 AINMT 426 (561)
T ss_pred HHHHc
Confidence 99994
No 36
>PRK05976 dihydrolipoamide dehydrogenase; Validated
Probab=99.94 E-value=2.7e-25 Score=245.74 Aligned_cols=283 Identities=18% Similarity=0.241 Sum_probs=188.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCc-------ccccc-------------cCccc------c
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQP-------MFTLI-------------GGGMK------K 82 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p-------~~~~~-------------~~~~~------~ 82 (706)
..+||+|||||+||++||.+|+++ |.+|+|||++.. ..++ .-..+ ..+.. +
T Consensus 3 ~~ydvvVIG~GpaG~~aA~~aa~~--G~~v~lie~~~~-GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 79 (472)
T PRK05976 3 KEYDLVIIGGGPGGYVAAIRAGQL--GLKTALVEKGKL-GGTCLHKGCIPSKALLHSAEVFQTAKKASPFGISVSGPALD 79 (472)
T ss_pred ccccEEEECCCHHHHHHHHHHHhC--CCeEEEEEccCC-CcceEcCCcCchHHHHHHHHHHHHHHHHHhcCccCCCCccC
Confidence 468999999999999999999998 899999998642 2221 10000 00000 0
Q ss_pred Cccc-----------cccccccc-CCCcEEEEceeEEEEcC-------CCEEEeCCC--eEEEecEEEEccccccccCCC
Q psy8791 83 LSDS-----------RRPMKSVL-PSGATWVKDKIVSFDPE-------NNRVRTQAG--SEISYEYMIVASGIQMYYDRV 141 (706)
Q Consensus 83 ~~~~-----------~~~~~~~~-~~~v~~i~~~v~~id~~-------~~~v~~~~g--~~~~yd~lviAtG~~~~~~~~ 141 (706)
...+ ...+.+++ ..++++++++++.+|+. ...|.+.+| .++.||+||+|||+.+..+
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~a~~i~~~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~~~-- 157 (472)
T PRK05976 80 FAKVQERKDGIVDRLTKGVAALLKKGKIDVFHGIGRILGPSIFSPMPGTVSVETETGENEMIIPENLLIATGSRPVEL-- 157 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeCCCCCcCCceEEEEEeCCCceEEEEcCEEEEeCCCCCCCC--
Confidence 0000 00111222 25899999999999987 445666666 5799999999999988643
Q ss_pred CCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecC
Q psy8791 142 KGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFP 221 (706)
Q Consensus 142 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~ 221 (706)
|+.+ +... .+ ++.+.+.. +....
T Consensus 158 p~~~---------------------~~~~--------------------~~---~~~~~~~~----~~~~~--------- 180 (472)
T PRK05976 158 PGLP---------------------FDGE--------------------YV---ISSDEALS----LETLP--------- 180 (472)
T ss_pred CCCC---------------------CCCc--------------------eE---EcchHhhC----ccccC---------
Confidence 4411 0000 00 01111110 11111
Q ss_pred CCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeC--CCC
Q psy8791 222 ATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDL--ANK 297 (706)
Q Consensus 222 ~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~~ 297 (706)
...+.++|++. +......+.+.|. +|+++++.+.+++ ++.+.+.+++.|+++||++++++.|.+++. +++
T Consensus 181 ~~vvIIGgG~~--G~E~A~~l~~~g~----~Vtli~~~~~il~~~~~~~~~~l~~~l~~~gI~i~~~~~v~~i~~~~~~~ 254 (472)
T PRK05976 181 KSLVIVGGGVI--GLEWASMLADFGV----EVTVVEAADRILPTEDAELSKEVARLLKKLGVRVVTGAKVLGLTLKKDGG 254 (472)
T ss_pred CEEEEECCCHH--HHHHHHHHHHcCC----eEEEEEecCccCCcCCHHHHHHHHHHHHhcCCEEEeCcEEEEEEEecCCC
Confidence 11223344432 2223344566653 4999999988876 678888999999999999999999999974 333
Q ss_pred EEEEEeCCCc--eEEeecEEEECCCCCchhh---hhcCCCCCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHH
Q psy8791 298 EAVFKSEDKT--ERLPYAIMHVTPPMGPVPE---LATSRLVDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAV 372 (706)
Q Consensus 298 ~v~~~~~~~g--~~i~~D~vI~a~G~~~~~~---~~~~~l~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a 372 (706)
+....+.+| +++++|.+|+|+|.+|+.. +...++..++|++.||+ +++ |+.|||||+|||+.. ++++..|
T Consensus 255 -~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~~~~~~~g~i~Vd~-~l~-ts~~~IyAiGD~~~~--~~~~~~A 329 (472)
T PRK05976 255 -VLIVAEHNGEEKTLEADKVLVSVGRRPNTEGIGLENTDIDVEGGFIQIDD-FCQ-TKERHIYAIGDVIGE--PQLAHVA 329 (472)
T ss_pred -EEEEEEeCCceEEEEeCEEEEeeCCccCCCCCCchhcCceecCCEEEECC-Ccc-cCCCCEEEeeecCCC--cccHHHH
Confidence 333322344 4799999999999999953 23345544579999999 688 889999999999865 4578899
Q ss_pred HHhHHHHHHHHH
Q psy8791 373 AGQCKVVYDNLS 384 (706)
Q Consensus 373 ~~qg~~~a~ni~ 384 (706)
..||+.+|+||.
T Consensus 330 ~~~g~~aa~~i~ 341 (472)
T PRK05976 330 MAEGEMAAEHIA 341 (472)
T ss_pred HHHHHHHHHHHc
Confidence 999999999983
No 37
>PRK14727 putative mercuric reductase; Provisional
Probab=99.94 E-value=1e-24 Score=241.02 Aligned_cols=282 Identities=17% Similarity=0.205 Sum_probs=189.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-------cccc------------ccc-Ccc------cc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-------PMFT------------LIG-GGM------KK 82 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~~~------------~~~-~~~------~~ 82 (706)
.++||+|||||+||+++|..|++. +.+|+|||+++..... |... ... .+. .+
T Consensus 15 ~~~dvvvIG~G~aG~~~a~~~~~~--g~~v~~ie~~~~~GG~c~n~GciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 92 (479)
T PRK14727 15 LQLHVAIIGSGSAAFAAAIKAAEH--GARVTIIEGADVIGGCCVNVGCVPSKILIRAAQLAHQQRSNPFDGVEAVAPSID 92 (479)
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC--CCeEEEEEccCcceeEeccccccccHHHHHHHHHHHHHhhccccCcccCCCccC
Confidence 468999999999999999999998 8999999997432221 1100 000 000 00
Q ss_pred Cccc-------cc-----ccccccC--CCcEEEEceeEEEEcCCCEEEeCCCe--EEEecEEEEccccccccCCCCCCcc
Q psy8791 83 LSDS-------RR-----PMKSVLP--SGATWVKDKIVSFDPENNRVRTQAGS--EISYEYMIVASGIQMYYDRVKGPSA 146 (706)
Q Consensus 83 ~~~~-------~~-----~~~~~~~--~~v~~i~~~v~~id~~~~~v~~~~g~--~~~yd~lviAtG~~~~~~~~~g~~~ 146 (706)
...+ .. .+..++. .+++++++++.-++...-.|...+|. ++.||+||||||+.+..|++||.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~G~a~f~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~p~i~G~~- 171 (479)
T PRK14727 93 RGLLLHQQQARVEELRHAKYQSILDGNPALTLLKGYARFKDGNTLVVRLHDGGERVLAADRCLIATGSTPTIPPIPGLM- 171 (479)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHhhcCCeEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEecCCCCCCCCCCCcC-
Confidence 0000 00 0122222 37899998887777654455555653 689999999999999999999831
Q ss_pred cccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCee
Q psy8791 147 LINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIK 226 (706)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~ 226 (706)
+. .+ ++... .+.. ... +...+.
T Consensus 172 ------------------------------------~~------~~---~~~~~--~l~~--~~~---------~k~vvV 193 (479)
T PRK14727 172 ------------------------------------DT------PY---WTSTE--ALFS--DEL---------PASLTV 193 (479)
T ss_pred ------------------------------------cc------ce---ecchH--Hhcc--ccC---------CCeEEE
Confidence 00 00 00000 0000 001 111122
Q ss_pred eCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeC
Q psy8791 227 CGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSE 304 (706)
Q Consensus 227 ~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~ 304 (706)
++|+. . +......+.+.|. +|+++++. .+++ ++.+.+.+++.|++.||++++++++++++.+++.+.+. +
T Consensus 194 IGgG~-i-G~E~A~~l~~~G~----~Vtlv~~~-~~l~~~d~~~~~~l~~~L~~~GV~i~~~~~V~~i~~~~~~~~v~-~ 265 (479)
T PRK14727 194 IGSSV-V-AAEIAQAYARLGS----RVTILARS-TLLFREDPLLGETLTACFEKEGIEVLNNTQASLVEHDDNGFVLT-T 265 (479)
T ss_pred ECCCH-H-HHHHHHHHHHcCC----EEEEEEcC-CCCCcchHHHHHHHHHHHHhCCCEEEcCcEEEEEEEeCCEEEEE-E
Confidence 33332 2 2223344566664 48999875 4544 67888999999999999999999999997655544443 2
Q ss_pred CCceEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHH
Q psy8791 305 DKTERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVY 380 (706)
Q Consensus 305 ~~g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a 380 (706)
++ .++++|.+|+|+|.+||.. ++..++ .+++|+|.||+ ++| |+.|||||+|||+..+ ..+..|..||+.+|
T Consensus 266 ~~-g~i~aD~VlvA~G~~pn~~~l~l~~~g~~~~~~G~i~Vd~-~~~-Ts~~~IyA~GD~~~~~--~~~~~A~~~G~~aa 340 (479)
T PRK14727 266 GH-GELRAEKLLISTGRHANTHDLNLEAVGVTTDTSGAIVVNP-AME-TSAPDIYAAGDCSDLP--QFVYVAAAAGSRAG 340 (479)
T ss_pred cC-CeEEeCEEEEccCCCCCccCCCchhhCceecCCCCEEECC-Cee-cCCCCEEEeeecCCcc--hhhhHHHHHHHHHH
Confidence 33 4699999999999999954 345677 67789999999 688 8999999999999864 46778999999999
Q ss_pred HHHH
Q psy8791 381 DNLS 384 (706)
Q Consensus 381 ~ni~ 384 (706)
.||.
T Consensus 341 ~~i~ 344 (479)
T PRK14727 341 INMT 344 (479)
T ss_pred HHHc
Confidence 9994
No 38
>TIGR01423 trypano_reduc trypanothione-disulfide reductase. Trypanothione, a glutathione-modified derivative of spermidine, is (in its reduced form) an important antioxidant found in trypanosomatids (Crithidia, Leishmania, Trypanosoma). This model describes trypanothione reductase, a possible antitrypanosomal drug target closely related to some forms of glutathione reductase.
Probab=99.94 E-value=4.2e-25 Score=242.41 Aligned_cols=283 Identities=16% Similarity=0.231 Sum_probs=188.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCC--------CCcccC-------cccc---------cc----cCccc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPT--------DDHYYQ-------PMFT---------LI----GGGMK 81 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~--------~~~~~~-------p~~~---------~~----~~~~~ 81 (706)
.+||+|||||+||..||..+++.. |.+|+|||++ +.+... |.-. .. ..+..
T Consensus 3 ~~DviVIG~G~~G~~aA~~aa~~~-g~~V~lie~~~~~~~~~~~~~GGtCln~GCiPsK~l~~~a~~~~~~~~~~~~gi~ 81 (486)
T TIGR01423 3 AFDLVVIGAGSGGLEAGWNAATLY-KKRVAVIDVQTHHGPPHYAALGGTCVNVGCVPKKLMVTGAQYMDTLRESAGFGWE 81 (486)
T ss_pred ccCEEEECCChHHHHHHHHHHHhc-CCEEEEEecccCccccccCCccCeecCcCCccHHHHHHHHHHHHHHHHhhccCee
Confidence 589999999999999999999951 6899999974 222221 1100 00 00000
Q ss_pred --------cCcc-----------cccccccccC--CCcEEEEceeEEEEcCCCEEEeCC--------CeEEEecEEEEcc
Q psy8791 82 --------KLSD-----------SRRPMKSVLP--SGATWVKDKIVSFDPENNRVRTQA--------GSEISYEYMIVAS 132 (706)
Q Consensus 82 --------~~~~-----------~~~~~~~~~~--~~v~~i~~~v~~id~~~~~v~~~~--------g~~~~yd~lviAt 132 (706)
+... +...+..+++ .++++++++..-++ .++|.+.+ .+++.||+|||||
T Consensus 82 ~~~~~~~~d~~~~~~~~~~~v~~~~~~~~~~l~~~~gv~~i~G~a~f~~--~~~v~V~~~~~~~~~~~~~~~~d~lIIAT 159 (486)
T TIGR01423 82 FDRSSVKANWKALIAAKNKAVLDINKSYEGMFADTEGLTFFLGWGALED--KNVVLVRESADPKSAVKERLQAEHILLAT 159 (486)
T ss_pred ccCCccccCHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEEEEcc--CCEEEEeeccCCCCCcceEEECCEEEEec
Confidence 0000 0011122233 48999999876555 45565532 2479999999999
Q ss_pred ccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhcc
Q psy8791 133 GIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQ 212 (706)
Q Consensus 133 G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 212 (706)
|+.+..|++||.+ ..+ +.+.+.. +...
T Consensus 160 Gs~p~~p~i~G~~-------------------------------------~~~-----------~~~~~~~----~~~~- 186 (486)
T TIGR01423 160 GSWPQMLGIPGIE-------------------------------------HCI-----------SSNEAFY----LDEP- 186 (486)
T ss_pred CCCCCCCCCCChh-------------------------------------hee-----------chhhhhc----cccC-
Confidence 9999989999821 100 1111110 0011
Q ss_pred CCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceE
Q psy8791 213 SGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALV 290 (706)
Q Consensus 213 ~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~ 290 (706)
+...+.++|+... .+++. .+.... ....+|+++++.+.+++ ++++.+.+++.|+++||++++++.++
T Consensus 187 --------~~~vvIIGgG~iG-~E~A~-~~~~l~-~~G~~Vtli~~~~~il~~~d~~~~~~l~~~L~~~GI~i~~~~~v~ 255 (486)
T TIGR01423 187 --------PRRVLTVGGGFIS-VEFAG-IFNAYK-PRGGKVTLCYRNNMILRGFDSTLRKELTKQLRANGINIMTNENPA 255 (486)
T ss_pred --------CCeEEEECCCHHH-HHHHH-HHHHhc-cCCCeEEEEecCCccccccCHHHHHHHHHHHHHcCCEEEcCCEEE
Confidence 1112233444221 12221 222221 01236999999998876 78899999999999999999999999
Q ss_pred EEeCCCCE-EEEEeCCCceEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCC
Q psy8791 291 EIDLANKE-AVFKSEDKTERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPT 365 (706)
Q Consensus 291 ~i~~~~~~-v~~~~~~~g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~ 365 (706)
+++.+++. ..+ .+++|+++++|.+|+++|.+|+.. +.+.++ .+++|+|.||+ ++| |+.|||||+|||+..
T Consensus 256 ~i~~~~~~~~~v-~~~~g~~i~~D~vl~a~G~~Pn~~~l~l~~~gl~~~~~G~I~Vd~-~l~-Ts~~~IyA~GDv~~~-- 330 (486)
T TIGR01423 256 KVTLNADGSKHV-TFESGKTLDVDVVMMAIGRVPRTQTLQLDKVGVELTKKGAIQVDE-FSR-TNVPNIYAIGDVTDR-- 330 (486)
T ss_pred EEEEcCCceEEE-EEcCCCEEEcCEEEEeeCCCcCcccCCchhhCceECCCCCEecCC-CCc-CCCCCEEEeeecCCC--
Confidence 99754322 222 224677899999999999999954 345677 67889999999 688 899999999999975
Q ss_pred CchHHHHHHhHHHHHHHHH
Q psy8791 366 SKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 366 ~~~~~~a~~qg~~~a~ni~ 384 (706)
+..+..|..||+++|+||.
T Consensus 331 ~~l~~~A~~qG~~aa~ni~ 349 (486)
T TIGR01423 331 VMLTPVAINEGAAFVDTVF 349 (486)
T ss_pred cccHHHHHHHHHHHHHHHh
Confidence 4588889999999999995
No 39
>COG1251 NirB NAD(P)H-nitrite reductase [Energy production and conversion]
Probab=99.94 E-value=8.2e-26 Score=242.30 Aligned_cols=297 Identities=20% Similarity=0.262 Sum_probs=224.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcC-CCeEEEEcCCCCcccC-cccccccCccccCccccccccccc-CCCcEEEE-cee
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLG-KGQVSIVEPTDDHYYQ-PMFTLIGGGMKKLSDSRRPMKSVL-PSGATWVK-DKI 105 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~-~~~Vtlie~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~i~-~~v 105 (706)
+.++||||.|.||..+..++.+..+ .++||++-..++..|. +++..+..+..+.+++...-.++. +.+++++. ..|
T Consensus 3 k~klvvvGnGmag~r~iEell~~~~~~~~iTvfg~Ep~~nY~Ri~Ls~vl~~~~~~edi~l~~~dwy~~~~i~L~~~~~v 82 (793)
T COG1251 3 KQKLVIIGNGMAGHRTIEELLESAPDLYDITVFGEEPRPNYNRILLSSVLAGEKTAEDISLNRNDWYEENGITLYTGEKV 82 (793)
T ss_pred ceeEEEEecccchhhHHHHHHhcCcccceEEEeccCCCccccceeeccccCCCccHHHHhccchhhHHHcCcEEEcCCee
Confidence 4689999999999999999998543 4799999999887666 566666666666677665554544 47999877 689
Q ss_pred EEEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhh
Q psy8791 106 VSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEAL 185 (706)
Q Consensus 106 ~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 185 (706)
+.||+++++|+++.|.++.||.||+||||.|..+++||.+ .+..|..|
T Consensus 83 ~~idr~~k~V~t~~g~~~~YDkLilATGS~pfi~PiPG~~-----------------~~~v~~~R--------------- 130 (793)
T COG1251 83 IQIDRANKVVTTDAGRTVSYDKLIIATGSYPFILPIPGSD-----------------LPGVFVYR--------------- 130 (793)
T ss_pred EEeccCcceEEccCCcEeecceeEEecCccccccCCCCCC-----------------CCCeeEEe---------------
Confidence 9999999999999999999999999999999999999932 22222222
Q ss_pred cCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC-
Q psy8791 186 DQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP- 264 (706)
Q Consensus 186 ~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~- 264 (706)
+.+....+.+. ..-.+ .+++++|+.. ...+..-|...|.. +++++..+.++.
T Consensus 131 -----------~i~D~~am~~~-ar~~~---------~avVIGGGLL--GlEaA~~L~~~Gm~----~~Vvh~~~~lMer 183 (793)
T COG1251 131 -----------TIDDVEAMLDC-ARNKK---------KAVVIGGGLL--GLEAARGLKDLGME----VTVVHIAPTLMER 183 (793)
T ss_pred -----------cHHHHHHHHHH-HhccC---------CcEEEccchh--hhHHHHHHHhCCCc----eEEEeecchHHHH
Confidence 23333333333 22222 2345555522 12223346666654 899998888874
Q ss_pred --chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhh-hcCCCCCCCCceee
Q psy8791 265 --SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPEL-ATSRLVDQSGYVNV 341 (706)
Q Consensus 265 --~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~-~~~~l~~~~G~i~v 341 (706)
++.....+++.+.++|++++++...+++..++ .+..+...||+.+++|+|||++|++||..+ ..+|+.-.+| |.|
T Consensus 184 QLD~~ag~lL~~~le~~Gi~~~l~~~t~ei~g~~-~~~~vr~~DG~~i~ad~VV~a~GIrPn~ela~~aGlavnrG-Ivv 261 (793)
T COG1251 184 QLDRTAGRLLRRKLEDLGIKVLLEKNTEEIVGED-KVEGVRFADGTEIPADLVVMAVGIRPNDELAKEAGLAVNRG-IVV 261 (793)
T ss_pred hhhhHHHHHHHHHHHhhcceeecccchhhhhcCc-ceeeEeecCCCcccceeEEEecccccccHhHHhcCcCcCCC-eee
Confidence 67788889999999999999999888887643 455566679999999999999999999555 4568844445 999
Q ss_pred CccccccCCCCCEEEccccCCCCC--CchHHHHHHhHHHHHHHHHHHHcC
Q psy8791 342 DKATLQHVKYSNVFAIGDCSNLPT--SKTAAAVAGQCKVVYDNLSAVMKN 389 (706)
Q Consensus 342 d~~~l~~~~~~~Ifa~GD~~~~~~--~~~~~~a~~qg~~~a~ni~~~l~g 389 (706)
|+ ++| |+.|+|||+|+|+.... ..+...+..|++++|+++.....+
T Consensus 262 nd-~mq-TsdpdIYAvGEcae~~g~~yGLVaP~yeq~~v~a~hl~~~~~~ 309 (793)
T COG1251 262 ND-YMQ-TSDPDIYAVGECAEHRGKVYGLVAPLYEQAKVLADHLCGGEAE 309 (793)
T ss_pred cc-ccc-ccCCCeeehhhHHHhcCccceehhHHHHHHHHHHHHhccCccc
Confidence 99 688 99999999999998743 356778999999999999755443
No 40
>PRK07846 mycothione reductase; Reviewed
Probab=99.94 E-value=3.3e-25 Score=242.52 Aligned_cols=277 Identities=18% Similarity=0.229 Sum_probs=188.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC------cccc---------cc----cCcc------ccCcc
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ------PMFT---------LI----GGGM------KKLSD 85 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~------p~~~---------~~----~~~~------~~~~~ 85 (706)
+|++|||||+||.+||.. .. |.+|+|||++..-.-+ |.-. .. ..+. .+...
T Consensus 2 yD~vVIG~G~~g~~aa~~--~~--G~~V~lie~~~~GGtC~n~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 77 (451)
T PRK07846 2 YDLIIIGTGSGNSILDER--FA--DKRIAIVEKGTFGGTCLNVGCIPTKMFVYAADVARTIREAARLGVDAELDGVRWPD 77 (451)
T ss_pred CCEEEECCCHHHHHHHHH--HC--CCeEEEEeCCCCCCcccCcCcchhHHHHHHHHHHHHHHHHHhCCccCCCCcCCHHH
Confidence 799999999999998865 34 7899999986531111 2100 00 0010 00000
Q ss_pred -----------cccc-cccc-c-CCCcEEEEceeEEEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCccccccc
Q psy8791 86 -----------SRRP-MKSV-L-PSGATWVKDKIVSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINAL 151 (706)
Q Consensus 86 -----------~~~~-~~~~-~-~~~v~~i~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~ 151 (706)
+... .... + ..+++++.++...+ +.++|.+.+|+++.||+||||||+++..|++||.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~--~~~~V~v~~g~~~~~d~lViATGs~p~~p~i~g~~------ 149 (451)
T PRK07846 78 IVSRVFGRIDPIAAGGEEYRGRDTPNIDVYRGHARFI--GPKTLRTGDGEEITADQVVIAAGSRPVIPPVIADS------ 149 (451)
T ss_pred HHHHHHHHHHHHhccchhhhhhhhCCcEEEEEEEEEe--cCCEEEECCCCEEEeCEEEEcCCCCCCCCCCCCcC------
Confidence 1000 1111 2 36899999988777 46788888887899999999999999988888821
Q ss_pred ccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChh
Q psy8791 152 GHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAP 231 (706)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~ 231 (706)
.. .+ ++.+.+.. +.... .+ .+.++|++
T Consensus 150 -------------------------------~~------~~---~~~~~~~~----l~~~~-~~--------vvIIGgG~ 176 (451)
T PRK07846 150 -------------------------------GV------RY---HTSDTIMR----LPELP-ES--------LVIVGGGF 176 (451)
T ss_pred -------------------------------Cc------cE---EchHHHhh----hhhcC-Ce--------EEEECCCH
Confidence 00 00 11111111 11111 11 12234442
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceE
Q psy8791 232 MKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTER 309 (706)
Q Consensus 232 ~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~ 309 (706)
. +......+++.|. +|+++++.+.+++ ++++.+.+.+.+ +.||++++++++++++.+++.+.+. .++|++
T Consensus 177 i--G~E~A~~l~~~G~----~Vtli~~~~~ll~~~d~~~~~~l~~l~-~~~v~i~~~~~v~~i~~~~~~v~v~-~~~g~~ 248 (451)
T PRK07846 177 I--AAEFAHVFSALGV----RVTVVNRSGRLLRHLDDDISERFTELA-SKRWDVRLGRNVVGVSQDGSGVTLR-LDDGST 248 (451)
T ss_pred H--HHHHHHHHHHcCC----eEEEEEcCCccccccCHHHHHHHHHHH-hcCeEEEeCCEEEEEEEcCCEEEEE-ECCCcE
Confidence 2 2223344666664 4999999988875 577777776654 5689999999999998665545443 346789
Q ss_pred EeecEEEECCCCCchhhh---hcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHH
Q psy8791 310 LPYAIMHVTPPMGPVPEL---ATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 310 i~~D~vI~a~G~~~~~~~---~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~ 384 (706)
+++|.|++|+|.+|+..+ .+.++ .+++|++.||+ ++| |+.|||||+|||+..+ ++++.|.+||+++|+||.
T Consensus 249 i~~D~vl~a~G~~pn~~~l~~~~~gl~~~~~G~i~Vd~-~~~-Ts~p~IyA~GD~~~~~--~l~~~A~~~g~~~a~ni~ 323 (451)
T PRK07846 249 VEADVLLVATGRVPNGDLLDAAAAGVDVDEDGRVVVDE-YQR-TSAEGVFALGDVSSPY--QLKHVANHEARVVQHNLL 323 (451)
T ss_pred eecCEEEEEECCccCccccCchhcCceECCCCcEeECC-Ccc-cCCCCEEEEeecCCCc--cChhHHHHHHHHHHHHHc
Confidence 999999999999999543 45677 67889999999 688 9999999999999863 578899999999999995
No 41
>PRK06115 dihydrolipoamide dehydrogenase; Reviewed
Probab=99.94 E-value=8.2e-25 Score=240.90 Aligned_cols=282 Identities=16% Similarity=0.226 Sum_probs=183.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCccccc-------------c---cC---ccccCc-ccccc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTL-------------I---GG---GMKKLS-DSRRP 89 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~-------------~---~~---~~~~~~-~~~~~ 89 (706)
++||+|||||+||++||.+++++ |.+|+|||+++....++.... . .. .....+ ....+
T Consensus 3 ~~DvvVIG~GpaG~~AA~~aa~~--G~~V~liE~~~~~GG~c~~~gciPsK~l~~~~~~~~~~~~~~~~~~gi~~~~~~~ 80 (466)
T PRK06115 3 SYDVVIIGGGPGGYNAAIRAGQL--GLKVACVEGRSTLGGTCLNVGCMPSKALLHASELYEAASGGEFAHLGIEVKPTLN 80 (466)
T ss_pred cccEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCceeeeeccCcccccHHHHHHhHHHHHHhhhhhhhcCccccCccC
Confidence 47999999999999999999999 999999998543333221100 0 00 000000 00001
Q ss_pred c------------------ccccC-CCcEEEEceeEEEEcCCC-EEEeCCCe--EEEecEEEEccccccccCCCCCCccc
Q psy8791 90 M------------------KSVLP-SGATWVKDKIVSFDPENN-RVRTQAGS--EISYEYMIVASGIQMYYDRVKGPSAL 147 (706)
Q Consensus 90 ~------------------~~~~~-~~v~~i~~~v~~id~~~~-~v~~~~g~--~~~yd~lviAtG~~~~~~~~~g~~~~ 147 (706)
+ ..+++ .+++++.++. .++.+++ .|...+|. +++||+||||||+++. .+||.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a-~~~~~~~v~v~~~~g~~~~~~~d~lVIATGs~p~--~ipg~~-- 155 (466)
T PRK06115 81 LAQMMKQKDESVEALTKGVEFLFRKNKVDWIKGWG-RLDGVGKVVVKAEDGSETQLEAKDIVIATGSEPT--PLPGVT-- 155 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEE-EEccCCEEEEEcCCCceEEEEeCEEEEeCCCCCC--CCCCCC--
Confidence 1 11122 4789998875 4444333 33344553 6899999999999874 467721
Q ss_pred ccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeee
Q psy8791 148 INALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKC 227 (706)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~ 227 (706)
+.. . .+ .+.+.+.. +... +...+.+
T Consensus 156 ---------------------------------~~~----~--~~---~~~~~~~~----~~~~---------~~~vvII 180 (466)
T PRK06115 156 ---------------------------------IDN----Q--RI---IDSTGALS----LPEV---------PKHLVVI 180 (466)
T ss_pred ---------------------------------CCC----C--eE---ECHHHHhC----CccC---------CCeEEEE
Confidence 000 0 00 11111100 0011 1122233
Q ss_pred CChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEE--Ee
Q psy8791 228 GGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVF--KS 303 (706)
Q Consensus 228 ~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~--~~ 303 (706)
+|++. +......+.+.|. +|+++++.+++++ ++++.+.+++.|++.||++++++.+.+++.+++.+.+ ..
T Consensus 181 GgG~i--g~E~A~~l~~~G~----~Vtlie~~~~il~~~d~~~~~~l~~~l~~~gV~i~~~~~V~~i~~~~~~v~v~~~~ 254 (466)
T PRK06115 181 GAGVI--GLELGSVWRRLGA----QVTVVEYLDRICPGTDTETAKTLQKALTKQGMKFKLGSKVTGATAGADGVSLTLEP 254 (466)
T ss_pred CCCHH--HHHHHHHHHHcCC----eEEEEeCCCCCCCCCCHHHHHHHHHHHHhcCCEEEECcEEEEEEEcCCeEEEEEEE
Confidence 44432 2223345666664 4999999988876 6778899999999999999999999999865443432 21
Q ss_pred C--CCceEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHH
Q psy8791 304 E--DKTERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCK 377 (706)
Q Consensus 304 ~--~~g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~ 377 (706)
. ++++++++|.|++++|.+|+.. +...++ .+++| +.||+ +++ |+.|+|||+|||+.. |++++.|..||+
T Consensus 255 ~~~g~~~~i~~D~vi~a~G~~pn~~~l~~~~~g~~~~~~G-~~vd~-~~~-Ts~~~IyA~GD~~~~--~~la~~A~~~g~ 329 (466)
T PRK06115 255 AAGGAAETLQADYVLVAIGRRPYTQGLGLETVGLETDKRG-MLAND-HHR-TSVPGVWVIGDVTSG--PMLAHKAEDEAV 329 (466)
T ss_pred cCCCceeEEEeCEEEEccCCccccccCCcccccceeCCCC-EEECC-Cee-cCCCCEEEeeecCCC--cccHHHHHHHHH
Confidence 1 2346899999999999999954 334566 55667 67898 577 899999999999986 458999999999
Q ss_pred HHHHHHH
Q psy8791 378 VVYDNLS 384 (706)
Q Consensus 378 ~~a~ni~ 384 (706)
++|+||.
T Consensus 330 ~aa~~i~ 336 (466)
T PRK06115 330 ACIERIA 336 (466)
T ss_pred HHHHHHc
Confidence 9999995
No 42
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric. This protein is homologous to the small subunit of NADPH and NADH forms of glutamate synthase as found in eukaryotes and some bacteria. This protein is found in numerous species having no homolog of the glutamate synthase large subunit. The prototype of the family, from Pyrococcus sp. KOD1, was shown to be active as a homotetramer and to require NADPH.
Probab=99.94 E-value=1.7e-25 Score=244.58 Aligned_cols=318 Identities=17% Similarity=0.125 Sum_probs=189.9
Q ss_pred Cccccccccccccccc---cccCCCCCCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCc
Q psy8791 3 SLKLCPLKSYNLLSSS---FSTSPLSSSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGG 79 (706)
Q Consensus 3 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~ 79 (706)
.+.|.+++.|...... ............++|+|||||+|||+||..|+++ +++|+|||+++....... ..++..
T Consensus 103 ~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~V~IIG~G~aGl~aA~~l~~~--G~~V~vie~~~~~GG~l~-~gip~~ 179 (449)
T TIGR01316 103 PVSIGALERFVADWERQHGIETEPEKAPSTHKKVAVIGAGPAGLACASELAKA--GHSVTVFEALHKPGGVVT-YGIPEF 179 (449)
T ss_pred CccHHHHHHHHHhHHHhcCCCcCCCCCCCCCCEEEEECcCHHHHHHHHHHHHC--CCcEEEEecCCCCCcEee-ecCCCc
Confidence 4566666666543221 1111111233457999999999999999999998 899999999875321111 011111
Q ss_pred cccCcccccccccccCCCcEEEEceeEEEEcCCCEEEeCCCeEEEecEEEEcccc-ccccCCCCCCcccccccccccccc
Q psy8791 80 MKKLSDSRRPMKSVLPSGATWVKDKIVSFDPENNRVRTQAGSEISYEYMIVASGI-QMYYDRVKGPSALINALGHCDLVR 158 (706)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~i~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~-~~~~~~~~g~~~~~~~~~~~~~~~ 158 (706)
....+.+......+...+++++.+.+. .+.+++++. ...||+||+|||+ .+..+++||.+ ..|
T Consensus 180 ~~~~~~~~~~~~~l~~~gv~~~~~~~v-----~~~v~~~~~-~~~yd~viiAtGa~~p~~~~ipG~~----~~g------ 243 (449)
T TIGR01316 180 RLPKEIVVTEIKTLKKLGVTFRMNFLV-----GKTATLEEL-FSQYDAVFIGTGAGLPKLMNIPGEE----LCG------ 243 (449)
T ss_pred cCCHHHHHHHHHHHHhCCcEEEeCCcc-----CCcCCHHHH-HhhCCEEEEeCCCCCCCcCCCCCCC----CCC------
Confidence 111112222233444578999887643 233444443 3579999999998 68888888832 000
Q ss_pred cccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHH--hccCCCEEEecCCCCeeeCChhHHHHH
Q psy8791 159 SFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQ--HFQSGPVLYTFPATPIKCGGAPMKAVL 236 (706)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~--~~~~g~~vv~~~~~~v~~~g~~~~~~~ 236 (706)
+ ++............ .+.....-...+...++++|+. .+.
T Consensus 244 ---------------------------------v---~~~~~~l~~~~~~~~~~~~~~~~~~~~gk~VvVIGgG~--~a~ 285 (449)
T TIGR01316 244 ---------------------------------V---YSANDFLTRANLMKAYEFPHADTPVYAGKSVVVIGGGN--TAV 285 (449)
T ss_pred ---------------------------------c---EEHHHHHHHHhhcccccccccCCcccCCCeEEEECCCH--HHH
Confidence 0 00000000000000 0000000000112223344442 233
Q ss_pred HHHHHHHHcCCCCCcEEEEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCC-CCEE---EEEe---------
Q psy8791 237 IGDEYLRKHKKRDAAKLTYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLA-NKEA---VFKS--------- 303 (706)
Q Consensus 237 ~~~~~l~~~g~~~~~~v~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~-~~~v---~~~~--------- 303 (706)
..+..+.+.|. +|+++++....-. + ......+.+++.||++++++.+.++..+ ++.+ .+..
T Consensus 286 d~A~~l~~~G~----~Vtlv~~~~~~~~-~-~~~~~~~~l~~~GV~~~~~~~~~~i~~~~~g~v~~v~~~~~~~~~~~~~ 359 (449)
T TIGR01316 286 DSARTALRLGA----EVHCLYRRTREDM-T-ARVEEIAHAEEEGVKFHFLCQPVEIIGDEEGNVRAVKFRKMDCQEQIDS 359 (449)
T ss_pred HHHHHHHHcCC----EEEEEeecCcccC-C-CCHHHHHHHHhCCCEEEeccCcEEEEEcCCCeEEEEEEEEEEecCcCCC
Confidence 33445666664 3888887654211 1 1223346678899999999999998753 3333 2220
Q ss_pred --------CCCceEEeecEEEECCCCCchhh-hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHH
Q psy8791 304 --------EDKTERLPYAIMHVTPPMGPVPE-LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVA 373 (706)
Q Consensus 304 --------~~~g~~i~~D~vI~a~G~~~~~~-~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~ 373 (706)
.++..++++|+||+++|+.|+.. +...++ .+++|+|.||+ +++ |+.|+|||+|||+.. +.++..|+
T Consensus 360 g~~~~~~~~~~~~~i~~D~Vi~AiG~~p~~~~l~~~gl~~~~~G~i~vd~-~~~-Ts~~~VfA~GD~~~g--~~~v~~Ai 435 (449)
T TIGR01316 360 GERRFLPCGDAECKLEADAVIVAIGNGSNPIMAETTRLKTSERGTIVVDE-DQR-TSIPGVFAGGDIILG--AATVIRAM 435 (449)
T ss_pred CCeeeeecCCceEEEECCEEEECCCCCCCchhhhccCcccCCCCeEEeCC-CCc-cCCCCEEEecCCCCC--cHHHHHHH
Confidence 01123799999999999999954 445677 67789999998 677 899999999999875 45788999
Q ss_pred HhHHHHHHHHHHHH
Q psy8791 374 GQCKVVYDNLSAVM 387 (706)
Q Consensus 374 ~qg~~~a~ni~~~l 387 (706)
.||+.+|.+|.++|
T Consensus 436 ~~G~~AA~~I~~~L 449 (449)
T TIGR01316 436 GQGKRAAKSINEYL 449 (449)
T ss_pred HHHHHHHHHHHhhC
Confidence 99999999998754
No 43
>TIGR01438 TGR thioredoxin and glutathione reductase selenoprotein. This homodimeric, FAD-containing member of the pyridine nucleotide disulfide oxidoreductase family contains a C-terminal motif Cys-SeCys-Gly, where SeCys is selenocysteine encoded by TGA (in some sequence reports interpreted as a stop codon). In some members of this subfamily, Cys-SeCys-Gly is replaced by Cys-Cys-Gly. The reach of the selenium atom at the C-term arm of the protein is proposed to allow broad substrate specificity.
Probab=99.94 E-value=1.7e-24 Score=238.34 Aligned_cols=281 Identities=14% Similarity=0.194 Sum_probs=185.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC--------CcccC-------cccc---------ccc-Cccc--c
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD--------DHYYQ-------PMFT---------LIG-GGMK--K 82 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~--------~~~~~-------p~~~---------~~~-~~~~--~ 82 (706)
.+|+||||||+||+.||..+++. |.+|+|||+.. ..... |.-. ... ...+ .
T Consensus 2 ~yDvvVIG~G~aG~~aA~~aa~~--G~~v~lie~~~~~~~~~~~~~GGtc~n~GCiPsK~l~~~a~~~~~~~~~~~~g~~ 79 (484)
T TIGR01438 2 DYDLIVIGGGSGGLAAAKEAADY--GAKVMLLDFVTPTPLGTRWGIGGTCVNVGCIPKKLMHQAALLGQALKDSRNYGWN 79 (484)
T ss_pred ccCEEEECCCHHHHHHHHHHHHC--CCeEEEEeccCCCCCCcceeccccccccCcCchhHHHHHHHHHHHHhhhhhcCcc
Confidence 47999999999999999999998 89999999731 11111 1100 000 0000 0
Q ss_pred Ccc-cc------------------cccccccC-CCcEEEEceeEEEEcCCCEEEeC--CC--eEEEecEEEEcccccccc
Q psy8791 83 LSD-SR------------------RPMKSVLP-SGATWVKDKIVSFDPENNRVRTQ--AG--SEISYEYMIVASGIQMYY 138 (706)
Q Consensus 83 ~~~-~~------------------~~~~~~~~-~~v~~i~~~v~~id~~~~~v~~~--~g--~~~~yd~lviAtG~~~~~ 138 (706)
... .. ..+..++. .++++++++..-+++. +|.+. +| .+++||+||||||+.+..
T Consensus 80 ~~~~~~~d~~~~~~~~~~~v~~~~~~~~~~~~~~~v~~i~G~a~f~~~~--~v~v~~~~g~~~~~~~d~lVIATGs~p~~ 157 (484)
T TIGR01438 80 VEETVKHDWNRLSEAVQNHIGSLNWGYRVALREKKVNYENAYAEFVDKH--RIKATNKKGKEKIYSAERFLIATGERPRY 157 (484)
T ss_pred cCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCC--EEEEeccCCCceEEEeCEEEEecCCCCCC
Confidence 000 00 01112223 6899999998888754 44443 33 369999999999999998
Q ss_pred CCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEE
Q psy8791 139 DRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLY 218 (706)
Q Consensus 139 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv 218 (706)
|++||.+ ++. .+.+.+.. +....
T Consensus 158 p~ipG~~--~~~---------------------------------------------~~~~~~~~----~~~~~------ 180 (484)
T TIGR01438 158 PGIPGAK--ELC---------------------------------------------ITSDDLFS----LPYCP------ 180 (484)
T ss_pred CCCCCcc--cee---------------------------------------------ecHHHhhc----ccccC------
Confidence 9999831 000 00111110 00111
Q ss_pred ecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCC
Q psy8791 219 TFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLAN 296 (706)
Q Consensus 219 ~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~ 296 (706)
...+.++|+.. +......+.+.|. +|+++++ +.+++ ++++.+.+++.|+++||++++++.+.+++..+
T Consensus 181 ---~~vvIIGgG~i--G~E~A~~l~~~G~----~Vtli~~-~~~l~~~d~~~~~~l~~~L~~~gV~i~~~~~v~~v~~~~ 250 (484)
T TIGR01438 181 ---GKTLVVGASYV--ALECAGFLAGIGL----DVTVMVR-SILLRGFDQDCANKVGEHMEEHGVKFKRQFVPIKVEQIE 250 (484)
T ss_pred ---CCEEEECCCHH--HHHHHHHHHHhCC----cEEEEEe-cccccccCHHHHHHHHHHHHHcCCEEEeCceEEEEEEcC
Confidence 12223344422 2233345566664 3888886 45655 68899999999999999999999988887644
Q ss_pred CEEEEEeCCC--ceEEeecEEEECCCCCchhh---hhcCCC-CCC-CCceeeCccccccCCCCCEEEccccCCCCCCchH
Q psy8791 297 KEAVFKSEDK--TERLPYAIMHVTPPMGPVPE---LATSRL-VDQ-SGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTA 369 (706)
Q Consensus 297 ~~v~~~~~~~--g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~-~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~ 369 (706)
+.+.+...++ ++++++|.||+++|.+||.. +++.++ .++ +|+|.||+ ++| |+.|+|||+|||+... +.++
T Consensus 251 ~~~~v~~~~~~~~~~i~~D~vl~a~G~~pn~~~l~l~~~gv~~~~~~G~I~Vd~-~~~-Ts~p~IyA~GDv~~~~-~~l~ 327 (484)
T TIGR01438 251 AKVKVTFTDSTNGIEEEYDTVLLAIGRDACTRKLNLENVGVKINKKTGKIPADE-EEQ-TNVPYIYAVGDILEDK-QELT 327 (484)
T ss_pred CeEEEEEecCCcceEEEeCEEEEEecCCcCCCcCCcccccceecCcCCeEecCC-Ccc-cCCCCEEEEEEecCCC-ccch
Confidence 4433322221 35799999999999999964 355677 444 59999999 677 8999999999999642 3577
Q ss_pred HHHHHhHHHHHHHHH
Q psy8791 370 AAVAGQCKVVYDNLS 384 (706)
Q Consensus 370 ~~a~~qg~~~a~ni~ 384 (706)
..|..||+.+|+||.
T Consensus 328 ~~A~~~g~~aa~~i~ 342 (484)
T TIGR01438 328 PVAIQAGRLLAQRLF 342 (484)
T ss_pred HHHHHHHHHHHHHHh
Confidence 889999999999995
No 44
>PRK06292 dihydrolipoamide dehydrogenase; Validated
Probab=99.93 E-value=1.5e-24 Score=239.58 Aligned_cols=280 Identities=17% Similarity=0.220 Sum_probs=187.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCccc----c------------c---cc-Cc------cccC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMF----T------------L---IG-GG------MKKL 83 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~----~------------~---~~-~~------~~~~ 83 (706)
.+||||||||+||++||.+|++. +.+|+|||++. +...+.. | . .. .+ ..+.
T Consensus 3 ~yDvvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~-~GG~~~~~gc~psk~l~~~~~~~~~~~~~~~~gi~~~~~~~~~ 79 (460)
T PRK06292 3 KYDVIVIGAGPAGYVAARRAAKL--GKKVALIEKGP-LGGTCLNVGCIPSKALIAAAEAFHEAKHAEEFGIHADGPKIDF 79 (460)
T ss_pred cccEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCc-cccceeccceeeHHHHHHHHHHHHHHHHHHhcCCCcCCCccCH
Confidence 47999999999999999999998 89999999943 2221110 0 0 00 00 0011
Q ss_pred ccccc-----------cc-ccc-cCCCcEEEEceeEEEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccc
Q psy8791 84 SDSRR-----------PM-KSV-LPSGATWVKDKIVSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINA 150 (706)
Q Consensus 84 ~~~~~-----------~~-~~~-~~~~v~~i~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~ 150 (706)
..+.. .+ ... ...+++++.+++..++. +.+.+ ++.++.||+||+|||+. .|.+||.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~--~~v~v-~~~~~~~d~lIiATGs~--~p~ipg~~----- 149 (460)
T PRK06292 80 KKVMARVRRERDRFVGGVVEGLEKKPKIDKIKGTARFVDP--NTVEV-NGERIEAKNIVIATGSR--VPPIPGVW----- 149 (460)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHhhCCCEEEEEEEEEccC--CEEEE-CcEEEEeCEEEEeCCCC--CCCCCCCc-----
Confidence 11100 01 111 12578888888777765 34555 56789999999999998 56778821
Q ss_pred cccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCCh
Q psy8791 151 LGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGA 230 (706)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~ 230 (706)
.. ... .+ ++.+.+.. +... +...+.++|+
T Consensus 150 --------------------------------~~-~~~--~~---~~~~~~~~----~~~~---------~k~v~VIGgG 178 (460)
T PRK06292 150 --------------------------------LI-LGD--RL---LTSDDAFE----LDKL---------PKSLAVIGGG 178 (460)
T ss_pred --------------------------------cc-CCC--cE---ECchHHhC----cccc---------CCeEEEECCC
Confidence 00 000 11 11111110 1111 1122233444
Q ss_pred hHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCC-EEEEEe-CCC
Q psy8791 231 PMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANK-EAVFKS-EDK 306 (706)
Q Consensus 231 ~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~-~v~~~~-~~~ 306 (706)
+. +......+.+.|. +|+++++.+.+++ ++++.+.+++.|+++ |++++++++.+++.+++ .+++.. .++
T Consensus 179 ~~--g~E~A~~l~~~g~----~Vtli~~~~~~l~~~d~~~~~~~~~~l~~~-I~i~~~~~v~~i~~~~~~~v~~~~~~~~ 251 (460)
T PRK06292 179 VI--GLELGQALSRLGV----KVTVFERGDRILPLEDPEVSKQAQKILSKE-FKIKLGAKVTSVEKSGDEKVEELEKGGK 251 (460)
T ss_pred HH--HHHHHHHHHHcCC----cEEEEecCCCcCcchhHHHHHHHHHHHhhc-cEEEcCCEEEEEEEcCCceEEEEEcCCc
Confidence 32 2223344666664 4999999998886 678889999999999 99999999999986543 344321 234
Q ss_pred ceEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHH
Q psy8791 307 TERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDN 382 (706)
Q Consensus 307 g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~n 382 (706)
++++++|.+++++|.+|+.. ++..++ .+++|++.||+ ++| |+.|||||+|||+.. ++++..|..||+++|.|
T Consensus 252 ~~~i~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~g~i~vd~-~~~-ts~~~IyA~GD~~~~--~~~~~~A~~qg~~aa~~ 327 (460)
T PRK06292 252 TETIEADYVLVATGRRPNTDGLGLENTGIELDERGRPVVDE-HTQ-TSVPGIYAAGDVNGK--PPLLHEAADEGRIAAEN 327 (460)
T ss_pred eEEEEeCEEEEccCCccCCCCCCcHhhCCEecCCCcEeECC-Ccc-cCCCCEEEEEecCCC--ccchhHHHHHHHHHHHH
Confidence 46799999999999999954 455677 67889999999 688 799999999999976 34788999999999999
Q ss_pred HH
Q psy8791 383 LS 384 (706)
Q Consensus 383 i~ 384 (706)
|.
T Consensus 328 i~ 329 (460)
T PRK06292 328 AA 329 (460)
T ss_pred hc
Confidence 95
No 45
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=99.93 E-value=1.1e-24 Score=244.13 Aligned_cols=292 Identities=17% Similarity=0.200 Sum_probs=187.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcc---cccccCcc-ccCccccccccccc-CCCcEEEEc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPM---FTLIGGGM-KKLSDSRRPMKSVL-PSGATWVKD 103 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~---~~~~~~~~-~~~~~~~~~~~~~~-~~~v~~i~~ 103 (706)
+.+||+|||||+|||+||.+|+++ +++|+|||+++....... ....++.. .....+...+.+.. ..+++++.+
T Consensus 3 ~~yDVvIIGgGpAGL~AA~~lar~--g~~V~liE~~~~GG~~~~~~~i~~~pg~~~~~~~~l~~~l~~~~~~~gv~~~~~ 80 (555)
T TIGR03143 3 EIYDLIIIGGGPAGLSAGIYAGRA--KLDTLIIEKDDFGGQITITSEVVNYPGILNTTGPELMQEMRQQAQDFGVKFLQA 80 (555)
T ss_pred CcCcEEEECCCHHHHHHHHHHHHC--CCCEEEEecCCCCceEEeccccccCCCCcCCCHHHHHHHHHHHHHHcCCEEecc
Confidence 458999999999999999999998 899999999763211110 11111100 11112222222222 358899889
Q ss_pred eeEEEEcCCC--EEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccch
Q psy8791 104 KIVSFDPENN--RVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGL 181 (706)
Q Consensus 104 ~v~~id~~~~--~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 181 (706)
+|++++.+.+ .+.+.++ .+.||+||+|||+.+..+++||.+ + +..+
T Consensus 81 ~V~~i~~~~~~~~V~~~~g-~~~a~~lVlATGa~p~~~~ipG~~--~------------------~~~~----------- 128 (555)
T TIGR03143 81 EVLDVDFDGDIKTIKTARG-DYKTLAVLIATGASPRKLGFPGEE--E------------------FTGR----------- 128 (555)
T ss_pred EEEEEEecCCEEEEEecCC-EEEEeEEEECCCCccCCCCCCCHH--H------------------hCCc-----------
Confidence 9999998664 4555555 689999999999999989999921 0 0000
Q ss_pred hhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCc
Q psy8791 182 QEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGV 261 (706)
Q Consensus 182 ~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~ 261 (706)
.+......+. . .+.+.++ +.++|+.. +......+.+.|. +|+++++.+.
T Consensus 129 ---------~v~~~~~~~~------~--~~~g~~V--------vVIGgG~~--g~E~A~~L~~~g~----~Vtli~~~~~ 177 (555)
T TIGR03143 129 ---------GVAYCATCDG------E--FFTGMDV--------FVIGGGFA--AAEEAVFLTRYAS----KVTVIVREPD 177 (555)
T ss_pred ---------eEEEEeecCh------h--hcCCCEE--------EEECCCHH--HHHHHHHHHccCC----EEEEEEeCCc
Confidence 1110000000 0 0112222 23344432 2222334555553 5999998876
Q ss_pred CCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCE--EEEEeCCCceEE----eecE----EEECCCCCchhhhhcCC
Q psy8791 262 LFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKE--AVFKSEDKTERL----PYAI----MHVTPPMGPVPELATSR 331 (706)
Q Consensus 262 ~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~--v~~~~~~~g~~i----~~D~----vI~a~G~~~~~~~~~~~ 331 (706)
+...+. ...+.++.+||++++++.|.++..++.. +.+....+|++. ++|. |++++|++|+..+.+.+
T Consensus 178 ~~~~~~---~~~~~~~~~gV~i~~~~~V~~i~~~~~v~~v~~~~~~~G~~~~~~~~~D~~~~~Vi~a~G~~Pn~~l~~~~ 254 (555)
T TIGR03143 178 FTCAKL---IAEKVKNHPKIEVKFNTELKEATGDDGLRYAKFVNNVTGEITEYKAPKDAGTFGVFVFVGYAPSSELFKGV 254 (555)
T ss_pred cccCHH---HHHHHHhCCCcEEEeCCEEEEEEcCCcEEEEEEEECCCCCEEEEeccccccceEEEEEeCCCCChhHHhhh
Confidence 543222 2233445679999999999999875532 223333345432 3676 99999999997666655
Q ss_pred C-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCCC
Q psy8791 332 L-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNRA 391 (706)
Q Consensus 332 l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~~ 391 (706)
+ ++++|+|.||+ +++ |+.|||||+|||+... +..+..|..||+.+|.||.+++.+.+
T Consensus 255 l~l~~~G~I~vd~-~~~-Ts~p~IyAaGDv~~~~-~~~v~~A~~~G~~Aa~~i~~~l~~~~ 312 (555)
T TIGR03143 255 VELDKRGYIPTNE-DME-TNVPGVYAAGDLRPKE-LRQVVTAVADGAIAATSAERYVKELK 312 (555)
T ss_pred cccCCCCeEEeCC-ccc-cCCCCEEEceeccCCC-cchheeHHhhHHHHHHHHHHHHHhhh
Confidence 6 67789999999 687 7999999999997542 34556899999999999999997654
No 46
>PRK12831 putative oxidoreductase; Provisional
Probab=99.93 E-value=1.9e-24 Score=236.66 Aligned_cols=321 Identities=15% Similarity=0.131 Sum_probs=189.1
Q ss_pred Ccccccccccccccc---ccccCCCCCCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCc
Q psy8791 3 SLKLCPLKSYNLLSS---SFSTSPLSSSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGG 79 (706)
Q Consensus 3 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~ 79 (706)
.+.|+.++.|..... +... ........++|+|||||+|||+||.+|+++ |++|+|+|+++....... ..++..
T Consensus 111 ~v~I~~l~r~~~~~~~~~~~~~-~~~~~~~~~~V~IIG~GpAGl~aA~~l~~~--G~~V~v~e~~~~~GG~l~-~gip~~ 186 (464)
T PRK12831 111 PVAIGKLERFVADWARENGIDL-SETEEKKGKKVAVIGSGPAGLTCAGDLAKM--GYDVTIFEALHEPGGVLV-YGIPEF 186 (464)
T ss_pred CeehhHHHHHHHHHHHHcCCCC-CCCcCCCCCEEEEECcCHHHHHHHHHHHhC--CCeEEEEecCCCCCCeee-ecCCCc
Confidence 466777777655322 1211 112334568999999999999999999998 899999998775321111 011111
Q ss_pred cccCcccc-cccccccCCCcEEEEceeEEEEcCCCEEEeCCC-eEEEecEEEEcccc-ccccCCCCCCcccccccccccc
Q psy8791 80 MKKLSDSR-RPMKSVLPSGATWVKDKIVSFDPENNRVRTQAG-SEISYEYMIVASGI-QMYYDRVKGPSALINALGHCDL 156 (706)
Q Consensus 80 ~~~~~~~~-~~~~~~~~~~v~~i~~~v~~id~~~~~v~~~~g-~~~~yd~lviAtG~-~~~~~~~~g~~~~~~~~~~~~~ 156 (706)
....+.+. ...+.+...++++..+.... +.+.+++. ..+.||+|++|||+ .+..+++||.+ ..|
T Consensus 187 ~l~~~~~~~~~~~~~~~~gv~i~~~~~v~-----~~v~~~~~~~~~~~d~viiAtGa~~~~~l~ipG~~----~~g---- 253 (464)
T PRK12831 187 RLPKETVVKKEIENIKKLGVKIETNVVVG-----KTVTIDELLEEEGFDAVFIGSGAGLPKFMGIPGEN----LNG---- 253 (464)
T ss_pred cCCccHHHHHHHHHHHHcCCEEEcCCEEC-----CcCCHHHHHhccCCCEEEEeCCCCCCCCCCCCCcC----CcC----
Confidence 11111111 11233334688887765431 23334332 24579999999998 58888889832 000
Q ss_pred cccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccC-CCEEEecCCCCeeeCChhHHHH
Q psy8791 157 VRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQS-GPVLYTFPATPIKCGGAPMKAV 235 (706)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~-g~~vv~~~~~~v~~~g~~~~~~ 235 (706)
. ++...+.........+.. -......+...++++|+. .+
T Consensus 254 ---------V-----------------------------~~~~~~l~~~~~~~~~~~~~~~~~~~gk~VvVIGgG~--va 293 (464)
T PRK12831 254 ---------V-----------------------------FSANEFLTRVNLMKAYKPEYDTPIKVGKKVAVVGGGN--VA 293 (464)
T ss_pred ---------c-----------------------------EEHHHHHHHHHhcccccccccCcccCCCeEEEECCcH--HH
Confidence 0 011111000000000000 000000112223344442 23
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeCCCc-CCCchhHHHHHHHHHHhCCceEEcCCceEEEeCC-CCEE---EEE--e-----
Q psy8791 236 LIGDEYLRKHKKRDAAKLTYCTGMGV-LFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLA-NKEA---VFK--S----- 303 (706)
Q Consensus 236 ~~~~~~l~~~g~~~~~~v~l~~~~~~-~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~-~~~v---~~~--~----- 303 (706)
...+..+.+.|. +|+++.+... -++ .. ...+ +.+++.||++++++.+.++..+ ++.+ .+. .
T Consensus 294 ~d~A~~l~r~Ga----~Vtlv~r~~~~~m~-a~-~~e~-~~a~~eGV~i~~~~~~~~i~~~~~g~v~~v~~~~~~~~~~d 366 (464)
T PRK12831 294 MDAARTALRLGA----EVHIVYRRSEEELP-AR-VEEV-HHAKEEGVIFDLLTNPVEILGDENGWVKGMKCIKMELGEPD 366 (464)
T ss_pred HHHHHHHHHcCC----EEEEEeecCcccCC-CC-HHHH-HHHHHcCCEEEecccceEEEecCCCeEEEEEEEEEEecCcC
Confidence 333445666664 3888876543 222 11 1222 3456789999999999998643 3333 221 0
Q ss_pred ----------CCCceEEeecEEEECCCCCchhhhh-c-CCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHH
Q psy8791 304 ----------EDKTERLPYAIMHVTPPMGPVPELA-T-SRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAA 370 (706)
Q Consensus 304 ----------~~~g~~i~~D~vI~a~G~~~~~~~~-~-~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~ 370 (706)
.++..++++|+||+++|+.|+..+. . .++ .+++|++.||+++++ |+.|+|||+|||+.. +.+..
T Consensus 367 ~~Gr~~~~~~~g~~~~i~~D~Vi~AiG~~p~~~~~~~~~gl~~~~~G~i~vd~~~~~-Ts~pgVfAaGD~~~g--~~~v~ 443 (464)
T PRK12831 367 ASGRRRPVEIEGSEFVLEVDTVIMSLGTSPNPLISSTTKGLKINKRGCIVADEETGL-TSKEGVFAGGDAVTG--AATVI 443 (464)
T ss_pred CCCCccceecCCceEEEECCEEEECCCCCCChhhhcccCCceECCCCcEEECCCCCc-cCCCCEEEeCCCCCC--chHHH
Confidence 0112369999999999999996544 3 467 677899999983355 899999999999875 44788
Q ss_pred HHHHhHHHHHHHHHHHHcCC
Q psy8791 371 AVAGQCKVVYDNLSAVMKNR 390 (706)
Q Consensus 371 ~a~~qg~~~a~ni~~~l~g~ 390 (706)
.|+.+|+.+|.+|.++|.++
T Consensus 444 ~Ai~~G~~AA~~I~~~L~~~ 463 (464)
T PRK12831 444 LAMGAGKKAAKAIDEYLSKK 463 (464)
T ss_pred HHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999998764
No 47
>PRK06327 dihydrolipoamide dehydrogenase; Validated
Probab=99.93 E-value=6.7e-24 Score=234.43 Aligned_cols=283 Identities=17% Similarity=0.222 Sum_probs=186.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCC------CCcccC-------cc--c-c------cc-----cCcccc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPT------DDHYYQ-------PM--F-T------LI-----GGGMKK 82 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~------~~~~~~-------p~--~-~------~~-----~~~~~~ 82 (706)
.+|++|||||+||++||.++++. +.+|+|||+. ...... |. + . .. ..+. .
T Consensus 4 ~~DviIIG~G~aG~~aA~~~~~~--g~~v~lie~~~~~~g~~~~Gg~c~n~gc~P~k~l~~~a~~~~~~~~~~~~~G~-~ 80 (475)
T PRK06327 4 QFDVVVIGAGPGGYVAAIRAAQL--GLKVACIEAWKNPKGKPALGGTCLNVGCIPSKALLASSEEFENAGHHFADHGI-H 80 (475)
T ss_pred ceeEEEECCCHHHHHHHHHHHhC--CCeEEEEecccCCCCCCCcCCccccccccHHHHHHHHHHHHHHHHhhHHhcCc-c
Confidence 57999999999999999999998 8999999981 211111 11 0 0 00 0000 0
Q ss_pred Cccccc------------------ccccccC-CCcEEEEceeEEEEc--CCCEEEeC--CCeEEEecEEEEccccccccC
Q psy8791 83 LSDSRR------------------PMKSVLP-SGATWVKDKIVSFDP--ENNRVRTQ--AGSEISYEYMIVASGIQMYYD 139 (706)
Q Consensus 83 ~~~~~~------------------~~~~~~~-~~v~~i~~~v~~id~--~~~~v~~~--~g~~~~yd~lviAtG~~~~~~ 139 (706)
...... .+..+++ .+++++.+++..++. +..+|.+. ++.+++||+||+|||+.+..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~~~v~v~~~~~~~~~~d~lViATGs~p~~~ 160 (475)
T PRK06327 81 VDGVKIDVAKMIARKDKVVKKMTGGIEGLFKKNKITVLKGRGSFVGKTDAGYEIKVTGEDETVITAKHVIIATGSEPRHL 160 (475)
T ss_pred CCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCCCCCEEEEecCCCeEEEeCEEEEeCCCCCCCC
Confidence 000000 1112222 589999999888773 24566664 345799999999999988643
Q ss_pred CCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEe
Q psy8791 140 RVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYT 219 (706)
Q Consensus 140 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~ 219 (706)
|+.+ +..+ .+ ++.+.+.. +...
T Consensus 161 --p~~~---------------------~~~~--------------------~~---~~~~~~~~----~~~~-------- 182 (475)
T PRK06327 161 --PGVP---------------------FDNK--------------------II---LDNTGALN----FTEV-------- 182 (475)
T ss_pred --CCCC---------------------CCCc--------------------eE---ECcHHHhc----cccc--------
Confidence 3310 0000 01 11111110 0011
Q ss_pred cCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCC
Q psy8791 220 FPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANK 297 (706)
Q Consensus 220 ~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~ 297 (706)
+...+.++|+.. +......+++.|. +|+++++.+.+++ ++++.+.+.+.|+++||+++++++|.+++.+++
T Consensus 183 -~~~vvVvGgG~~--g~E~A~~l~~~g~----~Vtli~~~~~~l~~~d~~~~~~~~~~l~~~gi~i~~~~~v~~i~~~~~ 255 (475)
T PRK06327 183 -PKKLAVIGAGVI--GLELGSVWRRLGA----EVTILEALPAFLAAADEQVAKEAAKAFTKQGLDIHLGVKIGEIKTGGK 255 (475)
T ss_pred -CCeEEEECCCHH--HHHHHHHHHHcCC----eEEEEeCCCccCCcCCHHHHHHHHHHHHHcCcEEEeCcEEEEEEEcCC
Confidence 111222344432 2222345666664 4999999988876 678889999999999999999999999987655
Q ss_pred EEEEEeCC-Cc--eEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHH
Q psy8791 298 EAVFKSED-KT--ERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAA 370 (706)
Q Consensus 298 ~v~~~~~~-~g--~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~ 370 (706)
.+.+...+ +| +++++|.+++++|.+|+.. ++..++ .+++|++.||+ +++ |+.|+|||+|||+.. ++++.
T Consensus 256 ~v~v~~~~~~g~~~~i~~D~vl~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~-~~~-Ts~~~VyA~GD~~~~--~~~~~ 331 (475)
T PRK06327 256 GVSVAYTDADGEAQTLEVDKLIVSIGRVPNTDGLGLEAVGLKLDERGFIPVDD-HCR-TNVPNVYAIGDVVRG--PMLAH 331 (475)
T ss_pred EEEEEEEeCCCceeEEEcCEEEEccCCccCCCCCCcHhhCceeCCCCeEeECC-CCc-cCCCCEEEEEeccCC--cchHH
Confidence 44433221 23 5799999999999999953 345677 67889999999 677 899999999999975 45888
Q ss_pred HHHHhHHHHHHHHH
Q psy8791 371 AVAGQCKVVYDNLS 384 (706)
Q Consensus 371 ~a~~qg~~~a~ni~ 384 (706)
.|..||..+|+||.
T Consensus 332 ~A~~~G~~aa~~i~ 345 (475)
T PRK06327 332 KAEEEGVAVAERIA 345 (475)
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999999994
No 48
>PRK09853 putative selenate reductase subunit YgfK; Provisional
Probab=99.93 E-value=6.7e-24 Score=243.03 Aligned_cols=311 Identities=16% Similarity=0.135 Sum_probs=188.0
Q ss_pred Cccccccccccccccccc---cC-CCCCCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccC
Q psy8791 3 SLKLCPLKSYNLLSSSFS---TS-PLSSSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGG 78 (706)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~ 78 (706)
.+.|..++.+......-. .. .+......++|+|||||+|||+||.+|+++ |++|+|||+.+....... ..++.
T Consensus 508 pV~I~~Lkr~a~d~~~~~~~~~~~~~~~~~tgKkVaIIGgGPAGLsAA~~Lar~--G~~VtV~Ek~~~~GG~lr-~~IP~ 584 (1019)
T PRK09853 508 AVNIRELKKVALEKGWDEYKQRWHKPAGIGSRKKVAVIGAGPAGLAAAYFLARA--GHPVTVFEREENAGGVVK-NIIPQ 584 (1019)
T ss_pred CeeccHHHHHHHhhHHHhcccccCCCCccCCCCcEEEECCCHHHHHHHHHHHHc--CCeEEEEecccccCccee-eeccc
Confidence 466777776654332111 11 111124567999999999999999999999 899999999886432211 11221
Q ss_pred ccccCcccccccccccCCCcEEEEceeEEEEcCCCEEEeCCCeEEEecEEEEcccccc-ccCCCCCCccccccccccccc
Q psy8791 79 GMKKLSDSRRPMKSVLPSGATWVKDKIVSFDPENNRVRTQAGSEISYEYMIVASGIQM-YYDRVKGPSALINALGHCDLV 157 (706)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~i~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~-~~~~~~g~~~~~~~~~~~~~~ 157 (706)
.....+.+....+.+...++++..+....+ .+++.....||+||||||+.. ..+++||.+ +
T Consensus 585 ~Rlp~evL~~die~l~~~GVe~~~gt~Vdi-------~le~L~~~gYDaVILATGA~~~~~l~IpG~~--~--------- 646 (1019)
T PRK09853 585 FRIPAELIQHDIEFVKAHGVKFEFGCSPDL-------TVEQLKNEGYDYVVVAIGADKNGGLKLEGGN--Q--------- 646 (1019)
T ss_pred ccccHHHHHHHHHHHHHcCCEEEeCceeEE-------EhhhheeccCCEEEECcCCCCCCCCCCCCcc--C---------
Confidence 111222233334445557888887654333 233334567999999999974 445567611 0
Q ss_pred ccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHH
Q psy8791 158 RSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLI 237 (706)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~ 237 (706)
.+.. ..+......+.......++. .++++|+. -...+
T Consensus 647 ---------------------------------gV~s--aldfL~~~k~~~~~~~~GKr-------VVVIGGGn-VAmD~ 683 (1019)
T PRK09853 647 ---------------------------------NVIK--ALPFLEEYKNKGTALKLGKH-------VVVVGGGN-TAMDA 683 (1019)
T ss_pred ---------------------------------Ccee--hHHHHHHHhhhcccccCCCE-------EEEECCCh-HHHHH
Confidence 0000 00000000000001111222 22334432 22333
Q ss_pred HHHHHHHcCCCCCcEEEEEeCCCc-CCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEE---------------
Q psy8791 238 GDEYLRKHKKRDAAKLTYCTGMGV-LFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVF--------------- 301 (706)
Q Consensus 238 ~~~~l~~~g~~~~~~v~l~~~~~~-~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~--------------- 301 (706)
+. .+.+.+. ..+|+++.+... .++ ...+.+.+.+ +.||+++.+..+.++..++. +..
T Consensus 684 Ar-~a~RlgG--akeVTLVyRr~~~~MP--A~~eEle~Al-eeGVe~~~~~~p~~I~~dG~-l~~~~~~lg~~d~~Gr~~ 756 (1019)
T PRK09853 684 AR-AALRVPG--VEKVTVVYRRTKQEMP--AWREEYEEAL-EDGVEFKELLNPESFDADGT-LTCRVMKLGEPDESGRRR 756 (1019)
T ss_pred HH-HHHhcCC--CceEEEEEccCccccc--ccHHHHHHHH-HcCCEEEeCCceEEEEcCCc-EEEEEEEeecccCCCceE
Confidence 33 2333321 125888887653 333 3344455544 47999999988888864332 211
Q ss_pred -EeCCCceEEeecEEEECCCCCch-hhhhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHH
Q psy8791 302 -KSEDKTERLPYAIMHVTPPMGPV-PELATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKV 378 (706)
Q Consensus 302 -~~~~~g~~i~~D~vI~a~G~~~~-~~~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~ 378 (706)
+.++++.++++|+||+|+|..|+ .++...|+ .+++|++.||+ +++ |+.|+|||+|||+.. |.+...|+.||+.
T Consensus 757 ~v~tg~~~~I~aD~VIvAIG~~Pntelle~~GL~ld~~G~I~VDe-tlq-Ts~pgVFAaGD~a~G--p~tvv~Ai~qGr~ 832 (1019)
T PRK09853 757 PVETGETVTLEADTVITAIGEQVDTELLKANGIPLDKKGWPVVDA-NGE-TSLTNVYMIGDVQRG--PSTIVAAIADARR 832 (1019)
T ss_pred EeeCCCeEEEEeCEEEECCCCcCChhHHHhcCccccCCCCEEeCC-Ccc-cCCCCEEEEeccccC--chHHHHHHHHHHH
Confidence 12335578999999999999999 55666787 67889999998 788 799999999999876 4588899999999
Q ss_pred HHHHHHHHHc
Q psy8791 379 VYDNLSAVMK 388 (706)
Q Consensus 379 ~a~ni~~~l~ 388 (706)
+|+||...+.
T Consensus 833 AA~nI~~~~~ 842 (1019)
T PRK09853 833 AADAILSREG 842 (1019)
T ss_pred HHHHHhhhcC
Confidence 9999986544
No 49
>COG0492 TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=6.6e-24 Score=216.50 Aligned_cols=288 Identities=21% Similarity=0.245 Sum_probs=194.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCe-EEEEcCCCCc---ccCc---ccccccCccccCcccccccccccCCCcEEE
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQ-VSIVEPTDDH---YYQP---MFTLIGGGMKKLSDSRRPMKSVLPSGATWV 101 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~-Vtlie~~~~~---~~~p---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i 101 (706)
..+||+|||||||||+||.+++|. +.+ ++|+|+.... ...+ .+|.+.++...++......++....+++++
T Consensus 2 ~~~DviIIG~GPAGl~AAiya~r~--~l~~~li~~~~~~gg~~~~~~~venypg~~~~~~g~~L~~~~~~~a~~~~~~~~ 79 (305)
T COG0492 2 KIYDVIIIGGGPAGLTAAIYAARA--GLKVVLILEGGEPGGQLTKTTDVENYPGFPGGILGPELMEQMKEQAEKFGVEIV 79 (305)
T ss_pred ceeeEEEECCCHHHHHHHHHHHHc--CCCcEEEEecCCcCCccccceeecCCCCCccCCchHHHHHHHHHHHhhcCeEEE
Confidence 457999999999999999999999 778 6666665332 1111 122222222222222222233334788999
Q ss_pred EceeEEEEcCC--CEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCcc
Q psy8791 102 KDKIVSFDPEN--NRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPS 179 (706)
Q Consensus 102 ~~~v~~id~~~--~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (706)
..+|..++... ..|.++++. ++.++||||||...+.+.+||
T Consensus 80 ~~~v~~v~~~~~~F~v~t~~~~-~~ak~vIiAtG~~~~~~~~~~------------------------------------ 122 (305)
T COG0492 80 EDEVEKVELEGGPFKVKTDKGT-YEAKAVIIATGAGARKLGVPG------------------------------------ 122 (305)
T ss_pred EEEEEEEeecCceEEEEECCCe-EEEeEEEECcCCcccCCCCCc------------------------------------
Confidence 99999999875 367777775 999999999999999988887
Q ss_pred chhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCC
Q psy8791 180 GLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGM 259 (706)
Q Consensus 180 ~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~ 259 (706)
..+.+. . .+..+-..+. . +.+.++ ++++|+.. +...+-+|.+.+. +|+++++.
T Consensus 123 -e~e~~g-~--gv~yc~~cdg-~--------~~~k~v--------~ViGgG~s--Ave~Al~L~~~a~----~Vtlv~r~ 175 (305)
T COG0492 123 -EEEFEG-K--GVSYCATCDG-F--------FKGKDV--------VVIGGGDS--AVEEALYLSKIAK----KVTLVHRR 175 (305)
T ss_pred -chhhcC-C--ceEEeeecCc-c--------ccCCeE--------EEEcCCHH--HHHHHHHHHHhcC----eEEEEecC
Confidence 111111 1 2222222211 0 112222 23444422 1222234555543 39999999
Q ss_pred CcCCCchhHHHHHHHHHHhC-CceEEcCCceEEEeCCC-CEEEEEeC-CCceEEeecEEEECCCCCch-hhhhcCCCCCC
Q psy8791 260 GVLFPSPFYAEKIHDILIGR-GVDVHKGKALVEIDLAN-KEAVFKSE-DKTERLPYAIMHVTPPMGPV-PELATSRLVDQ 335 (706)
Q Consensus 260 ~~~~~~~~~~~~~~~~l~~~-gV~v~~~~~v~~i~~~~-~~v~~~~~-~~g~~i~~D~vI~a~G~~~~-~~~~~~~l~~~ 335 (706)
+.+-. .+.+.+.++++ +|++++++.++++..++ ..+++... +..+++++|-++.++|..|+ .++...+.+++
T Consensus 176 ~~~ra----~~~~~~~l~~~~~i~~~~~~~i~ei~G~~v~~v~l~~~~~~~~~~~~~gvf~~iG~~p~~~~~~~~~~~~~ 251 (305)
T COG0492 176 DEFRA----EEILVERLKKNVKIEVLTNTVVKEILGDDVEGVVLKNVKGEEKELPVDGVFIAIGHLPNTELLKGLGVLDE 251 (305)
T ss_pred cccCc----CHHHHHHHHhcCCeEEEeCCceeEEecCccceEEEEecCCceEEEEeceEEEecCCCCchHHHhhccccCC
Confidence 88754 44556666665 89999999999999875 34666543 23457899999999999999 45555566899
Q ss_pred CCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcC
Q psy8791 336 SGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKN 389 (706)
Q Consensus 336 ~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g 389 (706)
+|+|.||+ .++ |+.|+|||+|||+..+.. +...|..+|..+|.++.+.+..
T Consensus 252 ~g~I~v~~-~~~-TsvpGifAaGDv~~~~~r-qi~ta~~~G~~Aa~~a~~~l~~ 302 (305)
T COG0492 252 NGYIVVDE-EME-TSVPGIFAAGDVADKNGR-QIATAAGDGAIAALSAERYLES 302 (305)
T ss_pred CCcEEcCC-Ccc-cCCCCEEEeEeeccCccc-EEeehhhhHHHHHHHHHHHhhh
Confidence 99999999 566 999999999999998643 5667888999999998887753
No 50
>TIGR03452 mycothione_red mycothione reductase. Mycothiol, a glutathione analog in Mycobacterium tuberculosis and related species, can form a disulfide-linked dimer called mycothione. This enzyme can reduce mycothione to regenerate two mycothiol molecules. The enzyme shows some sequence similarity to glutathione-disulfide reductase, trypanothione-disulfide reductase, and dihydrolipoamide dehydrogenase. The characterized protein from M. tuberculosis, a homodimer, has FAD as a cofactor, one per monomer, and uses NADPH as a substrate.
Probab=99.93 E-value=1.4e-23 Score=230.09 Aligned_cols=278 Identities=16% Similarity=0.214 Sum_probs=184.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC------cccc---------------c--ccCcc--ccCc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ------PMFT---------------L--IGGGM--KKLS 84 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~------p~~~---------------~--~~~~~--~~~~ 84 (706)
++|++|||||+||..||.. .. |.+|+|||++..-.-+ |.-. . +..+. .+..
T Consensus 2 ~yD~vvIG~G~~g~~aa~~--~~--g~~V~lie~~~~GGtC~n~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~d~~ 77 (452)
T TIGR03452 2 HYDLIIIGTGSGNSIPDPR--FA--DKRIAIVEKGTFGGTCLNVGCIPTKMFVYAAEVAQSIGESARLGIDAEIDSVRWP 77 (452)
T ss_pred CcCEEEECCCHHHHHHHHH--HC--CCeEEEEeCCCCCCeeeccCccchHHHHHHHHHHHHHHHhhccCeeCCCCccCHH
Confidence 4799999999999998644 34 8899999986531110 1100 0 00000 0000
Q ss_pred c------------cccc-ccccc---CCCcEEEEceeEEEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccc
Q psy8791 85 D------------SRRP-MKSVL---PSGATWVKDKIVSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALI 148 (706)
Q Consensus 85 ~------------~~~~-~~~~~---~~~v~~i~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~ 148 (706)
. +... ..... ..+++++.++..-. +.++|.+.+|+++.||+||||||+.+..|+.++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~--~~~~V~~~~g~~~~~d~lIiATGs~p~~p~~~~~~--- 152 (452)
T TIGR03452 78 DIVSRVFGDRIDPIAAGGEDYRRGDETPNIDVYDGHARFV--GPRTLRTGDGEEITGDQIVIAAGSRPYIPPAIADS--- 152 (452)
T ss_pred HHHHHhhhhHhHHHhccchHhhhhcccCCeEEEEEEEEEe--cCCEEEECCCcEEEeCEEEEEECCCCCCCCCCCCC---
Confidence 0 0000 11111 15899998876555 46778888888899999999999998766533300
Q ss_pred cccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeC
Q psy8791 149 NALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCG 228 (706)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~ 228 (706)
.+ ..++.+.+..+ .... ...+.++
T Consensus 153 ------------------------------------------~~-~~~~~~~~~~l----~~~~---------k~vvVIG 176 (452)
T TIGR03452 153 ------------------------------------------GV-RYHTNEDIMRL----PELP---------ESLVIVG 176 (452)
T ss_pred ------------------------------------------CC-EEEcHHHHHhh----hhcC---------CcEEEEC
Confidence 00 01122222221 1111 1222334
Q ss_pred ChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCC
Q psy8791 229 GAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDK 306 (706)
Q Consensus 229 g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~ 306 (706)
|++. +......+.+.|. +|+++++.+.+++ ++++.+.+.+.+ +.||++++++.|.+++.+++.+.+. ..+
T Consensus 177 gG~i--g~E~A~~l~~~G~----~Vtli~~~~~ll~~~d~~~~~~l~~~~-~~gI~i~~~~~V~~i~~~~~~v~v~-~~~ 248 (452)
T TIGR03452 177 GGYI--AAEFAHVFSALGT----RVTIVNRSTKLLRHLDEDISDRFTEIA-KKKWDIRLGRNVTAVEQDGDGVTLT-LDD 248 (452)
T ss_pred CCHH--HHHHHHHHHhCCC----cEEEEEccCccccccCHHHHHHHHHHH-hcCCEEEeCCEEEEEEEcCCeEEEE-EcC
Confidence 4422 2333345666664 4999999988765 677777777655 4689999999999998655545443 346
Q ss_pred ceEEeecEEEECCCCCchhhh---hcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHH
Q psy8791 307 TERLPYAIMHVTPPMGPVPEL---ATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDN 382 (706)
Q Consensus 307 g~~i~~D~vI~a~G~~~~~~~---~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~n 382 (706)
|+++++|.+++++|.+|+..+ .+.|+ .+++|++.||+ ++| |+.|+|||+|||+.. +++++.|.+||+++|+|
T Consensus 249 g~~i~~D~vl~a~G~~pn~~~l~~~~~gl~~~~~G~i~vd~-~~~-Ts~~~IyA~GD~~~~--~~l~~~A~~~g~~~a~n 324 (452)
T TIGR03452 249 GSTVTADVLLVATGRVPNGDLLDAEAAGVEVDEDGRIKVDE-YGR-TSARGVWALGDVSSP--YQLKHVANAEARVVKHN 324 (452)
T ss_pred CCEEEcCEEEEeeccCcCCCCcCchhcCeeECCCCcEeeCC-Ccc-cCCCCEEEeecccCc--ccChhHHHHHHHHHHHH
Confidence 778999999999999999653 34577 67889999999 688 999999999999985 35788899999999999
Q ss_pred HH
Q psy8791 383 LS 384 (706)
Q Consensus 383 i~ 384 (706)
|.
T Consensus 325 i~ 326 (452)
T TIGR03452 325 LL 326 (452)
T ss_pred hc
Confidence 95
No 51
>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional
Probab=99.93 E-value=5.1e-24 Score=234.38 Aligned_cols=287 Identities=20% Similarity=0.223 Sum_probs=181.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCccc-ccccccccCCCcEEEEceeE
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDS-RRPMKSVLPSGATWVKDKIV 106 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~i~~~v~ 106 (706)
...++|+|||||+|||++|..|+++ +++|+|||+++.......+ .++. ......+ ......+...++++..+...
T Consensus 138 ~~~~~VvIIGgGpaGl~aA~~l~~~--g~~V~lie~~~~~gG~l~~-gip~-~~~~~~~~~~~~~~l~~~gv~~~~~~~v 213 (457)
T PRK11749 138 KTGKKVAVIGAGPAGLTAAHRLARK--GYDVTIFEARDKAGGLLRY-GIPE-FRLPKDIVDREVERLLKLGVEIRTNTEV 213 (457)
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhC--CCeEEEEccCCCCCcEeec-cCCC-ccCCHHHHHHHHHHHHHcCCEEEeCCEE
Confidence 4567999999999999999999998 8999999999863211000 0111 1111122 12223334468888776553
Q ss_pred EEEcCCCEEEeCCCeEEEecEEEEccccc-cccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhh
Q psy8791 107 SFDPENNRVRTQAGSEISYEYMIVASGIQ-MYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEAL 185 (706)
Q Consensus 107 ~id~~~~~v~~~~g~~~~yd~lviAtG~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 185 (706)
. +.+.+++. .+.||+||+|||+. +..+.+||.+ ..
T Consensus 214 ~-----~~v~~~~~-~~~~d~vvlAtGa~~~~~~~i~G~~----~~---------------------------------- 249 (457)
T PRK11749 214 G-----RDITLDEL-RAGYDAVFIGTGAGLPRFLGIPGEN----LG---------------------------------- 249 (457)
T ss_pred C-----CccCHHHH-HhhCCEEEEccCCCCCCCCCCCCcc----CC----------------------------------
Confidence 1 22333333 37899999999985 6667788821 00
Q ss_pred cCCCCCcccCCChhHHHHHHHHHH------hccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCC
Q psy8791 186 DQPDSGVSTNYSPQYVEKTLRNLQ------HFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGM 259 (706)
Q Consensus 186 ~~~~~~v~~~~~~~~~~~~~~~l~------~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~ 259 (706)
.+. +.. ....... ....+ ...++++|+.. +......+.+.|.. +|+++++.
T Consensus 250 -----gv~---~~~---~~l~~~~~~~~~~~~~~g-------~~VvViGgG~~--g~e~A~~l~~~G~~---~Vtlv~~~ 306 (457)
T PRK11749 250 -----GVY---SAV---DFLTRVNQAVADYDLPVG-------KRVVVIGGGNT--AMDAARTAKRLGAE---SVTIVYRR 306 (457)
T ss_pred -----CcE---EHH---HHHHHHhhccccccCCCC-------CeEEEECCCHH--HHHHHHHHHHcCCC---eEEEeeec
Confidence 000 000 0111111 11111 22233444422 22233345555532 48888875
Q ss_pred Cc-CCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCE---EEEEe----------------CCCceEEeecEEEECC
Q psy8791 260 GV-LFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKE---AVFKS----------------EDKTERLPYAIMHVTP 319 (706)
Q Consensus 260 ~~-~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~---v~~~~----------------~~~g~~i~~D~vI~a~ 319 (706)
.. .++. .....+.+++.||++++++.+.++..+++. +.+.. .++++++++|+||+++
T Consensus 307 ~~~~~~~---~~~~~~~~~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~g~~~~~~~g~~~~i~~D~vi~a~ 383 (457)
T PRK11749 307 GREEMPA---SEEEVEHAKEEGVEFEWLAAPVEILGDEGRVTGVEFVRMELGEPDASGRRRVPIEGSEFTLPADLVIKAI 383 (457)
T ss_pred CcccCCC---CHHHHHHHHHCCCEEEecCCcEEEEecCCceEEEEEEEEEecCcCCCCCcccCCCCceEEEECCEEEECc
Confidence 43 3331 122356778899999999999999765532 44322 1244679999999999
Q ss_pred CCCchhhhh--cCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCCC
Q psy8791 320 PMGPVPELA--TSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNRA 391 (706)
Q Consensus 320 G~~~~~~~~--~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~~ 391 (706)
|++|+..+. ..++ .+++|++.||+. .+.|+.|+|||+|||+.. ++++..|+.||+.+|.+|.+.+.|+.
T Consensus 384 G~~p~~~l~~~~~gl~~~~~g~i~vd~~-~~~Ts~~~VfA~GD~~~~--~~~~~~A~~~G~~aA~~I~~~l~g~~ 455 (457)
T PRK11749 384 GQTPNPLILSTTPGLELNRWGTIIADDE-TGRTSLPGVFAGGDIVTG--AATVVWAVGDGKDAAEAIHEYLEGAA 455 (457)
T ss_pred cCCCCchhhccccCccCCCCCCEEeCCC-CCccCCCCEEEeCCcCCC--chHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999996543 2456 678899999983 344899999999999964 45888999999999999999998864
No 52
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=99.92 E-value=2.9e-24 Score=239.14 Aligned_cols=287 Identities=17% Similarity=0.151 Sum_probs=186.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCc----ccccccCcc-ccCcccccccccc-cCCCcEEE
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQP----MFTLIGGGM-KKLSDSRRPMKSV-LPSGATWV 101 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p----~~~~~~~~~-~~~~~~~~~~~~~-~~~~v~~i 101 (706)
...+||+|||||+||++||.+|++. |++|+||++.- ..++ .++.+.+.. .....+...+.+. ...++++.
T Consensus 210 ~~~~dVvIIGgGpAGl~AA~~la~~--G~~v~li~~~~--GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~gv~i~ 285 (515)
T TIGR03140 210 LDPYDVLVVGGGPAGAAAAIYAARK--GLRTAMVAERI--GGQVKDTVGIENLISVPYTTGSQLAANLEEHIKQYPIDLM 285 (515)
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHC--CCcEEEEecCC--CCccccCcCcccccccCCCCHHHHHHHHHHHHHHhCCeEE
Confidence 4568999999999999999999998 99999997531 1111 111111100 1111122222222 23678887
Q ss_pred E-ceeEEEEcCCC--EEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCc
Q psy8791 102 K-DKIVSFDPENN--RVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRP 178 (706)
Q Consensus 102 ~-~~v~~id~~~~--~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (706)
. .+|++++.+.+ .+.+++|..+.||++|+|||+.+..+++||.+ ++ ..+
T Consensus 286 ~~~~V~~I~~~~~~~~v~~~~g~~i~~d~lIlAtGa~~~~~~ipG~~--~~------------------~~~-------- 337 (515)
T TIGR03140 286 ENQRAKKIETEDGLIVVTLESGEVLKAKSVIVATGARWRKLGVPGEK--EY------------------IGK-------- 337 (515)
T ss_pred cCCEEEEEEecCCeEEEEECCCCEEEeCEEEECCCCCcCCCCCCCHH--Hc------------------CCC--------
Confidence 6 68898987654 56667787899999999999998888888821 00 000
Q ss_pred cchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeC
Q psy8791 179 SGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTG 258 (706)
Q Consensus 179 ~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~ 258 (706)
.+......+. . ...+.++ +.++|+.. +...+..+...+. +|++++.
T Consensus 338 ------------~v~~~~~~~~------~--~~~~k~V--------vViGgG~~--g~E~A~~L~~~g~----~Vtli~~ 383 (515)
T TIGR03140 338 ------------GVAYCPHCDG------P--FFKGKDV--------AVIGGGNS--GIEAAIDLAGIVR----HVTVLEF 383 (515)
T ss_pred ------------eEEEeeccCh------h--hcCCCEE--------EEECCcHH--HHHHHHHHHhcCc----EEEEEEe
Confidence 0110000000 0 0111122 22344432 2222234454443 5999988
Q ss_pred CCcCCCchhHHHHHHHHHHh-CCceEEcCCceEEEeCCCCEE---EEEeCC--CceEEeecEEEECCCCCchh-hhhcCC
Q psy8791 259 MGVLFPSPFYAEKIHDILIG-RGVDVHKGKALVEIDLANKEA---VFKSED--KTERLPYAIMHVTPPMGPVP-ELATSR 331 (706)
Q Consensus 259 ~~~~~~~~~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~~v---~~~~~~--~g~~i~~D~vI~a~G~~~~~-~~~~~~ 331 (706)
.+.+.. ...+.+.|++ .||++++++.+.++..+++.+ .+...+ +++++++|.|++++|.+|++ ++...
T Consensus 384 ~~~l~~----~~~l~~~l~~~~gV~i~~~~~v~~i~~~~~~v~~v~~~~~~~~~~~~i~~D~vi~a~G~~Pn~~~l~~~- 458 (515)
T TIGR03140 384 ADELKA----DKVLQDKLKSLPNVDILTSAQTTEIVGDGDKVTGIRYQDRNSGEEKQLDLDGVFVQIGLVPNTEWLKDA- 458 (515)
T ss_pred CCcCCh----hHHHHHHHhcCCCCEEEECCeeEEEEcCCCEEEEEEEEECCCCcEEEEEcCEEEEEeCCcCCchHHhhh-
Confidence 776642 3456677776 699999999999998764443 333221 23579999999999999995 44444
Q ss_pred C-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHc
Q psy8791 332 L-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMK 388 (706)
Q Consensus 332 l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~ 388 (706)
+ .+++|+|.||+ ++| |+.|||||+|||+..+. ++...|+.+|..+|.+|..++.
T Consensus 459 ~~~~~~G~I~vd~-~~~-Ts~p~IyAaGDv~~~~~-~~~~~A~~~G~~Aa~~i~~~~~ 513 (515)
T TIGR03140 459 VELNRRGEIVIDE-RGR-TSVPGIFAAGDVTTVPY-KQIIIAMGEGAKAALSAFDYLI 513 (515)
T ss_pred cccCCCCeEEECC-CCC-CCCCCEEEcccccCCcc-ceEEEEEccHHHHHHHHHHHHh
Confidence 5 56789999999 788 89999999999998753 3445789999999999987763
No 53
>PTZ00052 thioredoxin reductase; Provisional
Probab=99.92 E-value=1.5e-23 Score=231.96 Aligned_cols=279 Identities=14% Similarity=0.146 Sum_probs=183.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC----C----cccC-------ccccc--c------------cCcc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD----D----HYYQ-------PMFTL--I------------GGGM 80 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~----~----~~~~-------p~~~~--~------------~~~~ 80 (706)
.+||+|||||+||++||.+|+++ |.+|+|||+++ . +..+ |.-.. . ..+.
T Consensus 5 ~yDviVIG~GpaG~~AA~~aa~~--G~~V~lie~~~~~~~~~~~~~GG~C~n~gciPsK~l~~~a~~~~~~~~~~~~~g~ 82 (499)
T PTZ00052 5 MYDLVVIGGGSGGMAAAKEAAAH--GKKVALFDYVKPSTQGTKWGLGGTCVNVGCVPKKLMHYAANIGSIFHHDSQMYGW 82 (499)
T ss_pred ccCEEEECCCHHHHHHHHHHHhC--CCeEEEEeccCCCCccccccccceeccccccchHHHHHHHHHHHHHHhHHhcCCC
Confidence 57999999999999999999999 89999999732 1 1111 11000 0 0000
Q ss_pred -----ccCccccc-----------cccccc-CCCcEEEEceeEEEEcCCCEEEeCC---CeEEEecEEEEccccccccCC
Q psy8791 81 -----KKLSDSRR-----------PMKSVL-PSGATWVKDKIVSFDPENNRVRTQA---GSEISYEYMIVASGIQMYYDR 140 (706)
Q Consensus 81 -----~~~~~~~~-----------~~~~~~-~~~v~~i~~~v~~id~~~~~v~~~~---g~~~~yd~lviAtG~~~~~~~ 140 (706)
.+...+.. .+.... ..+++++++++...+ .++|.+.+ +..+.||+||||||+.+..|.
T Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~i~g~a~~~~--~~~v~v~~~~~~~~i~~d~lIIATGs~p~~p~ 160 (499)
T PTZ00052 83 KTSSSFNWGKLVTTVQNHIRSLNFSYRTGLRSSKVEYINGLAKLKD--EHTVSYGDNSQEETITAKYILIATGGRPSIPE 160 (499)
T ss_pred CCCCCcCHHHHHHHHHHHHHHhhHHHHHHhhhcCcEEEEEEEEEcc--CCEEEEeeCCCceEEECCEEEEecCCCCCCCC
Confidence 00011100 011111 157888888877654 45566532 357999999999999998774
Q ss_pred -CCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEe
Q psy8791 141 -VKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYT 219 (706)
Q Consensus 141 -~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~ 219 (706)
+||.+ ++ ..+.+.+.. +....
T Consensus 161 ~i~G~~--~~---------------------------------------------~~~~~~~~~----~~~~~------- 182 (499)
T PTZ00052 161 DVPGAK--EY---------------------------------------------SITSDDIFS----LSKDP------- 182 (499)
T ss_pred CCCCcc--ce---------------------------------------------eecHHHHhh----hhcCC-------
Confidence 88821 00 001111111 11111
Q ss_pred cCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCC
Q psy8791 220 FPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANK 297 (706)
Q Consensus 220 ~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~ 297 (706)
...+.++|+. ++......+.+.|. +|+++++. .+++ ++++.+.+++.|+++||++++++.+.+++..++
T Consensus 183 --~~vvIIGgG~--iG~E~A~~l~~~G~----~Vtli~~~-~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~~~ 253 (499)
T PTZ00052 183 --GKTLIVGASY--IGLETAGFLNELGF----DVTVAVRS-IPLRGFDRQCSEKVVEYMKEQGTLFLEGVVPINIEKMDD 253 (499)
T ss_pred --CeEEEECCCH--HHHHHHHHHHHcCC----cEEEEEcC-cccccCCHHHHHHHHHHHHHcCCEEEcCCeEEEEEEcCC
Confidence 1112234442 22333445666764 38888864 4554 678889999999999999999999988876443
Q ss_pred EEEEEeCCCceEEeecEEEECCCCCchhhh---hcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHH
Q psy8791 298 EAVFKSEDKTERLPYAIMHVTPPMGPVPEL---ATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVA 373 (706)
Q Consensus 298 ~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~---~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~ 373 (706)
.+.+. ..+|+++++|.|++++|.+||..+ ...++ .+++|++.+++ . + |+.|+|||+|||+.. .+.++..|.
T Consensus 254 ~~~v~-~~~g~~i~~D~vl~a~G~~pn~~~l~l~~~g~~~~~~G~ii~~~-~-~-Ts~p~IyAiGDv~~~-~~~l~~~A~ 328 (499)
T PTZ00052 254 KIKVL-FSDGTTELFDTVLYATGRKPDIKGLNLNAIGVHVNKSNKIIAPN-D-C-TNIPNIFAVGDVVEG-RPELTPVAI 328 (499)
T ss_pred eEEEE-ECCCCEEEcCEEEEeeCCCCCccccCchhcCcEECCCCCEeeCC-C-c-CCCCCEEEEEEecCC-CcccHHHHH
Confidence 33332 336788999999999999999543 45667 67789888887 4 5 899999999999963 245888999
Q ss_pred HhHHHHHHHHH
Q psy8791 374 GQCKVVYDNLS 384 (706)
Q Consensus 374 ~qg~~~a~ni~ 384 (706)
+||+.+|+||.
T Consensus 329 ~~g~~aa~ni~ 339 (499)
T PTZ00052 329 KAGILLARRLF 339 (499)
T ss_pred HHHHHHHHHHh
Confidence 99999999995
No 54
>PRK12770 putative glutamate synthase subunit beta; Provisional
Probab=99.92 E-value=1.2e-23 Score=223.76 Aligned_cols=302 Identities=15% Similarity=0.120 Sum_probs=180.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCcccccccccccCCCcEEEEceeEEE
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 108 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~v~~i 108 (706)
..++|+|||||++|+++|..|++. +++|++||+.+........ .........+.+.....++.+.++++..++...+
T Consensus 17 ~~~~VvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~v~~ 93 (352)
T PRK12770 17 TGKKVAIIGAGPAGLAAAGYLACL--GYEVHVYDKLPEPGGLMLF-GIPEFRIPIERVREGVKELEEAGVVFHTRTKVCC 93 (352)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCCCCCceeee-cCcccccCHHHHHHHHHHHHhCCeEEecCcEEee
Confidence 457999999999999999999998 8999999998864321110 0111111122222334455556888877644432
Q ss_pred EcC-----C-----CEEEeCCCeEEEecEEEEcccc-ccccCCCCCCcccccccccccccccccccCccCCccccccccC
Q psy8791 109 DPE-----N-----NRVRTQAGSEISYEYMIVASGI-QMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRR 177 (706)
Q Consensus 109 d~~-----~-----~~v~~~~g~~~~yd~lviAtG~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (706)
+.. . +.+..+ +..+.||+||+|||+ .+..|++||.+ . +..+... .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~-~~~~~~d~lviAtGs~~~~~~~ipg~~----~-------------~~v~~~~-----~- 149 (352)
T PRK12770 94 GEPLHEEEGDEFVERIVSLE-ELVKKYDAVLIATGTWKSRKLGIPGED----L-------------PGVYSAL-----E- 149 (352)
T ss_pred ccccccccccccccccCCHH-HHHhhCCEEEEEeCCCCCCcCCCCCcc----c-------------cCceeHH-----H-
Confidence 211 1 111111 124789999999999 46778888831 0 0000000 0
Q ss_pred ccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEe
Q psy8791 178 PSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCT 257 (706)
Q Consensus 178 ~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~ 257 (706)
+...+... + ..... .+.+....+.++ +.++++ ..... .+..+.+.|.+ +|++++
T Consensus 150 ---~~~~~~~~----~--~~~~~----~~~~~~~~g~~v--------vViG~G-~~g~e-~A~~l~~~g~~---~Vtvi~ 203 (352)
T PRK12770 150 ---YLFRIRAA----K--LGYLP----WEKVPPVEGKKV--------VVVGAG-LTAVD-AALEAVLLGAE---KVYLAY 203 (352)
T ss_pred ---HHHHhhhc----c--ccccc----cccccccCCCEE--------EEECCC-HHHHH-HHHHHHHcCCC---eEEEEe
Confidence 00000000 0 00000 000000111122 222333 22222 33344555533 488887
Q ss_pred CCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCE--EEEEe-----------------CCCceEEeecEEEEC
Q psy8791 258 GMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKE--AVFKS-----------------EDKTERLPYAIMHVT 318 (706)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~--v~~~~-----------------~~~g~~i~~D~vI~a 318 (706)
+.+.... + ......+.|+++||++++++.+.+++.+++. +.+.. ..+++++++|.+|++
T Consensus 204 ~~~~~~~-~-~~~~~~~~l~~~gi~i~~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~vi~a 281 (352)
T PRK12770 204 RRTINEA-P-AGKYEIERLIARGVEFLELVTPVRIIGEGRVEGVELAKMRLGEPDESGRPRPVPIPGSEFVLEADTVVFA 281 (352)
T ss_pred ecchhhC-C-CCHHHHHHHHHcCCEEeeccCceeeecCCcEeEEEEEEEEecCcCcccCcCceecCCCeEEEECCEEEEC
Confidence 6543221 1 2244556799999999999999999865432 22211 124468999999999
Q ss_pred CCCCchhhhhc--CCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcC
Q psy8791 319 PPMGPVPELAT--SRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKN 389 (706)
Q Consensus 319 ~G~~~~~~~~~--~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g 389 (706)
+|.+|++.+.. .++ .+++|++.||+ +++ ++.|+|||+|||+..+ .....|+.||+.+|.+|.+.|..
T Consensus 282 ~G~~p~~~l~~~~~g~~~~~~g~i~vd~-~~~-t~~~~vyaiGD~~~~~--~~~~~A~~~g~~aa~~i~~~l~~ 351 (352)
T PRK12770 282 IGEIPTPPFAKECLGIELNRKGEIVVDE-KHM-TSREGVFAAGDVVTGP--SKIGKAIKSGLRAAQSIHEWLDL 351 (352)
T ss_pred cccCCCchhhhcccCceecCCCcEeeCC-Ccc-cCCCCEEEEcccccCc--chHHHHHHHHHHHHHHHHHHHhc
Confidence 99999965544 566 67789999999 677 7899999999999863 47789999999999999998865
No 55
>TIGR03315 Se_ygfK putative selenate reductase, YgfK subunit. Members of this protein family are YgfK, predicted to be one subunit of a three-subunit, molybdopterin-containing selenate reductase. This enzyme is found, typically, in genomic regions associated with xanthine dehydrogenase homologs predicted to belong to the selenium-dependent molybdenum hydroxylases (SDMH). Therefore, the selenate reductase is suggested to play a role in furnishing selenide for SelD, the selenophosphate synthase.
Probab=99.92 E-value=1.1e-23 Score=242.61 Aligned_cols=310 Identities=18% Similarity=0.165 Sum_probs=184.1
Q ss_pred Cccccccccccccccccc---cCC-CCCCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccC
Q psy8791 3 SLKLCPLKSYNLLSSSFS---TSP-LSSSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGG 78 (706)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~ 78 (706)
.+.|..++.++....+-. ... +......++|+|||||+|||+||++|+++ |++|||||+++....... ..++.
T Consensus 506 pV~I~~Lkr~a~d~~~~~~~~~~~~~~~~~~~kkVaIIGGGPAGLSAA~~LAr~--G~~VTV~Ek~~~lGG~l~-~~IP~ 582 (1012)
T TIGR03315 506 SVNIREMKKVAAEKGYDEYKTRWHKPQGKSSAHKVAVIGAGPAGLSAGYFLARA--GHPVTVFEKKEKPGGVVK-NIIPE 582 (1012)
T ss_pred CCcccHHHHHHHhhHHHhcCccCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHC--CCeEEEEecccccCceee-ecccc
Confidence 467777777765432111 111 11223457999999999999999999998 899999999886432211 11222
Q ss_pred ccccCcccccccccccCCCcEEEEceeEEEEcCCCEEEeCCCeEEEecEEEEcccccc-ccCCCCCCccccccccccccc
Q psy8791 79 GMKKLSDSRRPMKSVLPSGATWVKDKIVSFDPENNRVRTQAGSEISYEYMIVASGIQM-YYDRVKGPSALINALGHCDLV 157 (706)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~i~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~-~~~~~~g~~~~~~~~~~~~~~ 157 (706)
.....+.+......+...+++++.+.... +.+.+.....||+||+|||+.. ..+.++|.+ +
T Consensus 583 ~rlp~e~l~~~ie~l~~~GVe~~~g~~~d-------~~ve~l~~~gYDaVIIATGA~~~~~l~I~G~~--~--------- 644 (1012)
T TIGR03315 583 FRISAESIQKDIELVKFHGVEFKYGCSPD-------LTVAELKNQGYKYVILAIGAWKHGPLRLEGGG--E--------- 644 (1012)
T ss_pred cCCCHHHHHHHHHHHHhcCcEEEEecccc-------eEhhhhhcccccEEEECCCCCCCCCCCcCCCC--c---------
Confidence 11222223333444555788887653111 2233334567999999999874 344566610 0
Q ss_pred ccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHH
Q psy8791 158 RSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLI 237 (706)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~ 237 (706)
.+. + . .. .+..+..+...+..+...++++|+. -....
T Consensus 645 ---------------------------------~v~---~--a-ve---fL~~~~~~~~~~~~GK~VVVIGGGn-vAmD~ 681 (1012)
T TIGR03315 645 ---------------------------------RVL---K--S-LE---FLRAFKEGPTINPLGKHVVVVGGGN-TAMDA 681 (1012)
T ss_pred ---------------------------------cee---e--H-HH---HHHHhhccccccccCCeEEEECCCH-HHHHH
Confidence 000 0 0 00 1111111100011122223344442 22233
Q ss_pred HHHHHHHcCCCCCcEEEEEeCCCc-CCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEE--------------
Q psy8791 238 GDEYLRKHKKRDAAKLTYCTGMGV-LFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFK-------------- 302 (706)
Q Consensus 238 ~~~~l~~~g~~~~~~v~l~~~~~~-~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~-------------- 302 (706)
+....+..|. .+|+++.+... .++ ...+.+++.+ +.||+++.+..+.+++. +.+++.
T Consensus 682 Ar~a~Rl~Ga---~kVtLVyRr~~~~Mp--a~~eEl~~al-eeGVe~~~~~~p~~I~~--g~l~v~~~~l~~~d~sGr~~ 753 (1012)
T TIGR03315 682 ARAALRVPGV---EKVTVVYRRTKRYMP--ASREELEEAL-EDGVDFKELLSPESFED--GTLTCEVMKLGEPDASGRRR 753 (1012)
T ss_pred HHHHHHhCCC---ceEEEEEccCccccc--cCHHHHHHHH-HcCCEEEeCCceEEEEC--CeEEEEEEEeecccCCCcee
Confidence 3322222242 25888887653 332 2334444444 57999999988888873 222221
Q ss_pred --eCCCceEEeecEEEECCCCCch-hhhhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHH
Q psy8791 303 --SEDKTERLPYAIMHVTPPMGPV-PELATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKV 378 (706)
Q Consensus 303 --~~~~g~~i~~D~vI~a~G~~~~-~~~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~ 378 (706)
..+++.++++|+||+|+|..|+ .++...++ .+++|++.||+++++ |+.|+|||+|||+.. |.+...|+.||+.
T Consensus 754 ~v~~Gee~~I~aD~VIvAiG~~Pnt~lle~~GL~ld~~G~I~VD~~~~~-Ts~pgVFAaGD~a~G--P~tVv~AIaqGr~ 830 (1012)
T TIGR03315 754 PVGTGETVDLPADTVIAAVGEQVDTDLLQKNGIPLDEYGWPVVNQATGE-TNITNVFVIGDANRG--PATIVEAIADGRK 830 (1012)
T ss_pred eecCCCeEEEEeCEEEEecCCcCChHHHHhcCcccCCCCCEEeCCCCCc-cCCCCEEEEeCcCCC--ccHHHHHHHHHHH
Confidence 1123347999999999999998 55666777 688899999984355 899999999999876 4588899999999
Q ss_pred HHHHHHHHH
Q psy8791 379 VYDNLSAVM 387 (706)
Q Consensus 379 ~a~ni~~~l 387 (706)
+|.+|.+..
T Consensus 831 AA~nIl~~~ 839 (1012)
T TIGR03315 831 AANAILSRE 839 (1012)
T ss_pred HHHHHhccc
Confidence 999997543
No 56
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=99.92 E-value=1.2e-23 Score=234.59 Aligned_cols=291 Identities=18% Similarity=0.170 Sum_probs=189.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCccc--CcccccccCc-cccCccccccccccc-CCCcEEEE-
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYY--QPMFTLIGGG-MKKLSDSRRPMKSVL-PSGATWVK- 102 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~--~p~~~~~~~~-~~~~~~~~~~~~~~~-~~~v~~i~- 102 (706)
...+||+|||||+||++||.+|++. |++|+||++...... .+.++...+. .....++...+.+.. ..++++..
T Consensus 209 ~~~~dvvIIGgGpaGl~aA~~la~~--G~~v~li~~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~ 286 (517)
T PRK15317 209 KDPYDVLVVGGGPAGAAAAIYAARK--GIRTGIVAERFGGQVLDTMGIENFISVPETEGPKLAAALEEHVKEYDVDIMNL 286 (517)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCCCeeeccCcccccCCCCCCCHHHHHHHHHHHHHHCCCEEEcC
Confidence 4568999999999999999999998 999999987421100 0111111110 111112222233322 35788765
Q ss_pred ceeEEEEcCCC--EEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccc
Q psy8791 103 DKIVSFDPENN--RVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSG 180 (706)
Q Consensus 103 ~~v~~id~~~~--~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (706)
.+|++++.... .|.+.+|.++.||+||+|||+.++.+.+||.+
T Consensus 287 ~~V~~I~~~~~~~~V~~~~g~~i~a~~vViAtG~~~r~~~ipG~~----------------------------------- 331 (517)
T PRK15317 287 QRASKLEPAAGLIEVELANGAVLKAKTVILATGARWRNMNVPGED----------------------------------- 331 (517)
T ss_pred CEEEEEEecCCeEEEEECCCCEEEcCEEEECCCCCcCCCCCCCHH-----------------------------------
Confidence 58999988643 56677788899999999999999888888821
Q ss_pred hhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCC
Q psy8791 181 LQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMG 260 (706)
Q Consensus 181 l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~ 260 (706)
+.... .+......+.. .+.+.++ +.++|+.. +...+..+...+. +|+++++.+
T Consensus 332 --~~~~~---~v~~~~~~~~~--------~~~gk~V--------vVVGgG~~--g~e~A~~L~~~~~----~Vtlv~~~~ 384 (517)
T PRK15317 332 --EYRNK---GVAYCPHCDGP--------LFKGKRV--------AVIGGGNS--GVEAAIDLAGIVK----HVTVLEFAP 384 (517)
T ss_pred --HhcCc---eEEEeeccCch--------hcCCCEE--------EEECCCHH--HHHHHHHHHhcCC----EEEEEEECc
Confidence 10000 11100000000 0122222 22333322 2223334555543 589998887
Q ss_pred cCCCchhHHHHHHHHHHh-CCceEEcCCceEEEeCCCCEE---EEEeCCCc--eEEeecEEEECCCCCchh-hhhcCCC-
Q psy8791 261 VLFPSPFYAEKIHDILIG-RGVDVHKGKALVEIDLANKEA---VFKSEDKT--ERLPYAIMHVTPPMGPVP-ELATSRL- 332 (706)
Q Consensus 261 ~~~~~~~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~~v---~~~~~~~g--~~i~~D~vI~a~G~~~~~-~~~~~~l- 332 (706)
.+... ..+.+.+.+ .||++++++.+.++..+++.+ .+....+| +++++|.+++++|.+|++ ++... +
T Consensus 385 ~l~~~----~~l~~~l~~~~gI~i~~~~~v~~i~~~~g~v~~v~~~~~~~g~~~~i~~D~v~~~~G~~p~~~~l~~~-v~ 459 (517)
T PRK15317 385 ELKAD----QVLQDKLRSLPNVTIITNAQTTEVTGDGDKVTGLTYKDRTTGEEHHLELEGVFVQIGLVPNTEWLKGT-VE 459 (517)
T ss_pred ccccc----HHHHHHHhcCCCcEEEECcEEEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeECCccCchHHhhh-ee
Confidence 66432 345566665 699999999999998775443 33222223 469999999999999984 55444 5
Q ss_pred CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCC
Q psy8791 333 VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNR 390 (706)
Q Consensus 333 ~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~ 390 (706)
.+++|++.||+ ++| |+.|||||+|||+..+. +....|+.+|..||.++.+.+...
T Consensus 460 ~~~~g~i~vd~-~l~-Ts~p~IyAaGDv~~~~~-k~~~~A~~eG~~Aa~~~~~~l~~~ 514 (517)
T PRK15317 460 LNRRGEIIVDA-RGA-TSVPGVFAAGDCTTVPY-KQIIIAMGEGAKAALSAFDYLIRN 514 (517)
T ss_pred eCCCCcEEECc-CCC-CCCCCEEECccccCCCC-CEEEEhhhhHHHHHHHHHHHHhhc
Confidence 67789999999 788 89999999999998753 556789999999999999888654
No 57
>PTZ00153 lipoamide dehydrogenase; Provisional
Probab=99.91 E-value=1.9e-22 Score=226.22 Aligned_cols=283 Identities=16% Similarity=0.179 Sum_probs=182.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC-CcccC-------cccc---------cc-------cCccc----
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD-DHYYQ-------PMFT---------LI-------GGGMK---- 81 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~-~~~~~-------p~~~---------~~-------~~~~~---- 81 (706)
++||+|||||+||..||..++++ |.+|+|||+.. ..... |.-. .. .-|..
T Consensus 116 ~yDviVIG~G~gG~~aA~~aa~~--G~kV~lie~~~~~lGGtCvn~GCiPsK~l~~~a~~~~~~~~~~~~~~~Gi~~~~~ 193 (659)
T PTZ00153 116 EYDVGIIGCGVGGHAAAINAMER--GLKVIIFTGDDDSIGGTCVNVGCIPSKALLYATGKYRELKNLAKLYTYGIYTNAF 193 (659)
T ss_pred cCCEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCCCccccceeEeCCcchHHHHHHHHHHHHHHhccccccCCeeeccc
Confidence 57999999999999999999999 99999999752 11111 1100 00 00100
Q ss_pred -----c-------C-cccccc------------------cccccC-C-------CcEEEEceeEEEEcCCCEEEe-CCCe
Q psy8791 82 -----K-------L-SDSRRP------------------MKSVLP-S-------GATWVKDKIVSFDPENNRVRT-QAGS 121 (706)
Q Consensus 82 -----~-------~-~~~~~~------------------~~~~~~-~-------~v~~i~~~v~~id~~~~~v~~-~~g~ 121 (706)
+ . .....+ +...+. . +++++.++..-+++ ++|.+ .+|+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~vi~G~a~f~~~--~~v~v~~~g~ 271 (659)
T PTZ00153 194 KNGKNDPVERNQLVADTVQIDITKLKEYTQSVIDKLRGGIENGLKSKKFCKNSEHVQVIYERGHIVDK--NTIKSEKSGK 271 (659)
T ss_pred cccccccccccccccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCceEEEEeEEEEecC--CeEEEccCCE
Confidence 0 0 000011 111111 1 36777766654443 44544 3567
Q ss_pred EEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHH
Q psy8791 122 EISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYV 201 (706)
Q Consensus 122 ~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~ 201 (706)
++.||+||||||+.+..|++++.+ . . .+ ++.+.+
T Consensus 272 ~i~ad~lIIATGS~P~~P~~~~~~-------------------------------------~----~--~V---~ts~d~ 305 (659)
T PTZ00153 272 EFKVKNIIIATGSTPNIPDNIEVD-------------------------------------Q----K--SV---FTSDTA 305 (659)
T ss_pred EEECCEEEEcCCCCCCCCCCCCCC-------------------------------------C----C--cE---EehHHh
Confidence 899999999999998876655411 0 0 11 122222
Q ss_pred HHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHH-Hh
Q psy8791 202 EKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDIL-IG 278 (706)
Q Consensus 202 ~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l-~~ 278 (706)
.. +....+ ..+.++|+.. +....+.+...|. +|+++++.+++++ ++++.+.+++.+ ++
T Consensus 306 ~~----l~~lpk---------~VvIVGgG~i--GvE~A~~l~~~G~----eVTLIe~~~~ll~~~d~eis~~l~~~ll~~ 366 (659)
T PTZ00153 306 VK----LEGLQN---------YMGIVGMGII--GLEFMDIYTALGS----EVVSFEYSPQLLPLLDADVAKYFERVFLKS 366 (659)
T ss_pred hh----hhhcCC---------ceEEECCCHH--HHHHHHHHHhCCC----eEEEEeccCcccccCCHHHHHHHHHHHhhc
Confidence 21 111211 1223344422 2223355666664 5999999998886 677888888875 67
Q ss_pred CCceEEcCCceEEEeCCCC--EEEEEeC----C--Cc--------eEEeecEEEECCCCCchhhh---hcCCCCCCCCce
Q psy8791 279 RGVDVHKGKALVEIDLANK--EAVFKSE----D--KT--------ERLPYAIMHVTPPMGPVPEL---ATSRLVDQSGYV 339 (706)
Q Consensus 279 ~gV~v~~~~~v~~i~~~~~--~v~~~~~----~--~g--------~~i~~D~vI~a~G~~~~~~~---~~~~l~~~~G~i 339 (706)
+||++++++.|.+|+.+++ .+.+... + ++ +++++|.||||+|.+||... ...++..++|+|
T Consensus 367 ~GV~I~~~~~V~~I~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~i~aD~VlvAtGr~Pnt~~L~l~~~gi~~~~G~I 446 (659)
T PTZ00153 367 KPVRVHLNTLIEYVRAGKGNQPVIIGHSERQTGESDGPKKNMNDIKETYVDSCLVATGRKPNTNNLGLDKLKIQMKRGFV 446 (659)
T ss_pred CCcEEEcCCEEEEEEecCCceEEEEEEeccccccccccccccccceEEEcCEEEEEECcccCCccCCchhcCCcccCCEE
Confidence 9999999999999986542 2433211 1 11 37999999999999999542 455664446999
Q ss_pred eeCccccccCC-----CCCEEEccccCCCCCCchHHHHHHhHHHHHHHHH
Q psy8791 340 NVDKATLQHVK-----YSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 340 ~vd~~~l~~~~-----~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~ 384 (706)
.||+ +||... .|||||+|||+.. +++++.|..||+++|+||.
T Consensus 447 ~VDe-~lqTs~~~~~~v~~IYAiGDv~g~--~~La~~A~~qg~~aa~ni~ 493 (659)
T PTZ00153 447 SVDE-HLRVLREDQEVYDNIFCIGDANGK--QMLAHTASHQALKVVDWIE 493 (659)
T ss_pred eECC-CCCcCCCCCCCCCCEEEEEecCCC--ccCHHHHHHHHHHHHHHHc
Confidence 9999 788431 6999999999865 4688999999999999995
No 58
>PRK12810 gltD glutamate synthase subunit beta; Reviewed
Probab=99.91 E-value=5.1e-23 Score=226.76 Aligned_cols=328 Identities=14% Similarity=0.087 Sum_probs=189.1
Q ss_pred CccccccccccccccccccC--C-CCCCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCc
Q psy8791 3 SLKLCPLKSYNLLSSSFSTS--P-LSSSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGG 79 (706)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~ 79 (706)
++.|+.++.|......-... . .......++|+|||||+||++||..|++. +++|+|||+.+....... ..++..
T Consensus 113 ~v~i~~l~r~~~~~~~~~~~~~~~~~~~~~~~~VvIIGaGpAGl~aA~~l~~~--G~~V~vie~~~~~GG~l~-~gip~~ 189 (471)
T PRK12810 113 PVTIKNIERYIIDKAFEEGWVKPDPPVKRTGKKVAVVGSGPAGLAAADQLARA--GHKVTVFERADRIGGLLR-YGIPDF 189 (471)
T ss_pred CccHHHHHHHHHHHHHHcCCCCCCCCcCCCCCEEEEECcCHHHHHHHHHHHhC--CCcEEEEecCCCCCceee-ecCCcc
Confidence 46677777765533211111 1 11223457999999999999999999998 899999999875321100 011111
Q ss_pred cccCcccccccccccCCCcEEEEceeEEEEcCCCEEEeCCCeEEEecEEEEccccc-cccCCCCCCcccccccccccccc
Q psy8791 80 MKKLSDSRRPMKSVLPSGATWVKDKIVSFDPENNRVRTQAGSEISYEYMIVASGIQ-MYYDRVKGPSALINALGHCDLVR 158 (706)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~i~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~-~~~~~~~g~~~~~~~~~~~~~~~ 158 (706)
....+.+......+...++++..++....+... . .....||+||+|||+. +..+.+||.+ ..
T Consensus 190 ~~~~~~~~~~~~~~~~~gv~~~~~~~v~~~~~~-----~-~~~~~~d~vvlAtGa~~~~~l~ipG~~----~~------- 252 (471)
T PRK12810 190 KLEKEVIDRRIELMEAEGIEFRTNVEVGKDITA-----E-ELLAEYDAVFLGTGAYKPRDLGIPGRD----LD------- 252 (471)
T ss_pred cCCHHHHHHHHHHHHhCCcEEEeCCEECCcCCH-----H-HHHhhCCEEEEecCCCCCCcCCCCCcc----CC-------
Confidence 111111111223344578888876654433211 1 1134799999999997 6677888832 00
Q ss_pred cccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHH
Q psy8791 159 SFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIG 238 (706)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~ 238 (706)
++... .+........+............+...++++|+. - +...
T Consensus 253 --------------------------------gV~~~--~~~l~~~~~~~~~~~~~~~~~~~gk~VvVIGgG~-~-g~e~ 296 (471)
T PRK12810 253 --------------------------------GVHFA--MDFLIQNTRRVLGDETEPFISAKGKHVVVIGGGD-T-GMDC 296 (471)
T ss_pred --------------------------------CcEEH--HHHHHHHHhhhccccccccccCCCCEEEEECCcH-H-HHHH
Confidence 00000 0000000000000000000000112223344442 2 2222
Q ss_pred HHHHHHcCCCCCcEEEEEeCCCcCCCch-------hHHH-HHHHHHHhCCceEEcCCceEEEeCCCCEEEEEe-----C-
Q psy8791 239 DEYLRKHKKRDAAKLTYCTGMGVLFPSP-------FYAE-KIHDILIGRGVDVHKGKALVEIDLANKEAVFKS-----E- 304 (706)
Q Consensus 239 ~~~l~~~g~~~~~~v~l~~~~~~~~~~~-------~~~~-~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~-----~- 304 (706)
+..+.+.|.. +|+..+..+...... .+.. ...+.+++.||++++++.+.+|..+++.++.+. .
T Consensus 297 A~~~~~~ga~---~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GV~i~~~~~~~~i~~~~g~v~~V~~~~~~~~ 373 (471)
T PRK12810 297 VGTAIRQGAK---SVTQRDIMPMPPSRRNKNNPWPYWPMKLEVSNAHEEGVEREFNVQTKEFEGENGKVTGVKVVRTELG 373 (471)
T ss_pred HHHHHHcCCC---eEEEccccCCCccccccccCCcccchHHHHHHHHHcCCeEEeccCceEEEccCCEEEEEEEEEEEec
Confidence 2334444432 366655443221110 1111 135667789999999999999986444443211 1
Q ss_pred --------CCceEEeecEEEECCCCCch-h-hhhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHH
Q psy8791 305 --------DKTERLPYAIMHVTPPMGPV-P-ELATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVA 373 (706)
Q Consensus 305 --------~~g~~i~~D~vI~a~G~~~~-~-~~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~ 373 (706)
++..++++|.||+++|..|+ . ++...++ .+++|++.+|+.+++ |+.|+|||+|||+.. +.+...|+
T Consensus 374 ~g~~~~~~g~~~~i~~D~VI~A~G~~p~~~~l~~~~gl~~~~~g~i~vd~~~~~-Ts~~gVfa~GD~~~g--~~~~~~Av 450 (471)
T PRK12810 374 EGDFEPVEGSEFVLPADLVLLAMGFTGPEAGLLAQFGVELDERGRVAAPDNAYQ-TSNPKVFAAGDMRRG--QSLVVWAI 450 (471)
T ss_pred CCCccccCCceEEEECCEEEECcCcCCCchhhccccCcccCCCCCEEeCCCccc-CCCCCEEEccccCCC--chhHHHHH
Confidence 12257999999999999998 3 5666677 677899999832677 899999999999985 34778899
Q ss_pred HhHHHHHHHHHHHHcCCCC
Q psy8791 374 GQCKVVYDNLSAVMKNRAL 392 (706)
Q Consensus 374 ~qg~~~a~ni~~~l~g~~~ 392 (706)
.||+.+|.+|.+.|.|+++
T Consensus 451 ~~G~~AA~~i~~~L~g~~~ 469 (471)
T PRK12810 451 AEGRQAARAIDAYLMGSTA 469 (471)
T ss_pred HHHHHHHHHHHHHHhcCCC
Confidence 9999999999999988764
No 59
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional
Probab=99.91 E-value=6e-23 Score=238.58 Aligned_cols=296 Identities=15% Similarity=0.165 Sum_probs=181.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCccccc-ccCccccCcccccccccccCCCcEEEEceeE
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTL-IGGGMKKLSDSRRPMKSVLPSGATWVKDKIV 106 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~i~~~v~ 106 (706)
...++|+|||||+|||+||.+|+++ |++|+|||+.+.... .+.+ ++......+.+....+.+...++++..+...
T Consensus 429 ~~~~~V~IIGaGpAGl~aA~~l~~~--G~~V~v~e~~~~~GG--~l~~gip~~rlp~~~~~~~~~~l~~~gv~~~~~~~v 504 (752)
T PRK12778 429 KNGKKVAVIGSGPAGLSFAGDLAKR--GYDVTVFEALHEIGG--VLKYGIPEFRLPKKIVDVEIENLKKLGVKFETDVIV 504 (752)
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHC--CCeEEEEecCCCCCC--eeeecCCCCCCCHHHHHHHHHHHHHCCCEEECCCEE
Confidence 3567999999999999999999999 999999999764221 1111 1111111111222233444578898776543
Q ss_pred EEEcCCCEEEeCCCeEEEecEEEEcccc-ccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhh
Q psy8791 107 SFDPENNRVRTQAGSEISYEYMIVASGI-QMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEAL 185 (706)
Q Consensus 107 ~id~~~~~v~~~~g~~~~yd~lviAtG~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 185 (706)
.+.+++++.....||+||||||+ .++.+++||.+ +.|.
T Consensus 505 -----~~~v~~~~l~~~~ydavvlAtGa~~~~~l~ipG~~----~~gV-------------------------------- 543 (752)
T PRK12778 505 -----GKTITIEELEEEGFKGIFIASGAGLPNFMNIPGEN----SNGV-------------------------------- 543 (752)
T ss_pred -----CCcCCHHHHhhcCCCEEEEeCCCCCCCCCCCCCCC----CCCc--------------------------------
Confidence 23455555445679999999998 57888899832 1110
Q ss_pred cCCCCCcccCCChhHHHHHHHHHHhcc-CCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCc-CC
Q psy8791 186 DQPDSGVSTNYSPQYVEKTLRNLQHFQ-SGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGV-LF 263 (706)
Q Consensus 186 ~~~~~~v~~~~~~~~~~~~~~~l~~~~-~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~-~~ 263 (706)
++...+........... ........+...++++|+.. +...+..+.+.|.. +|+++++.+. .+
T Consensus 544 ----------~~~~~~l~~~~~~~~~~~~~~~~~~~gk~VvVIGgG~~--a~d~A~~~~r~Ga~---~Vtlv~r~~~~~~ 608 (752)
T PRK12778 544 ----------MSSNEYLTRVNLMDAASPDSDTPIKFGKKVAVVGGGNT--AMDSARTAKRLGAE---RVTIVYRRSEEEM 608 (752)
T ss_pred ----------EEHHHHHHHHhhcccccccccCcccCCCcEEEECCcHH--HHHHHHHHHHcCCC---eEEEeeecCcccC
Confidence 00000000000000000 00000001222333445432 22233445556632 4888887653 23
Q ss_pred CchhHHHHHHHHHHhCCceEEcCCceEEEeCC-CCEEEEEeC--------------------CCceEEeecEEEECCCCC
Q psy8791 264 PSPFYAEKIHDILIGRGVDVHKGKALVEIDLA-NKEAVFKSE--------------------DKTERLPYAIMHVTPPMG 322 (706)
Q Consensus 264 ~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~-~~~v~~~~~--------------------~~g~~i~~D~vI~a~G~~ 322 (706)
+ ... .. .+.+++.||++++++.+.++..+ ++.++.... ++..++++|+||+|+|+.
T Consensus 609 ~-~~~-~e-~~~~~~~GV~i~~~~~~~~i~~~~~g~v~~v~~~~~~~~~~~~~G~~~~~~~~g~~~~i~~D~Vi~A~G~~ 685 (752)
T PRK12778 609 P-ARL-EE-VKHAKEEGIEFLTLHNPIEYLADEKGWVKQVVLQKMELGEPDASGRRRPVAIPGSTFTVDVDLVIVSVGVS 685 (752)
T ss_pred C-CCH-HH-HHHHHHcCCEEEecCcceEEEECCCCEEEEEEEEEEEecCcCCCCCCCceecCCCeEEEECCEEEECcCCC
Confidence 2 111 11 23577889999999988888643 333321110 122369999999999999
Q ss_pred chhhhhc-C-CC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCC
Q psy8791 323 PVPELAT-S-RL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNR 390 (706)
Q Consensus 323 ~~~~~~~-~-~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~ 390 (706)
|+..+.. . ++ .+++|+|.||+ +++ |+.|+|||+|||+.. +.++..|+.+|+.+|.+|.+.|.++
T Consensus 686 p~~~l~~~~~gl~~~~~G~i~vd~-~~~-Ts~~gVfA~GD~~~g--~~~vv~Av~~G~~AA~~I~~~L~~~ 752 (752)
T PRK12778 686 PNPLVPSSIPGLELNRKGTIVVDE-EMQ-SSIPGIYAGGDIVRG--GATVILAMGDGKRAAAAIDEYLSSK 752 (752)
T ss_pred CCccccccccCceECCCCCEEeCC-CCC-CCCCCEEEeCCccCC--cHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9965443 2 66 67789999998 565 899999999999976 4578899999999999999998764
No 60
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional
Probab=99.90 E-value=1.4e-22 Score=236.62 Aligned_cols=296 Identities=16% Similarity=0.150 Sum_probs=183.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCcccccccccccCCCcEEEEceeEEE
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 108 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~v~~i 108 (706)
..++|+|||||+|||+||.+|+++ |++|||||+.+.....- ...++......+.+....+.+...+++|..+...+
T Consensus 305 ~gkkVaVIGsGPAGLsaA~~Lar~--G~~VtVfE~~~~~GG~l-~yGIP~~rlp~~vi~~~i~~l~~~Gv~f~~n~~vG- 380 (944)
T PRK12779 305 VKPPIAVVGSGPSGLINAYLLAVE--GFPVTVFEAFHDLGGVL-RYGIPEFRLPNQLIDDVVEKIKLLGGRFVKNFVVG- 380 (944)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--CCeEEEEeeCCCCCceE-EccCCCCcChHHHHHHHHHHHHhhcCeEEEeEEec-
Confidence 468999999999999999999999 99999999987532210 01122111111122233444555789988765433
Q ss_pred EcCCCEEEeCCCeEEEecEEEEcccc-ccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcC
Q psy8791 109 DPENNRVRTQAGSEISYEYMIVASGI-QMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQ 187 (706)
Q Consensus 109 d~~~~~v~~~~g~~~~yd~lviAtG~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 187 (706)
+.+++++.....||+|++|||+ .++.+++||.+ +.|... ..+.+
T Consensus 381 ----~dit~~~l~~~~yDAV~LAtGA~~pr~l~IpG~d----l~GV~~-------------------------a~dfL-- 425 (944)
T PRK12779 381 ----KTATLEDLKAAGFWKIFVGTGAGLPTFMNVPGEH----LLGVMS-------------------------ANEFL-- 425 (944)
T ss_pred ----cEEeHHHhccccCCEEEEeCCCCCCCcCCCCCCc----CcCcEE-------------------------HHHHH--
Confidence 3466666655679999999999 47888899821 111100 00000
Q ss_pred CCCCcccCCChhHHHHHHHHHHhccCC---CEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCc-CC
Q psy8791 188 PDSGVSTNYSPQYVEKTLRNLQHFQSG---PVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGV-LF 263 (706)
Q Consensus 188 ~~~~v~~~~~~~~~~~~~~~l~~~~~g---~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~-~~ 263 (706)
...+........ ......+...++++|+. .+.-....+.+.|. +|+++.+.+. .+
T Consensus 426 ---------------~~~~~~~~~~~~~~~~~~~~~Gk~VvVIGGG~--tA~D~A~ta~R~Ga----~Vtlv~rr~~~~m 484 (944)
T PRK12779 426 ---------------TRVNLMRGLDDDYETPLPEVKGKEVFVIGGGN--TAMDAARTAKRLGG----NVTIVYRRTKSEM 484 (944)
T ss_pred ---------------HHHHhhccccccccccccccCCCEEEEECCCH--HHHHHHHHHHHcCC----EEEEEEecCcccc
Confidence 000000000000 00000112223344542 23333445566664 3888876643 22
Q ss_pred CchhHHHHHHHHHHhCCceEEcCCceEEEeCCC--CEEEEEe-------------------CCCceEEeecEEEECCCCC
Q psy8791 264 PSPFYAEKIHDILIGRGVDVHKGKALVEIDLAN--KEAVFKS-------------------EDKTERLPYAIMHVTPPMG 322 (706)
Q Consensus 264 ~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~--~~v~~~~-------------------~~~g~~i~~D~vI~a~G~~ 322 (706)
+.....++.. .+.||+++.+..+.+|..++ +.+.... .++..++++|+||+|+|+.
T Consensus 485 --pa~~~e~~~a-~eeGV~~~~~~~p~~i~~d~~~~~V~~v~~~~~~l~~~d~~Gr~~~~~~G~e~~i~aD~VI~AiG~~ 561 (944)
T PRK12779 485 --PARVEELHHA-LEEGINLAVLRAPREFIGDDHTHFVTHALLDVNELGEPDKSGRRSPKPTGEIERVPVDLVIMALGNT 561 (944)
T ss_pred --cccHHHHHHH-HHCCCEEEeCcceEEEEecCCCCEEEEEEEEEEEeccccCcCceeeecCCceEEEECCEEEEcCCcC
Confidence 2233334443 46799999999999987542 2232110 1122469999999999999
Q ss_pred chhhhhcC--CC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCC
Q psy8791 323 PVPELATS--RL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNR 390 (706)
Q Consensus 323 ~~~~~~~~--~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~ 390 (706)
|++.+... ++ .+++|.|.||+.+++ |+.|+|||+|||+.. +.+...|+.+|+.||.+|.++|...
T Consensus 562 p~~~l~~~~~gle~~~~G~I~vd~~~~~-Ts~pgVFAaGD~~~G--~~~vv~Ai~eGr~AA~~I~~~L~~~ 629 (944)
T PRK12779 562 ANPIMKDAEPGLKTNKWGTIEVEKGSQR-TSIKGVYSGGDAARG--GSTAIRAAGDGQAAAKEIVGEIPFT 629 (944)
T ss_pred CChhhhhcccCceECCCCCEEECCCCCc-cCCCCEEEEEcCCCC--hHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99765443 56 677899999973344 899999999999976 3478899999999999999988654
No 61
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=99.90 E-value=6.8e-23 Score=233.28 Aligned_cols=313 Identities=17% Similarity=0.202 Sum_probs=189.7
Q ss_pred Ccccccccccccccccc---ccCCCCCCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCc
Q psy8791 3 SLKLCPLKSYNLLSSSF---STSPLSSSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGG 79 (706)
Q Consensus 3 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~ 79 (706)
.+.||+++.|......- ...+.......++|+|||||+|||+||..|++. |++|+|||+++..... +.+-...
T Consensus 163 ~v~i~~l~r~~~~~~~~~~~~~~~~~~~~~~k~VaIIGaGpAGl~aA~~La~~--G~~Vtv~e~~~~~GG~--l~~gip~ 238 (652)
T PRK12814 163 PVSICALKRYAADRDMESAERYIPERAPKSGKKVAIIGAGPAGLTAAYYLLRK--GHDVTIFDANEQAGGM--MRYGIPR 238 (652)
T ss_pred CcchhHHHHHHHHHHHhcCcccCCCCCCCCCCEEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCCCCce--eeecCCC
Confidence 46788888776533211 101111233457999999999999999999998 8999999998863211 1110001
Q ss_pred cccCcc-cccccccccCCCcEEEEceeEEEEcCCCEEEeCCCeEEEecEEEEcccccc-ccCCCCCCccccccccccccc
Q psy8791 80 MKKLSD-SRRPMKSVLPSGATWVKDKIVSFDPENNRVRTQAGSEISYEYMIVASGIQM-YYDRVKGPSALINALGHCDLV 157 (706)
Q Consensus 80 ~~~~~~-~~~~~~~~~~~~v~~i~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~-~~~~~~g~~~~~~~~~~~~~~ 157 (706)
...++. .......+...++++..+.+.+++ +.+.+. ...||+|++|||+.+ ..+++||.+ ..
T Consensus 239 ~~~~~~~~~~~~~~l~~~Gv~i~~~~~v~~d-----v~~~~~-~~~~DaVilAtGa~~~~~~~ipG~~----~~------ 302 (652)
T PRK12814 239 FRLPESVIDADIAPLRAMGAEFRFNTVFGRD-----ITLEEL-QKEFDAVLLAVGAQKASKMGIPGEE----LP------ 302 (652)
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEeCCcccCc-----cCHHHH-HhhcCEEEEEcCCCCCCCCCCCCcC----cC------
Confidence 111111 111233344468888776654332 222222 235999999999875 456788821 00
Q ss_pred ccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHH---hccCCCEEEecCCCCeeeCChhHHH
Q psy8791 158 RSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQ---HFQSGPVLYTFPATPIKCGGAPMKA 234 (706)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~---~~~~g~~vv~~~~~~v~~~g~~~~~ 234 (706)
.+. +. ....+... ....+ ...+.++|+..
T Consensus 303 ---------------------------------gv~---~~---~~~l~~~~~~~~~~~g-------k~VvVIGgG~~-- 334 (652)
T PRK12814 303 ---------------------------------GVI---SG---IDFLRNVALGTALHPG-------KKVVVIGGGNT-- 334 (652)
T ss_pred ---------------------------------CcE---eH---HHHHHHhhcCCcccCC-------CeEEEECCCHH--
Confidence 000 00 00111100 01111 22233444422
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeCCCc-CCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEE-----e-----
Q psy8791 235 VLIGDEYLRKHKKRDAAKLTYCTGMGV-LFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFK-----S----- 303 (706)
Q Consensus 235 ~~~~~~~l~~~g~~~~~~v~l~~~~~~-~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~-----~----- 303 (706)
+...+..+.+.|.. +|+++.+... .++ .....+.+. .+.||+++++..+.+|..+++.+.+. .
T Consensus 335 a~e~A~~l~~~Ga~---~Vtlv~r~~~~~mp--a~~~ei~~a-~~eGV~i~~~~~~~~i~~~~~~~~v~~~~~~~~~~d~ 408 (652)
T PRK12814 335 AIDAARTALRLGAE---SVTILYRRTREEMP--ANRAEIEEA-LAEGVSLRELAAPVSIERSEGGLELTAIKMQQGEPDE 408 (652)
T ss_pred HHHHHHHHHHcCCC---eEEEeeecCcccCC--CCHHHHHHH-HHcCCcEEeccCcEEEEecCCeEEEEEEEEEecccCC
Confidence 22233344555532 4888887654 343 122334444 35799999999988887544432211 0
Q ss_pred ---------CCCceEEeecEEEECCCCCchh-hhhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHH
Q psy8791 304 ---------EDKTERLPYAIMHVTPPMGPVP-ELATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAV 372 (706)
Q Consensus 304 ---------~~~g~~i~~D~vI~a~G~~~~~-~~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a 372 (706)
.++..++++|.||+++|..|+. ++...++ .+.+|++.||+. .+.|+.|+|||+|||+.. +.++..|
T Consensus 409 ~G~~~~~~~~g~~~~i~~D~VI~AiG~~p~~~ll~~~gl~~~~~G~I~vd~~-~~~Ts~pgVfA~GDv~~g--~~~v~~A 485 (652)
T PRK12814 409 SGRRRPVPVEGSEFTLQADTVISAIGQQVDPPIAEAAGIGTSRNGTVKVDPE-TLQTSVAGVFAGGDCVTG--ADIAINA 485 (652)
T ss_pred CCCCcceecCCceEEEECCEEEECCCCcCCcccccccCccccCCCcEeeCCC-CCcCCCCCEEEcCCcCCC--chHHHHH
Confidence 0112369999999999999994 5555677 677899999984 444999999999999975 4578899
Q ss_pred HHhHHHHHHHHHHHHcCCCC
Q psy8791 373 AGQCKVVYDNLSAVMKNRAL 392 (706)
Q Consensus 373 ~~qg~~~a~ni~~~l~g~~~ 392 (706)
+.||+.+|.+|.+.|.|+++
T Consensus 486 i~~G~~AA~~I~~~L~g~~~ 505 (652)
T PRK12814 486 VEQGKRAAHAIDLFLNGKPV 505 (652)
T ss_pred HHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999876
No 62
>KOG0405|consensus
Probab=99.90 E-value=4.2e-22 Score=194.65 Aligned_cols=298 Identities=14% Similarity=0.208 Sum_probs=205.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC---------------cccCc------------ccccccCcc
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD---------------HYYQP------------MFTLIGGGM 80 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~---------------~~~~p------------~~~~~~~~~ 80 (706)
...+|.+|||||-+|+++|++.++. |.++.|+|..-. .+|.. +|+.---+.
T Consensus 18 ~k~fDylvIGgGSGGvasARrAa~~--GAkv~l~E~~f~lGGTCVn~GCVPKKvm~~~a~~~~~~~da~~yG~~~~~~~~ 95 (478)
T KOG0405|consen 18 VKDFDYLVIGGGSGGVASARRAASH--GAKVALCELPFGLGGTCVNVGCVPKKVMWYAADYSEEMEDAKDYGFPINEEGS 95 (478)
T ss_pred ccccceEEEcCCcchhHHhHHHHhc--CceEEEEecCCCcCceEEeeccccceeEEehhhhhHHhhhhhhcCCccccccC
Confidence 3468999999999999999999999 999999997621 11100 000000000
Q ss_pred ccC-------ccccc-----ccccccCCCcEEEEceeEEEEcCCCEEEeCCCeE--EEecEEEEccccccccCCCCCCcc
Q psy8791 81 KKL-------SDSRR-----PMKSVLPSGATWVKDKIVSFDPENNRVRTQAGSE--ISYEYMIVASGIQMYYDRVKGPSA 146 (706)
Q Consensus 81 ~~~-------~~~~~-----~~~~~~~~~v~~i~~~v~~id~~~~~v~~~~g~~--~~yd~lviAtG~~~~~~~~~g~~~ 146 (706)
.+. +.... +.+.+.+.+++++.++..-+++.+-.|...||.+ +++.++.||||+++.+|+|||
T Consensus 96 fdW~~ik~krdayi~RLngIY~~~L~k~~V~~i~G~a~f~~~~~v~V~~~d~~~~~Ytak~iLIAtGg~p~~PnIpG--- 172 (478)
T KOG0405|consen 96 FDWKVIKQKRDAYILRLNGIYKRNLAKAAVKLIEGRARFVSPGEVEVEVNDGTKIVYTAKHILIATGGRPIIPNIPG--- 172 (478)
T ss_pred CcHHHHHhhhhHHHHHHHHHHHhhccccceeEEeeeEEEcCCCceEEEecCCeeEEEecceEEEEeCCccCCCCCCc---
Confidence 000 00000 1122234688999999888888777888888853 577899999999999999999
Q ss_pred cccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCee
Q psy8791 147 LINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIK 226 (706)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~ 226 (706)
+|++...+-|++ |.++++..+|+++|...++
T Consensus 173 ~E~gidSDgff~-------------------------------------------------Lee~Pkr~vvvGaGYIavE 203 (478)
T KOG0405|consen 173 AELGIDSDGFFD-------------------------------------------------LEEQPKRVVVVGAGYIAVE 203 (478)
T ss_pred hhhccccccccc-------------------------------------------------hhhcCceEEEEccceEEEE
Confidence 345543332221 2234444456666555555
Q ss_pred eCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeC
Q psy8791 227 CGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSE 304 (706)
Q Consensus 227 ~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~ 304 (706)
.+|- ++..|. +++++-+...++. ++.+++.+.+.|..+||++|.++.++++............
T Consensus 204 ~Agi-----------~~gLgs----ethlfiR~~kvLR~FD~~i~~~v~~~~~~~ginvh~~s~~~~v~K~~~g~~~~i~ 268 (478)
T KOG0405|consen 204 FAGI-----------FAGLGS----ETHLFIRQEKVLRGFDEMISDLVTEHLEGRGINVHKNSSVTKVIKTDDGLELVIT 268 (478)
T ss_pred hhhH-----------HhhcCC----eeEEEEecchhhcchhHHHHHHHHHHhhhcceeecccccceeeeecCCCceEEEE
Confidence 5542 555553 3788888888876 7889999999999999999999999988764432111122
Q ss_pred CCceEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHH
Q psy8791 305 DKTERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVY 380 (706)
Q Consensus 305 ~~g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a 380 (706)
..|+...+|.++||+|.+|+.. +++.|+ ++++|.|.||++ |.|+.|+||++||++.--. +...|.+.|+.+|
T Consensus 269 ~~~~i~~vd~llwAiGR~Pntk~L~le~vGVk~~~~g~IivDeY--q~Tnvp~I~avGDv~gk~~--LTPVAiaagr~la 344 (478)
T KOG0405|consen 269 SHGTIEDVDTLLWAIGRKPNTKGLNLENVGVKTDKNGAIIVDEY--QNTNVPSIWAVGDVTGKIN--LTPVAIAAGRKLA 344 (478)
T ss_pred eccccccccEEEEEecCCCCcccccchhcceeeCCCCCEEEecc--ccCCCCceEEeccccCcEe--cchHHHhhhhhHH
Confidence 2556667999999999999943 556688 899999999983 6699999999999987533 5567888999999
Q ss_pred HHHHHHHcCCCCCCccccee
Q psy8791 381 DNLSAVMKNRALPHEYNGYT 400 (706)
Q Consensus 381 ~ni~~~l~g~~~~~~~~~~~ 400 (706)
+.+-.. +++....|....
T Consensus 345 ~rlF~~--~~~~kldY~nVp 362 (478)
T KOG0405|consen 345 NRLFGG--GKDTKLDYENVP 362 (478)
T ss_pred HHhhcC--CCCCccccccCc
Confidence 887432 333345666543
No 63
>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional
Probab=99.89 E-value=8.1e-22 Score=232.39 Aligned_cols=323 Identities=15% Similarity=0.121 Sum_probs=188.0
Q ss_pred CccccccccccccccccccC-CCCCCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccc
Q psy8791 3 SLKLCPLKSYNLLSSSFSTS-PLSSSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMK 81 (706)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~ 81 (706)
.+.|..++.|......-... .+......++|+|||||+|||+||.+|+++ |++|+|||+.+....... ..++....
T Consensus 402 pv~I~~ler~~~d~~~~~~~~~~~~~~~~~kVaIIG~GPAGLsaA~~La~~--G~~VtV~E~~~~~GG~l~-~gip~~rl 478 (1006)
T PRK12775 402 SVGIGRLERFVGDNARAKPVKPPRFSKKLGKVAICGSGPAGLAAAADLVKY--GVDVTVYEALHVVGGVLQ-YGIPSFRL 478 (1006)
T ss_pred CeeecHHHHHHHHHHHHcCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHc--CCcEEEEecCCCCcceee-ccCCccCC
Confidence 45666666664332110111 111223457999999999999999999999 999999999875321100 11121111
Q ss_pred cCcccccccccccCCCcEEEEceeEEEEcCCCEEEeCCCe-EEEecEEEEccccc-cccCCCCCCccccccccccccccc
Q psy8791 82 KLSDSRRPMKSVLPSGATWVKDKIVSFDPENNRVRTQAGS-EISYEYMIVASGIQ-MYYDRVKGPSALINALGHCDLVRS 159 (706)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~i~~~v~~id~~~~~v~~~~g~-~~~yd~lviAtG~~-~~~~~~~g~~~~~~~~~~~~~~~~ 159 (706)
..+.+......+...++++..+.+.+.+ +++++.. ...||+||||||+. ++.+++||.+ ..|
T Consensus 479 ~~e~~~~~~~~l~~~Gv~~~~~~~vg~~-----~~~~~l~~~~~yDaViIATGa~~pr~l~IpG~~----l~g------- 542 (1006)
T PRK12775 479 PRDIIDREVQRLVDIGVKIETNKVIGKT-----FTVPQLMNDKGFDAVFLGVGAGAPTFLGIPGEF----AGQ------- 542 (1006)
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCccCCc-----cCHHHHhhccCCCEEEEecCCCCCCCCCCCCcC----CCC-------
Confidence 1122223344555678999877654322 2322211 24699999999984 7888899831 110
Q ss_pred ccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHH--Hh--ccCCCEEEecCCCCeeeCChhHHHH
Q psy8791 160 FVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNL--QH--FQSGPVLYTFPATPIKCGGAPMKAV 235 (706)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l--~~--~~~g~~vv~~~~~~v~~~g~~~~~~ 235 (706)
+ ++...+....+.. .. ..... +..+...++++|+.. +
T Consensus 543 --------------------------------V---~~a~~fL~~~~~~~~~~~~~~~~~--~~~Gk~VvVIGgG~t--A 583 (1006)
T PRK12775 543 --------------------------------V---YSANEFLTRVNLMGGDKFPFLDTP--ISLGKSVVVIGAGNT--A 583 (1006)
T ss_pred --------------------------------c---EEHHHHHHHHHhcCccccccccCC--ccCCCEEEEECCcHH--H
Confidence 0 0000000000000 00 00000 001222333455432 2
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCC-CCEEE---EEe------CC
Q psy8791 236 LIGDEYLRKHKKRDAAKLTYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLA-NKEAV---FKS------ED 305 (706)
Q Consensus 236 ~~~~~~l~~~g~~~~~~v~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~-~~~v~---~~~------~~ 305 (706)
.-....+.+.|.. .|+++.+....-. +..... .+.+++.||++++++.+.++..+ ++.++ +.. ..
T Consensus 584 ~D~A~~a~rlGa~---~Vtiv~rr~~~em-~a~~~e-~~~a~eeGI~~~~~~~p~~i~~~~~G~v~~v~~~~~~l~~~d~ 658 (1006)
T PRK12775 584 MDCLRVAKRLGAP---TVRCVYRRSEAEA-PARIEE-IRHAKEEGIDFFFLHSPVEIYVDAEGSVRGMKVEEMELGEPDE 658 (1006)
T ss_pred HHHHHHHHHcCCC---EEEEEeecCcccC-CCCHHH-HHHHHhCCCEEEecCCcEEEEeCCCCeEEEEEEEEEEecccCC
Confidence 2234445556642 3666654432211 111111 24577889999999999898643 33332 211 01
Q ss_pred C--------c--eEEeecEEEECCCCCchhhhhc--CCC-CCCCCceeeCc----cccccCCCCCEEEccccCCCCCCch
Q psy8791 306 K--------T--ERLPYAIMHVTPPMGPVPELAT--SRL-VDQSGYVNVDK----ATLQHVKYSNVFAIGDCSNLPTSKT 368 (706)
Q Consensus 306 ~--------g--~~i~~D~vI~a~G~~~~~~~~~--~~l-~~~~G~i~vd~----~~l~~~~~~~Ifa~GD~~~~~~~~~ 368 (706)
+ | .++++|+||+++|+.|+..+.. .++ ++++|+|.+|+ .+++ |+.|+|||+|||+.. +.+
T Consensus 659 ~Gr~~~~~~g~~~~i~~D~Vi~AiG~~p~~~~~~~~~gl~l~~~G~I~vd~~~v~~~~~-Ts~pgVFAaGDv~~G--~~~ 735 (1006)
T PRK12775 659 KGRRKPMPTGEFKDLECDTVIYALGTKANPIITQSTPGLALNKWGNIAADDGKLESTQS-TNLPGVFAGGDIVTG--GAT 735 (1006)
T ss_pred CCCccccCCCceEEEEcCEEEECCCcCCChhhhhccCCcccCCCCcEEeCCCccccCcC-CCCCCEEEecCcCCC--ccH
Confidence 1 2 3699999999999999954433 256 67789999996 2455 899999999999976 457
Q ss_pred HHHHHHhHHHHHHHHHHHHcCCC
Q psy8791 369 AAAVAGQCKVVYDNLSAVMKNRA 391 (706)
Q Consensus 369 ~~~a~~qg~~~a~ni~~~l~g~~ 391 (706)
...|+.+|+.+|.+|.+.|.+..
T Consensus 736 vv~Ai~~Gr~AA~~I~~~L~~~~ 758 (1006)
T PRK12775 736 VILAMGAGRRAARSIATYLRLGK 758 (1006)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Confidence 88999999999999999998754
No 64
>COG0446 HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]
Probab=99.89 E-value=2.2e-21 Score=212.24 Aligned_cols=314 Identities=24% Similarity=0.300 Sum_probs=220.3
Q ss_pred EEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC--cccCcccccccCccccCccccccccccc-CCCcEEEE-ceeEEE
Q psy8791 33 LLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD--HYYQPMFTLIGGGMKKLSDSRRPMKSVL-PSGATWVK-DKIVSF 108 (706)
Q Consensus 33 VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~i~-~~v~~i 108 (706)
++|||+|+||+++|..|++..++.+|+++...+. +..+|....+..+....+....+.. +. ..+++... .+|+++
T Consensus 1 ivivG~g~aG~~aa~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~v~~i 79 (415)
T COG0446 1 IVIVGGGAAGLSAATTLRRLLLAAEITLIGREPKYSYYRCPLSLYVGGGIASLEDLRYPPR-FNRATGIDVRTGTEVTSI 79 (415)
T ss_pred CEEECCcHHHHHHHHHHHhcCCCCCEEEEeCCCCCCCCCCccchHHhcccCCHHHhcccch-hHHhhCCEEeeCCEEEEe
Confidence 5899999999999999999877888887776654 4444555556555555555544443 22 34666655 689999
Q ss_pred EcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCC
Q psy8791 109 DPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQP 188 (706)
Q Consensus 109 d~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 188 (706)
|+.++.+.+.+| ++.||+|++|||+.+..++ +.. .+
T Consensus 80 d~~~~~v~~~~g-~~~yd~LvlatGa~~~~~~--~~~-----------------~~------------------------ 115 (415)
T COG0446 80 DPENKVVLLDDG-EIEYDYLVLATGARPRPPP--ISD-----------------WE------------------------ 115 (415)
T ss_pred cCCCCEEEECCC-cccccEEEEcCCCcccCCC--ccc-----------------cC------------------------
Confidence 999999999999 8999999999999987754 200 00
Q ss_pred CCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCCc---
Q psy8791 189 DSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFPS--- 265 (706)
Q Consensus 189 ~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~~--- 265 (706)
.+......+.++........ ....|..++..+++.+++.++++|. ++++++..+++++.
T Consensus 116 --~~~~~~~~~~~~~~~~~~~~------------~~~v~vvG~G~~gle~A~~~~~~G~----~v~l~e~~~~~~~~~~~ 177 (415)
T COG0446 116 --GVVTLRLREDAEALKGGAEP------------PKDVVVVGAGPIGLEAAEAAAKRGK----KVTLIEAADRLGGQLLD 177 (415)
T ss_pred --ceEEECCHHHHHHHHHHHhc------------cCeEEEECCcHHHHHHHHHHHHcCC----eEEEEEcccccchhhhh
Confidence 11111122222222222221 1112222334567788888999985 49999999999873
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEE--EeCCCceEEeecEEEECCCCCchhhhhcCC---CCCCCCcee
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVF--KSEDKTERLPYAIMHVTPPMGPVPELATSR---LVDQSGYVN 340 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~--~~~~~g~~i~~D~vI~a~G~~~~~~~~~~~---l~~~~G~i~ 340 (706)
+.+.+.+.+.++++||+++++..+.+|+...+.... ....++..+++|++++++|.+||..+.+.. +...+|++.
T Consensus 178 ~~~~~~~~~~l~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~p~~~l~~~~~~~~~~~~g~i~ 257 (415)
T COG0446 178 PEVAEELAELLEKYGVELLLGTKVVGVEGKGNTLVVERVVGIDGEEIKADLVIIGPGERPNVVLANDALPGLALAGGAVL 257 (415)
T ss_pred HHHHHHHHHHHHHCCcEEEeCCceEEEEcccCcceeeEEEEeCCcEEEeeEEEEeecccccHHHHhhCccceeccCCCEE
Confidence 789999999999999999999999999987654332 234478899999999999999997766653 577788999
Q ss_pred eCccccccCC-CCCEEEccccCCCCCC--------chHHHHHHhHHHHHHHHHHHHcC-CCC-CCcccceeeEEEEecCC
Q psy8791 341 VDKATLQHVK-YSNVFAIGDCSNLPTS--------KTAAAVAGQCKVVYDNLSAVMKN-RAL-PHEYNGYTSCPLVTGYS 409 (706)
Q Consensus 341 vd~~~l~~~~-~~~Ifa~GD~~~~~~~--------~~~~~a~~qg~~~a~ni~~~l~g-~~~-~~~~~~~~~~~~~~G~~ 409 (706)
||+ .++ ++ +++|||+|||+..+.+ ..++.+..+++.++.++.....- ..+ ...+..+..|....|..
T Consensus 258 v~~-~~~-~~~~~~v~a~GD~~~~~~~~~~~~~~~~~~~~a~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 335 (415)
T COG0446 258 VDE-RGG-TSKDPDVYAAGDVAEIPAAETGKGGRIALWAIAVAAGRIAAENIAGALRIPGLLGTVISDVGDLCAASTGLT 335 (415)
T ss_pred Ecc-ccc-cCCCCCEEeccceEeeecccCCceeeeechhhHhhhhHHHHHHhccccccccccCceEEEEcCeEEEEecCC
Confidence 999 455 54 9999999999987643 24567778888888888533000 111 23355566677677766
Q ss_pred eE
Q psy8791 410 KC 411 (706)
Q Consensus 410 ~~ 411 (706)
..
T Consensus 336 ~~ 337 (415)
T COG0446 336 EG 337 (415)
T ss_pred cc
Confidence 53
No 65
>KOG1335|consensus
Probab=99.88 E-value=7.3e-22 Score=195.48 Aligned_cols=284 Identities=17% Similarity=0.213 Sum_probs=194.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-------cc-------------cc-cccCccccCcccc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-------PM-------------FT-LIGGGMKKLSDSR 87 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~-------------~~-~~~~~~~~~~~~~ 87 (706)
..+|++|||||++|-.||.+.++. |.+-+.||++...... |+ .+ .+.........+.
T Consensus 38 ~d~DvvvIG~GpGGyvAAikAaQl--GlkTacvEkr~~LGGTcLnvGcIPSKALL~nSh~yh~~q~~~~~~rGi~vs~~~ 115 (506)
T KOG1335|consen 38 NDYDVVVIGGGPGGYVAAIKAAQL--GLKTACVEKRGTLGGTCLNVGCIPSKALLNNSHLYHEAQHEDFASRGIDVSSVS 115 (506)
T ss_pred ccCCEEEECCCCchHHHHHHHHHh--cceeEEEeccCccCceeeeccccccHHHhhhhHHHHHHhhhHHHhcCcccccee
Confidence 579999999999999999999999 9999999997653222 11 00 0000000000111
Q ss_pred c------------------ccccccC-CCcEEEEceeEEEEcCCCEEEeCCC--eEEEecEEEEccccccccCCCCCCcc
Q psy8791 88 R------------------PMKSVLP-SGATWVKDKIVSFDPENNRVRTQAG--SEISYEYMIVASGIQMYYDRVKGPSA 146 (706)
Q Consensus 88 ~------------------~~~~~~~-~~v~~i~~~v~~id~~~~~v~~~~g--~~~~yd~lviAtG~~~~~~~~~g~~~ 146 (706)
+ .+..+++ .+++++.+.-.-++|..-++.-.|| ..+..+++++|||+.- +++||++
T Consensus 116 ~dl~~~~~~k~~~vk~Lt~gi~~lfkknkV~~~kG~gsf~~p~~V~v~k~dg~~~ii~aKnIiiATGSeV--~~~PGI~- 192 (506)
T KOG1335|consen 116 LDLQAMMKAKDNAVKQLTGGIENLFKKNKVTYVKGFGSFLDPNKVSVKKIDGEDQIIKAKNIIIATGSEV--TPFPGIT- 192 (506)
T ss_pred cCHHHHHHHHHHHHHHHhhHHHHHhhhcCeEEEeeeEeecCCceEEEeccCCCceEEeeeeEEEEeCCcc--CCCCCeE-
Confidence 1 1223333 5677888777777776555555555 4679999999999964 3456742
Q ss_pred cccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCee
Q psy8791 147 LINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIK 226 (706)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~ 226 (706)
+++. .+ -+.+.+. .|...++.-.|++.|..+++
T Consensus 193 ----------------------------------IDek------kI---VSStgAL----sL~~vPk~~~viG~G~IGLE 225 (506)
T KOG1335|consen 193 ----------------------------------IDEK------KI---VSSTGAL----SLKEVPKKLTVIGAGYIGLE 225 (506)
T ss_pred ----------------------------------ecCc------eE---EecCCcc----chhhCcceEEEEcCceeeee
Confidence 1110 00 0111111 12233333334443333333
Q ss_pred eCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCC-EEE--E
Q psy8791 227 CGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANK-EAV--F 301 (706)
Q Consensus 227 ~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~-~v~--~ 301 (706)
.+ ..+.+.|. +||+++..+.+.+ +.++++.+++.|++.|++++++++|...+.++. .+. +
T Consensus 226 ~g-----------sV~~rLGs----eVT~VEf~~~i~~~mD~Eisk~~qr~L~kQgikF~l~tkv~~a~~~~dg~v~i~v 290 (506)
T KOG1335|consen 226 MG-----------SVWSRLGS----EVTVVEFLDQIGGVMDGEISKAFQRVLQKQGIKFKLGTKVTSATRNGDGPVEIEV 290 (506)
T ss_pred hh-----------hHHHhcCC----eEEEEEehhhhccccCHHHHHHHHHHHHhcCceeEeccEEEEeeccCCCceEEEE
Confidence 22 34777775 3999999988877 789999999999999999999999999987655 333 3
Q ss_pred EeCC--CceEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHh
Q psy8791 302 KSED--KTERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQ 375 (706)
Q Consensus 302 ~~~~--~g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~q 375 (706)
+... ..++++||.+++++|.+|-.. +++.|+ .|.+|++.||. .++ |.+||||++||+... |++++.|..|
T Consensus 291 e~ak~~k~~tle~DvlLVsiGRrP~t~GLgle~iGi~~D~r~rv~v~~-~f~-t~vP~i~~IGDv~~g--pMLAhkAeee 366 (506)
T KOG1335|consen 291 ENAKTGKKETLECDVLLVSIGRRPFTEGLGLEKIGIELDKRGRVIVNT-RFQ-TKVPHIYAIGDVTLG--PMLAHKAEEE 366 (506)
T ss_pred EecCCCceeEEEeeEEEEEccCcccccCCChhhcccccccccceeccc-ccc-ccCCceEEecccCCc--chhhhhhhhh
Confidence 2222 346799999999999999743 445576 78999999999 577 899999999999987 5599999999
Q ss_pred HHHHHHHH
Q psy8791 376 CKVVYDNL 383 (706)
Q Consensus 376 g~~~a~ni 383 (706)
|-.+.+.|
T Consensus 367 gI~~VE~i 374 (506)
T KOG1335|consen 367 GIAAVEGI 374 (506)
T ss_pred chhheeee
Confidence 98888887
No 66
>TIGR01317 GOGAT_sm_gam glutamate synthases, NADH/NADPH, small subunit. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit or homologous region. TIGR01316 describes a family in several archaeal and deeply branched bacterial lineages of a homotetrameric form for which there is no large subunit. Another model describes glutamate synthase small subunit from gamma and some alpha subdivision Proteobacteria plus paralogs of unknown function. This model describes the small subunit, or homologous region of longer forms proteins, of eukaryotes, Gram-positive bacteria, cyanobacteria, and some other lineages. All members with known function participate in NADH or NADPH-dependent reactions to interconvert between glutamine plus 2-oxoglutarate and two molecules of glutamate.
Probab=99.87 E-value=4.6e-21 Score=211.21 Aligned_cols=303 Identities=15% Similarity=0.120 Sum_probs=170.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCcccccccccccCCCcEEEEceeEEE
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 108 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~v~~i 108 (706)
..++|+|||||++|++||..|++. +++|+|||+.+.......+ .++......+.+......+...++++..+.....
T Consensus 142 ~~~~V~IIGaG~aGl~aA~~L~~~--g~~V~v~e~~~~~gG~l~~-gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~ 218 (485)
T TIGR01317 142 TGKKVAVVGSGPAGLAAADQLNRA--GHTVTVFEREDRCGGLLMY-GIPNMKLDKAIVDRRIDLLSAEGIDFVTNTEIGV 218 (485)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHc--CCeEEEEecCCCCCceeec-cCCCccCCHHHHHHHHHHHHhCCCEEECCCEeCC
Confidence 347999999999999999999998 8999999998853211000 0111111111122223334447888877654432
Q ss_pred EcCCCEEEeCCCeEEEecEEEEccccc-cccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcC
Q psy8791 109 DPENNRVRTQAGSEISYEYMIVASGIQ-MYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQ 187 (706)
Q Consensus 109 d~~~~~v~~~~g~~~~yd~lviAtG~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 187 (706)
+... +.....||.|++|||+. +..+++||.+ ..| .+. ..+.+..
T Consensus 219 ~~~~------~~~~~~~d~VilAtGa~~~~~l~i~G~~----~~g-------------V~~------------~~~~l~~ 263 (485)
T TIGR01317 219 DISA------DELKEQFDAVVLAGGATKPRDLPIPGRE----LKG-------------IHY------------AMEFLPS 263 (485)
T ss_pred ccCH------HHHHhhCCEEEEccCCCCCCcCCCCCcC----CCC-------------cEe------------HHHHHHH
Confidence 2211 11235799999999997 7778889832 000 000 0000000
Q ss_pred CCCCcccCCChhHHHHHHHHHHh-ccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCCc-
Q psy8791 188 PDSGVSTNYSPQYVEKTLRNLQH-FQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFPS- 265 (706)
Q Consensus 188 ~~~~v~~~~~~~~~~~~~~~l~~-~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~~- 265 (706)
.. ... .. .. .+.+.. ...+ ...++++|+. -....+...+ +.+. ..|++++.++..+..
T Consensus 264 ~~-~~~--~~-~~----~~~~~~~~~~g-------k~VvViGgG~-~g~d~a~~a~-~~ga---~~V~vv~~~~~~~~~~ 323 (485)
T TIGR01317 264 AT-KAL--LG-KD----FKDIIFIKAKG-------KKVVVIGGGD-TGADCVGTSL-RHGA---ASVHQFEIMPKPPEAR 323 (485)
T ss_pred Hh-hhh--cc-cc----ccccccccCCC-------CEEEEECCcH-HHHHHHHHHH-HcCC---CEEEEEEecCCChhhc
Confidence 00 000 00 00 000000 0111 1222334442 2222223333 3332 148888877654320
Q ss_pred ------hh------HHHHHHHHHHhCCceE-EcCCceEEEeCCC-CEEEEEe--------CCCc-----------eEEee
Q psy8791 266 ------PF------YAEKIHDILIGRGVDV-HKGKALVEIDLAN-KEAVFKS--------EDKT-----------ERLPY 312 (706)
Q Consensus 266 ------~~------~~~~~~~~l~~~gV~v-~~~~~v~~i~~~~-~~v~~~~--------~~~g-----------~~i~~ 312 (706)
+. .....++..+..||++ +++..+.+|..++ +.+..+. .++| .++++
T Consensus 324 ~~~~~~~~~~~~~e~~~a~~e~~~~~gv~~~~~~~~~~~i~~~~~g~v~~v~~~~~~~~~~~~Gr~~p~~~~g~~~~i~~ 403 (485)
T TIGR01317 324 AKDNPWPEWPRVYRVDYAHEEAAAHYGRDPREYSILTKEFIGDDEGKVTALRTVRVEWKKSQDGKWQFVEIPGSEEVFEA 403 (485)
T ss_pred ccccCCCccchhhhhHHHHHhhhhhcCccceEEecCcEEEEEcCCCeEEEEEEEEEEeccCCCCCccceecCCceEEEEC
Confidence 11 1122333344467654 4566777776542 3332111 1122 37999
Q ss_pred cEEEECCCCC-ch-hhhhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcC
Q psy8791 313 AIMHVTPPMG-PV-PELATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKN 389 (706)
Q Consensus 313 D~vI~a~G~~-~~-~~~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g 389 (706)
|+||+++|+. |+ .++...++ .+++|++.+++.+++ |+.|+|||+|||+.. +.++..|..+|+.+|.+|.++|.|
T Consensus 404 D~Vi~AiG~~~p~~~~~~~~gl~~~~~G~i~~~~~~~~-Ts~~gVfAaGD~~~g--~~~~~~Av~~G~~AA~~i~~~L~g 480 (485)
T TIGR01317 404 DLVLLAMGFVGPEQILLDDFGVKKTRRGNISAGYDDYS-TSIPGVFAAGDCRRG--QSLIVWAINEGRKAAAAVDRYLMG 480 (485)
T ss_pred CEEEEccCcCCCccccccccCcccCCCCCEEecCCCce-ECCCCEEEeeccCCC--cHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999996 76 45566677 577899966543555 999999999999875 447788999999999999999988
Q ss_pred CCC
Q psy8791 390 RAL 392 (706)
Q Consensus 390 ~~~ 392 (706)
++.
T Consensus 481 ~~~ 483 (485)
T TIGR01317 481 SSV 483 (485)
T ss_pred CCC
Confidence 654
No 67
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=99.87 E-value=8.2e-21 Score=217.38 Aligned_cols=300 Identities=15% Similarity=0.116 Sum_probs=171.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCcccccccccccCCCcEEEEceeEEE
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 108 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~v~~i 108 (706)
..++|+|||||+|||+||..|++. |++|+|||+.+.......+ .++......+.+......+...++++..+.....
T Consensus 326 ~~~~VaIIGaGpAGLsaA~~L~~~--G~~V~V~E~~~~~GG~l~~-gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~ 402 (654)
T PRK12769 326 SDKRVAIIGAGPAGLACADVLARN--GVAVTVYDRHPEIGGLLTF-GIPAFKLDKSLLARRREIFSAMGIEFELNCEVGK 402 (654)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCCCCceeee-cCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCC
Confidence 457999999999999999999998 8999999998753221111 1111111111111122333346788765443221
Q ss_pred EcCCCEEEeCCCeEEEecEEEEcccccc-ccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcC
Q psy8791 109 DPENNRVRTQAGSEISYEYMIVASGIQM-YYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQ 187 (706)
Q Consensus 109 d~~~~~v~~~~g~~~~yd~lviAtG~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 187 (706)
+ +.+.+. ...||.|++|||+.. ..+.+||.+ ..|...- ++++. .........
T Consensus 403 ~-----i~~~~~-~~~~DavilAtGa~~~~~l~i~g~~----~~Gv~~a---------------~~~l~--~~~~~~~~~ 455 (654)
T PRK12769 403 D-----ISLESL-LEDYDAVFVGVGTYRSMKAGLPNED----APGVYDA---------------LPFLI--ANTKQVMGL 455 (654)
T ss_pred c-----CCHHHH-HhcCCEEEEeCCCCCCCCCCCCCCC----CCCeEEh---------------HHHHH--HHHhhhccC
Confidence 1 122111 246999999999854 346677721 1110000 00000 000000000
Q ss_pred CCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcC-CCch
Q psy8791 188 PDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVL-FPSP 266 (706)
Q Consensus 188 ~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~-~~~~ 266 (706)
. .... .......+ ...++++|+. . +......+.+.|.. +|+++.+.+.. ++
T Consensus 456 ~--------~~~~-----~~~~~~~g--------k~VvVIGgG~-~-a~d~A~~a~r~ga~---~Vt~i~~~~~~~~~-- 507 (654)
T PRK12769 456 E--------ELPE-----EPFINTAG--------LNVVVLGGGD-T-AMDCVRTALRHGAS---NVTCAYRRDEANMP-- 507 (654)
T ss_pred c--------cccc-----cccccCCC--------CeEEEECCcH-H-HHHHHHHHHHcCCC---eEEEeEecCCCCCC--
Confidence 0 0000 00000111 1222334442 2 22222233445432 37887765443 33
Q ss_pred hHHHHHHHHHHhCCceEEcCCceEEEeC-CCCEE---EEEeC------CCc-----------eEEeecEEEECCCCCchh
Q psy8791 267 FYAEKIHDILIGRGVDVHKGKALVEIDL-ANKEA---VFKSE------DKT-----------ERLPYAIMHVTPPMGPVP 325 (706)
Q Consensus 267 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~-~~~~v---~~~~~------~~g-----------~~i~~D~vI~a~G~~~~~ 325 (706)
.. ....+.+++.||+++++..+.++.. +++.+ .+... .+| .++++|+||+|+|+.|++
T Consensus 508 ~~-~~e~~~~~~~Gv~~~~~~~~~~i~~~~~g~v~~v~~~~~~~~~~~~~G~~~~~~~~g~~~~i~~D~Vi~AiG~~p~~ 586 (654)
T PRK12769 508 GS-KKEVKNAREEGANFEFNVQPVALELNEQGHVCGIRFLRTRLGEPDAQGRRRPVPIPGSEFVMPADAVIMAFGFNPHG 586 (654)
T ss_pred CC-HHHHHHHHHcCCeEEeccCcEEEEECCCCeEEEEEEEEEEecCcCCCCCCcceeCCCceEEEECCEEEECccCCCCc
Confidence 11 1234567889999999999999863 23333 22110 112 369999999999999983
Q ss_pred --hhhcCCC-CCCCCceeeCcc---ccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCC
Q psy8791 326 --ELATSRL-VDQSGYVNVDKA---TLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNR 390 (706)
Q Consensus 326 --~~~~~~l-~~~~G~i~vd~~---~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~ 390 (706)
++...++ ++++|+|.||+. +++ |+.|+|||+||++.. +.+...|+.+|+.+|++|.++|.++
T Consensus 587 ~~~~~~~gl~~~~~G~i~vd~~~~~~~~-Ts~~gVfAaGD~~~g--~~~vv~Ai~~Gr~AA~~I~~~L~~~ 654 (654)
T PRK12769 587 MPWLESHGVTVDKWGRIIADVESQYRYQ-TSNPKIFAGGDAVRG--ADLVVTAMAEGRHAAQGIIDWLGVK 654 (654)
T ss_pred cccccccCCcCCCCCCEEeCCCcccCcc-cCCCCEEEcCCcCCC--CcHHHHHHHHHHHHHHHHHHHhCcC
Confidence 5556677 778899999862 255 899999999999876 3477899999999999999988653
No 68
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=99.87 E-value=1.3e-20 Score=207.01 Aligned_cols=296 Identities=14% Similarity=0.080 Sum_probs=169.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCcccc-cccccccCCCcEEEEceeEE
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSR-RPMKSVLPSGATWVKDKIVS 107 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~i~~~v~~ 107 (706)
..++|+|||||++||+||..|+++ |++|+++|+.+.......+ .++.... ..++. .....+...++++..+....
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~--G~~V~i~e~~~~~gG~l~~-gip~~~~-~~~~~~~~~~~~~~~Gv~~~~~~~v~ 215 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARA--GVQVVVFDRHPEIGGLLTF-GIPSFKL-DKAVLSRRREIFTAMGIEFHLNCEVG 215 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHc--CCeEEEEecCCCCCceeee-cCccccC-CHHHHHHHHHHHHHCCCEEECCCEeC
Confidence 457999999999999999999998 8999999998853211110 0111111 11111 11233344688886543221
Q ss_pred EEcCCCEEEeCCCeEEEecEEEEcccccc-ccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhc
Q psy8791 108 FDPENNRVRTQAGSEISYEYMIVASGIQM-YYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALD 186 (706)
Q Consensus 108 id~~~~~v~~~~g~~~~yd~lviAtG~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 186 (706)
+.+.+++ ....||.||+|||+.+ ..+++||.+ ..| .+. ..+.+.
T Consensus 216 -----~~~~~~~-~~~~~D~vilAtGa~~~~~~~i~g~~----~~g-------------V~~------------a~~~l~ 260 (467)
T TIGR01318 216 -----RDISLDD-LLEDYDAVFLGVGTYRSMRGGLPGED----APG-------------VLQ------------ALPFLI 260 (467)
T ss_pred -----CccCHHH-HHhcCCEEEEEeCCCCCCcCCCCCcC----CCC-------------cEE------------HHHHHH
Confidence 1122222 1246999999999976 346788832 000 000 000000
Q ss_pred CCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcC-CCc
Q psy8791 187 QPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVL-FPS 265 (706)
Q Consensus 187 ~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~-~~~ 265 (706)
.....+...... .. . .+....+ ...+.++|+. .+......+.+.|.. +|+++++.+.. ++
T Consensus 261 ~~~~~~~~~~~~---~~-~-~~~~~~g--------k~VvVIGgG~--~a~d~A~~a~~~Ga~---~Vtvv~r~~~~~~~- 321 (467)
T TIGR01318 261 ANTRQLMGLPES---PE-E-PLIDVEG--------KRVVVLGGGD--TAMDCVRTAIRLGAA---SVTCAYRRDEANMP- 321 (467)
T ss_pred HHHHHhcCCCcc---cc-c-cccccCC--------CEEEEECCcH--HHHHHHHHHHHcCCC---eEEEEEecCcccCC-
Confidence 000000000000 00 0 0000111 1122233332 122223334445532 48889876543 33
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCC-CCEE---EEEeC-----------------CCceEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLA-NKEA---VFKSE-----------------DKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~-~~~v---~~~~~-----------------~~g~~i~~D~vI~a~G~~~~ 324 (706)
.... ..+.+++.||++++++.+.++..+ ++.+ .+... ++..++++|.||+++|++|+
T Consensus 322 -~~~~-e~~~~~~~GV~~~~~~~~~~i~~~~~g~v~~v~~~~~~~~~~~~~g~~~~~~~~g~~~~i~~D~Vi~a~G~~p~ 399 (467)
T TIGR01318 322 -GSRR-EVANAREEGVEFLFNVQPVYIECDEDGRVTGVGLVRTALGEPDADGRRRPVPVAGSEFVLPADVVIMAFGFQPH 399 (467)
T ss_pred -CCHH-HHHHHHhcCCEEEecCCcEEEEECCCCeEEEEEEEEEEecccCCCCCccceecCCceEEEECCEEEECCcCCCC
Confidence 1112 234567889999999999998643 2333 22110 12347999999999999998
Q ss_pred --hhhhcCCC-CCCCCceeeCc---cccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHH
Q psy8791 325 --PELATSRL-VDQSGYVNVDK---ATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVM 387 (706)
Q Consensus 325 --~~~~~~~l-~~~~G~i~vd~---~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l 387 (706)
.++...++ .+++|++.||+ .+++ |+.|+|||+|||+.. +.+...|+.+|+.+|.+|.+.|
T Consensus 400 ~~~~~~~~gl~~~~~g~i~vd~~~~~~~~-T~~~gVfa~GD~~~~--~~~~~~Ai~~G~~aA~~i~~~L 465 (467)
T TIGR01318 400 AMPWLAGHGITLDSWGRIITGDVSYLPYQ-TTNPKIFAGGDAVRG--ADLVVTAVAEGRQAAQGILDWL 465 (467)
T ss_pred ccccccccCccCCCCCCEEeCCccccCcc-CCCCCEEEECCcCCC--ccHHHHHHHHHHHHHHHHHHHh
Confidence 34555677 67789999993 1566 789999999999875 3477889999999999998876
No 69
>PRK13984 putative oxidoreductase; Provisional
Probab=99.86 E-value=2.2e-20 Score=212.65 Aligned_cols=296 Identities=15% Similarity=0.124 Sum_probs=169.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCcccccccccccCCCcEEEEceeEE
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 107 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~v~~ 107 (706)
...++|+|||+|+||+++|..|+++ |++|+|||+++.......+ .++......+.+......+...+++++.+....
T Consensus 281 ~~~~~v~IIGaG~aGl~aA~~L~~~--G~~v~vie~~~~~gG~~~~-~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 357 (604)
T PRK13984 281 KKNKKVAIVGSGPAGLSAAYFLATM--GYEVTVYESLSKPGGVMRY-GIPSYRLPDEALDKDIAFIEALGVKIHLNTRVG 357 (604)
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCCCCceEee-cCCcccCCHHHHHHHHHHHHHCCcEEECCCEeC
Confidence 3467899999999999999999998 8999999998853221110 111111111112222334445688887654432
Q ss_pred EEcCCCEEEeCCCeEEEecEEEEccccc-cccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhc
Q psy8791 108 FDPENNRVRTQAGSEISYEYMIVASGIQ-MYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALD 186 (706)
Q Consensus 108 id~~~~~v~~~~g~~~~yd~lviAtG~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 186 (706)
.+ +..++ ....||+||+|||+. ++.+++||.+ ..
T Consensus 358 ~~-----~~~~~-~~~~yD~vilAtGa~~~r~l~i~G~~----~~----------------------------------- 392 (604)
T PRK13984 358 KD-----IPLEE-LREKHDAVFLSTGFTLGRSTRIPGTD----HP----------------------------------- 392 (604)
T ss_pred Cc-----CCHHH-HHhcCCEEEEEcCcCCCccCCCCCcC----Cc-----------------------------------
Confidence 22 11111 135799999999986 5677888831 00
Q ss_pred CCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCC--CCCcEEEEEeC--CCcC
Q psy8791 187 QPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKK--RDAAKLTYCTG--MGVL 262 (706)
Q Consensus 187 ~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~--~~~~~v~l~~~--~~~~ 262 (706)
.+.. ..+......+.+.. . +. ....+...++++|+.. +......+.+.+. ....+++++.. ....
T Consensus 393 ----gv~~--a~~~l~~~~~~~~~-~-~~-~~~~~k~VvVIGGG~~--g~e~A~~l~r~~~~~~g~~~V~v~~~~r~~~~ 461 (604)
T PRK13984 393 ----DVIQ--ALPLLREIRDYLRG-E-GP-KPKIPRSLVVIGGGNV--AMDIARSMARLQKMEYGEVNVKVTSLERTFEE 461 (604)
T ss_pred ----CeEe--HHHHHHHHHhhhcc-C-CC-cCCCCCcEEEECCchH--HHHHHHHHHhccccccCceEEEEeccccCccc
Confidence 0000 00000111111100 0 00 0001122333444432 2222233444432 11224565532 2222
Q ss_pred CCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEe-------------------CCCceEEeecEEEECCCCCc
Q psy8791 263 FPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKS-------------------EDKTERLPYAIMHVTPPMGP 323 (706)
Q Consensus 263 ~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~-------------------~~~g~~i~~D~vI~a~G~~~ 323 (706)
++ . ....+.+ +.+.||+++++..+.++..+++.+..+. .+++.++++|.||+++|+.|
T Consensus 462 ~~-~-~~~e~~~-~~~~GV~i~~~~~~~~i~~~~g~v~~v~~~~~~~~~~~~G~~~~~~~~g~~~~i~aD~Vi~aiG~~p 538 (604)
T PRK13984 462 MP-A-DMEEIEE-GLEEGVVIYPGWGPMEVVIENDKVKGVKFKKCVEVFDEEGRFNPKFDESDQIIVEADMVVEAIGQAP 538 (604)
T ss_pred CC-C-CHHHHHH-HHHcCCEEEeCCCCEEEEccCCEEEEEEEEEEeeccCCCCCccceecCCceEEEECCEEEEeeCCCC
Confidence 32 1 1222333 3467999999988888865444333211 11235799999999999999
Q ss_pred hhh-hhc---CCCCCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCC
Q psy8791 324 VPE-LAT---SRLVDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNR 390 (706)
Q Consensus 324 ~~~-~~~---~~l~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~ 390 (706)
+.. +.. .++..++|+|.||+ +++ |+.|+|||+|||+..+ ....|+.+|+.+|.+|.++|.++
T Consensus 539 ~~~~l~~~~~~~l~~~~G~i~vd~-~~~-Ts~~gVfAaGD~~~~~---~~v~Ai~~G~~AA~~I~~~L~~~ 604 (604)
T PRK13984 539 DYSYLPEELKSKLEFVRGRILTNE-YGQ-TSIPWLFAGGDIVHGP---DIIHGVADGYWAAEGIDMYLRKQ 604 (604)
T ss_pred ChhhhhhhhccCccccCCeEEeCC-CCc-cCCCCEEEecCcCCch---HHHHHHHHHHHHHHHHHHHhccC
Confidence 844 332 23433578999998 677 8999999999999864 34679999999999999998763
No 70
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=99.85 E-value=6.9e-20 Score=208.76 Aligned_cols=299 Identities=15% Similarity=0.136 Sum_probs=171.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccc-cccCccccCcccccccccccCCCcEEEEceeEE
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFT-LIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 107 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~v~~ 107 (706)
..++|+|||||+|||++|..|++. |++|+|+|+++.... .+. .++......+.+......+...++++..+....
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~--G~~Vtv~e~~~~~GG--~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~ 384 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARA--GVQVDVFDRHPEIGG--MLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIG 384 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHc--CCcEEEEeCCCCCCC--eeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccC
Confidence 468999999999999999999998 899999999985321 111 111111111111112233344688887644221
Q ss_pred EEcCCCEEEeCCCeEEEecEEEEcccccc-ccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhc
Q psy8791 108 FDPENNRVRTQAGSEISYEYMIVASGIQM-YYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALD 186 (706)
Q Consensus 108 id~~~~~v~~~~g~~~~yd~lviAtG~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 186 (706)
+.+.+.+ ....||.+++|||+.. ..+++||.+ ..|.. . .++.+.. .......
T Consensus 385 -----~~~~~~~-l~~~~DaV~latGa~~~~~~~i~g~~----~~gv~-------------~--a~~~l~~--~~~~~~~ 437 (639)
T PRK12809 385 -----RDITFSD-LTSEYDAVFIGVGTYGMMRADLPHED----APGVI-------------Q--ALPFLTA--HTRQLMG 437 (639)
T ss_pred -----CcCCHHH-HHhcCCEEEEeCCCCCCCCCCCCCCc----cCCcE-------------e--HHHHHHH--HHHhhcc
Confidence 1122222 1346999999999864 346677721 10100 0 0000000 0000000
Q ss_pred CCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcC-CCc
Q psy8791 187 QPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVL-FPS 265 (706)
Q Consensus 187 ~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~-~~~ 265 (706)
.. .. ... .+....+. ..+.++|+.. ... ....+.+.|.. +|+++.+.... ++
T Consensus 438 ~~--------~~---~~~--~~~~~~gk--------~vvViGgG~~-a~d-~a~~~~~~Ga~---~Vt~v~rr~~~~~~- 490 (639)
T PRK12809 438 LP--------ES---EEY--PLTDVEGK--------RVVVLGGGDT-TMD-CLRTSIRLNAA---SVTCAYRRDEVSMP- 490 (639)
T ss_pred Cc--------cc---ccc--ccccCCCC--------eEEEECCcHH-HHH-HHHHHHHcCCC---eEEEeeecCcccCC-
Confidence 00 00 000 00001111 1222333321 122 22233345532 48888766544 33
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCC-CCEEEEE---eC-----------------CCceEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLA-NKEAVFK---SE-----------------DKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~-~~~v~~~---~~-----------------~~g~~i~~D~vI~a~G~~~~ 324 (706)
.....+. .+++.||++++++.+.+|..+ ++.+... .. ++..++++|+||+++|+.|+
T Consensus 491 -~~~~e~~-~a~~eGv~~~~~~~~~~i~~~~~g~v~~v~~~~~~~~~~~~~g~~~~~~~~g~~~~i~aD~Vi~AiG~~p~ 568 (639)
T PRK12809 491 -GSRKEVV-NAREEGVEFQFNVQPQYIACDEDGRLTAVGLIRTAMGEPGPDGRRRPRPVAGSEFELPADVLIMAFGFQAH 568 (639)
T ss_pred -CCHHHHH-HHHHcCCeEEeccCCEEEEECCCCeEEEEEEEEEEecCcCCCCCccceecCCceEEEECCEEEECcCCCCC
Confidence 1122222 356789999999999999743 3333211 11 12247999999999999997
Q ss_pred --hhhhcCCC-CCCCCceeeCcc---ccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCC
Q psy8791 325 --PELATSRL-VDQSGYVNVDKA---TLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNR 390 (706)
Q Consensus 325 --~~~~~~~l-~~~~G~i~vd~~---~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~ 390 (706)
.++...++ ++++|++.||+. +++ |+.|+|||+|||... +.+...|+.+|+.+|.+|...|.++
T Consensus 569 ~~~~~~~~gl~~~~~G~i~vd~~~~~~~~-Ts~~gVfA~GD~~~g--~~~vv~Ai~~Gr~AA~~i~~~l~~~ 637 (639)
T PRK12809 569 AMPWLQGSGIKLDKWGLIQTGDVGYLPTQ-THLKKVFAGGDAVHG--ADLVVTAMAAGRQAARDMLTLFDTK 637 (639)
T ss_pred ccccccccCcccCCCCCEEeCCCcccCcc-cCCCCEEEcCCCCCC--chHHHHHHHHHHHHHHHHHHHHhhh
Confidence 34555677 678899999852 355 899999999999976 3477899999999999999998764
No 71
>KOG4716|consensus
Probab=99.84 E-value=4.2e-20 Score=179.91 Aligned_cols=302 Identities=16% Similarity=0.239 Sum_probs=191.1
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEc---CCCCcc-cC-----------c-------cc-----cc-cc
Q psy8791 26 SSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVE---PTDDHY-YQ-----------P-------MF-----TL-IG 77 (706)
Q Consensus 26 ~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie---~~~~~~-~~-----------p-------~~-----~~-~~ 77 (706)
..+.++|.+|||||-+||+||++.+.. |.+|.++| +.|.-. |. | ++ +. ..
T Consensus 15 ~~sydyDLIviGgGSgGLacaKeAa~~--G~kV~~lDfV~PtP~GtsWGlGGTCvNVGCIPKKLMHQAallG~al~da~k 92 (503)
T KOG4716|consen 15 FSSYDYDLIVIGGGSGGLACAKEAADL--GAKVACLDFVKPTPQGTSWGLGGTCVNVGCIPKKLMHQAALLGEALHDARK 92 (503)
T ss_pred cccCCccEEEEcCCcchhhHHHHHHhc--CCcEEEEeecccCCCCCccccCceeeecccccHHHHHHHHHHHHHHHHHHh
Confidence 455789999999999999999999999 89999988 333200 00 0 00 00 00
Q ss_pred CccccCc-cccccccccc-------------------CCCcEEEEceeEEEEcCCCEEEeCCC--eEEEecEEEEccccc
Q psy8791 78 GGMKKLS-DSRRPMKSVL-------------------PSGATWVKDKIVSFDPENNRVRTQAG--SEISYEYMIVASGIQ 135 (706)
Q Consensus 78 ~~~~~~~-~~~~~~~~~~-------------------~~~v~~i~~~v~~id~~~~~v~~~~g--~~~~yd~lviAtG~~ 135 (706)
-|+.-.+ .+.-+...+. ...++++.+--+-+|+..-..+..+| +.+.++++|||||.+
T Consensus 93 yGW~~~e~~ikhdW~~l~~sVqnhI~s~NW~yRv~LreKkV~Y~NsygeFv~~h~I~at~~~gk~~~~ta~~fvIatG~R 172 (503)
T KOG4716|consen 93 YGWNVDEQKIKHDWNKLVKSVQNHIKSLNWGYRVQLREKKVEYINSYGEFVDPHKIKATNKKGKERFLTAENFVIATGLR 172 (503)
T ss_pred hCCCCccccccccHHHHHHHHHHHhhhccceEEEEeccceeeeeecceeecccceEEEecCCCceEEeecceEEEEecCC
Confidence 0111111 1111111111 12333444333334433322333344 357899999999999
Q ss_pred cccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCC
Q psy8791 136 MYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGP 215 (706)
Q Consensus 136 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~ 215 (706)
|++|.||| +.|+....+++. . |...++..
T Consensus 173 PrYp~IpG--~~Ey~ITSDDlF----------------------------s---------------------l~~~PGkT 201 (503)
T KOG4716|consen 173 PRYPDIPG--AKEYGITSDDLF----------------------------S---------------------LPYEPGKT 201 (503)
T ss_pred CCCCCCCC--ceeeeecccccc----------------------------c---------------------ccCCCCce
Confidence 99999999 456664433221 0 11224555
Q ss_pred EEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC-chhHHHHHHHHHHhCCceEEcCCceEEEeC
Q psy8791 216 VLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP-SPFYAEKIHDILIGRGVDVHKGKALVEIDL 294 (706)
Q Consensus 216 ~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~-~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~ 294 (706)
.+++++....+|+|- |...|.. +++.-+.-.+-+ +.++.+.+.+.++++||++...+...+++.
T Consensus 202 LvVGa~YVaLECAgF-----------L~gfg~~----vtVmVRSI~LrGFDqdmae~v~~~m~~~Gikf~~~~vp~~Veq 266 (503)
T KOG4716|consen 202 LVVGAGYVALECAGF-----------LKGFGYD----VTVMVRSILLRGFDQDMAELVAEHMEERGIKFLRKTVPERVEQ 266 (503)
T ss_pred EEEccceeeeehhhh-----------HhhcCCC----cEEEEEEeecccccHHHHHHHHHHHHHhCCceeecccceeeee
Confidence 677777777888763 6666654 455444443333 789999999999999999998865555543
Q ss_pred ---CCCEEEEEeCC--CceEEeecEEEECCCCCchhh---hhcCCC-C-CCCCceeeCccccccCCCCCEEEccccCCCC
Q psy8791 295 ---ANKEAVFKSED--KTERLPYAIMHVTPPMGPVPE---LATSRL-V-DQSGYVNVDKATLQHVKYSNVFAIGDCSNLP 364 (706)
Q Consensus 295 ---~~~~v~~~~~~--~g~~i~~D~vI~a~G~~~~~~---~~~~~l-~-~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~ 364 (706)
..-.|....+. ++.+-++|+|+||+|..+..- +.+.|+ . ..+|.|.+|+. +.|+.|+|||+||+....
T Consensus 267 ~~~g~l~v~~k~t~t~~~~~~~ydTVl~AiGR~~~~~~l~L~~~GVk~n~ks~KI~v~~~--e~t~vp~vyAvGDIl~~k 344 (503)
T KOG4716|consen 267 IDDGKLRVFYKNTNTGEEGEEEYDTVLWAIGRKALTDDLNLDNAGVKTNEKSGKIPVDDE--EATNVPYVYAVGDILEDK 344 (503)
T ss_pred ccCCcEEEEeecccccccccchhhhhhhhhccccchhhcCCCccceeecccCCccccChH--HhcCCCceEEecceecCC
Confidence 22234333333 333567999999999999832 445577 3 35799999983 669999999999998763
Q ss_pred CCchHHHHHHhHHHHHHHHHHHHcCCCCCCcccceee
Q psy8791 365 TSKTAAAVAGQCKVVYDNLSAVMKNRALPHEYNGYTS 401 (706)
Q Consensus 365 ~~~~~~~a~~qg~~~a~ni~~~l~g~~~~~~~~~~~~ 401 (706)
|.+...|++.|+.+|+.+- .|..-...|.+..+
T Consensus 345 -pELTPvAIqsGrlLa~Rlf---~gs~q~~dy~~V~T 377 (503)
T KOG4716|consen 345 -PELTPVAIQSGRLLARRLF---AGSTQLMDYDDVAT 377 (503)
T ss_pred -cccchhhhhhchHHHHHHh---cCcceeeeccCCce
Confidence 5677789999999999884 34433456665433
No 72
>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]
Probab=99.84 E-value=4.9e-21 Score=199.60 Aligned_cols=168 Identities=23% Similarity=0.422 Sum_probs=130.8
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
.+++|||||||++|+.++..|.+..++.+|++||++++|.|+|.++.+..|....+.+..|++.++...
T Consensus 2 ~~~~iVIlGgGfgGl~~a~~l~~~~~~~~itLVd~~~~hl~~plL~eva~g~l~~~~i~~p~~~~~~~~----------- 70 (405)
T COG1252 2 MKKRIVILGGGFGGLSAAKRLARKLPDVEITLVDRRDYHLFTPLLYEVATGTLSESEIAIPLRALLRKS----------- 70 (405)
T ss_pred CCceEEEECCcHHHHHHHHHhhhcCCCCcEEEEeCCCccccchhhhhhhcCCCChhheeccHHHHhccc-----------
Confidence 466899999999999999999987435899999999999999999998888877777776664433321
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhccCCcEEEeceEEEEEcCCCeEEcCCCcEEeeC
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDPENNRVRTQAGSEISYE 625 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~yd 625 (706)
.+++|++++|++||+++++|++.++++++||
T Consensus 71 -------------------------------------------------~~v~~~~~~V~~ID~~~k~V~~~~~~~i~YD 101 (405)
T COG1252 71 -------------------------------------------------GNVQFVQGEVTDIDRDAKKVTLADLGEISYD 101 (405)
T ss_pred -------------------------------------------------CceEEEEEEEEEEcccCCEEEeCCCcccccc
Confidence 1589999999999999999999998899999
Q ss_pred EEEEecCcccCccCCCCchh------hhcccccccccc-cCccchhhhcc---CccEEEE-----cHHHHHHHHHHHhhh
Q psy8791 626 YMIVASGIQMYYDRVKGGTT------SLEDRGKMRGVS-DGFSTVTWEQK---HKQYQLV-----SPEIRAKAYDLTKRK 690 (706)
Q Consensus 626 ~lViAtGs~~~~p~i~G~~~------~~~~~~~~~~~~-~~~~~~~~~~~---~k~vvVi-----G~E~A~~l~~~~~~~ 690 (706)
+||||+||.+..+.+||+.+ +++++..++.++ ..++....... ...|+|+ |+|+|++|+++..+.
T Consensus 102 ~LVvalGs~~~~fgi~G~~E~a~~lks~edA~~ir~~l~~~fe~a~~~~~~~~~lti~IvGgG~TGVElAgeL~~~~~~l 181 (405)
T COG1252 102 YLVVALGSETNYFGIPGAAEYAFGLKTLEDALRLRRHLLEAFEKASQEEDDRALLTIVIVGGGPTGVELAGELAERLHRL 181 (405)
T ss_pred EEEEecCCcCCcCCCCCHHHhCCCCCCHHHHHHHHHHHHHHHHHhhccccccceeEEEEECCChhHHHHHHHHHHHHHHH
Confidence 99999999999999999764 334443433333 12222211111 1247777 999999999999877
Q ss_pred hhh
Q psy8791 691 MKK 693 (706)
Q Consensus 691 ~~~ 693 (706)
+++
T Consensus 182 ~~~ 184 (405)
T COG1252 182 LKK 184 (405)
T ss_pred hhh
Confidence 665
No 73
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=99.83 E-value=3.1e-19 Score=201.23 Aligned_cols=288 Identities=20% Similarity=0.174 Sum_probs=170.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCcccccccccccCCCcEEEEceeEE
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 107 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~v~~ 107 (706)
...++|+|||||++||++|..|++. |++|+++|+.+....... ..++......+.....+..+...++++..+....
T Consensus 135 ~~g~~V~VIGaGpaGL~aA~~l~~~--G~~V~v~e~~~~~GG~l~-~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 135 DTGKRVAVIGGGPAGLSAAYHLRRM--GHAVTIFEAGPKLGGMMR-YGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCCCCCeee-ecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 3457899999999999999999998 899999999886432110 0111111111112222333444677776543221
Q ss_pred EEcCCCEEEeCCCeEEEecEEEEcccccc-ccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhc
Q psy8791 108 FDPENNRVRTQAGSEISYEYMIVASGIQM-YYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALD 186 (706)
Q Consensus 108 id~~~~~v~~~~g~~~~yd~lviAtG~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 186 (706)
.+... .+ ....||++++|+|+.. ....++|.+ ..
T Consensus 212 ~~~~~-----~~-~~~~~D~Vi~AtG~~~~~~~~i~g~~----~~----------------------------------- 246 (564)
T PRK12771 212 EDITL-----EQ-LEGEFDAVFVAIGAQLGKRLPIPGED----AA----------------------------------- 246 (564)
T ss_pred CcCCH-----HH-HHhhCCEEEEeeCCCCCCcCCCCCCc----cC-----------------------------------
Confidence 11111 00 1125899999999864 344566621 00
Q ss_pred CCCCCcccCCChhHHHHHHHHHH----hccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcC
Q psy8791 187 QPDSGVSTNYSPQYVEKTLRNLQ----HFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVL 262 (706)
Q Consensus 187 ~~~~~v~~~~~~~~~~~~~~~l~----~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~ 262 (706)
.+.. . ..+..... ...++++ +.++|+.. +......+.+.+.. .++++++.+..
T Consensus 247 ----gv~~---~---~~~l~~~~~~~~~~~gk~v--------~ViGgg~~--a~d~a~~a~~lga~---~v~ii~r~~~~ 303 (564)
T PRK12771 247 ----GVLD---A---VDFLRAVGEGEPPFLGKRV--------VVIGGGNT--AMDAARTARRLGAE---EVTIVYRRTRE 303 (564)
T ss_pred ----CcEE---H---HHHHHHhhccCCcCCCCCE--------EEECChHH--HHHHHHHHHHcCCC---EEEEEEecCcc
Confidence 0000 0 00011110 1112222 22333322 11122234444422 36777665432
Q ss_pred -CCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCC-EE--E---EEe------------CCCceEEeecEEEECCCCCc
Q psy8791 263 -FPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANK-EA--V---FKS------------EDKTERLPYAIMHVTPPMGP 323 (706)
Q Consensus 263 -~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~-~v--~---~~~------------~~~g~~i~~D~vI~a~G~~~ 323 (706)
++ .....+. .+.+.||+++++..+.++..+++ .+ . ... .++..++++|+||+++|+.|
T Consensus 304 ~~~--~~~~~~~-~a~~~GVki~~~~~~~~i~~~~~~~~~v~~~~~~~~~~~~~g~~~~~~g~~~~i~~D~Vi~A~G~~p 380 (564)
T PRK12771 304 DMP--AHDEEIE-EALREGVEINWLRTPVEIEGDENGATGLRVITVEKMELDEDGRPSPVTGEEETLEADLVVLAIGQDI 380 (564)
T ss_pred cCC--CCHHHHH-HHHHcCCEEEecCCcEEEEcCCCCEEEEEEEEEEecccCCCCCeeecCCceEEEECCEEEECcCCCC
Confidence 22 2222333 34568999999999999976542 21 1 111 11224799999999999999
Q ss_pred h-hhhhc-CCCCCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCCCC
Q psy8791 324 V-PELAT-SRLVDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNRAL 392 (706)
Q Consensus 324 ~-~~~~~-~~l~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~~~ 392 (706)
+ +++.+ .++.+++|++.||+. .+.|+.|+|||+|||+.. +++...|+.||+.+|.+|.+.+.|++.
T Consensus 381 ~~~~~~~~~gl~~~~G~i~vd~~-~~~ts~~~Vfa~GD~~~g--~~~v~~Av~~G~~aA~~i~~~L~g~~~ 448 (564)
T PRK12771 381 DSAGLESVPGVEVGRGVVQVDPN-FMMTGRPGVFAGGDMVPG--PRTVTTAIGHGKKAARNIDAFLGGEPY 448 (564)
T ss_pred chhhhhhccCcccCCCCEEeCCC-CccCCCCCEEeccCcCCC--chHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 8 45554 466677899999984 455999999999999875 458889999999999999999998764
No 74
>TIGR01372 soxA sarcosine oxidase, alpha subunit family, heterotetrameric form. This model describes the alpha subunit of a family of known and putative heterotetrameric sarcosine oxidases. Five operons of such oxidases are found in Mesorhizobium loti and three in Agrobacterium tumefaciens, a high enough copy number to suggest that not all members are share the same function. The model is designated as subfamily rather than equivalog for this reason.Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms
Probab=99.80 E-value=2.3e-17 Score=196.20 Aligned_cols=284 Identities=14% Similarity=0.088 Sum_probs=173.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCccccc-ccCccccCccc-ccccccccCC-CcEEEE-cee
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTL-IGGGMKKLSDS-RRPMKSVLPS-GATWVK-DKI 105 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~-~~~~~~~~~~~-~~~~~~~~~~-~v~~i~-~~v 105 (706)
.++|+|||||+|||+||..|++. +++|+|||+++....+..... ...+ .+...+ .....++... ++++.. .+|
T Consensus 163 ~~dVvIIGaGPAGLaAA~~aar~--G~~V~liD~~~~~GG~~~~~~~~~~g-~~~~~~~~~~~~~l~~~~~v~v~~~t~V 239 (985)
T TIGR01372 163 HCDVLVVGAGPAGLAAALAAARA--GARVILVDEQPEAGGSLLSEAETIDG-KPAADWAAATVAELTAMPEVTLLPRTTA 239 (985)
T ss_pred cCCEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCCCCCeeeccccccCC-ccHHHHHHHHHHHHhcCCCcEEEcCCEE
Confidence 57999999999999999999998 999999999876332211110 0000 111111 1112233333 577765 677
Q ss_pred EEEEcCCCEEEe-----------C-----CCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCc
Q psy8791 106 VSFDPENNRVRT-----------Q-----AGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPR 169 (706)
Q Consensus 106 ~~id~~~~~v~~-----------~-----~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (706)
..++..+..... . ...++.||.||||||+.+..+++||.+
T Consensus 240 ~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~i~a~~VILATGa~~r~~pipG~~------------------------ 295 (985)
T TIGR01372 240 FGYYDHNTVGALERVTDHLDAPPKGVPRERLWRIRAKRVVLATGAHERPLVFANND------------------------ 295 (985)
T ss_pred EEEecCCeEEEEEEeeeccccccCCccccceEEEEcCEEEEcCCCCCcCCCCCCCC------------------------
Confidence 777653321111 0 012689999999999999988899832
Q ss_pred cccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCC
Q psy8791 170 RTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRD 249 (706)
Q Consensus 170 ~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~ 249 (706)
+ + .+.. ...+....+......+.++ +.+++++. ++.....+.+.|..
T Consensus 296 -----------~------p--gV~~---~~~~~~~l~~~~~~~gk~V--------vViG~G~~--g~e~A~~L~~~G~~- 342 (985)
T TIGR01372 296 -----------R------P--GVML---AGAARTYLNRYGVAPGKRI--------VVATNNDS--AYRAAADLLAAGIA- 342 (985)
T ss_pred -----------C------C--CcEE---chHHHHHHHhhCcCCCCeE--------EEECCCHH--HHHHHHHHHHcCCc-
Confidence 0 0 1111 1111111111111122222 22344432 33444556666643
Q ss_pred CcEEEEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCC--EEEEEe-CCCceEEeecEEEECCCCCchhh
Q psy8791 250 AAKLTYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANK--EAVFKS-EDKTERLPYAIMHVTPPMGPVPE 326 (706)
Q Consensus 250 ~~~v~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~--~v~~~~-~~~g~~i~~D~vI~a~G~~~~~~ 326 (706)
.+++++..+.+ ...+.+.|++.||++++++.+.++..++. .+.+.. .++++++++|.|++++|.+|+..
T Consensus 343 --vV~vv~~~~~~------~~~l~~~L~~~GV~i~~~~~v~~i~g~~~v~~V~l~~~~g~~~~i~~D~V~va~G~~Pnt~ 414 (985)
T TIGR01372 343 --VVAIIDARADV------SPEARAEARELGIEVLTGHVVAATEGGKRVSGVAVARNGGAGQRLEADALAVSGGWTPVVH 414 (985)
T ss_pred --eEEEEccCcch------hHHHHHHHHHcCCEEEcCCeEEEEecCCcEEEEEEEecCCceEEEECCEEEEcCCcCchhH
Confidence 37777766433 34567788999999999999999987653 234432 23567899999999999999965
Q ss_pred hh-cCCCCCCCCceeeCcc---ccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcC
Q psy8791 327 LA-TSRLVDQSGYVNVDKA---TLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKN 389 (706)
Q Consensus 327 ~~-~~~l~~~~G~i~vd~~---~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g 389 (706)
+. .++. .+..|+. ....|+.|+||++|||+... .+..|..+|+.+|..|+..+..
T Consensus 415 L~~~lg~-----~~~~~~~~~~~~~~t~v~gVyaaGD~~g~~---~~~~A~~eG~~Aa~~i~~~lg~ 473 (985)
T TIGR01372 415 LFSQRGG-----KLAWDAAIAAFLPGDAVQGCILAGAANGLF---GLAAALADGAAAGAAAARAAGF 473 (985)
T ss_pred HHHhcCC-----CeeeccccCceecCCCCCCeEEeeccCCcc---CHHHHHHHHHHHHHHHHHHcCC
Confidence 54 3443 1111110 11236789999999999653 5667999999999999888754
No 75
>KOG1346|consensus
Probab=99.80 E-value=1.7e-18 Score=172.91 Aligned_cols=318 Identities=17% Similarity=0.189 Sum_probs=202.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-cccc-c-ccCccc--------------------cCcccc
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-PMFT-L-IGGGMK--------------------KLSDSR 87 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-p~~~-~-~~~~~~--------------------~~~~~~ 87 (706)
...+|||||.+..+++..++....+..|.+|...+...|. |-+. . +..+.. .++.+.
T Consensus 179 vp~liigggtaAfaa~rai~s~da~A~vl~iseepelPYmRPPLSKELW~~~dpn~~k~lrfkqwsGkeRsiffepd~Ff 258 (659)
T KOG1346|consen 179 VPYLIIGGGTAAFAAFRAIKSNDATAKVLMISEEPELPYMRPPLSKELWWYGDPNSAKKLRFKQWSGKERSIFFEPDGFF 258 (659)
T ss_pred CceeEEcCCchhhhcccccccCCCCceEEeeccCccCcccCCCcchhceecCCCChhhheeecccCCccceeEecCCcce
Confidence 4589999999999888888777678899999888775554 2221 0 110100 011111
Q ss_pred cccccc---cCCCcEEEEc-eeEEEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCccccccccccccccccccc
Q psy8791 88 RPMKSV---LPSGATWVKD-KIVSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTF 163 (706)
Q Consensus 88 ~~~~~~---~~~~v~~i~~-~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 163 (706)
..-.++ ..-++-+.++ +|+.||...+.|.++||.++.||.+.||||.+|.....-. -|
T Consensus 259 vspeDLp~~~nGGvAvl~G~kvvkid~~d~~V~LnDG~~I~YdkcLIATG~~Pk~l~~~~-----~A------------- 320 (659)
T KOG1346|consen 259 VSPEDLPKAVNGGVAVLRGRKVVKIDEEDKKVILNDGTTIGYDKCLIATGVRPKKLQVFE-----EA------------- 320 (659)
T ss_pred eChhHCcccccCceEEEeccceEEeecccCeEEecCCcEeehhheeeecCcCcccchhhh-----hc-------------
Confidence 111111 1245666664 8889999999999999999999999999999986533211 00
Q ss_pred CccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChh---HHHHHHHHH
Q psy8791 164 PLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAP---MKAVLIGDE 240 (706)
Q Consensus 164 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~---~~~~~~~~~ 240 (706)
-.+..+ .+..+..+.++..+.+-+..- .. |.+.|+. .|+++.+..
T Consensus 321 -----------------~~evk~----kit~fr~p~DF~rlek~~aek-~s----------iTIiGnGflgSELacsl~r 368 (659)
T KOG1346|consen 321 -----------------SEEVKQ----KITYFRYPADFKRLEKGLAEK-QS----------ITIIGNGFLGSELACSLKR 368 (659)
T ss_pred -----------------CHHhhh----heeEEecchHHHHHHHhhhhc-ce----------EEEEcCcchhhhHHHHHHH
Confidence 000000 111112233333333333322 11 2222332 355555544
Q ss_pred HHHHcCCCCCcEEEEEeCCCcCCC---chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEE
Q psy8791 241 YLRKHKKRDAAKLTYCTGMGVLFP---SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHV 317 (706)
Q Consensus 241 ~l~~~g~~~~~~v~l~~~~~~~~~---~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~ 317 (706)
..+..| .+|+-+......+. ++.+++.-.+.+++.||+++.+..|.++....+.+.+ .++||.++..|+||.
T Consensus 369 k~r~~g----~eV~QvF~Ek~nm~kiLPeyls~wt~ekir~~GV~V~pna~v~sv~~~~~nl~l-kL~dG~~l~tD~vVv 443 (659)
T KOG1346|consen 369 KYRNEG----VEVHQVFEEKYNMEKILPEYLSQWTIEKIRKGGVDVRPNAKVESVRKCCKNLVL-KLSDGSELRTDLVVV 443 (659)
T ss_pred hhhccC----cEEEEeecccCChhhhhHHHHHHHHHHHHHhcCceeccchhhhhhhhhccceEE-EecCCCeeeeeeEEE
Confidence 444333 34555544433332 4677888888999999999999999988766555655 366999999999999
Q ss_pred CCCCCchhhhh-cCCC-CCC-CCceeeCccccccCCCCCEEEccccCCCCCCchH-------HHHHHhHHHHHHHHHHHH
Q psy8791 318 TPPMGPVPELA-TSRL-VDQ-SGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTA-------AAVAGQCKVVYDNLSAVM 387 (706)
Q Consensus 318 a~G~~~~~~~~-~~~l-~~~-~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~-------~~a~~qg~~~a~ni~~~l 387 (706)
|+|..||..+. .+|| .|+ -|.++||. .|+. ..|||++||++.+.++.++ .+|.-.|+.+.+|+
T Consensus 444 avG~ePN~ela~~sgLeiD~~lGGfrvna-eL~a--r~NvwvAGdaacF~D~~LGrRRVehhdhavvSGRLAGENM---- 516 (659)
T KOG1346|consen 444 AVGEEPNSELAEASGLEIDEKLGGFRVNA-ELKA--RENVWVAGDAACFEDGVLGRRRVEHHDHAVVSGRLAGENM---- 516 (659)
T ss_pred EecCCCchhhcccccceeecccCcEEeeh-eeec--ccceeeecchhhhhcccccceeccccccceeeceeccccc----
Confidence 99999996555 4678 554 48899998 6764 6899999999998776543 36778899999998
Q ss_pred cCCCCCCcccceeeEEEEecCCeEE
Q psy8791 388 KNRALPHEYNGYTSCPLVTGYSKCV 412 (706)
Q Consensus 388 ~g~~~~~~~~~~~~~~~~~G~~~~~ 412 (706)
.|...++.. .+.....+|+..+.
T Consensus 517 tgAakpy~h--qsmFWsdlgP~igy 539 (659)
T KOG1346|consen 517 TGAAKPYKH--QSMFWSDLGPEIGY 539 (659)
T ss_pred ccccCCccc--cceeeeccCccccc
Confidence 454443333 33445567766544
No 76
>PLN02852 ferredoxin-NADP+ reductase
Probab=99.78 E-value=1.2e-17 Score=181.04 Aligned_cols=108 Identities=10% Similarity=0.065 Sum_probs=78.1
Q ss_pred CCceEEcCCceEEEeC--CC-CE---EEEEeC----------------CCceEEeecEEEECCCCC--chhh--hhc-CC
Q psy8791 279 RGVDVHKGKALVEIDL--AN-KE---AVFKSE----------------DKTERLPYAIMHVTPPMG--PVPE--LAT-SR 331 (706)
Q Consensus 279 ~gV~v~~~~~v~~i~~--~~-~~---v~~~~~----------------~~g~~i~~D~vI~a~G~~--~~~~--~~~-~~ 331 (706)
++|.+++.....+|.. ++ +. +.+... ++.+++++|.||.+.|++ |.+. +.. .+
T Consensus 288 ~~v~~~f~~sP~ei~~~~~~~~~v~~l~~~~~~l~~~~~~g~~~~~~tge~~~i~~D~Vi~aIG~~~~p~~~l~f~~~~g 367 (491)
T PLN02852 288 RELHFVFFRNPTRFLDSGDGNGHVAGVKLERTVLEGAAGSGKQVAVGTGEFEDLPCGLVLKSIGYKSLPVDGLPFDHKRG 367 (491)
T ss_pred ceEEEEccCCCeEEEccCCCCCcEEEEEEEEeecCCCcccCCcccCCCCCEEEEECCEEEEeecCCCCCCCCCccccCcC
Confidence 5789998888888863 11 22 223211 122468999999999998 4432 222 34
Q ss_pred C-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcC
Q psy8791 332 L-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKN 389 (706)
Q Consensus 332 l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g 389 (706)
+ .+.+|+|.+|+ ..+ |+.|+|||+|||...|. .....+..+|..+|.+|..++..
T Consensus 368 v~~n~~G~V~~d~-~~~-T~ipGvyAaGDi~~Gp~-gvI~t~~~dA~~ta~~i~~d~~~ 423 (491)
T PLN02852 368 VVPNVHGRVLSSA-SGA-DTEPGLYVVGWLKRGPT-GIIGTNLTCAEETVASIAEDLEQ 423 (491)
T ss_pred eeECCCceEEeCC-CCc-cCCCCEEEeeeEecCCC-CeeeecHhhHHHHHHHHHHHHHc
Confidence 4 67889999997 455 88999999999998754 35567889999999999998765
No 77
>KOG0404|consensus
Probab=99.78 E-value=8.7e-18 Score=154.75 Aligned_cols=292 Identities=14% Similarity=0.154 Sum_probs=180.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCc-----------ccccccCccccCcccccccccccCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQP-----------MFTLIGGGMKKLSDSRRPMKSVLPSG 97 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p-----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (706)
.+.+|+|||+|+|+-.||.+++|. ..+-+|+|-.-...-.| .+|.++.+...++....-.++-.+++
T Consensus 7 h~e~v~IiGSGPAa~tAAiYaara--elkPllfEG~~~~~i~pGGQLtTTT~veNfPGFPdgi~G~~l~d~mrkqs~r~G 84 (322)
T KOG0404|consen 7 HNENVVIIGSGPAAHTAAIYAARA--ELKPLLFEGMMANGIAPGGQLTTTTDVENFPGFPDGITGPELMDKMRKQSERFG 84 (322)
T ss_pred eeeeEEEEccCchHHHHHHHHhhc--ccCceEEeeeeccCcCCCceeeeeeccccCCCCCcccccHHHHHHHHHHHHhhc
Confidence 345899999999999999999998 67778887422111111 12223333333332222223334578
Q ss_pred cEEEEceeEEEEcCCCEE-EeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCcccccccc
Q psy8791 98 ATWVKDKIVSFDPENNRV-RTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLR 176 (706)
Q Consensus 98 v~~i~~~v~~id~~~~~v-~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (706)
.+++..+|.++|...+-. ...+.+.+..|.+|+|||+..+...+||.-
T Consensus 85 t~i~tEtVskv~~sskpF~l~td~~~v~~~avI~atGAsAkRl~~pg~g------------------------------- 133 (322)
T KOG0404|consen 85 TEIITETVSKVDLSSKPFKLWTDARPVTADAVILATGASAKRLHLPGEG------------------------------- 133 (322)
T ss_pred ceeeeeehhhccccCCCeEEEecCCceeeeeEEEecccceeeeecCCCC-------------------------------
Confidence 899999999999887732 223445899999999999998888888820
Q ss_pred CccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCe-eeCChhHHHHHHHHHHHHHcCCCCCcEEEE
Q psy8791 177 RPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPI-KCGGAPMKAVLIGDEYLRKHKKRDAAKLTY 255 (706)
Q Consensus 177 ~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v-~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l 255 (706)
-.++|+. +-..|.+++.- .- -| .+.+. +++|+ . .++.-+.+|.+.+. +|++
T Consensus 134 ----e~~fWqr-GiSaCAVCDGa--ap------if---------rnk~laVIGGG-D-sA~EEA~fLtkyas----kVyi 185 (322)
T KOG0404|consen 134 ----EGEFWQR-GISACAVCDGA--AP------IF---------RNKPLAVIGGG-D-SAMEEALFLTKYAS----KVYI 185 (322)
T ss_pred ----cchHHhc-ccchhhcccCc--ch------hh---------cCCeeEEEcCc-H-HHHHHHHHHHhhcc----EEEE
Confidence 0111111 10122222211 00 01 12222 34444 2 23334456777764 4999
Q ss_pred EeCCCcCCCchhHHHHHHHH-HHhCCceEEcCCceEEEeCCCCE-----EEEEeCCCceEEeecEEEECCCCCchhhhhc
Q psy8791 256 CTGMGVLFPSPFYAEKIHDI-LIGRGVDVHKGKALVEIDLANKE-----AVFKSEDKTERLPYAIMHVTPPMGPVPELAT 329 (706)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~-l~~~gV~v~~~~~v~~i~~~~~~-----v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~ 329 (706)
+++.+.+- .+..+++. ++..+|+++.++.+.+...+++. +.-+.+.+.+.++.+-+++++|..|++.+.+
T Consensus 186 i~Rrd~fR----As~~Mq~ra~~npnI~v~~nt~~~ea~gd~~~l~~l~ikn~~tge~~dl~v~GlFf~IGH~Pat~~l~ 261 (322)
T KOG0404|consen 186 IHRRDHFR----ASKIMQQRAEKNPNIEVLYNTVAVEALGDGKLLNGLRIKNVKTGEETDLPVSGLFFAIGHSPATKFLK 261 (322)
T ss_pred EEEhhhhh----HHHHHHHHHhcCCCeEEEechhhhhhccCcccccceEEEecccCcccccccceeEEEecCCchhhHhc
Confidence 99887653 34444444 45579999999988887766432 2223333556799999999999999976666
Q ss_pred CCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHH
Q psy8791 330 SRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVM 387 (706)
Q Consensus 330 ~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l 387 (706)
..+ +|++|+|.+.+- -..|+.|++||+||+..... ..+..|...|-.+|....++|
T Consensus 262 gqve~d~~GYi~t~pg-ts~TsvpG~FAAGDVqD~ky-RQAvTaAgsGciaaldAe~yL 318 (322)
T KOG0404|consen 262 GQVELDEDGYIVTRPG-TSLTSVPGVFAAGDVQDKKY-RQAVTAAGSGCIAALDAERYL 318 (322)
T ss_pred CceeeccCceEEeccC-cccccccceeeccccchHHH-HHHHhhhccchhhhhhHHHHh
Confidence 566 899999999873 34599999999999887532 123333344444444443333
No 78
>PTZ00318 NADH dehydrogenase-like protein; Provisional
Probab=99.77 E-value=5.9e-19 Score=192.23 Aligned_cols=168 Identities=15% Similarity=0.260 Sum_probs=119.3
Q ss_pred ccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccc
Q psy8791 464 FRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIV 543 (706)
Q Consensus 464 ~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~ 543 (706)
.+++++|||||||+||+.+|++|.+. +.+|+|||+++++.|.|+++.+..|......+
T Consensus 7 ~~~~~~vVIvGgG~aGl~~a~~L~~~--~~~ItlI~~~~~~~~~~~l~~~~~g~~~~~~~-------------------- 64 (424)
T PTZ00318 7 RLKKPNVVVLGTGWAGAYFVRNLDPK--KYNITVISPRNHMLFTPLLPQTTTGTLEFRSI-------------------- 64 (424)
T ss_pred CCCCCeEEEECCCHHHHHHHHHhCcC--CCeEEEEcCCCCcchhhhHHHhcccCCChHHh--------------------
Confidence 44577999999999999999998643 68999999999999888776555543332222
Q ss_pred ccCCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEc------
Q psy8791 544 SFDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRT------ 616 (706)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~------ 616 (706)
..++...+. .+++|+.++|++||+++++|++
T Consensus 65 ------------------------------------------~~~~~~~~~~~~~~~i~~~V~~Id~~~~~v~~~~~~~~ 102 (424)
T PTZ00318 65 ------------------------------------------CEPVRPALAKLPNRYLRAVVYDVDFEEKRVKCGVVSKS 102 (424)
T ss_pred ------------------------------------------HHHHHHHhccCCeEEEEEEEEEEEcCCCEEEEeccccc
Confidence 223333333 4789999999999999999987
Q ss_pred ----CCCcEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchh----------h-------hccCccEEEE
Q psy8791 617 ----QAGSEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVT----------W-------EQKHKQYQLV 675 (706)
Q Consensus 617 ----~~g~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~----------~-------~~~~k~vvVi 675 (706)
++|.+++||+||||||+++..|++||..+. +..++...+...... . ....++++||
T Consensus 103 ~~~~~~g~~i~yD~LViAtGs~~~~~~ipG~~e~---~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVv 179 (424)
T PTZ00318 103 NNANVNTFSVPYDKLVVAHGARPNTFNIPGVEER---AFFLKEVNHARGIRKRIVQCIERASLPTTSVEERKRLLHFVVV 179 (424)
T ss_pred ccccCCceEecCCEEEECCCcccCCCCCCCHHHc---CCCCCCHHHHHHHHHHHHHHHHHhcCCCCChHHHhccCEEEEE
Confidence 467789999999999999999999997642 112222221111000 0 0112478888
Q ss_pred -----cHHHHHHHHHHHhhhhhhhcccc
Q psy8791 676 -----SPEIRAKAYDLTKRKMKKEAQWI 698 (706)
Q Consensus 676 -----G~E~A~~l~~~~~~~~~~~~~~~ 698 (706)
|+|+|.+|+++.++..++.++.+
T Consensus 180 GgG~~GvE~A~~l~~~~~~~~~~~~~~~ 207 (424)
T PTZ00318 180 GGGPTGVEFAAELADFFRDDVRNLNPEL 207 (424)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999998876665555544
No 79
>COG3634 AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones]
Probab=99.72 E-value=3.9e-17 Score=159.93 Aligned_cols=284 Identities=17% Similarity=0.154 Sum_probs=170.4
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcc----cccccCccccC-cccccccc-cccCCCcE
Q psy8791 26 SSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPM----FTLIGGGMKKL-SDSRRPMK-SVLPSGAT 99 (706)
Q Consensus 26 ~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~----~~~~~~~~~~~-~~~~~~~~-~~~~~~v~ 99 (706)
.....++|+|||||+||.+||.+.+|+ |.+.-|+-.+ |..+.+ ...+.+-.... ..+...++ ++..+.++
T Consensus 207 ~~k~~yDVLvVGgGPAgaaAAiYaARK--GiRTGl~aer--fGGQvldT~~IENfIsv~~teGpkl~~ale~Hv~~Y~vD 282 (520)
T COG3634 207 NAKDAYDVLVVGGGPAGAAAAIYAARK--GIRTGLVAER--FGGQVLDTMGIENFISVPETEGPKLAAALEAHVKQYDVD 282 (520)
T ss_pred hccCCceEEEEcCCcchhHHHHHHHhh--cchhhhhhhh--hCCeeccccchhheeccccccchHHHHHHHHHHhhcCch
Confidence 445678999999999999999999998 6544433211 122211 00000000000 00111111 12224555
Q ss_pred EEE-ceeEEEEcC-----CCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccc
Q psy8791 100 WVK-DKIVSFDPE-----NNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLD 173 (706)
Q Consensus 100 ~i~-~~v~~id~~-----~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (706)
.+. .+++++.+. ...|++.+|..+..+.+|++||++++..++||-
T Consensus 283 imn~qra~~l~~a~~~~~l~ev~l~nGavLkaktvIlstGArWRn~nvPGE----------------------------- 333 (520)
T COG3634 283 VMNLQRASKLEPAAVEGGLIEVELANGAVLKARTVILATGARWRNMNVPGE----------------------------- 333 (520)
T ss_pred hhhhhhhhcceecCCCCccEEEEecCCceeccceEEEecCcchhcCCCCch-----------------------------
Confidence 554 355555552 337899999999999999999999999999992
Q ss_pred cccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCE-EEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcE
Q psy8791 174 FLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPV-LYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAK 252 (706)
Q Consensus 174 ~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~-vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~ 252 (706)
++.-. +.+..+..++.- -|++.++ |++.|+++++. +.-.+ |+- ..
T Consensus 334 --------~e~rn---KGVayCPHCDGP--------LF~gK~VAVIGGGNSGvEA-------AIDLA------Giv--~h 379 (520)
T COG3634 334 --------DEYRN---KGVAYCPHCDGP--------LFKGKRVAVIGGGNSGVEA-------AIDLA------GIV--EH 379 (520)
T ss_pred --------HHHhh---CCeeeCCCCCCc--------ccCCceEEEECCCcchHHH-------HHhHH------hhh--he
Confidence 11111 133333222221 1333333 34444444331 11111 110 13
Q ss_pred EEEEeCCCcCCCchhHHHHHHHHHHh-CCceEEcCCceEEEeCCCCEE---EEEeCCCceE--EeecEEEECCCCCch-h
Q psy8791 253 LTYCTGMGVLFPSPFYAEKIHDILIG-RGVDVHKGKALVEIDLANKEA---VFKSEDKTER--LPYAIMHVTPPMGPV-P 325 (706)
Q Consensus 253 v~l~~~~~~~~~~~~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~~v---~~~~~~~g~~--i~~D~vI~a~G~~~~-~ 325 (706)
|++++-.+.+- .-+.+++.|+. .+|+++++..-++|..++.+| .+..-++|++ ++-+-|++-+|..|| .
T Consensus 380 VtllEF~~eLk----AD~VLq~kl~sl~Nv~ii~na~Ttei~Gdg~kV~Gl~Y~dr~sge~~~l~LeGvFVqIGL~PNT~ 455 (520)
T COG3634 380 VTLLEFAPELK----ADAVLQDKLRSLPNVTIITNAQTTEVKGDGDKVTGLEYRDRVSGEEHHLELEGVFVQIGLLPNTE 455 (520)
T ss_pred eeeeecchhhh----hHHHHHHHHhcCCCcEEEecceeeEEecCCceecceEEEeccCCceeEEEeeeeEEEEecccChh
Confidence 78877665543 34455666665 699999999999999886554 3333345554 556669999999999 6
Q ss_pred hhhcCCCCCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHH
Q psy8791 326 ELATSRLVDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNL 383 (706)
Q Consensus 326 ~~~~~~l~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni 383 (706)
|++.+=-++++|-|.||.. ..|+.|+|||+|||...+.. ....++..|..++-+.
T Consensus 456 WLkg~vel~~rGEIivD~~--g~TsvpGvFAAGD~T~~~yK-QIIIamG~GA~AaL~A 510 (520)
T COG3634 456 WLKGAVELNRRGEIIVDAR--GETNVPGVFAAGDCTTVPYK-QIIIAMGEGAKASLSA 510 (520)
T ss_pred HhhchhhcCcCccEEEecC--CCcCCCceeecCcccCCccc-eEEEEecCcchhhhhh
Confidence 7776623889999999984 56999999999999998753 3333444454444443
No 80
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein. Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.
Probab=99.69 E-value=4e-17 Score=175.08 Aligned_cols=155 Identities=18% Similarity=0.297 Sum_probs=109.9
Q ss_pred cccccCcchhHHHHHHHHHhh-cCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccCC
Q psy8791 469 HLGVVGGGAAGCSMAAKFTSR-LGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDS 547 (706)
Q Consensus 469 ~ivIIGaG~aG~~~a~~l~~~-~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 547 (706)
+|||||||+||+.+|.+++++ .++.+|+|||+++++.|.+.++.+..|..
T Consensus 1 ~vvIiGgG~aG~~~a~~l~~~~~~~~~I~li~~~~~~~~~~~~~~~~~g~~----------------------------- 51 (364)
T TIGR03169 1 HLVLIGGGHTHALVLRRWAMKPLPGVRVTLINPSSTTPYSGMLPGMIAGHY----------------------------- 51 (364)
T ss_pred CEEEECCcHHHHHHHHHhcCcCCCCCEEEEECCCCCCcccchhhHHHheeC-----------------------------
Confidence 589999999999999999765 45789999999998887775433222211
Q ss_pred CceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCcEEeeCE
Q psy8791 548 SYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGSEISYEY 626 (706)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~~i~yd~ 626 (706)
..+++..++.++++ .|++|+.++|++||+++++|.+++|++++||+
T Consensus 52 ---------------------------------~~~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~~~yD~ 98 (364)
T TIGR03169 52 ---------------------------------SLDEIRIDLRRLARQAGARFVIAEATGIDPDRRKVLLANRPPLSYDV 98 (364)
T ss_pred ---------------------------------CHHHhcccHHHHHHhcCCEEEEEEEEEEecccCEEEECCCCcccccE
Confidence 11222333444443 58999999999999999999999999999999
Q ss_pred EEEecCcccCccCCCCchhhhcccccccccccCcc----chh-h--hccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 627 MIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFS----TVT-W--EQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 627 lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~----~~~-~--~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
||||||+++..|++||..+.. ..++...+... ... . ....++|+|| |+|+|..|++..+
T Consensus 99 LviAtG~~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~E~A~~l~~~~~ 169 (364)
T TIGR03169 99 LSLDVGSTTPLSGVEGAADLA---VPVKPIENFLARWEALLESADAPPGTKRLAVVGGGAAGVEIALALRRRLP 169 (364)
T ss_pred EEEccCCCCCCCCCCcccccc---cccCCHHHHHHHHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHHHHHH
Confidence 999999999999999954321 11111111111 000 1 1235689999 9999999987653
No 81
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Probab=99.67 E-value=2.3e-16 Score=170.62 Aligned_cols=160 Identities=16% Similarity=0.137 Sum_probs=106.8
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCc-ceEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQP-MFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~-~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
+..+|||||||+||++||..|+++.++.+|+||++++++.|.. .+. +.++..
T Consensus 2 ~~~~vvIIGgG~AG~~aA~~Lr~~~~~~~I~li~~e~~~~y~r~~l~----------------~~~~~~----------- 54 (396)
T PRK09754 2 KEKTIIIVGGGQAAAMAAASLRQQGFTGELHLFSDERHLPYERPPLS----------------KSMLLE----------- 54 (396)
T ss_pred CcCcEEEECChHHHHHHHHHHHhhCCCCCEEEeCCCCCCCCCCCCCC----------------HHHHCC-----------
Confidence 4568999999999999999999987778999999988776532 110 000000
Q ss_pred cCCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhccCCcEEEec-eEEEEEcCCCeEEcCCCcEEe
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKD-KIVSFDPENNRVRTQAGSEIS 623 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~id~~~~~V~~~~g~~i~ 623 (706)
.... .....+...+.+.+|+++.+ +|.+||+++++|.+++|+++.
T Consensus 55 ---------------------------------~~~~-~~~~~~~~~~~~~~i~~~~g~~V~~id~~~~~v~~~~g~~~~ 100 (396)
T PRK09754 55 ---------------------------------DSPQ-LQQVLPANWWQENNVHLHSGVTIKTLGRDTRELVLTNGESWH 100 (396)
T ss_pred ---------------------------------CCcc-ccccCCHHHHHHCCCEEEcCCEEEEEECCCCEEEECCCCEEE
Confidence 0000 00011122233468999765 699999999999999999999
Q ss_pred eCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 624 YEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 624 yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
||+||||||++|+.+++++.. .+.+..++...+..........+++++|| |+|+|..|+++..
T Consensus 101 yd~LViATGs~~~~~p~~~~~--~~~v~~~~~~~da~~l~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~ 168 (396)
T PRK09754 101 WDQLFIATGAAARPLPLLDAL--GERCFTLRHAGDAARLREVLQPERSVVIVGAGTIGLELAASATQRRC 168 (396)
T ss_pred cCEEEEccCCCCCCCCCCCcC--CCCEEecCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 999999999999877776643 22233333222222222222356889999 9999999876543
No 82
>KOG3851|consensus
Probab=99.67 E-value=3.6e-17 Score=158.53 Aligned_cols=124 Identities=52% Similarity=0.981 Sum_probs=108.7
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
+++++|+|||||.+|+.+|.++.++.+..+|.|||+.++|+|+|+|+.++||...+...+.+..+|++.
T Consensus 37 ~~h~kvLVvGGGsgGi~~A~k~~rkl~~g~vgIvep~e~HyYQPgfTLvGgGl~~l~~srr~~a~liP~----------- 105 (446)
T KOG3851|consen 37 RKHFKVLVVGGGSGGIGMAAKFYRKLGSGSVGIVEPAEDHYYQPGFTLVGGGLKSLDSSRRKQASLIPK----------- 105 (446)
T ss_pred ccceEEEEEcCCcchhHHHHHHHhhcCCCceEEecchhhcccCcceEEeccchhhhhhccCcccccccC-----------
Confidence 467899999999999999999999999999999999999999999999999998766665554444443
Q ss_pred cCCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhccCCcEEEeceEEEEEcCCCeEEcCCCcEEee
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDPENNRVRTQAGSEISY 624 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~y 624 (706)
+..+++++|...+|++++|.+.+|++|+|
T Consensus 106 ---------------------------------------------------~a~wi~ekv~~f~P~~N~v~t~gg~eIsY 134 (446)
T KOG3851|consen 106 ---------------------------------------------------GATWIKEKVKEFNPDKNTVVTRGGEEISY 134 (446)
T ss_pred ---------------------------------------------------CcHHHHHHHHhcCCCcCeEEccCCcEEee
Confidence 55667777888899999999999999999
Q ss_pred CEEEEecCcccCccCCCCchhhhccc
Q psy8791 625 EYMIVASGIQMYYDRVKGGTTSLEDR 650 (706)
Q Consensus 625 d~lViAtGs~~~~p~i~G~~~~~~~~ 650 (706)
|+||||+|-.-+.-.|+|+.|.++..
T Consensus 135 dylviA~Giql~y~~IkGl~Eal~tP 160 (446)
T KOG3851|consen 135 DYLVIAMGIQLDYGKIKGLVEALDTP 160 (446)
T ss_pred eeEeeeeeceeccchhcChHhhccCC
Confidence 99999999999999999999888765
No 83
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes the FAD binding domain which has a nested NADH binding domain and is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3IC9_A 1Q1W_A 3LB8_A 1Q1R_B 3GD4_A 1GV4_A 3GD3_A 2EQ9_E 2EQ6_B 2EQ8_E ....
Probab=99.65 E-value=3.1e-17 Score=160.38 Aligned_cols=110 Identities=26% Similarity=0.464 Sum_probs=75.7
Q ss_pred cEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcc-c-ccccCccccCcccc------cccccccCCCcEE-EE
Q psy8791 32 KLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPM-F-TLIGGGMKKLSDSR------RPMKSVLPSGATW-VK 102 (706)
Q Consensus 32 ~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~-~-~~~~~~~~~~~~~~------~~~~~~~~~~v~~-i~ 102 (706)
||||||||+||++||.+|++. +++|+|||+.+...+... + .............. .-.+++...++++ +.
T Consensus 1 ~vvIIGgG~aGl~aA~~l~~~--~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 78 (201)
T PF07992_consen 1 DVVIIGGGPAGLSAALELARP--GAKVLIIEKSPGTPYNSGCIPSPLLVEIAPHRHEFLPARLFKLVDQLKNRGVEIRLN 78 (201)
T ss_dssp EEEEESSSHHHHHHHHHHHHT--TSEEEEESSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHGHHHHHHHHHTHEEEHH
T ss_pred CEEEEecHHHHHHHHHHHhcC--CCeEEEEecccccccccccccccccccccccccccccccccccccccccceEEEeec
Confidence 699999999999999999977 899999999885444211 1 11100000000000 1122223467888 56
Q ss_pred ceeEEEEcCCCEE----------EeCCCeEEEecEEEEccccccccCCCCC
Q psy8791 103 DKIVSFDPENNRV----------RTQAGSEISYEYMIVASGIQMYYDRVKG 143 (706)
Q Consensus 103 ~~v~~id~~~~~v----------~~~~g~~~~yd~lviAtG~~~~~~~~~g 143 (706)
+++.+|+...+.+ ...++.++.||+||+|||+.+..+.+||
T Consensus 79 ~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~i~g 129 (201)
T PF07992_consen 79 AKVVSIDPESKRVVCPAVTIQVVETGDGREIKYDYLVIATGSRPRTPNIPG 129 (201)
T ss_dssp HTEEEEEESTTEEEETCEEEEEEETTTEEEEEEEEEEEESTEEEEEESSTT
T ss_pred cccccccccccccccCcccceeeccCCceEecCCeeeecCccccceeecCC
Confidence 8999999988842 2234568999999999999999899998
No 84
>PLN02172 flavin-containing monooxygenase FMO GS-OX
Probab=99.65 E-value=4.4e-15 Score=161.93 Aligned_cols=269 Identities=16% Similarity=0.136 Sum_probs=149.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcc----cCcc-------------------cc-----------
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHY----YQPM-------------------FT----------- 74 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~----~~p~-------------------~~----------- 74 (706)
..++|+|||||+|||+||++|++. |++|+++|+++... |.+. +.
T Consensus 9 ~~~~VaIIGAG~aGL~aA~~l~~~--G~~v~vfE~~~~vGG~W~~~~~~~~d~~~~~~~~~~~~s~~Y~~L~tn~p~~~m 86 (461)
T PLN02172 9 NSQHVAVIGAGAAGLVAARELRRE--GHTVVVFEREKQVGGLWVYTPKSESDPLSLDPTRSIVHSSVYESLRTNLPRECM 86 (461)
T ss_pred CCCCEEEECCcHHHHHHHHHHHhc--CCeEEEEecCCCCcceeecCCCcCCCccccCCCCcccchhhhhhhhccCCHhhc
Confidence 457999999999999999999998 89999999987521 1110 00
Q ss_pred ---cccCcc------------ccCcccccccccccC-CCcE--E-EEceeEEEEcCCC--EEEeCCC--e--EEEecEEE
Q psy8791 75 ---LIGGGM------------KKLSDSRRPMKSVLP-SGAT--W-VKDKIVSFDPENN--RVRTQAG--S--EISYEYMI 129 (706)
Q Consensus 75 ---~~~~~~------------~~~~~~~~~~~~~~~-~~v~--~-i~~~v~~id~~~~--~v~~~~g--~--~~~yd~lv 129 (706)
..+... ....++...+.++.. .+++ + ...+|++|++..+ .|.+.++ . +..||+||
T Consensus 87 ~f~dfp~~~~~~~~~~~~~~fp~~~ev~~YL~~~a~~fgl~~~I~~~t~V~~V~~~~~~w~V~~~~~~~~~~~~~~d~VI 166 (461)
T PLN02172 87 GYRDFPFVPRFDDESRDSRRYPSHREVLAYLQDFAREFKIEEMVRFETEVVRVEPVDGKWRVQSKNSGGFSKDEIFDAVV 166 (461)
T ss_pred cCCCCCCCcccccccCcCCCCCCHHHHHHHHHHHHHHcCCcceEEecCEEEEEeecCCeEEEEEEcCCCceEEEEcCEEE
Confidence 000000 000111111222222 3444 2 2478999988655 3544432 1 45799999
Q ss_pred Eccc--cccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHH
Q psy8791 130 VASG--IQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRN 207 (706)
Q Consensus 130 iAtG--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~ 207 (706)
+||| +.|+.|.+||.+ .|+++.+|+.. ...
T Consensus 167 vAtG~~~~P~~P~ipG~~--------------------~f~G~~iHs~~---------------------yr~------- 198 (461)
T PLN02172 167 VCNGHYTEPNVAHIPGIK--------------------SWPGKQIHSHN---------------------YRV------- 198 (461)
T ss_pred EeccCCCCCcCCCCCCcc--------------------cCCceEEEecc---------------------cCC-------
Confidence 9999 678888899932 23333333211 000
Q ss_pred HHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCC
Q psy8791 208 LQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGK 287 (706)
Q Consensus 208 l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~ 287 (706)
...+.+.+++| +|++ .....++. .+...+. +|+++++...... .+.+......+..+.
T Consensus 199 ~~~~~gk~VvV--------VG~G-~Sg~diA~-~L~~~a~----~V~l~~r~~~~~~--------~~~~~~~~~~v~~~~ 256 (461)
T PLN02172 199 PDPFKNEVVVV--------IGNF-ASGADISR-DIAKVAK----EVHIASRASESDT--------YEKLPVPQNNLWMHS 256 (461)
T ss_pred ccccCCCEEEE--------ECCC-cCHHHHHH-HHHHhCC----eEEEEEeeccccc--------cccCcCCCCceEECC
Confidence 01133333322 2222 12223333 2333332 4888887543211 011112234455566
Q ss_pred ceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch-hhhhcCCCCCCCCceeeCc--------cccccCC-CCCEEEc
Q psy8791 288 ALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV-PELATSRLVDQSGYVNVDK--------ATLQHVK-YSNVFAI 357 (706)
Q Consensus 288 ~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~-~~~~~~~l~~~~G~i~vd~--------~~l~~~~-~~~Ifa~ 357 (706)
.|..+..+ +.|++. ||+++++|.||+|||++++ +++.+. |.+.+|+ +.+ .+. .|++..+
T Consensus 257 ~I~~~~~~-g~V~f~---DG~~~~~D~Ii~~TGy~~~~pfL~~~------~~i~v~~~~v~~Ly~~~f-~~~~~p~Lafi 325 (461)
T PLN02172 257 EIDTAHED-GSIVFK---NGKVVYADTIVHCTGYKYHFPFLETN------GYMRIDENRVEPLYKHVF-PPALAPGLSFI 325 (461)
T ss_pred cccceecC-CeEEEC---CCCCccCCEEEECCcCCccccccCcc------cceeeCCCcchhhHHhhc-CCCCCCcEEEE
Confidence 67766544 346554 7889999999999999999 565543 3333332 122 233 4899999
Q ss_pred cccCCCCCCchHHHHHHhHHHHHHHH
Q psy8791 358 GDCSNLPTSKTAAAVAGQCKVVYDNL 383 (706)
Q Consensus 358 GD~~~~~~~~~~~~a~~qg~~~a~ni 383 (706)
|=.... .....+..||+.+|+-+
T Consensus 326 G~~~~~---~~f~~~E~Qa~~~a~v~ 348 (461)
T PLN02172 326 GLPAMG---IQFVMFEIQSKWVAAVL 348 (461)
T ss_pred eccccc---cCchhHHHHHHHHHHHH
Confidence 933211 23346678888888766
No 85
>KOG0399|consensus
Probab=99.64 E-value=3.9e-16 Score=171.63 Aligned_cols=322 Identities=14% Similarity=0.153 Sum_probs=175.1
Q ss_pred cccccccccccccccCCCCCCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCccc
Q psy8791 7 CPLKSYNLLSSSFSTSPLSSSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDS 86 (706)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~ 86 (706)
|++++++++..|+.+.++... ..++|.|||.|+|||+||-+|.+. |+.|||+||.++.... +...++....+...+
T Consensus 1763 ~aiid~af~egwm~p~pp~~r-tg~~vaiigsgpaglaaadqlnk~--gh~v~vyer~dr~ggl-l~ygipnmkldk~vv 1838 (2142)
T KOG0399|consen 1763 CAIIDKAFEEGWMKPCPPAFR-TGKRVAIIGSGPAGLAAADQLNKA--GHTVTVYERSDRVGGL-LMYGIPNMKLDKFVV 1838 (2142)
T ss_pred hHHHHHHHHhcCCccCCcccc-cCcEEEEEccCchhhhHHHHHhhc--CcEEEEEEecCCcCce-eeecCCccchhHHHH
Confidence 788999999999988877533 347999999999999999999999 9999999999973221 112233322222223
Q ss_pred ccccccccCCCcEEEEceeEEEEcCCCEEEeCCCeEEEecEEEEccccc-cccCCCCCCcccccccccccccccccccCc
Q psy8791 87 RRPMKSVLPSGATWVKDKIVSFDPENNRVRTQAGSEISYEYMIVASGIQ-MYYDRVKGPSALINALGHCDLVRSFVTFPL 165 (706)
Q Consensus 87 ~~~~~~~~~~~v~~i~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 165 (706)
.+...-+...+|+|+...- . .+.|.++ +-.-.+|.+|+|+|++ ++..++||-+ +-|.|
T Consensus 1839 ~rrv~ll~~egi~f~tn~e----i-gk~vs~d-~l~~~~daiv~a~gst~prdlpv~grd----~kgv~----------- 1897 (2142)
T KOG0399|consen 1839 QRRVDLLEQEGIRFVTNTE----I-GKHVSLD-ELKKENDAIVLATGSTTPRDLPVPGRD----LKGVH----------- 1897 (2142)
T ss_pred HHHHHHHHhhCceEEeecc----c-cccccHH-HHhhccCeEEEEeCCCCCcCCCCCCcc----ccccH-----------
Confidence 3334444458999976321 1 1223322 2234689999999984 7778889832 11111
Q ss_pred cCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCE-EEecCCCCeeeCChhHHHHHHHHHHHHH
Q psy8791 166 FFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPV-LYTFPATPIKCGGAPMKAVLIGDEYLRK 244 (706)
Q Consensus 166 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~-vv~~~~~~v~~~g~~~~~~~~~~~~l~~ 244 (706)
|..+.+|.- -+..++. .. -+..+ ..++.++ |++.|..+-.|.|... +
T Consensus 1898 -fame~l~~n-----tk~lld~----~~----------d~~~~-~~~gkkvivigggdtg~dcigtsv-----------r 1945 (2142)
T KOG0399|consen 1898 -FAMEFLEKN-----TKSLLDS----VL----------DGNYI-SAKGKKVIVIGGGDTGTDCIGTSV-----------R 1945 (2142)
T ss_pred -HHHHHHHHh-----HHhhhcc----cc----------cccee-ccCCCeEEEECCCCccccccccch-----------h
Confidence 111111100 0000000 00 00001 1122222 3444555555555421 1
Q ss_pred cCCCCCcEEEEEe-CC-Cc----CCC--chh-----HHHHHHHHHHhCCceEEc------------CCceE-----EEe-
Q psy8791 245 HKKRDAAKLTYCT-GM-GV----LFP--SPF-----YAEKIHDILIGRGVDVHK------------GKALV-----EID- 293 (706)
Q Consensus 245 ~g~~~~~~v~l~~-~~-~~----~~~--~~~-----~~~~~~~~l~~~gV~v~~------------~~~v~-----~i~- 293 (706)
+|-..-....++. +. .+ +.| |.. -...+++ ..|-+.++ +..|+ +|+
T Consensus 1946 hg~~sv~n~ellp~pp~~ra~~npwpqwprvfrvdygh~e~~~---~~g~dpr~y~vltk~f~~~~~g~v~gl~~vrvew 2022 (2142)
T KOG0399|consen 1946 HGCKSVGNFELLPQPPPERAPDNPWPQWPRVFRVDYGHAEAKE---HYGSDPRTYSVLTKRFIGDDNGNVTGLETVRVEW 2022 (2142)
T ss_pred hccceecceeecCCCCcccCCCCCCccCceEEEeecchHHHHH---HhCCCcceeeeeeeeeeccCCCceeeEEEEEEEE
Confidence 2211111111111 00 00 111 000 0111111 11211111 11222 221
Q ss_pred -C-CCCE-EEEEeCCCceEEeecEEEECCCCCch--hhhhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCc
Q psy8791 294 -L-ANKE-AVFKSEDKTERLPYAIMHVTPPMGPV--PELATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSK 367 (706)
Q Consensus 294 -~-~~~~-v~~~~~~~g~~i~~D~vI~a~G~~~~--~~~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~ 367 (706)
. +.+. ...+..++.+.++||+||++.|+..+ ...++.++ .+.++.|.+-...+ .++.+.|||+|||-....
T Consensus 2023 ~k~~~g~w~~~ei~~see~~eadlv~lamgf~gpe~~~~~~~~~~~d~rsni~t~~~~y-~t~v~~vfaagdcrrgqs-- 2099 (2142)
T KOG0399|consen 2023 EKDDKGRWQMKEINNSEEIIEADLVILAMGFVGPEKSVIEQLNLKTDPRSNILTPKDSY-STDVAKVFAAGDCRRGQS-- 2099 (2142)
T ss_pred EecCCCceEEEEcCCcceeeecceeeeeccccCcchhhhhhcCcccCccccccCCCccc-cccccceeecccccCCce--
Confidence 1 1111 22222235578999999999999988 34455677 77788787644233 488999999999998855
Q ss_pred hHHHHHHhHHHHHHHHHHHHcCCC
Q psy8791 368 TAAAVAGQCKVVYDNLSAVMKNRA 391 (706)
Q Consensus 368 ~~~~a~~qg~~~a~ni~~~l~g~~ 391 (706)
+...|+++|+.+|+.+...+.|+.
T Consensus 2100 lvvwai~egrq~a~~vd~~~~~~t 2123 (2142)
T KOG0399|consen 2100 LVVWAIQEGRQAARQVDELMGGTT 2123 (2142)
T ss_pred EEEEEehhhhHHHHHHHHHhCCcc
Confidence 556789999999999988665553
No 86
>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion]
Probab=99.64 E-value=1.2e-16 Score=171.33 Aligned_cols=189 Identities=17% Similarity=0.185 Sum_probs=124.1
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
+.+||+||||+|+||..+|.++.+. +.++++||+.+. .||.| ++..|+|+|.|+.++..+.......
T Consensus 2 ~~~yDvvVIG~GpaG~~aA~raa~~--G~kvalvE~~~~----------lGGtC-ln~GCIPsK~Ll~~a~~~~~~~~~~ 68 (454)
T COG1249 2 MKEYDVVVIGAGPAGYVAAIRAAQL--GLKVALVEKGER----------LGGTC-LNVGCIPSKALLHAAEVIEEARHAA 68 (454)
T ss_pred CccccEEEECCCHHHHHHHHHHHhC--CCCEEEEeecCC----------cCceE-EeeCccccHHHHHHHHHHHHHhhcc
Confidence 4579999999999999999999998 555999998642 13332 4566678999988875543332221
Q ss_pred cCCCceEEEeeecceecCCCcccccCcccccccccc-cccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCC--Cc
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMK-KLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQA--GS 620 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~--g~ 620 (706)
...++... .+ ...|..+..... ..+.+...+..+++ ++|+++.+++.++|+. +|.+.+ .+
T Consensus 69 ~~~Gi~~~--------~~------~id~~~~~~~k~~v~~~~~~~~~~l~~~~~V~vi~G~a~f~~~~--~v~V~~~~~~ 132 (454)
T COG1249 69 KEYGISAE--------VP------KIDFEKLLARKDKVVRLLTGGVEGLLKKNGVDVIRGEARFVDPH--TVEVTGEDKE 132 (454)
T ss_pred cccceecC--------CC------CcCHHHHHHHHHHHHHHHhhhHHHHHhhCCCEEEEEEEEECCCC--EEEEcCCCce
Confidence 11111110 00 000111111111 11222333445555 5999999999999954 555544 47
Q ss_pred EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhhh
Q psy8791 621 EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKRK 690 (706)
Q Consensus 621 ~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~~ 690 (706)
++++|++||||||+|..|++||++.. .+.++.........|++++|| |+|+|+.++++..++
T Consensus 133 ~~~a~~iiIATGS~p~~~~~~~~~~~--------~~~~s~~~l~~~~lP~~lvIiGgG~IGlE~a~~~~~LG~~V 199 (454)
T COG1249 133 TITADNIIIATGSRPRIPPGPGIDGA--------RILDSSDALFLLELPKSLVIVGGGYIGLEFASVFAALGSKV 199 (454)
T ss_pred EEEeCEEEEcCCCCCcCCCCCCCCCC--------eEEechhhcccccCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence 89999999999999999999998732 133333333333689999999 999999999988653
No 87
>PRK14989 nitrite reductase subunit NirD; Provisional
Probab=99.62 E-value=8.7e-16 Score=178.30 Aligned_cols=158 Identities=13% Similarity=0.203 Sum_probs=111.2
Q ss_pred cccccccCcchhHHHHHHHHHhhc--CCCcEEEECCCCCCcCCcceE-EeeccccccccccccccccCCCCccccccccc
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRL--GKGQVSIVEPTDDHYYQPMFT-LIGGGMKKLSDSRRPMKSVLPSGATWVKDKIV 543 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~--~~~~i~vid~~~~~~~~~~~~-~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~ 543 (706)
+++|||||+|+||+.+|.+|+++. ++.+|+||++++++.|.+... ...++
T Consensus 3 ~~kIVIVG~G~AG~~aa~~L~~~~~~~~~~Itvi~~e~~~~Y~r~~L~~~~~~--------------------------- 55 (847)
T PRK14989 3 KVRLAIIGNGMVGHRFIEDLLDKADAANFDITVFCEEPRIAYDRVHLSSYFSH--------------------------- 55 (847)
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCCCCCCeEEEEECCCCCcccCCcchHhHcC---------------------------
Confidence 348999999999999999998763 357999999999887766321 11000
Q ss_pred ccCCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhc-cCCcEEEec-eEEEEEcCCCeEEcCCCcE
Q psy8791 544 SFDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PSGATWVKD-KIVSFDPENNRVRTQAGSE 621 (706)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~~~~~-~v~~id~~~~~V~~~~g~~ 621 (706)
...+++......++ ..||+++.+ +|+.||++.+.|++.+|++
T Consensus 56 ------------------------------------~~~~~l~~~~~~~~~~~gI~~~~g~~V~~Id~~~~~V~~~~G~~ 99 (847)
T PRK14989 56 ------------------------------------HTAEELSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRT 99 (847)
T ss_pred ------------------------------------CCHHHccCCCHHHHHhCCCEEEcCCEEEEEeCCCcEEEECCCcE
Confidence 01112222222222 368999765 6999999999999999999
Q ss_pred EeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 622 ISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 622 i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
++||+|||||||+|+.|++||.+ ...+..++...+..........+++++|| |+|+|..|+++..+
T Consensus 100 i~yD~LVIATGs~p~~p~ipG~~--~~~v~~~rt~~d~~~l~~~~~~~k~vvVIGgG~iGlE~A~~L~~~G~~ 170 (847)
T PRK14989 100 VFYDKLIMATGSYPWIPPIKGSE--TQDCFVYRTIEDLNAIEACARRSKRGAVVGGGLLGLEAAGALKNLGVE 170 (847)
T ss_pred EECCEEEECCCCCcCCCCCCCCC--CCCeEEECCHHHHHHHHHHHhcCCeEEEECCCHHHHHHHHHHHHcCCe
Confidence 99999999999999999999976 22222233322222222333467889999 99999999887543
No 88
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional
Probab=99.62 E-value=8.9e-16 Score=165.17 Aligned_cols=153 Identities=11% Similarity=0.175 Sum_probs=105.2
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCc-ceEEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQP-MFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~-~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
++|||||||+||+++|+.+++..++.+|+||++++++.|+. .++..
T Consensus 3 ~~vvIiG~G~AG~~~a~~lr~~~~~~~Itvi~~~~~~~y~~~~l~~~--------------------------------- 49 (377)
T PRK04965 3 NGIVIIGSGFAARQLVKNIRKQDAHIPITLITADSGDEYNKPDLSHV--------------------------------- 49 (377)
T ss_pred CCEEEECCcHHHHHHHHHHHhhCcCCCEEEEeCCCCCCcCcCcCcHH---------------------------------
Confidence 48999999999999999999988889999999988766532 21111
Q ss_pred CCceEEEeeecceecCCCcccccCccccccccccccccccc-chhhhcc-CCcEEE-eceEEEEEcCCCeEEcCCCcEEe
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRR-PMKSVLP-SGATWV-KDKIVSFDPENNRVRTQAGSEIS 623 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~gv~~~-~~~v~~id~~~~~V~~~~g~~i~ 623 (706)
..+....+++.. ...++.+ .|++++ +++|++||+++++|.+ +++++.
T Consensus 50 -----------------------------~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~V~~id~~~~~v~~-~~~~~~ 99 (377)
T PRK04965 50 -----------------------------FSQGQRADDLTRQSAGEFAEQFNLRLFPHTWVTDIDAEAQVVKS-QGNQWQ 99 (377)
T ss_pred -----------------------------HhCCCCHHHhhcCCHHHHHHhCCCEEECCCEEEEEECCCCEEEE-CCeEEe
Confidence 011111122221 2233332 589986 5689999999888886 566899
Q ss_pred eCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHH
Q psy8791 624 YEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLT 687 (706)
Q Consensus 624 yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~ 687 (706)
||+||||||++|..|++||.+. +..++...+..........+++++|| |+|+|..|.+..
T Consensus 100 yd~LVlATG~~~~~p~i~G~~~----v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~L~~~g 164 (377)
T PRK04965 100 YDKLVLATGASAFVPPIPGREL----MLTLNSQQEYRAAETQLRDAQRVLVVGGGLIGTELAMDLCRAG 164 (377)
T ss_pred CCEEEECCCCCCCCCCCCCCce----EEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhcC
Confidence 9999999999999999999753 22222222211122222356789999 899999887654
No 89
>KOG2495|consensus
Probab=99.62 E-value=6.5e-16 Score=156.38 Aligned_cols=177 Identities=19% Similarity=0.344 Sum_probs=128.4
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
+.++|||+|+|.+|+++++.|-.. .++|+||++.+++.|.|+++.+..|+..+..+..|++.+.+.
T Consensus 54 kKk~vVVLGsGW~a~S~lk~ldts--~YdV~vVSPRnyFlFTPLLpS~~vGTve~rSIvEPIr~i~r~------------ 119 (491)
T KOG2495|consen 54 KKKRVVVLGSGWGAISLLKKLDTS--LYDVTVVSPRNYFLFTPLLPSTTVGTVELRSIVEPIRAIARK------------ 119 (491)
T ss_pred CCceEEEEcCchHHHHHHHhcccc--ccceEEeccccceEEeeccCCccccceeehhhhhhHHHHhhc------------
Confidence 467899999999999999999766 689999999999999999988777775555544443221111
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhccCCcEEEeceEEEEEcCCCeEEcC----CC--
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDPENNRVRTQ----AG-- 619 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~V~~~----~g-- 619 (706)
...++.+++.+...||+++++|++. ++
T Consensus 120 -----------------------------------------------k~~~~~y~eAec~~iDp~~k~V~~~s~t~~~~~ 152 (491)
T KOG2495|consen 120 -----------------------------------------------KNGEVKYLEAECTKIDPDNKKVHCRSLTADSSD 152 (491)
T ss_pred -----------------------------------------------cCCCceEEecccEeecccccEEEEeeeccCCCc
Confidence 1126788999999999999988663 34
Q ss_pred --cEEeeCEEEEecCcccCccCCCCchhh------hcccccccc-cccCccchhhh----ccCc---cEEEE-----cHH
Q psy8791 620 --SEISYEYMIVASGIQMYYDRVKGGTTS------LEDRGKMRG-VSDGFSTVTWE----QKHK---QYQLV-----SPE 678 (706)
Q Consensus 620 --~~i~yd~lViAtGs~~~~p~i~G~~~~------~~~~~~~~~-~~~~~~~~~~~----~~~k---~vvVi-----G~E 678 (706)
-.+.|||||+|+|+.++.+.|||..+. .+++..++. +.++++..... .+.+ ++||| |+|
T Consensus 153 ~e~~i~YDyLViA~GA~~~TFgipGV~e~~~FLKEv~dAqeIR~~~~~~le~a~~~~l~~eerkRlLh~VVVGGGPTGVE 232 (491)
T KOG2495|consen 153 KEFVIGYDYLVIAVGAEPNTFGIPGVEENAHFLKEVEDAQEIRRKVIDNLEKAELPGLSDEERKRLLHFVVVGGGPTGVE 232 (491)
T ss_pred ceeeecccEEEEeccCCCCCCCCCchhhchhhhhhhhHHHHHHHHHHHHHHHhhcCCCChHHhhheEEEEEECCCCccee
Confidence 368999999999999999999997631 223333322 12222222211 1112 37788 999
Q ss_pred HHHHHHHHHhhhhhhhccccccccc
Q psy8791 679 IRAKAYDLTKRKMKKEAQWIRFQEK 703 (706)
Q Consensus 679 ~A~~l~~~~~~~~~~~~~~~~~~~~ 703 (706)
+|++|+++..+..++-||.+...-+
T Consensus 233 FAaEL~Dfi~~Dl~k~yp~l~~~i~ 257 (491)
T KOG2495|consen 233 FAAELADFIPEDLRKIYPELKKDIK 257 (491)
T ss_pred ehHHHHHHHHHHHHHhhhcchhheE
Confidence 9999999999999999988765544
No 90
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=99.61 E-value=1.2e-15 Score=166.99 Aligned_cols=156 Identities=16% Similarity=0.152 Sum_probs=102.8
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCc-ceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQP-MFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~-~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
|++|||||||+||+++|.+|+++.++.+|+|||+++++.|.+ .++.+.++...
T Consensus 1 m~~VVIIGgG~aG~~aA~~l~~~~~~~~I~li~~~~~~~~~~~~lp~~~~~~~~-------------------------- 54 (438)
T PRK13512 1 MPKIIVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYYIGEVVE-------------------------- 54 (438)
T ss_pred CCeEEEECCcHHHHHHHHHHHhhCCCCCEEEEECCCCcccccCCcchhhcCccC--------------------------
Confidence 568999999999999999999887789999999999887765 33322222110
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccc-cccchhhhcc-CCcEE-EeceEEEEEcCCCeEEcCCC---
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSD-SRRPMKSVLP-SGATW-VKDKIVSFDPENNRVRTQAG--- 619 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~gv~~-~~~~v~~id~~~~~V~~~~g--- 619 (706)
..++ +......+.+ .|+++ +.++|+.||+++++|.+.++
T Consensus 55 -----------------------------------~~~~~~~~~~~~~~~~~~i~v~~~~~V~~Id~~~~~v~~~~~~~~ 99 (438)
T PRK13512 55 -----------------------------------DRKYALAYTPEKFYDRKQITVKTYHEVIAINDERQTVTVLNRKTN 99 (438)
T ss_pred -----------------------------------CHHHcccCCHHHHHHhCCCEEEeCCEEEEEECCCCEEEEEECCCC
Confidence 0000 0111122222 58888 56899999999999987653
Q ss_pred c--EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchh--hhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 620 S--EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVT--WEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 620 ~--~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+ +++||+||||||++|+.|++++.. +..++...+...... ....+++++|| |+|+|..|+++..
T Consensus 100 ~~~~~~yd~lviAtGs~~~~~~~~~~~-----~~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~ig~E~A~~l~~~g~ 172 (438)
T PRK13512 100 EQFEESYDKLILSPGASANSLGFESDI-----TFTLRNLEDTDAIDQFIKANQVDKALVVGAGYISLEVLENLYERGL 172 (438)
T ss_pred cEEeeecCEEEECCCCCCCCCCCCCCC-----eEEecCHHHHHHHHHHHhhcCCCEEEEECCCHHHHHHHHHHHhCCC
Confidence 2 479999999999999877665311 111122211111111 12246899999 9999998877653
No 91
>TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit.
Probab=99.61 E-value=1.2e-15 Score=177.54 Aligned_cols=156 Identities=20% Similarity=0.254 Sum_probs=110.4
Q ss_pred ccccCcchhHHHHHHHHHhhc-CCCcEEEECCCCCCcCCcc-eEEeeccccccccccccccccCCCCcccccccccccCC
Q psy8791 470 LGVVGGGAAGCSMAAKFTSRL-GKGQVSIVEPTDDHYYQPM-FTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDS 547 (706)
Q Consensus 470 ivIIGaG~aG~~~a~~l~~~~-~~~~i~vid~~~~~~~~~~-~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 547 (706)
|||||+|+||+++|.+|++.. ++.+|+||++++++.|.+. ++.+.
T Consensus 1 iVIIG~G~AG~~aa~~l~~~~~~~~~Itvi~~e~~~~y~r~~L~~~l--------------------------------- 47 (785)
T TIGR02374 1 LVLVGNGMAGHRCIEEVLKLNRHMFEITIFGEEPHPNYNRILLSSVL--------------------------------- 47 (785)
T ss_pred CEEECCCHHHHHHHHHHHhcCCCCCeEEEEeCCCCCCcccccccHHH---------------------------------
Confidence 689999999999999999875 4579999999988776543 11111
Q ss_pred CceEEEeeecceecCCCcccccCcccccccccccccccccchhhhc-cCCcEEEec-eEEEEEcCCCeEEcCCCcEEeeC
Q psy8791 548 SYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PSGATWVKD-KIVSFDPENNRVRTQAGSEISYE 625 (706)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~~~~~-~v~~id~~~~~V~~~~g~~i~yd 625 (706)
.+....+++.....+++ +.||+++.+ +|+.||+++++|++.+|++++||
T Consensus 48 -----------------------------~g~~~~~~l~~~~~~~~~~~gv~~~~g~~V~~Id~~~k~V~~~~g~~~~yD 98 (785)
T TIGR02374 48 -----------------------------QGEADLDDITLNSKDWYEKHGITLYTGETVIQIDTDQKQVITDAGRTLSYD 98 (785)
T ss_pred -----------------------------CCCCCHHHccCCCHHHHHHCCCEEEcCCeEEEEECCCCEEEECCCcEeeCC
Confidence 11112222223333333 368999754 89999999999999999999999
Q ss_pred EEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 626 YMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 626 ~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
+||||||++|+.|++||.+ ...+..++...+...........++++|| |+|+|..|+++..+
T Consensus 99 ~LVlATGs~p~~p~ipG~~--~~~v~~~rt~~d~~~i~~~~~~~k~vvVVGgG~~GlE~A~~L~~~G~~ 165 (785)
T TIGR02374 99 KLILATGSYPFILPIPGAD--KKGVYVFRTIEDLDAIMAMAQRFKKAAVIGGGLLGLEAAVGLQNLGMD 165 (785)
T ss_pred EEEECCCCCcCCCCCCCCC--CCCEEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhcCCe
Confidence 9999999999999999976 23333333322222222233456889999 99999999877643
No 92
>PRK14694 putative mercuric reductase; Provisional
Probab=99.61 E-value=7.3e-16 Score=170.34 Aligned_cols=189 Identities=16% Similarity=0.187 Sum_probs=117.0
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
.+.+||+|||||+||+++|..|++. +.+|+|||++. .||.|. +..|.|.|.++.+...........
T Consensus 4 ~~~~dviVIGaG~aG~~aA~~l~~~--g~~v~lie~~~-----------~GGtc~-n~GciPsk~l~~~a~~~~~~~~~~ 69 (468)
T PRK14694 4 DNNLHIAVIGSGGSAMAAALKATER--GARVTLIERGT-----------IGGTCV-NIGCVPSKIMIRAAHIAHLRRESP 69 (468)
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC--CCcEEEEEccc-----------ccccee-cCCccccHHHHHHHHHHHHHhhcc
Confidence 3578999999999999999999998 78999999843 144443 455578877766543221111000
Q ss_pred cCCCceEEEeeecceecCCCcccccCccccccccccc-cccccc-chhhhcc--CCcEEEeceEEEEEcCCCeEEcCCCc
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKK-LSDSRR-PMKSVLP--SGATWVKDKIVSFDPENNRVRTQAGS 620 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~--~gv~~~~~~v~~id~~~~~V~~~~g~ 620 (706)
+. ..+ ... .....|..+...... .+.+.. .+...+. .+++++.++|+++|++.++|++.+|+
T Consensus 70 ~~--~g~---------~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~g~v~~id~~~~~V~~~~g~ 135 (468)
T PRK14694 70 FD--DGL---------SAQ---APVVDRSALLAQQQARVEELRESKYQSILRENAAITVLNGEARFVDERTLTVTLNDGG 135 (468)
T ss_pred cc--CCc---------ccC---CCccCHHHHHHHHHHHHHHHhcccHHHHHhcCCCeEEEEEEEEEecCCEEEEEecCCC
Confidence 00 000 000 000011111100000 011111 1223332 38999999999999998889888773
Q ss_pred --EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 621 --EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 621 --~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
+++||+||||||++|..|++||+++. .+++..........+++++|| |+|+|..|+++..+
T Consensus 136 ~~~~~~d~lViATGs~p~~p~i~G~~~~--------~~~~~~~~~~l~~~~~~vvViG~G~~G~E~A~~l~~~g~~ 203 (468)
T PRK14694 136 EQTVHFDRAFIGTGARPAEPPVPGLAET--------PYLTSTSALELDHIPERLLVIGASVVALELAQAFARLGSR 203 (468)
T ss_pred eEEEECCEEEEeCCCCCCCCCCCCCCCC--------ceEcchhhhchhcCCCeEEEECCCHHHHHHHHHHHHcCCe
Confidence 79999999999999999999997631 111111222233457899999 89999998877644
No 93
>PRK06467 dihydrolipoamide dehydrogenase; Reviewed
Probab=99.58 E-value=1.4e-15 Score=167.91 Aligned_cols=188 Identities=15% Similarity=0.112 Sum_probs=111.9
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
+.+|||+|||||+||+.+|.++++. +.+|+|||+++.+ ||.| ++..|.|.|.|+.....+......
T Consensus 2 ~~~~DvvVIG~GpaG~~aA~~aa~~--G~~V~lie~~~~~----------GG~c-~n~gciP~K~l~~~a~~~~~~~~~- 67 (471)
T PRK06467 2 EIKTQVVVLGAGPAGYSAAFRAADL--GLETVCVERYSTL----------GGVC-LNVGCIPSKALLHVAKVIEEAKAL- 67 (471)
T ss_pred CccceEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCcc----------cccc-cCCCcccHHHHHHHHHHHHHHhhh-
Confidence 4579999999999999999999998 8999999985422 4444 556667888777654322211100
Q ss_pred cCCCceEEEeeecceecCCCcccccCccccccccc-ccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCC--c
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGM-KKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAG--S 620 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g--~ 620 (706)
..+.+ .... ....+..+.... ...+++...+...++ .||+++.+++.++|++...|...+| .
T Consensus 68 --~~~g~---------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~a~~~~~~~v~v~~~~g~~~ 133 (471)
T PRK06467 68 --AEHGI---------VFGE---PKIDIDKMRARKEKVVKQLTGGLAGMAKGRKVTVVNGLGKFTGGNTLEVTGEDGKTT 133 (471)
T ss_pred --hhcCc---------ccCC---CCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCEEEEecCCCceE
Confidence 00000 0000 000000000000 001112222233333 6999999999998876545655566 4
Q ss_pred EEeeCEEEEecCcccCc-cCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 621 EISYEYMIVASGIQMYY-DRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 621 ~i~yd~lViAtGs~~~~-p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
++.||+||||||++|.. |.+++..+. ..+..........+++++|| |+|+|..++++..+
T Consensus 134 ~~~~d~lViATGs~p~~~p~~~~~~~~---------v~~~~~~~~~~~~~~~vvIiGgG~iG~E~A~~l~~~G~~ 199 (471)
T PRK06467 134 VIEFDNAIIAAGSRPIQLPFIPHDDPR---------IWDSTDALELKEVPKRLLVMGGGIIGLEMGTVYHRLGSE 199 (471)
T ss_pred EEEcCEEEEeCCCCCCCCCCCCCCCCc---------EEChHHhhccccCCCeEEEECCCHHHHHHHHHHHHcCCC
Confidence 79999999999999974 445553211 11111222233457899999 99999999876644
No 94
>PRK08010 pyridine nucleotide-disulfide oxidoreductase; Provisional
Probab=99.58 E-value=2.3e-15 Score=165.39 Aligned_cols=172 Identities=16% Similarity=0.223 Sum_probs=109.4
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
+.|||||||||+||++||..|+++ +.+|+|||+++... ||.|. +..|.|.|.++.....
T Consensus 2 ~~yDvvVIGgGpaGl~aA~~la~~--g~~V~lie~~~~~~---------GG~~~-~~gcip~k~l~~~~~~--------- 60 (441)
T PRK08010 2 NKYQAVIIGFGKAGKTLAVTLAKA--GWRVALIEQSNAMY---------GGTCI-NIGCIPTKTLVHDAQQ--------- 60 (441)
T ss_pred CcCCEEEECCCHhHHHHHHHHHHC--CCeEEEEcCCCCcc---------ceeEe-eccccchHHHHHHhcc---------
Confidence 458999999999999999999998 78999999865321 34332 3334555554443210
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccc-ccccc-chhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCc-E
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKL-SDSRR-PMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGS-E 621 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~-~ 621 (706)
. ..+.......... +.+.. ....+.+ .+++++.++++++|++...|.+.++. +
T Consensus 61 -----------------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~ 117 (441)
T PRK08010 61 -----------------H------TDFVRAIQRKNEVVNFLRNKNFHNLADMPNIDVIDGQAEFINNHSLRVHRPEGNLE 117 (441)
T ss_pred -----------------C------CCHHHHHHHHHHHHHHHHHhHHHHHhhcCCcEEEEEEEEEecCCEEEEEeCCCeEE
Confidence 0 0000000000000 00000 1122223 48999999999999876677777775 7
Q ss_pred EeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 622 ISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 622 i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+.||+||||||++|..|++||+++. .. ..+..........+++++|| |+|+|..|+++..
T Consensus 118 ~~~d~lviATGs~p~~p~i~G~~~~-~~------v~~~~~~~~~~~~~~~v~ViGgG~~g~E~A~~l~~~g~ 182 (441)
T PRK08010 118 IHGEKIFINTGAQTVVPPIPGITTT-PG------VYDSTGLLNLKELPGHLGILGGGYIGVEFASMFANFGS 182 (441)
T ss_pred EEeCEEEEcCCCcCCCCCCCCccCC-CC------EEChhHhhcccccCCeEEEECCCHHHHHHHHHHHHCCC
Confidence 9999999999999999999997532 11 11122222233467899999 9999999887653
No 95
>PRK09564 coenzyme A disulfide reductase; Reviewed
Probab=99.57 E-value=5.8e-15 Score=162.68 Aligned_cols=157 Identities=22% Similarity=0.325 Sum_probs=104.5
Q ss_pred cccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcc-eEEeeccccccccccccccccCCCCcccccccccccCC
Q psy8791 469 HLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPM-FTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDS 547 (706)
Q Consensus 469 ~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~-~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 547 (706)
+|||||||+||+++|..|++..++.+|+|||+++++.|.+. ++...++..
T Consensus 2 ~vvIIGgG~aGl~aA~~l~~~~~~~~Vtli~~~~~~~~~~~~~~~~~~~~~----------------------------- 52 (444)
T PRK09564 2 KIIIIGGTAAGMSAAAKAKRLNKELEITVYEKTDIVSFGACGLPYFVGGFF----------------------------- 52 (444)
T ss_pred eEEEECCcHHHHHHHHHHHHHCCCCcEEEEECCCcceeecCCCceEecccc-----------------------------
Confidence 79999999999999999999866789999999988776542 111111100
Q ss_pred CceEEEeeecceecCCCcccccCcccccccccccccccc-cchhhhccCCcEEE-eceEEEEEcCCCeEEcCC---CcEE
Q psy8791 548 SYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSR-RPMKSVLPSGATWV-KDKIVSFDPENNRVRTQA---GSEI 622 (706)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gv~~~-~~~v~~id~~~~~V~~~~---g~~i 622 (706)
...+++. .....+.+.|++++ +++|++||+++++|.+.+ ++++
T Consensus 53 --------------------------------~~~~~~~~~~~~~~~~~gv~~~~~~~V~~id~~~~~v~~~~~~~~~~~ 100 (444)
T PRK09564 53 --------------------------------DDPNTMIARTPEEFIKSGIDVKTEHEVVKVDAKNKTITVKNLKTGSIF 100 (444)
T ss_pred --------------------------------CCHHHhhcCCHHHHHHCCCeEEecCEEEEEECCCCEEEEEECCCCCEE
Confidence 0001111 12222333689984 679999999999887754 5667
Q ss_pred e--eCEEEEecCcccCccCCCCchhhhcccccccccccCccchhh--hccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 623 S--YEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTW--EQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 623 ~--yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
. ||+||||||++|..|++||++ .+.+..++...+....... ...+++|+|| |+|+|..+.++..
T Consensus 101 ~~~yd~lviAtG~~~~~~~i~g~~--~~~v~~~~~~~~~~~l~~~l~~~~~~~vvVvGgG~~g~e~A~~l~~~g~ 173 (444)
T PRK09564 101 NDTYDKLMIATGARPIIPPIKNIN--LENVYTLKSMEDGLALKELLKDEEIKNIVIIGAGFIGLEAVEAAKHLGK 173 (444)
T ss_pred EecCCEEEECCCCCCCCCCCCCcC--CCCEEEECCHHHHHHHHHHHhhcCCCEEEEECCCHHHHHHHHHHHhcCC
Confidence 6 999999999999999999975 2222222222111111111 1246889999 8999998876554
No 96
>COG1148 HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion]
Probab=99.57 E-value=2.5e-13 Score=139.39 Aligned_cols=136 Identities=16% Similarity=0.174 Sum_probs=91.7
Q ss_pred CCcEEEEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCC-CC--EEEEEeCCCc--eEEeecEEEECCCCCc
Q psy8791 249 DAAKLTYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLA-NK--EAVFKSEDKT--ERLPYAIMHVTPPMGP 323 (706)
Q Consensus 249 ~~~~v~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~-~~--~v~~~~~~~g--~~i~~D~vI~a~G~~~ 323 (706)
++.+++++...-+.++ ....+++.+.-.+.||+++.|. +.+|... ++ .|..+.+-.| .++++|+||+++|..|
T Consensus 399 Pd~~v~I~YmDiRafG-~~yEefY~~~Q~~~gV~fIRGr-vaei~e~p~~~l~V~~EdTl~g~~~e~~~DLVVLa~Gmep 476 (622)
T COG1148 399 PDTDVTIYYMDIRAFG-KDYEEFYVRSQEDYGVRFIRGR-VAEIAEFPKKKLIVRVEDTLTGEVKEIEADLVVLATGMEP 476 (622)
T ss_pred CCcceeEEEEEeeccC-ccHHHHHHhhhhhhchhhhcCC-hHHheeCCCCeeEEEEEeccCccceecccceEEEeecccc
Confidence 4456777766666664 3445555555568999999984 4444432 22 3444444344 4789999999999998
Q ss_pred hhh---h-hcCCC-CCCCCceeeCcccccc--CCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcC
Q psy8791 324 VPE---L-ATSRL-VDQSGYVNVDKATLQH--VKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKN 389 (706)
Q Consensus 324 ~~~---~-~~~~l-~~~~G~i~vd~~~l~~--~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g 389 (706)
.+- + ..+|| .+++||+...+..++. +..++||.+|=|.. |+....++.||..+|....+.+..
T Consensus 477 ~~g~~kia~iLgL~~~~~gF~k~~hPkl~pv~s~~~GIflAG~aqg---PkdI~~siaqa~aAA~kA~~~l~~ 546 (622)
T COG1148 477 SEGAKKIAKILGLSQDEDGFLKEAHPKLRPVDSNRDGIFLAGAAQG---PKDIADSIAQAKAAAAKAAQLLGR 546 (622)
T ss_pred CcchHHHHHhcCcccCCCCccccCCCCcccccccCCcEEEeecccC---CccHHHHHHHhHHHHHHHHHHhhc
Confidence 632 3 33688 8889999877433442 35689999994333 678888899998888777776653
No 97
>PLN02507 glutathione reductase
Probab=99.56 E-value=2.7e-15 Score=166.21 Aligned_cols=194 Identities=13% Similarity=0.111 Sum_probs=116.0
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccc-ccc
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKI-VSF 545 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~ 545 (706)
.||++|||||+||+.+|.++.+. +.+|+|||++....-... ..-.||+| ++..|+|.|.|+..+........ ..+
T Consensus 25 ~yDvvVIG~GpaG~~aA~~a~~~--G~~V~liE~~~~~~~~~~-~~~~GGtc-~n~GciPsK~l~~~a~~~~~~~~~~~~ 100 (499)
T PLN02507 25 DFDLFVIGAGSGGVRAARFSANF--GAKVGICELPFHPISSES-IGGVGGTC-VIRGCVPKKILVYGATFGGEFEDAKNY 100 (499)
T ss_pred ccCEEEECCCHHHHHHHHHHHHC--CCeEEEEeccCccccccc-CCCcccee-eccCchhHHHHHHHHHHHHHHHHHHhc
Confidence 58999999999999999999998 899999996210000000 00124444 34556788888766533221110 000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCc--E
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGS--E 621 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~--~ 621 (706)
+ +.+ ... ....+..+... ....+.+...+..++. .+|+++.+++.++|++..+|.+.+|+ +
T Consensus 101 G--~~~---------~~~----~~id~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~i~g~a~~vd~~~v~V~~~~g~~~~ 165 (499)
T PLN02507 101 G--WEI---------NEK----VDFNWKKLLQKKTDEILRLNGIYKRLLANAGVKLYEGEGKIVGPNEVEVTQLDGTKLR 165 (499)
T ss_pred C--ccc---------CCC----CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEecCCEEEEEeCCCcEEE
Confidence 0 000 000 00000000000 0011112222333333 69999999999999988888887876 5
Q ss_pred EeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 622 ISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 622 i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
+.||+||||||++|..|++||.+... +......+...+++++|| |+|+|..++++..+
T Consensus 166 ~~~d~LIIATGs~p~~p~ipG~~~~~----------~~~~~~~l~~~~k~vvVIGgG~ig~E~A~~l~~~G~~ 228 (499)
T PLN02507 166 YTAKHILIATGSRAQRPNIPGKELAI----------TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGAT 228 (499)
T ss_pred EEcCEEEEecCCCCCCCCCCCcccee----------chHHhhhhhhcCCeEEEECCcHHHHHHHHHHHHcCCe
Confidence 88999999999999999999964211 111122223457899999 99999988776543
No 98
>KOG2755|consensus
Probab=99.56 E-value=1.6e-14 Score=136.76 Aligned_cols=106 Identities=21% Similarity=0.363 Sum_probs=69.5
Q ss_pred cEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCcccccccccccCCCcEEEEceeEEEEcC
Q psy8791 32 KLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDPE 111 (706)
Q Consensus 32 ~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~v~~id~~ 111 (706)
+.+|||||.||.+||.+|+.+.|..+|+||...+..-....+..+..-....+.-......+.+.--+|+.. |..++..
T Consensus 1 kfivvgggiagvscaeqla~~~psa~illitass~vksvtn~~~i~~ylekfdv~eq~~~elg~~f~~~~~~-v~~~~s~ 79 (334)
T KOG2755|consen 1 KFIVVGGGIAGVSCAEQLAQLEPSAEILLITASSFVKSVTNYQKIGQYLEKFDVKEQNCHELGPDFRRFLND-VVTWDSS 79 (334)
T ss_pred CeEEEcCccccccHHHHHHhhCCCCcEEEEeccHHHHHHhhHHHHHHHHHhcCccccchhhhcccHHHHHHh-hhhhccc
Confidence 368999999999999999999889999999988752111111000000000000000111122211134444 7888888
Q ss_pred CCEEEeCCCeEEEecEEEEcccccccc
Q psy8791 112 NNRVRTQAGSEISYEYMIVASGIQMYY 138 (706)
Q Consensus 112 ~~~v~~~~g~~~~yd~lviAtG~~~~~ 138 (706)
++.+.+.+|.++.|++|++|+|.+|..
T Consensus 80 ehci~t~~g~~~ky~kKOG~tg~kPkl 106 (334)
T KOG2755|consen 80 EHCIHTQNGEKLKYFKLCLCTGYKPKL 106 (334)
T ss_pred cceEEecCCceeeEEEEEEecCCCcce
Confidence 999999999999999999999999874
No 99
>PF00743 FMO-like: Flavin-binding monooxygenase-like; InterPro: IPR020946 Flavin-containing monooxygenases (FMOs) constitute a family of xenobiotic-metabolising enzymes []. Using an NADPH cofactor and FAD prosthetic group, these microsomal proteins catalyse the oxygenation of nucleophilic nitrogen, sulphur, phosphorous and selenium atoms in a range of structurally diverse compounds. FMOs have been implicated in the metabolism of a number of pharmaceuticals, pesticides and toxicants. In man, lack of hepatic FMO-catalysed trimethylamine metabolism results in trimethylaminuria (fish odour syndrome). Five mammalian forms of FMO are now known and have been designated FMO1-FMO5 [, , , , ]. This is a recent nomenclature based on comparison of amino acid sequences, and has been introduced in an attempt to eliminate confusion inherent in multiple, laboratory-specific designations and tissue-based classifications []. Following the determination of the complete nucleotide sequence of Saccharomyces cerevisiae (Baker's yeast) [], a novel gene was found to encode a protein with similarity to mammalian monooygenases.; GO: 0004499 flavin-containing monooxygenase activity, 0050660 flavin adenine dinucleotide binding, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 2GVC_E 1VQW_B 2GV8_B 2XVI_B 2XVH_B 2XLS_A 2XLR_A 2XLU_D 2XLP_B 2XVE_A ....
Probab=99.55 E-value=3.9e-14 Score=156.52 Aligned_cols=316 Identities=13% Similarity=0.119 Sum_probs=142.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC------------cccc--------------ccc--Cc---
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ------------PMFT--------------LIG--GG--- 79 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~------------p~~~--------------~~~--~~--- 79 (706)
++|+|||||++||++|+.|.+. |++++++|+++..... +.+. ..+ .+
T Consensus 2 krVaVIGaG~sGL~a~k~l~e~--g~~~~~fE~~~~iGG~W~~~~~~~~g~~~~y~sl~~n~sk~~~~fsdfp~p~~~p~ 79 (531)
T PF00743_consen 2 KRVAVIGAGPSGLAAAKNLLEE--GLEVTCFEKSDDIGGLWRYTENPEDGRSSVYDSLHTNTSKEMMAFSDFPFPEDYPD 79 (531)
T ss_dssp -EEEEE--SHHHHHHHHHHHHT--T-EEEEEESSSSSSGGGCHSTTCCCSEGGGSTT-B-SS-GGGSCCTTS-HCCCCSS
T ss_pred CEEEEECccHHHHHHHHHHHHC--CCCCeEEecCCCCCccCeeCCcCCCCccccccceEEeeCchHhcCCCcCCCCCCCC
Confidence 6899999999999999999998 9999999998862110 0000 000 00
Q ss_pred cccCcccccccccccC-CCc-EEE--EceeEEEEcCC-------CEEEeCC-Ce--EEEecEEEEcccc--ccccCC--C
Q psy8791 80 MKKLSDSRRPMKSVLP-SGA-TWV--KDKIVSFDPEN-------NRVRTQA-GS--EISYEYMIVASGI--QMYYDR--V 141 (706)
Q Consensus 80 ~~~~~~~~~~~~~~~~-~~v-~~i--~~~v~~id~~~-------~~v~~~~-g~--~~~yd~lviAtG~--~~~~~~--~ 141 (706)
..+.+++...++.+.+ .+. +++ .++|++++... ..|++++ |+ +-.||+||+|||- .|+.|. +
T Consensus 80 f~~~~~v~~Yl~~Ya~~f~L~~~I~fnt~V~~v~~~~d~~~~~~W~V~~~~~g~~~~~~fD~VvvatG~~~~P~~P~~~~ 159 (531)
T PF00743_consen 80 FPSHSEVLEYLESYAEHFGLRKHIRFNTEVVSVERDPDFSATGKWEVTTENDGKEETEEFDAVVVATGHFSKPNIPEPSF 159 (531)
T ss_dssp SEBHHHHHHHHHHHHHHTTGGGGEETSEEEEEEEEETTTT-ETEEEEEETTTTEEEEEEECEEEEEE-SSSCESB-----
T ss_pred CCCHHHHHHHHHHHHhhhCCcceEEEccEEeEeeeccccCCCceEEEEeecCCeEEEEEeCeEEEcCCCcCCCCCChhhh
Confidence 0000111112222222 122 233 36777776422 2455543 42 4569999999994 566664 7
Q ss_pred CCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecC
Q psy8791 142 KGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFP 221 (706)
Q Consensus 142 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~ 221 (706)
||. +.|.++.+|+.+ +.+.....+|+|..+....++.++...+.... ..+.+...
T Consensus 160 ~G~--------------------e~F~G~i~HS~~----yr~~~~f~gKrVlVVG~g~Sg~DIa~el~~~a-~~v~~s~R 214 (531)
T PF00743_consen 160 PGL--------------------EKFKGEIIHSKD----YRDPEPFKGKRVLVVGGGNSGADIAVELSRVA-KKVYLSTR 214 (531)
T ss_dssp CTG--------------------GGHCSEEEEGGG------TGGGGTTSEEEEESSSHHHHHHHHHHTTTS-CCEEEECC
T ss_pred hhh--------------------hcCCeeEEcccc----CcChhhcCCCEEEEEeCCHhHHHHHHHHHHhc-CCeEEEEe
Confidence 883 357889999876 55556666779999999888888888887653 33333322
Q ss_pred CCCeee-----CChhHHHHHHHH------HHHHH----cCCCCCcEEEE------EeCCCcCCC-chhHHHHHHHHHHhC
Q psy8791 222 ATPIKC-----GGAPMKAVLIGD------EYLRK----HKKRDAAKLTY------CTGMGVLFP-SPFYAEKIHDILIGR 279 (706)
Q Consensus 222 ~~~v~~-----~g~~~~~~~~~~------~~l~~----~g~~~~~~v~l------~~~~~~~~~-~~~~~~~~~~~l~~~ 279 (706)
.....+ .|-|.+.....+ ..+.. .-......-.+ +.+....+. .+.+.+.+-..+...
T Consensus 215 ~~~wv~pr~~~~G~P~D~~~~~R~~~~l~~~lp~~~~~~~~~~~l~~~~~~~~~gl~p~~~~~~~~~~ind~l~~~i~~G 294 (531)
T PF00743_consen 215 RGAWVLPRYWDNGYPFDMVFSTRFSSFLQKNLPESLSNWLLEKKLNKRFDHENYGLKPKHRFFSQHPTINDELPNRIRSG 294 (531)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 211111 122322211100 00000 00000000000 011111111 244556666677777
Q ss_pred CceEEcCCceEEEeCCCCEEEEEeCCCceEE-eecEEEECCCCCch-hhhhcCCCCCCCCceeeCccccccC--CCCCEE
Q psy8791 280 GVDVHKGKALVEIDLANKEAVFKSEDKTERL-PYAIMHVTPPMGPV-PELATSRLVDQSGYVNVDKATLQHV--KYSNVF 355 (706)
Q Consensus 280 gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i-~~D~vI~a~G~~~~-~~~~~~~l~~~~G~i~vd~~~l~~~--~~~~If 355 (706)
.|.+.. .|.+++++ .+.++ ||+++ ++|.||+|||++.. +++.+.-+...++.+..-.+.+ .+ .+|++.
T Consensus 295 ~i~vk~--~I~~~~~~--~v~F~---DGs~~e~vD~II~~TGY~~~fpFL~~~~~~~~~~~~~LYk~vf-p~~~~~ptLa 366 (531)
T PF00743_consen 295 RIKVKP--DIKRFTEN--SVIFE---DGSTEEDVDVIIFCTGYKFSFPFLDESLIKVDDNRVRLYKHVF-PPNLDHPTLA 366 (531)
T ss_dssp ----EE---EEEE-SS--EEEET---TSEEEEE-SEEEE---EE---TTB-TTTT-S-SSSSSEETTTE-ETETTSTTEE
T ss_pred cccccc--cccccccc--ccccc---ccccccccccccccccccccccccccccccccccccccccccc-cccccccccc
Confidence 777764 48888764 37664 78775 79999999999988 7776653333333333322222 12 458999
Q ss_pred EccccCCCCCCchHHHHHHhHHHHHHHH
Q psy8791 356 AIGDCSNLPTSKTAAAVAGQCKVVYDNL 383 (706)
Q Consensus 356 a~GD~~~~~~~~~~~~a~~qg~~~a~ni 383 (706)
.+|=+-.. ......+..||+.+|+-+
T Consensus 367 fIG~~~~~--g~~fp~~ElQArw~a~v~ 392 (531)
T PF00743_consen 367 FIGLVQPF--GSIFPIFELQARWAARVF 392 (531)
T ss_dssp ESS-SBSS--S-HHHHHHHHHHHHHHHH
T ss_pred cccccccc--cccccccccccccccccc
Confidence 99943221 123345788888888766
No 100
>TIGR01424 gluta_reduc_2 glutathione-disulfide reductase, plant. The tripeptide glutathione is an important reductant, e.g., for maintaining the cellular thiol/disulfide status and for protecting against reactive oxygen species such as hydrogen peroxide. Glutathione-disulfide reductase regenerates reduced glutathione from oxidized glutathione (glutathione disulfide) + NADPH. This model represents one of two closely related subfamilies of glutathione-disulfide reductase. Both are closely related to trypanothione reductase, and separate models are built so each of the three can describe proteins with conserved function. This model describes glutathione-disulfide reductases of plants and some bacteria, including cyanobacteria.
Probab=99.55 E-value=3.6e-15 Score=163.83 Aligned_cols=181 Identities=15% Similarity=0.143 Sum_probs=110.5
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccc-ccc
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKI-VSF 545 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~ 545 (706)
.|||+|||||+||++||.+++++ +.+|+|||++. .||.|. +..|.|.|.|+.+...+..... ..+
T Consensus 2 ~yDvvVIG~GpaG~~aA~~aa~~--G~~V~lie~~~-----------~GG~c~-~~gciPsk~l~~~a~~~~~~~~~~~~ 67 (446)
T TIGR01424 2 DYDLFVIGAGSGGVRAARLAANH--GAKVAIAEEPR-----------VGGTCV-IRGCVPKKLMVYGSTFGGEFEDAAGY 67 (446)
T ss_pred cccEEEECCCHHHHHHHHHHHhC--CCcEEEEecCc-----------cCceee-cCCcCchHHHHHHHHHHHHHhhhHhc
Confidence 47999999999999999999998 89999999732 244443 4556788777666533221110 000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCcEEe
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGSEIS 623 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~~i~ 623 (706)
. +.. +. ....|..+... ....+.+...+...++ .||+++.+++..+|++...|. .+|+++.
T Consensus 68 g--~~~---------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~g~~~~v~~~~v~v~-~~g~~~~ 130 (446)
T TIGR01424 68 G--WTV---------GK-----ARFDWKKLLQKKDDEIARLSGLYKRLLANAGVELLEGRARLVGPNTVEVL-QDGTTYT 130 (446)
T ss_pred C--cCC---------CC-----CCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEecCCEEEEe-cCCeEEE
Confidence 0 000 00 00000000000 0011112222333333 699999999999998744443 4677899
Q ss_pred eCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 624 YEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 624 yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
||+||||||++|..|++||.+... +..........+++++|| |+|+|..++++..
T Consensus 131 ~d~lIiATGs~p~~p~i~G~~~~~----------~~~~~~~l~~~~~~vvVIGgG~~g~E~A~~l~~~G~ 190 (446)
T TIGR01424 131 AKKILIAVGGRPQKPNLPGHELGI----------TSNEAFHLPTLPKSILILGGGYIAVEFAGIWRGLGV 190 (446)
T ss_pred cCEEEEecCCcCCCCCCCCcccee----------chHHhhcccccCCeEEEECCcHHHHHHHHHHHHcCC
Confidence 999999999999999999965211 111111222357899999 8999988876643
No 101
>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional
Probab=99.55 E-value=6.9e-15 Score=161.49 Aligned_cols=170 Identities=21% Similarity=0.216 Sum_probs=105.9
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
+.|||||||||+||++||..++++ +.+|+|||+++... ||+|. +..|.|.|.++......
T Consensus 2 ~~~dvvVIG~GpaG~~aA~~l~~~--g~~V~liE~~~~~~---------GG~c~-~~gciP~k~~~~~~~~~-------- 61 (438)
T PRK07251 2 LTYDLIVIGFGKAGKTLAAKLASA--GKKVALVEESKAMY---------GGTCI-NIGCIPTKTLLVAAEKN-------- 61 (438)
T ss_pred CccCEEEECCCHHHHHHHHHHHhC--CCEEEEEecCCccc---------ceeee-cCccccchHhhhhhhcC--------
Confidence 468999999999999999999997 78999999875421 44432 23345665555433100
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccc-cccccccch-hhhccCCcEEEeceEEEEEcCCCeEEcCC---Cc
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMK-KLSDSRRPM-KSVLPSGATWVKDKIVSFDPENNRVRTQA---GS 620 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~gv~~~~~~v~~id~~~~~V~~~~---g~ 620 (706)
..+..+..... -...+.... ..+.+.+|+++.+++.+++. ++|.+.+ ..
T Consensus 62 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~--~~v~v~~~~~~~ 115 (438)
T PRK07251 62 ------------------------LSFEQVMATKNTVTSRLRGKNYAMLAGSGVDLYDAEAHFVSN--KVIEVQAGDEKI 115 (438)
T ss_pred ------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccC--CEEEEeeCCCcE
Confidence 00000000000 001111111 22233699999999888754 4565533 24
Q ss_pred EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 621 EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 621 ~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
++.||+||||||++|+.|++||.++. . ...++.........+++|+|| |+|+|..++++..
T Consensus 116 ~~~~d~vViATGs~~~~p~i~G~~~~-~------~v~~~~~~~~~~~~~~~vvIIGgG~~g~e~A~~l~~~g~ 181 (438)
T PRK07251 116 ELTAETIVINTGAVSNVLPIPGLADS-K------HVYDSTGIQSLETLPERLGIIGGGNIGLEFAGLYNKLGS 181 (438)
T ss_pred EEEcCEEEEeCCCCCCCCCCCCcCCC-C------cEEchHHHhcchhcCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 79999999999999999999997521 1 122222222333467899999 9999999877653
No 102
>PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated
Probab=99.54 E-value=1.2e-13 Score=156.93 Aligned_cols=110 Identities=15% Similarity=0.251 Sum_probs=66.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC--------------CcccCcccccc----cCccccCcccc--
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD--------------DHYYQPMFTLI----GGGMKKLSDSR-- 87 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~--------------~~~~~p~~~~~----~~~~~~~~~~~-- 87 (706)
...++|+|||||||||+||++|+++ |++|||+|+.+ ++.|.|.+... .+|.....-..
T Consensus 381 ~tgKKVaVVGaGPAGLsAA~~La~~--Gh~Vtv~E~~~i~gl~~~~~~~i~~~~~~~~~L~er~p~~~GG~~~yGIp~R~ 458 (1028)
T PRK06567 381 PTNYNILVTGLGPAGFSLSYYLLRS--GHNVTAIDGLKITLLPFDVHKPIKFWHEYKNLLSERMPRGFGGVAEYGITVRW 458 (1028)
T ss_pred CCCCeEEEECcCHHHHHHHHHHHhC--CCeEEEEccccccccccccccccchhhhhccchhhhccccCCcccccCccccc
Confidence 4568999999999999999999998 99999999853 23344443321 11222111110
Q ss_pred -----cccccccCC--CcEEEEceeEEEEcCCCEEEeCCCeEEEecEEEEcccc-ccccCCCCCC
Q psy8791 88 -----RPMKSVLPS--GATWVKDKIVSFDPENNRVRTQAGSEISYEYMIVASGI-QMYYDRVKGP 144 (706)
Q Consensus 88 -----~~~~~~~~~--~v~~i~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~-~~~~~~~~g~ 144 (706)
.....++.. ++++..+...+.| ++.++-....||++++|||+ .+..+++||.
T Consensus 459 ~k~~l~~i~~il~~g~~v~~~~gv~lG~d-----it~edl~~~gyDAV~IATGA~kpr~L~IPGe 518 (1028)
T PRK06567 459 DKNNLDILRLILERNNNFKYYDGVALDFN-----ITKEQAFDLGFDHIAFCIGAGQPKVLDIENF 518 (1028)
T ss_pred hHHHHHHHHHHHhcCCceEEECCeEECcc-----CCHHHHhhcCCCEEEEeCCCCCCCCCCCCCc
Confidence 011122222 3444444332222 22222224579999999999 6888999993
No 103
>PRK06116 glutathione reductase; Validated
Probab=99.54 E-value=4.1e-15 Score=163.89 Aligned_cols=182 Identities=14% Similarity=0.163 Sum_probs=108.9
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
..|||+|||||+||++||..++++ +.+|+|||++. .||.| ++..|.|.|.|+..............
T Consensus 3 ~~~DvvVIG~GpaG~~aA~~~a~~--G~~V~liE~~~-----------~GG~c-~n~gciP~k~l~~~~~~~~~~~~~~~ 68 (450)
T PRK06116 3 KDYDLIVIGGGSGGIASANRAAMY--GAKVALIEAKR-----------LGGTC-VNVGCVPKKLMWYGAQIAEAFHDYAP 68 (450)
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeccc-----------hhhhh-hccCcchHHHHHHHHHHHHHHHhHHH
Confidence 468999999999999999999998 88999999742 24444 34555777766554321110000000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCcEEe
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGSEIS 623 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~~i~ 623 (706)
..++.. ... ...|..+... ....+.+...+...+. .||+++.++++.+|+ ++|++ +|++++
T Consensus 69 ~~g~~~----------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~g~~~~v~~--~~v~~-~g~~~~ 131 (450)
T PRK06116 69 GYGFDV----------TEN----KFDWAKLIANRDAYIDRLHGSYRNGLENNGVDLIEGFARFVDA--HTVEV-NGERYT 131 (450)
T ss_pred hcCCCC----------CCC----CcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccC--CEEEE-CCEEEE
Confidence 000000 000 0000000000 0001112222233333 699999999999985 46766 677899
Q ss_pred eCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 624 YEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 624 yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
||+||||||++|..|++||.+... +......+...+++++|| |+|+|..|+++..
T Consensus 132 ~d~lViATGs~p~~p~i~g~~~~~----------~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~ 191 (450)
T PRK06116 132 ADHILIATGGRPSIPDIPGAEYGI----------TSDGFFALEELPKRVAVVGAGYIAVEFAGVLNGLGS 191 (450)
T ss_pred eCEEEEecCCCCCCCCCCCcceeE----------chhHhhCccccCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 999999999999999999975211 111111223457899999 8999988876643
No 104
>KOG0405|consensus
Probab=99.53 E-value=1.8e-14 Score=141.62 Aligned_cols=189 Identities=16% Similarity=0.175 Sum_probs=123.0
Q ss_pred ccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccc
Q psy8791 464 FRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIV 543 (706)
Q Consensus 464 ~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~ 543 (706)
..+.+|+++||||.+|+++|++.++. +.++.|+|.. +..+.+|+..||.+ |++|.....+...-..
T Consensus 17 ~~k~fDylvIGgGSGGvasARrAa~~--GAkv~l~E~~----f~lGGTCVn~GCVP--------KKvm~~~a~~~~~~~d 82 (478)
T KOG0405|consen 17 DVKDFDYLVIGGGSGGVASARRAASH--GAKVALCELP----FGLGGTCVNVGCVP--------KKVMWYAADYSEEMED 82 (478)
T ss_pred cccccceEEEcCCcchhHHhHHHHhc--CceEEEEecC----CCcCceEEeecccc--------ceeEEehhhhhHHhhh
Confidence 34579999999999999999999998 8999999862 23344555555544 4554444333222111
Q ss_pred ccCCCceEEEeeecceecCCCcccccCccccccccc-ccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCc-
Q psy8791 544 SFDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGM-KKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGS- 620 (706)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~- 620 (706)
+..+++.. +.... +.|+.+.... .+...+.--|...+. .+|+++.+++.++++.+-+|...||+
T Consensus 83 a~~yG~~~---------~~~~~----fdW~~ik~krdayi~RLngIY~~~L~k~~V~~i~G~a~f~~~~~v~V~~~d~~~ 149 (478)
T KOG0405|consen 83 AKDYGFPI---------NEEGS----FDWKVIKQKRDAYILRLNGIYKRNLAKAAVKLIEGRARFVSPGEVEVEVNDGTK 149 (478)
T ss_pred hhhcCCcc---------ccccC----CcHHHHHhhhhHHHHHHHHHHHhhccccceeEEeeeEEEcCCCceEEEecCCee
Confidence 11111111 00000 1111111100 011111122333333 58999999999999998888888884
Q ss_pred -EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 621 -EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 621 -~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
.+.+.+++||||++|.+|.|||.+-. .++...++++..||+++|+ ++|+|+.++.+..+
T Consensus 150 ~~Ytak~iLIAtGg~p~~PnIpG~E~g----------idSDgff~Lee~Pkr~vvvGaGYIavE~Agi~~gLgse 214 (478)
T KOG0405|consen 150 IVYTAKHILIATGGRPIIPNIPGAELG----------IDSDGFFDLEEQPKRVVVVGAGYIAVEFAGIFAGLGSE 214 (478)
T ss_pred EEEecceEEEEeCCccCCCCCCchhhc----------cccccccchhhcCceEEEEccceEEEEhhhHHhhcCCe
Confidence 37899999999999999999998722 2344566677899999999 99999999988754
No 105
>PRK06370 mercuric reductase; Validated
Probab=99.52 E-value=1.1e-14 Score=161.09 Aligned_cols=186 Identities=15% Similarity=0.156 Sum_probs=111.2
Q ss_pred ccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccc
Q psy8791 464 FRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIV 543 (706)
Q Consensus 464 ~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~ 543 (706)
+|.+|||||||+|+||++||.++++. +.+|+|||+.. . ||.| ++..|.|.|.|+............
T Consensus 2 ~~~~~DvvVIG~GpaG~~aA~~aa~~--G~~v~lie~~~----------~-GG~c-~~~gciPsk~l~~~a~~~~~~~~~ 67 (463)
T PRK06370 2 PAQRYDAIVIGAGQAGPPLAARAAGL--GMKVALIERGL----------L-GGTC-VNTGCVPTKTLIASARAAHLARRA 67 (463)
T ss_pred CCccccEEEECCCHHHHHHHHHHHhC--CCeEEEEecCc----------c-CCce-eccccCcHHHHHHHHHHHHHHHHH
Confidence 45679999999999999999999998 88999999742 1 3333 245567777766654222111100
Q ss_pred ccCCCceEEEeeecceecCCCcccccCcccccccccc-cccccccchhhhcc-C-CcEEEeceEEEEEcCCCeEEcCCCc
Q psy8791 544 SFDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMK-KLSDSRRPMKSVLP-S-GATWVKDKIVSFDPENNRVRTQAGS 620 (706)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~-gv~~~~~~v~~id~~~~~V~~~~g~ 620 (706)
.. .++.. .. .....+..+..... ..+.+...+...++ . ||+++.+++..++ .++|.+ +++
T Consensus 68 ~~-~g~~~----------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~g~~~~~~--~~~v~v-~~~ 130 (463)
T PRK06370 68 AE-YGVSV----------GG---PVSVDFKAVMARKRRIRARSRHGSEQWLRGLEGVDVFRGHARFES--PNTVRV-GGE 130 (463)
T ss_pred Hh-cCccc----------Cc---cCccCHHHHHHHHHHHHHHHHHhHHHHHhcCCCcEEEEEEEEEcc--CCEEEE-CcE
Confidence 00 00000 00 00000000000000 00111122333333 4 8999988887765 456666 456
Q ss_pred EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 621 EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 621 ~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
++.||+||||||++|..|++||.+.. .+.+..........+++++|| |+|+|..++++..
T Consensus 131 ~~~~d~lViATGs~p~~p~i~G~~~~--------~~~~~~~~~~~~~~~~~vvVIGgG~~g~E~A~~l~~~G~ 195 (463)
T PRK06370 131 TLRAKRIFINTGARAAIPPIPGLDEV--------GYLTNETIFSLDELPEHLVIIGGGYIGLEFAQMFRRFGS 195 (463)
T ss_pred EEEeCEEEEcCCCCCCCCCCCCCCcC--------ceEcchHhhCccccCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 89999999999999999999997631 122222222233457899999 9999998877654
No 106
>PTZ00058 glutathione reductase; Provisional
Probab=99.52 E-value=1.3e-14 Score=161.41 Aligned_cols=182 Identities=17% Similarity=0.210 Sum_probs=111.6
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
.|||+|||||+||++||..+.+. +.+|+|||++. .||+| ++..|.|.|.|+..+.........
T Consensus 48 ~yDvvVIG~G~aG~~aA~~aa~~--G~~ValIEk~~-----------~GGtC-ln~GCiPsK~l~~~a~~~~~~~~~--- 110 (561)
T PTZ00058 48 VYDLIVIGGGSGGMAAARRAARN--KAKVALVEKDY-----------LGGTC-VNVGCVPKKIMFNAASIHDILENS--- 110 (561)
T ss_pred cccEEEECcCHHHHHHHHHHHHc--CCeEEEEeccc-----------ccccc-cccCCCCCchhhhhcccHHHHHHH---
Confidence 47999999999999999999998 88999999742 24444 345567888888776433211100
Q ss_pred CCceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc-CCcEEEeceEEEEEcCCCe-----------
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNR----------- 613 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~----------- 613 (706)
..+.+ +... ...+..+... ....+.+...+...++ .||+++.+++.++++..-.
T Consensus 111 ~~~Gi---------~~~~----~~d~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~G~a~f~~~~~v~v~~~~~~~~~~ 177 (561)
T PTZ00058 111 RHYGF---------DTQF----SFNLPLLVERRDKYIRRLNDIYRQNLKKDNVEYFEGKGSLLSENQVLIKKVSQVDGEA 177 (561)
T ss_pred HhcCC---------CccC----ccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEecCCEEEeeccccccccc
Confidence 00000 0000 0001111000 0011122233334444 6999999999888754322
Q ss_pred ---------E------EcCCCcEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE---
Q psy8791 614 ---------V------RTQAGSEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV--- 675 (706)
Q Consensus 614 ---------V------~~~~g~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi--- 675 (706)
| .+++|+++.||+||||||++|..|++||.+..+ +........ .+++++||
T Consensus 178 ~~~~~~~~~v~~~~~~~~~~g~~i~ad~lVIATGS~P~~P~IpG~~~v~----------ts~~~~~l~-~pk~VvIIGgG 246 (561)
T PTZ00058 178 DESDDDEVTIVSAGVSQLDDGQVIEGKNILIAVGNKPIFPDVKGKEFTI----------SSDDFFKIK-EAKRIGIAGSG 246 (561)
T ss_pred cccccccceeeeccceecCCCcEEECCEEEEecCCCCCCCCCCCceeEE----------EHHHHhhcc-CCCEEEEECCc
Confidence 2 134677899999999999999999999964111 111111222 37899999
Q ss_pred --cHHHHHHHHHHHhh
Q psy8791 676 --SPEIRAKAYDLTKR 689 (706)
Q Consensus 676 --G~E~A~~l~~~~~~ 689 (706)
|+|+|..++++..+
T Consensus 247 ~iGlE~A~~l~~~G~~ 262 (561)
T PTZ00058 247 YIAVELINVVNRLGAE 262 (561)
T ss_pred HHHHHHHHHHHHcCCc
Confidence 99999999877654
No 107
>COG0493 GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only]
Probab=99.51 E-value=7.7e-14 Score=149.97 Aligned_cols=299 Identities=14% Similarity=0.064 Sum_probs=171.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCcccccccccccCCCcEEEEceeEEEE
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 109 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~v~~id 109 (706)
.++|.|||||||||+||..|++. +++||++|+.+.....- ...++......+.+...+..+.+.+++|........|
T Consensus 123 g~~VaviGaGPAGl~~a~~L~~~--G~~Vtv~e~~~~~GGll-~yGIP~~kl~k~i~d~~i~~l~~~Gv~~~~~~~vG~~ 199 (457)
T COG0493 123 GKKVAVIGAGPAGLAAADDLSRA--GHDVTVFERVALDGGLL-LYGIPDFKLPKDILDRRLELLERSGVEFKLNVRVGRD 199 (457)
T ss_pred CCEEEEECCCchHhhhHHHHHhC--CCeEEEeCCcCCCceeE-EecCchhhccchHHHHHHHHHHHcCeEEEEcceECCc
Confidence 38999999999999999999999 99999999998632110 1112222222223334455555678888775443322
Q ss_pred cCCCEEEeCCCeEEEecEEEEcccc-ccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCC
Q psy8791 110 PENNRVRTQAGSEISYEYMIVASGI-QMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQP 188 (706)
Q Consensus 110 ~~~~~v~~~~g~~~~yd~lviAtG~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 188 (706)
++++.- .-.||++++|+|+ .++...+||.+ +.|. ..+++
T Consensus 200 -----it~~~L-~~e~Dav~l~~G~~~~~~l~i~g~d----~~gv----------------------------~~A~d-- 239 (457)
T COG0493 200 -----ITLEEL-LKEYDAVFLATGAGKPRPLDIPGED----AKGV----------------------------AFALD-- 239 (457)
T ss_pred -----CCHHHH-HHhhCEEEEeccccCCCCCCCCCcC----CCcc----------------------------hHHHH--
Confidence 222221 2357999999996 56777788832 1110 00000
Q ss_pred CCCcccCCChhHHHHHHHHHHh-ccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCC-C--cCCC
Q psy8791 189 DSGVSTNYSPQYVEKTLRNLQH-FQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGM-G--VLFP 264 (706)
Q Consensus 189 ~~~v~~~~~~~~~~~~~~~l~~-~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~-~--~~~~ 264 (706)
-..+....... ..........+...++++|+...+ .++ ....+.|.. .++.+.+. . ...+
T Consensus 240 -----------fL~~~~~~~~~~~~~~~~~~~~gk~vvVIGgG~Ta~-D~~-~t~~r~Ga~---~v~~~~~~~~~~~~~~ 303 (457)
T COG0493 240 -----------FLTRLNKEVLGDFAEDRTPPAKGKRVVVIGGGDTAM-DCA-GTALRLGAK---SVTCFYREDRDDETNE 303 (457)
T ss_pred -----------HHHHHHHHHhcccccccCCCCCCCeEEEECCCCCHH-HHH-HHHhhcCCe---EEEEeccccccccCCc
Confidence 00011111111 000001111112333444442211 112 223344432 35544311 1 1111
Q ss_pred -chhHHHHHHHHHHhCCceEEcCCceEEEeC-CCCEEEEE---eC------------------CCceEEeecEEEECCCC
Q psy8791 265 -SPFYAEKIHDILIGRGVDVHKGKALVEIDL-ANKEAVFK---SE------------------DKTERLPYAIMHVTPPM 321 (706)
Q Consensus 265 -~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~-~~~~v~~~---~~------------------~~g~~i~~D~vI~a~G~ 321 (706)
+........+...+.|+.........++.. ++++|... .. .+..++++|+|+.++|+
T Consensus 304 ~~~~~~~~~~~~a~eeg~~~~~~~~~~~~~~~e~GrV~~~~~~~~~~~~~~~~~~r~~p~~v~gs~~~~~aD~v~~aig~ 383 (457)
T COG0493 304 WPTWAAQLEVRSAGEEGVERLPFVQPKAFIGNEGGRVTGVKFGRVEPGEYVDGWGRRGPVGVIGTEKTDAADTVILAIGF 383 (457)
T ss_pred ccccchhhhhhhhhhcCCcccccCCceeEeecCCCcEeeeecccccccCcccccccccCccccCceEEehHHHHHHHhcc
Confidence 122344455667778888887776666664 33333311 10 12246789999999999
Q ss_pred Cchhhh--h-cCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHH-HHHcCC
Q psy8791 322 GPVPEL--A-TSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLS-AVMKNR 390 (706)
Q Consensus 322 ~~~~~~--~-~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~-~~l~g~ 390 (706)
.++... . ..++ .+..|.+.+++ .++.|+.|++||.||+.... .+...|+.+|+.+|+.|. ..+.+.
T Consensus 384 ~~~~~~~~~~~~~~~~~~~g~i~~~~-~~~~ts~~~vfa~gD~~~g~--~~vv~ai~eGr~aak~i~~~~l~~~ 454 (457)
T COG0493 384 EGDATDGLLLEFGLKLDKRGRIKVDE-NLQQTSIPGVFAGGDAVRGA--ALVVWAIAEGREAAKAIDKELLLGK 454 (457)
T ss_pred CCCcccccccccccccCCCCceeccc-ccccccCCCeeeCceeccch--hhhhhHHhhchHHHHhhhHHHHhhc
Confidence 998322 2 2245 77889999998 56459999999999999973 477789999999999998 555443
No 108
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional
Probab=99.51 E-value=1.4e-14 Score=160.35 Aligned_cols=188 Identities=15% Similarity=0.155 Sum_probs=110.1
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
+++|||+|||||+||+++|..+.+. +.+|+|||+++.. ||.|. +..+.|.|.|..............
T Consensus 3 ~~~yDvvVIGaGpaG~~aA~~la~~--G~~v~liE~~~~~----------GG~~~-~~gcipsk~l~~~~~~~~~~~~~~ 69 (461)
T PRK05249 3 MYDYDLVVIGSGPAGEGAAMQAAKL--GKRVAVIERYRNV----------GGGCT-HTGTIPSKALREAVLRLIGFNQNP 69 (461)
T ss_pred CccccEEEECCCHHHHHHHHHHHhC--CCEEEEEeccccc----------ccccc-ccCCCCHHHHHHHHHHHHHHhhhh
Confidence 4578999999999999999999998 7899999985432 44443 223456554433221110000000
Q ss_pred cCCCceEEEeeecceecCCCcccccCcccccccccc-cccccccchhhhc-cCCcEEEeceEEEEEcCCCeEEcCCCc--
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMK-KLSDSRRPMKSVL-PSGATWVKDKIVSFDPENNRVRTQAGS-- 620 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~gv~~~~~~v~~id~~~~~V~~~~g~-- 620 (706)
....+.. .....+..+..... ..+.+...+...+ +.+++++.+++..+|.+..+|...+|+
T Consensus 70 ~~~~~~~---------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~ 134 (461)
T PRK05249 70 LYSSYRV---------------KLRITFADLLARADHVINKQVEVRRGQYERNRVDLIQGRARFVDPHTVEVECPDGEVE 134 (461)
T ss_pred hhcccCC---------------cCccCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCEEEEEeCCCceE
Confidence 0000000 00000000000000 0001111122222 268999999999998876667766664
Q ss_pred EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 621 EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 621 ~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
++.||+||||||++|..|++++.+. . ...+..........+++++|| |+|+|..++++..
T Consensus 135 ~~~~d~lviATGs~p~~p~~~~~~~--~------~v~~~~~~~~~~~~~~~v~IiGgG~~g~E~A~~l~~~g~ 199 (461)
T PRK05249 135 TLTADKIVIATGSRPYRPPDVDFDH--P------RIYDSDSILSLDHLPRSLIIYGAGVIGCEYASIFAALGV 199 (461)
T ss_pred EEEcCEEEEcCCCCCCCCCCCCCCC--C------eEEcHHHhhchhhcCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 7999999999999999888777531 1 122222233334468999999 8999999887654
No 109
>PRK13748 putative mercuric reductase; Provisional
Probab=99.50 E-value=1.2e-14 Score=164.74 Aligned_cols=187 Identities=16% Similarity=0.201 Sum_probs=112.7
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
.|||||||||+||+++|..+++. +.+|+|||++. .||.|. +..|.|.|.|+.+...........+.
T Consensus 98 ~~DvvVIG~GpaG~~aA~~~~~~--G~~v~lie~~~-----------~GG~c~-n~gciPsk~l~~~~~~~~~~~~~~~~ 163 (561)
T PRK13748 98 PLHVAVIGSGGAAMAAALKAVEQ--GARVTLIERGT-----------IGGTCV-NVGCVPSKIMIRAAHIAHLRRESPFD 163 (561)
T ss_pred CCCEEEECcCHHHHHHHHHHHhC--CCeEEEEecCc-----------ceeecc-ccCccccHHHHHHHHHHHHHhccccc
Confidence 48999999999999999999998 78999999752 134433 34557877776654221111000000
Q ss_pred CCceEEEeeecceecCCCcccccCcccccccccc-ccccccc-chhhhcc-C-CcEEEeceEEEEEcCCCeEEcCCCc--
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMK-KLSDSRR-PMKSVLP-S-GATWVKDKIVSFDPENNRVRTQAGS-- 620 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~-~-gv~~~~~~v~~id~~~~~V~~~~g~-- 620 (706)
.++... .+. ..+..+..... ..+.+.. .+...+. . +|++++++++++|++...|.+.+|+
T Consensus 164 ~g~~~~--------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~ 229 (561)
T PRK13748 164 GGIAAT--------VPT------IDRSRLLAQQQARVDELRHAKYEGILDGNPAITVLHGEARFKDDQTLIVRLNDGGER 229 (561)
T ss_pred CCccCC--------CCc------cCHHHHHHHHHHHHHHHhcccHHHHHhccCCeEEEEEEEEEecCCEEEEEeCCCceE
Confidence 000000 000 00000000000 0011111 1223333 3 8999999999999876677766663
Q ss_pred EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 621 EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 621 ~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
+++||+||||||++|..|++||.+.. .+.+..........+++++|| |+|+|..|+++..+
T Consensus 230 ~~~~d~lviAtGs~p~~p~i~g~~~~--------~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~ 295 (561)
T PRK13748 230 VVAFDRCLIATGASPAVPPIPGLKET--------PYWTSTEALVSDTIPERLAVIGSSVVALELAQAFARLGSK 295 (561)
T ss_pred EEEcCEEEEcCCCCCCCCCCCCCCcc--------ceEccHHHhhcccCCCeEEEECCCHHHHHHHHHHHHcCCE
Confidence 69999999999999999999997531 111111222223457899999 99999999877654
No 110
>TIGR02053 MerA mercuric reductase. This model represents the mercuric reductase found in the mer operon for the detoxification of mercury compounds. MerA is a FAD-containing flavoprotein which reduces Hg(II) to Hg(0) utilizing NADPH.
Probab=99.50 E-value=2.6e-14 Score=158.05 Aligned_cols=181 Identities=17% Similarity=0.234 Sum_probs=110.6
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDS 547 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 547 (706)
|||||||||+||+++|.+++++ +.+|+|||+++ + ||.| ++..|.|.|.|+.....+.......
T Consensus 1 yDvvVIGaGpaG~~aA~~aa~~--g~~v~lie~~~----------~-GG~c-~n~gciPsk~l~~~~~~~~~~~~~~--- 63 (463)
T TIGR02053 1 YDLVIIGSGAAAFAAAIKAAEL--GASVAMVERGP----------L-GGTC-VNVGCVPSKMLLRAAEVAHYARKPP--- 63 (463)
T ss_pred CCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCc----------c-cCCe-eeecEEccHHHHHHHHHHHHhhccC---
Confidence 6899999999999999999998 88999999853 1 3433 3455678887776543221111000
Q ss_pred CceEEEeeecceecCCCcccccCccccccccccc-cccccc-chhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCc-EEe
Q psy8791 548 SYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKK-LSDSRR-PMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGS-EIS 623 (706)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~-~i~ 623 (706)
+.+. ... ....+..+...... .+.+.. .+...++ .+|+++.+++.++|. ++|.+.+|+ .+.
T Consensus 64 -~g~~--------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~g~~~~~~~--~~v~v~~g~~~~~ 128 (463)
T TIGR02053 64 -FGGL--------AAT----VAVDFGELLEGKREVVEELRHEKYEDVLSSYGVDYLRGRARFKDP--KTVKVDLGREVRG 128 (463)
T ss_pred -cccc--------cCC----CccCHHHHHHHHHHHHHHHhhhhHHHHHHhCCcEEEEEEEEEccC--CEEEEcCCeEEEE
Confidence 0000 000 00011111111111 011111 1223333 689999999988764 577777653 689
Q ss_pred eCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 624 YEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 624 yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
||+||||||++|..|++||.+.. . +.+..........+++++|| |+|+|..|+++..
T Consensus 129 ~~~lIiATGs~p~~p~i~G~~~~--~------~~~~~~~~~~~~~~~~vvIIGgG~~g~E~A~~l~~~g~ 190 (463)
T TIGR02053 129 AKRFLIATGARPAIPPIPGLKEA--G------YLTSEEALALDRIPESLAVIGGGAIGVELAQAFARLGS 190 (463)
T ss_pred eCEEEEcCCCCCCCCCCCCcccC--c------eECchhhhCcccCCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 99999999999999999997632 1 22222222223356899999 8999998887654
No 111
>PLN02546 glutathione reductase
Probab=99.49 E-value=1.5e-14 Score=161.01 Aligned_cols=190 Identities=15% Similarity=0.160 Sum_probs=114.0
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccc-ccc
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKI-VSF 545 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~ 545 (706)
.|||+|||+|+||+.+|..++++ +.+|+|||+.-.-. .-.-..-.||.| ++..|+|.|.|+..+........ ..+
T Consensus 79 ~yDvvVIG~GpaG~~aA~~aa~~--G~~V~liE~~~~~~-~~~~~~~~GGtC-~n~GCiPsK~l~~aa~~~~~~~~~~~~ 154 (558)
T PLN02546 79 DFDLFTIGAGSGGVRASRFASNF--GASAAVCELPFATI-SSDTLGGVGGTC-VLRGCVPKKLLVYASKYSHEFEESRGF 154 (558)
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCeEEEEecccccc-ccccCCCccCcc-cCcchHHHHHHHHHHHHHHHHHhhhhc
Confidence 47999999999999999999998 89999999520000 000000123333 35666788887766533221110 000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCcEEe
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGSEIS 623 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~~i~ 623 (706)
+ +.. +.. ....|..+... ....+++...+...++ .||+++.++++++|++ +|.+ +|+++.
T Consensus 155 g--~~~---------~~~----~~~d~~~~~~~k~~~~~~l~~~~~~~l~~~gV~~i~G~a~~vd~~--~V~v-~G~~~~ 216 (558)
T PLN02546 155 G--WKY---------ETE----PKHDWNTLIANKNAELQRLTGIYKNILKNAGVTLIEGRGKIVDPH--TVDV-DGKLYT 216 (558)
T ss_pred C--ccc---------CCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEccCC--EEEE-CCEEEE
Confidence 0 000 000 00011111110 1112223334444444 6999999999999985 5655 577899
Q ss_pred eCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 624 YEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 624 yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
||+||||||++|..|++||.+... +..........+++|+|| |+|+|..|+++..
T Consensus 217 ~D~LVIATGs~p~~P~IpG~~~v~----------~~~~~l~~~~~~k~V~VIGgG~iGvE~A~~L~~~g~ 276 (558)
T PLN02546 217 ARNILIAVGGRPFIPDIPGIEHAI----------DSDAALDLPSKPEKIAIVGGGYIALEFAGIFNGLKS 276 (558)
T ss_pred CCEEEEeCCCCCCCCCCCChhhcc----------CHHHHHhccccCCeEEEECCCHHHHHHHHHHHhcCC
Confidence 999999999999999999975211 111222233467899999 9999999887654
No 112
>TIGR01438 TGR thioredoxin and glutathione reductase selenoprotein. This homodimeric, FAD-containing member of the pyridine nucleotide disulfide oxidoreductase family contains a C-terminal motif Cys-SeCys-Gly, where SeCys is selenocysteine encoded by TGA (in some sequence reports interpreted as a stop codon). In some members of this subfamily, Cys-SeCys-Gly is replaced by Cys-Cys-Gly. The reach of the selenium atom at the C-term arm of the protein is proposed to allow broad substrate specificity.
Probab=99.49 E-value=2.7e-14 Score=157.57 Aligned_cols=195 Identities=14% Similarity=0.118 Sum_probs=113.8
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
.|||||||+|+||+.+|.++++. +.+|++||+...-.... ....||.| ++..|.|.|.|+.++.........
T Consensus 2 ~yDvvVIG~G~aG~~aA~~aa~~--G~~v~lie~~~~~~~~~--~~~~GGtc-~n~GCiPsK~l~~~a~~~~~~~~~--- 73 (484)
T TIGR01438 2 DYDLIVIGGGSGGLAAAKEAADY--GAKVMLLDFVTPTPLGT--RWGIGGTC-VNVGCIPKKLMHQAALLGQALKDS--- 73 (484)
T ss_pred ccCEEEECCCHHHHHHHHHHHHC--CCeEEEEeccCCCCCCc--ceeccccc-cccCcCchhHHHHHHHHHHHHhhh---
Confidence 37999999999999999999998 88999999632100000 00124443 456667888777665322111100
Q ss_pred CCceEEEeeecceecCCCcccccCccccccccc-ccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCC--cEE
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGGM-KKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAG--SEI 622 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g--~~i 622 (706)
..+.+. ..... ...|..+.... ...+.+...+...++ .||+++++++.++|++...|...+| +++
T Consensus 74 ~~~g~~-------~~~~~----~~d~~~~~~~~~~~v~~~~~~~~~~~~~~~v~~i~G~a~f~~~~~v~v~~~~g~~~~~ 142 (484)
T TIGR01438 74 RNYGWN-------VEETV----KHDWNRLSEAVQNHIGSLNWGYRVALREKKVNYENAYAEFVDKHRIKATNKKGKEKIY 142 (484)
T ss_pred hhcCcc-------cCCCc----ccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEeccCCCceEE
Confidence 000000 00000 00011111000 011122223333344 6999999999999976444443344 379
Q ss_pred eeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 623 SYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 623 ~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
.||+||||||++|+.|++||.++.. .+..........+++++|| |+|+|..|+++..+
T Consensus 143 ~~d~lVIATGs~p~~p~ipG~~~~~---------~~~~~~~~~~~~~~~vvIIGgG~iG~E~A~~l~~~G~~ 205 (484)
T TIGR01438 143 SAERFLIATGERPRYPGIPGAKELC---------ITSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLD 205 (484)
T ss_pred EeCEEEEecCCCCCCCCCCCcccee---------ecHHHhhcccccCCCEEEECCCHHHHHHHHHHHHhCCc
Confidence 9999999999999999999975321 1111122223457889999 99999999887654
No 113
>COG1251 NirB NAD(P)H-nitrite reductase [Energy production and conversion]
Probab=99.49 E-value=5e-14 Score=152.40 Aligned_cols=169 Identities=19% Similarity=0.251 Sum_probs=121.3
Q ss_pred cccccccCcchhHHHHHHHHHhhcCC-CcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGK-GQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~-~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
..++||||.|++|..+..++....|+ .+|+++...++..|....
T Consensus 3 k~klvvvGnGmag~r~iEell~~~~~~~~iTvfg~Ep~~nY~Ri~----------------------------------- 47 (793)
T COG1251 3 KQKLVIIGNGMAGHRTIEELLESAPDLYDITVFGEEPRPNYNRIL----------------------------------- 47 (793)
T ss_pred ceeEEEEecccchhhHHHHHHhcCcccceEEEeccCCCcccccee-----------------------------------
Confidence 45899999999999999999986555 799999988877665421
Q ss_pred CCCceEEEeeecceecCCCcccccCccccccccccccccccc-chhhhccCCcEEE-eceEEEEEcCCCeEEcCCCcEEe
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRR-PMKSVLPSGATWV-KDKIVSFDPENNRVRTQAGSEIS 623 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gv~~~-~~~v~~id~~~~~V~~~~g~~i~ 623 (706)
...+..+..+.+++.. ....+.++||+++ ..+|++||++++.|++++|.++.
T Consensus 48 --------------------------Ls~vl~~~~~~edi~l~~~dwy~~~~i~L~~~~~v~~idr~~k~V~t~~g~~~~ 101 (793)
T COG1251 48 --------------------------LSSVLAGEKTAEDISLNRNDWYEENGITLYTGEKVIQIDRANKVVTTDAGRTVS 101 (793)
T ss_pred --------------------------eccccCCCccHHHHhccchhhHHHcCcEEEcCCeeEEeccCcceEEccCCcEee
Confidence 1111112222333333 2333444799985 56899999999999999999999
Q ss_pred eCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhhhhhhhcccc
Q psy8791 624 YEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKRKMKKEAQWI 698 (706)
Q Consensus 624 yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~~~~~~~~~~ 698 (706)
||+|||||||.|++|++||.+ ..++..++++.+.+.........++.+|| |+|.|..|.++. -+.+|+
T Consensus 102 YDkLilATGS~pfi~PiPG~~--~~~v~~~R~i~D~~am~~~ar~~~~avVIGGGLLGlEaA~~L~~~G-----m~~~Vv 174 (793)
T COG1251 102 YDKLIIATGSYPFILPIPGSD--LPGVFVYRTIDDVEAMLDCARNKKKAVVIGGGLLGLEAARGLKDLG-----MEVTVV 174 (793)
T ss_pred cceeEEecCccccccCCCCCC--CCCeeEEecHHHHHHHHHHHhccCCcEEEccchhhhHHHHHHHhCC-----CceEEE
Confidence 999999999999999999987 55666666665555555444455565666 899998887654 455666
Q ss_pred ccccc
Q psy8791 699 RFQEK 703 (706)
Q Consensus 699 ~~~~~ 703 (706)
+..+.
T Consensus 175 h~~~~ 179 (793)
T COG1251 175 HIAPT 179 (793)
T ss_pred eecch
Confidence 65443
No 114
>PRK14727 putative mercuric reductase; Provisional
Probab=99.49 E-value=2.4e-14 Score=158.59 Aligned_cols=187 Identities=18% Similarity=0.190 Sum_probs=112.0
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
++|++|||+|+||+.+|..+++. +.++++||+++.. ||+|. +..|.|.|.|+.....+......
T Consensus 16 ~~dvvvIG~G~aG~~~a~~~~~~--g~~v~~ie~~~~~----------GG~c~-n~GciPsk~l~~~a~~~~~~~~~--- 79 (479)
T PRK14727 16 QLHVAIIGSGSAAFAAAIKAAEH--GARVTIIEGADVI----------GGCCV-NVGCVPSKILIRAAQLAHQQRSN--- 79 (479)
T ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCeEEEEEccCcc----------eeEec-cccccccHHHHHHHHHHHHHhhc---
Confidence 58999999999999999999998 7899999985432 34433 34457777666544221111000
Q ss_pred CCceEEEeeecceecCCCcccccCcccccccccc-ccccccc-chhhhcc--CCcEEEeceEEEEEcCCCeEEcCCCc--
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMK-KLSDSRR-PMKSVLP--SGATWVKDKIVSFDPENNRVRTQAGS-- 620 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~--~gv~~~~~~v~~id~~~~~V~~~~g~-- 620 (706)
+...+. ...+. ..+..+..... ...++.. .+...++ .+|+++.+++.++|.+...|.+.+|+
T Consensus 80 ~~~g~~------~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~G~a~f~~~~~v~v~~~~g~~~ 147 (479)
T PRK14727 80 PFDGVE------AVAPS------IDRGLLLHQQQARVEELRHAKYQSILDGNPALTLLKGYARFKDGNTLVVRLHDGGER 147 (479)
T ss_pred cccCcc------cCCCc------cCHHHHHHHHHHHHHHHhhhhHHHHHhhcCCeEEEEEEEEEecCCEEEEEeCCCceE
Confidence 000000 00000 00000000000 0111111 1333343 38999999999998876667766764
Q ss_pred EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 621 EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 621 ~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
+++||+||||||++|..|++||.++. .+.+..........+++++|| |+|+|..++++..+
T Consensus 148 ~~~~d~lViATGs~p~~p~i~G~~~~--------~~~~~~~~l~~~~~~k~vvVIGgG~iG~E~A~~l~~~G~~ 213 (479)
T PRK14727 148 VLAADRCLIATGSTPTIPPIPGLMDT--------PYWTSTEALFSDELPASLTVIGSSVVAAEIAQAYARLGSR 213 (479)
T ss_pred EEEeCEEEEecCCCCCCCCCCCcCcc--------ceecchHHhccccCCCeEEEECCCHHHHHHHHHHHHcCCE
Confidence 69999999999999999999997531 011111111122357899999 99999999876543
No 115
>TIGR01423 trypano_reduc trypanothione-disulfide reductase. Trypanothione, a glutathione-modified derivative of spermidine, is (in its reduced form) an important antioxidant found in trypanosomatids (Crithidia, Leishmania, Trypanosoma). This model describes trypanothione reductase, a possible antitrypanosomal drug target closely related to some forms of glutathione reductase.
Probab=99.48 E-value=3.8e-14 Score=156.04 Aligned_cols=194 Identities=14% Similarity=0.164 Sum_probs=111.6
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
+.|||+|||+|+||+.||.++.++. +.+|+|||++.... .+.... .||+| ++..|.|.|.|++.+.........
T Consensus 2 ~~~DviVIG~G~~G~~aA~~aa~~~-g~~V~lie~~~~~~-~~~~~~-~GGtC-ln~GCiPsK~l~~~a~~~~~~~~~-- 75 (486)
T TIGR01423 2 KAFDLVVIGAGSGGLEAGWNAATLY-KKRVAVIDVQTHHG-PPHYAA-LGGTC-VNVGCVPKKLMVTGAQYMDTLRES-- 75 (486)
T ss_pred CccCEEEECCChHHHHHHHHHHHhc-CCEEEEEecccCcc-ccccCC-ccCee-cCcCCccHHHHHHHHHHHHHHHHh--
Confidence 4689999999999999999999841 57999999741100 000001 23433 356667888888776332211110
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc--CCcEEEeceEEEEEcCCCeEEcC---C-
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP--SGATWVKDKIVSFDPENNRVRTQ---A- 618 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~gv~~~~~~v~~id~~~~~V~~~---~- 618 (706)
..+.+. ..... ....|..+... ....+.+...+...++ .||+++++++.+++++.-.|... +
T Consensus 76 -~~~gi~--------~~~~~--~~~d~~~~~~~~~~~v~~~~~~~~~~l~~~~gv~~i~G~a~f~~~~~v~V~~~~~~~~ 144 (486)
T TIGR01423 76 -AGFGWE--------FDRSS--VKANWKALIAAKNKAVLDINKSYEGMFADTEGLTFFLGWGALEDKNVVLVRESADPKS 144 (486)
T ss_pred -hccCee--------ccCCc--cccCHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEEEEccCCEEEEeeccCCCC
Confidence 000000 00000 00001111100 0112223334444554 38999999999988653333321 1
Q ss_pred --CcEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHH
Q psy8791 619 --GSEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDL 686 (706)
Q Consensus 619 --g~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~ 686 (706)
.+++.||+||||||++|..|++||.+... +......+...+++++|| |+|+|..+.++
T Consensus 145 ~~~~~~~~d~lIIATGs~p~~p~i~G~~~~~----------~~~~~~~~~~~~~~vvIIGgG~iG~E~A~~~~~l 209 (486)
T TIGR01423 145 AVKERLQAEHILLATGSWPQMLGIPGIEHCI----------SSNEAFYLDEPPRRVLTVGGGFISVEFAGIFNAY 209 (486)
T ss_pred CcceEEECCEEEEecCCCCCCCCCCChhhee----------chhhhhccccCCCeEEEECCCHHHHHHHHHHHHh
Confidence 24799999999999999999999975311 111112223457899999 99999988776
No 116
>TIGR01421 gluta_reduc_1 glutathione-disulfide reductase, animal/bacterial. The tripeptide glutathione is an important reductant, e.g., for maintaining the cellular thiol/disulfide status and for protecting against reactive oxygen species such as hydrogen peroxide. Glutathione-disulfide reductase regenerates reduced glutathione from oxidized glutathione (glutathione disulfide) + NADPH. This model represents one of two closely related subfamilies of glutathione-disulfide reductase. Both are closely related to trypanothione reductase, and separate models are built so each of the three can describe proteins with conserved function. This model describes glutathione-disulfide reductases of animals, yeast, and a number of animal-resident bacteria.
Probab=99.48 E-value=3.6e-14 Score=155.69 Aligned_cols=183 Identities=14% Similarity=0.148 Sum_probs=106.9
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
|.|||+|||||+||++||..++++ +.+|+|||++. .||.|. +..|.|.|.|+...........
T Consensus 1 ~~yDvvVIG~GpaG~~aA~~aa~~--G~~V~liE~~~-----------~GG~c~-~~gciPsk~l~~~a~~~~~~~~--- 63 (450)
T TIGR01421 1 KHYDYLVIGGGSGGIASARRAAEH--GAKALLVEAKK-----------LGGTCV-NVGCVPKKVMWYASDLAERMHD--- 63 (450)
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--CCcEEEecccc-----------ccccee-ccCcCccHHHHHHHHHHHHHhH---
Confidence 358999999999999999999998 88999999842 244433 3444576665554321111000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCcEEe
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGSEIS 623 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~~i~ 623 (706)
...+.+. .... ....|..+... ....+.+...+...+. .||+++.+++...+ .++|.+ +++++.
T Consensus 64 ~~~~g~~---------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~g~~~~~~--~~~v~v-~~~~~~ 129 (450)
T TIGR01421 64 AADYGFY---------QNLE--NTFNWPELKEKRDAYVDRLNGIYQKNLEKNKVDVIFGHARFTK--DGTVEV-NGRDYT 129 (450)
T ss_pred HhhcCcc---------cCCc--CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEcc--CCEEEE-CCEEEE
Confidence 0000000 0000 00000000000 0001111222333333 69999999887765 346665 566899
Q ss_pred eCEEEEecCcccCcc-CCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 624 YEYMIVASGIQMYYD-RVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 624 yd~lViAtGs~~~~p-~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
||+||||||++|..| ++||.+... +......+...+++++|| |+|+|..|+++..+
T Consensus 130 ~d~vIiAtGs~p~~p~~i~g~~~~~----------~~~~~~~~~~~~~~vvIIGgG~iG~E~A~~l~~~g~~ 191 (450)
T TIGR01421 130 APHILIATGGKPSFPENIPGAELGT----------DSDGFFALEELPKRVVIVGAGYIAVELAGVLHGLGSE 191 (450)
T ss_pred eCEEEEecCCCCCCCCCCCCCceeE----------cHHHhhCccccCCeEEEECCCHHHHHHHHHHHHcCCc
Confidence 999999999999999 899865211 111112223357899999 99999999876543
No 117
>PRK05976 dihydrolipoamide dehydrogenase; Validated
Probab=99.48 E-value=3.8e-14 Score=156.96 Aligned_cols=187 Identities=18% Similarity=0.183 Sum_probs=109.5
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
.+.|||+|||||+||++||.+++++ +.+|+|||++. .||.|. +..|.|.|.++.....+......
T Consensus 2 ~~~ydvvVIG~GpaG~~aA~~aa~~--G~~v~lie~~~-----------~GG~c~-~~gciPsk~l~~~a~~~~~~~~~- 66 (472)
T PRK05976 2 AKEYDLVIIGGGPGGYVAAIRAGQL--GLKTALVEKGK-----------LGGTCL-HKGCIPSKALLHSAEVFQTAKKA- 66 (472)
T ss_pred CccccEEEECCCHHHHHHHHHHHhC--CCeEEEEEccC-----------CCcceE-cCCcCchHHHHHHHHHHHHHHHH-
Confidence 3578999999999999999999998 88999999742 134443 34456777776654332211100
Q ss_pred cCCCceEEEeeecceecCCCcccccCcccccccccc-cccccccchhhhcc-CCcEEEeceEEEEEcC-------CCeEE
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMK-KLSDSRRPMKSVLP-SGATWVKDKIVSFDPE-------NNRVR 615 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~-------~~~V~ 615 (706)
..+++ .... ....|..+..... ..+.+...+..+++ .||+++.++++++|++ ..+|.
T Consensus 67 --~~~g~---------~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~a~~i~~~~~~~~~~~~~v~ 132 (472)
T PRK05976 67 --SPFGI---------SVSG---PALDFAKVQERKDGIVDRLTKGVAALLKKGKIDVFHGIGRILGPSIFSPMPGTVSVE 132 (472)
T ss_pred --HhcCc---------cCCC---CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeCCCCCcCCceEEEEE
Confidence 00000 0000 0000000000000 01111122233333 5899999999999988 55677
Q ss_pred cCCC--cEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 616 TQAG--SEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 616 ~~~g--~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+.+| +++.||+||||||++|..+ ||.+ .... ...+..........+++++|| |+|+|..|+++..
T Consensus 133 ~~~g~~~~~~~d~lViATGs~p~~~--p~~~--~~~~----~~~~~~~~~~~~~~~~~vvIIGgG~~G~E~A~~l~~~g~ 204 (472)
T PRK05976 133 TETGENEMIIPENLLIATGSRPVEL--PGLP--FDGE----YVISSDEALSLETLPKSLVIVGGGVIGLEWASMLADFGV 204 (472)
T ss_pred eCCCceEEEEcCEEEEeCCCCCCCC--CCCC--CCCc----eEEcchHhhCccccCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 6676 5799999999999999744 4432 1110 011222222233457899999 8999999987653
No 118
>PRK06912 acoL dihydrolipoamide dehydrogenase; Validated
Probab=99.48 E-value=3.7e-14 Score=156.39 Aligned_cols=185 Identities=17% Similarity=0.159 Sum_probs=110.5
Q ss_pred cccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccCCC
Q psy8791 469 HLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDSS 548 (706)
Q Consensus 469 ~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 548 (706)
+|+|||+|+||+++|.++++. +.+|+|||+++. ||.|. +..|.|.|.+++....+...... ..
T Consensus 2 ~vvVIG~G~aG~~aA~~~~~~--g~~V~lie~~~~-----------GG~c~-n~gciPsk~l~~~a~~~~~~~~~---~~ 64 (458)
T PRK06912 2 KLVVIGGGPAGYVAAITAAQN--GKNVTLIDEADL-----------GGTCL-NEGCMPTKSLLESAEVHDKVKKA---NH 64 (458)
T ss_pred eEEEECCCHHHHHHHHHHHhC--CCcEEEEECCcc-----------cccCC-CCccccchHHHHHHHHHHHHHHH---Hh
Confidence 799999999999999999997 889999998541 33332 44567777776654322211100 00
Q ss_pred ceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCC-cEEeeC
Q psy8791 549 YTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAG-SEISYE 625 (706)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g-~~i~yd 625 (706)
+.+. ..... ....|..+... ....+++.......++ .+++++++++.++|++...|..+++ ++++||
T Consensus 65 ~g~~--------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~~~~~~~~d 134 (458)
T PRK06912 65 FGIT--------LPNGS--ISIDWKQMQARKSQIVTQLVQGIQYLMKKNKIKVIQGKASFETDHRVRVEYGDKEEVVDAE 134 (458)
T ss_pred cCcc--------ccCCC--CccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEccCCEEEEeeCCCcEEEECC
Confidence 0000 00000 00000101000 0011112223333343 5899999999999877666665555 479999
Q ss_pred EEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 626 YMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 626 ~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+||||||++|..|+++|.+.. ...+..........+++++|| |+|+|..+.++..
T Consensus 135 ~lviATGs~p~~~p~~~~~~~--------~v~~~~~~~~~~~~~~~vvIIGgG~iG~E~A~~l~~~g~ 194 (458)
T PRK06912 135 QFIIAAGSEPTELPFAPFDGK--------WIINSKHAMSLPSIPSSLLIVGGGVIGCEFASIYSRLGT 194 (458)
T ss_pred EEEEeCCCCCCCCCCCCCCCC--------eEEcchHHhCccccCCcEEEECCCHHHHHHHHHHHHcCC
Confidence 999999999988888775411 111222222333457899999 9999998877653
No 119
>KOG1335|consensus
Probab=99.48 E-value=3.2e-14 Score=141.72 Aligned_cols=189 Identities=18% Similarity=0.253 Sum_probs=134.6
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccc---cc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKD---KI 542 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~---~~ 542 (706)
.-+|++|||+|++|..||.+..+. +.+.++||++... ||+ +++..|+|+|.||...-.|... +.
T Consensus 38 ~d~DvvvIG~GpGGyvAAikAaQl--GlkTacvEkr~~L----------GGT-cLnvGcIPSKALL~nSh~yh~~q~~~~ 104 (506)
T KOG1335|consen 38 NDYDVVVIGGGPGGYVAAIKAAQL--GLKTACVEKRGTL----------GGT-CLNVGCIPSKALLNNSHLYHEAQHEDF 104 (506)
T ss_pred ccCCEEEECCCCchHHHHHHHHHh--cceeEEEeccCcc----------Cce-eeeccccccHHHhhhhHHHHHHhhhHH
Confidence 368999999999999999999999 8999999997653 333 3466778999999987555332 33
Q ss_pred cccCCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCC--
Q psy8791 543 VSFDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAG-- 619 (706)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g-- 619 (706)
.+++.++.-.++.+...++.. ....+++...+..+++ ++|+++.+....+||..-++.-.||
T Consensus 105 ~~rGi~vs~~~~dl~~~~~~k---------------~~~vk~Lt~gi~~lfkknkV~~~kG~gsf~~p~~V~v~k~dg~~ 169 (506)
T KOG1335|consen 105 ASRGIDVSSVSLDLQAMMKAK---------------DNAVKQLTGGIENLFKKNKVTYVKGFGSFLDPNKVSVKKIDGED 169 (506)
T ss_pred HhcCccccceecCHHHHHHHH---------------HHHHHHHhhHHHHHhhhcCeEEEeeeEeecCCceEEEeccCCCc
Confidence 344333322111111111111 1123445556666776 7899999999999998777776777
Q ss_pred cEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhhh
Q psy8791 620 SEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKRK 690 (706)
Q Consensus 620 ~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~~ 690 (706)
..+.++++||||||.- +++||+. .++ +.+.++.....+..-|++++|| |+|++..+.++..++
T Consensus 170 ~ii~aKnIiiATGSeV--~~~PGI~--IDe----kkIVSStgALsL~~vPk~~~viG~G~IGLE~gsV~~rLGseV 237 (506)
T KOG1335|consen 170 QIIKAKNIIIATGSEV--TPFPGIT--IDE----KKIVSSTGALSLKEVPKKLTVIGAGYIGLEMGSVWSRLGSEV 237 (506)
T ss_pred eEEeeeeEEEEeCCcc--CCCCCeE--ecC----ceEEecCCccchhhCcceEEEEcCceeeeehhhHHHhcCCeE
Confidence 4689999999999963 3778876 444 3455666666777889999999 999999998887653
No 120
>PRK06115 dihydrolipoamide dehydrogenase; Reviewed
Probab=99.47 E-value=3e-14 Score=157.15 Aligned_cols=189 Identities=15% Similarity=0.207 Sum_probs=108.9
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
++|||+|||+|+||++||.++.++ +.+|+|||+++. .||.| ++..|.|.|.|+.....+....-..
T Consensus 2 ~~~DvvVIG~GpaG~~AA~~aa~~--G~~V~liE~~~~----------~GG~c-~~~gciPsK~l~~~~~~~~~~~~~~- 67 (466)
T PRK06115 2 ASYDVVIIGGGPGGYNAAIRAGQL--GLKVACVEGRST----------LGGTC-LNVGCMPSKALLHASELYEAASGGE- 67 (466)
T ss_pred CcccEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCc----------eeeee-ccCcccccHHHHHHhHHHHHHhhhh-
Confidence 468999999999999999999998 899999996432 13443 3455667777777654332110000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCc--E
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGS--E 621 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~--~ 621 (706)
...+.+. ... ...+...... ......+.......++ .+|+++.+++...++.+..|.+.+|+ +
T Consensus 68 ~~~~gi~-------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~~~~ 134 (466)
T PRK06115 68 FAHLGIE-------VKP------TLNLAQMMKQKDESVEALTKGVEFLFRKNKVDWIKGWGRLDGVGKVVVKAEDGSETQ 134 (466)
T ss_pred hhhcCcc-------ccC------ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCEEEEEcCCCceEE
Confidence 0000000 000 0000000000 0001111122333333 58999999986666544445556664 6
Q ss_pred EeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 622 ISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 622 i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
++||+||||||++|. ++||.+ .+.. ...++.........+++++|| |+|+|..++++..+
T Consensus 135 ~~~d~lVIATGs~p~--~ipg~~--~~~~----~~~~~~~~~~~~~~~~~vvIIGgG~ig~E~A~~l~~~G~~ 199 (466)
T PRK06115 135 LEAKDIVIATGSEPT--PLPGVT--IDNQ----RIIDSTGALSLPEVPKHLVVIGAGVIGLELGSVWRRLGAQ 199 (466)
T ss_pred EEeCEEEEeCCCCCC--CCCCCC--CCCC----eEECHHHHhCCccCCCeEEEECCCHHHHHHHHHHHHcCCe
Confidence 999999999999985 577764 2221 112222222233468999999 99999988876543
No 121
>PRK07846 mycothione reductase; Reviewed
Probab=99.46 E-value=8.5e-14 Score=152.68 Aligned_cols=179 Identities=14% Similarity=0.137 Sum_probs=110.1
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccc-cccC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKI-VSFD 546 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~ 546 (706)
||+||||+|+||..+|.+. . +.+|+|||++. .||.| ++..|.|.|.|+..+........ ..++
T Consensus 2 yD~vVIG~G~~g~~aa~~~--~--G~~V~lie~~~-----------~GGtC-~n~GCiPsK~l~~~a~~~~~~~~~~~~g 65 (451)
T PRK07846 2 YDLIIIGTGSGNSILDERF--A--DKRIAIVEKGT-----------FGGTC-LNVGCIPTKMFVYAADVARTIREAARLG 65 (451)
T ss_pred CCEEEECCCHHHHHHHHHH--C--CCeEEEEeCCC-----------CCCcc-cCcCcchhHHHHHHHHHHHHHHHHHhCC
Confidence 7999999999999988653 3 78999999743 13333 45666788887776644322111 0010
Q ss_pred CCceEEEeeecceecCCCcccccCcccccccccc-cccccccc-hhhh-cc-CCcEEEeceEEEEEcCCCeEEcCCCcEE
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMK-KLSDSRRP-MKSV-LP-SGATWVKDKIVSFDPENNRVRTQAGSEI 622 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~-~~-~gv~~~~~~v~~id~~~~~V~~~~g~~i 622 (706)
+. .... ...|..+..... ..+++... .... ++ .||+++.+++.+++ +++|.+.+|+++
T Consensus 66 ----~~--------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~--~~~V~v~~g~~~ 127 (451)
T PRK07846 66 ----VD--------AELD----GVRWPDIVSRVFGRIDPIAAGGEEYRGRDTPNIDVYRGHARFIG--PKTLRTGDGEEI 127 (451)
T ss_pred ----cc--------CCCC----cCCHHHHHHHHHHHHHHHhccchhhhhhhhCCcEEEEEEEEEec--CCEEEECCCCEE
Confidence 00 0000 001111111000 11111111 2222 33 69999999999985 568888888899
Q ss_pred eeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 623 SYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 623 ~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
.||+||||||++|..|++||.+.. .+.+......+...+++++|| |+|+|..|+++..
T Consensus 128 ~~d~lViATGs~p~~p~i~g~~~~--------~~~~~~~~~~l~~~~~~vvIIGgG~iG~E~A~~l~~~G~ 190 (451)
T PRK07846 128 TADQVVIAAGSRPVIPPVIADSGV--------RYHTSDTIMRLPELPESLVIVGGGFIAAEFAHVFSALGV 190 (451)
T ss_pred EeCEEEEcCCCCCCCCCCCCcCCc--------cEEchHHHhhhhhcCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 999999999999999999996421 122222233334467899999 9999999887653
No 122
>TIGR01292 TRX_reduct thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (PFAM:PF00070).
Probab=99.44 E-value=5.5e-13 Score=139.06 Aligned_cols=156 Identities=20% Similarity=0.181 Sum_probs=98.3
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDS 547 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 547 (706)
+||+|||||+||+++|..|++. +.+|+|||+++. ||.......
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~-----------gg~~~~~~~------------------------ 43 (300)
T TIGR01292 1 YDVIIIGAGPAGLTAAIYAARA--NLKTLIIEGMEP-----------GGQLTTTTE------------------------ 43 (300)
T ss_pred CcEEEECCCHHHHHHHHHHHHC--CCCEEEEeccCC-----------Ccceeeccc------------------------
Confidence 5899999999999999999987 789999998652 111100000
Q ss_pred CceEEEeeecceecCCCcccccCcccccccccccccccccchhhhc-cCCcEEEeceEEEEEcCCC--eEEcCCCcEEee
Q psy8791 548 SYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PSGATWVKDKIVSFDPENN--RVRTQAGSEISY 624 (706)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~~~~~~v~~id~~~~--~V~~~~g~~i~y 624 (706)
.+..|.++... ...++...+.+.+ +.+++++.++|+.++++++ +|.+.+++++.|
T Consensus 44 ------------------~~~~~~~~~~~----~~~~~~~~l~~~~~~~gv~~~~~~v~~v~~~~~~~~v~~~~~~~~~~ 101 (300)
T TIGR01292 44 ------------------VENYPGFPEGI----SGPELMEKMKEQAVKFGAEIIYEEVIKVDLSDRPFKVKTGDGKEYTA 101 (300)
T ss_pred ------------------ccccCCCCCCC----ChHHHHHHHHHHHHHcCCeEEEEEEEEEEecCCeeEEEeCCCCEEEe
Confidence 00000000000 0012222333333 2588887799999998765 566677789999
Q ss_pred CEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHH
Q psy8791 625 EYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLT 687 (706)
Q Consensus 625 d~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~ 687 (706)
|+||+|||++|..|++||.+...... .............+++|+|| |+|+|..+++..
T Consensus 102 d~liiAtG~~~~~~~i~g~~~~~~~~-----~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~~ 164 (300)
T TIGR01292 102 KAVIIATGASARKLGIPGEDEFLGRG-----VSYCATCDGPFFKNKEVAVVGGGDSAIEEALYLTRIA 164 (300)
T ss_pred CEEEECCCCCcccCCCCChhhcCCcc-----EEEeeecChhhcCCCEEEEECCChHHHHHHHHHHhhc
Confidence 99999999999999999976432211 11110111122356789999 889988887654
No 123
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed
Probab=99.44 E-value=1.3e-13 Score=152.47 Aligned_cols=186 Identities=16% Similarity=0.172 Sum_probs=108.4
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
..||++|||||+||++||..++++ +.+|+|||++. .||.|. +..|.|.|.++.....+......
T Consensus 3 ~~yDvvVIGaGpaG~~aA~~aa~~--G~~V~liE~~~-----------~GG~c~-~~gciP~k~l~~~~~~~~~~~~~-- 66 (462)
T PRK06416 3 FEYDVIVIGAGPGGYVAAIRAAQL--GLKVAIVEKEK-----------LGGTCL-NRGCIPSKALLHAAERADEARHS-- 66 (462)
T ss_pred ccccEEEECCCHHHHHHHHHHHHC--CCcEEEEeccc-----------ccccee-ecccCCcHHHHHhhhHHHHHHHH--
Confidence 358999999999999999999998 88999999854 144433 34456777666655322211000
Q ss_pred CCCceEEEeeecceecCCCcccccCccccccccc-ccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCC-CcEE
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGM-KKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQA-GSEI 622 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~-g~~i 622 (706)
+.+++ +.. .....+..+.... ...+.+...+...++ .||+++.++++.+|+++.+|...+ ++++
T Consensus 67 -~~~g~---------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~~~~~~ 133 (462)
T PRK06416 67 -EDFGI---------KAE---NVGIDFKKVQEWKNGVVNRLTGGVEGLLKKNKVDIIRGEAKLVDPNTVRVMTEDGEQTY 133 (462)
T ss_pred -HhcCc---------ccC---CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCEEEEecCCCcEEE
Confidence 00000 000 0000000000000 001112223333333 699999999999998766665433 4689
Q ss_pred eeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 623 SYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 623 ~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+||+||||||++|.. +||.+. ... ...+..........+++++|| |+|+|..|+++..
T Consensus 134 ~~d~lViAtGs~p~~--~pg~~~--~~~----~v~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~g~ 196 (462)
T PRK06416 134 TAKNIILATGSRPRE--LPGIEI--DGR----VIWTSDEALNLDEVPKSLVVIGGGYIGVEFASAYASLGA 196 (462)
T ss_pred EeCEEEEeCCCCCCC--CCCCCC--CCC----eEEcchHhhCccccCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 999999999999974 366541 110 111211222223457899999 8999998877643
No 124
>KOG1336|consensus
Probab=99.44 E-value=3.7e-13 Score=139.42 Aligned_cols=155 Identities=17% Similarity=0.146 Sum_probs=111.7
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
-..++|||+|++|..|+..+++..+..+++++..+.+++|.+.- + | +.
T Consensus 74 ar~fvivGgG~~g~vaie~~r~~g~~~ri~l~~~~~~~pydr~~--L------------s-~~----------------- 121 (478)
T KOG1336|consen 74 ARHFVIVGGGPGGAVAIETLRQVGFTERIALVKREYLLPYDRAR--L------------S-KF----------------- 121 (478)
T ss_pred cceEEEEcCCchhhhhHhhHHhhCCCcceEEEeccccCcccchh--c------------c-cc-----------------
Confidence 34799999999999999999999888999999877776654410 0 0 00
Q ss_pred CCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEE-EeceEEEEEcCCCeEEcCCCcEEee
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATW-VKDKIVSFDPENNRVRTQAGSEISY 624 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~-~~~~v~~id~~~~~V~~~~g~~i~y 624 (706)
|.. ..+++.....++++ .+|++ +.+.|+.+|..+++|.+.+|+++.|
T Consensus 122 ----------~~~---------------------~~~~~a~r~~e~Yke~gIe~~~~t~v~~~D~~~K~l~~~~Ge~~ky 170 (478)
T KOG1336|consen 122 ----------LLT---------------------VGEGLAKRTPEFYKEKGIELILGTSVVKADLASKTLVLGNGETLKY 170 (478)
T ss_pred ----------eee---------------------ccccccccChhhHhhcCceEEEcceeEEeeccccEEEeCCCceeec
Confidence 000 01112222223333 68998 5678999999999999999999999
Q ss_pred CEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHH
Q psy8791 625 EYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDL 686 (706)
Q Consensus 625 d~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~ 686 (706)
++|+||||+++++|++||.+ .+++..++...++............|+++ |+|+|++|..-
T Consensus 171 s~LilATGs~~~~l~~pG~~--~~nv~~ireieda~~l~~~~~~~~~vV~vG~G~ig~Evaa~l~~~ 235 (478)
T KOG1336|consen 171 SKLIIATGSSAKTLDIPGVE--LKNVFYLREIEDANRLVAAIQLGGKVVCVGGGFIGMEVAAALVSK 235 (478)
T ss_pred ceEEEeecCccccCCCCCcc--ccceeeeccHHHHHHHHHHhccCceEEEECchHHHHHHHHHHHhc
Confidence 99999999999999999988 66666666655544333333445567777 77777777654
No 125
>KOG4716|consensus
Probab=99.43 E-value=8.5e-14 Score=136.30 Aligned_cols=197 Identities=14% Similarity=0.159 Sum_probs=120.4
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
.||++|||||.+|++||+++... +.+|.++|--.. +|..+.++-|-...|..|+| |+||+.+....+.-..+..
T Consensus 19 dyDLIviGgGSgGLacaKeAa~~--G~kV~~lDfV~P---tP~GtsWGlGGTCvNVGCIP-KKLMHQAallG~al~da~k 92 (503)
T KOG4716|consen 19 DYDLIVIGGGSGGLACAKEAADL--GAKVACLDFVKP---TPQGTSWGLGGTCVNVGCIP-KKLMHQAALLGEALHDARK 92 (503)
T ss_pred CccEEEEcCCcchhhHHHHHHhc--CCcEEEEeeccc---CCCCCccccCceeeeccccc-HHHHHHHHHHHHHHHHHHh
Confidence 68999999999999999999998 889999983111 12222221122222333445 7888887666665555555
Q ss_pred CCceEEEeeecceecCCCcccccCcccccccccccccccccchh-hhccCCcEEEeceEEEEEcCCCeEEcCCC--cEEe
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMK-SVLPSGATWVKDKIVSFDPENNRVRTQAG--SEIS 623 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~gv~~~~~~v~~id~~~~~V~~~~g--~~i~ 623 (706)
++|++. +....+.|.-+...+.....+ +.-.++ ++.+..|.++++-.+++|+++...+..+| +.++
T Consensus 93 yGW~~~--------e~~ikhdW~~l~~sVqnhI~s---~NW~yRv~LreKkV~Y~NsygeFv~~h~I~at~~~gk~~~~t 161 (503)
T KOG4716|consen 93 YGWNVD--------EQKIKHDWNKLVKSVQNHIKS---LNWGYRVQLREKKVEYINSYGEFVDPHKIKATNKKGKERFLT 161 (503)
T ss_pred hCCCCc--------cccccccHHHHHHHHHHHhhh---ccceEEEEeccceeeeeecceeecccceEEEecCCCceEEee
Confidence 555543 222222222111111110000 000000 11124677888888999988666666666 3589
Q ss_pred eCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 624 YEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 624 yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
+++.|||||.+|+.|.|||..+. -.++...+.+...|.+-.|| ++|.|+.|+.+..+
T Consensus 162 a~~fvIatG~RPrYp~IpG~~Ey---------~ITSDDlFsl~~~PGkTLvVGa~YVaLECAgFL~gfg~~ 223 (503)
T KOG4716|consen 162 AENFVIATGLRPRYPDIPGAKEY---------GITSDDLFSLPYEPGKTLVVGAGYVALECAGFLKGFGYD 223 (503)
T ss_pred cceEEEEecCCCCCCCCCCceee---------eecccccccccCCCCceEEEccceeeeehhhhHhhcCCC
Confidence 99999999999999999996542 12333445555566665565 99999999888744
No 126
>PRK07845 flavoprotein disulfide reductase; Reviewed
Probab=99.39 E-value=3e-13 Score=149.23 Aligned_cols=188 Identities=13% Similarity=0.171 Sum_probs=106.5
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
|++|+|||+|++|+.+|..+.++ +.+|+|||++.. ||.|. +..|.|.|.++............
T Consensus 1 ~~~vvviG~G~~G~~~a~~~~~~--g~~v~~~e~~~~-----------gG~c~-~~gciPsK~l~~~a~~~~~~~~~--- 63 (466)
T PRK07845 1 MTRIVIIGGGPGGYEAALVAAQL--GADVTVIERDGL-----------GGAAV-LTDCVPSKTLIATAEVRTELRRA--- 63 (466)
T ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCeEEEEEccCC-----------CCccc-ccCCcchHHHHHHHHHHHHHHHH---
Confidence 67899999999999999999998 889999997531 44444 44557877776654221111000
Q ss_pred CCceEEEeeecceecCCCcccccCccccccccccc-ccccccchhhhcc-CCcEEEeceEEEE----EcCCCeEEcCCCc
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKK-LSDSRRPMKSVLP-SGATWVKDKIVSF----DPENNRVRTQAGS 620 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~gv~~~~~~v~~i----d~~~~~V~~~~g~ 620 (706)
..+.+. ...... ....+..+...... .+.+...+.+.+. .||+++.++++.+ +++..+|.+.+|+
T Consensus 64 ~~~g~~-------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gV~~~~g~~~~~~~~~~~~~v~V~~~~g~ 134 (466)
T PRK07845 64 AELGIR-------FIDDGE--ARVDLPAVNARVKALAAAQSADIRARLEREGVRVIAGRGRLIDPGLGPHRVKVTTADGG 134 (466)
T ss_pred HhCCcc-------cccCcc--cccCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEeecccCCCEEEEEeCCCc
Confidence 000000 000000 00001111100000 0111122223232 6999999999994 4444445556675
Q ss_pred --EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 621 --EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 621 --~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
++.||+||||||++|..|++++.+ ...+ .+..........+++++|| |+|+|..|+++..
T Consensus 135 ~~~~~~d~lViATGs~p~~~p~~~~~--~~~v------~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~ 201 (466)
T PRK07845 135 EETLDADVVLIATGASPRILPTAEPD--GERI------LTWRQLYDLDELPEHLIVVGSGVTGAEFASAYTELGV 201 (466)
T ss_pred eEEEecCEEEEcCCCCCCCCCCCCCC--CceE------EeehhhhcccccCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 799999999999999876655432 1111 1111122223356889999 8899988877654
No 127
>PRK07818 dihydrolipoamide dehydrogenase; Reviewed
Probab=99.39 E-value=5e-13 Score=147.79 Aligned_cols=187 Identities=12% Similarity=0.085 Sum_probs=104.4
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
|.+|||+|||||+||++||.++++. +.+|+|||++. + ||.|. +..|.|.|.++.............
T Consensus 2 ~~~~DvvIIG~GpaG~~AA~~aa~~--G~~V~lie~~~----------~-GG~c~-~~gciPsk~l~~~~~~~~~~~~~~ 67 (466)
T PRK07818 2 MTHYDVVVLGAGPGGYVAAIRAAQL--GLKTAVVEKKY----------W-GGVCL-NVGCIPSKALLRNAELAHIFTKEA 67 (466)
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC--CCeEEEEecCC----------C-CCcee-cCCccccHHHHhhHHHHHHHHHHH
Confidence 3468999999999999999999998 89999999742 1 33332 334557766655432111100000
Q ss_pred cCCCceEEEeeecceecCCCcccccCcccccccccc-cccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCC--c
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMK-KLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAG--S 620 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g--~ 620 (706)
..+++ +.. ....+........ ..+.........++ .+|+.+.+++.+++.....|...+| +
T Consensus 68 --~~~gi---------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~g~~~~~~~~~v~v~~~~g~~~ 132 (466)
T PRK07818 68 --KTFGI---------SGE----VTFDYGAAFDRSRKVAEGRVKGVHFLMKKNKITEIHGYGTFTDANTLEVDLNDGGTE 132 (466)
T ss_pred --HhcCC---------CcC----cccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEcCCCEEEEEecCCCee
Confidence 00000 000 0000000000000 00011112222232 4899999998888876545555555 3
Q ss_pred EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 621 EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 621 ~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
+++||+||||||++|..| ||.+. .. ...+..........+++++|| |+|+|..++++..+
T Consensus 133 ~~~~d~lViATGs~p~~~--pg~~~--~~-----~v~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~G~~ 197 (466)
T PRK07818 133 TVTFDNAIIATGSSTRLL--PGTSL--SE-----NVVTYEEQILSRELPKSIVIAGAGAIGMEFAYVLKNYGVD 197 (466)
T ss_pred EEEcCEEEEeCCCCCCCC--CCCCC--CC-----cEEchHHHhccccCCCeEEEECCcHHHHHHHHHHHHcCCe
Confidence 799999999999999753 66531 11 011111111122357899999 99999998877644
No 128
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]
Probab=99.39 E-value=1.7e-12 Score=141.16 Aligned_cols=189 Identities=14% Similarity=0.145 Sum_probs=112.2
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCc-EEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQ-VSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIV 543 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~-i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~ 543 (706)
+.+++++|||||++|+++|++|++. +.. ++|+|+++...- .|....+.
T Consensus 6 ~~~~~v~IIGaG~sGlaaa~~L~~~--g~~~~~i~Ek~~~~Gg-----------------------------~W~~~ry~ 54 (443)
T COG2072 6 ATHTDVAIIGAGQSGLAAAYALKQA--GVPDFVIFEKRDDVGG-----------------------------TWRYNRYP 54 (443)
T ss_pred CCcccEEEECCCHHHHHHHHHHHHc--CCCcEEEEEccCCcCC-----------------------------cchhccCC
Confidence 3567999999999999999999998 444 999999875431 11111110
Q ss_pred ccCCCceEEEeeecceecCCCcccccCccccc----ccccccccccccchhhhcc--CCcEEEeceEEEEEcCC--C--e
Q psy8791 544 SFDSSYTFTILILHSIVEPTDDHYYQPMFTLI----GGGMKKLSDSRRPMKSVLP--SGATWVKDKIVSFDPEN--N--R 613 (706)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~--~gv~~~~~~v~~id~~~--~--~ 613 (706)
+. .+| .+...+ .-+..++. ........++...+.+... ..+. ++..|..++++. + +
T Consensus 55 ~l---------~~~---~p~~~~-~~~~~p~~~~~~~~~~~~~~~y~~~~~~~y~~~~~i~-~~~~v~~~~~~~~~~~w~ 120 (443)
T COG2072 55 GL---------RLD---SPKWLL-GFPFLPFRWDEAFAPFAEIKDYIKDYLEKYGLRFQIR-FNTRVEVADWDEDTKRWT 120 (443)
T ss_pred ce---------EEC---Cchhee-ccCCCccCCcccCCCcccHHHHHHHHHHHcCceeEEE-cccceEEEEecCCCCeEE
Confidence 00 000 000000 00011110 0011112222223222222 1232 333333344433 2 5
Q ss_pred EEcCCCcE--EeeCEEEEecCc--ccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHH
Q psy8791 614 VRTQAGSE--ISYEYMIVASGI--QMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAY 684 (706)
Q Consensus 614 V~~~~g~~--i~yd~lViAtGs--~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~ 684 (706)
|+++++.+ +.+|+||+|||. .|++|.++|.+++... .++++.+....+..+|+|+|| |+++|.+|.
T Consensus 121 V~~~~~~~~~~~a~~vV~ATG~~~~P~iP~~~G~~~f~g~-----~~HS~~~~~~~~~~GKrV~VIG~GaSA~di~~~l~ 195 (443)
T COG2072 121 VTTSDGGTGELTADFVVVATGHLSEPYIPDFAGLDEFKGR-----ILHSADWPNPEDLRGKRVLVIGAGASAVDIAPELA 195 (443)
T ss_pred EEEcCCCeeeEecCEEEEeecCCCCCCCCCCCCccCCCce-----EEchhcCCCccccCCCeEEEECCCccHHHHHHHHH
Confidence 77777755 559999999995 8999999999876553 455555666667789999999 899999998
Q ss_pred HHHhh--hhhhhccccccccc
Q psy8791 685 DLTKR--KMKKEAQWIRFQEK 703 (706)
Q Consensus 685 ~~~~~--~~~~~~~~~~~~~~ 703 (706)
+.+++ .++|..+|+.+...
T Consensus 196 ~~ga~vt~~qRs~~~~~~~~~ 216 (443)
T COG2072 196 EVGASVTLSQRSPPHILPKPL 216 (443)
T ss_pred hcCCeeEEEecCCCceecccc
Confidence 88644 56777777765443
No 129
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=99.39 E-value=9.9e-13 Score=147.91 Aligned_cols=157 Identities=16% Similarity=0.165 Sum_probs=99.2
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
.+|||+|||||+||++||..++++ +.+|+|||++.. ||.+......
T Consensus 3 ~~yDVvIIGgGpAGL~AA~~lar~--g~~V~liE~~~~-----------GG~~~~~~~i--------------------- 48 (555)
T TIGR03143 3 EIYDLIIIGGGPAGLSAGIYAGRA--KLDTLIIEKDDF-----------GGQITITSEV--------------------- 48 (555)
T ss_pred CcCcEEEECCCHHHHHHHHHHHHC--CCCEEEEecCCC-----------CceEEecccc---------------------
Confidence 468999999999999999999987 899999998542 2221100000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEEeceEEEEEcCCC--eEEcCCCcEE
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENN--RVRTQAGSEI 622 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~--~V~~~~g~~i 622 (706)
. ..+.. ......++...+.+... .|++++.++|+.++++.+ .|.+.++ ++
T Consensus 49 ---------------~------~~pg~-----~~~~~~~l~~~l~~~~~~~gv~~~~~~V~~i~~~~~~~~V~~~~g-~~ 101 (555)
T TIGR03143 49 ---------------V------NYPGI-----LNTTGPELMQEMRQQAQDFGVKFLQAEVLDVDFDGDIKTIKTARG-DY 101 (555)
T ss_pred ---------------c------cCCCC-----cCCCHHHHHHHHHHHHHHcCCEEeccEEEEEEecCCEEEEEecCC-EE
Confidence 0 00000 00011122222322222 589999999999998664 4555555 78
Q ss_pred eeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 623 SYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 623 ~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
.||+||||||++|+.|++||.+..... ..............+++|+|| |+|+|..|+++..
T Consensus 102 ~a~~lVlATGa~p~~~~ipG~~~~~~~-----~v~~~~~~~~~~~~g~~VvVIGgG~~g~E~A~~L~~~g~ 167 (555)
T TIGR03143 102 KTLAVLIATGASPRKLGFPGEEEFTGR-----GVAYCATCDGEFFTGMDVFVIGGGFAAAEEAVFLTRYAS 167 (555)
T ss_pred EEeEEEECCCCccCCCCCCCHHHhCCc-----eEEEEeecChhhcCCCEEEEECCCHHHHHHHHHHHccCC
Confidence 999999999999999999997542211 111111111122357899999 8899888876553
No 130
>PTZ00153 lipoamide dehydrogenase; Provisional
Probab=99.39 E-value=2.6e-13 Score=152.90 Aligned_cols=201 Identities=17% Similarity=0.140 Sum_probs=111.8
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
.|||+|||+|+||+.+|..+.++ +.+|+|||++... .||+| ++..|.|.|.|+..+..+.........
T Consensus 116 ~yDviVIG~G~gG~~aA~~aa~~--G~kV~lie~~~~~---------lGGtC-vn~GCiPsK~l~~~a~~~~~~~~~~~~ 183 (659)
T PTZ00153 116 EYDVGIIGCGVGGHAAAINAMER--GLKVIIFTGDDDS---------IGGTC-VNVGCIPSKALLYATGKYRELKNLAKL 183 (659)
T ss_pred cCCEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCCCc---------cccce-eEeCCcchHHHHHHHHHHHHHHhcccc
Confidence 68999999999999999999998 8999999963221 13333 355567888887776544332211100
Q ss_pred CCceEEE----eeecceecCCCcccc--cCcccccccccc-cccccccchhhhcc-C-------CcEEEeceEEEEEcCC
Q psy8791 547 SSYTFTI----LILHSIVEPTDDHYY--QPMFTLIGGGMK-KLSDSRRPMKSVLP-S-------GATWVKDKIVSFDPEN 611 (706)
Q Consensus 547 ~~~~~~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~-~-------gv~~~~~~v~~id~~~ 611 (706)
+.+++.. -.-.+.+++...... ...|..+..... ..+.+...+...++ . +++++.++...+++.
T Consensus 184 ~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~vi~G~a~f~~~~- 262 (659)
T PTZ00153 184 YTYGIYTNAFKNGKNDPVERNQLVADTVQIDITKLKEYTQSVIDKLRGGIENGLKSKKFCKNSEHVQVIYERGHIVDKN- 262 (659)
T ss_pred ccCCeeeccccccccccccccccccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCceEEEEeEEEEecCC-
Confidence 1111100 000000000000000 000110000000 01112222222232 2 489999999988866
Q ss_pred CeEEc-CCCcEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHH
Q psy8791 612 NRVRT-QAGSEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYD 685 (706)
Q Consensus 612 ~~V~~-~~g~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~ 685 (706)
+|.+ .+|+++.||+||||||++|..|++++.+. . ...+......+...+++++|| |+|+|..+++
T Consensus 263 -~v~v~~~g~~i~ad~lIIATGS~P~~P~~~~~~~--~------~V~ts~d~~~l~~lpk~VvIVGgG~iGvE~A~~l~~ 333 (659)
T PTZ00153 263 -TIKSEKSGKEFKVKNIIIATGSTPNIPDNIEVDQ--K------SVFTSDTAVKLEGLQNYMGIVGMGIIGLEFMDIYTA 333 (659)
T ss_pred -eEEEccCCEEEECCEEEEcCCCCCCCCCCCCCCC--C------cEEehHHhhhhhhcCCceEEECCCHHHHHHHHHHHh
Confidence 4433 46778999999999999999887666431 1 112222222233457899999 9999988877
Q ss_pred HHhh
Q psy8791 686 LTKR 689 (706)
Q Consensus 686 ~~~~ 689 (706)
+..+
T Consensus 334 ~G~e 337 (659)
T PTZ00153 334 LGSE 337 (659)
T ss_pred CCCe
Confidence 6543
No 131
>PTZ00052 thioredoxin reductase; Provisional
Probab=99.38 E-value=7.9e-13 Score=146.72 Aligned_cols=191 Identities=15% Similarity=0.126 Sum_probs=107.0
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC-CcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD-HYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~-~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
+|||+|||||+||++||.++.++ +.+|+|||++.. ..- .....||.| ++..|.|.|.++..+..........
T Consensus 5 ~yDviVIG~GpaG~~AA~~aa~~--G~~V~lie~~~~~~~~---~~~~~GG~C-~n~gciPsK~l~~~a~~~~~~~~~~- 77 (499)
T PTZ00052 5 MYDLVVIGGGSGGMAAAKEAAAH--GKKVALFDYVKPSTQG---TKWGLGGTC-VNVGCVPKKLMHYAANIGSIFHHDS- 77 (499)
T ss_pred ccCEEEECCCHHHHHHHHHHHhC--CCeEEEEeccCCCCcc---cccccccee-ccccccchHHHHHHHHHHHHHHhHH-
Confidence 68999999999999999999998 899999996321 000 001124544 4555567665444331111100000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccc-cccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCC---Cc
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMK-KLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQA---GS 620 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~---g~ 620 (706)
..+.+ .... ...+..+..... ..+.+...+...+. .+|+++.+++.+.|.. +|.+.+ ++
T Consensus 78 -~~~g~---------~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~i~g~a~~~~~~--~v~v~~~~~~~ 141 (499)
T PTZ00052 78 -QMYGW---------KTSS----SFNWGKLVTTVQNHIRSLNFSYRTGLRSSKVEYINGLAKLKDEH--TVSYGDNSQEE 141 (499)
T ss_pred -hcCCC---------CCCC----CcCHHHHHHHHHHHHHHhhHHHHHHhhhcCcEEEEEEEEEccCC--EEEEeeCCCce
Confidence 00000 0000 000000000000 01111122222222 5899999999887654 555432 35
Q ss_pred EEeeCEEEEecCcccCccC-CCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 621 EISYEYMIVASGIQMYYDR-VKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 621 ~i~yd~lViAtGs~~~~p~-i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
.++||+||||||++|..|+ +||.++.. .+..........+++++|| |+|+|..|+++..+
T Consensus 142 ~i~~d~lIIATGs~p~~p~~i~G~~~~~---------~~~~~~~~~~~~~~~vvIIGgG~iG~E~A~~l~~~G~~ 207 (499)
T PTZ00052 142 TITAKYILIATGGRPSIPEDVPGAKEYS---------ITSDDIFSLSKDPGKTLIVGASYIGLETAGFLNELGFD 207 (499)
T ss_pred EEECCEEEEecCCCCCCCCCCCCcccee---------ecHHHHhhhhcCCCeEEEECCCHHHHHHHHHHHHcCCc
Confidence 7999999999999999884 89865311 1111222333457899999 99999999877654
No 132
>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulfide.
Probab=99.37 E-value=5.6e-13 Score=147.62 Aligned_cols=184 Identities=17% Similarity=0.186 Sum_probs=107.8
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccc-cccc
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDK-IVSF 545 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~ 545 (706)
+|||+|||||+||+++|.+|++. +.+|+|||+ +.. ||.|. +..|.|.|.++.....+.... ...+
T Consensus 1 ~yDvvVIG~G~aGl~aA~~la~~--G~~v~lie~-~~~----------GG~~~-~~gc~Psk~l~~~~~~~~~~~~~~~~ 66 (461)
T TIGR01350 1 AYDVVVIGGGPGGYVAAIRAAQL--GLKVALVEK-EYL----------GGTCL-NVGCIPTKALLHSAEVYDEIKHAKDY 66 (461)
T ss_pred CccEEEECCCHHHHHHHHHHHhC--CCeEEEEec-CCC----------CCcee-ecCccchHHHHHHhhHHHHHHHHHhc
Confidence 37999999999999999999987 889999998 321 34332 444567766655443221110 0000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccc-cccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCC-cEE
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMK-KLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAG-SEI 622 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g-~~i 622 (706)
++ +... ....+..+..... ..+.+...+..+++ .|++++.+++..+|+....|...+| .++
T Consensus 67 ----g~---------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~ 130 (461)
T TIGR01350 67 ----GI---------EVEN---VSVDWEKMQKRKNKVVKKLVGGVKGLLKKNKVTVIKGEAKFLDPGTVLVTGENGEETL 130 (461)
T ss_pred ----CC---------CCCC---CcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCEEEEecCCCcEEE
Confidence 00 0000 0000000000000 00111122233333 5899999999999876656665555 479
Q ss_pred eeCEEEEecCcccCccCCC-CchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 623 SYEYMIVASGIQMYYDRVK-GGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 623 ~yd~lViAtGs~~~~p~i~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
.||+||||||++|+.|++| +.+. . ...+..........+++++|| |+|+|..++++..
T Consensus 131 ~~d~lVlAtG~~p~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~ 194 (461)
T TIGR01350 131 TAKNIIIATGSRPRSLPGPFDFDG--E------VVITSTGALNLKEVPESLVIIGGGVIGIEFASIFASLGS 194 (461)
T ss_pred EeCEEEEcCCCCCCCCCCCCCCCC--c------eEEcchHHhccccCCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 9999999999999888876 3221 0 112222222333467899999 8899988877653
No 133
>PRK06292 dihydrolipoamide dehydrogenase; Validated
Probab=99.37 E-value=3.5e-13 Score=149.12 Aligned_cols=185 Identities=14% Similarity=0.181 Sum_probs=105.6
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
|.+|||||||||+||+++|.+|.+. +.+|+|||++. .||.|. +..|.|.|.++............
T Consensus 1 m~~yDvvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~-----------~GG~~~-~~gc~psk~l~~~~~~~~~~~~~- 65 (460)
T PRK06292 1 MEKYDVIVIGAGPAGYVAARRAAKL--GKKVALIEKGP-----------LGGTCL-NVGCIPSKALIAAAEAFHEAKHA- 65 (460)
T ss_pred CCcccEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCc-----------ccccee-ccceeeHHHHHHHHHHHHHHHHH-
Confidence 3568999999999999999999987 78999999832 134333 33456766666544221110000
Q ss_pred cCCCceEEEeeecceecCCCcccccCccccccccccc-ccccccch-hhhcc-CCcEEEeceEEEEEcCCCeEEcCCCcE
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKK-LSDSRRPM-KSVLP-SGATWVKDKIVSFDPENNRVRTQAGSE 621 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~~ 621 (706)
+.+.+ +... ....+..+...... .+.+...+ ...+. .+++++.+++..++.. ++.+ ++++
T Consensus 66 --~~~gi---------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~--~v~v-~~~~ 128 (460)
T PRK06292 66 --EEFGI---------HADG---PKIDFKKVMARVRRERDRFVGGVVEGLEKKPKIDKIKGTARFVDPN--TVEV-NGER 128 (460)
T ss_pred --HhcCC---------CcCC---CccCHHHHHHHHHHHHHHHhcchHHHHHhhCCCEEEEEEEEEccCC--EEEE-CcEE
Confidence 00000 0000 00000000000000 01111111 12222 5899999999888765 4544 6778
Q ss_pred EeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 622 ISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 622 i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+.||+||||||++ .|++||.... .. ....+......+...+++++|| |+|+|..|+++..
T Consensus 129 ~~~d~lIiATGs~--~p~ipg~~~~-~~----~~~~~~~~~~~~~~~~k~v~VIGgG~~g~E~A~~l~~~g~ 193 (460)
T PRK06292 129 IEAKNIVIATGSR--VPPIPGVWLI-LG----DRLLTSDDAFELDKLPKSLAVIGGGVIGLELGQALSRLGV 193 (460)
T ss_pred EEeCEEEEeCCCC--CCCCCCCccc-CC----CcEECchHHhCccccCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 9999999999999 6678886431 11 1122222223344567899999 8899988877653
No 134
>PRK06327 dihydrolipoamide dehydrogenase; Validated
Probab=99.37 E-value=3.5e-13 Score=149.19 Aligned_cols=194 Identities=13% Similarity=0.126 Sum_probs=107.5
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
+.||++|||+|+||++||.++++. +.+|+|||+..... .....||+| .+..|.|.|.++.....+......
T Consensus 3 ~~~DviIIG~G~aG~~aA~~~~~~--g~~v~lie~~~~~~----g~~~~Gg~c-~n~gc~P~k~l~~~a~~~~~~~~~-- 73 (475)
T PRK06327 3 KQFDVVVIGAGPGGYVAAIRAAQL--GLKVACIEAWKNPK----GKPALGGTC-LNVGCIPSKALLASSEEFENAGHH-- 73 (475)
T ss_pred cceeEEEECCCHHHHHHHHHHHhC--CCeEEEEecccCCC----CCCCcCCcc-ccccccHHHHHHHHHHHHHHHHhh--
Confidence 468999999999999999999998 78999999721000 001134544 355556777666554322111100
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccc-cccccccchhhhcc-CCcEEEeceEEEEEcC--CCeEEcC--CC
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMK-KLSDSRRPMKSVLP-SGATWVKDKIVSFDPE--NNRVRTQ--AG 619 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~--~~~V~~~--~g 619 (706)
...+.+ +... ....++.+..... ..+.+...+..+++ .+|+++.+++.+++.+ ..+|.+. ++
T Consensus 74 ~~~~G~---------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~~~v~v~~~~~ 141 (475)
T PRK06327 74 FADHGI---------HVDG---VKIDVAKMIARKDKVVKKMTGGIEGLFKKNKITVLKGRGSFVGKTDAGYEIKVTGEDE 141 (475)
T ss_pred HHhcCc---------cCCC---CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCCCCCEEEEecCCC
Confidence 000000 0000 0000000000000 01111223333444 6899999999999843 4466553 34
Q ss_pred cEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 620 SEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 620 ~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
++++||+||||||++|..+ |+.+ ... ...++......+...+++|+|| |+|+|..++++..
T Consensus 142 ~~~~~d~lViATGs~p~~~--p~~~--~~~----~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~g~ 207 (475)
T PRK06327 142 TVITAKHVIIATGSEPRHL--PGVP--FDN----KIILDNTGALNFTEVPKKLAVIGAGVIGLELGSVWRRLGA 207 (475)
T ss_pred eEEEeCEEEEeCCCCCCCC--CCCC--CCC----ceEECcHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 6899999999999999743 3332 111 1122222223334467899999 8899888876643
No 135
>PRK10262 thioredoxin reductase; Provisional
Probab=99.36 E-value=3.1e-12 Score=134.63 Aligned_cols=160 Identities=16% Similarity=0.151 Sum_probs=97.0
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
.+.+||+|||||+||++||..++++ +.++++||.... ||.+....
T Consensus 4 ~~~~~vvIIGgGpaGl~aA~~l~~~--g~~~~~ie~~~~-----------gg~~~~~~---------------------- 48 (321)
T PRK10262 4 TKHSKLLILGSGPAGYTAAVYAARA--NLQPVLITGMEK-----------GGQLTTTT---------------------- 48 (321)
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC--CCCeEEEEeecC-----------CCceecCc----------------------
Confidence 3567999999999999999999988 778999985321 12111000
Q ss_pred cCCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcC-CCcEE
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQ-AGSEI 622 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~-~g~~i 622 (706)
..+.+ |..+. ......+...+.+... .++++..++|+.|+...+.+++. +...+
T Consensus 49 -------------------~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~v~~~~~~~ 104 (321)
T PRK10262 49 -------------------EVENW-PGDPN----DLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLTGDSGEY 104 (321)
T ss_pred -------------------eECCC-CCCCC----CCCHHHHHHHHHHHHHHCCCEEEeeEEEEEEecCCeEEEEecCCEE
Confidence 00000 00000 0000111122222222 45677777888898877765443 23479
Q ss_pred eeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 623 SYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 623 ~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
.||+||||||+.|+.|++||.+.+.. +..............+++++|| |+|+|..|+++.+
T Consensus 105 ~~d~vilAtG~~~~~~~i~g~~~~~~-----~~v~~~~~~~~~~~~g~~vvVvGgG~~g~e~A~~l~~~~~ 170 (321)
T PRK10262 105 TCDALIIATGASARYLGLPSEEAFKG-----RGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIAS 170 (321)
T ss_pred EECEEEECCCCCCCCCCCCCHHHcCC-----CcEEEeecCCHHHcCCCEEEEECCCHHHHHHHHHHHhhCC
Confidence 99999999999999999999653222 1111222222333467899999 8999999887654
No 136
>PLN02172 flavin-containing monooxygenase FMO GS-OX
Probab=99.35 E-value=3.3e-12 Score=139.45 Aligned_cols=191 Identities=15% Similarity=0.206 Sum_probs=104.4
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeecccccccccc-------ccccccCCCCcccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSR-------RPMKSVLPSGATWV 538 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~-------~~~~~l~~~~~~~~ 538 (706)
..++|+|||||+||++||+.|++. +.+++|+|+++... |........ .|-+..+++. .|
T Consensus 9 ~~~~VaIIGAG~aGL~aA~~l~~~--G~~v~vfE~~~~vG----------G~W~~~~~~~~d~~~~~~~~~~~~s~-~Y- 74 (461)
T PLN02172 9 NSQHVAVIGAGAAGLVAARELRRE--GHTVVVFEREKQVG----------GLWVYTPKSESDPLSLDPTRSIVHSS-VY- 74 (461)
T ss_pred CCCCEEEECCcHHHHHHHHHHHhc--CCeEEEEecCCCCc----------ceeecCCCcCCCccccCCCCcccchh-hh-
Confidence 357899999999999999999998 78999999987642 222111100 0000000000 00
Q ss_pred cccccccCCCceEEEeeecceecCCCccc-ccCccccc------ccccccccccccchhhhcc-CCcE--E-EeceEEEE
Q psy8791 539 KDKIVSFDSSYTFTILILHSIVEPTDDHY-YQPMFTLI------GGGMKKLSDSRRPMKSVLP-SGAT--W-VKDKIVSF 607 (706)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~-~gv~--~-~~~~v~~i 607 (706)
.+ |++.+.+...-+ .-|..+.. .......+++...+..+.+ .++. + ++++|+.|
T Consensus 75 --------~~-------L~tn~p~~~m~f~dfp~~~~~~~~~~~~~~fp~~~ev~~YL~~~a~~fgl~~~I~~~t~V~~V 139 (461)
T PLN02172 75 --------ES-------LRTNLPRECMGYRDFPFVPRFDDESRDSRRYPSHREVLAYLQDFAREFKIEEMVRFETEVVRV 139 (461)
T ss_pred --------hh-------hhccCCHhhccCCCCCCCcccccccCcCCCCCCHHHHHHHHHHHHHHcCCcceEEecCEEEEE
Confidence 00 000000000000 00111100 0001122333333333333 4555 3 67899999
Q ss_pred EcCCCe--EEcCCC--c--EEeeCEEEEecC--cccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE----
Q psy8791 608 DPENNR--VRTQAG--S--EISYEYMIVASG--IQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV---- 675 (706)
Q Consensus 608 d~~~~~--V~~~~g--~--~i~yd~lViAtG--s~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi---- 675 (706)
++.... |++.++ . +..||+|||||| +.|+.|++||++++.+... +...+.. .....+|+|+||
T Consensus 140 ~~~~~~w~V~~~~~~~~~~~~~~d~VIvAtG~~~~P~~P~ipG~~~f~G~~i----Hs~~yr~-~~~~~gk~VvVVG~G~ 214 (461)
T PLN02172 140 EPVDGKWRVQSKNSGGFSKDEIFDAVVVCNGHYTEPNVAHIPGIKSWPGKQI----HSHNYRV-PDPFKNEVVVVIGNFA 214 (461)
T ss_pred eecCCeEEEEEEcCCCceEEEEcCEEEEeccCCCCCcCCCCCCcccCCceEE----EecccCC-ccccCCCEEEEECCCc
Confidence 986554 444332 2 467999999999 6899999999875443211 1111211 112367899999
Q ss_pred -cHHHHHHHHHHHhhh
Q psy8791 676 -SPEIRAKAYDLTKRK 690 (706)
Q Consensus 676 -G~E~A~~l~~~~~~~ 690 (706)
|+|+|.+|+..++++
T Consensus 215 Sg~diA~~L~~~a~~V 230 (461)
T PLN02172 215 SGADISRDIAKVAKEV 230 (461)
T ss_pred CHHHHHHHHHHhCCeE
Confidence 999999999887653
No 137
>COG0492 TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=6.3e-12 Score=128.70 Aligned_cols=99 Identities=18% Similarity=0.205 Sum_probs=70.7
Q ss_pred CCcEEEeceEEEEEcCC--CeEEcCCCcEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccE
Q psy8791 595 SGATWVKDKIVSFDPEN--NRVRTQAGSEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQY 672 (706)
Q Consensus 595 ~gv~~~~~~v~~id~~~--~~V~~~~g~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v 672 (706)
.++++...+|.+++... -.|++++++ +++++||||||+.++.|.+||..++.......+..++. ....|+|
T Consensus 74 ~~~~~~~~~v~~v~~~~~~F~v~t~~~~-~~ak~vIiAtG~~~~~~~~~~e~e~~g~gv~yc~~cdg------~~~~k~v 146 (305)
T COG0492 74 FGVEIVEDEVEKVELEGGPFKVKTDKGT-YEAKAVIIATGAGARKLGVPGEEEFEGKGVSYCATCDG------FFKGKDV 146 (305)
T ss_pred cCeEEEEEEEEEEeecCceEEEEECCCe-EEEeEEEECcCCcccCCCCCcchhhcCCceEEeeecCc------cccCCeE
Confidence 58888889999998875 357777775 99999999999999999999877655532222222222 2467789
Q ss_pred EEE-----cHHHHHHHHHHHhhhhhhhccccccccccc
Q psy8791 673 QLV-----SPEIRAKAYDLTKRKMKKEAQWIRFQEKLK 705 (706)
Q Consensus 673 vVi-----G~E~A~~l~~~~~~~~~~~~~~~~~~~~~~ 705 (706)
+|| ++|.|-.|+.++ ++...|+++++++
T Consensus 147 ~ViGgG~sAve~Al~L~~~a-----~~Vtlv~r~~~~r 179 (305)
T COG0492 147 VVIGGGDSAVEEALYLSKIA-----KKVTLVHRRDEFR 179 (305)
T ss_pred EEEcCCHHHHHHHHHHHHhc-----CeEEEEecCcccC
Confidence 999 566666665554 3467777776665
No 138
>PRK05329 anaerobic glycerol-3-phosphate dehydrogenase subunit B; Validated
Probab=99.33 E-value=9.4e-11 Score=125.72 Aligned_cols=140 Identities=9% Similarity=-0.024 Sum_probs=98.9
Q ss_pred HHcCCCCCcEEEEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCc--eEEeecEEEECCC
Q psy8791 243 RKHKKRDAAKLTYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKT--ERLPYAIMHVTPP 320 (706)
Q Consensus 243 ~~~g~~~~~~v~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g--~~i~~D~vI~a~G 320 (706)
.+.|. +|+++...+..++..++.+.+.+.+++.|++++++++|.+++.+++.+..+...++ ..+++|.+|+|+|
T Consensus 240 ~~LG~----~V~~vp~~ppslpG~rL~~aL~~~l~~~Gv~I~~g~~V~~v~~~~~~V~~v~~~~g~~~~i~AD~VVLAtG 315 (422)
T PRK05329 240 EALGC----PVFELPTLPPSVPGLRLQNALRRAFERLGGRIMPGDEVLGAEFEGGRVTAVWTRNHGDIPLRARHFVLATG 315 (422)
T ss_pred HHHCC----CEEEeCCCCCCCchHHHHHHHHHHHHhCCCEEEeCCEEEEEEEeCCEEEEEEeeCCceEEEECCEEEEeCC
Confidence 44564 39999888888876788899999999999999999999999866655544333333 4689999999999
Q ss_pred CCchhhhh-----------cCCCC--------------C----CCCceeeCcccccc------CCCCCEEEccccCCCCC
Q psy8791 321 MGPVPELA-----------TSRLV--------------D----QSGYVNVDKATLQH------VKYSNVFAIGDCSNLPT 365 (706)
Q Consensus 321 ~~~~~~~~-----------~~~l~--------------~----~~G~i~vd~~~l~~------~~~~~Ifa~GD~~~~~~ 365 (706)
..+..-+. ++.+. . ..=.+.||+ .|+. +..+||||+|++...++
T Consensus 316 rf~s~GL~a~~~~i~Epif~l~v~~~~~r~~w~~~~~~~~~p~~~~GV~~d~-~~~p~~~~g~~~~~nl~a~G~vl~g~d 394 (422)
T PRK05329 316 SFFSGGLVAERDGIREPIFGLDVLQPADRADWYQRDFFAPHPFLQFGVATDA-TLRPLDSQGGPVIENLYAAGAVLGGYD 394 (422)
T ss_pred CcccCceeccCCccccccCCCCCCCCCchhhhhhhhhccCCchhhcCceECC-CcCcccCCCCeeccceEEeeehhcCCc
Confidence 87653321 00110 0 011266776 4664 34799999999999876
Q ss_pred Cc----hHHHHHHhHHHHHHHHHHHH
Q psy8791 366 SK----TAAAVAGQCKVVYDNLSAVM 387 (706)
Q Consensus 366 ~~----~~~~a~~qg~~~a~ni~~~l 387 (706)
+. -...|...|-.++++|.+..
T Consensus 395 ~~~~~~g~Gva~~ta~~a~~~~~~~~ 420 (422)
T PRK05329 395 PIREGCGSGVALATALHAAEQIAEEA 420 (422)
T ss_pred hHHhCCCchhHHHHHHHHHHHHHHhh
Confidence 52 12367788888888887653
No 139
>TIGR03452 mycothione_red mycothione reductase. Mycothiol, a glutathione analog in Mycobacterium tuberculosis and related species, can form a disulfide-linked dimer called mycothione. This enzyme can reduce mycothione to regenerate two mycothiol molecules. The enzyme shows some sequence similarity to glutathione-disulfide reductase, trypanothione-disulfide reductase, and dihydrolipoamide dehydrogenase. The characterized protein from M. tuberculosis, a homodimer, has FAD as a cofactor, one per monomer, and uses NADPH as a substrate.
Probab=99.32 E-value=2.2e-12 Score=141.76 Aligned_cols=181 Identities=13% Similarity=0.085 Sum_probs=104.8
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
.||+||||+|+||..+|.+ .. +.+|+|||++. .||+| ++..|.|.|.|+..+..........
T Consensus 2 ~yD~vvIG~G~~g~~aa~~--~~--g~~V~lie~~~-----------~GGtC-~n~GCiPsK~l~~~a~~~~~~~~~~-- 63 (452)
T TIGR03452 2 HYDLIIIGTGSGNSIPDPR--FA--DKRIAIVEKGT-----------FGGTC-LNVGCIPTKMFVYAAEVAQSIGESA-- 63 (452)
T ss_pred CcCEEEECCCHHHHHHHHH--HC--CCeEEEEeCCC-----------CCCee-eccCccchHHHHHHHHHHHHHHHhh--
Confidence 5899999999999988543 34 78999999743 13433 4566678888777654332211100
Q ss_pred CCceEEEeeecceecCCCcccccCccccccccccc--ccccccc-hhhhc---cCCcEEEeceEEEEEcCCCeEEcCCCc
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKK--LSDSRRP-MKSVL---PSGATWVKDKIVSFDPENNRVRTQAGS 620 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~---~~gv~~~~~~v~~id~~~~~V~~~~g~ 620 (706)
.+.+. ... ....|..+...... .+.+... ..... ..||+++.+++..++ .++|.+.+|+
T Consensus 64 -~~g~~--------~~~----~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~--~~~V~~~~g~ 128 (452)
T TIGR03452 64 -RLGID--------AEI----DSVRWPDIVSRVFGDRIDPIAAGGEDYRRGDETPNIDVYDGHARFVG--PRTLRTGDGE 128 (452)
T ss_pred -ccCee--------CCC----CccCHHHHHHHhhhhHhHHHhccchHhhhhcccCCeEEEEEEEEEec--CCEEEECCCc
Confidence 00100 000 00011111111101 1111111 11111 159999999988885 4678888888
Q ss_pred EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 621 EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 621 ~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+++||+||||||++|..|++++.. .. .+.+..........+++++|| |+|+|..|+++..
T Consensus 129 ~~~~d~lIiATGs~p~~p~~~~~~----~~----~~~~~~~~~~l~~~~k~vvVIGgG~ig~E~A~~l~~~G~ 193 (452)
T TIGR03452 129 EITGDQIVIAAGSRPYIPPAIADS----GV----RYHTNEDIMRLPELPESLVIVGGGYIAAEFAHVFSALGT 193 (452)
T ss_pred EEEeCEEEEEECCCCCCCCCCCCC----CC----EEEcHHHHHhhhhcCCcEEEECCCHHHHHHHHHHHhCCC
Confidence 899999999999999887643321 10 112222222333457899999 8999998876643
No 140
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=99.28 E-value=1.2e-11 Score=138.19 Aligned_cols=158 Identities=18% Similarity=0.159 Sum_probs=99.4
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
..++||+|||||+||++||..+++. +.+++||++. .||.+..... +
T Consensus 210 ~~~~dVvIIGgGpAGl~AA~~la~~--G~~v~li~~~------------~GG~~~~~~~---~----------------- 255 (515)
T TIGR03140 210 LDPYDVLVVGGGPAGAAAAIYAARK--GLRTAMVAER------------IGGQVKDTVG---I----------------- 255 (515)
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHC--CCcEEEEecC------------CCCccccCcC---c-----------------
Confidence 4578999999999999999999997 8999999742 1222110000 0
Q ss_pred cCCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEE-eceEEEEEcCCC--eEEcCCCc
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWV-KDKIVSFDPENN--RVRTQAGS 620 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~-~~~v~~id~~~~--~V~~~~g~ 620 (706)
+ ....++ .....++...+.+.+. .|++++ ..+|+.|+.+.. .|.+.+|+
T Consensus 256 ----------------~------~~~~~~-----~~~~~~l~~~l~~~l~~~gv~i~~~~~V~~I~~~~~~~~v~~~~g~ 308 (515)
T TIGR03140 256 ----------------E------NLISVP-----YTTGSQLAANLEEHIKQYPIDLMENQRAKKIETEDGLIVVTLESGE 308 (515)
T ss_pred ----------------c------cccccC-----CCCHHHHHHHHHHHHHHhCCeEEcCCEEEEEEecCCeEEEEECCCC
Confidence 0 000000 0011122233333332 588885 468999987653 56677888
Q ss_pred EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 621 EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 621 ~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
.+.||+||+|||+.++.|++||..+.... ..............+++|+|| |+|+|..|+.+.+
T Consensus 309 ~i~~d~lIlAtGa~~~~~~ipG~~~~~~~-----~v~~~~~~~~~~~~~k~VvViGgG~~g~E~A~~L~~~g~ 376 (515)
T TIGR03140 309 VLKAKSVIVATGARWRKLGVPGEKEYIGK-----GVAYCPHCDGPFFKGKDVAVIGGGNSGIEAAIDLAGIVR 376 (515)
T ss_pred EEEeCEEEECCCCCcCCCCCCCHHHcCCC-----eEEEeeccChhhcCCCEEEEECCcHHHHHHHHHHHhcCc
Confidence 89999999999999999999996532211 111111111122357899999 9999999987654
No 141
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=99.26 E-value=1.8e-11 Score=136.81 Aligned_cols=157 Identities=17% Similarity=0.138 Sum_probs=100.2
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
..+||+|||||+||++||..+++. +.+++||++.. ||.+..... .
T Consensus 210 ~~~dvvIIGgGpaGl~aA~~la~~--G~~v~li~~~~------------GG~~~~~~~-~-------------------- 254 (517)
T PRK15317 210 DPYDVLVVGGGPAGAAAAIYAARK--GIRTGIVAERF------------GGQVLDTMG-I-------------------- 254 (517)
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC--CCcEEEEecCC------------CCeeeccCc-c--------------------
Confidence 468999999999999999999988 89999997521 222110000 0
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEE-eceEEEEEcCC--CeEEcCCCcE
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWV-KDKIVSFDPEN--NRVRTQAGSE 621 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~-~~~v~~id~~~--~~V~~~~g~~ 621 (706)
+. .+.++ .....++...+...++ .++++. ..+|++|+++. ..|.+.+|++
T Consensus 255 ---------------~~------~~~~~-----~~~~~~l~~~l~~~~~~~gv~i~~~~~V~~I~~~~~~~~V~~~~g~~ 308 (517)
T PRK15317 255 ---------------EN------FISVP-----ETEGPKLAAALEEHVKEYDVDIMNLQRASKLEPAAGLIEVELANGAV 308 (517)
T ss_pred ---------------cc------cCCCC-----CCCHHHHHHHHHHHHHHCCCEEEcCCEEEEEEecCCeEEEEECCCCE
Confidence 00 00000 0111223333333333 578885 56899998863 3567778889
Q ss_pred EeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 622 ISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 622 i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+.||+||+|||++++.|++||.+++... ..............+|+|+|| |+|+|..|+.+++
T Consensus 309 i~a~~vViAtG~~~r~~~ipG~~~~~~~-----~v~~~~~~~~~~~~gk~VvVVGgG~~g~e~A~~L~~~~~ 375 (517)
T PRK15317 309 LKAKTVILATGARWRNMNVPGEDEYRNK-----GVAYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVK 375 (517)
T ss_pred EEcCEEEECCCCCcCCCCCCCHHHhcCc-----eEEEeeccCchhcCCCEEEEECCCHHHHHHHHHHHhcCC
Confidence 9999999999999999999997543221 111111111122357899999 9999999887654
No 142
>PF00743 FMO-like: Flavin-binding monooxygenase-like; InterPro: IPR020946 Flavin-containing monooxygenases (FMOs) constitute a family of xenobiotic-metabolising enzymes []. Using an NADPH cofactor and FAD prosthetic group, these microsomal proteins catalyse the oxygenation of nucleophilic nitrogen, sulphur, phosphorous and selenium atoms in a range of structurally diverse compounds. FMOs have been implicated in the metabolism of a number of pharmaceuticals, pesticides and toxicants. In man, lack of hepatic FMO-catalysed trimethylamine metabolism results in trimethylaminuria (fish odour syndrome). Five mammalian forms of FMO are now known and have been designated FMO1-FMO5 [, , , , ]. This is a recent nomenclature based on comparison of amino acid sequences, and has been introduced in an attempt to eliminate confusion inherent in multiple, laboratory-specific designations and tissue-based classifications []. Following the determination of the complete nucleotide sequence of Saccharomyces cerevisiae (Baker's yeast) [], a novel gene was found to encode a protein with similarity to mammalian monooygenases.; GO: 0004499 flavin-containing monooxygenase activity, 0050660 flavin adenine dinucleotide binding, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 2GVC_E 1VQW_B 2GV8_B 2XVI_B 2XVH_B 2XLS_A 2XLR_A 2XLU_D 2XLP_B 2XVE_A ....
Probab=99.22 E-value=1.2e-11 Score=136.92 Aligned_cols=191 Identities=16% Similarity=0.166 Sum_probs=95.5
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccc-----
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKI----- 542 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~----- 542 (706)
++|+|||||++||++|+.|++. +.+++++|++++.. | .|.....
T Consensus 2 krVaVIGaG~sGL~a~k~l~e~--g~~~~~fE~~~~iG----------G-------------------~W~~~~~~~~g~ 50 (531)
T PF00743_consen 2 KRVAVIGAGPSGLAAAKNLLEE--GLEVTCFEKSDDIG----------G-------------------LWRYTENPEDGR 50 (531)
T ss_dssp -EEEEE--SHHHHHHHHHHHHT--T-EEEEEESSSSSS----------G-------------------GGCHSTTCCCSE
T ss_pred CEEEEECccHHHHHHHHHHHHC--CCCCeEEecCCCCC----------c-------------------cCeeCCcCCCCc
Confidence 4799999999999999999988 89999999988753 2 2211100
Q ss_pred cccCCCceEEEeeecceecCCCcccccCcccccccccccccc---cccchhhhccC-CcEEEeceEEEEEcCC-------
Q psy8791 543 VSFDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSD---SRRPMKSVLPS-GATWVKDKIVSFDPEN------- 611 (706)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-gv~~~~~~v~~id~~~------- 611 (706)
.+...+.. +........+....++.-.....+.++ +...|.+.+.. ..--++++|++|.+..
T Consensus 51 ~~~y~sl~-------~n~sk~~~~fsdfp~p~~~p~f~~~~~v~~Yl~~Ya~~f~L~~~I~fnt~V~~v~~~~d~~~~~~ 123 (531)
T PF00743_consen 51 SSVYDSLH-------TNTSKEMMAFSDFPFPEDYPDFPSHSEVLEYLESYAEHFGLRKHIRFNTEVVSVERDPDFSATGK 123 (531)
T ss_dssp GGGSTT-B--------SS-GGGSCCTTS-HCCCCSSSEBHHHHHHHHHHHHHHTTGGGGEETSEEEEEEEEETTTT-ETE
T ss_pred cccccceE-------EeeCchHhcCCCcCCCCCCCCCCCHHHHHHHHHHHHhhhCCcceEEEccEEeEeeeccccCCCce
Confidence 00000000 011111111111111111111112222 33333333331 1112567888886532
Q ss_pred CeEEcC-CC--cEEeeCEEEEecCc--ccCccC--CCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHH
Q psy8791 612 NRVRTQ-AG--SEISYEYMIVASGI--QMYYDR--VKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEI 679 (706)
Q Consensus 612 ~~V~~~-~g--~~i~yd~lViAtGs--~~~~p~--i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~ 679 (706)
..|++. +| ++-.||+||+|||. .|++|. +||++.+.+.. -+...+ ......++|+|+|| |+++
T Consensus 124 W~V~~~~~g~~~~~~fD~VvvatG~~~~P~~P~~~~~G~e~F~G~i----~HS~~y-r~~~~f~gKrVlVVG~g~Sg~DI 198 (531)
T PF00743_consen 124 WEVTTENDGKEETEEFDAVVVATGHFSKPNIPEPSFPGLEKFKGEI----IHSKDY-RDPEPFKGKRVLVVGGGNSGADI 198 (531)
T ss_dssp EEEEETTTTEEEEEEECEEEEEE-SSSCESB-----CTGGGHCSEE----EEGGG---TGGGGTTSEEEEESSSHHHHHH
T ss_pred EEEEeecCCeEEEEEeCeEEEcCCCcCCCCCChhhhhhhhcCCeeE----EccccC-cChhhcCCCEEEEEeCCHhHHHH
Confidence 345554 34 24579999999996 688884 89998765532 122222 22334578999999 9999
Q ss_pred HHHHHHHHhhh--hhhhccccccc
Q psy8791 680 RAKAYDLTKRK--MKKEAQWIRFQ 701 (706)
Q Consensus 680 A~~l~~~~~~~--~~~~~~~~~~~ 701 (706)
|.+++..++++ ..|...||-++
T Consensus 199 a~el~~~a~~v~~s~R~~~wv~pr 222 (531)
T PF00743_consen 199 AVELSRVAKKVYLSTRRGAWVLPR 222 (531)
T ss_dssp HHHHTTTSCCEEEECC--------
T ss_pred HHHHHHhcCCeEEEEecccccccc
Confidence 99998877663 35666676543
No 143
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes the FAD binding domain which has a nested NADH binding domain and is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3IC9_A 1Q1W_A 3LB8_A 1Q1R_B 3GD4_A 1GV4_A 3GD3_A 2EQ9_E 2EQ6_B 2EQ8_E ....
Probab=99.21 E-value=4e-12 Score=124.22 Aligned_cols=78 Identities=31% Similarity=0.501 Sum_probs=54.9
Q ss_pred CCcEE-EeceEEEEEcCCCeE----------EcCCCcEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccch
Q psy8791 595 SGATW-VKDKIVSFDPENNRV----------RTQAGSEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTV 663 (706)
Q Consensus 595 ~gv~~-~~~~v~~id~~~~~V----------~~~~g~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~ 663 (706)
.++++ +.+++.+|+...+.+ ...++.++.||+||||||+.|+.|++||.+ .. ...+...+.....
T Consensus 71 ~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~~~~~~i~g~~-~~---~~~~~~~~~~~~~ 146 (201)
T PF07992_consen 71 RGVEIRLNAKVVSIDPESKRVVCPAVTIQVVETGDGREIKYDYLVIATGSRPRTPNIPGEE-VA---YFLRGVDDAQRFL 146 (201)
T ss_dssp HTHEEEHHHTEEEEEESTTEEEETCEEEEEEETTTEEEEEEEEEEEESTEEEEEESSTTTT-TE---CBTTSEEHHHHHH
T ss_pred ceEEEeeccccccccccccccccCcccceeeccCCceEecCCeeeecCccccceeecCCCc-cc---ccccccccccccc
Confidence 58888 778999999988842 234567899999999999999999999973 11 1112233333333
Q ss_pred hhhccCccEEEEc
Q psy8791 664 TWEQKHKQYQLVS 676 (706)
Q Consensus 664 ~~~~~~k~vvViG 676 (706)
.....+++|+|||
T Consensus 147 ~~~~~~~~v~VvG 159 (201)
T PF07992_consen 147 ELLESPKRVAVVG 159 (201)
T ss_dssp THSSTTSEEEEES
T ss_pred ccccccccccccc
Confidence 4444566899999
No 144
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A ....
Probab=99.18 E-value=2.2e-11 Score=119.14 Aligned_cols=94 Identities=15% Similarity=0.154 Sum_probs=51.5
Q ss_pred CCcEE-EeceEEEEEcCCC--eEEcCCCcEEeeCEEEEecCc--ccCccCCCCchhhhcccccccccccCccchhhhccC
Q psy8791 595 SGATW-VKDKIVSFDPENN--RVRTQAGSEISYEYMIVASGI--QMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKH 669 (706)
Q Consensus 595 ~gv~~-~~~~v~~id~~~~--~V~~~~g~~i~yd~lViAtGs--~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (706)
.++++ ++.+|+++..+.. .|++.+++++.+|+||+|||. .|++|.+||.. ... .+............+
T Consensus 95 ~~l~i~~~~~V~~v~~~~~~w~v~~~~~~~~~a~~VVlAtG~~~~p~~p~~~g~~--~~~-----~~h~~~~~~~~~~~~ 167 (203)
T PF13738_consen 95 FGLEIRFNTRVESVRRDGDGWTVTTRDGRTIRADRVVLATGHYSHPRIPDIPGSA--FRP-----IIHSADWRDPEDFKG 167 (203)
T ss_dssp TTGGEETS--EEEEEEETTTEEEEETTS-EEEEEEEEE---SSCSB---S-TTGG--CSE-----EEEGGG-STTGGCTT
T ss_pred cCcccccCCEEEEEEEeccEEEEEEEecceeeeeeEEEeeeccCCCCcccccccc--ccc-----eEehhhcCChhhcCC
Confidence 46666 4578999987654 678888889999999999995 88888899911 111 112211122223467
Q ss_pred ccEEEE-----cHHHHHHHHHHHhhhhhhhcccccc
Q psy8791 670 KQYQLV-----SPEIRAKAYDLTKRKMKKEAQWIRF 700 (706)
Q Consensus 670 k~vvVi-----G~E~A~~l~~~~~~~~~~~~~~~~~ 700 (706)
|+|+|| |+|+|..|.+.+ ++..|+.+
T Consensus 168 k~V~VVG~G~SA~d~a~~l~~~g-----~~V~~~~R 198 (203)
T PF13738_consen 168 KRVVVVGGGNSAVDIAYALAKAG-----KSVTLVTR 198 (203)
T ss_dssp SEEEEE--SHHHHHHHHHHTTTC-----SEEEEEES
T ss_pred CcEEEEcChHHHHHHHHHHHhhC-----CEEEEEec
Confidence 899999 666666555443 45555443
No 145
>PRK12831 putative oxidoreductase; Provisional
Probab=99.13 E-value=8.1e-11 Score=129.40 Aligned_cols=152 Identities=16% Similarity=0.202 Sum_probs=90.5
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
..++|+|||||+||+++|..|+++ +.+|+|+|+.+.. ||.+... +|-
T Consensus 139 ~~~~V~IIG~GpAGl~aA~~l~~~--G~~V~v~e~~~~~----------GG~l~~g---ip~------------------ 185 (464)
T PRK12831 139 KGKKVAVIGSGPAGLTCAGDLAKM--GYDVTIFEALHEP----------GGVLVYG---IPE------------------ 185 (464)
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC--CCeEEEEecCCCC----------CCeeeec---CCC------------------
Confidence 457999999999999999999998 8999999975542 2221100 000
Q ss_pred CCCceEEEeeecceecCCCcccccCccccccccccccccccc-chhhhccCCcEEEeceEEEEEcCCCeEEcCCC-cEEe
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRR-PMKSVLPSGATWVKDKIVSFDPENNRVRTQAG-SEIS 623 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g-~~i~ 623 (706)
+. .+.+++.. ....+...|+++..++... +.+.+++. +.+.
T Consensus 186 ---------------------~~-----------l~~~~~~~~~~~~~~~~gv~i~~~~~v~-----~~v~~~~~~~~~~ 228 (464)
T PRK12831 186 ---------------------FR-----------LPKETVVKKEIENIKKLGVKIETNVVVG-----KTVTIDELLEEEG 228 (464)
T ss_pred ---------------------cc-----------CCccHHHHHHHHHHHHcCCEEEcCCEEC-----CcCCHHHHHhccC
Confidence 00 00011111 1222233688886665331 23444343 3467
Q ss_pred eCEEEEecCc-ccCccCCCCchhhhcccccccccccC------cc--chhhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 624 YEYMIVASGI-QMYYDRVKGGTTSLEDRGKMRGVSDG------FS--TVTWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 624 yd~lViAtGs-~~~~p~i~G~~~~~~~~~~~~~~~~~------~~--~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
||+||||||+ .|+.+++||.+ ...+.....++.. +. .......+++|+|| |+|+|..+.++..+
T Consensus 229 ~d~viiAtGa~~~~~l~ipG~~--~~gV~~~~~~l~~~~~~~~~~~~~~~~~~~gk~VvVIGgG~va~d~A~~l~r~Ga~ 306 (464)
T PRK12831 229 FDAVFIGSGAGLPKFMGIPGEN--LNGVFSANEFLTRVNLMKAYKPEYDTPIKVGKKVAVVGGGNVAMDAARTALRLGAE 306 (464)
T ss_pred CCEEEEeCCCCCCCCCCCCCcC--CcCcEEHHHHHHHHHhcccccccccCcccCCCeEEEECCcHHHHHHHHHHHHcCCE
Confidence 9999999999 68889999975 2222222222111 00 00112357899999 88988888877643
No 146
>COG2081 Predicted flavoproteins [General function prediction only]
Probab=99.12 E-value=3e-09 Score=108.83 Aligned_cols=66 Identities=11% Similarity=0.175 Sum_probs=52.1
Q ss_pred EeCCCcCCC----chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCC
Q psy8791 256 CTGMGVLFP----SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMG 322 (706)
Q Consensus 256 ~~~~~~~~~----~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~ 322 (706)
.....++|| ...+.+.+.+++++.||+++++++|.+++.++....+ .+.+|+++.||.+|+|+|-.
T Consensus 97 e~~~Gr~Fp~sdkA~~Iv~~ll~~~~~~gV~i~~~~~v~~v~~~~~~f~l-~t~~g~~i~~d~lilAtGG~ 166 (408)
T COG2081 97 EEDLGRMFPDSDKASPIVDALLKELEALGVTIRTRSRVSSVEKDDSGFRL-DTSSGETVKCDSLILATGGK 166 (408)
T ss_pred EccCceecCCccchHHHHHHHHHHHHHcCcEEEecceEEeEEecCceEEE-EcCCCCEEEccEEEEecCCc
Confidence 344556676 3567788889999999999999999999987644444 45578899999999999943
No 147
>KOG1346|consensus
Probab=99.10 E-value=2.8e-10 Score=114.76 Aligned_cols=184 Identities=16% Similarity=0.239 Sum_probs=109.0
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
++...+|||+|.+..++++.++.++++.++.+|..++..+| +++|| |++.|--.+-.+.
T Consensus 177 ~hvp~liigggtaAfaa~rai~s~da~A~vl~iseepelPY----------------mRPPL-----SKELW~~~dpn~~ 235 (659)
T KOG1346|consen 177 KHVPYLIIGGGTAAFAAFRAIKSNDATAKVLMISEEPELPY----------------MRPPL-----SKELWWYGDPNSA 235 (659)
T ss_pred ccCceeEEcCCchhhhcccccccCCCCceEEeeccCccCcc----------------cCCCc-----chhceecCCCChh
Confidence 45568999999999999999999988899999988776554 34454 2233311111000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhccCCcEEEec-eEEEEEcCCCeEEcCCCcEEee
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKD-KIVSFDPENNRVRTQAGSEISY 624 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~id~~~~~V~~~~g~~i~y 624 (706)
.. |.+..+-...+..++.|...++. . .++.....-||.+++| +|+.||.+.+.|++.||.+|.|
T Consensus 236 -k~-----lrfkqwsGkeRsiffepd~Ffvs-----p----eDLp~~~nGGvAvl~G~kvvkid~~d~~V~LnDG~~I~Y 300 (659)
T KOG1346|consen 236 -KK-----LRFKQWSGKERSIFFEPDGFFVS-----P----EDLPKAVNGGVAVLRGRKVVKIDEEDKKVILNDGTTIGY 300 (659)
T ss_pred -hh-----eeecccCCccceeEecCCcceeC-----h----hHCcccccCceEEEeccceEEeecccCeEEecCCcEeeh
Confidence 00 01111222222222222111111 0 1111122247888877 6999999999999999999999
Q ss_pred CEEEEecCcccCccCCCCchhhhccc----ccccccccCcc-chhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 625 EYMIVASGIQMYYDRVKGGTTSLEDR----GKMRGVSDGFS-TVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 625 d~lViAtGs~~~~p~i~G~~~~~~~~----~~~~~~~~~~~-~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
|+++||||.+|...+ -+++....+ ..++.. ..+. ........++|.|| |.|+|..|.+...
T Consensus 301 dkcLIATG~~Pk~l~--~~~~A~~evk~kit~fr~p-~DF~rlek~~aek~siTIiGnGflgSELacsl~rk~r 371 (659)
T KOG1346|consen 301 DKCLIATGVRPKKLQ--VFEEASEEVKQKITYFRYP-ADFKRLEKGLAEKQSITIIGNGFLGSELACSLKRKYR 371 (659)
T ss_pred hheeeecCcCcccch--hhhhcCHHhhhheeEEecc-hHHHHHHHhhhhcceEEEEcCcchhhhHHHHHHHhhh
Confidence 999999999998543 222222211 111111 1111 12222345789999 9999999988765
No 148
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric. This protein is homologous to the small subunit of NADPH and NADH forms of glutamate synthase as found in eukaryotes and some bacteria. This protein is found in numerous species having no homolog of the glutamate synthase large subunit. The prototype of the family, from Pyrococcus sp. KOD1, was shown to be active as a homotetramer and to require NADPH.
Probab=99.07 E-value=1.4e-10 Score=127.39 Aligned_cols=149 Identities=15% Similarity=0.147 Sum_probs=89.5
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
+.++|+|||+|+||+++|..|++. +.+|+|||+++... |..... .|-
T Consensus 132 ~~~~V~IIG~G~aGl~aA~~l~~~--G~~V~vie~~~~~G----------G~l~~g---ip~------------------ 178 (449)
T TIGR01316 132 THKKVAVIGAGPAGLACASELAKA--GHSVTVFEALHKPG----------GVVTYG---IPE------------------ 178 (449)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHC--CCcEEEEecCCCCC----------cEeeec---CCC------------------
Confidence 457999999999999999999987 88999999865421 111000 000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccc-cchhhhccCCcEEEeceEEEEEcCCCeEEcCCCcEEee
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSR-RPMKSVLPSGATWVKDKIVSFDPENNRVRTQAGSEISY 624 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~y 624 (706)
.....++. .....+...|+++..++++ .+.|.+.+. ...|
T Consensus 179 ---------------------------------~~~~~~~~~~~~~~l~~~gv~~~~~~~v-----~~~v~~~~~-~~~y 219 (449)
T TIGR01316 179 ---------------------------------FRLPKEIVVTEIKTLKKLGVTFRMNFLV-----GKTATLEEL-FSQY 219 (449)
T ss_pred ---------------------------------ccCCHHHHHHHHHHHHhCCcEEEeCCcc-----CCcCCHHHH-HhhC
Confidence 00000111 1122233468998777643 234555443 3579
Q ss_pred CEEEEecCc-ccCccCCCCchhhhcccccccccccCccc---------hhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 625 EYMIVASGI-QMYYDRVKGGTTSLEDRGKMRGVSDGFST---------VTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 625 d~lViAtGs-~~~~p~i~G~~~~~~~~~~~~~~~~~~~~---------~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
|+||||||+ .|..|++||.+ ...+.....++..... ......+++|+|| |+|+|..+.++..
T Consensus 220 d~viiAtGa~~p~~~~ipG~~--~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~gk~VvVIGgG~~a~d~A~~l~~~G~ 296 (449)
T TIGR01316 220 DAVFIGTGAGLPKLMNIPGEE--LCGVYSANDFLTRANLMKAYEFPHADTPVYAGKSVVVIGGGNTAVDSARTALRLGA 296 (449)
T ss_pred CEEEEeCCCCCCCcCCCCCCC--CCCcEEHHHHHHHHhhcccccccccCCcccCCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 999999998 68888999975 2222222222111000 0011256899999 8899988877664
No 149
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]
Probab=99.06 E-value=1.1e-09 Score=119.13 Aligned_cols=160 Identities=17% Similarity=0.207 Sum_probs=104.4
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHhhcCCCe-EEEEcCCCCc-------ccC------ccc----ccccC---ccccCcc
Q psy8791 27 SSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQ-VSIVEPTDDH-------YYQ------PMF----TLIGG---GMKKLSD 85 (706)
Q Consensus 27 ~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~-Vtlie~~~~~-------~~~------p~~----~~~~~---~~~~~~~ 85 (706)
....++|+|||||++||++|++|++. +.. ++++|+++.. .|. |.+ +..+. .......
T Consensus 5 ~~~~~~v~IIGaG~sGlaaa~~L~~~--g~~~~~i~Ek~~~~Gg~W~~~ry~~l~~~~p~~~~~~~~~p~~~~~~~~~~~ 82 (443)
T COG2072 5 VATHTDVAIIGAGQSGLAAAYALKQA--GVPDFVIFEKRDDVGGTWRYNRYPGLRLDSPKWLLGFPFLPFRWDEAFAPFA 82 (443)
T ss_pred cCCcccEEEECCCHHHHHHHHHHHHc--CCCcEEEEEccCCcCCcchhccCCceEECCchheeccCCCccCCcccCCCcc
Confidence 34568999999999999999999999 666 9999999641 121 111 11110 0000000
Q ss_pred -cccccccccC-C----CcEEEE-ceeEEEEcCCC--EEEeCCCeE--EEecEEEEccc--cccccCCCCCCcccccccc
Q psy8791 86 -SRRPMKSVLP-S----GATWVK-DKIVSFDPENN--RVRTQAGSE--ISYEYMIVASG--IQMYYDRVKGPSALINALG 152 (706)
Q Consensus 86 -~~~~~~~~~~-~----~v~~i~-~~v~~id~~~~--~v~~~~g~~--~~yd~lviAtG--~~~~~~~~~g~~~~~~~~~ 152 (706)
+...+...+. + .+++.. .++...+.+.+ +|+++++.+ +.+|+||+||| +.|+.|.++|.
T Consensus 83 ~~~~y~~~~~~~y~~~~~i~~~~~v~~~~~~~~~~~w~V~~~~~~~~~~~a~~vV~ATG~~~~P~iP~~~G~-------- 154 (443)
T COG2072 83 EIKDYIKDYLEKYGLRFQIRFNTRVEVADWDEDTKRWTVTTSDGGTGELTADFVVVATGHLSEPYIPDFAGL-------- 154 (443)
T ss_pred cHHHHHHHHHHHcCceeEEEcccceEEEEecCCCCeEEEEEcCCCeeeEecCEEEEeecCCCCCCCCCCCCc--------
Confidence 0000111111 2 233322 23334444333 577777755 55999999999 57788888884
Q ss_pred cccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhcc
Q psy8791 153 HCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQ 212 (706)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 212 (706)
..|.++.+|+.+ +.+..+..+|+|..+....++.++...+....
T Consensus 155 ------------~~f~g~~~HS~~----~~~~~~~~GKrV~VIG~GaSA~di~~~l~~~g 198 (443)
T COG2072 155 ------------DEFKGRILHSAD----WPNPEDLRGKRVLVIGAGASAVDIAPELAEVG 198 (443)
T ss_pred ------------cCCCceEEchhc----CCCccccCCCeEEEECCCccHHHHHHHHHhcC
Confidence 357788888776 77778888889999999999999988888765
No 150
>COG2081 Predicted flavoproteins [General function prediction only]
Probab=99.05 E-value=2e-10 Score=117.41 Aligned_cols=147 Identities=18% Similarity=0.295 Sum_probs=93.5
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCC----------
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSG---------- 534 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~---------- 534 (706)
|.++||+|||||+||+.||..+.++ +.+|+|||+++...-.. -..+||.|+..+... .+.++..=
T Consensus 1 ~~~~dviIIGgGpAGlMaA~~aa~~--G~~V~lid~~~k~GrKi--l~sGgGrCN~Tn~~~-~~~~ls~~p~~~~fl~sa 75 (408)
T COG2081 1 MERFDVIIIGGGPAGLMAAISAAKA--GRRVLLIDKGPKLGRKI--LMSGGGRCNFTNSEA-PDEFLSRNPGNGHFLKSA 75 (408)
T ss_pred CCcceEEEECCCHHHHHHHHHHhhc--CCEEEEEecCcccccee--EecCCCCcccccccc-HHHHHHhCCCcchHHHHH
Confidence 3568999999999999999999998 89999999988765322 235788888877655 33333221
Q ss_pred -cccccccccccCCCceEEEeeecceecCCCcccccCcccccccccccc----cccccchhh-hccCCcEE-EeceEEEE
Q psy8791 535 -ATWVKDKIVSFDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKL----SDSRRPMKS-VLPSGATW-VKDKIVSF 607 (706)
Q Consensus 535 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~gv~~-~~~~v~~i 607 (706)
..|.+.|+.++..++++. +.+.+ .+.+++. +++.+.+.. +.+.||++ .+.+|.+|
T Consensus 76 l~~ft~~d~i~~~e~~Gi~------~~e~~------------~Gr~Fp~sdkA~~Iv~~ll~~~~~~gV~i~~~~~v~~v 137 (408)
T COG2081 76 LARFTPEDFIDWVEGLGIA------LKEED------------LGRMFPDSDKASPIVDALLKELEALGVTIRTRSRVSSV 137 (408)
T ss_pred HHhCCHHHHHHHHHhcCCe------eEEcc------------CceecCCccchHHHHHHHHHHHHHcCcEEEecceEEeE
Confidence 112333433333333321 11111 1111221 222222222 22369998 67899999
Q ss_pred EcCC--CeEEcCCCcEEeeCEEEEecCcc
Q psy8791 608 DPEN--NRVRTQAGSEISYEYMIVASGIQ 634 (706)
Q Consensus 608 d~~~--~~V~~~~g~~i~yd~lViAtGs~ 634 (706)
+.+. -.+.+.+|+++.+|.||||||..
T Consensus 138 ~~~~~~f~l~t~~g~~i~~d~lilAtGG~ 166 (408)
T COG2081 138 EKDDSGFRLDTSSGETVKCDSLILATGGK 166 (408)
T ss_pred EecCceEEEEcCCCCEEEccEEEEecCCc
Confidence 8875 46788889899999999999954
No 151
>TIGR03385 CoA_CoA_reduc CoA-disulfide reductase. Members of this protein family are CoA-disulfide reductase (EC 1.8.1.14), as characterized in Staphylococcus aureus, Pyrococcus horikoshii, and Borrelia burgdorferi, and inferred in several other species on the basis of high levels of CoA and an absence of glutathione as a protective thiol.
Probab=99.05 E-value=3.9e-10 Score=123.66 Aligned_cols=146 Identities=14% Similarity=0.215 Sum_probs=93.1
Q ss_pred HHHHHHHhhcCCCcEEEECCCCCCcCCcc-eEEeeccccccccccccccccCCCCcccccccccccCCCceEEEeeecce
Q psy8791 481 SMAAKFTSRLGKGQVSIVEPTDDHYYQPM-FTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDSSYTFTILILHSI 559 (706)
Q Consensus 481 ~~a~~l~~~~~~~~i~vid~~~~~~~~~~-~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (706)
+||.+|++..++.+|+|||+++++.|.|. ++.+.+|......
T Consensus 1 saA~~l~~~~~~~~Vtlid~~~~~~~~~~~l~~~~~g~~~~~~------------------------------------- 43 (427)
T TIGR03385 1 SAASRVRRLDKESDIIVFEKTEDVSFANCGLPYVIGGVIDDRN------------------------------------- 43 (427)
T ss_pred CHHHHHHhhCCCCcEEEEEcCCceeEEcCCCCeEeccccCCHH-------------------------------------
Confidence 47889998877899999999998887763 4433333211000
Q ss_pred ecCCCcccccCcccccccccccccccccchhhh-ccCCcEE-EeceEEEEEcCCCeEEcCC---CcEEe--eCEEEEecC
Q psy8791 560 VEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSV-LPSGATW-VKDKIVSFDPENNRVRTQA---GSEIS--YEYMIVASG 632 (706)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gv~~-~~~~v~~id~~~~~V~~~~---g~~i~--yd~lViAtG 632 (706)
+.+......+ ...|+++ ++++|+.||+++++|.+.+ ++++. ||+||||||
T Consensus 44 -----------------------~~~~~~~~~~~~~~gv~~~~~~~V~~id~~~~~v~~~~~~~~~~~~~~yd~lIiATG 100 (427)
T TIGR03385 44 -----------------------KLLAYTPEVFIKKRGIDVKTNHEVIEVNDERQTVVVRNNKTNETYEESYDYLILSPG 100 (427)
T ss_pred -----------------------HcccCCHHHHHHhcCCeEEecCEEEEEECCCCEEEEEECCCCCEEecCCCEEEECCC
Confidence 0011112233 2358888 4779999999999887653 45778 999999999
Q ss_pred cccCccCCCCchhhhcccccccccccCccchhh--hccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 633 IQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTW--EQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 633 s~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
++|..|++||++ ...+...+...+....... ...+++|+|| |+|+|..|++...
T Consensus 101 ~~p~~~~i~G~~--~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~ 161 (427)
T TIGR03385 101 ASPIVPNIEGIN--LDIVFTLRNLEDTDAIKQYIDKNKVENVVIIGGGYIGIEMAEALRERGK 161 (427)
T ss_pred CCCCCCCCCCcC--CCCEEEECCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCC
Confidence 999999999975 1222222221111111111 1356889999 8898888876543
No 152
>KOG1399|consensus
Probab=99.01 E-value=1.4e-09 Score=116.70 Aligned_cols=188 Identities=16% Similarity=0.067 Sum_probs=101.3
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
.++|+|||||+|||.+|+.|++. +.+++++|+.+...-.+.+..... .. .-+..
T Consensus 6 ~~~vaIIGAG~sGL~~ar~l~~~--g~~v~vfEr~~~iGGlW~y~~~~~------~~------------------~ss~Y 59 (448)
T KOG1399|consen 6 SKDVAVIGAGPAGLAAARELLRE--GHEVVVFERTDDIGGLWKYTENVE------VV------------------HSSVY 59 (448)
T ss_pred CCceEEECcchHHHHHHHHHHHC--CCCceEEEecCCccceEeecCccc------cc------------------ccchh
Confidence 46899999999999999999998 899999999877541111100000 00 00000
Q ss_pred CCceEEEeeecceecCCCcccccCccccc-cccccccccc---ccchhhhccCCcEE-EeceEEEEEcCC---CeEEcCC
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLI-GGGMKKLSDS---RRPMKSVLPSGATW-VKDKIVSFDPEN---NRVRTQA 618 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~gv~~-~~~~v~~id~~~---~~V~~~~ 618 (706)
.+. .+| +.+.-..+....++.. .....+..++ ...+++.+.....+ ++.+|..+++.. ..|.+.+
T Consensus 60 ~~l-----~tn--~pKe~~~~~dfpf~~~~~~~~p~~~e~~~YL~~yA~~F~l~~~i~f~~~v~~v~~~~~gkW~V~~~~ 132 (448)
T KOG1399|consen 60 KSL-----RTN--LPKEMMGYSDFPFPERDPRYFPSHREVLEYLRDYAKHFDLLKMINFNTEVVRVDSIDKGKWRVTTKD 132 (448)
T ss_pred hhh-----hcc--CChhhhcCCCCCCcccCcccCCCHHHHHHHHHHHHHhcChhhheEecccEEEEeeccCCceeEEEec
Confidence 000 000 0000000111111111 1111122222 22333333322233 566677777654 3565544
Q ss_pred C----cEEeeCEEEEecCcc--cCccCCCCc--hhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHH
Q psy8791 619 G----SEISYEYMIVASGIQ--MYYDRVKGG--TTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYD 685 (706)
Q Consensus 619 g----~~i~yd~lViAtGs~--~~~p~i~G~--~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~ 685 (706)
+ ++.-||.|++|||.. |+.|.+||. +.+.+. -.++..-........|+|+|| |.|++-.++.
T Consensus 133 ~~~~~~~~ifd~VvVctGh~~~P~~P~~~g~~~~~f~G~-----~iHS~~Yk~~e~f~~k~VlVIG~g~SG~DIs~d~~~ 207 (448)
T KOG1399|consen 133 NGTQIEEEIFDAVVVCTGHYVEPRIPQIPGPGIESFKGK-----IIHSHDYKSPEKFRDKVVLVVGCGNSGMDISLDLLR 207 (448)
T ss_pred CCcceeEEEeeEEEEcccCcCCCCCCcCCCCchhhcCCc-----ceehhhccCcccccCceEEEECCCccHHHHHHHHHH
Confidence 3 477899999999986 888989884 343332 222211111222356889999 9999999888
Q ss_pred HHhhhhh
Q psy8791 686 LTKRKMK 692 (706)
Q Consensus 686 ~~~~~~~ 692 (706)
.++++..
T Consensus 208 ~ak~v~~ 214 (448)
T KOG1399|consen 208 VAKEVHL 214 (448)
T ss_pred hccCcce
Confidence 8876543
No 153
>TIGR03378 glycerol3P_GlpB glycerol-3-phosphate dehydrogenase, anaerobic, B subunit. Members of this protein family are the B subunit, product of the glpB gene, of a three-subunit, membrane-anchored, FAD-dependent anaerobic glycerol-3-phosphate dehydrogenase.
Probab=99.00 E-value=1.9e-08 Score=106.66 Aligned_cols=130 Identities=12% Similarity=0.019 Sum_probs=91.2
Q ss_pred EEEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCc--eEEeecEEEECCCCC-chhhhhc
Q psy8791 253 LTYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKT--ERLPYAIMHVTPPMG-PVPELAT 329 (706)
Q Consensus 253 v~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g--~~i~~D~vI~a~G~~-~~~~~~~ 329 (706)
|..+-..|.-++...+.+.+.+.++++|++++.+++|.++..+++.++.+.++++ .++.+|.+|+|+|.+ +..++.+
T Consensus 250 v~E~ptlPPSv~G~RL~~aL~~~~~~~Gg~il~g~~V~~i~~~~~~v~~V~t~~g~~~~l~AD~vVLAaGaw~S~gL~a~ 329 (419)
T TIGR03378 250 LCELPTMPPSLLGIRLEEALKHRFEQLGGVMLPGDRVLRAEFEGNRVTRIHTRNHRDIPLRADHFVLASGSFFSNGLVAE 329 (419)
T ss_pred EEeCCCCCCCCcHHHHHHHHHHHHHHCCCEEEECcEEEEEEeeCCeEEEEEecCCccceEECCEEEEccCCCcCHHHHhh
Confidence 5555444444445788999999999999999999999998876666665554454 479999999999999 6655443
Q ss_pred C--------CC--C--------------C----CCCceeeCccccccC----CCCCEEEccccCCCCCCc----hHHHHH
Q psy8791 330 S--------RL--V--------------D----QSGYVNVDKATLQHV----KYSNVFAIGDCSNLPTSK----TAAAVA 373 (706)
Q Consensus 330 ~--------~l--~--------------~----~~G~i~vd~~~l~~~----~~~~Ifa~GD~~~~~~~~----~~~~a~ 373 (706)
. +| . + -.=.|.||+ .|+.. -++|+||+|-+....++. -...|+
T Consensus 330 l~~i~Epif~L~v~~~~~r~~W~~~~ff~~~p~~~~GV~~d~-~lrp~~~g~~~~Nl~a~G~vL~G~d~~~~gcG~GVai 408 (419)
T TIGR03378 330 FDKIYEPIFGLDVLQLPDRDQWYQHRFFAPHPFMQFGVKTDA-QLRPSRGGQTIENLYAIGAVLGGYDPIFEGCGSGVAV 408 (419)
T ss_pred cCceeeeccCCCcCCCcchhhhcchhhcCCChhhhcCceEcc-ccCccCCCcccccceEechhhcCCChHhcCCCchhHH
Confidence 2 11 0 1 011267887 57732 279999999888876652 123567
Q ss_pred HhHHHHHHHH
Q psy8791 374 GQCKVVYDNL 383 (706)
Q Consensus 374 ~qg~~~a~ni 383 (706)
..|-.+|++|
T Consensus 409 ~Ta~~aa~~i 418 (419)
T TIGR03378 409 STALHAAEQI 418 (419)
T ss_pred HHHHHHHHhh
Confidence 7777777776
No 154
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional
Probab=99.00 E-value=4.2e-10 Score=132.54 Aligned_cols=149 Identities=17% Similarity=0.165 Sum_probs=92.1
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
.++|+|||||+||++||..|++. +++|+|+|+.+.. ||..... +|
T Consensus 306 gkkVaVIGsGPAGLsaA~~Lar~--G~~VtVfE~~~~~----------GG~l~yG---IP-------------------- 350 (944)
T PRK12779 306 KPPIAVVGSGPSGLINAYLLAVE--GFPVTVFEAFHDL----------GGVLRYG---IP-------------------- 350 (944)
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCeEEEEeeCCCC----------CceEEcc---CC--------------------
Confidence 56899999999999999999998 8999999986543 2321100 00
Q ss_pred CCceEEEeeecceecCCCcccccCcccccccccccccccc-cchhhhccCCcEEEeceEEEEEcCCCeEEcCCCcEEeeC
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSR-RPMKSVLPSGATWVKDKIVSFDPENNRVRTQAGSEISYE 625 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~yd 625 (706)
..+-..++. .....+...|++|..+.... +.+++++.....||
T Consensus 351 -------------------------------~~rlp~~vi~~~i~~l~~~Gv~f~~n~~vG-----~dit~~~l~~~~yD 394 (944)
T PRK12779 351 -------------------------------EFRLPNQLIDDVVEKIKLLGGRFVKNFVVG-----KTATLEDLKAAGFW 394 (944)
T ss_pred -------------------------------CCcChHHHHHHHHHHHHhhcCeEEEeEEec-----cEEeHHHhccccCC
Confidence 000001111 12233334689886665432 34666666667899
Q ss_pred EEEEecCc-ccCccCCCCchhhhcccccccccccCccc----------hhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 626 YMIVASGI-QMYYDRVKGGTTSLEDRGKMRGVSDGFST----------VTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 626 ~lViAtGs-~~~~p~i~G~~~~~~~~~~~~~~~~~~~~----------~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+||||||+ .|+.++|||.+ ..++.....++..... ......+|+|+|| |+|+|..+.++..
T Consensus 395 AV~LAtGA~~pr~l~IpG~d--l~GV~~a~dfL~~~~~~~~~~~~~~~~~~~~~Gk~VvVIGGG~tA~D~A~ta~R~Ga 471 (944)
T PRK12779 395 KIFVGTGAGLPTFMNVPGEH--LLGVMSANEFLTRVNLMRGLDDDYETPLPEVKGKEVFVIGGGNTAMDAARTAKRLGG 471 (944)
T ss_pred EEEEeCCCCCCCcCCCCCCc--CcCcEEHHHHHHHHHhhccccccccccccccCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 99999999 58888999964 3332222222211000 0011256899999 7888888877664
No 155
>PRK12770 putative glutamate synthase subunit beta; Provisional
Probab=98.98 E-value=5.8e-10 Score=118.80 Aligned_cols=36 Identities=17% Similarity=0.270 Sum_probs=31.9
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.++|+|||+|++|+++|..|++. +.+|++||+.+..
T Consensus 18 ~~~VvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~~ 53 (352)
T PRK12770 18 GKKVAIIGAGPAGLAAAGYLACL--GYEVHVYDKLPEP 53 (352)
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCCCC
Confidence 45899999999999999999987 7899999986643
No 156
>COG0446 HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]
Probab=98.98 E-value=1.2e-09 Score=119.49 Aligned_cols=155 Identities=26% Similarity=0.349 Sum_probs=97.2
Q ss_pred ccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccCCCc
Q psy8791 470 LGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDSSY 549 (706)
Q Consensus 470 ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 549 (706)
++|||+|.||+++|..+++..++.+|+++..++...|.
T Consensus 1 ivivG~g~aG~~aa~~l~~~~~~~~i~i~~~~~~~~~~------------------------------------------ 38 (415)
T COG0446 1 IVIVGGGAAGLSAATTLRRLLLAAEITLIGREPKYSYY------------------------------------------ 38 (415)
T ss_pred CEEECCcHHHHHHHHHHHhcCCCCCEEEEeCCCCCCCC------------------------------------------
Confidence 58999999999999999998888899888765543322
Q ss_pred eEEEeeecceecCCCcccccCcccccccccccccccccchhhhccCCcEE-EeceEEEEEcCCCeEEcCCCcEEeeCEEE
Q psy8791 550 TFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATW-VKDKIVSFDPENNRVRTQAGSEISYEYMI 628 (706)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~-~~~~v~~id~~~~~V~~~~g~~i~yd~lV 628 (706)
+++.+.++..+....+.+..........+++. ...+|+++|+++++|.+.+| ++.||+||
T Consensus 39 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g-~~~yd~Lv 99 (415)
T COG0446 39 ------------------RCPLSLYVGGGIASLEDLRYPPRFNRATGIDVRTGTEVTSIDPENKVVLLDDG-EIEYDYLV 99 (415)
T ss_pred ------------------CCccchHHhcccCCHHHhcccchhHHhhCCEEeeCCEEEEecCCCCEEEECCC-cccccEEE
Confidence 22222223322222222222222111246776 56789999999999999999 99999999
Q ss_pred EecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 629 VASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 629 iAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
+|||+++..++ +.. ......++...............++++|+ |+|+|..+++...+
T Consensus 100 latGa~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~gle~A~~~~~~G~~ 161 (415)
T COG0446 100 LATGARPRPPP--ISD--WEGVVTLRLREDAEALKGGAEPPKDVVVVGAGPIGLEAAEAAAKRGKK 161 (415)
T ss_pred EcCCCcccCCC--ccc--cCceEEECCHHHHHHHHHHHhccCeEEEECCcHHHHHHHHHHHHcCCe
Confidence 99999998776 222 22122222222111111111124678888 78888887776643
No 157
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional
Probab=98.98 E-value=4.3e-10 Score=131.41 Aligned_cols=150 Identities=19% Similarity=0.212 Sum_probs=90.5
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
..++|+|||||+||++||..|+++ +.+|+|+|+.+.. ||..... +|
T Consensus 430 ~~~~V~IIGaGpAGl~aA~~l~~~--G~~V~v~e~~~~~----------GG~l~~g---ip------------------- 475 (752)
T PRK12778 430 NGKKVAVIGSGPAGLSFAGDLAKR--GYDVTVFEALHEI----------GGVLKYG---IP------------------- 475 (752)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHC--CCeEEEEecCCCC----------CCeeeec---CC-------------------
Confidence 467999999999999999999998 8999999985432 2211100 00
Q ss_pred CCCceEEEeeecceecCCCcccccCccccccccccccccc-ccchhhhccCCcEEEeceEEEEEcCCCeEEcCCCcEEee
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDS-RRPMKSVLPSGATWVKDKIVSFDPENNRVRTQAGSEISY 624 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~y 624 (706)
. ..-..++ ......+.+.||++..+... .+.|++++.....|
T Consensus 476 ----------------------------~----~rlp~~~~~~~~~~l~~~gv~~~~~~~v-----~~~v~~~~l~~~~y 518 (752)
T PRK12778 476 ----------------------------E----FRLPKKIVDVEIENLKKLGVKFETDVIV-----GKTITIEELEEEGF 518 (752)
T ss_pred ----------------------------C----CCCCHHHHHHHHHHHHHCCCEEECCCEE-----CCcCCHHHHhhcCC
Confidence 0 0000011 11222333468998766543 23455555556779
Q ss_pred CEEEEecCc-ccCccCCCCchhhhcccccccccccCccc--------hhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 625 EYMIVASGI-QMYYDRVKGGTTSLEDRGKMRGVSDGFST--------VTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 625 d~lViAtGs-~~~~p~i~G~~~~~~~~~~~~~~~~~~~~--------~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
|+||||||+ .|+.+++||.+ ..++.....++..... ......+++|+|| |+|+|..+.++..
T Consensus 519 davvlAtGa~~~~~l~ipG~~--~~gV~~~~~~l~~~~~~~~~~~~~~~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga 594 (752)
T PRK12778 519 KGIFIASGAGLPNFMNIPGEN--SNGVMSSNEYLTRVNLMDAASPDSDTPIKFGKKVAVVGGGNTAMDSARTAKRLGA 594 (752)
T ss_pred CEEEEeCCCCCCCCCCCCCCC--CCCcEEHHHHHHHHhhcccccccccCcccCCCcEEEECCcHHHHHHHHHHHHcCC
Confidence 999999999 58888999965 2222222222111000 0112356899999 8888888877654
No 158
>PLN02852 ferredoxin-NADP+ reductase
Probab=98.97 E-value=1.1e-09 Score=119.22 Aligned_cols=39 Identities=31% Similarity=0.417 Sum_probs=33.5
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..++|+|||||+||++||..|++..++++|+|+|+.+..
T Consensus 25 ~~~~VaIVGaGPAGl~AA~~L~~~~~g~~Vtv~E~~p~p 63 (491)
T PLN02852 25 EPLHVCVVGSGPAGFYTADKLLKAHDGARVDIIERLPTP 63 (491)
T ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCeEEEEecCCCC
Confidence 456899999999999999999875458999999997643
No 159
>KOG1399|consensus
Probab=98.97 E-value=7.6e-09 Score=111.06 Aligned_cols=36 Identities=33% Similarity=0.480 Sum_probs=33.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..++|+|||||+|||++|+.|.+. |++++++||.+.
T Consensus 5 ~~~~vaIIGAG~sGL~~ar~l~~~--g~~v~vfEr~~~ 40 (448)
T KOG1399|consen 5 MSKDVAVIGAGPAGLAAARELLRE--GHEVVVFERTDD 40 (448)
T ss_pred CCCceEEECcchHHHHHHHHHHHC--CCCceEEEecCC
Confidence 467999999999999999999999 999999999876
No 160
>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional
Probab=98.97 E-value=6.9e-10 Score=122.49 Aligned_cols=148 Identities=16% Similarity=0.178 Sum_probs=86.6
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
..++|+|||||+||+++|..|+++ +.+|+|+|+++... |..... .|.
T Consensus 139 ~~~~VvIIGgGpaGl~aA~~l~~~--g~~V~lie~~~~~g----------G~l~~g---ip~------------------ 185 (457)
T PRK11749 139 TGKKVAVIGAGPAGLTAAHRLARK--GYDVTIFEARDKAG----------GLLRYG---IPE------------------ 185 (457)
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC--CCeEEEEccCCCCC----------cEeecc---CCC------------------
Confidence 456899999999999999999987 78999999866431 110000 000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccc-hhhhccCCcEEEeceEEEEEcCCCeEEcCCCcEEee
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRP-MKSVLPSGATWVKDKIVSFDPENNRVRTQAGSEISY 624 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~y 624 (706)
.....++... ...+...|+++..++.+. +.+.+.+. .+.|
T Consensus 186 ---------------------------------~~~~~~~~~~~~~~l~~~gv~~~~~~~v~-----~~v~~~~~-~~~~ 226 (457)
T PRK11749 186 ---------------------------------FRLPKDIVDREVERLLKLGVEIRTNTEVG-----RDITLDEL-RAGY 226 (457)
T ss_pred ---------------------------------ccCCHHHHHHHHHHHHHcCCEEEeCCEEC-----CccCHHHH-HhhC
Confidence 0000111111 122233688887665531 23334333 3789
Q ss_pred CEEEEecCcc-cCccCCCCchhhhcccccccccccCccc---hhhhccCccEEEE-----cHHHHHHHHHHH
Q psy8791 625 EYMIVASGIQ-MYYDRVKGGTTSLEDRGKMRGVSDGFST---VTWEQKHKQYQLV-----SPEIRAKAYDLT 687 (706)
Q Consensus 625 d~lViAtGs~-~~~p~i~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~k~vvVi-----G~E~A~~l~~~~ 687 (706)
|+||||||+. +..+++||.+ ..++.....++..... ......+++|+|| |+|+|..+.++.
T Consensus 227 d~vvlAtGa~~~~~~~i~G~~--~~gv~~~~~~l~~~~~~~~~~~~~~g~~VvViGgG~~g~e~A~~l~~~G 296 (457)
T PRK11749 227 DAVFIGTGAGLPRFLGIPGEN--LGGVYSAVDFLTRVNQAVADYDLPVGKRVVVIGGGNTAMDAARTAKRLG 296 (457)
T ss_pred CEEEEccCCCCCCCCCCCCcc--CCCcEEHHHHHHHHhhccccccCCCCCeEEEECCCHHHHHHHHHHHHcC
Confidence 9999999995 7777889865 2222111111111110 0111257899999 888888887664
No 161
>PRK09853 putative selenate reductase subunit YgfK; Provisional
Probab=98.96 E-value=1.6e-09 Score=125.65 Aligned_cols=146 Identities=18% Similarity=0.200 Sum_probs=85.1
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
..++|+|||||+||++||..|+++ +.+|+|+|+.+.. ||..... +|-
T Consensus 538 tgKkVaIIGgGPAGLsAA~~Lar~--G~~VtV~Ek~~~~----------GG~lr~~---IP~------------------ 584 (1019)
T PRK09853 538 SRKKVAVIGAGPAGLAAAYFLARA--GHPVTVFEREENA----------GGVVKNI---IPQ------------------ 584 (1019)
T ss_pred CCCcEEEECCCHHHHHHHHHHHHc--CCeEEEEeccccc----------Ccceeee---ccc------------------
Confidence 456899999999999999999998 8899999986653 2321100 000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhccCCcEEEeceEEEEEcCCCeEEcCCCcEEeeC
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDPENNRVRTQAGSEISYE 625 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~yd 625 (706)
++ ...+.+......+...||++..+....+ .+++.+...||
T Consensus 585 ---------------------~R-----------lp~evL~~die~l~~~GVe~~~gt~Vdi-------~le~L~~~gYD 625 (1019)
T PRK09853 585 ---------------------FR-----------IPAELIQHDIEFVKAHGVKFEFGCSPDL-------TVEQLKNEGYD 625 (1019)
T ss_pred ---------------------cc-----------ccHHHHHHHHHHHHHcCCEEEeCceeEE-------EhhhheeccCC
Confidence 00 0001111223333446899866654322 23334456799
Q ss_pred EEEEecCccc-CccCCCCchhhhcccccccccccCc-cchhhhccCccEEEE-----cHHHHHHHHHH
Q psy8791 626 YMIVASGIQM-YYDRVKGGTTSLEDRGKMRGVSDGF-STVTWEQKHKQYQLV-----SPEIRAKAYDL 686 (706)
Q Consensus 626 ~lViAtGs~~-~~p~i~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~k~vvVi-----G~E~A~~l~~~ 686 (706)
+||||||+.+ ..+++||.++. +.....++..+ ........+++|+|| |+|+|..+.++
T Consensus 626 aVILATGA~~~~~l~IpG~~~g---V~saldfL~~~k~~~~~~~~GKrVVVIGGGnVAmD~Ar~a~Rl 690 (1019)
T PRK09853 626 YVVVAIGADKNGGLKLEGGNQN---VIKALPFLEEYKNKGTALKLGKHVVVVGGGNTAMDAARAALRV 690 (1019)
T ss_pred EEEECcCCCCCCCCCCCCccCC---ceehHHHHHHHhhhcccccCCCEEEEECCChHHHHHHHHHHhc
Confidence 9999999974 45578885421 11001111111 111122357899999 88888776655
No 162
>PF03486 HI0933_like: HI0933-like protein; InterPro: IPR004792 This is a family of conserved hypothetical proteins that may include proteins with a dinucleotide-binding motif (Rossman fold), including oxidoreductases and dehydrogenases.; PDB: 2I0Z_A 3V76_A 2GQF_A.
Probab=98.94 E-value=6.3e-09 Score=111.38 Aligned_cols=79 Identities=11% Similarity=0.120 Sum_probs=49.8
Q ss_pred HHHHHcCCCCCcEEEEEeCCCcCCC----chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEE
Q psy8791 240 EYLRKHKKRDAAKLTYCTGMGVLFP----SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIM 315 (706)
Q Consensus 240 ~~l~~~g~~~~~~v~l~~~~~~~~~----~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~v 315 (706)
+++.+.|.. +..+...+++| ..++.+.+++.+++.||+++++++|.+++.+++.+..+.++++.++.+|.|
T Consensus 84 ~ff~~~Gv~-----~~~~~~gr~fP~s~~a~~Vv~~L~~~l~~~gv~i~~~~~V~~i~~~~~~~f~v~~~~~~~~~a~~v 158 (409)
T PF03486_consen 84 AFFEELGVP-----TKIEEDGRVFPKSDKASSVVDALLEELKRLGVEIHFNTRVKSIEKKEDGVFGVKTKNGGEYEADAV 158 (409)
T ss_dssp HHHHHTT-------EEE-STTEEEETT--HHHHHHHHHHHHHHHT-EEE-S--EEEEEEETTEEEEEEETTTEEEEESEE
T ss_pred HHHHhcCCe-----EEEcCCCEECCCCCcHHHHHHHHHHHHHHcCCEEEeCCEeeeeeecCCceeEeeccCcccccCCEE
Confidence 456666632 33445556665 356778889999999999999999999987655533333457789999999
Q ss_pred EECCCCCc
Q psy8791 316 HVTPPMGP 323 (706)
Q Consensus 316 I~a~G~~~ 323 (706)
|+|+|-.+
T Consensus 159 ILAtGG~S 166 (409)
T PF03486_consen 159 ILATGGKS 166 (409)
T ss_dssp EE----SS
T ss_pred EEecCCCC
Confidence 99999765
No 163
>PF13434 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requiring); PDB: 3S61_B 3S5W_B.
Probab=98.87 E-value=1.3e-08 Score=106.81 Aligned_cols=43 Identities=19% Similarity=0.199 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCccc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMF 73 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~ 73 (706)
.+|+|+||.|+++|+.|..|.+.. ..++..+|+.+.+.|.|.+
T Consensus 2 ~~D~igIG~GP~nLslA~~l~~~~-~~~~~f~e~~~~f~Wh~gm 44 (341)
T PF13434_consen 2 IYDLIGIGFGPFNLSLAALLEEHG-DLKALFLERRPSFSWHPGM 44 (341)
T ss_dssp EESEEEE--SHHHHHHHHHHHHHH----EEEEES-SS--TTGGG
T ss_pred ceeEEEEeeCHHHHHHHHHhhhcC-CCCEEEEecCCCCCcCCcc
Confidence 368999999999999999999883 5899999999998888654
No 164
>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional
Probab=98.86 E-value=2.4e-09 Score=127.34 Aligned_cols=149 Identities=14% Similarity=0.151 Sum_probs=87.4
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
+.++|+|||||+||++||..|+++ +.+|+|+|+.+.. ||..... +|
T Consensus 429 ~~~kVaIIG~GPAGLsaA~~La~~--G~~VtV~E~~~~~----------GG~l~~g---ip------------------- 474 (1006)
T PRK12775 429 KLGKVAICGSGPAGLAAAADLVKY--GVDVTVYEALHVV----------GGVLQYG---IP------------------- 474 (1006)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--CCcEEEEecCCCC----------cceeecc---CC-------------------
Confidence 457899999999999999999998 8999999986543 2211100 00
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccc-cchhhhccCCcEEEeceEEEEEcCCCeEEcCCC-cEEe
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSR-RPMKSVLPSGATWVKDKIVSFDPENNRVRTQAG-SEIS 623 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g-~~i~ 623 (706)
.+ ....++. .....+.+.||++..+.+... .+++.+- ....
T Consensus 475 ----------------------------~~----rl~~e~~~~~~~~l~~~Gv~~~~~~~vg~-----~~~~~~l~~~~~ 517 (1006)
T PRK12775 475 ----------------------------SF----RLPRDIIDREVQRLVDIGVKIETNKVIGK-----TFTVPQLMNDKG 517 (1006)
T ss_pred ----------------------------cc----CCCHHHHHHHHHHHHHCCCEEEeCCccCC-----ccCHHHHhhccC
Confidence 00 0001111 223333446899876655422 2222221 1346
Q ss_pred eCEEEEecCc-ccCccCCCCchhhhcccccccccccCccc---------hhhhccCccEEEE-----cHHHHHHHHHHH
Q psy8791 624 YEYMIVASGI-QMYYDRVKGGTTSLEDRGKMRGVSDGFST---------VTWEQKHKQYQLV-----SPEIRAKAYDLT 687 (706)
Q Consensus 624 yd~lViAtGs-~~~~p~i~G~~~~~~~~~~~~~~~~~~~~---------~~~~~~~k~vvVi-----G~E~A~~l~~~~ 687 (706)
||+||||||+ .|+.++|||.+ +.++.....++..... ......+|+|+|| |+|+|..+.++.
T Consensus 518 yDaViIATGa~~pr~l~IpG~~--l~gV~~a~~fL~~~~~~~~~~~~~~~~~~~~Gk~VvVIGgG~tA~D~A~~a~rlG 594 (1006)
T PRK12775 518 FDAVFLGVGAGAPTFLGIPGEF--AGQVYSANEFLTRVNLMGGDKFPFLDTPISLGKSVVVIGAGNTAMDCLRVAKRLG 594 (1006)
T ss_pred CCEEEEecCCCCCCCCCCCCcC--CCCcEEHHHHHHHHHhcCccccccccCCccCCCEEEEECCcHHHHHHHHHHHHcC
Confidence 9999999999 48889999964 3333222222211100 0112357899999 777776666554
No 165
>TIGR01372 soxA sarcosine oxidase, alpha subunit family, heterotetrameric form. This model describes the alpha subunit of a family of known and putative heterotetrameric sarcosine oxidases. Five operons of such oxidases are found in Mesorhizobium loti and three in Agrobacterium tumefaciens, a high enough copy number to suggest that not all members are share the same function. The model is designated as subfamily rather than equivalog for this reason.Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms
Probab=98.84 E-value=7.6e-09 Score=123.87 Aligned_cols=35 Identities=26% Similarity=0.340 Sum_probs=31.9
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
.+||+|||||+||++||..+++. +.+|+|||+++.
T Consensus 163 ~~dVvIIGaGPAGLaAA~~aar~--G~~V~liD~~~~ 197 (985)
T TIGR01372 163 HCDVLVVGAGPAGLAAALAAARA--GARVILVDEQPE 197 (985)
T ss_pred cCCEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCC
Confidence 57999999999999999999987 899999998664
No 166
>PRK04176 ribulose-1,5-biphosphate synthetase; Provisional
Probab=98.83 E-value=2.1e-07 Score=93.77 Aligned_cols=121 Identities=13% Similarity=0.081 Sum_probs=74.8
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCC-EEEEEeC-----------CCceEEeecEEEECCCCCch--hhhhc-C
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANK-EAVFKSE-----------DKTERLPYAIMHVTPPMGPV--PELAT-S 330 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~-~v~~~~~-----------~~g~~i~~D~vI~a~G~~~~--~~~~~-~ 330 (706)
..+...+.+.+++.|++++.++.+.++..+++ .+..+.. .+..++.++.||.|+|.... ..+.+ .
T Consensus 104 ~~l~~~L~~~A~~~Gv~I~~~t~V~dl~~~~~g~V~Gvv~~~~~v~~~g~~~~~~~i~Ak~VI~ATG~~a~v~~~l~~~~ 183 (257)
T PRK04176 104 VEAAAKLAAAAIDAGAKIFNGVSVEDVILREDPRVAGVVINWTPVEMAGLHVDPLTIEAKAVVDATGHDAEVVSVLARKG 183 (257)
T ss_pred HHHHHHHHHHHHHcCCEEEcCceeceeeEeCCCcEEEEEEccccccccCCCCCcEEEEcCEEEEEeCCCcHHHHHHHHHc
Confidence 56677777888889999999999998864332 3322111 13357999999999998766 22222 1
Q ss_pred --------CC----CCCCCceeeCccccccCCCCCEEEccccCCC--CCC---chHHHHHHhHHHHHHHHHHHHcC
Q psy8791 331 --------RL----VDQSGYVNVDKATLQHVKYSNVFAIGDCSNL--PTS---KTAAAVAGQCKVVYDNLSAVMKN 389 (706)
Q Consensus 331 --------~l----~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~--~~~---~~~~~a~~qg~~~a~ni~~~l~g 389 (706)
|. .+......|+. |-++ +|++|++|=+++. ..| +.-..-...|+.+|+-|...+..
T Consensus 184 ~~~~~~~~g~~~~~~~~~e~~v~~~-t~~~--~~g~~~~gm~~~~~~~~~rmg~~fg~m~~sg~~~a~~~~~~~~~ 256 (257)
T PRK04176 184 PELGIEVPGEKSMWAERGEKLVVEN-TGEV--YPGLYVAGMAANAVHGLPRMGPIFGGMLLSGKKVAELILEKLKK 256 (257)
T ss_pred CCcccccCCccccccCchHHHHHhc-CCeE--cCCEEEeehhhhhhcCCCccCchhHhHHHhHHHHHHHHHHHhhc
Confidence 11 11122223333 3332 8999999966543 122 22223456889999999888754
No 167
>TIGR03315 Se_ygfK putative selenate reductase, YgfK subunit. Members of this protein family are YgfK, predicted to be one subunit of a three-subunit, molybdopterin-containing selenate reductase. This enzyme is found, typically, in genomic regions associated with xanthine dehydrogenase homologs predicted to belong to the selenium-dependent molybdenum hydroxylases (SDMH). Therefore, the selenate reductase is suggested to play a role in furnishing selenide for SelD, the selenophosphate synthase.
Probab=98.83 E-value=1.1e-08 Score=119.62 Aligned_cols=36 Identities=22% Similarity=0.374 Sum_probs=32.4
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
..++|+|||||+||++||..|++. +.+|+|+|+++.
T Consensus 536 ~~kkVaIIGGGPAGLSAA~~LAr~--G~~VTV~Ek~~~ 571 (1012)
T TIGR03315 536 SAHKVAVIGAGPAGLSAGYFLARA--GHPVTVFEKKEK 571 (1012)
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCeEEEEecccc
Confidence 357899999999999999999998 899999998764
No 168
>COG3486 IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.83 E-value=3.7e-07 Score=93.49 Aligned_cols=109 Identities=9% Similarity=0.064 Sum_probs=72.2
Q ss_pred hCCceEEcCCceEEEeCCCCE-E--EEEe--CCCceEEeecEEEECCCCCch--hhhhcC--CC-CCCCCceeeCccccc
Q psy8791 278 GRGVDVHKGKALVEIDLANKE-A--VFKS--EDKTERLPYAIMHVTPPMGPV--PELATS--RL-VDQSGYVNVDKATLQ 347 (706)
Q Consensus 278 ~~gV~v~~~~~v~~i~~~~~~-v--~~~~--~~~g~~i~~D~vI~a~G~~~~--~~~~~~--~l-~~~~G~i~vd~~~l~ 347 (706)
+.+|.++.+++|..++..++. + .... +++.++++.|.||+|||+... +++... .| .+++|...|+. .+.
T Consensus 290 ~~~v~l~~~~ev~~~~~~G~g~~~l~~~~~~~~~~~t~~~D~vIlATGY~~~~P~fL~~l~d~l~~d~~g~l~I~~-dY~ 368 (436)
T COG3486 290 KPDVRLLSLSEVQSVEPAGDGRYRLTLRHHETGELETVETDAVILATGYRRAVPSFLEGLADRLQWDDDGRLVIGR-DYR 368 (436)
T ss_pred CCCeeeccccceeeeecCCCceEEEEEeeccCCCceEEEeeEEEEecccccCCchhhhhHHHhhcccccCCeEecC-cee
Confidence 356889999999999987643 2 2222 224568999999999999854 466554 23 68889999998 455
Q ss_pred cCCC----CCEEEccccCCC---CCCchHHHHHHhHHHHHHHHHHHHcCCCC
Q psy8791 348 HVKY----SNVFAIGDCSNL---PTSKTAAAVAGQCKVVYDNLSAVMKNRAL 392 (706)
Q Consensus 348 ~~~~----~~Ifa~GD~~~~---~~~~~~~~a~~qg~~~a~ni~~~l~g~~~ 392 (706)
+... ..||+-|=+... ..|.+.-.|.+.+ .|++.+.|...
T Consensus 369 v~~~~~~~~~ifvqn~e~htHGig~pdLsl~a~Raa-----~I~~~L~g~~~ 415 (436)
T COG3486 369 VLWDGPGKGRIFVQNAELHTHGIGAPDLSLGAWRAA-----VILNSLLGREK 415 (436)
T ss_pred eecCCCCcceEEEecccccccccCCccchHHHHHHH-----HHHHHHhCcCC
Confidence 4332 369999966543 2344554555544 55666667654
No 169
>COG3634 AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones]
Probab=98.83 E-value=5.2e-09 Score=103.56 Aligned_cols=99 Identities=13% Similarity=0.111 Sum_probs=73.3
Q ss_pred cchhhhcc-CCcEEEec-eEEEEEcC-----CCeEEcCCCcEEeeCEEEEecCcccCccCCCCchhhhcccccccccccC
Q psy8791 587 RPMKSVLP-SGATWVKD-KIVSFDPE-----NNRVRTQAGSEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDG 659 (706)
Q Consensus 587 ~~~~~~~~-~gv~~~~~-~v~~id~~-----~~~V~~~~g~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~ 659 (706)
..+++..+ ..|++++. +++++.+. -..|++.+|-.+..+.+|||||++.+.-.+||.+++......++.+++.
T Consensus 270 ~ale~Hv~~Y~vDimn~qra~~l~~a~~~~~l~ev~l~nGavLkaktvIlstGArWRn~nvPGE~e~rnKGVayCPHCDG 349 (520)
T COG3634 270 AALEAHVKQYDVDVMNLQRASKLEPAAVEGGLIEVELANGAVLKARTVILATGARWRNMNVPGEDEYRNKGVAYCPHCDG 349 (520)
T ss_pred HHHHHHHhhcCchhhhhhhhhcceecCCCCccEEEEecCCceeccceEEEecCcchhcCCCCchHHHhhCCeeeCCCCCC
Confidence 33444443 46777543 56777663 2368999999999999999999999999999998876655555666543
Q ss_pred ccchhhhccCccEEEE-----cHHHHHHHHHHHhhh
Q psy8791 660 FSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKRK 690 (706)
Q Consensus 660 ~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~~ 690 (706)
- ..++|+|+|| |+|.|-.|+.+...+
T Consensus 350 P-----LF~gK~VAVIGGGNSGvEAAIDLAGiv~hV 380 (520)
T COG3634 350 P-----LFKGKRVAVIGGGNSGVEAAIDLAGIVEHV 380 (520)
T ss_pred c-----ccCCceEEEECCCcchHHHHHhHHhhhhee
Confidence 2 3478999999 999998888776543
No 170
>PRK12810 gltD glutamate synthase subunit beta; Reviewed
Probab=98.82 E-value=5.3e-09 Score=115.67 Aligned_cols=36 Identities=28% Similarity=0.417 Sum_probs=32.1
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
..++|+|||+|+||+++|..|++. +.+|+|||+.+.
T Consensus 142 ~~~~VvIIGaGpAGl~aA~~l~~~--G~~V~vie~~~~ 177 (471)
T PRK12810 142 TGKKVAVVGSGPAGLAAADQLARA--GHKVTVFERADR 177 (471)
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC--CCcEEEEecCCC
Confidence 346899999999999999999987 789999998664
No 171
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A ....
Probab=98.82 E-value=1.2e-08 Score=99.70 Aligned_cols=108 Identities=19% Similarity=0.261 Sum_probs=57.9
Q ss_pred EEECCCHHHHHHHHHHHhhcCCCe-EEEEcCCCCcc------------cCccccc--c--c----------------Ccc
Q psy8791 34 LVVGGGAAGCSMAAKFTSKLGKGQ-VSIVEPTDDHY------------YQPMFTL--I--G----------------GGM 80 (706)
Q Consensus 34 vIIGgG~aGl~aA~~L~~~~~~~~-Vtlie~~~~~~------------~~p~~~~--~--~----------------~~~ 80 (706)
+|||||++||++|.+|.++ +.+ |+|||+++... +.|.... . . ...
T Consensus 1 ~IIGaG~aGl~~a~~l~~~--g~~~v~v~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (203)
T PF13738_consen 1 VIIGAGPAGLAAAAHLLER--GIDPVVVLERNDRPGGVWRRYYSYTRLHSPSFFSSDFGLPDFESFSFDDSPEWRWPHDF 78 (203)
T ss_dssp EEE--SHHHHHHHHHHHHT--T---EEEEESSSSSTTHHHCH-TTTT-BSSSCCTGGSS--CCCHSCHHHHHHHHHSBSS
T ss_pred CEECcCHHHHHHHHHHHhC--CCCcEEEEeCCCCCCCeeEEeCCCCccccCccccccccCCcccccccccCCCCCCCccc
Confidence 7999999999999999999 888 99999986511 1111100 0 0 000
Q ss_pred ccCcccccccccccC-CCcEEEE-ceeEEEEcCCC--EEEeCCCeEEEecEEEEcccc--ccccCCCCC
Q psy8791 81 KKLSDSRRPMKSVLP-SGATWVK-DKIVSFDPENN--RVRTQAGSEISYEYMIVASGI--QMYYDRVKG 143 (706)
Q Consensus 81 ~~~~~~~~~~~~~~~-~~v~~i~-~~v~~id~~~~--~v~~~~g~~~~yd~lviAtG~--~~~~~~~~g 143 (706)
...+.+...+.++.+ .++++.. .+|+++..++. .|++++++++.+|+||+|||. .|+.|.+||
T Consensus 79 ~~~~~v~~yl~~~~~~~~l~i~~~~~V~~v~~~~~~w~v~~~~~~~~~a~~VVlAtG~~~~p~~p~~~g 147 (203)
T PF13738_consen 79 PSGEEVLDYLQEYAERFGLEIRFNTRVESVRRDGDGWTVTTRDGRTIRADRVVLATGHYSHPRIPDIPG 147 (203)
T ss_dssp EBHHHHHHHHHHHHHHTTGGEETS--EEEEEEETTTEEEEETTS-EEEEEEEEE---SSCSB---S-TT
T ss_pred CCHHHHHHHHHHHHhhcCcccccCCEEEEEEEeccEEEEEEEecceeeeeeEEEeeeccCCCCcccccc
Confidence 001111122222222 4555433 67888877654 688888888999999999995 666666666
No 172
>PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated
Probab=98.81 E-value=4.8e-09 Score=120.12 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=31.2
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPT 501 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~ 501 (706)
..++|+|||+|+||++||..|+++ +++|+++|+.
T Consensus 382 tgKKVaVVGaGPAGLsAA~~La~~--Gh~Vtv~E~~ 415 (1028)
T PRK06567 382 TNYNILVTGLGPAGFSLSYYLLRS--GHNVTAIDGL 415 (1028)
T ss_pred CCCeEEEECcCHHHHHHHHHHHhC--CCeEEEEccc
Confidence 457899999999999999999987 8999999974
No 173
>PF03486 HI0933_like: HI0933-like protein; InterPro: IPR004792 This is a family of conserved hypothetical proteins that may include proteins with a dinucleotide-binding motif (Rossman fold), including oxidoreductases and dehydrogenases.; PDB: 2I0Z_A 3V76_A 2GQF_A.
Probab=98.81 E-value=1.5e-09 Score=116.26 Aligned_cols=150 Identities=18% Similarity=0.306 Sum_probs=75.4
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCC---Cccc-------
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPS---GATW------- 537 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~---~~~~------- 537 (706)
|||+|||||+||+.||..+.+. +.+|+|+|+++...-... ..++|.|+..+.......+... ...+
T Consensus 1 ydviIIGgGaAGl~aA~~aa~~--g~~V~vlE~~~~~gkKil--~tG~GrCN~tn~~~~~~~~~~~~~~~~~f~~~~l~~ 76 (409)
T PF03486_consen 1 YDVIIIGGGAAGLMAAITAAEK--GARVLVLERNKRVGKKIL--ITGNGRCNLTNLNIDPSEFLSGYGRNPKFLKSALKR 76 (409)
T ss_dssp -SEEEE--SHHHHHHHHHHHHT--T--EEEE-SSSSS-HHHH--HCGGGT-EEEETTSSGGGEECS-TBTTTCTHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCccccccee--ecCCCCccccccccchhhHhhhcccchHHHHHHHhc
Confidence 6899999999999999999887 899999999887542221 2366888887755555554443 1122
Q ss_pred -ccccccccCCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhc-cCCcEE-EeceEEEEEcCCCe-
Q psy8791 538 -VKDKIVSFDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PSGATW-VKDKIVSFDPENNR- 613 (706)
Q Consensus 538 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~~-~~~~v~~id~~~~~- 613 (706)
...+...++.+.++. ...++... .++ .. ....++...+...+ +.||++ ++.+|.+|..++..
T Consensus 77 f~~~d~~~ff~~~Gv~-----~~~~~~gr-~fP-------~s-~~a~~Vv~~L~~~l~~~gv~i~~~~~V~~i~~~~~~~ 142 (409)
T PF03486_consen 77 FSPEDLIAFFEELGVP-----TKIEEDGR-VFP-------KS-DKASSVVDALLEELKRLGVEIHFNTRVKSIEKKEDGV 142 (409)
T ss_dssp S-HHHHHHHHHHTT-------EEE-STTE-EEE-------TT---HHHHHHHHHHHHHHHT-EEE-S--EEEEEEETTEE
T ss_pred CCHHHHHHHHHhcCCe-----EEEcCCCE-ECC-------CC-CcHHHHHHHHHHHHHHcCCEEEeCCEeeeeeecCCce
Confidence 222333333333321 01111111 000 00 01112222222222 269998 57789999775544
Q ss_pred --EEcCCCcEEeeCEEEEecCccc
Q psy8791 614 --VRTQAGSEISYEYMIVASGIQM 635 (706)
Q Consensus 614 --V~~~~g~~i~yd~lViAtGs~~ 635 (706)
|.+++++++.+|+||||||+.+
T Consensus 143 f~v~~~~~~~~~a~~vILAtGG~S 166 (409)
T PF03486_consen 143 FGVKTKNGGEYEADAVILATGGKS 166 (409)
T ss_dssp EEEEETTTEEEEESEEEE----SS
T ss_pred eEeeccCcccccCCEEEEecCCCC
Confidence 6666778999999999999765
No 174
>COG0579 Predicted dehydrogenase [General function prediction only]
Probab=98.79 E-value=5.3e-08 Score=103.20 Aligned_cols=72 Identities=8% Similarity=0.081 Sum_probs=58.6
Q ss_pred cCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceE-EeecEEEECCCCCchhhhhcCCC
Q psy8791 261 VLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTER-LPYAIMHVTPPMGPVPELATSRL 332 (706)
Q Consensus 261 ~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~-i~~D~vI~a~G~~~~~~~~~~~l 332 (706)
.+..+..+...+.+.+.++|++++++++|+.|+.+++.+....+.+|++ ++|+.||.|.|.-+...+...|+
T Consensus 148 giV~~~~~t~~l~e~a~~~g~~i~ln~eV~~i~~~~dg~~~~~~~~g~~~~~ak~Vin~AGl~Ad~la~~~g~ 220 (429)
T COG0579 148 GIVDPGELTRALAEEAQANGVELRLNTEVTGIEKQSDGVFVLNTSNGEETLEAKFVINAAGLYADPLAQMAGI 220 (429)
T ss_pred ceEcHHHHHHHHHHHHHHcCCEEEecCeeeEEEEeCCceEEEEecCCcEEEEeeEEEECCchhHHHHHHHhCC
Confidence 3333566788888888899999999999999988766455555667766 99999999999999988888776
No 175
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=98.79 E-value=7.3e-09 Score=118.72 Aligned_cols=36 Identities=19% Similarity=0.377 Sum_probs=32.2
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
..++|+|||||+||+++|..|++. +.+|+|+|+++.
T Consensus 192 ~~k~VaIIGaGpAGl~aA~~La~~--G~~Vtv~e~~~~ 227 (652)
T PRK12814 192 SGKKVAIIGAGPAGLTAAYYLLRK--GHDVTIFDANEQ 227 (652)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCC
Confidence 346899999999999999999988 889999998665
No 176
>PTZ00188 adrenodoxin reductase; Provisional
Probab=98.79 E-value=3.9e-07 Score=97.96 Aligned_cols=102 Identities=11% Similarity=0.171 Sum_probs=60.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCccccccccccc-CCCcEEEEceeE
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PSGATWVKDKIV 106 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~i~~~v~ 106 (706)
...++|+|||||+||+.||.+|.++. +++|+|+|+.+....... ..++......+.+...+...+ ..+++|.. .+
T Consensus 37 ~~~krVAIVGaGPAGlyaA~~Ll~~~-g~~VtlfEk~p~pgGLvR-~GVaPdh~~~k~v~~~f~~~~~~~~v~f~g-nv- 112 (506)
T PTZ00188 37 AKPFKVGIIGAGPSALYCCKHLLKHE-RVKVDIFEKLPNPYGLIR-YGVAPDHIHVKNTYKTFDPVFLSPNYRFFG-NV- 112 (506)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhc-CCeEEEEecCCCCccEEE-EeCCCCCccHHHHHHHHHHHHhhCCeEEEe-ee-
Confidence 34578999999999999999876442 899999999996432111 112222222222333333322 35666652 11
Q ss_pred EEEcCCCEEEeCCCeEEEecEEEEccccccc
Q psy8791 107 SFDPENNRVRTQAGSEISYEYMIVASGIQMY 137 (706)
Q Consensus 107 ~id~~~~~v~~~~g~~~~yd~lviAtG~~~~ 137 (706)
... ..++.++- .-.||.||+|+|+.+.
T Consensus 113 --~VG-~Dvt~eeL-~~~YDAVIlAtGA~~l 139 (506)
T PTZ00188 113 --HVG-VDLKMEEL-RNHYNCVIFCCGASEV 139 (506)
T ss_pred --Eec-CccCHHHH-HhcCCEEEEEcCCCCC
Confidence 111 12222222 2379999999998854
No 177
>KOG1800|consensus
Probab=98.74 E-value=9e-08 Score=96.40 Aligned_cols=109 Identities=14% Similarity=0.186 Sum_probs=64.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCcccccccccccC-CCcEEEEceeE
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIV 106 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~i~~~v~ 106 (706)
..+++|.|||+|+||+.+|.+|.++.+++.|+++|+.+.. |.--...+.........+.-.+..+.. ....|... |
T Consensus 18 s~~p~vcIVGsGPAGfYtA~~LLk~~~~~~Vdi~Ek~PvP-FGLvRyGVAPDHpEvKnvintFt~~aE~~rfsf~gN-v- 94 (468)
T KOG1800|consen 18 SSTPRVCIVGSGPAGFYTAQHLLKRHPNAHVDIFEKLPVP-FGLVRYGVAPDHPEVKNVINTFTKTAEHERFSFFGN-V- 94 (468)
T ss_pred cCCceEEEECCCchHHHHHHHHHhcCCCCeeEeeecCCcc-cceeeeccCCCCcchhhHHHHHHHHhhccceEEEec-c-
Confidence 3456999999999999999999997678999999999841 110011122222222222222333333 23344321 1
Q ss_pred EEEcCCCEEEeCCCeEEEecEEEEccccc-cccCCCCC
Q psy8791 107 SFDPENNRVRTQAGSEISYEYMIVASGIQ-MYYDRVKG 143 (706)
Q Consensus 107 ~id~~~~~v~~~~g~~~~yd~lviAtG~~-~~~~~~~g 143 (706)
.. ...+.+.. -+-.||.+|+|.|+. .+...|||
T Consensus 95 --~v-G~dvsl~e-L~~~ydavvLaYGa~~dR~L~IPG 128 (468)
T KOG1800|consen 95 --KV-GRDVSLKE-LTDNYDAVVLAYGADGDRRLDIPG 128 (468)
T ss_pred --ee-cccccHHH-HhhcccEEEEEecCCCCcccCCCC
Confidence 00 11122221 133699999999985 56788999
No 178
>KOG0404|consensus
Probab=98.70 E-value=4.3e-08 Score=91.34 Aligned_cols=182 Identities=14% Similarity=0.120 Sum_probs=102.9
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
.+.+|+|||+|+|+..+|+.+.+. ..+-+++|-..-.. ...+|..+...+
T Consensus 7 h~e~v~IiGSGPAa~tAAiYaara--elkPllfEG~~~~~-----i~pGGQLtTTT~----------------------- 56 (322)
T KOG0404|consen 7 HNENVVIIGSGPAAHTAAIYAARA--ELKPLLFEGMMANG-----IAPGGQLTTTTD----------------------- 56 (322)
T ss_pred eeeeEEEEccCchHHHHHHHHhhc--ccCceEEeeeeccC-----cCCCceeeeeec-----------------------
Confidence 345899999999999999999987 77888987521110 000111111000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhh-ccCCcEEEeceEEEEEcCCCeEEc-CCCcEEe
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSV-LPSGATWVKDKIVSFDPENNRVRT-QAGSEIS 623 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gv~~~~~~v~~id~~~~~V~~-~~g~~i~ 623 (706)
+ ..-|.+|.-..+. ++...++.. .+.|.+++..+|.++|...+-.++ +|.+.+.
T Consensus 57 --------------v------eNfPGFPdgi~G~----~l~d~mrkqs~r~Gt~i~tEtVskv~~sskpF~l~td~~~v~ 112 (322)
T KOG0404|consen 57 --------------V------ENFPGFPDGITGP----ELMDKMRKQSERFGTEIITETVSKVDLSSKPFKLWTDARPVT 112 (322)
T ss_pred --------------c------ccCCCCCcccccH----HHHHHHHHHHHhhcceeeeeehhhccccCCCeEEEecCCcee
Confidence 0 1113333222221 122222222 225889999999999998874322 3566899
Q ss_pred eCEEEEecCcccCccCCCCchh--hhcccccccccccCccchhhhccCccEEEE-cHHHHHHHHHHHhhhhhhhcccccc
Q psy8791 624 YEYMIVASGIQMYYDRVKGGTT--SLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-SPEIRAKAYDLTKRKMKKEAQWIRF 700 (706)
Q Consensus 624 yd~lViAtGs~~~~p~i~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-G~E~A~~l~~~~~~~~~~~~~~~~~ 700 (706)
+|.+|+|||+......+||..+ +.....+.+..++... .....|-.+|| |-+.|.+=+.++. ++.++..-|++
T Consensus 113 ~~avI~atGAsAkRl~~pg~ge~~fWqrGiSaCAVCDGaa---pifrnk~laVIGGGDsA~EEA~fLt-kyaskVyii~R 188 (322)
T KOG0404|consen 113 ADAVILATGASAKRLHLPGEGEGEFWQRGISACAVCDGAA---PIFRNKPLAVIGGGDSAMEEALFLT-KYASKVYIIHR 188 (322)
T ss_pred eeeEEEecccceeeeecCCCCcchHHhcccchhhcccCcc---hhhcCCeeEEEcCcHHHHHHHHHHH-hhccEEEEEEE
Confidence 9999999999999888998732 2222122222333221 11355668888 4444443333332 34455556666
Q ss_pred ccccc
Q psy8791 701 QEKLK 705 (706)
Q Consensus 701 ~~~~~ 705 (706)
++.||
T Consensus 189 rd~fR 193 (322)
T KOG0404|consen 189 RDHFR 193 (322)
T ss_pred hhhhh
Confidence 66554
No 179
>PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1.1.99.5 from EC), Sarcosine oxidase beta subunit (1.5.3.1 from EC), D-alanine oxidase (1.4.99.1 from EC), D-aspartate oxidase (1.4.3.1 from EC). D-amino acid oxidase (1.4.3.3 from EC) (DAMOX or DAO) is an FAD flavoenzyme that catalyzes the oxidation of neutral and basic D-amino acids into their corresponding keto acids. DAOs have been characterised and sequenced in fungi and vertebrates where they are known to be located in the peroxisomes. D-aspartate oxidase (1.4.3.1 from EC) (DASOX) [] is an enzyme, structurally related to DAO, which catalyzes the same reaction but is active only toward dicarboxylic D-amino acids. In DAO, a conserved histidine has been shown [] to be important for the enzyme's catalytic activity.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2RGO_A 3NYE_A 3NYF_A 3NYC_A 3SM8_A 3SGL_A 3PVC_A 3DME_A 2GAH_B 3NLC_A ....
Probab=98.70 E-value=1.6e-07 Score=100.37 Aligned_cols=82 Identities=11% Similarity=0.031 Sum_probs=62.1
Q ss_pred CcEEEEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhc
Q psy8791 250 AAKLTYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELAT 329 (706)
Q Consensus 250 ~~~v~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~ 329 (706)
...-.+..+....+.+..+.+.+.+.+++.|++++.+++|++++.+++.++.+.+++|+ +.+|.||+|+|...+.++..
T Consensus 131 ~~~~~~~~~~~g~i~~~~l~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~gv~~~~g~-i~ad~vV~a~G~~s~~l~~~ 209 (358)
T PF01266_consen 131 RIEGGVFFPEGGVIDPRRLIQALAAEAQRAGVEIRTGTEVTSIDVDGGRVTGVRTSDGE-IRADRVVLAAGAWSPQLLPL 209 (358)
T ss_dssp TTEEEEEETTEEEEEHHHHHHHHHHHHHHTT-EEEESEEEEEEEEETTEEEEEEETTEE-EEECEEEE--GGGHHHHHHT
T ss_pred chhhhhcccccccccccchhhhhHHHHHHhhhhccccccccchhhcccccccccccccc-cccceeEecccccceeeeec
Confidence 33455555555545568899999999999999999999999999888777745666777 99999999999988876666
Q ss_pred CCC
Q psy8791 330 SRL 332 (706)
Q Consensus 330 ~~l 332 (706)
.+.
T Consensus 210 ~~~ 212 (358)
T PF01266_consen 210 LGL 212 (358)
T ss_dssp TTT
T ss_pred ccc
Confidence 543
No 180
>PTZ00383 malate:quinone oxidoreductase; Provisional
Probab=98.70 E-value=1.3e-07 Score=104.10 Aligned_cols=70 Identities=7% Similarity=0.001 Sum_probs=54.0
Q ss_pred CCCchhHHHHHHHHHHh----CC--ceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhcCCC
Q psy8791 262 LFPSPFYAEKIHDILIG----RG--VDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELATSRL 332 (706)
Q Consensus 262 ~~~~~~~~~~~~~~l~~----~g--V~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~~l 332 (706)
...+..+...+.+.+++ .| ++++++++|.+|+.+++....+.+++| ++.+|.||+|+|.+....+...|+
T Consensus 207 ~Vd~~~L~~al~~~a~~~~~~~G~~v~i~~~t~V~~I~~~~~~~~~V~T~~G-~i~A~~VVvaAG~~S~~La~~~Gi 282 (497)
T PTZ00383 207 TVDYQKLSESFVKHARRDALVPGKKISINLNTEVLNIERSNDSLYKIHTNRG-EIRARFVVVSACGYSLLFAQKMGY 282 (497)
T ss_pred EECHHHHHHHHHHHHHhhhhhcCCCEEEEeCCEEEEEEecCCCeEEEEECCC-EEEeCEEEECcChhHHHHHHHhCC
Confidence 34456788888888888 77 889999999999876333333344455 699999999999999888887766
No 181
>TIGR01317 GOGAT_sm_gam glutamate synthases, NADH/NADPH, small subunit. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit or homologous region. TIGR01316 describes a family in several archaeal and deeply branched bacterial lineages of a homotetrameric form for which there is no large subunit. Another model describes glutamate synthase small subunit from gamma and some alpha subdivision Proteobacteria plus paralogs of unknown function. This model describes the small subunit, or homologous region of longer forms proteins, of eukaryotes, Gram-positive bacteria, cyanobacteria, and some other lineages. All members with known function participate in NADH or NADPH-dependent reactions to interconvert between glutamine plus 2-oxoglutarate and two molecules of glutamate.
Probab=98.68 E-value=1.6e-08 Score=111.94 Aligned_cols=35 Identities=29% Similarity=0.407 Sum_probs=31.4
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
.++|+|||+|++|+++|..|++. +.+|+|+|+.+.
T Consensus 143 ~~~V~IIGaG~aGl~aA~~L~~~--g~~V~v~e~~~~ 177 (485)
T TIGR01317 143 GKKVAVVGSGPAGLAAADQLNRA--GHTVTVFEREDR 177 (485)
T ss_pred CCEEEEECCcHHHHHHHHHHHHc--CCeEEEEecCCC
Confidence 36899999999999999999987 789999998664
No 182
>TIGR00292 thiazole biosynthesis enzyme. This enzyme is involved in the biosynthesis of the thiamine precursor thiazole, and is repressed by thiamine.This family includes c-thi1, a Citrus gene induced during natural and ethylene induced fruit maturation and is highly homologous to plant and yeast thi genes involved in thiamine biosynthesis.
Probab=98.68 E-value=1.1e-06 Score=88.43 Aligned_cols=119 Identities=8% Similarity=0.013 Sum_probs=72.7
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCC--EEEEEeCC-----------CceEEeecEEEECCCCCch--hhhhc-
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANK--EAVFKSED-----------KTERLPYAIMHVTPPMGPV--PELAT- 329 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~--~v~~~~~~-----------~g~~i~~D~vI~a~G~~~~--~~~~~- 329 (706)
..+.+.+.+.+.+.|++++.++.+.++..+++ .+..+... +..+++++.||.|+|.... .++.+
T Consensus 100 ~el~~~L~~~a~e~GV~I~~~t~V~dli~~~~~~~V~GVv~~~~~v~~~g~~~d~~~i~Ak~VVdATG~~a~v~~~l~~~ 179 (254)
T TIGR00292 100 AEFISTLASKALQAGAKIFNGTSVEDLITRDDTVGVAGVVINWSAIELAGLHVDPLTQRSRVVVDATGHDAEIVAVCAKK 179 (254)
T ss_pred HHHHHHHHHHHHHcCCEEECCcEEEEEEEeCCCCceEEEEeCCccccccCCCCCCEEEEcCEEEEeecCCchHHHHHHHH
Confidence 45666777788889999999999999875443 33332221 2357999999999997765 33333
Q ss_pred CCC-CCC-----CCce--------eeCccccccCCCCCEEEccccCCC--CCC---chHHHHHHhHHHHHHHHHHHH
Q psy8791 330 SRL-VDQ-----SGYV--------NVDKATLQHVKYSNVFAIGDCSNL--PTS---KTAAAVAGQCKVVYDNLSAVM 387 (706)
Q Consensus 330 ~~l-~~~-----~G~i--------~vd~~~l~~~~~~~Ifa~GD~~~~--~~~---~~~~~a~~qg~~~a~ni~~~l 387 (706)
.++ .+. .+-. .|+. |-. -+|++|++|=.++- ..| ++-......|+.+|+-|...+
T Consensus 180 ~~~~~~~~~~~g~~~~~~~~~e~~~~~~-t~~--~~~g~~~~gm~~~~~~~~~rmgp~fg~m~~sg~~~a~~~~~~~ 253 (254)
T TIGR00292 180 IVLEDQVPKLGGEKSMWAEVAEVAIHEN-TRE--VVPNLYVAGMAVAAVHGLPRMGPIFGGMLLSGKHVAEQILEKL 253 (254)
T ss_pred cCcccCCcccCCchhhhhhhhHHHHHhc-cCc--ccCCEEEechhhhhhcCCCCcCchHHHHHHhhHHHHHHHHHHh
Confidence 222 110 0111 1111 222 28999999965542 122 222234568899999888765
No 183
>COG1635 THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism]
Probab=98.68 E-value=5.6e-07 Score=84.32 Aligned_cols=34 Identities=24% Similarity=0.364 Sum_probs=32.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
.||+|||||++||+||++|++. +.+|++||++-+
T Consensus 31 sDViIVGaGPsGLtAAyyLAk~--g~kV~i~E~~ls 64 (262)
T COG1635 31 SDVIIVGAGPSGLTAAYYLAKA--GLKVAIFERKLS 64 (262)
T ss_pred ccEEEECcCcchHHHHHHHHhC--CceEEEEEeecc
Confidence 5899999999999999999999 999999999986
No 184
>PRK13984 putative oxidoreductase; Provisional
Probab=98.65 E-value=2.3e-08 Score=114.37 Aligned_cols=36 Identities=25% Similarity=0.324 Sum_probs=32.4
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
+.++|+|||+|+||+++|..|+++ +.+|+|+|+++.
T Consensus 282 ~~~~v~IIGaG~aGl~aA~~L~~~--G~~v~vie~~~~ 317 (604)
T PRK13984 282 KNKKVAIVGSGPAGLSAAYFLATM--GYEVTVYESLSK 317 (604)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCC
Confidence 467899999999999999999998 889999998664
No 185
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=98.53 E-value=7.7e-07 Score=97.16 Aligned_cols=76 Identities=14% Similarity=0.127 Sum_probs=53.7
Q ss_pred EEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCC----ceEEeecEEEECCCCCchhhhhcC
Q psy8791 255 YCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDK----TERLPYAIMHVTPPMGPVPELATS 330 (706)
Q Consensus 255 l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~----g~~i~~D~vI~a~G~~~~~~~~~~ 330 (706)
++.+......+..+...+.+.+++.|++++.+++|.+++.+++.++....++ +.++.+|.||+|+|.+........
T Consensus 186 ~~~~~~g~~~~~~~~~~l~~~a~~~G~~i~~~~~V~~i~~~~~~~~v~~~~~~~~~~~~i~a~~vV~a~G~~s~~l~~~~ 265 (410)
T PRK12409 186 YYTPSDSTGDIHKFTTGLAAACARLGVQFRYGQEVTSIKTDGGGVVLTVQPSAEHPSRTLEFDGVVVCAGVGSRALAAML 265 (410)
T ss_pred EEcCCCCccCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCccceEecCEEEECCCcChHHHHHHh
Confidence 3444433333456777788889999999999999999986555554432222 247899999999999987665543
No 186
>PRK11728 hydroxyglutarate oxidase; Provisional
Probab=98.51 E-value=3.3e-07 Score=99.35 Aligned_cols=75 Identities=11% Similarity=0.094 Sum_probs=56.2
Q ss_pred EeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhcCCC
Q psy8791 256 CTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELATSRL 332 (706)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~~l 332 (706)
..+......++.+.+.+.+.+++.|++++.+++|.+++.+++.+.+. +++| ++.+|.||.|+|.+.+..+...++
T Consensus 139 ~~p~~g~vd~~~l~~aL~~~~~~~Gv~i~~~~~V~~i~~~~~~~~V~-~~~g-~i~ad~vV~A~G~~s~~l~~~~g~ 213 (393)
T PRK11728 139 FVPSTGIVDYRAVAEAMAELIQARGGEIRLGAEVTALDEHANGVVVR-TTQG-EYEARTLINCAGLMSDRLAKMAGL 213 (393)
T ss_pred EcCCceEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEecCCeEEEE-ECCC-EEEeCEEEECCCcchHHHHHHhCC
Confidence 33333444467888899999999999999999999998665555433 3344 799999999999998766655443
No 187
>PF13434 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requiring); PDB: 3S61_B 3S5W_B.
Probab=98.51 E-value=7.7e-08 Score=101.02 Aligned_cols=43 Identities=19% Similarity=0.219 Sum_probs=30.3
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPM 509 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~ 509 (706)
+++|+|+||.|+++++.|..|.... ..++..+|+.+.+.|-|+
T Consensus 1 ~~~D~igIG~GP~nLslA~~l~~~~-~~~~~f~e~~~~f~Wh~g 43 (341)
T PF13434_consen 1 EIYDLIGIGFGPFNLSLAALLEEHG-DLKALFLERRPSFSWHPG 43 (341)
T ss_dssp -EESEEEE--SHHHHHHHHHHHHHH----EEEEES-SS--TTGG
T ss_pred CceeEEEEeeCHHHHHHHHHhhhcC-CCCEEEEecCCCCCcCCc
Confidence 3689999999999999999999874 579999999888877664
No 188
>KOG2755|consensus
Probab=98.51 E-value=4.5e-08 Score=93.53 Aligned_cols=79 Identities=18% Similarity=0.204 Sum_probs=51.9
Q ss_pred EEEEEcCCCeEEcCCCcEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHH
Q psy8791 604 IVSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPE 678 (706)
Q Consensus 604 v~~id~~~~~V~~~~g~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E 678 (706)
|..+|..+..+++.+|..+.|++|++|||++|.. ..+|.+.. +..+|+..+.........+.|.|.|+ .+|
T Consensus 73 v~~~~s~ehci~t~~g~~~ky~kKOG~tg~kPkl-q~E~~n~~---Iv~irDtDsaQllq~kl~kaK~VlilgnGgia~E 148 (334)
T KOG2755|consen 73 VVTWDSSEHCIHTQNGEKLKYFKLCLCTGYKPKL-QVEGINPK---IVGIRDTDSAQLLQCKLVKAKIVLILGNGGIAME 148 (334)
T ss_pred hhhhccccceEEecCCceeeEEEEEEecCCCcce-eecCCCce---EEEEecCcHHHHHHHHHhhcceEEEEecCchhHH
Confidence 7788888889999999999999999999999964 34443321 11122222222233334467788888 566
Q ss_pred HHHHHHHH
Q psy8791 679 IRAKAYDL 686 (706)
Q Consensus 679 ~A~~l~~~ 686 (706)
++-++..+
T Consensus 149 l~yElk~~ 156 (334)
T KOG2755|consen 149 LTYELKIL 156 (334)
T ss_pred HHHHhhcc
Confidence 66665443
No 189
>PLN02463 lycopene beta cyclase
Probab=98.50 E-value=3.9e-07 Score=99.27 Aligned_cols=109 Identities=23% Similarity=0.346 Sum_probs=72.1
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccc-----------------cccC-----ccccCc
Q psy8791 27 SSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFT-----------------LIGG-----GMKKLS 84 (706)
Q Consensus 27 ~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~-----------------~~~~-----~~~~~~ 84 (706)
....+||+|||||+||+++|..|++. |++|+|||+++...+...+. .... ......
T Consensus 25 ~~~~~DVvIVGaGpAGLalA~~La~~--Gl~V~liE~~~~~~~p~~~g~w~~~l~~lgl~~~l~~~w~~~~v~~~~~~~~ 102 (447)
T PLN02463 25 KSRVVDLVVVGGGPAGLAVAQQVSEA--GLSVCCIDPSPLSIWPNNYGVWVDEFEALGLLDCLDTTWPGAVVYIDDGKKK 102 (447)
T ss_pred cccCceEEEECCCHHHHHHHHHHHHC--CCeEEEeccCccchhccccchHHHHHHHCCcHHHHHhhCCCcEEEEeCCCCc
Confidence 34457999999999999999999998 99999999976432211000 0000 000000
Q ss_pred ccccccc-------------cccCCCcEEEEceeEEEEcCCC--EEEeCCCeEEEecEEEEccccccc
Q psy8791 85 DSRRPMK-------------SVLPSGATWVKDKIVSFDPENN--RVRTQAGSEISYEYMIVASGIQMY 137 (706)
Q Consensus 85 ~~~~~~~-------------~~~~~~v~~i~~~v~~id~~~~--~v~~~~g~~~~yd~lviAtG~~~~ 137 (706)
....++. .+...++++..++|++|+.+.. .|++++|.++.+|+||.|+|....
T Consensus 103 ~~~~~y~~V~R~~L~~~Ll~~~~~~GV~~~~~~V~~I~~~~~~~~V~~~dG~~i~A~lVI~AdG~~s~ 170 (447)
T PLN02463 103 DLDRPYGRVNRKKLKSKMLERCIANGVQFHQAKVKKVVHEESKSLVVCDDGVKIQASLVLDATGFSRC 170 (447)
T ss_pred cccCcceeEEHHHHHHHHHHHHhhcCCEEEeeEEEEEEEcCCeEEEEECCCCEEEcCEEEECcCCCcC
Confidence 0011111 1123578998889999886554 577788888999999999997654
No 190
>PRK10157 putative oxidoreductase FixC; Provisional
Probab=98.49 E-value=2.2e-06 Score=93.65 Aligned_cols=57 Identities=5% Similarity=0.028 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCc
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGP 323 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~ 323 (706)
..+.+.+.+.+++.|++++.+++|+++..+++.+..+.. +|.++.+|.||.|.|...
T Consensus 108 ~~fD~~L~~~a~~~Gv~i~~~~~V~~i~~~~g~v~~v~~-~g~~i~A~~VI~A~G~~s 164 (428)
T PRK10157 108 SKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEA-DGDVIEAKTVILADGVNS 164 (428)
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEeCCEEEEEEc-CCcEEECCEEEEEeCCCH
Confidence 345666777778899999999999998765555544433 567899999999999854
No 191
>PRK06847 hypothetical protein; Provisional
Probab=98.49 E-value=1.2e-06 Score=94.39 Aligned_cols=58 Identities=16% Similarity=0.177 Sum_probs=47.0
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
+.+.+.+.+.+.+.|++++.++++.+++.+++.+.+. +.+|+++.+|.||.|.|..+.
T Consensus 107 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~v~-~~~g~~~~ad~vI~AdG~~s~ 164 (375)
T PRK06847 107 PALARILADAARAAGADVRLGTTVTAIEQDDDGVTVT-FSDGTTGRYDLVVGADGLYSK 164 (375)
T ss_pred HHHHHHHHHHHHHhCCEEEeCCEEEEEEEcCCEEEEE-EcCCCEEEcCEEEECcCCCcc
Confidence 4567777888888899999999999998766555443 347888999999999998775
No 192
>PRK10015 oxidoreductase; Provisional
Probab=98.46 E-value=4.7e-06 Score=91.06 Aligned_cols=56 Identities=5% Similarity=-0.021 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCc
Q psy8791 267 FYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGP 323 (706)
Q Consensus 267 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~ 323 (706)
.+...+.+.+++.|++++.+++|+.+..+++.+..+.. ++.++.+|+||.|.|...
T Consensus 109 ~fd~~L~~~a~~~Gv~i~~~~~V~~i~~~~~~v~~v~~-~~~~i~A~~VI~AdG~~s 164 (429)
T PRK10015 109 RLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQA-GDDILEANVVILADGVNS 164 (429)
T ss_pred HHHHHHHHHHHHcCCEEECCcEEEEEEEeCCEEEEEEe-CCeEEECCEEEEccCcch
Confidence 45566777778889999999999998765555554333 456899999999999753
No 193
>PRK13977 myosin-cross-reactive antigen; Provisional
Probab=98.43 E-value=3.4e-06 Score=92.60 Aligned_cols=60 Identities=22% Similarity=0.153 Sum_probs=44.0
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCC--C--CEEEEEeCC---Cce---EEeecEEEECCCCCch
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLA--N--KEAVFKSED---KTE---RLPYAIMHVTPPMGPV 324 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~--~--~~v~~~~~~---~g~---~i~~D~vI~a~G~~~~ 324 (706)
.+.+...+.+.|+++||+++++++|+++..+ + +.|+..... +++ ..+.|+||+++|.-..
T Consensus 225 yeSLV~PL~~~Le~~GV~f~~~t~VtdL~~~~d~~~~~VtgI~~~~~~~~~~I~l~~~DlVivTnGs~t~ 294 (576)
T PRK13977 225 YESLVLPLIKYLEDHGVDFQYGTKVTDIDFDITGGKKTATAIHLTRNGKEETIDLTEDDLVFVTNGSITE 294 (576)
T ss_pred hhHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCCceEEEEEEEEeCCceeEEEecCCCEEEEeCCcCcc
Confidence 4788899999999999999999999998763 3 334332221 222 3579999999986544
No 194
>COG0644 FixC Dehydrogenases (flavoproteins) [Energy production and conversion]
Probab=98.42 E-value=3.7e-06 Score=91.06 Aligned_cols=58 Identities=5% Similarity=0.077 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 267 FYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 267 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
.+.+.+.+..++.|++++.++++..+..+++.++.....++.++.++.||.|.|....
T Consensus 96 ~fd~~La~~A~~aGae~~~~~~~~~~~~~~~~~~~~~~~~~~e~~a~~vI~AdG~~s~ 153 (396)
T COG0644 96 KFDKWLAERAEEAGAELYPGTRVTGVIREDDGVVVGVRAGDDEVRAKVVIDADGVNSA 153 (396)
T ss_pred HhhHHHHHHHHHcCCEEEeceEEEEEEEeCCcEEEEEEcCCEEEEcCEEEECCCcchH
Confidence 4556677788889999999999999986665444433334478999999999998764
No 195
>COG4529 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.42 E-value=4.3e-05 Score=80.90 Aligned_cols=117 Identities=17% Similarity=0.180 Sum_probs=67.3
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCE--EEEEeC--CCceEEeecEEEECCCCCch------hhhhc---CCC
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKE--AVFKSE--DKTERLPYAIMHVTPPMGPV------PELAT---SRL 332 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~--v~~~~~--~~g~~i~~D~vI~a~G~~~~------~~~~~---~~l 332 (706)
+.+...+.+.+.+.-++++-+ ++..|..++.. +.+..- .-.+.+++|.||-|+|..+. +++.. .|+
T Consensus 320 ~~v~~~~~~~~a~G~~~l~ag-~~~~i~~~~eg~~v~~r~rg~~~~~~l~~~~VIn~~g~~~~~~~~s~~~L~sl~~~Gl 398 (474)
T COG4529 320 PAVQAAVPQLLAEGLLELVAG-RVVSIDREGEGRAVTYRERGKQHEEELDVDAVINTTGPAHDNSLSSDPFLRSLGENGL 398 (474)
T ss_pred HHHHhhhhHHhhcchhheecC-ceeecccccCCceEEeeccccCccceeeeeEEEEcCCcCcCCCccchHHHHHHHhCCc
Confidence 445555556666666666666 55566544322 333211 12357899999999998765 23333 355
Q ss_pred --CC-CCCceeeCccccccCC-----CCCEEEccccCCCCCC--chHHHHHHhHHHHHHHHH
Q psy8791 333 --VD-QSGYVNVDKATLQHVK-----YSNVFAIGDCSNLPTS--KTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 333 --~~-~~G~i~vd~~~l~~~~-----~~~Ifa~GD~~~~~~~--~~~~~a~~qg~~~a~ni~ 384 (706)
.| ....|.|++ +.++.+ .++.||+|-.+..... ........|+..+|..+.
T Consensus 399 ~rpd~~~lGl~v~~-~~~v~~~~g~~~~~~fa~Gplt~G~f~ei~~vP~v~~qa~~~A~~l~ 459 (474)
T COG4529 399 ARPDPPGLGLDVSD-DSEVLGEDGERVTGLFAAGPLTRGTFWEIDGVPDVRVQAARLAAQLA 459 (474)
T ss_pred cccCCCCCceeeCC-CCcccCCCCccccCceeeccccCCchhhhccChHHHHHHHHHHHHHh
Confidence 22 234478877 566554 5789999977665311 112234566666666665
No 196
>TIGR01377 soxA_mon sarcosine oxidase, monomeric form. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms
Probab=98.42 E-value=1.8e-06 Score=93.30 Aligned_cols=76 Identities=16% Similarity=0.109 Sum_probs=56.4
Q ss_pred EEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhcCC
Q psy8791 254 TYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELATSR 331 (706)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~~ 331 (706)
.++.+......+..+...+.+.+++.|++++.+++|.+++.+++.+.+. ++++ ++.+|.||+|+|.+........+
T Consensus 133 ~~~~~~~g~i~p~~~~~~l~~~~~~~g~~~~~~~~V~~i~~~~~~~~v~-~~~~-~i~a~~vV~aaG~~~~~l~~~~g 208 (380)
T TIGR01377 133 GLLDPNGGVLYAEKALRALQELAEAHGATVRDGTKVVEIEPTELLVTVK-TTKG-SYQANKLVVTAGAWTSKLLSPLG 208 (380)
T ss_pred EEEcCCCcEEcHHHHHHHHHHHHHHcCCEEECCCeEEEEEecCCeEEEE-eCCC-EEEeCEEEEecCcchHHHhhhcc
Confidence 4445554444566778888888999999999999999998766655543 3344 79999999999988766655444
No 197
>PF13454 NAD_binding_9: FAD-NAD(P)-binding
Probab=98.40 E-value=9.5e-07 Score=82.10 Aligned_cols=37 Identities=24% Similarity=0.470 Sum_probs=31.3
Q ss_pred cEEEeceEEEEEcCCC--eEEcCCCcEEeeCEEEEecCc
Q psy8791 597 ATWVKDKIVSFDPENN--RVRTQAGSEISYEYMIVASGI 633 (706)
Q Consensus 597 v~~~~~~v~~id~~~~--~V~~~~g~~i~yd~lViAtGs 633 (706)
|.++..+|+.|++... .|.+++|..+.+|+||||||.
T Consensus 117 v~~~~~~V~~i~~~~~~~~v~~~~g~~~~~d~VvLa~Gh 155 (156)
T PF13454_consen 117 VRHVRAEVVDIRRDDDGYRVVTADGQSIRADAVVLATGH 155 (156)
T ss_pred EEEEeeEEEEEEEcCCcEEEEECCCCEEEeCEEEECCCC
Confidence 4458889999988755 477899999999999999995
No 198
>PRK00711 D-amino acid dehydrogenase small subunit; Validated
Probab=98.39 E-value=7.9e-06 Score=89.41 Aligned_cols=76 Identities=5% Similarity=-0.089 Sum_probs=56.5
Q ss_pred EEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhcC
Q psy8791 254 TYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELATS 330 (706)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~ 330 (706)
.++.+......+..+...+.+.+++.|++++.+++|++++.+++.+..+.++ +.++.+|.||.|+|.+....+...
T Consensus 189 a~~~p~~g~~~p~~~~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~v~t~-~~~~~a~~VV~a~G~~~~~l~~~~ 264 (416)
T PRK00711 189 GLRLPNDETGDCQLFTQRLAAMAEQLGVKFRFNTPVDGLLVEGGRITGVQTG-GGVITADAYVVALGSYSTALLKPL 264 (416)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHCCCEEEcCCEEEEEEecCCEEEEEEeC-CcEEeCCEEEECCCcchHHHHHHh
Confidence 3444544444456777888888999999999999999998766655434443 457999999999999887665544
No 199
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=98.39 E-value=6.4e-07 Score=103.26 Aligned_cols=36 Identities=17% Similarity=0.313 Sum_probs=32.1
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
..++|+|||||+||+++|..|++. +.+|+|+|+.+.
T Consensus 326 ~~~~VaIIGaGpAGLsaA~~L~~~--G~~V~V~E~~~~ 361 (654)
T PRK12769 326 SDKRVAIIGAGPAGLACADVLARN--GVAVTVYDRHPE 361 (654)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCC
Confidence 356999999999999999999998 889999998654
No 200
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=98.38 E-value=7.7e-07 Score=98.23 Aligned_cols=36 Identities=22% Similarity=0.312 Sum_probs=31.9
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
..++|+|||+|++|+++|..|+++ +.+|+++|+.+.
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~--G~~V~i~e~~~~ 175 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARA--GVQVVVFDRHPE 175 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHc--CCeEEEEecCCC
Confidence 346899999999999999999987 789999998664
No 201
>PRK01747 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Reviewed
Probab=98.37 E-value=2.3e-06 Score=98.99 Aligned_cols=84 Identities=8% Similarity=0.026 Sum_probs=58.6
Q ss_pred EEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhcC--CC
Q psy8791 255 YCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELATS--RL 332 (706)
Q Consensus 255 l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~--~l 332 (706)
++.+....+.+..+...+.+.+++ |++++.+++|.++..+++.+.+ .+++|..+.+|.||+|+|.......... .+
T Consensus 397 ~~~p~~G~v~p~~l~~aL~~~a~~-Gv~i~~~~~V~~i~~~~~~~~v-~t~~g~~~~ad~VV~A~G~~s~~l~~~~~lpl 474 (662)
T PRK01747 397 IFYPQGGWLCPAELCRALLALAGQ-QLTIHFGHEVARLEREDDGWQL-DFAGGTLASAPVVVLANGHDAARFAQTAHLPL 474 (662)
T ss_pred EEeCCCCeeCHHHHHHHHHHhccc-CcEEEeCCEeeEEEEeCCEEEE-EECCCcEEECCEEEECCCCCccccccccCCCc
Confidence 334444444467788888888888 9999999999999765555554 4456777889999999999876544322 33
Q ss_pred CCCCCcee
Q psy8791 333 VDQSGYVN 340 (706)
Q Consensus 333 ~~~~G~i~ 340 (706)
...+|++.
T Consensus 475 ~p~RGqv~ 482 (662)
T PRK01747 475 YSVRGQVS 482 (662)
T ss_pred ccccceEE
Confidence 44455543
No 202
>COG2509 Uncharacterized FAD-dependent dehydrogenases [General function prediction only]
Probab=98.36 E-value=3.6e-05 Score=80.30 Aligned_cols=65 Identities=14% Similarity=0.166 Sum_probs=58.4
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhc
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELAT 329 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~ 329 (706)
.+.+.+.+.+.++++|++++++++|+.|+.+++.+..+.+.+|.++++|.||+|+|....+|+..
T Consensus 172 l~~vvkni~~~l~~~G~ei~f~t~VeDi~~~~~~~~~v~~~~g~~i~~~~vvlA~Grsg~dw~~~ 236 (486)
T COG2509 172 LPKVVKNIREYLESLGGEIRFNTEVEDIEIEDNEVLGVKLTKGEEIEADYVVLAPGRSGRDWFEM 236 (486)
T ss_pred hHHHHHHHHHHHHhcCcEEEeeeEEEEEEecCCceEEEEccCCcEEecCEEEEccCcchHHHHHH
Confidence 47888999999999999999999999999877767777777999999999999999999988765
No 203
>TIGR01320 mal_quin_oxido malate:quinone-oxidoreductase. This membrane-associated enzyme is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle. The reduction of a quinone rather than NAD+ makes the reaction essentially irreversible in the direction of malate oxidation to oxaloacetate. Both forms of malate dehydrogenase are active in E. coli; disruption of this form causes less phenotypic change. In some bacteria, this form is the only or the more important malate dehydrogenase.
Probab=98.33 E-value=9.5e-06 Score=89.64 Aligned_cols=79 Identities=14% Similarity=0.170 Sum_probs=58.1
Q ss_pred EEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCC-CEEEE--EeCCCc--eEEeecEEEECCCCCchhhhh
Q psy8791 254 TYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLAN-KEAVF--KSEDKT--ERLPYAIMHVTPPMGPVPELA 328 (706)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~-~~v~~--~~~~~g--~~i~~D~vI~a~G~~~~~~~~ 328 (706)
.+..+......+..+...+.+.++++|++++.+++|.+++.++ +.+.. ..+++| .++.+|.||.|+|.+......
T Consensus 166 Al~~p~~g~Vdp~~l~~aL~~~a~~~Gv~i~~~t~V~~i~~~~~~~v~v~~~~~~~g~~~~i~A~~VV~AAG~~s~~La~ 245 (483)
T TIGR01320 166 ANWAAEGTDVDFGALTKQLLGYLVQNGTTIRFGHEVRNLKRQSDGSWTVTVKNTRTGGKRTLNTRFVFVGAGGGALPLLQ 245 (483)
T ss_pred EEEeCCCEEECHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCeEEEEEeeccCCceEEEECCEEEECCCcchHHHHH
Confidence 4444555444567888999999999999999999999998643 22322 222233 368999999999999988877
Q ss_pred cCCC
Q psy8791 329 TSRL 332 (706)
Q Consensus 329 ~~~l 332 (706)
..|+
T Consensus 246 ~~Gi 249 (483)
T TIGR01320 246 KSGI 249 (483)
T ss_pred HcCC
Confidence 7665
No 204
>TIGR03329 Phn_aa_oxid putative aminophosphonate oxidoreductase. This clade of sequences are members of the pfam01266 family of FAD-dependent oxidoreductases. Characterized proteins within this family include glycerol-3-phosphate dehydrogenase (1.1.99.5), sarcosine oxidase beta subunit (1.5.3.1) and a number of deaminating amino acid oxidases (1.4.-.-). These genes have been consistently observed in a genomic context including genes for the import and catabolism of 2-aminoethylphosphonate (AEP). If the substrate of this oxidoreductase is AEP itself, then it is probably acting in the manner of a deaminating oxidase, resulting in the same product (phosphonoacetaldehyde) as the transaminase PhnW (TIGR02326), but releasing ammonia instead of coupling to pyruvate:alanine. Alternatively, it is reasonable to suppose that the various ABC cassette transporters which are also associated with these loci allow the import of phosphonates closely related to AEP which may not be substrates for PhnW.
Probab=98.32 E-value=2.8e-05 Score=86.00 Aligned_cols=71 Identities=7% Similarity=0.159 Sum_probs=53.2
Q ss_pred EEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhh
Q psy8791 254 TYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPEL 327 (706)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~ 327 (706)
.++.+....+.+..+...+.+.+++.|++++.+++|.+++.++ .+. +.+++| ++.+|.||+|+|......+
T Consensus 171 g~~~~~~g~i~P~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~-~~~-v~t~~g-~v~A~~VV~Atga~s~~l~ 241 (460)
T TIGR03329 171 GFYSPVAASVQPGLLVRGLRRVALELGVEIHENTPMTGLEEGQ-PAV-VRTPDG-QVTADKVVLALNAWMASHF 241 (460)
T ss_pred EEEeCCCeEECHHHHHHHHHHHHHHcCCEEECCCeEEEEeeCC-ceE-EEeCCc-EEECCEEEEcccccccccC
Confidence 3555555555567888889999999999999999999997543 233 334455 6899999999998765443
No 205
>TIGR00136 gidA glucose-inhibited division protein A. GidA, the longer of two forms of GidA-related proteins, appears to be present in all complete eubacterial genomes so far, as well as Saccharomyces cerevisiae. A subset of these organisms have a closely related protein. GidA is absent in the Archaea. It appears to act with MnmE, in an alpha2/beta2 heterotetramer, in the 5-carboxymethylaminomethyl modification of uridine 34 in certain tRNAs. The shorter, related protein, previously called gid or gidA(S), is now called TrmFO (see model TIGR00137).
Probab=98.31 E-value=3.3e-05 Score=85.61 Aligned_cols=47 Identities=17% Similarity=0.127 Sum_probs=38.8
Q ss_pred CccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCCCC
Q psy8791 342 DKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNRAL 392 (706)
Q Consensus 342 d~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~~~ 392 (706)
++ +|+....+|+|++|++.... .-..|..||-+++-|+...+.|++.
T Consensus 349 ~~-~le~k~~~gLf~AGqi~Gt~---Gy~eAaa~Gl~Ag~naa~~~~~~~~ 395 (617)
T TIGR00136 349 KP-TLETKLIQGLFFAGQINGTT---GYEEAAAQGLMAGINAALKLQNKEP 395 (617)
T ss_pred ch-hheeCCCCCeEEccccCCcc---hHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 44 78877799999999977742 2458899999999999999998875
No 206
>PLN02661 Putative thiazole synthesis
Probab=98.30 E-value=5.4e-05 Score=78.44 Aligned_cols=114 Identities=7% Similarity=-0.018 Sum_probs=67.3
Q ss_pred HHHHhCCceEEcCCceEEEeCCCCEEEEEeC-------C-------CceEEeecEEEECCCCCch---hhhhc---CCCC
Q psy8791 274 DILIGRGVDVHKGKALVEIDLANKEAVFKSE-------D-------KTERLPYAIMHVTPPMGPV---PELAT---SRLV 333 (706)
Q Consensus 274 ~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~-------~-------~g~~i~~D~vI~a~G~~~~---~~~~~---~~l~ 333 (706)
+.+++.||+++.++.+.++..+++.+..+.. + +...+.++.||+|||..++ ..+.. .++.
T Consensus 181 ka~~~~gVkI~~~t~V~DLI~~~grVaGVVvnw~~v~~~~~~~s~~dp~~I~AkaVVlATGh~g~~ga~~~~~~~~~g~~ 260 (357)
T PLN02661 181 KLLARPNVKLFNAVAAEDLIVKGDRVGGVVTNWALVAQNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMI 260 (357)
T ss_pred HHHhcCCCEEEeCeEeeeEEecCCEEEEEEeecchhhhccCCCCccceeEEECCEEEEcCCCCCcchhhhhhcccccCCc
Confidence 4455689999999999888766555433321 0 1136899999999997764 11111 1221
Q ss_pred C---CCCceeeCc-------cccccCCCCCEEEccccCCC--CCC---chHHHHHHhHHHHHHHHHHHHcC
Q psy8791 334 D---QSGYVNVDK-------ATLQHVKYSNVFAIGDCSNL--PTS---KTAAAVAGQCKVVYDNLSAVMKN 389 (706)
Q Consensus 334 ~---~~G~i~vd~-------~~l~~~~~~~Ifa~GD~~~~--~~~---~~~~~a~~qg~~~a~ni~~~l~g 389 (706)
. .-..+.++. +|-+ =+|++|++|=.++- ..| ++-......|+.+|+.|...+..
T Consensus 261 ~~~pg~~~~~~~~~e~~~v~~t~e--v~pgl~~~gm~~~~~~g~~rmgp~fg~m~~sg~k~a~~~~~~l~~ 329 (357)
T PLN02661 261 DSVPGMKALDMNAAEDAIVRLTRE--VVPGMIVTGMEVAEIDGSPRMGPTFGAMMISGQKAAHLALKALGL 329 (357)
T ss_pred cCCCCccccchhhHHHHHHhccCc--ccCCEEEeccchhhhcCCCccCchhHhHHhhhHHHHHHHHHHHcc
Confidence 1 011111111 1222 28999999965432 112 22224457899999999999864
No 207
>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated
Probab=98.29 E-value=7.6e-06 Score=88.77 Aligned_cols=58 Identities=16% Similarity=0.252 Sum_probs=47.1
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
..+.+.+.+.+++.|++++.+++|++++.+++.+.+. +++|+++.+|+||.|.|..+.
T Consensus 113 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~v~-~~~g~~~~a~~vV~AdG~~S~ 170 (392)
T PRK08773 113 DLLVDRLWAALHAAGVQLHCPARVVALEQDADRVRLR-LDDGRRLEAALAIAADGAAST 170 (392)
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecCCeEEEE-ECCCCEEEeCEEEEecCCCch
Confidence 4566777788888999999999999998766656543 446788999999999999874
No 208
>PRK13339 malate:quinone oxidoreductase; Reviewed
Probab=98.28 E-value=9.3e-06 Score=89.16 Aligned_cols=79 Identities=13% Similarity=0.103 Sum_probs=55.4
Q ss_pred EEEeCCCcCCCchhHHHHHHHHHHh-CCceEEcCCceEEEeCC-CCEEEEE--eCCCce--EEeecEEEECCCCCchhhh
Q psy8791 254 TYCTGMGVLFPSPFYAEKIHDILIG-RGVDVHKGKALVEIDLA-NKEAVFK--SEDKTE--RLPYAIMHVTPPMGPVPEL 327 (706)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~-~~~v~~~--~~~~g~--~i~~D~vI~a~G~~~~~~~ 327 (706)
.+..+.........+.+.+.+.+.+ .|++++++++|..+..+ ++..... .+++++ ++.+|.||+|.|.+...++
T Consensus 172 Al~~p~~~~VD~~~L~~aL~~~l~~~~Gv~i~~~~~V~~I~~~~d~~w~v~v~~t~~g~~~~i~Ad~VV~AAGawS~~La 251 (497)
T PRK13339 172 ASKIDEGTDVNFGALTRKLAKHLESHPNAQVKYNHEVVDLERLSDGGWEVTVKDRNTGEKREQVADYVFIGAGGGAIPLL 251 (497)
T ss_pred EEECCCceecCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEECCCCCEEEEEEecCCCceEEEEcCEEEECCCcchHHHH
Confidence 3444444444456778888787754 59999999999998754 3322221 233442 6899999999999999888
Q ss_pred hcCCC
Q psy8791 328 ATSRL 332 (706)
Q Consensus 328 ~~~~l 332 (706)
..+|+
T Consensus 252 ~~~Gi 256 (497)
T PRK13339 252 QKSGI 256 (497)
T ss_pred HHcCC
Confidence 87765
No 209
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=98.27 E-value=2.5e-06 Score=97.97 Aligned_cols=36 Identities=22% Similarity=0.347 Sum_probs=32.2
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
..++|+|||+|+||+++|..|++. +.+|+|+|+.+.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~--G~~Vtv~e~~~~ 344 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARA--GVQVDVFDRHPE 344 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHc--CCcEEEEeCCCC
Confidence 357899999999999999999987 789999998664
No 210
>COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]
Probab=98.26 E-value=6.7e-06 Score=88.86 Aligned_cols=58 Identities=7% Similarity=0.034 Sum_probs=46.7
Q ss_pred hhHHHHHHHHHHhCC-ceEEcCCceEEEeCCCCEEEEEeCC-CceEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGRG-VDVHKGKALVEIDLANKEAVFKSED-KTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~g-V~v~~~~~v~~i~~~~~~v~~~~~~-~g~~i~~D~vI~a~G~~~~ 324 (706)
..+.+.+.+.+.+.+ |+++.++.|+.++.+++.+.. +.+ +|++++||++|-|=|....
T Consensus 104 ~~l~~~L~~~~~~~~~v~~~~~~~v~~~~~~~~~v~v-~l~~dG~~~~a~llVgADG~~S~ 163 (387)
T COG0654 104 SDLLNALLEAARALPNVTLRFGAEVEAVEQDGDGVTV-TLSFDGETLDADLLVGADGANSA 163 (387)
T ss_pred HHHHHHHHHHHhhCCCcEEEcCceEEEEEEcCCceEE-EEcCCCcEEecCEEEECCCCchH
Confidence 457777788887765 999999999999987766663 344 8889999999999997553
No 211
>PRK11259 solA N-methyltryptophan oxidase; Provisional
Probab=98.26 E-value=4.9e-06 Score=89.71 Aligned_cols=75 Identities=7% Similarity=0.018 Sum_probs=55.2
Q ss_pred EEEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhc
Q psy8791 253 LTYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELAT 329 (706)
Q Consensus 253 v~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~ 329 (706)
..++.+....+.+..+...+.+.+.+.|++++.+++|+++..+++.+.+. +++| ++.+|.||.|+|......+..
T Consensus 136 ~a~~~~~~g~v~p~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~-~~~g-~~~a~~vV~A~G~~~~~l~~~ 210 (376)
T PRK11259 136 IALFEPDGGFLRPELAIKAHLRLAREAGAELLFNEPVTAIEADGDGVTVT-TADG-TYEAKKLVVSAGAWVKDLLPP 210 (376)
T ss_pred eEEEcCCCCEEcHHHHHHHHHHHHHHCCCEEECCCEEEEEEeeCCeEEEE-eCCC-EEEeeEEEEecCcchhhhccc
Confidence 34455554445556777777788888999999999999998766555443 4455 799999999999987765543
No 212
>PRK05257 malate:quinone oxidoreductase; Validated
Probab=98.26 E-value=3.6e-05 Score=85.21 Aligned_cols=79 Identities=14% Similarity=0.181 Sum_probs=56.3
Q ss_pred EEEeCCCcCCCchhHHHHHHHHHHhCC-ceEEcCCceEEEeCCCC-EE--EEEeCCCce--EEeecEEEECCCCCchhhh
Q psy8791 254 TYCTGMGVLFPSPFYAEKIHDILIGRG-VDVHKGKALVEIDLANK-EA--VFKSEDKTE--RLPYAIMHVTPPMGPVPEL 327 (706)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~l~~~g-V~v~~~~~v~~i~~~~~-~v--~~~~~~~g~--~i~~D~vI~a~G~~~~~~~ 327 (706)
.+..+......+..+.+.+.+.+++.| ++++++++|.+++.+++ .+ ....+++|+ ++.+|.||.|+|.+....+
T Consensus 171 Al~~p~~g~Vd~~~l~~aL~~~a~~~Ggv~i~~~teV~~I~~~~dg~~~v~~~~~~~G~~~~i~A~~VVvaAGg~s~~L~ 250 (494)
T PRK05257 171 ATRIEIGTDVNFGALTRQLVGYLQKQGNFELQLGHEVRDIKRNDDGSWTVTVKDLKTGEKRTVRAKFVFIGAGGGALPLL 250 (494)
T ss_pred EEEcCCceEECHHHHHHHHHHHHHhCCCeEEEeCCEEEEEEECCCCCEEEEEEEcCCCceEEEEcCEEEECCCcchHHHH
Confidence 344444444456778888888898886 89999999999986333 23 222223343 6999999999999998887
Q ss_pred hcCCC
Q psy8791 328 ATSRL 332 (706)
Q Consensus 328 ~~~~l 332 (706)
...|+
T Consensus 251 ~~~Gi 255 (494)
T PRK05257 251 QKSGI 255 (494)
T ss_pred HHcCC
Confidence 76665
No 213
>PLN02463 lycopene beta cyclase
Probab=98.25 E-value=2.2e-06 Score=93.39 Aligned_cols=43 Identities=19% Similarity=0.280 Sum_probs=35.9
Q ss_pred CCcEEEeceEEEEEcCCC--eEEcCCCcEEeeCEEEEecCcccCc
Q psy8791 595 SGATWVKDKIVSFDPENN--RVRTQAGSEISYEYMIVASGIQMYY 637 (706)
Q Consensus 595 ~gv~~~~~~v~~id~~~~--~V~~~~g~~i~yd~lViAtGs~~~~ 637 (706)
.|+++..++|++|+.+.. .|++++|+++.+|.||.|+|..+..
T Consensus 127 ~GV~~~~~~V~~I~~~~~~~~V~~~dG~~i~A~lVI~AdG~~s~l 171 (447)
T PLN02463 127 NGVQFHQAKVKKVVHEESKSLVVCDDGVKIQASLVLDATGFSRCL 171 (447)
T ss_pred cCCEEEeeEEEEEEEcCCeEEEEECCCCEEEcCEEEECcCCCcCc
Confidence 589998889999987654 4778889899999999999987653
No 214
>TIGR02032 GG-red-SF geranylgeranyl reductase family. This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates.
Probab=98.25 E-value=2.5e-06 Score=88.54 Aligned_cols=34 Identities=32% Similarity=0.448 Sum_probs=31.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
+||+|||||+||+++|..|++. +.+|+|||+.+.
T Consensus 1 ~dv~IiGaG~aGl~~A~~l~~~--g~~v~vie~~~~ 34 (295)
T TIGR02032 1 YDVVVVGAGPAGASAAYRLADK--GLRVLLLEKKSF 34 (295)
T ss_pred CCEEEECCCHHHHHHHHHHHHC--CCeEEEEeccCC
Confidence 5899999999999999999998 899999999875
No 215
>TIGR01373 soxB sarcosine oxidase, beta subunit family, heterotetrameric form. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms.
Probab=98.24 E-value=1e-05 Score=88.33 Aligned_cols=76 Identities=11% Similarity=-0.106 Sum_probs=52.0
Q ss_pred EEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeC-CCCEEEEEeCCCceEEeecEEEECCCCCchhhhhcC
Q psy8791 254 TYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDL-ANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELATS 330 (706)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~-~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~ 330 (706)
.++.+......+..+...+.+.+++.|++++.+++|.+++. +++.+..+.+++| ++.+|.||+|+|-.........
T Consensus 171 a~~~~~~g~v~p~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~~~v~t~~g-~i~a~~vVvaagg~~~~l~~~~ 247 (407)
T TIGR01373 171 GLLQRRGGTARHDAVAWGYARGADRRGVDIIQNCEVTGFIRRDGGRVIGVETTRG-FIGAKKVGVAVAGHSSVVAAMA 247 (407)
T ss_pred EEEcCCCCcCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEeCCc-eEECCEEEECCChhhHHHHHHc
Confidence 34444443444456667777888999999999999999964 3344443444455 6899999999888766544433
No 216
>KOG1800|consensus
Probab=98.24 E-value=2e-06 Score=86.92 Aligned_cols=38 Identities=26% Similarity=0.303 Sum_probs=33.6
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..+|.|||+|+||+.+|..|.++.++.+|.|+|+.+.+
T Consensus 20 ~p~vcIVGsGPAGfYtA~~LLk~~~~~~Vdi~Ek~PvP 57 (468)
T KOG1800|consen 20 TPRVCIVGSGPAGFYTAQHLLKRHPNAHVDIFEKLPVP 57 (468)
T ss_pred CceEEEECCCchHHHHHHHHHhcCCCCeeEeeecCCcc
Confidence 44899999999999999999998778999999997653
No 217
>PRK06847 hypothetical protein; Provisional
Probab=98.23 E-value=2.8e-06 Score=91.55 Aligned_cols=37 Identities=27% Similarity=0.338 Sum_probs=33.2
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
+++||+|||||+||+++|..|++. +.+|+|+|+++..
T Consensus 3 ~~~~V~IVGaG~aGl~~A~~L~~~--g~~v~v~E~~~~~ 39 (375)
T PRK06847 3 AVKKVLIVGGGIGGLSAAIALRRA--GIAVDLVEIDPEW 39 (375)
T ss_pred CcceEEEECCCHHHHHHHHHHHhC--CCCEEEEecCCCC
Confidence 577999999999999999999987 8999999987653
No 218
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=98.22 E-value=1.7e-06 Score=70.42 Aligned_cols=76 Identities=21% Similarity=0.407 Sum_probs=54.4
Q ss_pred cEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCcccccc-cccccCCCcEEEE-ceeEEEE
Q psy8791 32 KLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRP-MKSVLPSGATWVK-DKIVSFD 109 (706)
Q Consensus 32 ~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~i~-~~v~~id 109 (706)
+|+|||||+.|+-+|..|++. +.+|+||++++... +.+ ++ ..... .+.+.+.+++++. ..+++++
T Consensus 1 ~vvViGgG~ig~E~A~~l~~~--g~~vtli~~~~~~~--~~~--------~~-~~~~~~~~~l~~~gV~v~~~~~v~~i~ 67 (80)
T PF00070_consen 1 RVVVIGGGFIGIELAEALAEL--GKEVTLIERSDRLL--PGF--------DP-DAAKILEEYLRKRGVEVHTNTKVKEIE 67 (80)
T ss_dssp EEEEESSSHHHHHHHHHHHHT--TSEEEEEESSSSSS--TTS--------SH-HHHHHHHHHHHHTTEEEEESEEEEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHh--CcEEEEEeccchhh--hhc--------CH-HHHHHHHHHHHHCCCEEEeCCEEEEEE
Confidence 589999999999999999998 89999999999643 211 11 11111 2233347999987 6788888
Q ss_pred cCCCE--EEeCCC
Q psy8791 110 PENNR--VRTQAG 120 (706)
Q Consensus 110 ~~~~~--v~~~~g 120 (706)
.+... |+++||
T Consensus 68 ~~~~~~~V~~~~g 80 (80)
T PF00070_consen 68 KDGDGVEVTLEDG 80 (80)
T ss_dssp EETTSEEEEEETS
T ss_pred EeCCEEEEEEecC
Confidence 77653 666654
No 219
>COG1233 Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.22 E-value=3.7e-06 Score=93.27 Aligned_cols=57 Identities=9% Similarity=0.104 Sum_probs=47.6
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCC
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPM 321 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~ 321 (706)
...+.+.+.+.+++.|++|+++++|++|..++++.+.+.+.+|+.+++|.||.+...
T Consensus 223 ~~al~~aL~~~~~~~Gg~I~~~~~V~~I~v~~g~g~~~~~~~g~~~~ad~vv~~~~~ 279 (487)
T COG1233 223 MGALVDALAELAREHGGEIRTGAEVSQILVEGGKGVGVRTSDGENIEADAVVSNADP 279 (487)
T ss_pred HHHHHHHHHHHHHHcCCEEECCCceEEEEEeCCcceEEeccccceeccceeEecCch
Confidence 578999999999999999999999999998776533344456678999999998777
No 220
>PF05834 Lycopene_cycl: Lycopene cyclase protein; InterPro: IPR008671 This family consists of lycopene beta and epsilon cyclase proteins. Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclisation of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare [].; GO: 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0016117 carotenoid biosynthetic process
Probab=98.21 E-value=8.1e-06 Score=87.65 Aligned_cols=106 Identities=16% Similarity=0.194 Sum_probs=68.6
Q ss_pred cEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCc--ccccc--------------------cCccccCcccccc
Q psy8791 32 KLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQP--MFTLI--------------------GGGMKKLSDSRRP 89 (706)
Q Consensus 32 ~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p--~~~~~--------------------~~~~~~~~~~~~~ 89 (706)
||+|||||+||+++|.+|++..++.+|+|||+++...+.. .|... ............+
T Consensus 1 DviIvGaGpAGlslA~~l~~~~~g~~Vllid~~~~~~~~~~~tW~~~~~~~~~~~~~v~~~w~~~~v~~~~~~~~~~~~~ 80 (374)
T PF05834_consen 1 DVIIVGAGPAGLSLARRLADARPGLSVLLIDPKPKPPWPNDRTWCFWEKDLGPLDSLVSHRWSGWRVYFPDGSRILIDYP 80 (374)
T ss_pred CEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCccccccCCcccccccccccchHHHHheecCceEEEeCCCceEEcccc
Confidence 7999999999999999995544589999999876532110 00000 0000000000011
Q ss_pred cc-------------cccCCCcEEEEceeEEEEcCCC--EEEeCCCeEEEecEEEEccccccc
Q psy8791 90 MK-------------SVLPSGATWVKDKIVSFDPENN--RVRTQAGSEISYEYMIVASGIQMY 137 (706)
Q Consensus 90 ~~-------------~~~~~~v~~i~~~v~~id~~~~--~v~~~~g~~~~yd~lviAtG~~~~ 137 (706)
+. ++...++.++.++|++|+.... .|.+++|.++.++++|-|.|....
T Consensus 81 Y~~i~~~~f~~~l~~~~~~~~~~~~~~~V~~i~~~~~~~~v~~~~g~~i~a~~VvDa~g~~~~ 143 (374)
T PF05834_consen 81 YCMIDRADFYEFLLERAAAGGVIRLNARVTSIEETGDGVLVVLADGRTIRARVVVDARGPSSP 143 (374)
T ss_pred eEEEEHHHHHHHHHHHhhhCCeEEEccEEEEEEecCceEEEEECCCCEEEeeEEEECCCcccc
Confidence 11 0111356777889999988776 678889989999999999996544
No 221
>TIGR01790 carotene-cycl lycopene cyclase family protein. This family includes lycopene beta and epsilion cyclases (which form beta and delta carotene, respectively) from bacteria and plants as well as the plant capsanthin/capsorubin and neoxanthin cyclases which appear to have evolved from the plant lycopene cyclases. The plant lycopene epsilon cyclases also transform neurosporene to alpha zeacarotene.
Probab=98.21 E-value=2.9e-06 Score=91.96 Aligned_cols=103 Identities=19% Similarity=0.290 Sum_probs=66.1
Q ss_pred cEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccc----------------cccCc-c-cc-C-cc--cccc
Q psy8791 32 KLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFT----------------LIGGG-M-KK-L-SD--SRRP 89 (706)
Q Consensus 32 ~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~----------------~~~~~-~-~~-~-~~--~~~~ 89 (706)
||+|||||+||+++|+.|++. |++|+|||+++.......+. ....+ . .. . .. ...+
T Consensus 1 DviIiGaG~AGl~~A~~la~~--g~~v~liE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (388)
T TIGR01790 1 DLAVIGGGPAGLAIALELARP--GLRVQLIEPHPPIPGNHTYGVWDDDLSDLGLADCVEHVWPDVYEYRFPKQPRKLGTA 78 (388)
T ss_pred CEEEECCCHHHHHHHHHHHhC--CCeEEEEccCCCCCCCccccccHhhhhhhchhhHHhhcCCCceEEecCCcchhcCCc
Confidence 699999999999999999988 89999999986532210000 00000 0 00 0 00 0001
Q ss_pred cc-------------cccCCCcEEEEceeEEEEcC-CC--EEEeCCCeEEEecEEEEcccccc
Q psy8791 90 MK-------------SVLPSGATWVKDKIVSFDPE-NN--RVRTQAGSEISYEYMIVASGIQM 136 (706)
Q Consensus 90 ~~-------------~~~~~~v~~i~~~v~~id~~-~~--~v~~~~g~~~~yd~lviAtG~~~ 136 (706)
+. .+...++++..++|+.+..+ .. .|++++|.++.+|+||.|+|..+
T Consensus 79 ~~~i~~~~l~~~l~~~~~~~gv~~~~~~v~~i~~~~~~~~~v~~~~g~~~~a~~VI~A~G~~s 141 (388)
T TIGR01790 79 YGSVDSTRLHEELLQKCPEGGVLWLERKAIHAEADGVALSTVYCAGGQRIQARLVIDARGFGP 141 (388)
T ss_pred eeEEcHHHHHHHHHHHHHhcCcEEEccEEEEEEecCCceeEEEeCCCCEEEeCEEEECCCCch
Confidence 10 01124678878888888765 22 46667777899999999999765
No 222
>PRK06184 hypothetical protein; Provisional
Probab=98.21 E-value=1.3e-05 Score=89.81 Aligned_cols=58 Identities=12% Similarity=0.031 Sum_probs=45.0
Q ss_pred hHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEE--eCCCceEEeecEEEECCCCCch
Q psy8791 267 FYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFK--SEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 267 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~--~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
.+.+.+.+.+.+.|++++.++++.+++.+++.++.. ..++++++.+|.||-|.|....
T Consensus 110 ~le~~L~~~l~~~gv~i~~~~~v~~i~~~~~~v~v~~~~~~~~~~i~a~~vVgADG~~S~ 169 (502)
T PRK06184 110 RTERILRERLAELGHRVEFGCELVGFEQDADGVTARVAGPAGEETVRARYLVGADGGRSF 169 (502)
T ss_pred HHHHHHHHHHHHCCCEEEeCcEEEEEEEcCCcEEEEEEeCCCeEEEEeCEEEECCCCchH
Confidence 455667777888899999999999998765554432 2246678999999999998864
No 223
>TIGR02734 crtI_fam phytoene desaturase. Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger Pfam family pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis.
Probab=98.21 E-value=9.5e-06 Score=91.06 Aligned_cols=58 Identities=10% Similarity=0.079 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCc
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGP 323 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~ 323 (706)
..+.+.+.+.++++|++++++++|++|..+++.++.+.+++|+++.+|.||+|++...
T Consensus 219 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~V~~~~g~~~~ad~VI~a~~~~~ 276 (502)
T TIGR02734 219 GALVAAMAKLAEDLGGELRLNAEVIRIETEGGRATAVHLADGERLDADAVVSNADLHH 276 (502)
T ss_pred HHHHHHHHHHHHHCCCEEEECCeEEEEEeeCCEEEEEEECCCCEEECCEEEECCcHHH
Confidence 5788889999999999999999999998766655555556788899999999988643
No 224
>COG4529 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.21 E-value=6e-06 Score=87.22 Aligned_cols=90 Identities=12% Similarity=0.144 Sum_probs=53.8
Q ss_pred cEEEeceEEEEEcCC----CeEEcCCCcEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccch--hhhccCc
Q psy8791 597 ATWVKDKIVSFDPEN----NRVRTQAGSEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTV--TWEQKHK 670 (706)
Q Consensus 597 v~~~~~~v~~id~~~----~~V~~~~g~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~k 670 (706)
+.+++++++++.+.. ..+...+|....+|-+|+|||..+..++. ....+.+... -+.+.+... +......
T Consensus 122 v~~~~~~a~~~~~~~n~~~~~~~~~~g~~~~ad~~Vlatgh~~~~~~~--~~~~~~~~~~--~ia~~~~~~~ld~v~~~d 197 (474)
T COG4529 122 VRTIREEATSVRQDTNAGGYLVTTADGPSEIADIIVLATGHSAPPADP--AARDLKGSPR--LIADPYPANALDGVDADD 197 (474)
T ss_pred eeEEeeeeecceeccCCceEEEecCCCCeeeeeEEEEeccCCCCCcch--hhhccCCCcc--eeccccCCcccccccCCC
Confidence 777899988887762 24677889899999999999987655443 2111221111 011111111 1112334
Q ss_pred cEEEE--cHHHHHHHHHHHhhh
Q psy8791 671 QYQLV--SPEIRAKAYDLTKRK 690 (706)
Q Consensus 671 ~vvVi--G~E~A~~l~~~~~~~ 690 (706)
+|+|+ |+.++..+..+..+-
T Consensus 198 rVli~GsgLt~~D~v~~l~~~g 219 (474)
T COG4529 198 RVLIVGSGLTSIDQVLVLRRRG 219 (474)
T ss_pred ceEEecCCchhHHHHHHHhccC
Confidence 58888 888888777665543
No 225
>PLN02697 lycopene epsilon cyclase
Probab=98.20 E-value=4.9e-06 Score=92.18 Aligned_cols=107 Identities=23% Similarity=0.315 Sum_probs=67.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcc--c---Cccccccc---------------CccccCcccc
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHY--Y---QPMFTLIG---------------GGMKKLSDSR 87 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~--~---~p~~~~~~---------------~~~~~~~~~~ 87 (706)
...+||+|||||+||+++|..|++. |++|+|||+..... + ...+.... ..........
T Consensus 106 ~~~~DVvIVGaGPAGLalA~~Lak~--Gl~V~LIe~~~p~~~n~GvW~~~l~~lgl~~~i~~~w~~~~v~~~~~~~~~~~ 183 (529)
T PLN02697 106 DGTLDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTNNYGVWEDEFKDLGLEDCIEHVWRDTIVYLDDDKPIMIG 183 (529)
T ss_pred cCcccEEEECcCHHHHHHHHHHHhC--CCcEEEecCcccCCCccccchhHHHhcCcHHHHHhhcCCcEEEecCCceeecc
Confidence 3458999999999999999999998 99999999853211 0 00000000 0000000000
Q ss_pred cccc---------cc----cCCCcEEEEceeEEEEcCCCE---EEeCCCeEEEecEEEEcccccc
Q psy8791 88 RPMK---------SV----LPSGATWVKDKIVSFDPENNR---VRTQAGSEISYEYMIVASGIQM 136 (706)
Q Consensus 88 ~~~~---------~~----~~~~v~~i~~~v~~id~~~~~---v~~~~g~~~~yd~lviAtG~~~ 136 (706)
.++. .+ ...++++..++|+.|..+... +.+.+|.++.++.||.|+|...
T Consensus 184 ~~Yg~V~R~~L~~~Ll~~a~~~GV~~~~~~V~~I~~~~~~~~vv~~~dG~~i~A~lVI~AdG~~S 248 (529)
T PLN02697 184 RAYGRVSRTLLHEELLRRCVESGVSYLSSKVDRITEASDGLRLVACEDGRVIPCRLATVASGAAS 248 (529)
T ss_pred CcccEEcHHHHHHHHHHHHHhcCCEEEeeEEEEEEEcCCcEEEEEEcCCcEEECCEEEECCCcCh
Confidence 1111 11 125788888899998754432 3456778899999999999765
No 226
>PRK07333 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional
Probab=98.20 E-value=9.9e-06 Score=88.24 Aligned_cols=58 Identities=5% Similarity=0.110 Sum_probs=47.5
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
..+.+.+.+.+.+.|++++.+++|++++.+++.+.+. .++|+++.+|+||.|.|..+.
T Consensus 111 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~-~~~g~~~~ad~vI~AdG~~S~ 168 (403)
T PRK07333 111 RVLINALRKRAEALGIDLREATSVTDFETRDEGVTVT-LSDGSVLEARLLVAADGARSK 168 (403)
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEcCCEEEEE-ECCCCEEEeCEEEEcCCCChH
Confidence 4677778888888999999999999998766655543 347788999999999998765
No 227
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=98.19 E-value=9.9e-06 Score=88.64 Aligned_cols=39 Identities=23% Similarity=0.469 Sum_probs=35.3
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 26 SSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 26 ~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
+....++|+|||||+||+++|..|++. |++|+|||+.+.
T Consensus 14 ~~~~~~dV~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~ 52 (415)
T PRK07364 14 TRSLTYDVAIVGGGIVGLTLAAALKDS--GLRIALIEAQPA 52 (415)
T ss_pred CCccccCEEEECcCHHHHHHHHHHhcC--CCEEEEEecCCc
Confidence 444568999999999999999999999 999999999985
No 228
>PRK11101 glpA sn-glycerol-3-phosphate dehydrogenase subunit A; Provisional
Probab=98.19 E-value=7.6e-05 Score=84.16 Aligned_cols=86 Identities=5% Similarity=-0.156 Sum_probs=58.3
Q ss_pred EEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEe---CCC--ceEEeecEEEECCCCCchhhhh
Q psy8791 254 TYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKS---EDK--TERLPYAIMHVTPPMGPVPELA 328 (706)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~---~~~--g~~i~~D~vI~a~G~~~~~~~~ 328 (706)
.+..+. ....+..+...+....+++|++++.+++|+++..+++.++.+. ..+ +.++.+|.||.|+|.+...+..
T Consensus 138 a~~~~d-g~vdp~rl~~al~~~A~~~Ga~i~~~t~V~~i~~~~~~v~gv~v~d~~~g~~~~i~A~~VVnAaG~wa~~l~~ 216 (546)
T PRK11101 138 AVKVPD-GTVDPFRLTAANMLDAKEHGAQILTYHEVTGLIREGDTVCGVRVRDHLTGETQEIHAPVVVNAAGIWGQHIAE 216 (546)
T ss_pred EEEecC-cEECHHHHHHHHHHHHHhCCCEEEeccEEEEEEEcCCeEEEEEEEEcCCCcEEEEECCEEEECCChhHHHHHH
Confidence 344443 3344667777777888899999999999999987655443222 222 3579999999999999887665
Q ss_pred cCCC----CCCCCcee
Q psy8791 329 TSRL----VDQSGYVN 340 (706)
Q Consensus 329 ~~~l----~~~~G~i~ 340 (706)
..++ ...+|...
T Consensus 217 ~~g~~~~i~p~kG~~l 232 (546)
T PRK11101 217 YADLRIRMFPAKGSLL 232 (546)
T ss_pred hcCCCCceeecceEEE
Confidence 4432 34455443
No 229
>PF01134 GIDA: Glucose inhibited division protein A; InterPro: IPR002218 GidA is a tRNA modification enzyme found in bacteria and mitochondria. Though its precise molecular function of these proteins is not known, it is involved in the 5-carboxymethylaminomethyl modification of the wobble uridine base in some tRNAs [, ]. Sequence variations in the human mitochondrial protein may influence the severity of aminoglycoside-induced deafness []. This entry is found in GidA and related proteins, such as the methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase enzyme TrmFO.; GO: 0050660 flavin adenine dinucleotide binding, 0008033 tRNA processing; PDB: 3CES_C 3CP2_A 3G05_A 2CUL_A 3CP8_A 2ZXI_B 2ZXH_A 3G5S_A 3G5R_A 3G5Q_A.
Probab=98.18 E-value=1.9e-06 Score=90.51 Aligned_cols=101 Identities=26% Similarity=0.388 Sum_probs=63.1
Q ss_pred cEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCC-CCcc---cCcccccc-------------------------------
Q psy8791 32 KLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPT-DDHY---YQPMFTLI------------------------------- 76 (706)
Q Consensus 32 ~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~-~~~~---~~p~~~~~------------------------------- 76 (706)
||+|||||.||+.||+.+++. |++|+|+..+ +... ..|++...
T Consensus 1 DViVVGgG~AG~eAA~aaAr~--G~~V~Lit~~~d~i~~~~Cnpsigg~~kg~L~~Eidalgg~m~~~aD~~~i~~~~lN 78 (392)
T PF01134_consen 1 DVIVVGGGHAGCEAALAAARM--GAKVLLITHNTDTIGEMSCNPSIGGIAKGHLVREIDALGGLMGRAADETGIHFRMLN 78 (392)
T ss_dssp EEEEESSSHHHHHHHHHHHHT--T--EEEEES-GGGTT--SSSSEEESTTHHHHHHHHHHTT-SHHHHHHHHEEEEEEES
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCCEEEEeecccccccccchhhhccccccchhHHHhhhhhHHHHHHhHhhhhhhccc
Confidence 799999999999999999999 9999999433 2211 11221100
Q ss_pred ----cCccc-----cCccccccccccc-C-CCcEEEEceeEEEEcCCCE---EEeCCCeEEEecEEEEcccc
Q psy8791 77 ----GGGMK-----KLSDSRRPMKSVL-P-SGATWVKDKIVSFDPENNR---VRTQAGSEISYEYMIVASGI 134 (706)
Q Consensus 77 ----~~~~~-----~~~~~~~~~~~~~-~-~~v~~i~~~v~~id~~~~~---v~~~~g~~~~yd~lviAtG~ 134 (706)
+.+.. +.......+.+.+ . .++++++++|++|..+++. |.+.+|..+.+|.+|+|||.
T Consensus 79 ~skGpav~a~r~qvDr~~y~~~~~~~l~~~~nl~i~~~~V~~l~~e~~~v~GV~~~~g~~~~a~~vVlaTGt 150 (392)
T PF01134_consen 79 RSKGPAVHALRAQVDRDKYSRAMREKLESHPNLTIIQGEVTDLIVENGKVKGVVTKDGEEIEADAVVLATGT 150 (392)
T ss_dssp TTS-GGCTEEEEEE-HHHHHHHHHHHHHTSTTEEEEES-EEEEEECTTEEEEEEETTSEEEEECEEEE-TTT
T ss_pred ccCCCCccchHhhccHHHHHHHHHHHHhcCCCeEEEEcccceEEecCCeEEEEEeCCCCEEecCEEEEeccc
Confidence 00000 0000111111221 2 6899999999999887764 67788999999999999997
No 230
>TIGR00275 flavoprotein, HI0933 family. The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae.
Probab=98.18 E-value=3.1e-05 Score=83.81 Aligned_cols=56 Identities=7% Similarity=-0.023 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCc
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGP 323 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~ 323 (706)
..+.+.+.+.+++.|+++++++.|.++..+++.+.+. + +++++.+|.||+|+|...
T Consensus 105 ~~v~~~L~~~l~~~gv~i~~~~~V~~i~~~~~~~~v~-~-~~~~i~ad~VIlAtG~~s 160 (400)
T TIGR00275 105 ADVLDALLNELKELGVEILTNSKVKSIKKDDNGFGVE-T-SGGEYEADKVILATGGLS 160 (400)
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEecCCeEEEE-E-CCcEEEcCEEEECCCCcc
Confidence 6778888899999999999999999997665544433 2 456799999999999754
No 231
>PF05834 Lycopene_cycl: Lycopene cyclase protein; InterPro: IPR008671 This family consists of lycopene beta and epsilon cyclase proteins. Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclisation of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare [].; GO: 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0016117 carotenoid biosynthetic process
Probab=98.18 E-value=5.2e-06 Score=89.14 Aligned_cols=42 Identities=17% Similarity=0.234 Sum_probs=36.0
Q ss_pred CCcEEEeceEEEEEcCCC--eEEcCCCcEEeeCEEEEecCcccC
Q psy8791 595 SGATWVKDKIVSFDPENN--RVRTQAGSEISYEYMIVASGIQMY 636 (706)
Q Consensus 595 ~gv~~~~~~v~~id~~~~--~V~~~~g~~i~yd~lViAtGs~~~ 636 (706)
.++.++.++|++|+.... .|++++|+++.++.||-|+|..+.
T Consensus 100 ~~~~~~~~~V~~i~~~~~~~~v~~~~g~~i~a~~VvDa~g~~~~ 143 (374)
T PF05834_consen 100 GGVIRLNARVTSIEETGDGVLVVLADGRTIRARVVVDARGPSSP 143 (374)
T ss_pred CCeEEEccEEEEEEecCceEEEEECCCCEEEeeEEEECCCcccc
Confidence 477789999999998776 578899999999999999996654
No 232
>PRK07588 hypothetical protein; Provisional
Probab=98.18 E-value=9.6e-06 Score=87.93 Aligned_cols=55 Identities=9% Similarity=0.052 Sum_probs=41.1
Q ss_pred HHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 268 YAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 268 ~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
+.+.+.+.+. .|++++.+++|++++.+++.+.+ .+++|+++++|+||-|-|.+..
T Consensus 105 l~~~L~~~~~-~~v~i~~~~~v~~i~~~~~~v~v-~~~~g~~~~~d~vIgADG~~S~ 159 (391)
T PRK07588 105 LAAAIYTAID-GQVETIFDDSIATIDEHRDGVRV-TFERGTPRDFDLVIGADGLHSH 159 (391)
T ss_pred HHHHHHHhhh-cCeEEEeCCEEeEEEECCCeEEE-EECCCCEEEeCEEEECCCCCcc
Confidence 4444444443 47999999999999877666654 3457888999999999998654
No 233
>PF13454 NAD_binding_9: FAD-NAD(P)-binding
Probab=98.17 E-value=7.3e-06 Score=76.18 Aligned_cols=101 Identities=21% Similarity=0.464 Sum_probs=63.5
Q ss_pred EEECCCHHHHHHHHHHHhhc---CCCeEEEEcCCCCc---ccCcc-----cccccCcccc--------------------
Q psy8791 34 LVVGGGAAGCSMAAKFTSKL---GKGQVSIVEPTDDH---YYQPM-----FTLIGGGMKK-------------------- 82 (706)
Q Consensus 34 vIIGgG~aGl~aA~~L~~~~---~~~~Vtlie~~~~~---~~~p~-----~~~~~~~~~~-------------------- 82 (706)
+|||||++|++++.+|.+.. ...+|+|||+++.. .|.+. +...+....+
T Consensus 1 AIIG~G~~G~~~l~~L~~~~~~~~~~~I~vfd~~~~G~G~~~~~~~~~~~llN~~a~~~s~~~~~~~~~f~~Wl~~~~~~ 80 (156)
T PF13454_consen 1 AIIGGGPSGLAVLERLLRQADPKPPLEITVFDPSPFGAGGAYRPDQPPSHLLNTPADQMSLFPDDPGDDFVDWLRANGAD 80 (156)
T ss_pred CEECcCHHHHHHHHHHHHhcCCCCCCEEEEEcCCCccccccCCCCCChHHhhcccccccccccccCCCCHHHHHHhcCcc
Confidence 59999999999999999883 56899999996641 11110 0000000000
Q ss_pred ----Cc-ccccc-------cc----ccc---CCC--cEEEEceeEEEEcCCC--EEEeCCCeEEEecEEEEcccc
Q psy8791 83 ----LS-DSRRP-------MK----SVL---PSG--ATWVKDKIVSFDPENN--RVRTQAGSEISYEYMIVASGI 134 (706)
Q Consensus 83 ----~~-~~~~~-------~~----~~~---~~~--v~~i~~~v~~id~~~~--~v~~~~g~~~~yd~lviAtG~ 134 (706)
.. ....| +. .+. +.+ ++++..+|++|+.... .+.+.+|..+.+|.||+|||-
T Consensus 81 ~~~~~~~~~f~pR~~~G~YL~~~~~~~~~~~~~~i~v~~~~~~V~~i~~~~~~~~v~~~~g~~~~~d~VvLa~Gh 155 (156)
T PF13454_consen 81 EAEEIDPDDFPPRALFGEYLRDRFDRLLARLPAGITVRHVRAEVVDIRRDDDGYRVVTADGQSIRADAVVLATGH 155 (156)
T ss_pred cccccccccCCCHHHHHHHHHHHHHHHHHhhcCCcEEEEEeeEEEEEEEcCCcEEEEECCCCEEEeCEEEECCCC
Confidence 00 00000 11 111 123 5567789999988765 477789999999999999994
No 234
>PRK09897 hypothetical protein; Provisional
Probab=98.16 E-value=7.8e-06 Score=90.57 Aligned_cols=38 Identities=24% Similarity=0.347 Sum_probs=32.6
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
|++|+|||||++|+++|.+|.+.....+|+|||++...
T Consensus 1 m~~IAIIGgGp~Gl~~a~~L~~~~~~l~V~lfEp~~~~ 38 (534)
T PRK09897 1 MKKIAIVGAGPTGIYTFFSLLQQQTPLSISIFEQADEA 38 (534)
T ss_pred CCeEEEECCcHHHHHHHHHHHhcCCCCcEEEEecCCCC
Confidence 56899999999999999999886545799999996643
No 235
>COG3075 GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]
Probab=98.15 E-value=2.9e-05 Score=77.29 Aligned_cols=136 Identities=9% Similarity=-0.046 Sum_probs=86.3
Q ss_pred EEEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceE--EeecEEEECCCCCchh-h---
Q psy8791 253 LTYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTER--LPYAIMHVTPPMGPVP-E--- 326 (706)
Q Consensus 253 v~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~--i~~D~vI~a~G~~~~~-~--- 326 (706)
+..+-..|.-+..-++.+.+...+++.|.-++.|.+|...+-.+++|+...+.+... +.+|..|+|+|.--.. .
T Consensus 245 l~elPtlPPSllGiRl~~~L~~~f~~~Gg~~m~Gd~V~~a~~~~~~v~~i~trn~~diP~~a~~~VLAsGsffskGLvae 324 (421)
T COG3075 245 LFELPTLPPSLLGIRLHNQLQRQFEQLGGLWMPGDEVKKATCKGGRVTEIYTRNHADIPLRADFYVLASGSFFSKGLVAE 324 (421)
T ss_pred eeecCCCCcchhhhhHHHHHHHHHHHcCceEecCCceeeeeeeCCeEEEEEecccccCCCChhHeeeeccccccccchhh
Confidence 444433332222356888999999999999999999999988777777666656555 4589999999854221 1
Q ss_pred -------hhcCCC-CCCC-----------------CceeeCccccccCC----CCCEEEccccCCCCCCc----hHHHHH
Q psy8791 327 -------LATSRL-VDQS-----------------GYVNVDKATLQHVK----YSNVFAIGDCSNLPTSK----TAAAVA 373 (706)
Q Consensus 327 -------~~~~~l-~~~~-----------------G~i~vd~~~l~~~~----~~~Ifa~GD~~~~~~~~----~~~~a~ 373 (706)
+-.+.+ .+++ =.+.+|+ +++... ..|+||+|-+....+|- -...+.
T Consensus 325 ~d~I~EPIf~ldi~~~~dR~~W~~~~ffapqp~~qfGV~tD~-~lrp~~~g~~~eNL~aiGavlgGfdpi~egcGsGVai 403 (421)
T COG3075 325 RDKIYEPIFDLDILQTADRAEWYHSDFFAPQPYQQFGVTTDD-TLRPSRGGQTIENLYAIGAVLGGFDPIAEGCGSGVAI 403 (421)
T ss_pred hhhhhcchhhcccccCcchhhhhhccccCCChhHHhCccccc-ccCccccchHHHHHHHHHHHhcCCcHHHhcCCcchHH
Confidence 111111 0000 0145565 565332 46899999888776642 223566
Q ss_pred HhHHHHHHHHHHHHcC
Q psy8791 374 GQCKVVYDNLSAVMKN 389 (706)
Q Consensus 374 ~qg~~~a~ni~~~l~g 389 (706)
..|-.+|+.|++...+
T Consensus 404 vta~~aa~qi~~~~~~ 419 (421)
T COG3075 404 VTALHAAEQIAERAGG 419 (421)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 6777888888776544
No 236
>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]
Probab=98.13 E-value=1.5e-05 Score=86.28 Aligned_cols=77 Identities=10% Similarity=-0.003 Sum_probs=56.5
Q ss_pred EEEEeCCCcCCCchhHHHHHHHHHHhCC-ceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhcCC
Q psy8791 253 LTYCTGMGVLFPSPFYAEKIHDILIGRG-VDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELATSR 331 (706)
Q Consensus 253 v~l~~~~~~~~~~~~~~~~~~~~l~~~g-V~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~~ 331 (706)
--+..+....+.+..+...+.+.++++| ..+..++.+..++.++ ....+.+.+|+ +.+|.||+|+|.+.+......+
T Consensus 143 ~a~~~~~~~~~~p~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~-~~~~v~t~~g~-i~a~~vv~a~G~~~~~l~~~~~ 220 (387)
T COG0665 143 GGLFDPTGGHLDPRLLTRALAAAAEELGVVIIEGGTPVTSLERDG-RVVGVETDGGT-IEADKVVLAAGAWAGELAATLG 220 (387)
T ss_pred eeEecCCCCcCCHHHHHHHHHHHHHhcCCeEEEccceEEEEEecC-cEEEEEeCCcc-EEeCEEEEcCchHHHHHHHhcC
Confidence 4455666666666788899999999999 5566688898888752 24444455565 9999999999999887665444
No 237
>PRK05192 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Validated
Probab=98.13 E-value=5.8e-06 Score=91.65 Aligned_cols=36 Identities=25% Similarity=0.402 Sum_probs=32.5
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
+..+||||||||+||+.||..+++. +.+|++||++.
T Consensus 2 ~~~yDVIVVGGGpAG~eAA~~aAR~--G~kV~LiE~~~ 37 (618)
T PRK05192 2 PEEYDVIVVGGGHAGCEAALAAARM--GAKTLLLTHNL 37 (618)
T ss_pred CccceEEEECchHHHHHHHHHHHHc--CCcEEEEeccc
Confidence 3468999999999999999999998 89999999864
No 238
>PRK07190 hypothetical protein; Provisional
Probab=98.11 E-value=2.2e-05 Score=87.11 Aligned_cols=56 Identities=16% Similarity=0.231 Sum_probs=44.1
Q ss_pred hHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCc
Q psy8791 267 FYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGP 323 (706)
Q Consensus 267 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~ 323 (706)
.+.+.+.+.+++.|++++.+++|++++.+++.+.... .+|+++.++.||.|.|...
T Consensus 110 ~le~~L~~~~~~~Gv~v~~~~~v~~l~~~~~~v~v~~-~~g~~v~a~~vVgADG~~S 165 (487)
T PRK07190 110 YVEKLLDDKLKEAGAAVKRNTSVVNIELNQAGCLTTL-SNGERIQSRYVIGADGSRS 165 (487)
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCeeEEEE-CCCcEEEeCEEEECCCCCH
Confidence 4556667778889999999999999987665555433 4677999999999999864
No 239
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=98.11 E-value=1.3e-05 Score=85.41 Aligned_cols=59 Identities=15% Similarity=0.239 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEE--EEeCCCc--eEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAV--FKSEDKT--ERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~--~~~~~~g--~~i~~D~vI~a~G~~~~ 324 (706)
+.+.+.+.+.+++.|++++.++++..++.+...+. +....+| +++++|+||-|-|....
T Consensus 111 ~~l~~~L~~~~~~~gv~i~~~~~v~~~~~d~~~~~~~~~~~~~g~~~~i~adlvVgADG~~S~ 173 (356)
T PF01494_consen 111 PELDRALREEAEERGVDIRFGTRVVSIEQDDDGVTVVVRDGEDGEEETIEADLVVGADGAHSK 173 (356)
T ss_dssp HHHHHHHHHHHHHHTEEEEESEEEEEEEEETTEEEEEEEETCTCEEEEEEESEEEE-SGTT-H
T ss_pred HHHHHhhhhhhhhhhhhheeeeecccccccccccccccccccCCceeEEEEeeeecccCcccc
Confidence 45677788888889999999999998876655433 3333234 37899999999999875
No 240
>TIGR03364 HpnW_proposed FAD dependent oxidoreductase TIGR03364. This clade of FAD dependent oxidoreductases (members of the pfam01266 family) is syntenically associated with a family of proposed phosphonatase-like enzymes (TIGR03351) and is also found (less frequently) in association with phosphonate transporter components. A likely role for this enzyme involves the oxidative deamination of an aminophosphonate differring slightly from 2-aminoethylphosphonate, possibly 1-hydroxy-2-aminoethylphosphonate (see the comments for TIGR03351). Many members of the larger FAD dependent oxidoreductase family act as amino acid oxidative deaminases.
Probab=98.11 E-value=1.1e-05 Score=86.72 Aligned_cols=68 Identities=10% Similarity=0.078 Sum_probs=48.4
Q ss_pred EEeCCCcCCCchhHHHHHHHHHHhC-CceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhh
Q psy8791 255 YCTGMGVLFPSPFYAEKIHDILIGR-GVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELA 328 (706)
Q Consensus 255 l~~~~~~~~~~~~~~~~~~~~l~~~-gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~ 328 (706)
++.+....+.+..+...+.+.+.+. |++++.+++|.+++.+ .+. +++| ++.+|.||+|+|...+.++.
T Consensus 134 ~~~~~~g~v~p~~~~~~l~~~~~~~~Gv~i~~~t~V~~i~~~--~v~---t~~g-~i~a~~VV~A~G~~s~~l~~ 202 (365)
T TIGR03364 134 LHSPDELRVEPREAIPALAAYLAEQHGVEFHWNTAVTSVETG--TVR---TSRG-DVHADQVFVCPGADFETLFP 202 (365)
T ss_pred EEcCCCeeECHHHHHHHHHHHHHhcCCCEEEeCCeEEEEecC--eEE---eCCC-cEEeCEEEECCCCChhhhCc
Confidence 3444444444567777888877775 9999999999999753 233 2344 47899999999998776543
No 241
>PRK08163 salicylate hydroxylase; Provisional
Probab=98.10 E-value=2.9e-05 Score=84.32 Aligned_cols=57 Identities=9% Similarity=0.064 Sum_probs=44.1
Q ss_pred hHHHHHHHHHHhC-CceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 267 FYAEKIHDILIGR-GVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 267 ~~~~~~~~~l~~~-gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
.+.+.+.+.+.+. +++++.++.+++++.+++.+.+. ..+|+++.+|+||.|.|..+.
T Consensus 110 ~l~~~L~~~~~~~~~v~~~~~~~v~~i~~~~~~v~v~-~~~g~~~~ad~vV~AdG~~S~ 167 (396)
T PRK08163 110 DIHLSLLEAVLDHPLVEFRTSTHVVGIEQDGDGVTVF-DQQGNRWTGDALIGCDGVKSV 167 (396)
T ss_pred HHHHHHHHHHHhcCCcEEEeCCEEEEEecCCCceEEE-EcCCCEEecCEEEECCCcChH
Confidence 4566666666665 59999999999998766555543 346788999999999998875
No 242
>KOG2820|consensus
Probab=98.10 E-value=1.3e-05 Score=80.00 Aligned_cols=75 Identities=13% Similarity=-0.027 Sum_probs=55.6
Q ss_pred EEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEe--CCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhc
Q psy8791 255 YCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEID--LANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELAT 329 (706)
Q Consensus 255 l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~--~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~ 329 (706)
+++....+.......+.++..+++.|+.++.+..+..++ .+++..+.+.+.+|..+.++.+|+++|.+-+.++.+
T Consensus 142 ~~n~~gGvi~a~kslk~~~~~~~~~G~i~~dg~~v~~~~~~~e~~~~v~V~Tt~gs~Y~akkiI~t~GaWi~klL~~ 218 (399)
T KOG2820|consen 142 VVNESGGVINAAKSLKALQDKARELGVIFRDGEKVKFIKFVDEEGNHVSVQTTDGSIYHAKKIIFTVGAWINKLLPT 218 (399)
T ss_pred cccccccEeeHHHHHHHHHHHHHHcCeEEecCcceeeEeeccCCCceeEEEeccCCeeecceEEEEecHHHHhhcCc
Confidence 334333333346677788999999999999999988776 222223444556889999999999999999988876
No 243
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=98.10 E-value=5.7e-06 Score=93.88 Aligned_cols=37 Identities=30% Similarity=0.356 Sum_probs=32.4
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
...+|+|||+|++|+++|..|++. +.+|+++|+.+..
T Consensus 136 ~g~~V~VIGaGpaGL~aA~~l~~~--G~~V~v~e~~~~~ 172 (564)
T PRK12771 136 TGKRVAVIGGGPAGLSAAYHLRRM--GHAVTIFEAGPKL 172 (564)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCCC
Confidence 456899999999999999999987 7899999987653
No 244
>PF01134 GIDA: Glucose inhibited division protein A; InterPro: IPR002218 GidA is a tRNA modification enzyme found in bacteria and mitochondria. Though its precise molecular function of these proteins is not known, it is involved in the 5-carboxymethylaminomethyl modification of the wobble uridine base in some tRNAs [, ]. Sequence variations in the human mitochondrial protein may influence the severity of aminoglycoside-induced deafness []. This entry is found in GidA and related proteins, such as the methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase enzyme TrmFO.; GO: 0050660 flavin adenine dinucleotide binding, 0008033 tRNA processing; PDB: 3CES_C 3CP2_A 3G05_A 2CUL_A 3CP8_A 2ZXI_B 2ZXH_A 3G5S_A 3G5R_A 3G5Q_A.
Probab=98.10 E-value=3.9e-06 Score=88.17 Aligned_cols=39 Identities=26% Similarity=0.438 Sum_probs=32.9
Q ss_pred CCcEEEeceEEEEEcCCCe---EEcCCCcEEeeCEEEEecCc
Q psy8791 595 SGATWVKDKIVSFDPENNR---VRTQAGSEISYEYMIVASGI 633 (706)
Q Consensus 595 ~gv~~~~~~v~~id~~~~~---V~~~~g~~i~yd~lViAtGs 633 (706)
.++++++++|+.|..++.. |.+.+|+.+.+|.+|||||.
T Consensus 109 ~nl~i~~~~V~~l~~e~~~v~GV~~~~g~~~~a~~vVlaTGt 150 (392)
T PF01134_consen 109 PNLTIIQGEVTDLIVENGKVKGVVTKDGEEIEADAVVLATGT 150 (392)
T ss_dssp TTEEEEES-EEEEEECTTEEEEEEETTSEEEEECEEEE-TTT
T ss_pred CCeEEEEcccceEEecCCeEEEEEeCCCCEEecCEEEEeccc
Confidence 4899999999999887765 57889999999999999998
No 245
>PRK07233 hypothetical protein; Provisional
Probab=98.09 E-value=2.6e-05 Score=85.80 Aligned_cols=56 Identities=11% Similarity=0.149 Sum_probs=45.5
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCC
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPM 321 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~ 321 (706)
...+.+.+.+.+++.|++++++++|.+|+.+++.++.+. .+++++++|.||+|++.
T Consensus 197 ~~~l~~~l~~~l~~~g~~v~~~~~V~~i~~~~~~~~~~~-~~~~~~~ad~vI~a~p~ 252 (434)
T PRK07233 197 FATLIDALAEAIEARGGEIRLGTPVTSVVIDGGGVTGVE-VDGEEEDFDAVISTAPP 252 (434)
T ss_pred HHHHHHHHHHHHHhcCceEEeCCCeeEEEEcCCceEEEE-eCCceEECCEEEECCCH
Confidence 467888888999999999999999999987666554433 35678999999999875
No 246
>PRK08244 hypothetical protein; Provisional
Probab=98.08 E-value=1.8e-05 Score=88.53 Aligned_cols=59 Identities=8% Similarity=0.125 Sum_probs=44.5
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEe-CCCc-eEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKS-EDKT-ERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~-~~~g-~~i~~D~vI~a~G~~~~ 324 (706)
..+.+.+.+.+++.|++++.++++++++.+++.+++.. ..+| +++.+|+||-|.|.++.
T Consensus 100 ~~le~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~i~a~~vVgADG~~S~ 160 (493)
T PRK08244 100 AETEKVLEEHARSLGVEIFRGAEVLAVRQDGDGVEVVVRGPDGLRTLTSSYVVGADGAGSI 160 (493)
T ss_pred HHHHHHHHHHHHHcCCeEEeCCEEEEEEEcCCeEEEEEEeCCccEEEEeCEEEECCCCChH
Confidence 34566777778888999999999999976665554322 2245 57999999999999874
No 247
>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated
Probab=98.08 E-value=9.6e-06 Score=87.98 Aligned_cols=39 Identities=26% Similarity=0.325 Sum_probs=34.4
Q ss_pred ccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 464 FRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 464 ~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
++.++||+|||||++|+++|..|.+. +.+|+|||+.+..
T Consensus 3 ~~~~~dV~IvGaG~aGl~~A~~La~~--G~~v~liE~~~~~ 41 (392)
T PRK08773 3 RRSRRDAVIVGGGVVGAACALALADA--GLSVALVEGREPP 41 (392)
T ss_pred CCCCCCEEEECcCHHHHHHHHHHhcC--CCEEEEEeCCCCc
Confidence 45678999999999999999999987 8899999997643
No 248
>TIGR01790 carotene-cycl lycopene cyclase family protein. This family includes lycopene beta and epsilion cyclases (which form beta and delta carotene, respectively) from bacteria and plants as well as the plant capsanthin/capsorubin and neoxanthin cyclases which appear to have evolved from the plant lycopene cyclases. The plant lycopene epsilon cyclases also transform neurosporene to alpha zeacarotene.
Probab=98.06 E-value=1.1e-05 Score=87.31 Aligned_cols=41 Identities=22% Similarity=0.398 Sum_probs=33.5
Q ss_pred CCcEEEeceEEEEEcC-CC--eEEcCCCcEEeeCEEEEecCccc
Q psy8791 595 SGATWVKDKIVSFDPE-NN--RVRTQAGSEISYEYMIVASGIQM 635 (706)
Q Consensus 595 ~gv~~~~~~v~~id~~-~~--~V~~~~g~~i~yd~lViAtGs~~ 635 (706)
.|++++.++|+.+..+ .. .|++.+|+++.+|.||.|+|..+
T Consensus 98 ~gv~~~~~~v~~i~~~~~~~~~v~~~~g~~~~a~~VI~A~G~~s 141 (388)
T TIGR01790 98 GGVLWLERKAIHAEADGVALSTVYCAGGQRIQARLVIDARGFGP 141 (388)
T ss_pred cCcEEEccEEEEEEecCCceeEEEeCCCCEEEeCEEEECCCCch
Confidence 5888888899988765 22 46677888999999999999876
No 249
>PRK08132 FAD-dependent oxidoreductase; Provisional
Probab=98.06 E-value=4e-05 Score=86.90 Aligned_cols=58 Identities=3% Similarity=0.019 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHhC-CceEEcCCceEEEeCCCCEEEEE-eCCCce-EEeecEEEECCCCCch
Q psy8791 267 FYAEKIHDILIGR-GVDVHKGKALVEIDLANKEAVFK-SEDKTE-RLPYAIMHVTPPMGPV 324 (706)
Q Consensus 267 ~~~~~~~~~l~~~-gV~v~~~~~v~~i~~~~~~v~~~-~~~~g~-~i~~D~vI~a~G~~~~ 324 (706)
.+.+.+.+.+.+. |++++.++++++++.+++.+... ...+|+ ++.+|+||.|.|....
T Consensus 126 ~le~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~i~ad~vVgADG~~S~ 186 (547)
T PRK08132 126 YVEGYLVERAQALPNIDLRWKNKVTGLEQHDDGVTLTVETPDGPYTLEADWVIACDGARSP 186 (547)
T ss_pred HHHHHHHHHHHhCCCcEEEeCCEEEEEEEcCCEEEEEEECCCCcEEEEeCEEEECCCCCcH
Confidence 3455566666664 79999999999998766555432 222443 7999999999998875
No 250
>TIGR01988 Ubi-OHases Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family. This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4, ) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) maki
Probab=98.06 E-value=2e-05 Score=85.18 Aligned_cols=58 Identities=10% Similarity=0.061 Sum_probs=46.0
Q ss_pred hhHHHHHHHHHHhCC-ceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGRG-VDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~g-V~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
..+.+.+.+.+.+.| ++++.+++|++++.+++.+.+. .++|+++.+|+||.|.|....
T Consensus 106 ~~l~~~L~~~~~~~~~~~v~~~~~v~~i~~~~~~~~v~-~~~g~~~~~~~vi~adG~~S~ 164 (385)
T TIGR01988 106 RVLQQALWERLQEYPNVTLLCPARVVELPRHSDHVELT-LDDGQQLRARLLVGADGANSK 164 (385)
T ss_pred HHHHHHHHHHHHhCCCcEEecCCeEEEEEecCCeeEEE-ECCCCEEEeeEEEEeCCCCCH
Confidence 456677777777877 9999999999998766656543 457888999999999998654
No 251
>PRK07333 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional
Probab=98.06 E-value=8.3e-06 Score=88.86 Aligned_cols=37 Identities=19% Similarity=0.344 Sum_probs=33.0
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
|+||+|||||++|+++|..|++..++.+|+|+|+.+.
T Consensus 1 ~~dv~IvGaG~aGl~~A~~L~~~g~g~~v~liE~~~~ 37 (403)
T PRK07333 1 QCDVVIAGGGYVGLALAVALKQAAPHLPVTVVDAAPA 37 (403)
T ss_pred CCCEEEECccHHHHHHHHHHhcCCCCCEEEEEeCCCc
Confidence 6799999999999999999998744589999999764
No 252
>PRK05192 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Validated
Probab=98.06 E-value=1e-05 Score=89.69 Aligned_cols=105 Identities=21% Similarity=0.299 Sum_probs=68.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcc-c---Cccccc-----------ccCccc----cCc-----
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHY-Y---QPMFTL-----------IGGGMK----KLS----- 84 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~-~---~p~~~~-----------~~~~~~----~~~----- 84 (706)
..+||||||||+||+.||..+++. |.+|+|||++.... . .|.... ..++.. +..
T Consensus 3 ~~yDVIVVGGGpAG~eAA~~aAR~--G~kV~LiE~~~d~iG~m~CnpsiGG~akg~lvrEidalGg~~g~~~d~~giq~r 80 (618)
T PRK05192 3 EEYDVIVVGGGHAGCEAALAAARM--GAKTLLLTHNLDTIGQMSCNPAIGGIAKGHLVREIDALGGEMGKAIDKTGIQFR 80 (618)
T ss_pred ccceEEEECchHHHHHHHHHHHHc--CCcEEEEecccccccccCCccccccchhhHHHHHHHhcCCHHHHHHhhccCcee
Confidence 358999999999999999999998 99999999984211 1 111100 011000 000
Q ss_pred --------cc-----ccc---ccc-----ccC-CCcEEEEceeEEEEcCCCE---EEeCCCeEEEecEEEEccccc
Q psy8791 85 --------DS-----RRP---MKS-----VLP-SGATWVKDKIVSFDPENNR---VRTQAGSEISYEYMIVASGIQ 135 (706)
Q Consensus 85 --------~~-----~~~---~~~-----~~~-~~v~~i~~~v~~id~~~~~---v~~~~g~~~~yd~lviAtG~~ 135 (706)
.+ ..+ +.. +.. .++++++++|+++..+++. |.+.+|..+.++.+|+|||..
T Consensus 81 ~ln~skGpAV~s~RaQiDr~ly~kaL~e~L~~~~nV~I~q~~V~~Li~e~grV~GV~t~dG~~I~Ak~VIlATGTF 156 (618)
T PRK05192 81 MLNTSKGPAVRALRAQADRKLYRAAMREILENQPNLDLFQGEVEDLIVENGRVVGVVTQDGLEFRAKAVVLTTGTF 156 (618)
T ss_pred ecccCCCCceeCcHHhcCHHHHHHHHHHHHHcCCCcEEEEeEEEEEEecCCEEEEEEECCCCEEECCEEEEeeCcc
Confidence 00 000 011 112 4788888999988765553 567788899999999999964
No 253
>COG1232 HemY Protoporphyrinogen oxidase [Coenzyme metabolism]
Probab=98.05 E-value=2.4e-05 Score=83.94 Aligned_cols=36 Identities=31% Similarity=0.480 Sum_probs=33.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
++|+|||||.+||+||++|+++.|.++|+|+|+.++
T Consensus 1 ~~i~IiG~GiaGLsaAy~L~k~~p~~~i~lfE~~~r 36 (444)
T COG1232 1 MKIAIIGGGIAGLSAAYRLQKAGPDVEVTLFEADDR 36 (444)
T ss_pred CeEEEECCcHHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 479999999999999999999977799999999986
No 254
>PRK06183 mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Validated
Probab=98.05 E-value=4.9e-05 Score=85.91 Aligned_cols=59 Identities=12% Similarity=0.095 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHHhC-CceEEcCCceEEEeCCCCEEEEEeCC-Cc--eEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGR-GVDVHKGKALVEIDLANKEAVFKSED-KT--ERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~-gV~v~~~~~v~~i~~~~~~v~~~~~~-~g--~~i~~D~vI~a~G~~~~ 324 (706)
+.+.+.+.+.+.+. |++++.++++++++.+++.+++...+ +| +++.+|+||-|.|....
T Consensus 113 ~~le~~L~~~~~~~~gv~v~~g~~v~~i~~~~~~v~v~~~~~~G~~~~i~ad~vVgADG~~S~ 175 (538)
T PRK06183 113 PLLEAVLRAGLARFPHVRVRFGHEVTALTQDDDGVTVTLTDADGQRETVRARYVVGCDGANSF 175 (538)
T ss_pred HHHHHHHHHHHHhCCCcEEEcCCEEEEEEEcCCeEEEEEEcCCCCEEEEEEEEEEecCCCchh
Confidence 34555666666664 99999999999998776666543322 45 57999999999998765
No 255
>TIGR01789 lycopene_cycl lycopene cyclase. This model represents a family of bacterial lycopene cyclases catalyzing the transformation of lycopene to carotene. These enzymes are found in a limited spectrum of alpha and gamma proteobacteria as well as Flavobacterium.
Probab=98.05 E-value=2.4e-05 Score=83.67 Aligned_cols=102 Identities=20% Similarity=0.317 Sum_probs=62.6
Q ss_pred cEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc----ccCcccccccCc-----c-----ccCcc-----------c
Q psy8791 32 KLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH----YYQPMFTLIGGG-----M-----KKLSD-----------S 86 (706)
Q Consensus 32 ~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~----~~~p~~~~~~~~-----~-----~~~~~-----------~ 86 (706)
||+|||||+||+++|..|++..++.+|+|+|+.+.. .+. .+..-... . ..... .
T Consensus 1 DviIvGaG~AGl~lA~~L~~~~~g~~V~lle~~~~~~~~~tw~-~~~~~~~~~~~~~~~~~v~~~W~~~~v~~~~~~~~l 79 (370)
T TIGR01789 1 DCIIVGGGLAGGLIALRLQRARPDFRIRVIEAGRTIGGNHTWS-FFDSDLSDAQHAWLADLVQTDWPGYEVRFPKYRRKL 79 (370)
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCcccce-ecccccchhhhhhhhhhheEeCCCCEEECcchhhhc
Confidence 699999999999999999986568999999998731 111 01000000 0 00000 0
Q ss_pred ccccc--------cc-c---CCCcEEEEceeEEEEcCCCEEEeCCCeEEEecEEEEccccccc
Q psy8791 87 RRPMK--------SV-L---PSGATWVKDKIVSFDPENNRVRTQAGSEISYEYMIVASGIQMY 137 (706)
Q Consensus 87 ~~~~~--------~~-~---~~~v~~i~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~ 137 (706)
..++. +. . ..++.+ .++|++++++ .|++.+|.++.+|.||-|.|..+.
T Consensus 80 ~~~Y~~I~r~~f~~~l~~~l~~~i~~-~~~V~~v~~~--~v~l~dg~~~~A~~VI~A~G~~s~ 139 (370)
T TIGR01789 80 KTAYRSMTSTRFHEGLLQAFPEGVIL-GRKAVGLDAD--GVDLAPGTRINARSVIDCRGFKPS 139 (370)
T ss_pred CCCceEEEHHHHHHHHHHhhcccEEe-cCEEEEEeCC--EEEECCCCEEEeeEEEECCCCCCC
Confidence 00111 11 0 122222 4788888654 367788889999999999997653
No 256
>PLN00093 geranylgeranyl diphosphate reductase; Provisional
Probab=98.05 E-value=1.8e-05 Score=86.73 Aligned_cols=38 Identities=26% Similarity=0.417 Sum_probs=34.0
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 27 SSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 27 ~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
+..++||+|||||+||++||..|++. |++|+|+|++..
T Consensus 36 ~~~~~DViIVGaGPAG~~aA~~LA~~--G~~VlllEr~~~ 73 (450)
T PLN00093 36 SGRKLRVAVIGGGPAGACAAETLAKG--GIETFLIERKLD 73 (450)
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCC
Confidence 34568999999999999999999999 999999999853
No 257
>PRK07608 ubiquinone biosynthesis hydroxylase family protein; Provisional
Probab=98.04 E-value=1.2e-05 Score=87.18 Aligned_cols=37 Identities=27% Similarity=0.486 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
.+++|+|||||+||+++|..|++. |++|+|+|+++..
T Consensus 4 ~~~dv~IvGgG~aGl~~A~~L~~~--G~~v~v~E~~~~~ 40 (388)
T PRK07608 4 MKFDVVVVGGGLVGASLALALAQS--GLRVALLAPRAPP 40 (388)
T ss_pred ccCCEEEECcCHHHHHHHHHHHhC--CCeEEEEecCCCc
Confidence 356999999999999999999998 8999999998763
No 258
>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
Probab=98.02 E-value=3.5e-05 Score=83.58 Aligned_cols=57 Identities=7% Similarity=0.022 Sum_probs=43.8
Q ss_pred hHHHHHHHHHHhC-CceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 267 FYAEKIHDILIGR-GVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 267 ~~~~~~~~~l~~~-gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
.+.+.+.+.+.+. |++++.+++++++..+++.+.+ ..++|+++.+|+||.|.|....
T Consensus 113 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v-~~~~g~~~~a~~vI~AdG~~S~ 170 (391)
T PRK08020 113 VLQLALWQALEAHPNVTLRCPASLQALQRDDDGWEL-TLADGEEIQAKLVIGADGANSQ 170 (391)
T ss_pred HHHHHHHHHHHcCCCcEEEcCCeeEEEEEcCCeEEE-EECCCCEEEeCEEEEeCCCCch
Confidence 4556666667766 9999999999999765554443 3346778999999999999875
No 259
>COG0029 NadB Aspartate oxidase [Coenzyme metabolism]
Probab=98.02 E-value=6.4e-05 Score=79.45 Aligned_cols=32 Identities=22% Similarity=0.389 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 32 KLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 32 ~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
+|+|||+|.|||++|..|.+. ++|+|+.|++.
T Consensus 9 dV~IiGsG~AGL~~AL~L~~~---~~V~vltk~~~ 40 (518)
T COG0029 9 DVLIIGSGLAGLTAALSLAPS---FRVTVLTKGPL 40 (518)
T ss_pred cEEEECCcHHHHHHHHhCCCC---CcEEEEeCCCC
Confidence 899999999999999999986 89999998764
No 260
>PRK06184 hypothetical protein; Provisional
Probab=98.00 E-value=1.6e-05 Score=89.05 Aligned_cols=37 Identities=19% Similarity=0.375 Sum_probs=33.5
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.+++|+|||||++|+++|..|++. +.+|+|||+.+..
T Consensus 2 ~~~dVlIVGaGpaGl~~A~~La~~--Gi~v~viE~~~~~ 38 (502)
T PRK06184 2 TTTDVLIVGAGPTGLTLAIELARR--GVSFRLIEKAPEP 38 (502)
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCCCC
Confidence 467999999999999999999998 8999999997654
No 261
>PRK07236 hypothetical protein; Provisional
Probab=98.00 E-value=2.4e-05 Score=84.63 Aligned_cols=36 Identities=19% Similarity=0.262 Sum_probs=33.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..++|+|||||++||++|..|++. |++|+|+|+.+.
T Consensus 5 ~~~~ViIVGaG~aGl~~A~~L~~~--G~~v~v~E~~~~ 40 (386)
T PRK07236 5 SGPRAVVIGGSLGGLFAALLLRRA--GWDVDVFERSPT 40 (386)
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC--CCCEEEEecCCC
Confidence 457999999999999999999998 899999999874
No 262
>PTZ00188 adrenodoxin reductase; Provisional
Probab=98.00 E-value=1.2e-05 Score=86.64 Aligned_cols=38 Identities=18% Similarity=0.377 Sum_probs=31.4
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
+.++|+|||||+||++||..+.+.. +.+|+|+|+.+.+
T Consensus 38 ~~krVAIVGaGPAGlyaA~~Ll~~~-g~~VtlfEk~p~p 75 (506)
T PTZ00188 38 KPFKVGIIGAGPSALYCCKHLLKHE-RVKVDIFEKLPNP 75 (506)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHhc-CCeEEEEecCCCC
Confidence 3568999999999999999876432 7899999997754
No 263
>TIGR02023 BchP-ChlP geranylgeranyl reductase. This model represents a group of geranylgeranyl reductases specific for the biosyntheses of bacteriochlorophyll and chlorophyll. It is unclear whether the processes of isoprenoid ligation to the chlorin ring and reduction of the geranylgeranyl chain to a phytyl chain are necessarily ordered the same way in all species (see introduction to ).
Probab=97.99 E-value=2.5e-05 Score=84.50 Aligned_cols=32 Identities=22% Similarity=0.448 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPT 64 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~ 64 (706)
+||+|||||+||++||+.|++. |++|+|+|++
T Consensus 1 yDVvIVGaGpAG~~aA~~La~~--G~~V~l~E~~ 32 (388)
T TIGR02023 1 YDVAVIGGGPSGATAAETLARA--GIETILLERA 32 (388)
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCcEEEEECC
Confidence 5899999999999999999998 8999999998
No 264
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=97.99 E-value=8e-06 Score=63.78 Aligned_cols=30 Identities=23% Similarity=0.429 Sum_probs=27.9
Q ss_pred EECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 35 VVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 35 IIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
|||||++||++|+.|++. +++|+|+|+++.
T Consensus 1 IiGaG~sGl~aA~~L~~~--g~~v~v~E~~~~ 30 (68)
T PF13450_consen 1 IIGAGISGLAAAYYLAKA--GYRVTVFEKNDR 30 (68)
T ss_dssp EES-SHHHHHHHHHHHHT--TSEEEEEESSSS
T ss_pred CEeeCHHHHHHHHHHHHC--CCcEEEEecCcc
Confidence 899999999999999999 899999999996
No 265
>PRK05868 hypothetical protein; Validated
Probab=97.99 E-value=3.5e-05 Score=82.78 Aligned_cols=35 Identities=23% Similarity=0.231 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
+++|+|||||++|+++|..|+++ |++|+|||+.+.
T Consensus 1 ~~~V~IvGgG~aGl~~A~~L~~~--G~~v~viE~~~~ 35 (372)
T PRK05868 1 MKTVVVSGASVAGTAAAYWLGRH--GYSVTMVERHPG 35 (372)
T ss_pred CCeEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCC
Confidence 46899999999999999999998 899999999865
No 266
>PRK06834 hypothetical protein; Provisional
Probab=97.98 E-value=1.8e-05 Score=87.86 Aligned_cols=37 Identities=24% Similarity=0.394 Sum_probs=33.0
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..+||+|||||++|+++|..|++. +.+|+|||+.+..
T Consensus 2 ~~~dVlIVGaGp~Gl~lA~~La~~--G~~v~vlEr~~~~ 38 (488)
T PRK06834 2 TEHAVVIAGGGPTGLMLAGELALA--GVDVAIVERRPNQ 38 (488)
T ss_pred CcceEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCCC
Confidence 347999999999999999999998 8999999987653
No 267
>PRK06753 hypothetical protein; Provisional
Probab=97.97 E-value=2.1e-05 Score=84.67 Aligned_cols=34 Identities=24% Similarity=0.475 Sum_probs=31.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
++|+|||||+||+++|..|++. |++|+|+|+++.
T Consensus 1 ~~V~IvGgG~aGl~~A~~L~~~--g~~v~v~E~~~~ 34 (373)
T PRK06753 1 MKIAIIGAGIGGLTAAALLQEQ--GHEVKVFEKNES 34 (373)
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCc
Confidence 4799999999999999999998 999999999875
No 268
>COG0493 GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only]
Probab=97.97 E-value=6.4e-06 Score=89.21 Aligned_cols=35 Identities=23% Similarity=0.332 Sum_probs=31.7
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
-++|.|||||+||+++|..|.+. ++.|+++|+.+.
T Consensus 123 g~~VaviGaGPAGl~~a~~L~~~--G~~Vtv~e~~~~ 157 (457)
T COG0493 123 GKKVAVIGAGPAGLAAADDLSRA--GHDVTVFERVAL 157 (457)
T ss_pred CCEEEEECCCchHhhhHHHHHhC--CCeEEEeCCcCC
Confidence 37899999999999999999998 899999998554
No 269
>COG2907 Predicted NAD/FAD-binding protein [General function prediction only]
Probab=97.96 E-value=7.6e-05 Score=74.91 Aligned_cols=37 Identities=24% Similarity=0.323 Sum_probs=33.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHY 68 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~ 68 (706)
.+++|.|||+|.+||+||+.|.++ ++|||+|.+++..
T Consensus 7 ~r~~IAVIGsGisGLSAA~~Ls~r---hdVTLfEA~~rlG 43 (447)
T COG2907 7 PRRKIAVIGSGISGLSAAWLLSRR---HDVTLFEADRRLG 43 (447)
T ss_pred CCcceEEEcccchhhhhHHhhhcc---cceEEEecccccc
Confidence 467999999999999999999998 8999999998744
No 270
>PF04820 Trp_halogenase: Tryptophan halogenase; InterPro: IPR006905 Tryptophan halogenase catalyses the chlorination of tryptophan to form 7-chlorotryptophan. This is the first step in the biosynthesis of pyrrolnitrin, an antibiotic with broad-spectrum anti-fungal activity. Tryptophan halogenase is NADH-dependent [].; PDB: 2PYX_B 2OAL_B 2E4G_A 2OAM_A 2OA1_B 2O9Z_A 3I3L_A 2AQJ_A 2ARD_A 2JKC_A ....
Probab=97.96 E-value=2.5e-05 Score=85.72 Aligned_cols=58 Identities=14% Similarity=0.202 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeC-CCCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDL-ANKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~-~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
..+.+.+.+..+++||+++.++ |+.+.. +++.+..+.+++|+++.+|++|=|+|++..
T Consensus 154 ~~fd~~L~~~A~~~Gv~~~~g~-V~~v~~~~~g~i~~v~~~~g~~i~ad~~IDASG~~s~ 212 (454)
T PF04820_consen 154 AKFDQFLRRHAEERGVEVIEGT-VVDVELDEDGRITAVRLDDGRTIEADFFIDASGRRSL 212 (454)
T ss_dssp HHHHHHHHHHHHHTT-EEEET--EEEEEE-TTSEEEEEEETTSEEEEESEEEE-SGGG-C
T ss_pred HHHHHHHHHHHhcCCCEEEeCE-EEEEEEcCCCCEEEEEECCCCEEEEeEEEECCCccch
Confidence 5788889999999999999985 555543 345566666778999999999999999764
No 271
>PRK10015 oxidoreductase; Provisional
Probab=97.96 E-value=4.2e-05 Score=83.61 Aligned_cols=38 Identities=29% Similarity=0.309 Sum_probs=34.1
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHY 505 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~ 505 (706)
.++||+|||||+||++||..|++. +.+|+|||+.+...
T Consensus 4 ~~~DViIVGgGpAG~~aA~~LA~~--G~~VlliEr~~~~g 41 (429)
T PRK10015 4 DKFDAIVVGAGVAGSVAALVMARA--GLDVLVIERGDSAG 41 (429)
T ss_pred cccCEEEECcCHHHHHHHHHHHhC--CCeEEEEecCCCCC
Confidence 358999999999999999999997 89999999987654
No 272
>PRK06834 hypothetical protein; Provisional
Probab=97.95 E-value=3e-05 Score=86.15 Aligned_cols=108 Identities=17% Similarity=0.279 Sum_probs=67.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCccc-Cc---ccc--------------ccc--------Cc----
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYY-QP---MFT--------------LIG--------GG---- 79 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~-~p---~~~--------------~~~--------~~---- 79 (706)
..+|+|||||++|+++|..|+++ |++|+|||+.+.... .+ .+. .+. .+
T Consensus 3 ~~dVlIVGaGp~Gl~lA~~La~~--G~~v~vlEr~~~~~~~~~Ra~~l~~~s~~~L~~lGl~~~l~~~~~~~~~~~~~~~ 80 (488)
T PRK06834 3 EHAVVIAGGGPTGLMLAGELALA--GVDVAIVERRPNQELVGSRAGGLHARTLEVLDQRGIADRFLAQGQVAQVTGFAAT 80 (488)
T ss_pred cceEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCCCCCCCcceeeECHHHHHHHHHcCcHHHHHhcCCccccceeeeE
Confidence 47999999999999999999999 999999998864211 10 000 000 00
Q ss_pred cccCcccc--ccc---------ccc-----cCCCcEEEE-ceeEEEEcCCC--EEEeCCCeEEEecEEEEccccccccC
Q psy8791 80 MKKLSDSR--RPM---------KSV-----LPSGATWVK-DKIVSFDPENN--RVRTQAGSEISYEYMIVASGIQMYYD 139 (706)
Q Consensus 80 ~~~~~~~~--~~~---------~~~-----~~~~v~~i~-~~v~~id~~~~--~v~~~~g~~~~yd~lviAtG~~~~~~ 139 (706)
........ .++ ..+ ...++++.. .+|++++.+.. .+++.+|.++.+|+||.|.|......
T Consensus 81 ~~~~~~~~~~~~~~~~i~q~~le~~L~~~l~~~gv~i~~~~~v~~v~~~~~~v~v~~~~g~~i~a~~vVgADG~~S~vR 159 (488)
T PRK06834 81 RLDISDFPTRHNYGLALWQNHIERILAEWVGELGVPIYRGREVTGFAQDDTGVDVELSDGRTLRAQYLVGCDGGRSLVR 159 (488)
T ss_pred ecccccCCCCCCccccccHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCCCCCcH
Confidence 00000000 000 011 123667665 57888876655 45556777899999999999876543
No 273
>PRK10157 putative oxidoreductase FixC; Provisional
Probab=97.94 E-value=2.6e-05 Score=85.31 Aligned_cols=38 Identities=26% Similarity=0.378 Sum_probs=34.0
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHY 505 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~ 505 (706)
.++||+|||||+||++||..|++. +.+|+|||+.+...
T Consensus 4 ~~~DViIVGaGpAG~~aA~~La~~--G~~V~llEr~~~~g 41 (428)
T PRK10157 4 DIFDAIIVGAGLAGSVAALVLARE--GAQVLVIERGNSAG 41 (428)
T ss_pred ccCcEEEECcCHHHHHHHHHHHhC--CCeEEEEEcCCCCC
Confidence 368999999999999999999988 89999999977644
No 274
>PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Probab=97.93 E-value=2.5e-05 Score=85.15 Aligned_cols=34 Identities=24% Similarity=0.430 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
.++|+|||||++|+++|..|+++ |++|+|||+.+
T Consensus 2 ~~dV~IVGaG~aGl~~A~~L~~~--G~~v~viE~~~ 35 (405)
T PRK05714 2 RADLLIVGAGMVGSALALALQGS--GLEVLLLDGGP 35 (405)
T ss_pred CccEEEECccHHHHHHHHHHhcC--CCEEEEEcCCC
Confidence 36899999999999999999998 89999999876
No 275
>PRK05868 hypothetical protein; Validated
Probab=97.93 E-value=3.9e-05 Score=82.40 Aligned_cols=36 Identities=25% Similarity=0.205 Sum_probs=32.8
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
|++|+|||||++|+++|..|++. +.+|+|||+.+..
T Consensus 1 ~~~V~IvGgG~aGl~~A~~L~~~--G~~v~viE~~~~~ 36 (372)
T PRK05868 1 MKTVVVSGASVAGTAAAYWLGRH--GYSVTMVERHPGL 36 (372)
T ss_pred CCeEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Confidence 67899999999999999999987 8999999997654
No 276
>PRK07045 putative monooxygenase; Reviewed
Probab=97.92 E-value=2.9e-05 Score=84.06 Aligned_cols=37 Identities=24% Similarity=0.467 Sum_probs=33.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
.+++|+|||||+||+++|..|++. |++|+|+|+.+..
T Consensus 4 ~~~~V~IiGgGpaGl~~A~~L~~~--G~~v~v~E~~~~~ 40 (388)
T PRK07045 4 NPVDVLINGSGIAGVALAHLLGAR--GHSVTVVERAARN 40 (388)
T ss_pred ceeEEEEECCcHHHHHHHHHHHhc--CCcEEEEeCCCcc
Confidence 457999999999999999999998 9999999988753
No 277
>TIGR02032 GG-red-SF geranylgeranyl reductase family. This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates.
Probab=97.92 E-value=2.5e-05 Score=81.03 Aligned_cols=35 Identities=29% Similarity=0.424 Sum_probs=31.9
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
+||+|||||+||+++|..|++. +.+|+|||+.+..
T Consensus 1 ~dv~IiGaG~aGl~~A~~l~~~--g~~v~vie~~~~~ 35 (295)
T TIGR02032 1 YDVVVVGAGPAGASAAYRLADK--GLRVLLLEKKSFP 35 (295)
T ss_pred CCEEEECCCHHHHHHHHHHHHC--CCeEEEEeccCCC
Confidence 5899999999999999999987 8899999997754
No 278
>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Probab=97.92 E-value=3.5e-05 Score=83.33 Aligned_cols=35 Identities=29% Similarity=0.604 Sum_probs=31.9
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
+++||+|||||++|+++|..|++. +.+|+|||+.+
T Consensus 2 ~~~dv~IvGgG~aGl~~A~~L~~~--G~~v~l~E~~~ 36 (384)
T PRK08849 2 NKYDIAVVGGGMVGAATALGFAKQ--GRSVAVIEGGE 36 (384)
T ss_pred CcccEEEECcCHHHHHHHHHHHhC--CCcEEEEcCCC
Confidence 457999999999999999999987 89999999865
No 279
>PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional
Probab=97.92 E-value=1.9e-05 Score=85.63 Aligned_cols=37 Identities=27% Similarity=0.528 Sum_probs=33.0
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
|+.+||+|||||++|+++|..|++. +.+|+|||+.+.
T Consensus 5 ~~~~dViIVGaG~~Gl~~A~~L~~~--G~~v~liE~~~~ 41 (388)
T PRK07494 5 KEHTDIAVIGGGPAGLAAAIALARA--GASVALVAPEPP 41 (388)
T ss_pred CCCCCEEEECcCHHHHHHHHHHhcC--CCeEEEEeCCCC
Confidence 3457999999999999999999987 899999999764
No 280
>COG0644 FixC Dehydrogenases (flavoproteins) [Energy production and conversion]
Probab=97.92 E-value=3.7e-05 Score=83.31 Aligned_cols=40 Identities=25% Similarity=0.403 Sum_probs=35.6
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCc
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQP 508 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~ 508 (706)
+|||+|||||+||.+||+.|++. +.+|+|+|+.+.+.+.+
T Consensus 3 ~~DVvIVGaGPAGs~aA~~la~~--G~~VlvlEk~~~~G~k~ 42 (396)
T COG0644 3 EYDVVIVGAGPAGSSAARRLAKA--GLDVLVLEKGSEPGAKP 42 (396)
T ss_pred eeeEEEECCchHHHHHHHHHHHc--CCeEEEEecCCCCCCCc
Confidence 68999999999999999999998 69999999987766443
No 281
>PLN02697 lycopene epsilon cyclase
Probab=97.91 E-value=2.1e-05 Score=87.21 Aligned_cols=34 Identities=29% Similarity=0.435 Sum_probs=31.1
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPT 501 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~ 501 (706)
.++||+|||||+||+++|..+.+. +.+|+|||+.
T Consensus 107 ~~~DVvIVGaGPAGLalA~~Lak~--Gl~V~LIe~~ 140 (529)
T PLN02697 107 GTLDLVVIGCGPAGLALAAESAKL--GLNVGLIGPD 140 (529)
T ss_pred CcccEEEECcCHHHHHHHHHHHhC--CCcEEEecCc
Confidence 468999999999999999999987 8999999974
No 282
>PTZ00363 rab-GDP dissociation inhibitor; Provisional
Probab=97.91 E-value=8e-05 Score=80.95 Aligned_cols=60 Identities=8% Similarity=-0.026 Sum_probs=49.6
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCCC-CEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLAN-KEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~-~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
...+.+.+.+.++..|.+++++++|++|..++ +.+..+.+.+|+++.|+.||..+...|+
T Consensus 231 ~g~L~qal~r~~a~~Gg~~~L~~~V~~I~~~~~g~~~~V~~~~Ge~i~a~~VV~~~s~~p~ 291 (443)
T PTZ00363 231 LGGLPQAFSRLCAIYGGTYMLNTPVDEVVFDENGKVCGVKSEGGEVAKCKLVICDPSYFPD 291 (443)
T ss_pred HHHHHHHHHHHHHHcCcEEEcCCeEEEEEEcCCCeEEEEEECCCcEEECCEEEECcccccc
Confidence 46788888888999999999999999997543 4455555668899999999999888876
No 283
>PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional
Probab=97.91 E-value=2.7e-05 Score=84.39 Aligned_cols=36 Identities=28% Similarity=0.518 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..+||+|||||++|+++|..|++. |++|+|||+.+.
T Consensus 6 ~~~dViIVGaG~~Gl~~A~~L~~~--G~~v~liE~~~~ 41 (388)
T PRK07494 6 EHTDIAVIGGGPAGLAAAIALARA--GASVALVAPEPP 41 (388)
T ss_pred CCCCEEEECcCHHHHHHHHHHhcC--CCeEEEEeCCCC
Confidence 346899999999999999999998 899999999864
No 284
>PRK06185 hypothetical protein; Provisional
Probab=97.90 E-value=0.00013 Score=79.57 Aligned_cols=58 Identities=2% Similarity=-0.063 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHh-CCceEEcCCceEEEeCCCCEEE--EEeCCCc-eEEeecEEEECCCCCch
Q psy8791 267 FYAEKIHDILIG-RGVDVHKGKALVEIDLANKEAV--FKSEDKT-ERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 267 ~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~~v~--~~~~~~g-~~i~~D~vI~a~G~~~~ 324 (706)
.+.+.+.+.+.+ .|++++.++++.++..+++.+. ....++| .++.+|+||.|.|....
T Consensus 109 ~l~~~L~~~~~~~~~v~i~~~~~v~~~~~~~~~v~~v~~~~~~g~~~i~a~~vI~AdG~~S~ 170 (407)
T PRK06185 109 DFLDFLAEEASAYPNFTLRMGAEVTGLIEEGGRVTGVRARTPDGPGEIRADLVVGADGRHSR 170 (407)
T ss_pred HHHHHHHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEcCCCcEEEEeCEEEECCCCchH
Confidence 455566666655 4899999999999976665543 1223355 47999999999998764
No 285
>PRK07236 hypothetical protein; Provisional
Probab=97.90 E-value=3.4e-05 Score=83.45 Aligned_cols=38 Identities=18% Similarity=0.131 Sum_probs=33.8
Q ss_pred ccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 464 FRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 464 ~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
.|.+++|+|||||++|+++|..|++. +.+|+|+|+.+.
T Consensus 3 ~~~~~~ViIVGaG~aGl~~A~~L~~~--G~~v~v~E~~~~ 40 (386)
T PRK07236 3 HMSGPRAVVIGGSLGGLFAALLLRRA--GWDVDVFERSPT 40 (386)
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhC--CCCEEEEecCCC
Confidence 34567999999999999999999998 899999998764
No 286
>PRK09126 hypothetical protein; Provisional
Probab=97.89 E-value=6.2e-05 Score=81.68 Aligned_cols=35 Identities=29% Similarity=0.448 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
+++|+|||||++|+++|..|+++ |++|+|+|+.+.
T Consensus 3 ~~dviIvGgG~aGl~~A~~L~~~--G~~v~v~E~~~~ 37 (392)
T PRK09126 3 HSDIVVVGAGPAGLSFARSLAGS--GLKVTLIERQPL 37 (392)
T ss_pred cccEEEECcCHHHHHHHHHHHhC--CCcEEEEeCCCc
Confidence 47899999999999999999998 999999999864
No 287
>TIGR03219 salicylate_mono salicylate 1-monooxygenase. Members of this protein family are salicylate 1-monooxygenase, also called salicylate hydroxylase. This enzyme converts salicylate to catechol, which is a common intermediate in the degradation of a number of aromatic compounds (phenol, toluene, benzoate, etc.). The gene for this protein may occur in catechol degradation genes, such as those of the meta-cleavage pathway.
Probab=97.88 E-value=3.5e-05 Score=84.23 Aligned_cols=34 Identities=24% Similarity=0.496 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCC-CeEEEEcCCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGK-GQVSIVEPTDD 66 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~-~~Vtlie~~~~ 66 (706)
.+|+|||||+|||++|..|++. + .+|+|+|+.+.
T Consensus 1 ~~V~IiGgGiaGla~A~~L~~~--g~~~v~v~Er~~~ 35 (414)
T TIGR03219 1 LRVAIIGGGIAGVALALNLCKH--SHLNVQLFEAAPA 35 (414)
T ss_pred CeEEEECCCHHHHHHHHHHHhc--CCCCEEEEecCCc
Confidence 4799999999999999999998 6 59999999876
No 288
>TIGR00275 flavoprotein, HI0933 family. The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae.
Probab=97.87 E-value=1.8e-05 Score=85.71 Aligned_cols=32 Identities=28% Similarity=0.339 Sum_probs=29.1
Q ss_pred cccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 471 GVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 471 vIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
+|||||+||++||..+++. +.+|+|+|+++..
T Consensus 1 vIIGgG~aGl~aAi~aa~~--G~~V~llEk~~~~ 32 (400)
T TIGR00275 1 IIIGGGAAGLMAAITAARE--GLSVLLLEKNKKI 32 (400)
T ss_pred CEEEEeHHHHHHHHHHHhc--CCcEEEEecCccc
Confidence 6999999999999999987 7899999998764
No 289
>TIGR02028 ChlP geranylgeranyl reductase. This model represents the reductase which acts reduces the geranylgeranyl group to the phytyl group in the side chain of chlorophyll. It is unclear whether the enzyme has a preference for acting before or after the attachment of the side chain to chlorophyllide a by chlorophyll synthase. This clade is restricted to plants and cyanobacteria to separate it from the homologues which act in the biosynthesis of bacteriochlorophyll.
Probab=97.86 E-value=3.8e-05 Score=83.21 Aligned_cols=34 Identities=38% Similarity=0.514 Sum_probs=31.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
+||+|||||+||++||..|++. |++|+|+|+++.
T Consensus 1 ~~VvIVGaGPAG~~aA~~la~~--G~~V~llE~~~~ 34 (398)
T TIGR02028 1 LRVAVVGGGPAGASAAETLASA--GIQTFLLERKPD 34 (398)
T ss_pred CeEEEECCcHHHHHHHHHHHhC--CCcEEEEecCCC
Confidence 4899999999999999999999 999999999754
No 290
>PRK06126 hypothetical protein; Provisional
Probab=97.86 E-value=0.00014 Score=82.55 Aligned_cols=58 Identities=9% Similarity=0.087 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHh-CCceEEcCCceEEEeCCCCEEEE--EeCCCc--eEEeecEEEECCCCCch
Q psy8791 267 FYAEKIHDILIG-RGVDVHKGKALVEIDLANKEAVF--KSEDKT--ERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 267 ~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~~v~~--~~~~~g--~~i~~D~vI~a~G~~~~ 324 (706)
.+.+.+.+.+++ .|+++++++++++++.+++.++. ...++| .++.+|+||.|.|....
T Consensus 127 ~l~~~L~~~~~~~~~v~i~~~~~v~~i~~~~~~v~v~~~~~~~g~~~~i~ad~vVgADG~~S~ 189 (545)
T PRK06126 127 YLEPILLEHAAAQPGVTLRYGHRLTDFEQDADGVTATVEDLDGGESLTIRADYLVGCDGARSA 189 (545)
T ss_pred HHHHHHHHHHHhCCCceEEeccEEEEEEECCCeEEEEEEECCCCcEEEEEEEEEEecCCcchH
Confidence 455566666665 58999999999999876654443 222345 37899999999998764
No 291
>PRK07588 hypothetical protein; Provisional
Probab=97.86 E-value=5.8e-05 Score=81.87 Aligned_cols=35 Identities=17% Similarity=0.329 Sum_probs=31.3
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
+||+|||||++|+++|..|++. +.+|+|+|+.+..
T Consensus 1 ~~V~IVGgG~aGl~~A~~L~~~--G~~v~v~E~~~~~ 35 (391)
T PRK07588 1 MKVAISGAGIAGPTLAYWLRRY--GHEPTLIERAPEL 35 (391)
T ss_pred CeEEEECccHHHHHHHHHHHHC--CCceEEEeCCCCc
Confidence 3799999999999999999987 8999999987643
No 292
>PRK08163 salicylate hydroxylase; Provisional
Probab=97.86 E-value=4.1e-05 Score=83.19 Aligned_cols=36 Identities=22% Similarity=0.373 Sum_probs=32.5
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..+|+|||||++|+++|..|++. +.+|+|+|+.+..
T Consensus 4 ~~~V~IvGaGiaGl~~A~~L~~~--g~~v~v~Er~~~~ 39 (396)
T PRK08163 4 VTPVLIVGGGIGGLAAALALARQ--GIKVKLLEQAAEI 39 (396)
T ss_pred CCeEEEECCcHHHHHHHHHHHhC--CCcEEEEeeCccc
Confidence 46899999999999999999997 8999999997653
No 293
>PRK09897 hypothetical protein; Provisional
Probab=97.86 E-value=3e-05 Score=86.04 Aligned_cols=37 Identities=24% Similarity=0.325 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
+++|+|||||++|+++|.+|.+.....+|+|||++..
T Consensus 1 m~~IAIIGgGp~Gl~~a~~L~~~~~~l~V~lfEp~~~ 37 (534)
T PRK09897 1 MKKIAIVGAGPTGIYTFFSLLQQQTPLSISIFEQADE 37 (534)
T ss_pred CCeEEEECCcHHHHHHHHHHHhcCCCCcEEEEecCCC
Confidence 4689999999999999999988744579999999764
No 294
>PRK08013 oxidoreductase; Provisional
Probab=97.85 E-value=4.4e-05 Score=82.99 Aligned_cols=36 Identities=22% Similarity=0.367 Sum_probs=32.7
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
+.+||+|||||++|+++|..|++. +.+|+|||+.+.
T Consensus 2 ~~~dV~IvGaGpaGl~~A~~La~~--G~~v~viE~~~~ 37 (400)
T PRK08013 2 QSVDVVIAGGGMVGLAVACGLQGS--GLRVAVLEQRVP 37 (400)
T ss_pred CcCCEEEECcCHHHHHHHHHHhhC--CCEEEEEeCCCC
Confidence 457999999999999999999987 899999998765
No 295
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=97.85 E-value=5.4e-05 Score=82.82 Aligned_cols=41 Identities=20% Similarity=0.438 Sum_probs=35.5
Q ss_pred CcccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 462 GVFRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 462 ~~~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.++...+||+|||||+||+++|..|++. +.+|+|+|+.+..
T Consensus 13 ~~~~~~~dV~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~~ 53 (415)
T PRK07364 13 STRSLTYDVAIVGGGIVGLTLAAALKDS--GLRIALIEAQPAE 53 (415)
T ss_pred CCCccccCEEEECcCHHHHHHHHHHhcC--CCEEEEEecCCcc
Confidence 3444568999999999999999999998 8999999997754
No 296
>PRK07608 ubiquinone biosynthesis hydroxylase family protein; Provisional
Probab=97.84 E-value=5.3e-05 Score=82.09 Aligned_cols=36 Identities=31% Similarity=0.518 Sum_probs=32.3
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.+||+|||||+||+++|..|.+. +.+|+|+|+++..
T Consensus 5 ~~dv~IvGgG~aGl~~A~~L~~~--G~~v~v~E~~~~~ 40 (388)
T PRK07608 5 KFDVVVVGGGLVGASLALALAQS--GLRVALLAPRAPP 40 (388)
T ss_pred cCCEEEECcCHHHHHHHHHHHhC--CCeEEEEecCCCc
Confidence 46999999999999999999987 8899999987653
No 297
>PRK11445 putative oxidoreductase; Provisional
Probab=97.83 E-value=4.6e-05 Score=81.21 Aligned_cols=34 Identities=18% Similarity=0.448 Sum_probs=30.4
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
|+||+|||||+||+++|..|++. .+|+|+|+.+.
T Consensus 1 ~~dV~IvGaGpaGl~~A~~La~~---~~V~liE~~~~ 34 (351)
T PRK11445 1 HYDVAIIGLGPAGSALARLLAGK---MKVIAIDKKHQ 34 (351)
T ss_pred CceEEEECCCHHHHHHHHHHhcc---CCEEEEECCCc
Confidence 68999999999999999999874 79999998764
No 298
>PRK08274 tricarballylate dehydrogenase; Validated
Probab=97.83 E-value=0.00046 Score=76.70 Aligned_cols=59 Identities=10% Similarity=0.073 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeC--CC--ceEEeecEEEECCCC-Cch
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSE--DK--TERLPYAIMHVTPPM-GPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~--~~--g~~i~~D~vI~a~G~-~~~ 324 (706)
..+...+.+.+++.|++++.++++.++..++++++.+.. .+ ...+.++.||+|+|- ..+
T Consensus 131 ~~l~~~l~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~~~g~~~~i~a~~VIlAtGg~~~n 194 (466)
T PRK08274 131 KALVNALYRSAERLGVEIRYDAPVTALELDDGRFVGARAGSAAGGAERIRAKAVVLAAGGFESN 194 (466)
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEecCCeEEEEEEEccCCceEEEECCEEEECCCCCCCC
Confidence 467777888889999999999999998865555543322 22 346889999999985 444
No 299
>PRK06753 hypothetical protein; Provisional
Probab=97.80 E-value=6.1e-05 Score=81.09 Aligned_cols=35 Identities=20% Similarity=0.458 Sum_probs=31.9
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
++|+|||||+||+++|..|++. +.+++|+|+++..
T Consensus 1 ~~V~IvGgG~aGl~~A~~L~~~--g~~v~v~E~~~~~ 35 (373)
T PRK06753 1 MKIAIIGAGIGGLTAAALLQEQ--GHEVKVFEKNESV 35 (373)
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCcc
Confidence 3799999999999999999998 8999999998764
No 300
>TIGR01984 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase. This model represents the FAD-dependent monoxygenase responsible for the second hydroxylation step in the aerobic ubiquinone bioynthetic pathway. The scope of this model is limited to the proteobacteria. This family is closely related to the UbiF hydroxylase which catalyzes the final hydroxylation step. The enzyme has also been named VisB due to a mutant VISible light sensitive phenotype.
Probab=97.80 E-value=4e-05 Score=82.82 Aligned_cols=33 Identities=24% Similarity=0.532 Sum_probs=31.1
Q ss_pred cEEEECCCHHHHHHHHHHHhhcCC-CeEEEEcCCCC
Q psy8791 32 KLLVVGGGAAGCSMAAKFTSKLGK-GQVSIVEPTDD 66 (706)
Q Consensus 32 ~VvIIGgG~aGl~aA~~L~~~~~~-~~Vtlie~~~~ 66 (706)
||+|||||+||+++|..|+++ | ++|+|+|+.+.
T Consensus 1 dv~IvGaG~aGl~~A~~L~~~--G~~~v~v~E~~~~ 34 (382)
T TIGR01984 1 DVIIVGGGLVGLSLALALSRL--GKIKIALIEANSP 34 (382)
T ss_pred CEEEECccHHHHHHHHHHhcC--CCceEEEEeCCCc
Confidence 699999999999999999999 9 99999999864
No 301
>TIGR01789 lycopene_cycl lycopene cyclase. This model represents a family of bacterial lycopene cyclases catalyzing the transformation of lycopene to carotene. These enzymes are found in a limited spectrum of alpha and gamma proteobacteria as well as Flavobacterium.
Probab=97.79 E-value=9.3e-05 Score=79.19 Aligned_cols=35 Identities=23% Similarity=0.350 Sum_probs=31.2
Q ss_pred cccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 469 HLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 469 ~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
||+|||||+||+++|..|++..++.+|+++|+.+.
T Consensus 1 DviIvGaG~AGl~lA~~L~~~~~g~~V~lle~~~~ 35 (370)
T TIGR01789 1 DCIIVGGGLAGGLIALRLQRARPDFRIRVIEAGRT 35 (370)
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 68999999999999999987656899999999763
No 302
>COG1231 Monoamine oxidase [Amino acid transport and metabolism]
Probab=97.77 E-value=0.00035 Score=73.56 Aligned_cols=41 Identities=29% Similarity=0.374 Sum_probs=36.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ 70 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~ 70 (706)
....+|||||+|++||++|+.|.+. |++|+|+|.+++....
T Consensus 5 ~~~~~viivGaGlaGL~AA~eL~ka--G~~v~ilEar~r~GGR 45 (450)
T COG1231 5 PKTADVIIVGAGLAGLSAAYELKKA--GYQVQILEARDRVGGR 45 (450)
T ss_pred CCCCcEEEECCchHHHHHHHHHhhc--CcEEEEEeccCCcCce
Confidence 3467999999999999999999999 9999999999985544
No 303
>PRK07190 hypothetical protein; Provisional
Probab=97.77 E-value=6.6e-05 Score=83.35 Aligned_cols=37 Identities=22% Similarity=0.196 Sum_probs=32.8
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..+||+|||||++|+++|..|++. +.+|+|||+.+..
T Consensus 4 ~~~dVlIVGAGPaGL~lA~~Lar~--Gi~V~llEr~~~~ 40 (487)
T PRK07190 4 QVTDVVIIGAGPVGLMCAYLGQLC--GLNTVIVDKSDGP 40 (487)
T ss_pred ccceEEEECCCHHHHHHHHHHHHc--CCCEEEEeCCCcc
Confidence 357999999999999999999887 8899999997653
No 304
>PRK07045 putative monooxygenase; Reviewed
Probab=97.75 E-value=8.6e-05 Score=80.42 Aligned_cols=37 Identities=24% Similarity=0.380 Sum_probs=33.5
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
++++|+|||||+||+++|..|++. +.+|+|+|+.+..
T Consensus 4 ~~~~V~IiGgGpaGl~~A~~L~~~--G~~v~v~E~~~~~ 40 (388)
T PRK07045 4 NPVDVLINGSGIAGVALAHLLGAR--GHSVTVVERAARN 40 (388)
T ss_pred ceeEEEEECCcHHHHHHHHHHHhc--CCcEEEEeCCCcc
Confidence 467999999999999999999998 8999999987754
No 305
>COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]
Probab=97.74 E-value=0.0001 Score=79.62 Aligned_cols=33 Identities=27% Similarity=0.523 Sum_probs=31.3
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPT 501 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~ 501 (706)
++||+|||||++|+++|..|++. +.+|+|||+.
T Consensus 2 ~~dV~IvGaG~aGl~lA~~L~~~--G~~V~l~E~~ 34 (387)
T COG0654 2 MLDVAIVGAGPAGLALALALARA--GLDVTLLERA 34 (387)
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--CCcEEEEccC
Confidence 57999999999999999999998 8999999997
No 306
>TIGR02023 BchP-ChlP geranylgeranyl reductase. This model represents a group of geranylgeranyl reductases specific for the biosyntheses of bacteriochlorophyll and chlorophyll. It is unclear whether the processes of isoprenoid ligation to the chlorin ring and reduction of the geranylgeranyl chain to a phytyl chain are necessarily ordered the same way in all species (see introduction to ).
Probab=97.73 E-value=8e-05 Score=80.60 Aligned_cols=32 Identities=22% Similarity=0.521 Sum_probs=30.2
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPT 501 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~ 501 (706)
|||+|||||+||+++|+.|++. +.+|+|+|+.
T Consensus 1 yDVvIVGaGpAG~~aA~~La~~--G~~V~l~E~~ 32 (388)
T TIGR02023 1 YDVAVIGGGPSGATAAETLARA--GIETILLERA 32 (388)
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCcEEEEECC
Confidence 6899999999999999999987 8999999986
No 307
>PRK11445 putative oxidoreductase; Provisional
Probab=97.72 E-value=0.0001 Score=78.47 Aligned_cols=34 Identities=21% Similarity=0.393 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
++||+|||||+||+++|..|++. ++|+|+|+.+.
T Consensus 1 ~~dV~IvGaGpaGl~~A~~La~~---~~V~liE~~~~ 34 (351)
T PRK11445 1 HYDVAIIGLGPAGSALARLLAGK---MKVIAIDKKHQ 34 (351)
T ss_pred CceEEEECCCHHHHHHHHHHhcc---CCEEEEECCCc
Confidence 36999999999999999999885 79999999874
No 308
>PRK09126 hypothetical protein; Provisional
Probab=97.72 E-value=9e-05 Score=80.40 Aligned_cols=35 Identities=29% Similarity=0.358 Sum_probs=32.3
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
.+||+|||||++|+++|..|++. +.+|+|+|+.+.
T Consensus 3 ~~dviIvGgG~aGl~~A~~L~~~--G~~v~v~E~~~~ 37 (392)
T PRK09126 3 HSDIVVVGAGPAGLSFARSLAGS--GLKVTLIERQPL 37 (392)
T ss_pred cccEEEECcCHHHHHHHHHHHhC--CCcEEEEeCCCc
Confidence 57999999999999999999998 899999999765
No 309
>PRK08850 2-octaprenyl-6-methoxyphenol hydroxylase; Validated
Probab=97.69 E-value=9.2e-05 Score=80.66 Aligned_cols=35 Identities=23% Similarity=0.508 Sum_probs=31.9
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPT 501 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~ 501 (706)
|..+||+|||||++|+++|..|.+. +.+|+|+|+.
T Consensus 2 m~~~dV~IvGaG~~Gl~~A~~L~~~--G~~v~viE~~ 36 (405)
T PRK08850 2 MQSVDVAIIGGGMVGLALAAALKES--DLRIAVIEGQ 36 (405)
T ss_pred CCcCCEEEECccHHHHHHHHHHHhC--CCEEEEEcCC
Confidence 4567999999999999999999887 8999999985
No 310
>KOG2665|consensus
Probab=97.69 E-value=0.0001 Score=72.89 Aligned_cols=75 Identities=11% Similarity=-0.116 Sum_probs=52.6
Q ss_pred eCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCC-----EEEEEeCCCceEEeecEEEECCCCCchhhhhcCC
Q psy8791 257 TGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANK-----EAVFKSEDKTERLPYAIMHVTPPMGPVPELATSR 331 (706)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~-----~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~~ 331 (706)
.+...+..-..+...+-+.++..|-.+.++.++..+...+. .+++ ....++++++..+|-|+|+..+-..+.++
T Consensus 187 sPhtGIvD~~~v~ls~~edF~~~gg~i~~n~~l~g~~~n~~~~~~Ypivv-~ngk~ee~r~~~~vtc~gl~sdr~aa~sg 265 (453)
T KOG2665|consen 187 SPHTGIVDWGSVTLSFGEDFDFMGGRIYTNFRLQGIAQNKEATFSYPIVV-LNGKGEEKRTKNVVTCAGLQSDRCAALSG 265 (453)
T ss_pred CCCcceeehHHHHHHHHHHHHHhcccccccceeccchhccCCCCCCceEE-ecCccceeEEeEEEEeccccHhHHHHHhC
Confidence 33444443344555666668899999999999999876543 1333 23357899999999999999886666665
Q ss_pred C
Q psy8791 332 L 332 (706)
Q Consensus 332 l 332 (706)
.
T Consensus 266 c 266 (453)
T KOG2665|consen 266 C 266 (453)
T ss_pred C
Confidence 5
No 311
>PRK08401 L-aspartate oxidase; Provisional
Probab=97.67 E-value=6e-05 Score=83.39 Aligned_cols=34 Identities=35% Similarity=0.627 Sum_probs=31.2
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
|+||||||+|.||++||..+++. +.+|+|||+.+
T Consensus 1 ~~DVvVVGaG~AGl~AAi~aae~--G~~V~liek~~ 34 (466)
T PRK08401 1 MMKVGIVGGGLAGLTAAISLAKK--GFDVTIIGPGI 34 (466)
T ss_pred CCeEEEECccHHHHHHHHHHHHC--CCeEEEEeCCC
Confidence 58999999999999999999887 78999999964
No 312
>PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Probab=97.66 E-value=0.00012 Score=79.65 Aligned_cols=34 Identities=21% Similarity=0.302 Sum_probs=31.1
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
.+||+|||||++|+++|..|++. +.+|+|||+.+
T Consensus 2 ~~dV~IVGaG~aGl~~A~~L~~~--G~~v~viE~~~ 35 (405)
T PRK05714 2 RADLLIVGAGMVGSALALALQGS--GLEVLLLDGGP 35 (405)
T ss_pred CccEEEECccHHHHHHHHHHhcC--CCEEEEEcCCC
Confidence 36899999999999999999887 89999999875
No 313
>PF01946 Thi4: Thi4 family; PDB: 1RP0_A 3FPZ_B 3JSK_K.
Probab=97.66 E-value=4.4e-05 Score=72.42 Aligned_cols=35 Identities=23% Similarity=0.344 Sum_probs=30.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
.+||+|||||++||+||++|++. +++|.+||++..
T Consensus 17 ~~DV~IVGaGpaGl~aA~~La~~--g~kV~v~E~~~~ 51 (230)
T PF01946_consen 17 EYDVAIVGAGPAGLTAAYYLAKA--GLKVAVIERKLS 51 (230)
T ss_dssp EESEEEE--SHHHHHHHHHHHHH--TS-EEEEESSSS
T ss_pred cCCEEEECCChhHHHHHHHHHHC--CCeEEEEecCCC
Confidence 47999999999999999999999 999999999875
No 314
>TIGR00292 thiazole biosynthesis enzyme. This enzyme is involved in the biosynthesis of the thiamine precursor thiazole, and is repressed by thiamine.This family includes c-thi1, a Citrus gene induced during natural and ethylene induced fruit maturation and is highly homologous to plant and yeast thi genes involved in thiamine biosynthesis.
Probab=97.66 E-value=9.1e-05 Score=74.50 Aligned_cols=36 Identities=19% Similarity=0.240 Sum_probs=32.7
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.+||+|||||+||+++|..+++. +.+|+|+|+++..
T Consensus 21 ~~DVvIVGgGpAGL~aA~~la~~--G~~V~vlEk~~~~ 56 (254)
T TIGR00292 21 ESDVIIVGAGPSGLTAAYYLAKN--GLKVCVLERSLAF 56 (254)
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCCC
Confidence 57999999999999999999987 7899999997754
No 315
>PRK04176 ribulose-1,5-biphosphate synthetase; Provisional
Probab=97.66 E-value=7.3e-05 Score=75.44 Aligned_cols=36 Identities=19% Similarity=0.292 Sum_probs=32.2
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.+||+|||||+||++||..|.+. +.+|+|+|+++..
T Consensus 25 ~~DVvIVGgGpAGl~AA~~la~~--G~~V~liEk~~~~ 60 (257)
T PRK04176 25 EVDVAIVGAGPSGLTAAYYLAKA--GLKVAVFERKLSF 60 (257)
T ss_pred cCCEEEECccHHHHHHHHHHHhC--CCeEEEEecCCCC
Confidence 46999999999999999999886 8899999987653
No 316
>PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1.1.99.5 from EC), Sarcosine oxidase beta subunit (1.5.3.1 from EC), D-alanine oxidase (1.4.99.1 from EC), D-aspartate oxidase (1.4.3.1 from EC). D-amino acid oxidase (1.4.3.3 from EC) (DAMOX or DAO) is an FAD flavoenzyme that catalyzes the oxidation of neutral and basic D-amino acids into their corresponding keto acids. DAOs have been characterised and sequenced in fungi and vertebrates where they are known to be located in the peroxisomes. D-aspartate oxidase (1.4.3.1 from EC) (DASOX) [] is an enzyme, structurally related to DAO, which catalyzes the same reaction but is active only toward dicarboxylic D-amino acids. In DAO, a conserved histidine has been shown [] to be important for the enzyme's catalytic activity.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2RGO_A 3NYE_A 3NYF_A 3NYC_A 3SM8_A 3SGL_A 3PVC_A 3DME_A 2GAH_B 3NLC_A ....
Probab=97.65 E-value=2.8e-05 Score=82.97 Aligned_cols=40 Identities=28% Similarity=0.453 Sum_probs=30.8
Q ss_pred CCcEEEec-eEEEEEcCCCe---EEcCCCcEEeeCEEEEecCccc
Q psy8791 595 SGATWVKD-KIVSFDPENNR---VRTQAGSEISYEYMIVASGIQM 635 (706)
Q Consensus 595 ~gv~~~~~-~v~~id~~~~~---V~~~~g~~i~yd~lViAtGs~~ 635 (706)
.|++++.+ +|++|+.+... |.+.+|+ +.+|++|+|+|...
T Consensus 160 ~Gv~i~~~~~V~~i~~~~~~v~gv~~~~g~-i~ad~vV~a~G~~s 203 (358)
T PF01266_consen 160 AGVEIRTGTEVTSIDVDGGRVTGVRTSDGE-IRADRVVLAAGAWS 203 (358)
T ss_dssp TT-EEEESEEEEEEEEETTEEEEEEETTEE-EEECEEEE--GGGH
T ss_pred hhhhccccccccchhhcccccccccccccc-cccceeEecccccc
Confidence 69999776 99999987765 6678886 99999999999854
No 317
>PRK06996 hypothetical protein; Provisional
Probab=97.65 E-value=0.0011 Score=72.06 Aligned_cols=59 Identities=7% Similarity=-0.133 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCC-Cc-eEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSED-KT-ERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~-~g-~~i~~D~vI~a~G~~~~ 324 (706)
..+.+.+.+.+++.|++++.++++.+++.++..+++...+ +| +++.+|+||-|-|...+
T Consensus 115 ~~l~~~L~~~~~~~g~~~~~~~~v~~~~~~~~~v~v~~~~~~g~~~i~a~lvIgADG~~~s 175 (398)
T PRK06996 115 GSLVAALARAVRGTPVRWLTSTTAHAPAQDADGVTLALGTPQGARTLRARIAVQAEGGLFH 175 (398)
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeeeeeeecCCeEEEEECCCCcceEEeeeEEEECCCCCch
Confidence 4577788888888999999999999997766656554322 22 68999999999996443
No 318
>PLN00093 geranylgeranyl diphosphate reductase; Provisional
Probab=97.64 E-value=0.00014 Score=79.77 Aligned_cols=35 Identities=23% Similarity=0.408 Sum_probs=31.9
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
.++||+|||||+||+++|..|++. +.+|+|+|+.+
T Consensus 38 ~~~DViIVGaGPAG~~aA~~LA~~--G~~VlllEr~~ 72 (450)
T PLN00093 38 RKLRVAVIGGGPAGACAAETLAKG--GIETFLIERKL 72 (450)
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC--CCcEEEEecCC
Confidence 357999999999999999999988 89999999865
No 319
>KOG2415|consensus
Probab=97.63 E-value=0.00038 Score=71.46 Aligned_cols=37 Identities=27% Similarity=0.432 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhh----cCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSK----LGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~----~~~~~Vtlie~~~~ 66 (706)
..||+|||||+|||+||.+|++. ..+.+|.|+|+...
T Consensus 76 ~~Dv~IVG~GPAGLsaAIrlKQla~~~~~dlrVcvvEKaa~ 116 (621)
T KOG2415|consen 76 EVDVVIVGAGPAGLSAAIRLKQLAAKANKDLRVCVVEKAAE 116 (621)
T ss_pred cccEEEECCCchhHHHHHHHHHHHHhcCCceEEEEEeeccc
Confidence 46899999999999999999876 35689999999875
No 320
>COG3380 Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]
Probab=97.63 E-value=4.7e-05 Score=73.88 Aligned_cols=35 Identities=26% Similarity=0.396 Sum_probs=31.1
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
|..|+|||+|.||++||..|++. +.+|+|+||+.-
T Consensus 1 ~~siaIVGaGiAGl~aA~~L~~a--G~~vtV~eKg~G 35 (331)
T COG3380 1 MPSIAIVGAGIAGLAAAYALREA--GREVTVFEKGRG 35 (331)
T ss_pred CCcEEEEccchHHHHHHHHHHhc--CcEEEEEEcCCC
Confidence 34699999999999999999998 899999999643
No 321
>PRK05732 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=97.63 E-value=0.00015 Score=78.65 Aligned_cols=37 Identities=27% Similarity=0.438 Sum_probs=31.9
Q ss_pred cccccccccCcchhHHHHHHHHHhh-cCCCcEEEECCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSR-LGKGQVSIVEPT 501 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~-~~~~~i~vid~~ 501 (706)
|+++||+|||||+||+++|..|++. ..+.+|+|+|+.
T Consensus 1 m~~~dv~IvGaG~aGl~~A~~L~~~~~~G~~v~v~E~~ 38 (395)
T PRK05732 1 MSRMDVIIVGGGMAGATLALALSRLSHGGLPVALIEAF 38 (395)
T ss_pred CCcCCEEEECcCHHHHHHHHHhhhcccCCCEEEEEeCC
Confidence 4578999999999999999999874 236899999984
No 322
>KOG0399|consensus
Probab=97.62 E-value=9.2e-05 Score=83.96 Aligned_cols=40 Identities=25% Similarity=0.439 Sum_probs=34.3
Q ss_pred cccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 463 VFRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 463 ~~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..+.-++|.|||+|+||++||-+|-+. ++.|+|+|+++..
T Consensus 1781 ~~rtg~~vaiigsgpaglaaadqlnk~--gh~v~vyer~dr~ 1820 (2142)
T KOG0399|consen 1781 AFRTGKRVAIIGSGPAGLAAADQLNKA--GHTVTVYERSDRV 1820 (2142)
T ss_pred ccccCcEEEEEccCchhhhHHHHHhhc--CcEEEEEEecCCc
Confidence 344567999999999999999999988 8999999987653
No 323
>PRK08401 L-aspartate oxidase; Provisional
Probab=97.62 E-value=0.00019 Score=79.36 Aligned_cols=34 Identities=35% Similarity=0.470 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
++||||||||.|||+||..+++. |.+|+|||+.+
T Consensus 1 ~~DVvVVGaG~AGl~AAi~aae~--G~~V~liek~~ 34 (466)
T PRK08401 1 MMKVGIVGGGLAGLTAAISLAKK--GFDVTIIGPGI 34 (466)
T ss_pred CCeEEEECccHHHHHHHHHHHHC--CCeEEEEeCCC
Confidence 37999999999999999999998 89999999964
No 324
>TIGR01988 Ubi-OHases Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family. This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4, ) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) maki
Probab=97.62 E-value=0.00018 Score=77.85 Aligned_cols=34 Identities=24% Similarity=0.486 Sum_probs=31.3
Q ss_pred cccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 469 HLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 469 ~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
||+|||||+||+++|..|++. +.+|+|+|+.+..
T Consensus 1 dViIvGaG~aGl~~A~~L~~~--G~~v~v~Er~~~~ 34 (385)
T TIGR01988 1 DIVIVGGGMVGLALALALARS--GLKIALIEATPAE 34 (385)
T ss_pred CEEEECCCHHHHHHHHHHhcC--CCEEEEEeCCCcc
Confidence 689999999999999999998 8999999998764
No 325
>PRK08244 hypothetical protein; Provisional
Probab=97.62 E-value=0.00011 Score=82.10 Aligned_cols=35 Identities=17% Similarity=0.458 Sum_probs=32.0
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
+||+|||||++|+++|..|++. +.+|+|||+.+..
T Consensus 3 ~dVlIVGaGpaGl~lA~~L~~~--G~~v~viEr~~~~ 37 (493)
T PRK08244 3 YEVIIIGGGPVGLMLASELALA--GVKTCVIERLKET 37 (493)
T ss_pred CCEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCCC
Confidence 6899999999999999999998 8999999997653
No 326
>TIGR02028 ChlP geranylgeranyl reductase. This model represents the reductase which acts reduces the geranylgeranyl group to the phytyl group in the side chain of chlorophyll. It is unclear whether the enzyme has a preference for acting before or after the attachment of the side chain to chlorophyllide a by chlorophyll synthase. This clade is restricted to plants and cyanobacteria to separate it from the homologues which act in the biosynthesis of bacteriochlorophyll.
Probab=97.60 E-value=0.00019 Score=77.84 Aligned_cols=34 Identities=38% Similarity=0.542 Sum_probs=30.9
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
+||+|||||+||++||..|++. +.+|+|+|+.+.
T Consensus 1 ~~VvIVGaGPAG~~aA~~la~~--G~~V~llE~~~~ 34 (398)
T TIGR02028 1 LRVAVVGGGPAGASAAETLASA--GIQTFLLERKPD 34 (398)
T ss_pred CeEEEECCcHHHHHHHHHHHhC--CCcEEEEecCCC
Confidence 4899999999999999999988 899999998643
No 327
>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
Probab=97.59 E-value=0.0002 Score=77.60 Aligned_cols=36 Identities=25% Similarity=0.440 Sum_probs=32.4
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
+.+||+|||||++|+++|..|++. +.+|+|||+.+.
T Consensus 4 ~~~dViIvGgG~aGl~~A~~La~~--G~~V~liE~~~~ 39 (391)
T PRK08020 4 QPTDIAIVGGGMVGAALALGLAQH--GFSVAVLEHAAP 39 (391)
T ss_pred ccccEEEECcCHHHHHHHHHHhcC--CCEEEEEcCCCC
Confidence 468999999999999999999987 899999998753
No 328
>KOG0029|consensus
Probab=97.59 E-value=7.9e-05 Score=81.93 Aligned_cols=39 Identities=28% Similarity=0.401 Sum_probs=35.6
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 26 SSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 26 ~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
....+++|+|||||.|||+||++|.+. |++|+|+|.+++
T Consensus 11 ~~~~~~~VIVIGAGiaGLsAArqL~~~--G~~V~VLEARdR 49 (501)
T KOG0029|consen 11 EAGKKKKVIVIGAGLAGLSAARQLQDF--GFDVLVLEARDR 49 (501)
T ss_pred cccCCCcEEEECCcHHHHHHHHHHHHc--CCceEEEeccCC
Confidence 445567999999999999999999999 999999999997
No 329
>COG0579 Predicted dehydrogenase [General function prediction only]
Probab=97.59 E-value=8.4e-05 Score=79.20 Aligned_cols=40 Identities=20% Similarity=0.338 Sum_probs=36.0
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
|.++||||||||..|+++|..|+++.|+++|+|+|+.+..
T Consensus 1 ~~~~DvvIIGgGI~G~a~a~~Ls~~~p~~~V~llEk~~~~ 40 (429)
T COG0579 1 MMDYDVVIIGGGIMGAATAYELSEYEPDLSVALLEKEDGV 40 (429)
T ss_pred CCceeEEEECCcHHHHHHHHHHHHhCCCceEEEEEccCcc
Confidence 3578999999999999999999999888999999997653
No 330
>COG0445 GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning]
Probab=97.58 E-value=5.7e-05 Score=80.54 Aligned_cols=39 Identities=15% Similarity=0.270 Sum_probs=33.1
Q ss_pred CCcEEEeceEEEEEcCCC----eEEcCCCcEEeeCEEEEecCc
Q psy8791 595 SGATWVKDKIVSFDPENN----RVRTQAGSEISYEYMIVASGI 633 (706)
Q Consensus 595 ~gv~~~~~~v~~id~~~~----~V~~~~g~~i~yd~lViAtGs 633 (706)
.+++++++.|+.+..++. .|.+.+|..+.++.|||+||.
T Consensus 114 ~NL~l~q~~v~dli~e~~~~v~GV~t~~G~~~~a~aVVlTTGT 156 (621)
T COG0445 114 PNLHLLQGEVEDLIVEEGQRVVGVVTADGPEFHAKAVVLTTGT 156 (621)
T ss_pred CCceehHhhhHHHhhcCCCeEEEEEeCCCCeeecCEEEEeecc
Confidence 589999999998876433 368899999999999999996
No 331
>PLN02985 squalene monooxygenase
Probab=97.57 E-value=0.00057 Score=76.29 Aligned_cols=65 Identities=14% Similarity=0.196 Sum_probs=44.0
Q ss_pred HHHHHHhhchHHHHHHhhcceec-------CCCcccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 437 MFQMKKQVMPFLYWNLMLRGYWN-------GPGVFRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 437 ~~~l~~~~~~~~y~~~~~~~~~~-------~~~~~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
.|.+--+.+.|+.+....+.+.. ++.....++||+|||||.+|+++|..|++. +.+|+|+|+.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DViIVGAG~aGlalA~aLa~~--G~~V~vlEr~~~ 77 (514)
T PLN02985 6 LWTLLAFVLTWTVFYVTNRKKKATELADAVAEERKDGATDVIIVGAGVGGSALAYALAKD--GRRVHVIERDLR 77 (514)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhcchhhhhcccCcCCCceEEEECCCHHHHHHHHHHHHc--CCeEEEEECcCC
Confidence 34444455566655543322111 222333467999999999999999999987 899999998653
No 332
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=97.57 E-value=0.00039 Score=56.38 Aligned_cols=58 Identities=28% Similarity=0.354 Sum_probs=48.6
Q ss_pred HHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEE
Q psy8791 239 DEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAV 300 (706)
Q Consensus 239 ~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~ 300 (706)
+..+.+.+. +++++++.+.+++ ++.+...+++.|+++||++++++.+++++.++..+.
T Consensus 15 A~~l~~~g~----~vtli~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~ 74 (80)
T PF00070_consen 15 AEALAELGK----EVTLIERSDRLLPGFDPDAAKILEEYLRKRGVEVHTNTKVKEIEKDGDGVE 74 (80)
T ss_dssp HHHHHHTTS----EEEEEESSSSSSTTSSHHHHHHHHHHHHHTTEEEEESEEEEEEEEETTSEE
T ss_pred HHHHHHhCc----EEEEEeccchhhhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEE
Confidence 344566663 5999999999985 789999999999999999999999999988765543
No 333
>PRK08132 FAD-dependent oxidoreductase; Provisional
Probab=97.57 E-value=0.00022 Score=80.85 Aligned_cols=37 Identities=22% Similarity=0.352 Sum_probs=33.1
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.++||+|||||++|+++|..|.+. +.+|+|||+.+..
T Consensus 22 ~~~dVlIVGaGpaGl~lA~~L~~~--G~~v~viE~~~~~ 58 (547)
T PRK08132 22 ARHPVVVVGAGPVGLALAIDLAQQ--GVPVVLLDDDDTL 58 (547)
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC--CCcEEEEeCCCCC
Confidence 457999999999999999999987 8999999998743
No 334
>TIGR03219 salicylate_mono salicylate 1-monooxygenase. Members of this protein family are salicylate 1-monooxygenase, also called salicylate hydroxylase. This enzyme converts salicylate to catechol, which is a common intermediate in the degradation of a number of aromatic compounds (phenol, toluene, benzoate, etc.). The gene for this protein may occur in catechol degradation genes, such as those of the meta-cleavage pathway.
Probab=97.56 E-value=0.00027 Score=77.21 Aligned_cols=34 Identities=24% Similarity=0.506 Sum_probs=30.4
Q ss_pred cccccCcchhHHHHHHHHHhhcCC-CcEEEECCCCCC
Q psy8791 469 HLGVVGGGAAGCSMAAKFTSRLGK-GQVSIVEPTDDH 504 (706)
Q Consensus 469 ~ivIIGaG~aG~~~a~~l~~~~~~-~~i~vid~~~~~ 504 (706)
+|+|||||.||+++|..|++. + .+|+|+|+.+..
T Consensus 2 ~V~IiGgGiaGla~A~~L~~~--g~~~v~v~Er~~~~ 36 (414)
T TIGR03219 2 RVAIIGGGIAGVALALNLCKH--SHLNVQLFEAAPAF 36 (414)
T ss_pred eEEEECCCHHHHHHHHHHHhc--CCCCEEEEecCCcC
Confidence 799999999999999999987 5 599999997654
No 335
>PF12831 FAD_oxidored: FAD dependent oxidoreductase; PDB: 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 2GAG_A 2GAH_A.
Probab=97.56 E-value=7.6e-05 Score=81.61 Aligned_cols=34 Identities=29% Similarity=0.423 Sum_probs=28.2
Q ss_pred cEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 32 KLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 32 ~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
||||||||+||++||..+++. |.+|+|||+.++.
T Consensus 1 DVVVvGgG~aG~~AAi~AAr~--G~~VlLiE~~~~l 34 (428)
T PF12831_consen 1 DVVVVGGGPAGVAAAIAAARA--GAKVLLIEKGGFL 34 (428)
T ss_dssp EEEEE--SHHHHHHHHHHHHT--TS-EEEE-SSSSS
T ss_pred CEEEECccHHHHHHHHHHHHC--CCEEEEEECCccC
Confidence 799999999999999999999 9999999999873
No 336
>PRK06185 hypothetical protein; Provisional
Probab=97.55 E-value=0.00027 Score=77.06 Aligned_cols=36 Identities=25% Similarity=0.411 Sum_probs=32.5
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
..+||+|||||++|+++|..|++. +.+|+|||+++.
T Consensus 5 ~~~dV~IvGgG~~Gl~~A~~La~~--G~~v~liE~~~~ 40 (407)
T PRK06185 5 ETTDCCIVGGGPAGMMLGLLLARA--GVDVTVLEKHAD 40 (407)
T ss_pred ccccEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCc
Confidence 457999999999999999999987 899999998754
No 337
>PRK06183 mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Validated
Probab=97.54 E-value=0.00025 Score=80.21 Aligned_cols=38 Identities=18% Similarity=0.208 Sum_probs=34.0
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
+.++||+|||||++|+++|..|++. +.+|+|||+.+..
T Consensus 8 ~~~~dV~IVGaGp~Gl~lA~~L~~~--G~~v~v~Er~~~~ 45 (538)
T PRK06183 8 AHDTDVVIVGAGPVGLTLANLLGQY--GVRVLVLERWPTL 45 (538)
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCCC
Confidence 4568999999999999999999987 8999999998754
No 338
>TIGR01984 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase. This model represents the FAD-dependent monoxygenase responsible for the second hydroxylation step in the aerobic ubiquinone bioynthetic pathway. The scope of this model is limited to the proteobacteria. This family is closely related to the UbiF hydroxylase which catalyzes the final hydroxylation step. The enzyme has also been named VisB due to a mutant VISible light sensitive phenotype.
Probab=97.54 E-value=0.00023 Score=76.88 Aligned_cols=35 Identities=23% Similarity=0.408 Sum_probs=31.5
Q ss_pred cccccCcchhHHHHHHHHHhhcCC-CcEEEECCCCCCc
Q psy8791 469 HLGVVGGGAAGCSMAAKFTSRLGK-GQVSIVEPTDDHY 505 (706)
Q Consensus 469 ~ivIIGaG~aG~~~a~~l~~~~~~-~~i~vid~~~~~~ 505 (706)
||+|||||+||+++|..|.+. + .+|+|+|+.+...
T Consensus 1 dv~IvGaG~aGl~~A~~L~~~--G~~~v~v~E~~~~~~ 36 (382)
T TIGR01984 1 DVIIVGGGLVGLSLALALSRL--GKIKIALIEANSPSA 36 (382)
T ss_pred CEEEECccHHHHHHHHHHhcC--CCceEEEEeCCCccc
Confidence 689999999999999999998 8 9999999976543
No 339
>TIGR00136 gidA glucose-inhibited division protein A. GidA, the longer of two forms of GidA-related proteins, appears to be present in all complete eubacterial genomes so far, as well as Saccharomyces cerevisiae. A subset of these organisms have a closely related protein. GidA is absent in the Archaea. It appears to act with MnmE, in an alpha2/beta2 heterotetramer, in the 5-carboxymethylaminomethyl modification of uridine 34 in certain tRNAs. The shorter, related protein, previously called gid or gidA(S), is now called TrmFO (see model TIGR00137).
Probab=97.52 E-value=0.0002 Score=79.61 Aligned_cols=34 Identities=29% Similarity=0.487 Sum_probs=30.5
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
+||+|||||+||+.+|..+.+. +.+|+||+++..
T Consensus 1 yDViVIGaG~AGl~aA~ala~~--G~~v~Lie~~~~ 34 (617)
T TIGR00136 1 FDVIVIGGGHAGCEAALAAARM--GAKTLLLTLNLD 34 (617)
T ss_pred CeEEEECccHHHHHHHHHHHHC--CCCEEEEecccc
Confidence 5899999999999999999987 789999998643
No 340
>PRK11259 solA N-methyltryptophan oxidase; Provisional
Probab=97.51 E-value=0.00021 Score=77.01 Aligned_cols=35 Identities=17% Similarity=0.168 Sum_probs=32.1
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
.++||+|||||..|+++|..|+++ +.+|+|||++.
T Consensus 2 ~~~dv~IIGgGi~G~s~A~~L~~~--g~~V~lie~~~ 36 (376)
T PRK11259 2 MRYDVIVIGLGSMGSAAGYYLARR--GLRVLGLDRFM 36 (376)
T ss_pred CcccEEEECCCHHHHHHHHHHHHC--CCeEEEEeccc
Confidence 468999999999999999999998 78999999865
No 341
>PRK11728 hydroxyglutarate oxidase; Provisional
Probab=97.50 E-value=0.00016 Score=78.46 Aligned_cols=37 Identities=24% Similarity=0.564 Sum_probs=33.3
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
|+||+|||||.+|+++|..|+++.++.+|+|+|+++.
T Consensus 2 ~~dVvIIGgGi~G~s~A~~La~~~~g~~V~llE~~~~ 38 (393)
T PRK11728 2 MYDFVIIGGGIVGLSTAMQLQERYPGARIAVLEKESG 38 (393)
T ss_pred CccEEEECCcHHHHHHHHHHHHhCCCCeEEEEeCCCc
Confidence 4799999999999999999999867789999999753
No 342
>COG3380 Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]
Probab=97.48 E-value=0.00012 Score=71.14 Aligned_cols=34 Identities=24% Similarity=0.361 Sum_probs=31.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..|+|||+|+||++||+.|+.. |.+|||+||+.-
T Consensus 2 ~siaIVGaGiAGl~aA~~L~~a--G~~vtV~eKg~G 35 (331)
T COG3380 2 PSIAIVGAGIAGLAAAYALREA--GREVTVFEKGRG 35 (331)
T ss_pred CcEEEEccchHHHHHHHHHHhc--CcEEEEEEcCCC
Confidence 4699999999999999999999 999999999873
No 343
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=97.47 E-value=7.4e-05 Score=79.60 Aligned_cols=39 Identities=26% Similarity=0.399 Sum_probs=32.3
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCc
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQP 508 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~ 508 (706)
+||+|||||+||+++|..|++. +.+|+|||+.+.....+
T Consensus 2 ~dV~IvGaG~aGl~~A~~L~~~--G~~v~i~E~~~~~~~~~ 40 (356)
T PF01494_consen 2 YDVAIVGAGPAGLAAALALARA--GIDVTIIERRPDPRPKG 40 (356)
T ss_dssp EEEEEE--SHHHHHHHHHHHHT--TCEEEEEESSSSCCCSS
T ss_pred ceEEEECCCHHHHHHHHHHHhc--ccccccchhcccccccc
Confidence 5899999999999999999998 89999999987654333
No 344
>PF04820 Trp_halogenase: Tryptophan halogenase; InterPro: IPR006905 Tryptophan halogenase catalyses the chlorination of tryptophan to form 7-chlorotryptophan. This is the first step in the biosynthesis of pyrrolnitrin, an antibiotic with broad-spectrum anti-fungal activity. Tryptophan halogenase is NADH-dependent [].; PDB: 2PYX_B 2OAL_B 2E4G_A 2OAM_A 2OA1_B 2O9Z_A 3I3L_A 2AQJ_A 2ARD_A 2JKC_A ....
Probab=97.44 E-value=0.0002 Score=78.68 Aligned_cols=42 Identities=24% Similarity=0.446 Sum_probs=30.9
Q ss_pred CCcEEEeceEEEEEcCCC----eEEcCCCcEEeeCEEEEecCcccC
Q psy8791 595 SGATWVKDKIVSFDPENN----RVRTQAGSEISYEYMIVASGIQMY 636 (706)
Q Consensus 595 ~gv~~~~~~v~~id~~~~----~V~~~~g~~i~yd~lViAtGs~~~ 636 (706)
.||+++.++|+.++.+.. .|++.+|+++++|.+|=|||....
T Consensus 167 ~Gv~~~~g~V~~v~~~~~g~i~~v~~~~g~~i~ad~~IDASG~~s~ 212 (454)
T PF04820_consen 167 RGVEVIEGTVVDVELDEDGRITAVRLDDGRTIEADFFIDASGRRSL 212 (454)
T ss_dssp TT-EEEET-EEEEEE-TTSEEEEEEETTSEEEEESEEEE-SGGG-C
T ss_pred CCCEEEeCEEEEEEEcCCCCEEEEEECCCCEEEEeEEEECCCccch
Confidence 699999999988766543 467889999999999999997654
No 345
>TIGR01989 COQ6 Ubiquinone biosynthesis mono0xygenase COQ6. This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone
Probab=97.43 E-value=0.00033 Score=77.02 Aligned_cols=35 Identities=29% Similarity=0.533 Sum_probs=29.9
Q ss_pred ccccccCcchhHHHHHHHHHhhc--CCCcEEEECCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRL--GKGQVSIVEPTD 502 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~--~~~~i~vid~~~ 502 (706)
+||+|||||++|+++|..|++.. .+.+|+|||+.+
T Consensus 1 ~DV~IVGaGp~Gl~~A~~La~~~~~~G~~v~viE~~~ 37 (437)
T TIGR01989 1 FDVVIVGGGPVGLALAAALGNNPLTKDLKVLLLDAVD 37 (437)
T ss_pred CcEEEECCcHHHHHHHHHHhcCcccCCCeEEEEeCCC
Confidence 58999999999999999998721 278999999954
No 346
>COG3349 Uncharacterized conserved protein [Function unknown]
Probab=97.43 E-value=0.00012 Score=78.29 Aligned_cols=38 Identities=21% Similarity=0.284 Sum_probs=34.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ 70 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~ 70 (706)
++|+|+|||.|||+||++|+++ |++|||+|.+++....
T Consensus 1 ~rVai~GaG~AgL~~a~~La~~--g~~vt~~ea~~~~GGk 38 (485)
T COG3349 1 MRVAIAGAGLAGLAAAYELADA--GYDVTLYEARDRLGGK 38 (485)
T ss_pred CeEEEEcccHHHHHHHHHHHhC--CCceEEEeccCccCce
Confidence 5899999999999999999999 9999999999975443
No 347
>PRK06126 hypothetical protein; Provisional
Probab=97.42 E-value=0.00033 Score=79.51 Aligned_cols=37 Identities=27% Similarity=0.361 Sum_probs=33.1
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCc
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHY 505 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~ 505 (706)
.++|+|||||++|+++|..|+++ +.+|+|||+.+...
T Consensus 7 ~~~VlIVGaGpaGL~~Al~La~~--G~~v~viEr~~~~~ 43 (545)
T PRK06126 7 ETPVLIVGGGPVGLALALDLGRR--GVDSILVERKDGTA 43 (545)
T ss_pred cCCEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCCCCC
Confidence 46999999999999999999998 89999999876543
No 348
>KOG2853|consensus
Probab=97.42 E-value=0.0074 Score=60.74 Aligned_cols=94 Identities=14% Similarity=0.126 Sum_probs=58.2
Q ss_pred CCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCE-EEE------------------EeCCCc--eEEeecEEEECCC
Q psy8791 262 LFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKE-AVF------------------KSEDKT--ERLPYAIMHVTPP 320 (706)
Q Consensus 262 ~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~-v~~------------------~~~~~g--~~i~~D~vI~a~G 320 (706)
.+.+-.+-..+++....+|+.+..| .|+.++-+..+ +.. +..+|+ +.++|+++|.|.|
T Consensus 239 wfdpw~LLs~~rrk~~~lGv~f~~G-eV~~Fef~sqr~v~~~tDd~t~~~~~~~i~~vvV~m~d~~~r~vk~al~V~aAG 317 (509)
T KOG2853|consen 239 WFDPWALLSGIRRKAITLGVQFVKG-EVVGFEFESQRAVHAFTDDGTAKLRAQRISGVVVRMNDALARPVKFALCVNAAG 317 (509)
T ss_pred ccCHHHHHHHHHHHhhhhcceEecc-eEEEEEEecccceeeecccchhhhhhcccceeEEecCchhcCceeEEEEEeccC
Confidence 3445677778888888899999987 34444322111 111 112222 4689999999999
Q ss_pred CCchhhhhcCCCCCCCCceeeCccccccCCCCCEEEcc
Q psy8791 321 MGPVPELATSRLVDQSGYVNVDKATLQHVKYSNVFAIG 358 (706)
Q Consensus 321 ~~~~~~~~~~~l~~~~G~i~vd~~~l~~~~~~~Ifa~G 358 (706)
.+.-....-+|+-...|.+.|-- -.+ +....||++=
T Consensus 318 a~s~QvArlAgIG~g~g~L~vpl-Pie-pRKRyvyvi~ 353 (509)
T KOG2853|consen 318 AWSGQVARLAGIGKGPGLLAVPL-PIE-PRKRYVYVIF 353 (509)
T ss_pred ccHHHHHHHhccCCCCceeeecc-cCC-ccceeEEEEe
Confidence 99987777677755556665543 123 2334577764
No 349
>TIGR01810 betA choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified.
Probab=97.42 E-value=0.004 Score=70.29 Aligned_cols=67 Identities=10% Similarity=0.041 Sum_probs=45.9
Q ss_pred HHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCC-Cce---EEeecEEEECCCC-CchhhhhcCCCCC
Q psy8791 268 YAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSED-KTE---RLPYAIMHVTPPM-GPVPELATSRLVD 334 (706)
Q Consensus 268 ~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~-~g~---~i~~D~vI~a~G~-~~~~~~~~~~l~~ 334 (706)
...++...+++.|++|++++.|.+|.-++++++.+... +++ .+.++.||+|.|. ..+.++..+|+-+
T Consensus 196 ~~~~l~~a~~r~nl~i~~~~~V~rI~~~~~ra~GV~~~~~~~~~~~~~ak~VIlaAGai~SP~LLl~SGIG~ 267 (532)
T TIGR01810 196 ARAYLHPAMKRPNLEVQTRAFVTKINFEGNRATGVEFKKGGRKEHTEANKEVILSAGAINSPQLLQLSGIGD 267 (532)
T ss_pred HHHHhhhhccCCCeEEEeCCEEEEEEecCCeEEEEEEEeCCcEEEEEEeeeEEEccCCCCCHHHHHhcCCCC
Confidence 34455555567789999999999998666554443321 222 3589999999997 4446677777743
No 350
>PRK06617 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=97.41 E-value=0.00037 Score=74.97 Aligned_cols=34 Identities=24% Similarity=0.344 Sum_probs=31.3
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
|+||+|||||++|+++|..|++. +.+|+|+|+.+
T Consensus 1 ~~dV~IvGgG~~Gl~~A~~L~~~--G~~v~l~E~~~ 34 (374)
T PRK06617 1 MSNTVILGCGLSGMLTALSFAQK--GIKTTIFESKS 34 (374)
T ss_pred CccEEEECCCHHHHHHHHHHHcC--CCeEEEecCCC
Confidence 67999999999999999999987 89999999864
No 351
>COG3486 IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.39 E-value=0.00044 Score=71.42 Aligned_cols=197 Identities=18% Similarity=0.235 Sum_probs=103.7
Q ss_pred ccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccc-cccCCCCcccccccc
Q psy8791 464 FRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPM-KSVLPSGATWVKDKI 542 (706)
Q Consensus 464 ~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~-~~l~~~~~~~~~~~~ 542 (706)
++..+|++.||.|++-++.|..+.... +.++..+|+.+.+.|-|+... .-..++.|. |.|+
T Consensus 2 ~~~~~DliGIG~GPfNL~LA~ll~e~~-~~~~lFLerkp~F~WHpGmll------egstlQv~FlkDLV----------- 63 (436)
T COG3486 2 MAEVLDLIGIGIGPFNLSLAALLEEHS-GLKSLFLERKPDFSWHPGMLL------EGSTLQVPFLKDLV----------- 63 (436)
T ss_pred CCcceeeEEEccCchHHHHHHHhcccc-CcceEEEecCCCCCcCCCccc------CCccccccchhhhc-----------
Confidence 345789999999999999999988762 377899999999887774311 111222221 1111
Q ss_pred cccCCCceEEEeeecceecCCCcccccCccccccc-c------ccc-ccccccchhhhcc---CCcEE--EeceEE---E
Q psy8791 543 VSFDSSYTFTILILHSIVEPTDDHYYQPMFTLIGG-G------MKK-LSDSRRPMKSVLP---SGATW--VKDKIV---S 606 (706)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~-~~~~~~~~~~~~~---~gv~~--~~~~v~---~ 606 (706)
++.+|...+-+ + +|+.. + ... ..-.+..+.++.. .+... +..+|+ +
T Consensus 64 ---------------Tl~~PTs~ySF--L-NYL~~h~RLy~Fl~~e~f~i~R~Ey~dY~~Waa~~l~~~rfg~~V~~i~~ 125 (436)
T COG3486 64 ---------------TLVDPTSPYSF--L-NYLHEHGRLYEFLNYETFHIPRREYNDYCQWAASQLPSLRFGEEVTDISS 125 (436)
T ss_pred ---------------cccCCCCchHH--H-HHHHHcchHhhhhhhhcccccHHHHHHHHHHHHhhCCccccCCeeccccc
Confidence 12233222110 0 11110 0 000 0001122222222 12222 456677 5
Q ss_pred EEcCCCe---EEcCCCcEEeeCEEEEecCcccCccCC-CCchhhhcccccccccc-cCccchhhhccC-ccEEEE--cHH
Q psy8791 607 FDPENNR---VRTQAGSEISYEYMIVASGIQMYYDRV-KGGTTSLEDRGKMRGVS-DGFSTVTWEQKH-KQYQLV--SPE 678 (706)
Q Consensus 607 id~~~~~---V~~~~g~~i~yd~lViAtGs~~~~p~i-~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~-k~vvVi--G~E 678 (706)
+|.+... +.+.+++.+.++.|||++|.+|.+|+. ..+.. + +-++ +.+.....+... ++|+|| |--
T Consensus 126 ~~~d~~~~~~~~t~~~~~y~ar~lVlg~G~~P~IP~~f~~l~~--~-----~vfHss~~~~~~~~~~~~~~V~ViG~GQS 198 (436)
T COG3486 126 LDGDAVVRLFVVTANGTVYRARNLVLGVGTQPYIPPCFRSLIG--E-----RVFHSSEYLERHPELLQKRSVTVIGSGQS 198 (436)
T ss_pred cCCcceeEEEEEcCCCcEEEeeeEEEccCCCcCCChHHhCcCc--c-----ceeehHHHHHhhHHhhcCceEEEEcCCcc
Confidence 5555442 566777899999999999999998842 22110 0 1112 222222222233 349999 555
Q ss_pred HHHHHHHHHhhhhhhh--ccccccccc
Q psy8791 679 IRAKAYDLTKRKMKKE--AQWIRFQEK 703 (706)
Q Consensus 679 ~A~~l~~~~~~~~~~~--~~~~~~~~~ 703 (706)
.|..+.++..+--.+. -.||.+...
T Consensus 199 AAEi~~~Ll~~~~~~~~~l~witR~~g 225 (436)
T COG3486 199 AAEIFLDLLNSQPPQDYQLNWITRSSG 225 (436)
T ss_pred HHHHHHHHHhCCCCcCccceeeeccCC
Confidence 5666666665544444 577766543
No 352
>KOG2852|consensus
Probab=97.38 E-value=0.00051 Score=67.32 Aligned_cols=65 Identities=12% Similarity=0.024 Sum_probs=42.7
Q ss_pred chhHHHHHHHHHHhC-CceEEcCCceEEEeCCCCEEEEEeCC----CceEEeecEEEECCCCCchhhhhcC
Q psy8791 265 SPFYAEKIHDILIGR-GVDVHKGKALVEIDLANKEAVFKSED----KTERLPYAIMHVTPPMGPVPELATS 330 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~-gV~v~~~~~v~~i~~~~~~v~~~~~~----~g~~i~~D~vI~a~G~~~~~~~~~~ 330 (706)
|..+...+.+..+++ ||+++.| .|.++..+.+++..+... .....+.+.+|+++|-+...++...
T Consensus 146 P~lFc~~i~sea~k~~~V~lv~G-kv~ev~dEk~r~n~v~~ae~~~ti~~~d~~~ivvsaGPWTskllp~~ 215 (380)
T KOG2852|consen 146 PYLFCHFILSEAEKRGGVKLVFG-KVKEVSDEKHRINSVPKAEAEDTIIKADVHKIVVSAGPWTSKLLPFT 215 (380)
T ss_pred HHHHHHHHHHHHHhhcCeEEEEe-eeEEeecccccccccchhhhcCceEEeeeeEEEEecCCCchhhcccc
Confidence 345666666665554 5999998 577886444444332221 2456788999999999988665543
No 353
>PRK11883 protoporphyrinogen oxidase; Reviewed
Probab=97.34 E-value=0.00019 Score=79.40 Aligned_cols=37 Identities=27% Similarity=0.490 Sum_probs=32.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
++|+|||||+|||+||+.|++...+++|+|+|++++.
T Consensus 1 ~~v~IVGaGiaGL~aA~~L~~~G~~~~V~vlEa~~~~ 37 (451)
T PRK11883 1 KKVAIIGGGITGLSAAYRLHKKGPDADITLLEASDRL 37 (451)
T ss_pred CeEEEECCCHHHHHHHHHHHHhCCCCCEEEEEcCCCC
Confidence 4799999999999999999998334899999999863
No 354
>PF06039 Mqo: Malate:quinone oxidoreductase (Mqo); InterPro: IPR006231 The membrane-associated enzyme, malate:quinone-oxidoreductase, is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle. The reduction of a quinone rather than NAD+ makes the reaction essentially irreversible in the direction of malate oxidation to oxaloacetate. Both forms of malate dehydrogenase are active in Escherichia coli; disruption of this form causes less phenotypic change. In some bacteria, this form is the only or the more important malate dehydrogenase []. ; GO: 0008924 malate dehydrogenase (quinone) activity, 0006099 tricarboxylic acid cycle, 0055114 oxidation-reduction process
Probab=97.31 E-value=0.0023 Score=67.76 Aligned_cols=78 Identities=15% Similarity=0.202 Sum_probs=57.3
Q ss_pred hhHHHHHHHHHHhC-CceEEcCCceEEEeCCCCE---EEEEeC--CCceEEeecEEEECCCCCchhhhhcCCC--CCCCC
Q psy8791 266 PFYAEKIHDILIGR-GVDVHKGKALVEIDLANKE---AVFKSE--DKTERLPYAIMHVTPPMGPVPELATSRL--VDQSG 337 (706)
Q Consensus 266 ~~~~~~~~~~l~~~-gV~v~~~~~v~~i~~~~~~---v~~~~~--~~g~~i~~D~vI~a~G~~~~~~~~~~~l--~~~~G 337 (706)
..+.+.+.+.+++. |++++++++|+.|+..++. |.+... .+..++.++.|++..|-..-+.+.++|+ ...-|
T Consensus 181 G~LTr~l~~~l~~~~~~~~~~~~eV~~i~r~~dg~W~v~~~~~~~~~~~~v~a~FVfvGAGG~aL~LLqksgi~e~~gyg 260 (488)
T PF06039_consen 181 GALTRQLVEYLQKQKGFELHLNHEVTDIKRNGDGRWEVKVKDLKTGEKREVRAKFVFVGAGGGALPLLQKSGIPEGKGYG 260 (488)
T ss_pred HHHHHHHHHHHHhCCCcEEEecCEeCeeEECCCCCEEEEEEecCCCCeEEEECCEEEECCchHhHHHHHHcCChhhcccC
Confidence 56777777778777 9999999999999865432 333222 2446899999999999998899999887 22334
Q ss_pred ceeeCc
Q psy8791 338 YVNVDK 343 (706)
Q Consensus 338 ~i~vd~ 343 (706)
..+|..
T Consensus 261 gfPVsG 266 (488)
T PF06039_consen 261 GFPVSG 266 (488)
T ss_pred CCcccc
Confidence 455555
No 355
>PRK07208 hypothetical protein; Provisional
Probab=97.28 E-value=0.00028 Score=78.77 Aligned_cols=58 Identities=12% Similarity=0.058 Sum_probs=43.4
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCE-EEEEe--CCCc--eEEeecEEEECCCCC
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKE-AVFKS--EDKT--ERLPYAIMHVTPPMG 322 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~-v~~~~--~~~g--~~i~~D~vI~a~G~~ 322 (706)
...+.+.+.+.+++.|++++++++|++|..+++. +..+. .++| .++.+|.||+|++..
T Consensus 217 ~~~l~~~L~~~l~~~g~~i~~~~~V~~I~~~~~~~v~~~~~~~~~g~~~~~~ad~VI~a~p~~ 279 (479)
T PRK07208 217 PGQLWETAAEKLEALGGKVVLNAKVVGLHHDGDGRIAVVVVNDTDGTEETVTADQVISSMPLR 279 (479)
T ss_pred cchHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCcEEEEEEEEcCCCCEEEEEcCEEEECCCHH
Confidence 4578888889999999999999999999876543 32222 2234 368899999998753
No 356
>PLN02268 probable polyamine oxidase
Probab=97.26 E-value=0.00027 Score=77.81 Aligned_cols=35 Identities=29% Similarity=0.482 Sum_probs=32.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
++|+|||||++||+||+.|.+. |++|+|+|++++.
T Consensus 1 ~~VvVIGaGisGL~aA~~L~~~--g~~v~vlEa~~r~ 35 (435)
T PLN02268 1 PSVIVIGGGIAGIAAARALHDA--SFKVTLLESRDRI 35 (435)
T ss_pred CCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCCC
Confidence 4799999999999999999998 8999999999973
No 357
>PRK08013 oxidoreductase; Provisional
Probab=97.26 E-value=0.00029 Score=76.60 Aligned_cols=58 Identities=7% Similarity=0.012 Sum_probs=43.2
Q ss_pred hhHHHHHHHHHHhC-CceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGR-GVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~-gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
..+.+.+.+.+.+. ||+++.++++++++.++..+.+. ..+|+++.+|+||-|-|....
T Consensus 111 ~~l~~~L~~~~~~~~~v~i~~~~~v~~i~~~~~~v~v~-~~~g~~i~a~lvVgADG~~S~ 169 (400)
T PRK08013 111 SVIHYALWQKAQQSSDITLLAPAELQQVAWGENEAFLT-LKDGSMLTARLVVGADGANSW 169 (400)
T ss_pred HHHHHHHHHHHhcCCCcEEEcCCeeEEEEecCCeEEEE-EcCCCEEEeeEEEEeCCCCcH
Confidence 34556666666664 89999999999997665555443 347888999999999998754
No 358
>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Probab=97.26 E-value=0.0003 Score=76.01 Aligned_cols=56 Identities=2% Similarity=0.000 Sum_probs=40.2
Q ss_pred HHHHHHHHHHh-CCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 268 YAEKIHDILIG-RGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 268 ~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
+...+.+.+.+ .|++++.++++++++.+++.+.+ +.++|.++.+|+||-|.|..+.
T Consensus 112 l~~~L~~~~~~~~~i~i~~~~~v~~~~~~~~~~~v-~~~~g~~~~~~lvIgADG~~S~ 168 (384)
T PRK08849 112 IQLGLWQQFAQYPNLTLMCPEKLADLEFSAEGNRV-TLESGAEIEAKWVIGADGANSQ 168 (384)
T ss_pred HHHHHHHHHHhCCCeEEECCCceeEEEEcCCeEEE-EECCCCEEEeeEEEEecCCCch
Confidence 33344444444 47999999999999766555544 3457889999999999998765
No 359
>PLN02661 Putative thiazole synthesis
Probab=97.22 E-value=0.001 Score=69.11 Aligned_cols=37 Identities=27% Similarity=0.357 Sum_probs=31.7
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.+||+|||||++|+.||..|++. ++.+|+|||++...
T Consensus 92 ~~DVlIVGaG~AGl~AA~~La~~-~g~kV~viEk~~~~ 128 (357)
T PLN02661 92 DTDVVIVGAGSAGLSCAYELSKN-PNVKVAIIEQSVSP 128 (357)
T ss_pred cCCEEEECCHHHHHHHHHHHHHc-CCCeEEEEecCccc
Confidence 46999999999999999999863 46899999986543
No 360
>TIGR02360 pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase. Members of this family are the enzyme 4-hydroxybenzoate 3-monooxygenase, also called p-hydroxybenzoate hydroxylase. It converts 4-hydroxybenzoate + NADPH + molecular oxygen to protocatechuate + NADPH + water. It contains monooxygenase (pfam01360) and FAD binding (pfam01494) domains. Pathways that contain this enzyme include the protocatechuate 4,5-degradation pathway.
Probab=97.22 E-value=0.00033 Score=75.84 Aligned_cols=35 Identities=14% Similarity=0.280 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
.++|+|||||++|+++|..|++. |++|+|||+.+.
T Consensus 2 ~~dV~IVGaG~aGl~~A~~L~~~--G~~v~viE~~~~ 36 (390)
T TIGR02360 2 KTQVAIIGAGPSGLLLGQLLHKA--GIDNVILERQSR 36 (390)
T ss_pred CceEEEECccHHHHHHHHHHHHC--CCCEEEEECCCC
Confidence 46899999999999999999998 999999999984
No 361
>PRK07538 hypothetical protein; Provisional
Probab=97.22 E-value=0.00072 Score=73.84 Aligned_cols=34 Identities=24% Similarity=0.470 Sum_probs=31.1
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
+||+|||||+||+++|..|++. +.+|+|+|+.+.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~--G~~v~v~E~~~~ 34 (413)
T PRK07538 1 MKVLIAGGGIGGLTLALTLHQR--GIEVVVFEAAPE 34 (413)
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCcEEEEEcCCc
Confidence 4899999999999999999998 899999999764
No 362
>PF06100 Strep_67kDa_ant: Streptococcal 67 kDa myosin-cross-reactive antigen like family ; InterPro: IPR010354 Members of this family are thought to have structural features in common with the beta chain of the class II antigens, as well as myosin, and may play an important role in the pathogenesis [].
Probab=97.21 E-value=0.00079 Score=72.02 Aligned_cols=37 Identities=24% Similarity=0.310 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhh--cCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSK--LGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~--~~~~~Vtlie~~~~ 66 (706)
++++=|||+|.|+|+||.+|-|. .|+-+|+++|+.+.
T Consensus 2 ~~~AyivGsGiAsLAAAvfLIrDa~~pg~nIhIlE~~~~ 40 (500)
T PF06100_consen 2 NKKAYIVGSGIASLAAAVFLIRDAKMPGENIHILEELDV 40 (500)
T ss_pred CceEEEECCCHHHHHhhhhhhccCCCCccceEEEeCCCC
Confidence 56889999999999999999886 47889999998774
No 363
>COG0445 GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning]
Probab=97.20 E-value=0.00023 Score=76.02 Aligned_cols=104 Identities=20% Similarity=0.278 Sum_probs=67.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC----cccccc-----------cCccccC----cccc---
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ----PMFTLI-----------GGGMKKL----SDSR--- 87 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~----p~~~~~-----------~~~~~~~----~~~~--- 87 (706)
.+||+|||||.||+.||...+|. |+++.|+.-+...... |+.... .+|.... ..+.
T Consensus 4 ~~DVIVIGgGHAG~EAA~AaARm--G~ktlLlT~~~dtig~msCNPaIGG~~KG~lvrEIDALGG~Mg~~~D~~~IQ~r~ 81 (621)
T COG0445 4 EYDVIVIGGGHAGVEAALAAARM--GAKTLLLTLNLDTIGEMSCNPAIGGPGKGHLVREIDALGGLMGKAADKAGIQFRM 81 (621)
T ss_pred CCceEEECCCccchHHHHhhhcc--CCeEEEEEcCCCceeecccccccCCcccceeEEeehhccchHHHhhhhcCCchhh
Confidence 48999999999999999999999 8999999876542111 221100 0110000 0000
Q ss_pred ----------------------ccccccc-C-CCcEEEEceeEEEEcCCC----EEEeCCCeEEEecEEEEccccc
Q psy8791 88 ----------------------RPMKSVL-P-SGATWVKDKIVSFDPENN----RVRTQAGSEISYEYMIVASGIQ 135 (706)
Q Consensus 88 ----------------------~~~~~~~-~-~~v~~i~~~v~~id~~~~----~v~~~~g~~~~yd~lviAtG~~ 135 (706)
...++.+ . .++.++++.|+++..++. -|.+.+|..+.++.+|++||.-
T Consensus 82 LN~sKGPAVra~RaQaDk~~Y~~~mk~~le~~~NL~l~q~~v~dli~e~~~~v~GV~t~~G~~~~a~aVVlTTGTF 157 (621)
T COG0445 82 LNSSKGPAVRAPRAQADKWLYRRAMKNELENQPNLHLLQGEVEDLIVEEGQRVVGVVTADGPEFHAKAVVLTTGTF 157 (621)
T ss_pred ccCCCcchhcchhhhhhHHHHHHHHHHHHhcCCCceehHhhhHHHhhcCCCeEEEEEeCCCCeeecCEEEEeeccc
Confidence 0011111 1 578888899998776443 3678899999999999999963
No 364
>TIGR00562 proto_IX_ox protoporphyrinogen oxidase. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end.
Probab=97.20 E-value=0.00035 Score=77.61 Aligned_cols=38 Identities=21% Similarity=0.439 Sum_probs=34.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcC--CCeEEEEcCCCCc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLG--KGQVSIVEPTDDH 67 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~--~~~Vtlie~~~~~ 67 (706)
+++|+|||||++||+||++|+++.+ |++|+|+|+++..
T Consensus 2 ~~~v~VIGaGiaGL~aA~~L~~~~~~~g~~v~vlE~~~r~ 41 (462)
T TIGR00562 2 KKHVVIIGGGISGLCAAYYLEKEIPELPVELTLVEASDRV 41 (462)
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCCCCCcEEEEEcCCcC
Confidence 4689999999999999999999755 7999999999863
No 365
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=97.16 E-value=0.00039 Score=54.26 Aligned_cols=31 Identities=23% Similarity=0.393 Sum_probs=27.6
Q ss_pred ccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 472 VVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 472 IIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
|||||.+|+++|..|++. +.+|+|+|+++..
T Consensus 1 IiGaG~sGl~aA~~L~~~--g~~v~v~E~~~~~ 31 (68)
T PF13450_consen 1 IIGAGISGLAAAYYLAKA--GYRVTVFEKNDRL 31 (68)
T ss_dssp EES-SHHHHHHHHHHHHT--TSEEEEEESSSSS
T ss_pred CEeeCHHHHHHHHHHHHC--CCcEEEEecCccc
Confidence 799999999999999998 8899999998764
No 366
>PRK06475 salicylate hydroxylase; Provisional
Probab=97.14 E-value=0.0012 Score=71.84 Aligned_cols=35 Identities=29% Similarity=0.351 Sum_probs=31.5
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.+|+|||||+||+++|..|++. +.+|+|+|+.+..
T Consensus 3 ~~V~IvGgGiaGl~~A~~L~~~--G~~V~i~E~~~~~ 37 (400)
T PRK06475 3 GSPLIAGAGVAGLSAALELAAR--GWAVTIIEKAQEL 37 (400)
T ss_pred CcEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCcc
Confidence 4799999999999999999987 8999999987653
No 367
>TIGR02360 pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase. Members of this family are the enzyme 4-hydroxybenzoate 3-monooxygenase, also called p-hydroxybenzoate hydroxylase. It converts 4-hydroxybenzoate + NADPH + molecular oxygen to protocatechuate + NADPH + water. It contains monooxygenase (pfam01360) and FAD binding (pfam01494) domains. Pathways that contain this enzyme include the protocatechuate 4,5-degradation pathway.
Probab=97.14 E-value=0.00097 Score=72.16 Aligned_cols=34 Identities=15% Similarity=0.282 Sum_probs=31.5
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
+||+|||||++|+++|..|++. +.+|+|||+.+.
T Consensus 3 ~dV~IVGaG~aGl~~A~~L~~~--G~~v~viE~~~~ 36 (390)
T TIGR02360 3 TQVAIIGAGPSGLLLGQLLHKA--GIDNVILERQSR 36 (390)
T ss_pred ceEEEECccHHHHHHHHHHHHC--CCCEEEEECCCC
Confidence 5899999999999999999998 899999999774
No 368
>PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed
Probab=97.13 E-value=0.00047 Score=73.41 Aligned_cols=47 Identities=21% Similarity=0.161 Sum_probs=39.6
Q ss_pred CccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCCCC
Q psy8791 342 DKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNRAL 392 (706)
Q Consensus 342 d~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~~~ 392 (706)
++ +|+....||+|++|.+..+. -...|..||-.++.|+...+.|++.
T Consensus 322 ~~-~l~~k~~~~l~~AGqi~g~~---Gy~ea~a~G~~Ag~n~~~~~~g~~~ 368 (436)
T PRK05335 322 DP-TLQLKKRPNLFFAGQITGVE---GYVESAASGLLAGINAARLALGKEP 368 (436)
T ss_pred ch-hccccCCCCEEeeeeecCch---HHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 44 89988899999999988762 2347899999999999999999876
No 369
>PRK07538 hypothetical protein; Provisional
Probab=97.13 E-value=0.00042 Score=75.71 Aligned_cols=34 Identities=26% Similarity=0.533 Sum_probs=31.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
++|+|||||+||+++|..|++. |++|+|||+.+.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~--G~~v~v~E~~~~ 34 (413)
T PRK07538 1 MKVLIAGGGIGGLTLALTLHQR--GIEVVVFEAAPE 34 (413)
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCcEEEEEcCCc
Confidence 4899999999999999999998 999999999874
No 370
>PLN02985 squalene monooxygenase
Probab=97.12 E-value=0.00055 Score=76.44 Aligned_cols=38 Identities=18% Similarity=0.410 Sum_probs=34.6
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 26 SSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 26 ~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
..+..+||+|||||++|+++|..|++. |++|+|+|+.+
T Consensus 39 ~~~~~~DViIVGAG~aGlalA~aLa~~--G~~V~vlEr~~ 76 (514)
T PLN02985 39 RKDGATDVIIVGAGVGGSALAYALAKD--GRRVHVIERDL 76 (514)
T ss_pred CcCCCceEEEECCCHHHHHHHHHHHHc--CCeEEEEECcC
Confidence 455678999999999999999999998 89999999975
No 371
>PRK08243 4-hydroxybenzoate 3-monooxygenase; Validated
Probab=97.11 E-value=0.00049 Score=74.61 Aligned_cols=35 Identities=14% Similarity=0.269 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
+++|+|||||++|+++|..|++. |++|+|+|+.+.
T Consensus 2 ~~dV~IvGaGpaGl~~A~~L~~~--G~~v~v~E~~~~ 36 (392)
T PRK08243 2 RTQVAIIGAGPAGLLLGQLLHLA--GIDSVVLERRSR 36 (392)
T ss_pred cceEEEECCCHHHHHHHHHHHhc--CCCEEEEEcCCc
Confidence 46899999999999999999998 999999999984
No 372
>PTZ00367 squalene epoxidase; Provisional
Probab=97.10 E-value=0.00058 Score=76.74 Aligned_cols=38 Identities=21% Similarity=0.374 Sum_probs=34.1
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 26 SSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 26 ~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
.++.++||+|||||++|+++|..|++. |++|+|+|+.+
T Consensus 29 ~~~~~~dViIVGaGiaGlalA~aLar~--G~~V~VlEr~~ 66 (567)
T PTZ00367 29 RTNYDYDVIIVGGSIAGPVLAKALSKQ--GRKVLMLERDL 66 (567)
T ss_pred ccccCccEEEECCCHHHHHHHHHHHhc--CCEEEEEcccc
Confidence 334568999999999999999999998 89999999976
No 373
>PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase
Probab=97.09 E-value=0.00097 Score=75.62 Aligned_cols=36 Identities=22% Similarity=0.244 Sum_probs=32.9
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
.++.+|+|||||.+|+++|..|++. +.+|+|+|+.+
T Consensus 79 ~~~~~VlIVGgGIaGLalAlaL~r~--Gi~V~V~Er~~ 114 (668)
T PLN02927 79 KKKSRVLVAGGGIGGLVFALAAKKK--GFDVLVFEKDL 114 (668)
T ss_pred cCCCCEEEECCCHHHHHHHHHHHhc--CCeEEEEeccc
Confidence 4568999999999999999999998 89999999865
No 374
>PRK06617 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=97.09 E-value=0.00052 Score=73.87 Aligned_cols=57 Identities=7% Similarity=0.099 Sum_probs=41.2
Q ss_pred hhHHHHHHHHHHhC-CceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGR-GVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~-gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
+.+.+.+.+.+.+. +++++.++++.++..+++.+.+. .+++ ++.+|+||-|-|....
T Consensus 104 ~~L~~~L~~~~~~~~~v~~~~~~~v~~i~~~~~~v~v~-~~~~-~~~adlvIgADG~~S~ 161 (374)
T PRK06617 104 SDFKKILLSKITNNPLITLIDNNQYQEVISHNDYSIIK-FDDK-QIKCNLLIICDGANSK 161 (374)
T ss_pred HHHHHHHHHHHhcCCCcEEECCCeEEEEEEcCCeEEEE-EcCC-EEeeCEEEEeCCCCch
Confidence 45666677777665 48899999999987655555543 3344 8999999999998654
No 375
>COG0578 GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=97.08 E-value=0.0019 Score=70.52 Aligned_cols=65 Identities=3% Similarity=-0.155 Sum_probs=50.1
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEe---CCCc--eEEeecEEEECCCCCchhhhhcC
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKS---EDKT--ERLPYAIMHVTPPMGPVPELATS 330 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~---~~~g--~~i~~D~vI~a~G~~~~~~~~~~ 330 (706)
+..+.-.......+.|-++++.++|+++..+++ +..+. ..+| .++.++.||-|+|.+...++...
T Consensus 163 daRLv~~~a~~A~~~Ga~il~~~~v~~~~re~~-v~gV~~~D~~tg~~~~ira~~VVNAaGpW~d~i~~~~ 232 (532)
T COG0578 163 DARLVAANARDAAEHGAEILTYTRVESLRREGG-VWGVEVEDRETGETYEIRARAVVNAAGPWVDEILEMA 232 (532)
T ss_pred hHHHHHHHHHHHHhcccchhhcceeeeeeecCC-EEEEEEEecCCCcEEEEEcCEEEECCCccHHHHHHhh
Confidence 456677777888889999999999999988876 43332 2233 35889999999999999777655
No 376
>PRK08243 4-hydroxybenzoate 3-monooxygenase; Validated
Probab=97.08 E-value=0.0015 Score=70.82 Aligned_cols=35 Identities=14% Similarity=0.250 Sum_probs=31.9
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
++||+|||||++|+++|..|++. +.+|+|+|+.+.
T Consensus 2 ~~dV~IvGaGpaGl~~A~~L~~~--G~~v~v~E~~~~ 36 (392)
T PRK08243 2 RTQVAIIGAGPAGLLLGQLLHLA--GIDSVVLERRSR 36 (392)
T ss_pred cceEEEECCCHHHHHHHHHHHhc--CCCEEEEEcCCc
Confidence 46899999999999999999998 899999999774
No 377
>PTZ00367 squalene epoxidase; Provisional
Probab=97.07 E-value=0.0017 Score=72.96 Aligned_cols=43 Identities=21% Similarity=0.264 Sum_probs=36.5
Q ss_pred ecCCCcccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 458 WNGPGVFRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 458 ~~~~~~~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
..++...+..+||+|||||.+|+++|..|++. +.+|+|+|+++
T Consensus 24 ~~~~~~~~~~~dViIVGaGiaGlalA~aLar~--G~~V~VlEr~~ 66 (567)
T PTZ00367 24 RFKPARTNYDYDVIIVGGSIAGPVLAKALSKQ--GRKVLMLERDL 66 (567)
T ss_pred ccCccccccCccEEEECCCHHHHHHHHHHHhc--CCEEEEEcccc
Confidence 33555555678999999999999999999987 89999999865
No 378
>KOG1276|consensus
Probab=97.07 E-value=0.00066 Score=70.34 Aligned_cols=38 Identities=21% Similarity=0.290 Sum_probs=35.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..++|+|||||.+||++|++|+++.++..|||+|..++
T Consensus 10 ~~~~vaVvGGGiSGL~aay~L~r~~p~~~i~l~Ea~~R 47 (491)
T KOG1276|consen 10 SGMTVAVVGGGISGLCAAYYLARLGPDVTITLFEASPR 47 (491)
T ss_pred ecceEEEECCchhHHHHHHHHHhcCCCceEEEEecCCc
Confidence 45799999999999999999999988889999999987
No 379
>KOG0685|consensus
Probab=97.07 E-value=0.00084 Score=70.74 Aligned_cols=40 Identities=28% Similarity=0.499 Sum_probs=33.7
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 26 SSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 26 ~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
......+|||||||.|||+||.+|-+. ...+++|+|..++
T Consensus 17 ~~~~~~kIvIIGAG~AGLaAA~rLle~-gf~~~~IlEa~dR 56 (498)
T KOG0685|consen 17 KARGNAKIVIIGAGIAGLAAATRLLEN-GFIDVLILEASDR 56 (498)
T ss_pred hccCCceEEEECCchHHHHHHHHHHHh-CCceEEEEEeccc
Confidence 334456999999999999999999976 3568999999996
No 380
>PRK12266 glpD glycerol-3-phosphate dehydrogenase; Reviewed
Probab=97.06 E-value=0.00064 Score=76.03 Aligned_cols=66 Identities=8% Similarity=-0.122 Sum_probs=48.3
Q ss_pred CchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEE--EeCCCc--eEEeecEEEECCCCCchhhhhc
Q psy8791 264 PSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVF--KSEDKT--ERLPYAIMHVTPPMGPVPELAT 329 (706)
Q Consensus 264 ~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~--~~~~~g--~~i~~D~vI~a~G~~~~~~~~~ 329 (706)
.+..+...+.+...+.|++++.+++|.++..+++.+.+ ....+| .++.++.||.|+|.+.+.++..
T Consensus 153 d~~rl~~~l~~~A~~~Ga~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~i~a~~VVnAaG~wa~~l~~~ 222 (508)
T PRK12266 153 DDARLVVLNARDAAERGAEILTRTRVVSARRENGLWHVTLEDTATGKRYTVRARALVNAAGPWVKQFLDD 222 (508)
T ss_pred CHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEEcCCCCEEEEEcCEEEECCCccHHHHHhh
Confidence 34666667777788899999999999999766554322 221123 4789999999999998876543
No 381
>PRK06475 salicylate hydroxylase; Provisional
Probab=97.05 E-value=0.00059 Score=74.19 Aligned_cols=59 Identities=8% Similarity=0.096 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHHh-CCceEEcCCceEEEeCCCCEEEE--EeCCCceEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIG-RGVDVHKGKALVEIDLANKEAVF--KSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~~v~~--~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
..+.+.+.+.+.+ .|++++.+++|++++.+++.+.+ ...++++++.+|+||-|-|....
T Consensus 107 ~~l~~~L~~~~~~~~~i~v~~~~~v~~~~~~~~~v~v~~~~~~~~~~~~adlvIgADG~~S~ 168 (400)
T PRK06475 107 ADLQSALLDACRNNPGIEIKLGAEMTSQRQTGNSITATIIRTNSVETVSAAYLIACDGVWSM 168 (400)
T ss_pred HHHHHHHHHHHHhcCCcEEEECCEEEEEecCCCceEEEEEeCCCCcEEecCEEEECCCccHh
Confidence 3566666766655 48999999999999876555443 33345568999999999998764
No 382
>PRK12416 protoporphyrinogen oxidase; Provisional
Probab=97.05 E-value=0.00058 Score=75.82 Aligned_cols=52 Identities=12% Similarity=0.204 Sum_probs=38.8
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCC
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPP 320 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G 320 (706)
..+.+.+.+.+.+ ++++++++|++|+.+++.+.+. +.+|+++.+|.||+|+.
T Consensus 226 ~~l~~~l~~~l~~--~~i~~~~~V~~I~~~~~~~~v~-~~~g~~~~ad~VI~a~p 277 (463)
T PRK12416 226 STIIDRLEEVLTE--TVVKKGAVTTAVSKQGDRYEIS-FANHESIQADYVVLAAP 277 (463)
T ss_pred HHHHHHHHHhccc--ccEEcCCEEEEEEEcCCEEEEE-ECCCCEEEeCEEEECCC
Confidence 4556666666644 6899999999998776665443 34677899999999985
No 383
>PRK08850 2-octaprenyl-6-methoxyphenol hydroxylase; Validated
Probab=97.04 E-value=0.00064 Score=74.08 Aligned_cols=33 Identities=24% Similarity=0.551 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPT 64 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~ 64 (706)
.++|+|||||++|+++|..|++. |++|+|||+.
T Consensus 4 ~~dV~IvGaG~~Gl~~A~~L~~~--G~~v~viE~~ 36 (405)
T PRK08850 4 SVDVAIIGGGMVGLALAAALKES--DLRIAVIEGQ 36 (405)
T ss_pred cCCEEEECccHHHHHHHHHHHhC--CCEEEEEcCC
Confidence 46999999999999999999998 9999999996
No 384
>TIGR02733 desat_CrtD C-3',4' desaturase CrtD. Members of this family are slr1293, a carotenoid biosynthesis protein which was shown to be the C-3',4' desaturase (CrtD) of myxoxanthophyll biosynthesis in Synechocystis sp. strain PCC 6803, and close homologs (presumed to be functionally equivalent) from other cyanobacteria, where myxoxanthophyll biosynthesis is either known or expected. This enzyme can act on neurosporene and so presumably catalyzes the first step that is committed to myxoxanthophyll.
Probab=97.04 E-value=0.0006 Score=76.32 Aligned_cols=58 Identities=10% Similarity=0.088 Sum_probs=45.1
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCc-----eEEeecEEEECCCCC
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKT-----ERLPYAIMHVTPPMG 322 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g-----~~i~~D~vI~a~G~~ 322 (706)
...+.+.+.+.+++.|++|+++++|++|..+++.+..+...++ +++.+|.||.++...
T Consensus 231 ~~~l~~aL~~~~~~~G~~i~~~~~V~~I~~~~~~~~gv~~~~~~~~~~~~~~ad~VI~~~~~~ 293 (492)
T TIGR02733 231 MQTLSDRLVEALKRDGGNLLTGQRVTAIHTKGGRAGWVVVVDSRKQEDLNVKADDVVANLPPQ 293 (492)
T ss_pred HHHHHHHHHHHHHhcCCEEeCCceEEEEEEeCCeEEEEEEecCCCCceEEEECCEEEECCCHH
Confidence 5778899999999999999999999999876554322222232 678999999998763
No 385
>PLN02576 protoporphyrinogen oxidase
Probab=97.03 E-value=0.00069 Score=75.96 Aligned_cols=39 Identities=31% Similarity=0.354 Sum_probs=33.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
..+++|+|||||++||+||++|++.. |++|+|+|++++.
T Consensus 10 ~~~~~v~IIGaGisGL~aA~~L~~~~-g~~v~vlEa~~rv 48 (496)
T PLN02576 10 ASSKDVAVVGAGVSGLAAAYALASKH-GVNVLVTEARDRV 48 (496)
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHhc-CCCEEEEecCCCC
Confidence 34578999999999999999999863 5899999999863
No 386
>TIGR00031 UDP-GALP_mutase UDP-galactopyranose mutase. The gene is known as glf, ceoA, and rfbD. It is known experimentally in E. coli, Mycobacterium tuberculosis, and Klebsiella pneumoniae.
Probab=97.02 E-value=0.00072 Score=71.80 Aligned_cols=34 Identities=24% Similarity=0.442 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
+||+|||||++|+++|.+|++. |.+|+|+|+++.
T Consensus 2 ~DvvIIGaG~aGlsaA~~La~~--G~~V~viEk~~~ 35 (377)
T TIGR00031 2 FDYIIVGAGLSGIVLANILAQL--NKRVLVVEKRNH 35 (377)
T ss_pred CcEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCC
Confidence 5899999999999999999987 899999999875
No 387
>COG1635 THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism]
Probab=97.01 E-value=0.00034 Score=66.03 Aligned_cols=34 Identities=24% Similarity=0.288 Sum_probs=31.7
Q ss_pred cccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 469 HLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 469 ~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
||+|+|||++||+||+.|.++ +.+|+|+|++.++
T Consensus 32 DViIVGaGPsGLtAAyyLAk~--g~kV~i~E~~ls~ 65 (262)
T COG1635 32 DVIIVGAGPSGLTAAYYLAKA--GLKVAIFERKLSF 65 (262)
T ss_pred cEEEECcCcchHHHHHHHHhC--CceEEEEEeeccc
Confidence 899999999999999999998 8999999997654
No 388
>TIGR01989 COQ6 Ubiquinone biosynthesis mono0xygenase COQ6. This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone
Probab=97.00 E-value=0.00063 Score=74.80 Aligned_cols=33 Identities=30% Similarity=0.602 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHh----hcCCCeEEEEcCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTS----KLGKGQVSIVEPTD 65 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~----~~~~~~Vtlie~~~ 65 (706)
+||+|||||++|+++|..|++ . |++|+|||+++
T Consensus 1 ~DV~IVGaGp~Gl~~A~~La~~~~~~--G~~v~viE~~~ 37 (437)
T TIGR01989 1 FDVVIVGGGPVGLALAAALGNNPLTK--DLKVLLLDAVD 37 (437)
T ss_pred CcEEEECCcHHHHHHHHHHhcCcccC--CCeEEEEeCCC
Confidence 489999999999999999998 5 89999999965
No 389
>PLN02487 zeta-carotene desaturase
Probab=97.00 E-value=0.00095 Score=74.91 Aligned_cols=57 Identities=12% Similarity=-0.052 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCC---C--EEEEEeC---CCceEEeecEEEECCCCC
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLAN---K--EAVFKSE---DKTERLPYAIMHVTPPMG 322 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~---~--~v~~~~~---~~g~~i~~D~vI~a~G~~ 322 (706)
..+.+.+.+.|+++|++|+++++|++|..++ + .++.+.. .+++++++|.||++++..
T Consensus 295 ~~l~~pl~~~L~~~Gg~V~l~~~V~~I~~~~~~~g~~~v~gv~~~~~~~~~~~~aD~VV~A~p~~ 359 (569)
T PLN02487 295 VRLSGPIAKYITDRGGRFHLRWGCREILYDKSPDGETYVTGLKVSKATEKEIVKADAYVAACDVP 359 (569)
T ss_pred HHHHHHHHHHHHHcCCEEEeCCceEEEEEecCCCCceeEEEEEEecCCCceEEECCEEEECCCHH
Confidence 3588899999999999999999999997642 2 2333332 345678999999998854
No 390
>PRK01747 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Reviewed
Probab=96.95 E-value=0.0022 Score=74.46 Aligned_cols=34 Identities=29% Similarity=0.521 Sum_probs=31.1
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
.+||+|||||.+|+++|..|.++ +.+|+|+|++.
T Consensus 260 ~~dVvIIGaGIaG~s~A~~La~~--G~~V~VlE~~~ 293 (662)
T PRK01747 260 ARDAAIIGGGIAGAALALALARR--GWQVTLYEADE 293 (662)
T ss_pred CCCEEEECccHHHHHHHHHHHHC--CCeEEEEecCC
Confidence 36899999999999999999998 78999999864
No 391
>PF12831 FAD_oxidored: FAD dependent oxidoreductase; PDB: 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 2GAG_A 2GAH_A.
Probab=96.95 E-value=0.00031 Score=76.85 Aligned_cols=34 Identities=29% Similarity=0.370 Sum_probs=27.5
Q ss_pred cccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 469 HLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 469 ~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
||||||||+||++||..+++. +.+|+|||+.+..
T Consensus 1 DVVVvGgG~aG~~AAi~AAr~--G~~VlLiE~~~~l 34 (428)
T PF12831_consen 1 DVVVVGGGPAGVAAAIAAARA--GAKVLLIEKGGFL 34 (428)
T ss_dssp EEEEE--SHHHHHHHHHHHHT--TS-EEEE-SSSSS
T ss_pred CEEEECccHHHHHHHHHHHHC--CCEEEEEECCccC
Confidence 799999999999999999998 8999999997764
No 392
>PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase
Probab=96.94 E-value=0.00087 Score=75.98 Aligned_cols=36 Identities=28% Similarity=0.354 Sum_probs=32.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
....+|+|||||+|||++|..|+++ |++|+|+|+.+
T Consensus 79 ~~~~~VlIVGgGIaGLalAlaL~r~--Gi~V~V~Er~~ 114 (668)
T PLN02927 79 KKKSRVLVAGGGIGGLVFALAAKKK--GFDVLVFEKDL 114 (668)
T ss_pred cCCCCEEEECCCHHHHHHHHHHHhc--CCeEEEEeccc
Confidence 3457999999999999999999999 99999999975
No 393
>PRK13369 glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.90 E-value=0.0011 Score=74.33 Aligned_cols=66 Identities=6% Similarity=-0.130 Sum_probs=48.6
Q ss_pred CCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCC-Cc--eEEeecEEEECCCCCchhhhh
Q psy8791 263 FPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSED-KT--ERLPYAIMHVTPPMGPVPELA 328 (706)
Q Consensus 263 ~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~-~g--~~i~~D~vI~a~G~~~~~~~~ 328 (706)
..+..+...+.+..++.|++++.+++|.++..+++.+.+...+ .| .++.++.||.|+|.+......
T Consensus 152 vd~~rl~~~l~~~a~~~Ga~i~~~~~V~~i~~~~~~~~v~~~~~~g~~~~i~a~~VVnAaG~wa~~l~~ 220 (502)
T PRK13369 152 VDDARLVVLNALDAAERGATILTRTRCVSARREGGLWRVETRDADGETRTVRARALVNAAGPWVTDVIH 220 (502)
T ss_pred ecHHHHHHHHHHHHHHCCCEEecCcEEEEEEEcCCEEEEEEEeCCCCEEEEEecEEEECCCccHHHHHh
Confidence 3456677777778889999999999999987766543322111 12 368999999999999886655
No 394
>TIGR02731 phytoene_desat phytoene desaturase. Plants and cyanobacteria (and, supposedly, Chlorobium tepidum) have a conserved pathway from two molecules geranylgeranyl-PP to one of all-trans-lycopene. Members of this family are the enzyme pytoene desaturase (also called phytoene dehydrogenase). This model does not include the region of the chloroplast transit peptide in plants. A closely related family, excluded by this model, is zeta-carotene desaturase, another enzyme in the same pathway.
Probab=96.88 E-value=0.00095 Score=73.90 Aligned_cols=56 Identities=20% Similarity=0.171 Sum_probs=41.3
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeC-CCCEEEEEeCCCce-----EEeecEEEECCCC
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDL-ANKEAVFKSEDKTE-----RLPYAIMHVTPPM 321 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~-~~~~v~~~~~~~g~-----~i~~D~vI~a~G~ 321 (706)
..+.+.+.+.|++.|++|+++++|++|.. +++.++.+.+.+|+ ++.+|.||+|++.
T Consensus 213 ~~l~~~l~~~l~~~g~~i~l~~~V~~I~~~~~~~v~~v~~~~~~~~~~~~~~a~~VI~a~p~ 274 (453)
T TIGR02731 213 ERLCQPIVDYITSRGGEVRLNSRLKEIVLNEDGSVKHFVLADGEGQRRFEVTADAYVSAMPV 274 (453)
T ss_pred HHHHHHHHHHHHhcCCEEeCCCeeEEEEECCCCCEEEEEEecCCCCceeEEECCEEEEcCCH
Confidence 56778888889999999999999999963 33334322332333 7899999999854
No 395
>PF01946 Thi4: Thi4 family; PDB: 1RP0_A 3FPZ_B 3JSK_K.
Probab=96.87 E-value=0.0008 Score=64.03 Aligned_cols=36 Identities=22% Similarity=0.369 Sum_probs=29.4
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.+||+|||||+||++||+.|.+. +.+|++||++...
T Consensus 17 ~~DV~IVGaGpaGl~aA~~La~~--g~kV~v~E~~~~~ 52 (230)
T PF01946_consen 17 EYDVAIVGAGPAGLTAAYYLAKA--GLKVAVIERKLSP 52 (230)
T ss_dssp EESEEEE--SHHHHHHHHHHHHH--TS-EEEEESSSS-
T ss_pred cCCEEEECCChhHHHHHHHHHHC--CCeEEEEecCCCC
Confidence 46999999999999999999998 8999999987654
No 396
>PTZ00139 Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
Probab=96.85 E-value=0.0011 Score=75.71 Aligned_cols=57 Identities=23% Similarity=0.314 Sum_probs=43.0
Q ss_pred ccccccccccccccCCCC----CCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 8 PLKSYNLLSSSFSTSPLS----SSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~----~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
+.-+||.+.+.|-..-+. ......||||||||.|||+||..+++. |.+|+||||.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~DVlVIG~G~AGl~AAi~Aa~~--G~~V~lveK~~~ 63 (617)
T PTZ00139 3 AVPAFNRLTRTFFSGHLSSAYPVIDHTYDAVVVGAGGAGLRAALGLVEL--GYKTACISKLFP 63 (617)
T ss_pred cchhhhccccccccchhhhcccccccccCEEEECccHHHHHHHHHHHHc--CCcEEEEeccCC
Confidence 445677777766443322 122357999999999999999999988 899999999754
No 397
>PRK08255 salicylyl-CoA 5-hydroxylase; Reviewed
Probab=96.81 E-value=0.0012 Score=77.50 Aligned_cols=36 Identities=25% Similarity=0.384 Sum_probs=33.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
++|+|||||+|||++|..|++..++++|+|+|+++.
T Consensus 1 m~V~IIGaGpAGLaaAi~L~~~~~G~~V~vlEr~~~ 36 (765)
T PRK08255 1 MRIVCIGGGPAGLYFALLMKLLDPAHEVTVVERNRP 36 (765)
T ss_pred CeEEEECCCHHHHHHHHHHHHhCCCCeEEEEecCCC
Confidence 489999999999999999999866899999999885
No 398
>TIGR02730 carot_isom carotene isomerase. Members of this family, including sll0033 (crtH) of Synechocystis sp. PCC 6803, catalyze a cis-trans isomerization of carotenes to the all-trans lycopene, a reaction that can also occur non-enzymatically in light through photoisomerization.
Probab=96.81 E-value=0.0012 Score=73.86 Aligned_cols=60 Identities=17% Similarity=0.019 Sum_probs=49.5
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
...+.+.+.+.++++|++++.+++|++|..+++.+..+.+.+|+++++|.||+++|....
T Consensus 228 ~~~l~~~L~~~~~~~G~~i~~~~~V~~I~~~~~~~~gv~~~~g~~~~ad~vV~a~~~~~~ 287 (493)
T TIGR02730 228 VGQIAESLVKGLEKHGGQIRYRARVTKIILENGKAVGVKLADGEKIYAKRIVSNATRWDT 287 (493)
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCeeeEEEecCCcEEEEEeCCCCEEEcCEEEECCChHHH
Confidence 356888889999999999999999999987666565556667888999999999887543
No 399
>PRK06481 fumarate reductase flavoprotein subunit; Validated
Probab=96.79 E-value=0.0016 Score=72.94 Aligned_cols=61 Identities=8% Similarity=0.111 Sum_probs=45.0
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEe--CCCc--eEEeecEEEECCC-CCchhh
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKS--EDKT--ERLPYAIMHVTPP-MGPVPE 326 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~--~~~g--~~i~~D~vI~a~G-~~~~~~ 326 (706)
..+.+.+.+.+++.||+++++++++++..+++.|+.+. .+++ .++.+|.||+|+| +.+|+.
T Consensus 190 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~g~V~Gv~~~~~~g~~~~i~a~~VVlAtGG~~~n~~ 255 (506)
T PRK06481 190 GYLVDGLLKNVQERKIPLFVNADVTKITEKDGKVTGVKVKINGKETKTISSKAVVVTTGGFGANKD 255 (506)
T ss_pred HHHHHHHHHHHHHcCCeEEeCCeeEEEEecCCEEEEEEEEeCCCeEEEEecCeEEEeCCCcccCHH
Confidence 45677788888999999999999999987655443221 1232 4689999999997 676643
No 400
>PRK08294 phenol 2-monooxygenase; Provisional
Probab=96.78 E-value=0.0037 Score=71.70 Aligned_cols=39 Identities=26% Similarity=0.325 Sum_probs=33.0
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
...+||+|||||++|+++|..|++. .+.+++|||+.+..
T Consensus 30 ~~~~dVlIVGAGPaGL~lA~~Lar~-~Gi~v~IiE~~~~~ 68 (634)
T PRK08294 30 PDEVDVLIVGCGPAGLTLAAQLSAF-PDITTRIVERKPGR 68 (634)
T ss_pred CCCCCEEEECCCHHHHHHHHHHhcC-CCCcEEEEEcCCCC
Confidence 3467999999999999999999983 27899999987653
No 401
>PF00890 FAD_binding_2: FAD binding domain of the Pfam family.; InterPro: IPR003953 In bacteria two distinct, membrane-bound, enzyme complexes are responsible for the interconversion of fumarate and succinate (1.3.99.1 from EC): fumarate reductase (Frd) is used in anaerobic growth, and succinate dehydrogenase (Sdh) is used in aerobic growth. Both complexes consist of two main components: a membrane-extrinsic component composed of a FAD-binding flavoprotein and an iron-sulphur protein; and an hydrophobic component composed of a membrane anchor protein and/or a cytochrome B. In eukaryotes mitochondrial succinate dehydrogenase (ubiquinone) (1.3.5.1 from EC) is an enzyme composed of two subunits: a FAD flavoprotein and and iron-sulphur protein. The flavoprotein subunit is a protein of about 60 to 70 Kd to which FAD is covalently bound to a histidine residue which is located in the N-terminal section of the protein []. The sequence around that histidine is well conserved in Frd and Sdh from various bacterial and eukaryotic species []. This family includes members that bind FAD such as the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase. ; GO: 0009055 electron carrier activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2BS4_A 2BS3_A 2BS2_A 1E7P_J 1QLB_A 1KNR_A 1KNP_A 1CHU_A 2E5V_A 3AEF_A ....
Probab=96.77 E-value=0.0013 Score=71.94 Aligned_cols=60 Identities=10% Similarity=0.003 Sum_probs=43.2
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeC---CCce--EEeecEEEECCCCCch
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSE---DKTE--RLPYAIMHVTPPMGPV 324 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~---~~g~--~i~~D~vI~a~G~~~~ 324 (706)
.+.+...+.+.++++|++++.+++++++..++++|+.+.. .+|+ ++.++.||+|+|-...
T Consensus 140 g~~~~~~l~~~~~~~gv~i~~~~~~~~Li~e~g~V~Gv~~~~~~~g~~~~i~A~aVIlAtGG~~~ 204 (417)
T PF00890_consen 140 GKALIEALAKAAEEAGVDIRFNTRVTDLITEDGRVTGVVAENPADGEFVRIKAKAVILATGGFGG 204 (417)
T ss_dssp HHHHHHHHHHHHHHTTEEEEESEEEEEEEEETTEEEEEEEEETTTCEEEEEEESEEEE----BGG
T ss_pred HHHHHHHHHHHHhhcCeeeeccceeeeEEEeCCceeEEEEEECCCCeEEEEeeeEEEeccCcccc
Confidence 3567788889999999999999999999876666543322 3455 5789999999987765
No 402
>PRK07121 hypothetical protein; Validated
Probab=96.77 E-value=0.0019 Score=72.21 Aligned_cols=36 Identities=28% Similarity=0.402 Sum_probs=33.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
...||||||||.||++||.++++. |.+|+||||.+.
T Consensus 19 ~~~DVvVVGaG~AGl~AA~~aae~--G~~VillEK~~~ 54 (492)
T PRK07121 19 DEADVVVVGFGAAGACAAIEAAAA--GARVLVLERAAG 54 (492)
T ss_pred CccCEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCCC
Confidence 467999999999999999999998 899999999985
No 403
>PRK05732 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=96.76 E-value=0.0015 Score=70.94 Aligned_cols=56 Identities=13% Similarity=0.172 Sum_probs=40.8
Q ss_pred HHHHHHHHHHh-CCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 268 YAEKIHDILIG-RGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 268 ~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
+.+.+.+.+.+ .|++++.+++++++..+++.+.+. +++|.++.+|.||.|.|.+..
T Consensus 114 l~~~l~~~~~~~~g~~~~~~~~v~~i~~~~~~~~v~-~~~g~~~~a~~vI~AdG~~S~ 170 (395)
T PRK05732 114 VGQRLFALLDKAPGVTLHCPARVANVERTQGSVRVT-LDDGETLTGRLLVAADGSHSA 170 (395)
T ss_pred HHHHHHHHHhcCCCcEEEcCCEEEEEEEcCCeEEEE-ECCCCEEEeCEEEEecCCChh
Confidence 44455555554 589999999999987655555443 346778999999999998864
No 404
>PLN02568 polyamine oxidase
Probab=96.75 E-value=0.0017 Score=72.81 Aligned_cols=38 Identities=24% Similarity=0.394 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhc---CCCeEEEEcCCCCc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKL---GKGQVSIVEPTDDH 67 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~---~~~~Vtlie~~~~~ 67 (706)
.++|+|||||.+||+||.+|++.. .+++|+|+|++++.
T Consensus 5 ~~~v~iiGaG~aGl~aa~~L~~~g~~~~~~~v~v~E~~~~~ 45 (539)
T PLN02568 5 KPRIVIIGAGMAGLTAANKLYTSSAANDMFELTVVEGGDRI 45 (539)
T ss_pred CCcEEEECCCHHHHHHHHHHHhcccccCCceEEEEeCCCCc
Confidence 468999999999999999999871 13899999999863
No 405
>PLN02464 glycerol-3-phosphate dehydrogenase
Probab=96.72 E-value=0.0017 Score=74.26 Aligned_cols=68 Identities=6% Similarity=-0.127 Sum_probs=50.4
Q ss_pred CCchhHHHHHHHHHHhCCceEEcCCceEEEeCC--CCEEE---EEeCCCce--EEeecEEEECCCCCchhhhhcC
Q psy8791 263 FPSPFYAEKIHDILIGRGVDVHKGKALVEIDLA--NKEAV---FKSEDKTE--RLPYAIMHVTPPMGPVPELATS 330 (706)
Q Consensus 263 ~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~--~~~v~---~~~~~~g~--~i~~D~vI~a~G~~~~~~~~~~ 330 (706)
..+..+...+.+.+++.|++++.+++|.++..+ ++.+. +....+++ ++.+|.||.|+|.+...+....
T Consensus 229 vdp~rl~~al~~~A~~~Ga~i~~~~~V~~l~~~~~~g~v~gV~v~d~~tg~~~~i~a~~VVnAaGaws~~l~~~~ 303 (627)
T PLN02464 229 MNDSRLNVALACTAALAGAAVLNYAEVVSLIKDESTGRIVGARVRDNLTGKEFDVYAKVVVNAAGPFCDEVRKMA 303 (627)
T ss_pred EcHHHHHHHHHHHHHhCCcEEEeccEEEEEEEecCCCcEEEEEEEECCCCcEEEEEeCEEEECCCHhHHHHHHhc
Confidence 356788888889999999999999999998754 23333 22112333 6899999999999988766544
No 406
>PLN02328 lysine-specific histone demethylase 1 homolog
Probab=96.71 E-value=0.0019 Score=74.67 Aligned_cols=40 Identities=25% Similarity=0.316 Sum_probs=35.3
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 26 SSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 26 ~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
.....++|+|||||++||+||++|.+. |++|+|+|++++.
T Consensus 234 ~~~~~~~v~IiGaG~aGl~aA~~L~~~--g~~v~v~E~~~r~ 273 (808)
T PLN02328 234 EGVEPANVVVVGAGLAGLVAARQLLSM--GFKVVVLEGRARP 273 (808)
T ss_pred CCCCCCCEEEECcCHHHHHHHHHHHHC--CCcEEEEeccccC
Confidence 334567999999999999999999998 8999999999863
No 407
>TIGR00137 gid_trmFO tRNA:m(5)U-54 methyltransferase. This model represents an orthologous set of proteins present in relatively few bacteria but very tightly conserved where it occurs. It is closely related to gidA (glucose-inhibited division protein A), which appears to be present in all complete eubacterial genomes so far and in Saccharomyces cerevisiae. It was designated gid but is now recognized as a tRNA:m(5)U-54 methyltransferase and is now designated trmFO.
Probab=96.70 E-value=0.0016 Score=69.79 Aligned_cols=45 Identities=13% Similarity=0.101 Sum_probs=37.5
Q ss_pred ccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCCCC
Q psy8791 345 TLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNRAL 392 (706)
Q Consensus 345 ~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~~~ 392 (706)
+|+....||+|.+|=...+. --..|..||-+++-|++..+.|++.
T Consensus 323 ~l~~k~~~~lf~AGQi~G~~---GY~Eaaa~Gl~agina~~~~~~~~~ 367 (433)
T TIGR00137 323 SLHFKDRQTLFFAGQLTGVE---GYVASTAGGWLAGINAARLALGEPL 367 (433)
T ss_pred HhccCCCCCEEECcccccch---HHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 78888899999999655542 3457899999999999999999875
No 408
>PLN00128 Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Probab=96.69 E-value=0.0025 Score=72.96 Aligned_cols=49 Identities=31% Similarity=0.311 Sum_probs=38.3
Q ss_pred cccccccCCCCCC----CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 15 LSSSFSTSPLSSS----SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 15 ~~~~~~~~~~~~~----~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
+++.|+|..-..+ ....||||||||.|||+||..+++. |.+|+||||..
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~DVlVIG~G~AGl~AAl~Aae~--G~~VilveK~~ 83 (635)
T PLN00128 31 LSRFFSTGGGRSSYTIVDHTYDAVVVGAGGAGLRAAIGLSEH--GFNTACITKLF 83 (635)
T ss_pred hhhhcccccccccCcceeeecCEEEECccHHHHHHHHHHHhc--CCcEEEEEcCC
Confidence 5566666543311 1346999999999999999999998 89999999975
No 409
>COG2509 Uncharacterized FAD-dependent dehydrogenases [General function prediction only]
Probab=96.69 E-value=0.0076 Score=63.42 Aligned_cols=39 Identities=26% Similarity=0.492 Sum_probs=34.6
Q ss_pred CCcEE-EeceEEEEEcCCC---eEEcCCCcEEeeCEEEEecCc
Q psy8791 595 SGATW-VKDKIVSFDPENN---RVRTQAGSEISYEYMIVASGI 633 (706)
Q Consensus 595 ~gv~~-~~~~v~~id~~~~---~V~~~~g~~i~yd~lViAtGs 633 (706)
.|+++ ++++|+.|+.+.. .|++++|.++.+|+||+|.|.
T Consensus 186 ~G~ei~f~t~VeDi~~~~~~~~~v~~~~g~~i~~~~vvlA~Gr 228 (486)
T COG2509 186 LGGEIRFNTEVEDIEIEDNEVLGVKLTKGEEIEADYVVLAPGR 228 (486)
T ss_pred cCcEEEeeeEEEEEEecCCceEEEEccCCcEEecCEEEEccCc
Confidence 68998 7889999988775 578899999999999999995
No 410
>PLN02612 phytoene desaturase
Probab=96.69 E-value=0.0023 Score=72.46 Aligned_cols=55 Identities=13% Similarity=0.073 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCC-CCEEEEEeCCCceEEeecEEEECCC
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLA-NKEAVFKSEDKTERLPYAIMHVTPP 320 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~-~~~v~~~~~~~g~~i~~D~vI~a~G 320 (706)
..+.+.+.+.|++.|++|+++++|.+|+.+ ++.++.+.+.+|+++++|.||+|++
T Consensus 308 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~v~~~~G~~~~ad~VI~a~p 363 (567)
T PLN02612 308 ERLCMPIVDHFQSLGGEVRLNSRIKKIELNDDGTVKHFLLTNGSVVEGDVYVSATP 363 (567)
T ss_pred HHHHHHHHHHHHhcCCEEEeCCeeeEEEECCCCcEEEEEECCCcEEECCEEEECCC
Confidence 567788888999999999999999999863 3333333344788999999999975
No 411
>PLN02529 lysine-specific histone demethylase 1
Probab=96.68 E-value=0.0021 Score=73.85 Aligned_cols=38 Identities=24% Similarity=0.345 Sum_probs=34.6
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 27 SSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 27 ~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
....++|+|||||++||+||..|+++ |++|+|+|+++.
T Consensus 157 ~~~~~~v~viGaG~aGl~aA~~l~~~--g~~v~v~E~~~~ 194 (738)
T PLN02529 157 EGTEGSVIIVGAGLAGLAAARQLLSF--GFKVVVLEGRNR 194 (738)
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHc--CCcEEEEecCcc
Confidence 34567999999999999999999999 999999999986
No 412
>TIGR02732 zeta_caro_desat carotene 7,8-desaturase. Carotene 7,8-desaturase, also called zeta-carotene desaturase, catalyzes multiple steps in the pathway from geranylgeranyl-PP to all-trans-lycopene in plants and cyanobacteria. A similar enzyme and pathway is found in the green sulfur bacterium Chlorobium tepidum.
Probab=96.68 E-value=0.0016 Score=72.18 Aligned_cols=57 Identities=12% Similarity=0.094 Sum_probs=41.2
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCC---C--EEEEEeCCC---ceEEeecEEEECCCCC
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLAN---K--EAVFKSEDK---TERLPYAIMHVTPPMG 322 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~---~--~v~~~~~~~---g~~i~~D~vI~a~G~~ 322 (706)
..+.+.+.+.|+++|++|+++++|++|..++ + .++.+...+ ++++++|.||+|++..
T Consensus 219 ~~l~~pl~~~L~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~~v~~~~g~~~~~~~aD~VVlA~p~~ 283 (474)
T TIGR02732 219 KYLTKPILEYIEARGGKFHLRHKVREIKYEKSSDGSTRVTGLIMSKPEGKKVIKADAYVAACDVP 283 (474)
T ss_pred hhHHHHHHHHHHHCCCEEECCCEEEEEEEecCCCCceeEEEEEEecCCcceEEECCEEEECCChH
Confidence 3456778899999999999999999997532 1 243222222 2568999999998854
No 413
>KOG2820|consensus
Probab=96.66 E-value=0.0019 Score=64.99 Aligned_cols=37 Identities=22% Similarity=0.260 Sum_probs=32.4
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
.+..+++|||||--|+++|.+|.++ +.+|.++|+.+.
T Consensus 5 ~~~~~viiVGAGVfG~stAyeLaK~--g~killLeqf~~ 41 (399)
T KOG2820|consen 5 VKSRDVIIVGAGVFGLSTAYELAKR--GDKILLLEQFPL 41 (399)
T ss_pred ccceeEEEEcccccchHHHHHHHhc--CCeEEEEeccCC
Confidence 3457899999999999999999998 689999998653
No 414
>PRK08294 phenol 2-monooxygenase; Provisional
Probab=96.66 E-value=0.0018 Score=74.27 Aligned_cols=36 Identities=31% Similarity=0.486 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHh-hcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTS-KLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~-~~~~~~Vtlie~~~~ 66 (706)
.+++|+|||||++||++|..|++ . |.+|+|||+.+.
T Consensus 31 ~~~dVlIVGAGPaGL~lA~~Lar~~--Gi~v~IiE~~~~ 67 (634)
T PRK08294 31 DEVDVLIVGCGPAGLTLAAQLSAFP--DITTRIVERKPG 67 (634)
T ss_pred CCCCEEEECCCHHHHHHHHHHhcCC--CCcEEEEEcCCC
Confidence 46799999999999999999999 5 899999999864
No 415
>TIGR01813 flavo_cyto_c flavocytochrome c. This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton.
Probab=96.63 E-value=0.0019 Score=71.22 Aligned_cols=61 Identities=10% Similarity=0.001 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCC-CCEEEEE--eCCCce--EEeecEEEECCCC-Cchhh
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLA-NKEAVFK--SEDKTE--RLPYAIMHVTPPM-GPVPE 326 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~-~~~v~~~--~~~~g~--~i~~D~vI~a~G~-~~~~~ 326 (706)
..+.+.+.+.+++.|++++.+++++++..+ ++.++.+ ...+++ .+.++.||+|+|- ..|+.
T Consensus 130 ~~l~~~l~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~~~a~~VVlAtGg~~~n~~ 196 (439)
T TIGR01813 130 AEIVQKLYKKAKKEGIDTRLNSKVEDLIQDDQGTVVGVVVKGKGKGIYIKAAKAVVLATGGFGSNKE 196 (439)
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEeeEeEECCCCcEEEEEEEeCCCeEEEEecceEEEecCCCCCCHH
Confidence 567788888999999999999999999754 3333221 122343 4789999999984 44433
No 416
>KOG2614|consensus
Probab=96.63 E-value=0.0021 Score=66.75 Aligned_cols=35 Identities=31% Similarity=0.519 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..+|||||||.+|+++|..|.++ |++|+|+|+...
T Consensus 2 ~~~VvIvGgGI~Gla~A~~l~r~--G~~v~VlE~~e~ 36 (420)
T KOG2614|consen 2 EPKVVIVGGGIVGLATALALHRK--GIDVVVLESRED 36 (420)
T ss_pred CCcEEEECCcHHHHHHHHHHHHc--CCeEEEEeeccc
Confidence 46899999999999999999999 999999999664
No 417
>PRK07208 hypothetical protein; Provisional
Probab=96.63 E-value=0.0015 Score=72.95 Aligned_cols=38 Identities=21% Similarity=0.316 Sum_probs=34.3
Q ss_pred ccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 464 FRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 464 ~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
||++++|+|||||.+|+++|..|+++ +.+|+|+|+++.
T Consensus 1 ~~~~~~vvIiGaGisGL~aA~~L~~~--g~~v~v~E~~~~ 38 (479)
T PRK07208 1 MTNKKSVVIIGAGPAGLTAAYELLKR--GYPVTVLEADPV 38 (479)
T ss_pred CCCCCcEEEECcCHHHHHHHHHHHHC--CCcEEEEecCCC
Confidence 46788999999999999999999997 789999998765
No 418
>COG1233 Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.61 E-value=0.0014 Score=72.96 Aligned_cols=37 Identities=27% Similarity=0.441 Sum_probs=33.6
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
|+++|+||||||++||+||..|++. +.+|+|+|++..
T Consensus 1 ~~~~dvvVIGaG~~GL~aAa~LA~~--G~~V~VlE~~~~ 37 (487)
T COG1233 1 MPMYDVVVIGAGLNGLAAAALLARA--GLKVTVLEKNDR 37 (487)
T ss_pred CCCccEEEECCChhHHHHHHHHHhC--CCEEEEEEecCC
Confidence 3578999999999999999999998 999999998753
No 419
>KOG2844|consensus
Probab=96.61 E-value=0.0027 Score=69.32 Aligned_cols=82 Identities=5% Similarity=-0.117 Sum_probs=65.9
Q ss_pred CCcEEEEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhh
Q psy8791 249 DAAKLTYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELA 328 (706)
Q Consensus 249 ~~~~v~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~ 328 (706)
+++.-.|+.+.+..+.|..+...+....+++|+.|+.++.|++|....+....+++.- ..+++..+|-|+|+++...-+
T Consensus 170 d~v~g~Ly~P~DG~~DP~~lC~ala~~A~~~GA~viE~cpV~~i~~~~~~~~gVeT~~-G~iet~~~VNaaGvWAr~Vg~ 248 (856)
T KOG2844|consen 170 DDVYGGLYSPGDGVMDPAGLCQALARAASALGALVIENCPVTGLHVETDKFGGVETPH-GSIETECVVNAAGVWAREVGA 248 (856)
T ss_pred hHheeeeecCCCcccCHHHHHHHHHHHHHhcCcEEEecCCcceEEeecCCccceeccC-cceecceEEechhHHHHHhhh
Confidence 4456789999999998889999999999999999999999999976554444444433 369999999999999986555
Q ss_pred cCC
Q psy8791 329 TSR 331 (706)
Q Consensus 329 ~~~ 331 (706)
..+
T Consensus 249 m~g 251 (856)
T KOG2844|consen 249 MAG 251 (856)
T ss_pred hcC
Confidence 444
No 420
>PRK06996 hypothetical protein; Provisional
Probab=96.61 E-value=0.0053 Score=66.71 Aligned_cols=36 Identities=19% Similarity=0.480 Sum_probs=30.2
Q ss_pred cccccccCcchhHHHHHHHHHhhc--CCCcEEEECCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRL--GKGQVSIVEPTD 502 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~--~~~~i~vid~~~ 502 (706)
.+||+|||||++|+++|..|++.. .+.+|+|+|+.+
T Consensus 11 ~~dv~IvGgGpaG~~~A~~L~~~g~~~g~~v~l~e~~~ 48 (398)
T PRK06996 11 DFDIAIVGAGPVGLALAGWLARRSATRALSIALIDARE 48 (398)
T ss_pred CCCEEEECcCHHHHHHHHHHhcCCCcCCceEEEecCCC
Confidence 469999999999999999999862 125799999865
No 421
>KOG2311|consensus
Probab=96.57 E-value=0.002 Score=67.53 Aligned_cols=50 Identities=26% Similarity=0.415 Sum_probs=37.8
Q ss_pred ccccccccccccCCCCCCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 10 KSYNLLSSSFSTSPLSSSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
.++...++++.++ +...++|||||||.||..||...+|. |.+-+|+..+-
T Consensus 12 ~s~~~~Rr~~~~s----~~~~~dVvVIGgGHAG~EAAaAaaR~--Ga~TlLlT~~l 61 (679)
T KOG2311|consen 12 TSFPLPRRCVFSS----STSTYDVVVIGGGHAGCEAAAAAARL--GARTLLLTHNL 61 (679)
T ss_pred ccCcchhhhhccc----CCCcccEEEECCCccchHHHHHHHhc--CCceEEeeccc
Confidence 3444444444332 25678999999999999999999998 88888888764
No 422
>PLN02676 polyamine oxidase
Probab=96.56 E-value=0.0027 Score=70.57 Aligned_cols=37 Identities=30% Similarity=0.419 Sum_probs=33.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCC-eEEEEcCCCCc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKG-QVSIVEPTDDH 67 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~-~Vtlie~~~~~ 67 (706)
..++|+|||||++||+||++|++. +. +|+|+|+++..
T Consensus 25 ~~~~v~IIGaG~sGL~aa~~L~~~--g~~~v~vlE~~~~~ 62 (487)
T PLN02676 25 PSPSVIIVGAGMSGISAAKTLSEA--GIEDILILEATDRI 62 (487)
T ss_pred CCCCEEEECCCHHHHHHHHHHHHc--CCCcEEEecCCCCC
Confidence 357899999999999999999998 77 69999999863
No 423
>KOG2853|consensus
Probab=96.54 E-value=0.011 Score=59.60 Aligned_cols=51 Identities=29% Similarity=0.418 Sum_probs=37.2
Q ss_pred cccccccCcchhHHHHHHHHHhhc--CCCcEEEECCCCCCcCCcceEE-eeccccc
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRL--GKGQVSIVEPTDDHYYQPMFTL-IGGGMKK 519 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~--~~~~i~vid~~~~~~~~~~~~~-~~gg~~~ 519 (706)
+-+|||||+|-.|.+.|..|+++. .+.+|+|+|+++. |...-+. -.||.|.
T Consensus 86 ~~dVvIIGGG~~GsS~AfWLKer~rd~gl~VvVVErddt--ytqssT~lSvGGi~Q 139 (509)
T KOG2853|consen 86 HCDVVIIGGGGSGSSTAFWLKERARDEGLNVVVVERDDT--YTQSSTMLSVGGICQ 139 (509)
T ss_pred ccCEEEECCCccchhhHHHHHHHhhcCCceEEEEeccCc--ccccceeeeecceee
Confidence 358999999999999999998763 3479999998664 4444442 3455553
No 424
>KOG0029|consensus
Probab=96.51 E-value=0.002 Score=71.07 Aligned_cols=38 Identities=26% Similarity=0.273 Sum_probs=33.5
Q ss_pred ccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 464 FRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 464 ~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
.+++++|||||||.||++||++|.+. +.+|+|+|..+.
T Consensus 12 ~~~~~~VIVIGAGiaGLsAArqL~~~--G~~V~VLEARdR 49 (501)
T KOG0029|consen 12 AGKKKKVIVIGAGLAGLSAARQLQDF--GFDVLVLEARDR 49 (501)
T ss_pred ccCCCcEEEECCcHHHHHHHHHHHHc--CCceEEEeccCC
Confidence 34567999999999999999999998 889999998764
No 425
>PRK07057 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=96.49 E-value=0.0033 Score=71.64 Aligned_cols=35 Identities=14% Similarity=0.318 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
...||||||||.|||+||..+++. |.+|+|||+..
T Consensus 11 ~~~DVlVIG~G~AGl~AAi~Aa~~--G~~V~vleK~~ 45 (591)
T PRK07057 11 RKFDVVIVGAGGSGMRASLQLARA--GLSVAVLSKVF 45 (591)
T ss_pred ccCCEEEECccHHHHHHHHHHHHC--CCcEEEEeccC
Confidence 346999999999999999999988 89999999964
No 426
>PRK12837 3-ketosteroid-delta-1-dehydrogenase; Provisional
Probab=96.48 E-value=0.0027 Score=71.18 Aligned_cols=34 Identities=32% Similarity=0.441 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..||||||+| |||+||.++++. |.+|+|||+.+.
T Consensus 7 ~~DVvVVG~G-aGl~aA~~aa~~--G~~V~vlEk~~~ 40 (513)
T PRK12837 7 EVDVLVAGSG-GGVAGAYTAARE--GLSVALVEATDK 40 (513)
T ss_pred ccCEEEECch-HHHHHHHHHHHC--CCcEEEEecCCC
Confidence 5799999999 999999999998 899999999875
No 427
>PRK05945 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=96.45 E-value=0.003 Score=71.87 Aligned_cols=37 Identities=30% Similarity=0.474 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..||||||||.|||+||..+++..++.+|+||||...
T Consensus 3 ~~DVlVIG~G~AGl~AAi~aa~~g~g~~V~vleK~~~ 39 (575)
T PRK05945 3 EHDVVIVGGGLAGCRAALEIKRLDPSLDVAVVAKTHP 39 (575)
T ss_pred cccEEEECccHHHHHHHHHHHHhcCCCcEEEEeccCC
Confidence 3689999999999999999998744589999999753
No 428
>PF00732 GMC_oxred_N: GMC oxidoreductase; InterPro: IPR000172 The glucose-methanol-choline (GMC) oxidoreductases are FAD flavoproteins oxidoreductases [, ]. These enzymes include a variety of proteins; choline dehydrogenase (CHD), methanol oxidase (MOX) and cellobiose dehydrogenase (1.1.99.18 from EC) [] which share a number of regions of sequence similarities. One of these regions, located in the N-terminal section, corresponds to the FAD ADP- binding domain. The function of the other conserved domains is not yet known.; GO: 0016614 oxidoreductase activity, acting on CH-OH group of donors, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 3Q9T_B 1B4V_A 3GYJ_A 1CBO_A 1B8S_A 1N4V_A 1N4W_A 3CNJ_A 1IJH_A 2GEW_A ....
Probab=96.40 E-value=0.0026 Score=65.98 Aligned_cols=66 Identities=9% Similarity=-0.005 Sum_probs=45.8
Q ss_pred hHHHHHHHHHHhCCceEEcCCceEEE--eCCCCE---EEEEeCCCc---eEEeecEEEECCCCCch-hhhhcCCC
Q psy8791 267 FYAEKIHDILIGRGVDVHKGKALVEI--DLANKE---AVFKSEDKT---ERLPYAIMHVTPPMGPV-PELATSRL 332 (706)
Q Consensus 267 ~~~~~~~~~l~~~gV~v~~~~~v~~i--~~~~~~---v~~~~~~~g---~~i~~D~vI~a~G~~~~-~~~~~~~l 332 (706)
....++...+++.|++|++++.|.+| +.++++ |.+...+.. ..+.++.||+|.|.-.. .+|..+|+
T Consensus 194 ~~~~~L~~a~~~~n~~l~~~~~V~~i~~~~~~~~a~gV~~~~~~~~~~~~~~~ak~VIlaAGai~Tp~LLl~SGi 268 (296)
T PF00732_consen 194 AATTYLPPALKRPNLTLLTNARVTRIIFDGDGGRATGVEYVDNDGGVQRRIVAAKEVILAAGAIGTPRLLLRSGI 268 (296)
T ss_dssp HHHHHHHHHTTTTTEEEEESEEEEEEEEETTSTEEEEEEEEETTTSEEEEEEEEEEEEE-SHHHHHHHHHHHTTE
T ss_pred hhhcccchhhccCCccEEcCcEEEEEeeeccccceeeeeeeecCCcceeeeccceeEEeccCCCCChhhhccccc
Confidence 34566777776669999999999999 544554 444444333 46778999999997554 56666776
No 429
>PRK07804 L-aspartate oxidase; Provisional
Probab=96.40 E-value=0.0033 Score=70.92 Aligned_cols=36 Identities=25% Similarity=0.329 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
...||||||||.|||+||..+++. +.+|+||||.+.
T Consensus 15 ~~~DVlVIG~G~AGl~AAi~aae~--G~~VilleK~~~ 50 (541)
T PRK07804 15 DAADVVVVGSGVAGLTAALAARRA--GRRVLVVTKAAL 50 (541)
T ss_pred cccCEEEECccHHHHHHHHHHHHc--CCeEEEEEccCC
Confidence 357999999999999999999998 899999999764
No 430
>PRK08641 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=96.40 E-value=0.0033 Score=71.63 Aligned_cols=35 Identities=29% Similarity=0.341 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
+.||||||||.|||+||..+++. |.+|+|||+.+.
T Consensus 3 ~~DVlVVG~G~AGl~AAi~Aa~~--G~~V~lieK~~~ 37 (589)
T PRK08641 3 KGKVIVVGGGLAGLMATIKAAEA--GVHVDLFSLVPV 37 (589)
T ss_pred CccEEEECchHHHHHHHHHHHHc--CCcEEEEEccCC
Confidence 45899999999999999999998 899999997653
No 431
>PRK07573 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=96.37 E-value=0.0038 Score=71.66 Aligned_cols=49 Identities=22% Similarity=0.135 Sum_probs=37.2
Q ss_pred cccccccCCCCC-----CCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 15 LSSSFSTSPLSS-----SSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 15 ~~~~~~~~~~~~-----~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
+.+|..+++... .....||||||||.|||+||..+++. |.+|+|||++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~DVlVVG~G~AGl~AAi~Aae~--G~~VilieK~~ 68 (640)
T PRK07573 15 EEKWDRYKFHLKLVNPANKRKFDVIVVGTGLAGASAAATLGEL--GYNVKVFCYQD 68 (640)
T ss_pred hhhhhhccccccccCCccccccCEEEECccHHHHHHHHHHHHc--CCcEEEEecCC
Confidence 445555544431 11346999999999999999999998 89999999753
No 432
>PRK08275 putative oxidoreductase; Provisional
Probab=96.37 E-value=0.0036 Score=70.93 Aligned_cols=51 Identities=16% Similarity=0.187 Sum_probs=39.4
Q ss_pred CceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCC
Q psy8791 337 GYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNR 390 (706)
Q Consensus 337 G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~ 390 (706)
|.|.||. ..+ |+.|++||+|||+... ......+...|+.++.++...+.+.
T Consensus 357 Ggi~~d~-~~~-t~i~gl~a~Ge~~~~~-~~~~~~~~~~G~~a~~~~~~~~~~~ 407 (554)
T PRK08275 357 SGVWVNE-KAE-TTVPGLYAAGDMASVP-HNYMLGAFTYGWFAGENAAEYVAGR 407 (554)
T ss_pred CcEEECC-CCc-cCCCCEEECcccCCch-hHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6699998 566 8999999999997543 2344567888999999988776543
No 433
>COG1232 HemY Protoporphyrinogen oxidase [Coenzyme metabolism]
Probab=96.37 E-value=0.0029 Score=68.19 Aligned_cols=36 Identities=28% Similarity=0.493 Sum_probs=33.1
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
++|+|||||.+||++|.+|+++.|+.+|+|+|+++.
T Consensus 1 ~~i~IiG~GiaGLsaAy~L~k~~p~~~i~lfE~~~r 36 (444)
T COG1232 1 MKIAIIGGGIAGLSAAYRLQKAGPDVEVTLFEADDR 36 (444)
T ss_pred CeEEEECCcHHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 369999999999999999999988899999999764
No 434
>TIGR00031 UDP-GALP_mutase UDP-galactopyranose mutase. The gene is known as glf, ceoA, and rfbD. It is known experimentally in E. coli, Mycobacterium tuberculosis, and Klebsiella pneumoniae.
Probab=96.34 E-value=0.0029 Score=67.26 Aligned_cols=35 Identities=29% Similarity=0.473 Sum_probs=31.4
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
|+||+|||||+||+++|..|.+. +.+|+|+|+++.
T Consensus 1 ~~DvvIIGaG~aGlsaA~~La~~--G~~V~viEk~~~ 35 (377)
T TIGR00031 1 MFDYIIVGAGLSGIVLANILAQL--NKRVLVVEKRNH 35 (377)
T ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCC
Confidence 57999999999999999999976 789999998654
No 435
>PRK12842 putative succinate dehydrogenase; Reviewed
Probab=96.32 E-value=0.0041 Score=70.79 Aligned_cols=59 Identities=12% Similarity=0.009 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeC--CCce-EEeec-EEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSE--DKTE-RLPYA-IMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~--~~g~-~i~~D-~vI~a~G~~~~ 324 (706)
..+.+.+.+.+++.||+++.++.++++..+++.|+.+.. .+++ .+.++ .||+|+|-.++
T Consensus 214 ~~l~~~L~~~~~~~Gv~i~~~~~v~~l~~~~g~V~GV~~~~~~~~~~i~a~k~VVlAtGg~~~ 276 (574)
T PRK12842 214 NALAARLAKSALDLGIPILTGTPARELLTEGGRVVGARVIDAGGERRITARRGVVLACGGFSH 276 (574)
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEeeCCEEEEEEEEcCCceEEEEeCCEEEEcCCCccc
Confidence 457777888889999999999999998866665443222 2333 47786 79999998775
No 436
>PRK12834 putative FAD-binding dehydrogenase; Reviewed
Probab=96.30 E-value=0.0044 Score=70.16 Aligned_cols=35 Identities=26% Similarity=0.462 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
...||||||+|.|||+||..+++. |.+|+|||+.+
T Consensus 3 ~~~DVvVVG~G~AGl~AAl~Aa~~--G~~VivlEK~~ 37 (549)
T PRK12834 3 MDADVIVVGAGLAGLVAAAELADA--GKRVLLLDQEN 37 (549)
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCC
Confidence 357999999999999999999998 89999999998
No 437
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=96.30 E-value=0.0028 Score=69.17 Aligned_cols=35 Identities=29% Similarity=0.474 Sum_probs=32.0
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
|+||+|||||..|+++|.+|++. +.+|+|+|+++.
T Consensus 1 ~~~vvIIGaG~~G~~~A~~La~~--g~~V~vle~~~~ 35 (410)
T PRK12409 1 MSHIAVIGAGITGVTTAYALAQR--GYQVTVFDRHRY 35 (410)
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCC
Confidence 57999999999999999999997 789999999764
No 438
>KOG2311|consensus
Probab=96.29 E-value=0.0039 Score=65.38 Aligned_cols=36 Identities=25% Similarity=0.445 Sum_probs=31.2
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
...|||||||||+||+.||.+.++. +.+.+++.++-
T Consensus 26 ~~~~dVvVIGgGHAG~EAAaAaaR~--Ga~TlLlT~~l 61 (679)
T KOG2311|consen 26 TSTYDVVVIGGGHAGCEAAAAAARL--GARTLLLTHNL 61 (679)
T ss_pred CCcccEEEECCCccchHHHHHHHhc--CCceEEeeccc
Confidence 4678999999999999999999887 78888887753
No 439
>PLN02815 L-aspartate oxidase
Probab=96.29 E-value=0.0058 Score=69.34 Aligned_cols=36 Identities=25% Similarity=0.421 Sum_probs=31.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
....||||||+|.|||+||..+++. + +|+|||+.+.
T Consensus 27 ~~~~DVlVVG~G~AGl~AAl~Aae~--G-~VvlleK~~~ 62 (594)
T PLN02815 27 TKYFDFLVIGSGIAGLRYALEVAEY--G-TVAIITKDEP 62 (594)
T ss_pred ccccCEEEECccHHHHHHHHHHhhC--C-CEEEEECCCC
Confidence 3457999999999999999999998 7 8999998764
No 440
>PRK06854 adenylylsulfate reductase subunit alpha; Validated
Probab=96.27 E-value=0.0041 Score=71.05 Aligned_cols=45 Identities=11% Similarity=0.113 Sum_probs=35.9
Q ss_pred ccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcC
Q psy8791 343 KATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKN 389 (706)
Q Consensus 343 ~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g 389 (706)
. .++ |+.||+||+|||+......++..+..+|++++.++...+..
T Consensus 389 ~-~~~-T~v~glyA~Ge~~~~~~~~l~~~s~~~g~~ag~~~~~~~~~ 433 (608)
T PRK06854 389 Y-NRM-TTVEGLFAAGDVVGGSPHKFSSGSFAEGRIAAKAAVRYILD 433 (608)
T ss_pred c-ccc-cCCCCEEEeeecCCCCcchhHHHHHHHHHHHHHHHHHHHHh
Confidence 6 566 88999999999986433456677888999999999887754
No 441
>PRK07803 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=96.27 E-value=0.0038 Score=71.60 Aligned_cols=35 Identities=26% Similarity=0.313 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..||||||||.|||+||..+++. |.+|+|||+.+.
T Consensus 8 ~~DVvVIG~G~AGl~AAl~Aae~--G~~V~lieK~~~ 42 (626)
T PRK07803 8 SYDVVVIGAGGAGLRAAIEARER--GLRVAVVCKSLF 42 (626)
T ss_pred eecEEEECcCHHHHHHHHHHHHC--CCCEEEEeccCC
Confidence 46999999999999999999998 899999999753
No 442
>TIGR01812 sdhA_frdA_Gneg succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup. This model represents the succinate dehydrogenase flavoprotein subunit as found in Gram-negative bacteria, mitochondria, and some Archaea. Mitochondrial forms interact with ubiquinone and are designated EC 1.3.5.1, but can be degraded to 1.3.99.1. Some isozymes in E. coli and other species run primarily in the opposite direction and are designated fumarate reductase.
Probab=96.24 E-value=0.0041 Score=70.85 Aligned_cols=33 Identities=18% Similarity=0.305 Sum_probs=30.5
Q ss_pred cEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 32 KLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 32 ~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
||||||||.|||+||..+++. |.+|+||||.+.
T Consensus 1 DVlVVG~G~AGl~AA~~aae~--G~~V~lleK~~~ 33 (566)
T TIGR01812 1 DVVIVGAGLAGLRAAVEAAKA--GLNTAVISKVYP 33 (566)
T ss_pred CEEEECccHHHHHHHHHHHHC--CCcEEEEeccCC
Confidence 699999999999999999998 899999999753
No 443
>PRK06452 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=96.23 E-value=0.0043 Score=70.33 Aligned_cols=34 Identities=26% Similarity=0.372 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
..||||||||.|||+||..+++. |.+|+||||.+
T Consensus 5 ~~DVvVVG~G~AGl~AAl~Aae~--G~~V~lveK~~ 38 (566)
T PRK06452 5 EYDAVVIGGGLAGLMSAHEIASA--GFKVAVISKVF 38 (566)
T ss_pred cCcEEEECccHHHHHHHHHHHHC--CCcEEEEEccC
Confidence 46999999999999999999988 89999999874
No 444
>PRK09231 fumarate reductase flavoprotein subunit; Validated
Probab=96.21 E-value=0.0048 Score=70.17 Aligned_cols=52 Identities=19% Similarity=0.349 Sum_probs=39.0
Q ss_pred CCceeeCccccccCCCCCEEEccccCCCCC-------CchHHHHHHhHHHHHHHHHHHHcC
Q psy8791 336 SGYVNVDKATLQHVKYSNVFAIGDCSNLPT-------SKTAAAVAGQCKVVYDNLSAVMKN 389 (706)
Q Consensus 336 ~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~-------~~~~~~a~~qg~~~a~ni~~~l~g 389 (706)
.|.|.||. ..+ |..|++||+|+|+.... ..+...+.-.|+.++++++..+.+
T Consensus 358 ~GGi~vd~-~~~-t~i~GLyAaGe~~~~g~hGanrlggnsl~~a~v~Gr~Ag~~aa~~~~~ 416 (582)
T PRK09231 358 MGGIETDQ-NCE-TRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEQAAERAAT 416 (582)
T ss_pred CCCEEECC-CCc-cccCCEEecccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHhhhc
Confidence 46799998 566 88999999999975211 123356778999999999887654
No 445
>PRK09078 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=96.18 E-value=0.0047 Score=70.49 Aligned_cols=34 Identities=18% Similarity=0.252 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
..||||||||.|||+||..+++. +.+|+||||..
T Consensus 12 ~~DVvVIG~G~AGl~AAl~Aa~~--G~~V~lveK~~ 45 (598)
T PRK09078 12 KYDVVVVGAGGAGLRATLGMAEA--GLKTACITKVF 45 (598)
T ss_pred ccCEEEECccHHHHHHHHHHHHc--CCcEEEEEccC
Confidence 46999999999999999999998 89999999864
No 446
>TIGR01176 fum_red_Fp fumarate reductase, flavoprotein subunit. The terms succinate dehydrogenase and fumarate reductase may be used interchangeably in certain systems. However, a number of species have distinct complexes, with the fumarate reductase active under anaerobic conditions. This model represents the fumarate reductase flavoprotein subunit from several such species in which a distinct succinate dehydrogenase is also found. Not all bona fide fumarate reductases will be found by this model.
Probab=96.18 E-value=0.0049 Score=69.96 Aligned_cols=37 Identities=19% Similarity=0.241 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..||||||||.|||+||..+++..++.+|+|+||...
T Consensus 3 ~~DVlVIG~G~AGl~AAl~aa~~g~g~~V~lveK~~~ 39 (580)
T TIGR01176 3 QHDIAVIGAGGAGLRAAIAAAEANPHLDVALISKVYP 39 (580)
T ss_pred ceeEEEECccHHHHHHHHHHHHhCCCCcEEEEEccCC
Confidence 4689999999999999999998755689999999753
No 447
>PRK06069 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=96.14 E-value=0.005 Score=70.15 Aligned_cols=35 Identities=26% Similarity=0.398 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCC---CeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGK---GQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~---~~Vtlie~~~~ 66 (706)
..||||||||.|||+||..+++. + .+|+||||.+.
T Consensus 5 ~~DVlVVG~G~AGl~AA~~Aa~~--G~~~~~V~lleK~~~ 42 (577)
T PRK06069 5 KYDVVIVGSGLAGLRAAVAAAER--SGGKLSVAVVSKTQP 42 (577)
T ss_pred ecCEEEECccHHHHHHHHHHHHh--CCCCCcEEEEEcccC
Confidence 46899999999999999999998 5 79999998753
No 448
>COG0029 NadB Aspartate oxidase [Coenzyme metabolism]
Probab=96.14 E-value=0.0067 Score=64.63 Aligned_cols=33 Identities=18% Similarity=0.274 Sum_probs=29.1
Q ss_pred cccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 469 HLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 469 ~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
||+|||+|.|||++|..|.+. .+|+|+.+.+..
T Consensus 9 dV~IiGsG~AGL~~AL~L~~~---~~V~vltk~~~~ 41 (518)
T COG0029 9 DVLIIGSGLAGLTAALSLAPS---FRVTVLTKGPLG 41 (518)
T ss_pred cEEEECCcHHHHHHHHhCCCC---CcEEEEeCCCCC
Confidence 899999999999999999764 799999987654
No 449
>PRK12835 3-ketosteroid-delta-1-dehydrogenase; Reviewed
Probab=96.14 E-value=0.0056 Score=69.63 Aligned_cols=36 Identities=25% Similarity=0.398 Sum_probs=33.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
...||||||+|.|||+||..+++. |.+|+|+|+.+.
T Consensus 10 ~~~DVvVVG~G~AGl~AA~~aae~--G~~VivlEk~~~ 45 (584)
T PRK12835 10 REVDVLVVGSGGGGMTAALTAAAR--GLDTLVVEKSAH 45 (584)
T ss_pred CcCCEEEECccHHHHHHHHHHHHC--CCcEEEEEcCCC
Confidence 357999999999999999999998 899999999985
No 450
>PRK08958 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=96.14 E-value=0.0052 Score=69.92 Aligned_cols=34 Identities=18% Similarity=0.323 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
..||||||||.|||+||..+++. |.+|+|+||..
T Consensus 7 ~~DVlVVG~G~AGl~AAi~Aa~~--G~~V~lleK~~ 40 (588)
T PRK08958 7 EFDAVVIGAGGAGMRAALQISQS--GQSCALLSKVF 40 (588)
T ss_pred ccCEEEECccHHHHHHHHHHHHc--CCcEEEEEccC
Confidence 46899999999999999999988 89999999974
No 451
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.13 E-value=0.0067 Score=67.65 Aligned_cols=79 Identities=16% Similarity=0.145 Sum_probs=53.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCcccccccccccCCCcEEEEceeEEEE
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 109 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~v~~id 109 (706)
.++|+|||+|.+|+++|..|+++ |++|+++|+++.... ... ...+...++++..+....
T Consensus 16 ~~~v~viG~G~~G~~~A~~L~~~--G~~V~~~d~~~~~~~--------------~~~---~~~l~~~gv~~~~~~~~~-- 74 (480)
T PRK01438 16 GLRVVVAGLGVSGFAAADALLEL--GARVTVVDDGDDERH--------------RAL---AAILEALGATVRLGPGPT-- 74 (480)
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCchhhh--------------HHH---HHHHHHcCCEEEECCCcc--
Confidence 46899999999999999999988 899999998762100 000 112233577776543211
Q ss_pred cCCCEEEeCCCeEEEecEEEEccccccccCC
Q psy8791 110 PENNRVRTQAGSEISYEYMIVASGIQMYYDR 140 (706)
Q Consensus 110 ~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~ 140 (706)
....+|.+|+++|..++.+.
T Consensus 75 -----------~~~~~D~Vv~s~Gi~~~~~~ 94 (480)
T PRK01438 75 -----------LPEDTDLVVTSPGWRPDAPL 94 (480)
T ss_pred -----------ccCCCCEEEECCCcCCCCHH
Confidence 12458999999998876543
No 452
>PRK07843 3-ketosteroid-delta-1-dehydrogenase; Reviewed
Probab=96.12 E-value=0.0062 Score=68.97 Aligned_cols=63 Identities=10% Similarity=0.025 Sum_probs=43.8
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeC-CCc--eEEeec-EEEECC-CCCchhhhh
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSE-DKT--ERLPYA-IMHVTP-PMGPVPELA 328 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~-~~g--~~i~~D-~vI~a~-G~~~~~~~~ 328 (706)
..+...+.+.+++.||+++++++++++..++++|+.+.. .++ ..+.++ .||+|+ |+.+|..+.
T Consensus 208 ~~~~~~L~~~~~~~gv~v~~~t~v~~l~~~~g~v~Gv~~~~~g~~~~i~A~~~VIlAtGG~~~n~~m~ 275 (557)
T PRK07843 208 QALAAGLRIGLQRAGVPVLLNTPLTDLYVEDGRVTGVHAAESGEPQLIRARRGVILASGGFEHNEQMR 275 (557)
T ss_pred HHHHHHHHHHHHcCCCEEEeCCEEEEEEEeCCEEEEEEEEeCCcEEEEEeceeEEEccCCcCcCHHHH
Confidence 567778888999999999999999999866555442211 133 357785 577754 677775443
No 453
>PRK12266 glpD glycerol-3-phosphate dehydrogenase; Reviewed
Probab=96.11 E-value=0.0043 Score=69.43 Aligned_cols=38 Identities=29% Similarity=0.439 Sum_probs=34.1
Q ss_pred ccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 464 FRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 464 ~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
|+.++||||||||..|+++|+.|.++ +.+|+|||+++.
T Consensus 3 ~~~~~DVvIIGGGi~G~~~A~~la~r--Gl~V~LvEk~d~ 40 (508)
T PRK12266 3 MMETYDLLVIGGGINGAGIARDAAGR--GLSVLLCEQDDL 40 (508)
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHC--CCeEEEEecCCC
Confidence 44578999999999999999999998 899999999754
No 454
>PRK11883 protoporphyrinogen oxidase; Reviewed
Probab=96.11 E-value=0.0045 Score=68.49 Aligned_cols=37 Identities=22% Similarity=0.473 Sum_probs=31.7
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
++|+|||||.|||+||+.|++..++.+|+|+|+++..
T Consensus 1 ~~v~IVGaGiaGL~aA~~L~~~G~~~~V~vlEa~~~~ 37 (451)
T PRK11883 1 KKVAIIGGGITGLSAAYRLHKKGPDADITLLEASDRL 37 (451)
T ss_pred CeEEEECCCHHHHHHHHHHHHhCCCCCEEEEEcCCCC
Confidence 3699999999999999999997334899999997653
No 455
>TIGR02061 aprA adenosine phosphosulphate reductase, alpha subunit. During dissimilatory sulfate reduction or sulfur oxidation, adenylylsulfate (APS) reductase catalyzes reversibly the two-electron reduction of APS to sulfite and AMP. Found in several bacterial lineages and in Archaeoglobales, APS reductase is a heterodimer composed of an alpha subunit containing a noncovalently bound FAD, and a beta subunit containing two [4Fe-4S] clusters. Described by this model is the alpha subunit of APS reductase, sharing common evolutionary origin with fumarate reductase/succinate dehydrogenase flavoproteins.
Probab=96.07 E-value=0.0057 Score=69.49 Aligned_cols=41 Identities=10% Similarity=0.131 Sum_probs=32.3
Q ss_pred CCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcC
Q psy8791 349 VKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKN 389 (706)
Q Consensus 349 ~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g 389 (706)
|+.|++||+|||+....-.++..+..+|.+++.++...+..
T Consensus 404 T~i~gLyA~Ge~~~~~~h~l~~nsl~eg~~ag~~a~~~~~~ 444 (614)
T TIGR02061 404 TTVEGLFTCGDGVGASPHKFSSGSFTEGRIAAKAAVRWILD 444 (614)
T ss_pred cccCCEEeceecccCcchhhHHhHHHHHHHHHHHHHHHHHh
Confidence 78999999999976432246667778899999998887754
No 456
>PRK12844 3-ketosteroid-delta-1-dehydrogenase; Reviewed
Probab=96.06 E-value=0.0066 Score=68.71 Aligned_cols=35 Identities=29% Similarity=0.375 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..||||||+|.||++||..+++. +.+|+|||+.+.
T Consensus 6 ~~DvvIiG~G~aGl~aA~~~a~~--G~~v~liEk~~~ 40 (557)
T PRK12844 6 TYDVVVVGSGGGGMCAALAAADS--GLEPLIVEKQDK 40 (557)
T ss_pred cCCEEEECcCHHHHHHHHHHHHC--CCcEEEEecCCC
Confidence 57999999999999999999998 899999999875
No 457
>COG0562 Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane]
Probab=96.06 E-value=0.0087 Score=60.05 Aligned_cols=36 Identities=28% Similarity=0.365 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
+.|++|||+|++|+..|..|++. |.+|.|||++++.
T Consensus 1 ~fd~lIVGaGlsG~V~A~~a~~~--gk~VLIvekR~HI 36 (374)
T COG0562 1 MFDYLIVGAGLSGAVIAEVAAQL--GKRVLIVEKRNHI 36 (374)
T ss_pred CCcEEEECCchhHHHHHHHHHHc--CCEEEEEeccccC
Confidence 36899999999999999988888 8999999999973
No 458
>PRK08626 fumarate reductase flavoprotein subunit; Provisional
Probab=96.05 E-value=0.0058 Score=70.35 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..||||||||.|||+||..+++. |.+|+|||+.+.
T Consensus 5 ~~DVlVIG~G~AGl~AAi~Aae~--G~~VivleK~~~ 39 (657)
T PRK08626 5 YTDALVIGAGLAGLRVAIAAAQR--GLDTIVLSLVPA 39 (657)
T ss_pred eccEEEECccHHHHHHHHHHHHc--CCCEEEEeCCCC
Confidence 46999999999999999999998 899999997543
No 459
>PLN03000 amine oxidase
Probab=96.00 E-value=0.013 Score=68.12 Aligned_cols=36 Identities=19% Similarity=0.349 Sum_probs=33.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..++|+|||||++||+||..|++. +++|+|+|++++
T Consensus 183 ~~~~VvIIGaG~aGL~aA~~L~~~--G~~V~VlE~~~r 218 (881)
T PLN03000 183 SKSSVVIVGAGLSGLAAARQLMRF--GFKVTVLEGRKR 218 (881)
T ss_pred CCCCEEEECccHHHHHHHHHHHHC--CCcEEEEEccCc
Confidence 457999999999999999999998 899999999986
No 460
>TIGR00551 nadB L-aspartate oxidase. L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA.
Probab=95.99 E-value=0.0069 Score=67.56 Aligned_cols=34 Identities=32% Similarity=0.547 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..||||||||.|||+||..+++. +. |+||||.+.
T Consensus 2 ~~DVlVVG~G~AGl~AA~~aa~~--G~-V~lleK~~~ 35 (488)
T TIGR00551 2 SCDVVVIGSGAAGLSAALALADQ--GR-VIVLSKAPV 35 (488)
T ss_pred CccEEEECccHHHHHHHHHHHhC--CC-EEEEEccCC
Confidence 36899999999999999999987 66 999999963
No 461
>TIGR00562 proto_IX_ox protoporphyrinogen oxidase. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end.
Probab=95.97 E-value=0.0054 Score=68.10 Aligned_cols=37 Identities=24% Similarity=0.446 Sum_probs=32.6
Q ss_pred cccccccCcchhHHHHHHHHHhhcC--CCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLG--KGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~--~~~i~vid~~~~ 503 (706)
|+||+|||||.||++||..|.+..+ +.+|+|+|+++.
T Consensus 2 ~~~v~VIGaGiaGL~aA~~L~~~~~~~g~~v~vlE~~~r 40 (462)
T TIGR00562 2 KKHVVIIGGGISGLCAAYYLEKEIPELPVELTLVEASDR 40 (462)
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCCCCCcEEEEEcCCc
Confidence 4689999999999999999998755 689999998764
No 462
>KOG2960|consensus
Probab=95.97 E-value=0.0018 Score=60.52 Aligned_cols=35 Identities=29% Similarity=0.415 Sum_probs=32.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
.||||||+|-+||+||+.+.++.|+.+|.+||..-
T Consensus 77 sDvviVGAGSaGLsAAY~I~~~rPdlkvaIIE~SV 111 (328)
T KOG2960|consen 77 SDVVIVGAGSAGLSAAYVIAKNRPDLKVAIIESSV 111 (328)
T ss_pred cceEEECCCccccceeeeeeccCCCceEEEEEeee
Confidence 48999999999999999999888999999999875
No 463
>PRK06175 L-aspartate oxidase; Provisional
Probab=95.95 E-value=0.0068 Score=66.40 Aligned_cols=58 Identities=5% Similarity=-0.048 Sum_probs=40.4
Q ss_pred hhHHHHHHHHHHh-CCceEEcCCceEEEeCCCCEEEEEe-CCCce--EEeecEEEECCCCCc
Q psy8791 266 PFYAEKIHDILIG-RGVDVHKGKALVEIDLANKEAVFKS-EDKTE--RLPYAIMHVTPPMGP 323 (706)
Q Consensus 266 ~~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~~v~~~~-~~~g~--~i~~D~vI~a~G~~~ 323 (706)
+.+.+.+.+.+++ .||+++.++.+.++..+++.+..+. ..+++ .+.++.||+|+|--.
T Consensus 128 ~~l~~~L~~~~~~~~gV~i~~~t~v~~Li~~~~~v~Gv~~~~~g~~~~i~Ak~VILAtGG~~ 189 (433)
T PRK06175 128 KKVEKILLKKVKKRKNITIIENCYLVDIIENDNTCIGAICLKDNKQINIYSKVTILATGGIG 189 (433)
T ss_pred HHHHHHHHHHHHhcCCCEEEECcEeeeeEecCCEEEEEEEEECCcEEEEEcCeEEEccCccc
Confidence 4566777777765 5999999999999865555443211 11333 688999999999744
No 464
>COG0562 Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane]
Probab=95.94 E-value=0.007 Score=60.71 Aligned_cols=36 Identities=31% Similarity=0.410 Sum_probs=32.7
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
|+|++|||||.+|+.+|..+.+. +.+|.|||+.++.
T Consensus 1 ~fd~lIVGaGlsG~V~A~~a~~~--gk~VLIvekR~HI 36 (374)
T COG0562 1 MFDYLIVGAGLSGAVIAEVAAQL--GKRVLIVEKRNHI 36 (374)
T ss_pred CCcEEEECCchhHHHHHHHHHHc--CCEEEEEeccccC
Confidence 68999999999999999988887 8899999998764
No 465
>PRK06263 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=95.91 E-value=0.0071 Score=68.39 Aligned_cols=53 Identities=11% Similarity=0.149 Sum_probs=38.7
Q ss_pred CCceeeCccccccCCCCCEEEccccCCCCCC------chHHHHHHhHHHHHHHHHHHHcCC
Q psy8791 336 SGYVNVDKATLQHVKYSNVFAIGDCSNLPTS------KTAAAVAGQCKVVYDNLSAVMKNR 390 (706)
Q Consensus 336 ~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~------~~~~~a~~qg~~~a~ni~~~l~g~ 390 (706)
.|.+.||. ..| |..|++||+|+|+..... .....+...|+.+++++++.+.+.
T Consensus 348 ~GGi~vd~-~~~-t~IpGLyAaGE~~gg~hG~~rlgG~sl~~a~v~Gr~Ag~~aa~~~~~~ 406 (543)
T PRK06263 348 MGGIRINE-DCE-TNIPGLFACGEVAGGVHGANRLGGNALADTQVFGAIAGKSAAKNAENN 406 (543)
T ss_pred cCCEEECC-CCc-ccCCCeEeccccccCCCCCCccchhhhhhhHHHHHHHHHHHHHHhhhc
Confidence 36689998 567 889999999998643211 123467889999999998876543
No 466
>PRK12416 protoporphyrinogen oxidase; Provisional
Probab=95.86 E-value=0.0067 Score=67.37 Aligned_cols=37 Identities=24% Similarity=0.235 Sum_probs=31.4
Q ss_pred cccccccCcchhHHHHHHHHHhhc----CCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRL----GKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~----~~~~i~vid~~~~ 503 (706)
|++|+|||||.|||+||..|.+.. .+.+|+|+|+++.
T Consensus 1 m~~v~VIGaGisGL~aA~~L~~~~~~~~~~~~V~vlEa~~r 41 (463)
T PRK12416 1 MKTVVVIGGGITGLSTMFYLEKLKKDYNIDLNLILVEKEEY 41 (463)
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhccCCCccEEEEecCCC
Confidence 568999999999999999998752 2368999999865
No 467
>PRK12839 hypothetical protein; Provisional
Probab=95.79 E-value=0.012 Score=66.85 Aligned_cols=37 Identities=32% Similarity=0.451 Sum_probs=33.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
...||+|||+|.+|++||..+++. +.+|+|||+++..
T Consensus 7 ~~~dv~ViG~G~aG~~aa~~~~~~--g~~v~~iek~~~~ 43 (572)
T PRK12839 7 HTYDVVVVGSGAGGLSAAVAAAYG--GAKVLVVEKASTC 43 (572)
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC--CCcEEEEecCCCC
Confidence 457999999999999999999998 8999999998753
No 468
>PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed
Probab=95.78 E-value=0.0069 Score=64.70 Aligned_cols=36 Identities=28% Similarity=0.336 Sum_probs=32.0
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
|+||+|||||++|+.+|..|+++ +.+|+|+|+.+..
T Consensus 2 ~~dVvVIGGGlAGleAAlaLAr~--Gl~V~LiE~rp~~ 37 (436)
T PRK05335 2 MKPVNVIGAGLAGSEAAWQLAKR--GVPVELYEMRPVK 37 (436)
T ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCcEEEEEccCcc
Confidence 45899999999999999999998 8999999976543
No 469
>PRK13369 glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.77 E-value=0.0077 Score=67.44 Aligned_cols=38 Identities=29% Similarity=0.399 Sum_probs=34.0
Q ss_pred ccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 464 FRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 464 ~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
++.++||+|||||..|+++|+.|.++ +.+|+|+|+++.
T Consensus 3 ~~~~~DVvIIGGGi~G~~~A~~la~r--G~~V~LlEk~d~ 40 (502)
T PRK13369 3 EPETYDLFVIGGGINGAGIARDAAGR--GLKVLLCEKDDL 40 (502)
T ss_pred CCcccCEEEECCCHHHHHHHHHHHhC--CCcEEEEECCCC
Confidence 44568999999999999999999998 899999999853
No 470
>PRK12845 3-ketosteroid-delta-1-dehydrogenase; Reviewed
Probab=95.77 E-value=0.015 Score=65.76 Aligned_cols=41 Identities=29% Similarity=0.229 Sum_probs=35.0
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCccc
Q psy8791 26 SSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYY 69 (706)
Q Consensus 26 ~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~ 69 (706)
.....+||||||+| +|++||..+++. |.+|+|||+.+....
T Consensus 12 ~~d~e~DvvvvG~G-~G~~aA~~a~~~--G~~v~v~Ek~~~~GG 52 (564)
T PRK12845 12 VRDTTVDLLVVGSG-TGMAAALAAHEL--GLSVLIVEKSSYVGG 52 (564)
T ss_pred CCCceeCEEEECCc-HHHHHHHHHHHC--CCcEEEEecCCCCcC
Confidence 33456899999999 999999999998 899999999876443
No 471
>KOG1298|consensus
Probab=95.76 E-value=0.011 Score=60.56 Aligned_cols=38 Identities=21% Similarity=0.442 Sum_probs=33.5
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 26 SSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 26 ~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
..+...||+|||||.+|-+.|+.|+|. |-+|.||||.=
T Consensus 41 ~~~~~~DvIIVGAGV~GsaLa~~L~kd--GRrVhVIERDl 78 (509)
T KOG1298|consen 41 RNDGAADVIIVGAGVAGSALAYALAKD--GRRVHVIERDL 78 (509)
T ss_pred ccCCcccEEEECCcchHHHHHHHHhhC--CcEEEEEeccc
Confidence 334557999999999999999999999 89999999974
No 472
>PRK07395 L-aspartate oxidase; Provisional
Probab=95.75 E-value=0.0097 Score=67.19 Aligned_cols=34 Identities=29% Similarity=0.361 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..||||||+|.|||+||..++ . +.+|+||||.+.
T Consensus 9 e~DVlVVG~G~AGl~AAi~A~-~--G~~V~lieK~~~ 42 (553)
T PRK07395 9 QFDVLVVGSGAAGLYAALCLP-S--HLRVGLITKDTL 42 (553)
T ss_pred cCCEEEECccHHHHHHHHHhh-c--CCCEEEEEccCC
Confidence 469999999999999999985 4 789999999764
No 473
>PRK08274 tricarballylate dehydrogenase; Validated
Probab=95.74 E-value=0.0073 Score=67.09 Aligned_cols=37 Identities=24% Similarity=0.321 Sum_probs=32.9
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
+..+||||||+|.||++||..+++. +.+|+|||+.+.
T Consensus 2 ~~~~DVvVVG~G~aGl~AA~~aa~~--G~~V~vlEk~~~ 38 (466)
T PRK08274 2 ASMVDVLVIGGGNAALCAALAAREA--GASVLLLEAAPR 38 (466)
T ss_pred CccCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCC
Confidence 3467999999999999999999987 789999999763
No 474
>PLN02268 probable polyamine oxidase
Probab=95.72 E-value=0.0078 Score=66.23 Aligned_cols=34 Identities=29% Similarity=0.450 Sum_probs=30.7
Q ss_pred cccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 469 HLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 469 ~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
+|+|||||.|||+||+.|++. +.+|+|+|.++..
T Consensus 2 ~VvVIGaGisGL~aA~~L~~~--g~~v~vlEa~~r~ 35 (435)
T PLN02268 2 SVIVIGGGIAGIAAARALHDA--SFKVTLLESRDRI 35 (435)
T ss_pred CEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCCC
Confidence 799999999999999999987 7899999997753
No 475
>PRK02106 choline dehydrogenase; Validated
Probab=95.72 E-value=0.012 Score=66.90 Aligned_cols=66 Identities=11% Similarity=-0.086 Sum_probs=44.3
Q ss_pred HHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeC--CCc--eEEeecEEEECCCCCch-hhhhcCCCCCC
Q psy8791 270 EKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSE--DKT--ERLPYAIMHVTPPMGPV-PELATSRLVDQ 335 (706)
Q Consensus 270 ~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~--~~g--~~i~~D~vI~a~G~~~~-~~~~~~~l~~~ 335 (706)
.++....++.|++|++++.|.+|.-++++++.+.. .++ ..+.++.||+|.|..-. .+|..+|+-+.
T Consensus 205 ~~l~~a~~~~nl~i~~~a~V~rI~~~~~~a~GV~~~~~~~~~~~~~ak~VILaaGai~TP~LLl~SGIG~~ 275 (560)
T PRK02106 205 AYLDPALKRPNLTIVTHALTDRILFEGKRAVGVEYERGGGRETARARREVILSAGAINSPQLLQLSGIGPA 275 (560)
T ss_pred HhhccccCCCCcEEEcCCEEEEEEEeCCeEEEEEEEeCCcEEEEEeeeeEEEccCCCCCHHHHhhcCCCCh
Confidence 34445555678999999999999866554433322 122 24679999999997655 56666787443
No 476
>TIGR01377 soxA_mon sarcosine oxidase, monomeric form. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms
Probab=95.70 E-value=0.0074 Score=65.09 Aligned_cols=34 Identities=29% Similarity=0.453 Sum_probs=30.7
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
+||+|||||.+|+++|..|.++ +.+|+|+|+.+.
T Consensus 1 ~dvvIIGaGi~G~s~A~~La~~--g~~V~l~e~~~~ 34 (380)
T TIGR01377 1 FDVIVVGAGIMGCFAAYHLAKH--GKKTLLLEQFDL 34 (380)
T ss_pred CcEEEECCCHHHHHHHHHHHHC--CCeEEEEeccCC
Confidence 5899999999999999999987 789999998643
No 477
>KOG2960|consensus
Probab=95.67 E-value=0.0044 Score=58.00 Aligned_cols=34 Identities=29% Similarity=0.371 Sum_probs=31.7
Q ss_pred cccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 469 HLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 469 ~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
||||+|+|.||+++|..+.++.|+.+|.+||.+-
T Consensus 78 DvviVGAGSaGLsAAY~I~~~rPdlkvaIIE~SV 111 (328)
T KOG2960|consen 78 DVVIVGAGSAGLSAAYVIAKNRPDLKVAIIESSV 111 (328)
T ss_pred ceEEECCCccccceeeeeeccCCCceEEEEEeee
Confidence 8999999999999999999888999999999753
No 478
>TIGR02352 thiamin_ThiO glycine oxidase ThiO. This family consists of the homotetrameric, FAD-dependent glycine oxidase ThiO, from species such as Bacillus subtilis that use glycine in thiamine biosynthesis. In general, members of this family will not be found in species such as E. coli that instead use tyrosine and the ThiH protein.
Probab=95.66 E-value=0.051 Score=57.37 Aligned_cols=86 Identities=8% Similarity=-0.038 Sum_probs=63.6
Q ss_pred EEEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhcCCC
Q psy8791 253 LTYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELATSRL 332 (706)
Q Consensus 253 v~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~~l 332 (706)
-.++.+......+..+...+.+.+++.|++++.+++|.++..+++.+..+.+++| ++.+|.||+|+|.....+.. ..+
T Consensus 124 ~g~~~~~~g~v~p~~l~~~l~~~~~~~g~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~~~~l~~-~~~ 201 (337)
T TIGR02352 124 GAVFYPDDAHVDPRALLKALEKALEKLGVEIIEHTEVQHIEIRGEKVTAIVTPSG-DVQADQVVLAAGAWAGELLP-LPL 201 (337)
T ss_pred eEEEcCCCceEChHHHHHHHHHHHHHcCCEEEccceEEEEEeeCCEEEEEEcCCC-EEECCEEEEcCChhhhhccc-CCc
Confidence 3445555555557889999999999999999999999999877766665556555 79999999999998876543 333
Q ss_pred CCCCCcee
Q psy8791 333 VDQSGYVN 340 (706)
Q Consensus 333 ~~~~G~i~ 340 (706)
...+|++.
T Consensus 202 ~~~~g~~~ 209 (337)
T TIGR02352 202 RPVRGQPL 209 (337)
T ss_pred cccCceEE
Confidence 44445443
No 479
>COG1053 SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]
Probab=95.63 E-value=0.013 Score=65.75 Aligned_cols=37 Identities=24% Similarity=0.415 Sum_probs=33.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..++||||||||.|||.||..+++. +.+|+|+|+.+.
T Consensus 4 ~~~~DvvVIG~G~AGl~AAi~aa~~--g~~V~l~~K~~~ 40 (562)
T COG1053 4 IHEFDVVVIGGGGAGLRAAIEAAEA--GLKVALLSKAPP 40 (562)
T ss_pred cccCCEEEECCcHHHHHHHHHHHhc--CCcEEEEEcccc
Confidence 3567999999999999999999999 799999998653
No 480
>TIGR01811 sdhA_Bsu succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup. This model represents the succinate dehydrogenase flavoprotein subunit as found in the low-GC Gram-positive bacteria and a few other lineages. This enzyme may act in a complete or partial TCA cycle, or act in the opposite direction as fumarate reductase. In some but not all species, succinate dehydrogenase and fumarate reductase may be encoded as separate isozymes.
Probab=95.62 E-value=0.0093 Score=68.07 Aligned_cols=31 Identities=35% Similarity=0.433 Sum_probs=29.3
Q ss_pred EEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 33 LLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 33 VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
|||||||.|||+||..+++. |.+|+||||.+
T Consensus 1 VlVVG~G~AGl~AAl~Aae~--G~~VilleK~~ 31 (603)
T TIGR01811 1 VIVVGTGLAGGMAAAKLAEL--GYHVKLFSYVD 31 (603)
T ss_pred CEEECccHHHHHHHHHHHHc--CCCEEEEEecC
Confidence 69999999999999999998 89999999986
No 481
>PRK05257 malate:quinone oxidoreductase; Validated
Probab=95.61 E-value=0.0089 Score=66.35 Aligned_cols=39 Identities=13% Similarity=0.256 Sum_probs=34.6
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
+.++||+|||||..|+++|..|.++.++.+|+|+|+.+.
T Consensus 3 ~~~~DVvIIGgGIiG~slA~~L~~~~~g~~V~VlEk~~~ 41 (494)
T PRK05257 3 ESKTDVVLIGGGIMSATLGTLLKELEPEWSITMFERLDG 41 (494)
T ss_pred CccceEEEECcHHHHHHHHHHHHHhCCCCeEEEEEcCCc
Confidence 346799999999999999999998777889999998754
No 482
>KOG2415|consensus
Probab=95.60 E-value=0.0077 Score=62.22 Aligned_cols=37 Identities=27% Similarity=0.381 Sum_probs=31.3
Q ss_pred cccccccCcchhHHHHHHHHHhhc----CCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRL----GKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~----~~~~i~vid~~~~ 503 (706)
-+||+|||||+||++||++|++.. .+.+|.|+|+...
T Consensus 76 ~~Dv~IVG~GPAGLsaAIrlKQla~~~~~dlrVcvvEKaa~ 116 (621)
T KOG2415|consen 76 EVDVVIVGAGPAGLSAAIRLKQLAAKANKDLRVCVVEKAAE 116 (621)
T ss_pred cccEEEECCCchhHHHHHHHHHHHHhcCCceEEEEEeeccc
Confidence 479999999999999999999863 3468999998654
No 483
>TIGR02733 desat_CrtD C-3',4' desaturase CrtD. Members of this family are slr1293, a carotenoid biosynthesis protein which was shown to be the C-3',4' desaturase (CrtD) of myxoxanthophyll biosynthesis in Synechocystis sp. strain PCC 6803, and close homologs (presumed to be functionally equivalent) from other cyanobacteria, where myxoxanthophyll biosynthesis is either known or expected. This enzyme can act on neurosporene and so presumably catalyzes the first step that is committed to myxoxanthophyll.
Probab=95.60 E-value=0.0095 Score=66.68 Aligned_cols=35 Identities=29% Similarity=0.405 Sum_probs=31.7
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
+||||||||.+|++||..|++. +.+|+|+|+++..
T Consensus 2 ~dvvIIGaG~~GL~aa~~La~~--G~~v~vlE~~~~~ 36 (492)
T TIGR02733 2 TSVVVIGAGIAGLTAAALLAKR--GYRVTLLEQHAQP 36 (492)
T ss_pred CeEEEECcCHHHHHHHHHHHHC--CCeEEEEecCCCC
Confidence 4899999999999999999998 8999999998643
No 484
>PTZ00306 NADH-dependent fumarate reductase; Provisional
Probab=95.56 E-value=0.015 Score=71.42 Aligned_cols=37 Identities=41% Similarity=0.611 Sum_probs=33.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
+...||||||||.||++||..+++. |.+|+|+||.+.
T Consensus 407 t~~~DVvVVG~G~AGl~AAi~Aae~--Ga~VivlEK~~~ 443 (1167)
T PTZ00306 407 SLPARVIVVGGGLAGCSAAIEAASC--GAQVILLEKEAK 443 (1167)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHC--CCcEEEEEccCC
Confidence 3457999999999999999999998 899999999865
No 485
>TIGR02734 crtI_fam phytoene desaturase. Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger Pfam family pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis.
Probab=95.54 E-value=0.01 Score=66.58 Aligned_cols=32 Identities=28% Similarity=0.462 Sum_probs=29.8
Q ss_pred ccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 470 LGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 470 ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
|||||||.+||+||..|++. +.+|+|+|+++.
T Consensus 1 vvVIGaG~~GL~aA~~La~~--G~~V~VlE~~~~ 32 (502)
T TIGR02734 1 AVVIGAGFGGLALAIRLAAA--GIPVTVVEQRDK 32 (502)
T ss_pred CEEECcCHHHHHHHHHHHhC--CCcEEEEECCCC
Confidence 68999999999999999997 899999999875
No 486
>PRK06134 putative FAD-binding dehydrogenase; Reviewed
Probab=95.54 E-value=0.018 Score=65.65 Aligned_cols=60 Identities=7% Similarity=-0.067 Sum_probs=44.8
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEE--eCCCce-EEee-cEEEECCCCCch
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFK--SEDKTE-RLPY-AIMHVTPPMGPV 324 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~--~~~~g~-~i~~-D~vI~a~G~~~~ 324 (706)
...+...+.+.+++.|++++.+++++++..+++.++.+ ..+++. ++.+ +.||+|+|-..+
T Consensus 216 g~~l~~~L~~~a~~~Gv~i~~~t~v~~l~~~~g~v~GV~~~~~~~~~~i~a~k~VVlAtGg~~~ 279 (581)
T PRK06134 216 GNALVARLLKSAEDLGVRIWESAPARELLREDGRVAGAVVETPGGLQEIRARKGVVLAAGGFPH 279 (581)
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEEECCcEEEEEeCCEEEEcCCCccc
Confidence 35677888889999999999999999987555554322 122333 5788 999999988776
No 487
>PRK08641 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=95.52 E-value=0.009 Score=68.10 Aligned_cols=37 Identities=24% Similarity=0.173 Sum_probs=32.7
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
|++.||||||+|.||++||..+++. +.+|+||++.+.
T Consensus 1 ~~~~DVlVVG~G~AGl~AAi~Aa~~--G~~V~lieK~~~ 37 (589)
T PRK08641 1 MAKGKVIVVGGGLAGLMATIKAAEA--GVHVDLFSLVPV 37 (589)
T ss_pred CCCccEEEECchHHHHHHHHHHHHc--CCcEEEEEccCC
Confidence 3567999999999999999999887 789999998654
No 488
>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional
Probab=95.46 E-value=0.014 Score=70.07 Aligned_cols=51 Identities=14% Similarity=0.158 Sum_probs=40.3
Q ss_pred CCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcC
Q psy8791 336 SGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKN 389 (706)
Q Consensus 336 ~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g 389 (706)
.|.|.||. ..+ |+.|++||+|||+.... .+...+.-.|+.++.++...+.+
T Consensus 361 ~GGi~vd~-~~~-T~v~GLfAaGE~a~~~~-nsl~~a~v~G~~Ag~~a~~~~~~ 411 (897)
T PRK13800 361 ASGVWVDE-HAR-TTVPGLYAAGDLACVPH-NYMIGAFVFGDLAGAHAAGTLAE 411 (897)
T ss_pred cceEEecC-CCc-ccCCCeEechhccCcch-hhhhhHHHhHHHHHHHHHHHHhc
Confidence 47899998 566 89999999999987542 34456788899999999877643
No 489
>PRK08205 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=95.45 E-value=0.015 Score=66.39 Aligned_cols=33 Identities=18% Similarity=0.375 Sum_probs=29.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
..||||||||.|||+||..+++. .+|+|+||.+
T Consensus 5 ~~DVlVIG~G~AGl~AAl~aa~~---~~VilleK~~ 37 (583)
T PRK08205 5 RYDVVIVGAGGAGMRAAIEAGPR---ARTAVLTKLY 37 (583)
T ss_pred eccEEEECccHHHHHHHHHHHhC---CCEEEEeCCC
Confidence 46999999999999999999864 7999999864
No 490
>PRK09077 L-aspartate oxidase; Provisional
Probab=95.44 E-value=0.015 Score=65.68 Aligned_cols=35 Identities=31% Similarity=0.664 Sum_probs=30.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
...||||||+|.|||+||..+++. .+|+||||.+.
T Consensus 7 ~~~DVlVVG~G~AGl~AA~~aa~~---~~VilveK~~~ 41 (536)
T PRK09077 7 HQCDVLIIGSGAAGLSLALRLAEH---RRVAVLSKGPL 41 (536)
T ss_pred ccCCEEEECchHHHHHHHHHHHHC---CCEEEEeccCC
Confidence 346999999999999999999874 69999999764
No 491
>TIGR02462 pyranose_ox pyranose oxidase. Pyranose oxidase (also called glucose 2-oxidase) converts D-glucose and molecular oxygen to 2-dehydro-D-glucose and hydrogen peroxide. Peroxide production is believed to be important to the wood rot fungi in which this enzyme is found for lignin degradation.
Probab=95.44 E-value=0.016 Score=64.64 Aligned_cols=36 Identities=22% Similarity=0.397 Sum_probs=33.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcc
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHY 68 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~ 68 (706)
+||+|||+|++|+.+|+.|++. +++|++||++....
T Consensus 1 ~dv~ivg~Gp~G~~~a~~l~~~--g~~v~~~e~~~~~~ 36 (544)
T TIGR02462 1 YDVFIAGSGPIGCTYARLCVDA--GLKVAMVEIGAADS 36 (544)
T ss_pred CcEEEECCchHHHHHHHHHHHC--CCeEEEEeccCccC
Confidence 5899999999999999999998 89999999998643
No 492
>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]
Probab=95.42 E-value=0.011 Score=63.79 Aligned_cols=36 Identities=25% Similarity=0.472 Sum_probs=32.1
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
.++||+|||||.+|+++|..|.++ +.+|+++|++..
T Consensus 3 ~~~~vvVIGgGi~Gls~A~~La~~--G~~V~vie~~~~ 38 (387)
T COG0665 3 MKMDVVIIGGGIVGLSAAYYLAER--GADVTVLEAGEA 38 (387)
T ss_pred CcceEEEECCcHHHHHHHHHHHHc--CCEEEEEecCcc
Confidence 467999999999999999999998 679999998653
No 493
>PRK12843 putative FAD-binding dehydrogenase; Reviewed
Probab=95.41 E-value=0.022 Score=64.89 Aligned_cols=60 Identities=8% Similarity=-0.003 Sum_probs=42.9
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeC-CCce--EEee-cEEEECCCCCch
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSE-DKTE--RLPY-AIMHVTPPMGPV 324 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~-~~g~--~i~~-D~vI~a~G~~~~ 324 (706)
...+...+.+.+++.||+++.++.+.++..+++.|+.+.. .+++ ++.+ +.||+|+|--..
T Consensus 220 G~~l~~aL~~~~~~~Gv~i~~~t~v~~Li~~~g~V~GV~~~~~g~~~~i~A~~~VVlAtGg~~~ 283 (578)
T PRK12843 220 GNALIGRLLYSLRARGVRILTQTDVESLETDHGRVIGATVVQGGVRRRIRARGGVVLATGGFNR 283 (578)
T ss_pred cHHHHHHHHHHHHhCCCEEEeCCEEEEEEeeCCEEEEEEEecCCeEEEEEccceEEECCCCccc
Confidence 4567788889999999999999999998754555543322 2333 4675 678899876544
No 494
>PLN02976 amine oxidase
Probab=95.41 E-value=0.017 Score=69.61 Aligned_cols=36 Identities=28% Similarity=0.451 Sum_probs=33.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..++|+|||||++|+++|..|++. |++|+|+|+++.
T Consensus 692 ~~~dV~IIGAG~AGLaAA~~L~~~--G~~V~VlEa~~~ 727 (1713)
T PLN02976 692 DRKKIIVVGAGPAGLTAARHLQRQ--GFSVTVLEARSR 727 (1713)
T ss_pred CCCcEEEECchHHHHHHHHHHHHC--CCcEEEEeeccC
Confidence 457899999999999999999998 899999999875
No 495
>PRK07233 hypothetical protein; Provisional
Probab=95.40 E-value=0.012 Score=64.80 Aligned_cols=33 Identities=33% Similarity=0.651 Sum_probs=30.3
Q ss_pred cccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 469 HLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 469 ~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
+|+|||||.|||+||..|.+. +.+|+|+|+++.
T Consensus 1 ~vvVIGaGiaGL~aA~~L~~~--G~~v~vlE~~~~ 33 (434)
T PRK07233 1 KIAIVGGGIAGLAAAYRLAKR--GHEVTVFEADDQ 33 (434)
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCcEEEEEeCCC
Confidence 589999999999999999997 789999999764
No 496
>PRK08071 L-aspartate oxidase; Provisional
Probab=95.39 E-value=0.015 Score=65.10 Aligned_cols=34 Identities=21% Similarity=0.416 Sum_probs=30.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..||||||+|.|||+||..+++ +.+|+|||+.+.
T Consensus 3 ~~DVlVVG~G~AGl~AAl~a~~---g~~V~lveK~~~ 36 (510)
T PRK08071 3 SADVIIIGSGIAALTVAKELCH---EYNVIIITKKTK 36 (510)
T ss_pred ccCEEEECccHHHHHHHHHhhc---CCCEEEEeccCC
Confidence 4699999999999999999964 589999999764
No 497
>PTZ00383 malate:quinone oxidoreductase; Provisional
Probab=95.39 E-value=0.013 Score=64.88 Aligned_cols=38 Identities=18% Similarity=0.481 Sum_probs=33.4
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
.++||||||||..|+++|..|+++.+..+|+|+|+.+.
T Consensus 44 ~~~DVvIIGGGI~G~a~A~~La~~~~~~~V~VlEk~~~ 81 (497)
T PTZ00383 44 DVYDVVIVGGGVTGTALFYTLSKFTNLKKIALIERRSD 81 (497)
T ss_pred CcccEEEECccHHHHHHHHHHHhhCCCCEEEEEecCcc
Confidence 46899999999999999999998755679999999753
No 498
>PRK13339 malate:quinone oxidoreductase; Reviewed
Probab=95.38 E-value=0.014 Score=64.42 Aligned_cols=41 Identities=15% Similarity=0.152 Sum_probs=35.2
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYY 506 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~ 506 (706)
..+||||||||.+|+++|..|++..|+.+|+|+|+.+...+
T Consensus 5 ~~~DvvIIGgGI~G~sla~~L~~~~~~~~V~vlEr~~~~a~ 45 (497)
T PRK13339 5 ESKDVVLVGAGILSTTFGVLLKELDPDWNIEVVERLDSPAI 45 (497)
T ss_pred ccCCEEEECchHHHHHHHHHHHhCCCCCeEEEEEcCCCcch
Confidence 35699999999999999999999888899999999444443
No 499
>PLN02568 polyamine oxidase
Probab=95.35 E-value=0.013 Score=65.72 Aligned_cols=39 Identities=23% Similarity=0.328 Sum_probs=32.2
Q ss_pred cccccccccCcchhHHHHHHHHHhhc---CCCcEEEECCCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRL---GKGQVSIVEPTDD 503 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~---~~~~i~vid~~~~ 503 (706)
++.++|+|||||.||++||+.|.+.. .+.+|+|+|+++.
T Consensus 3 ~~~~~v~iiGaG~aGl~aa~~L~~~g~~~~~~~v~v~E~~~~ 44 (539)
T PLN02568 3 AKKPRIVIIGAGMAGLTAANKLYTSSAANDMFELTVVEGGDR 44 (539)
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcccccCCceEEEEeCCCC
Confidence 34568999999999999999999762 1378999999764
No 500
>PRK05945 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=95.34 E-value=0.012 Score=66.92 Aligned_cols=38 Identities=29% Similarity=0.392 Sum_probs=32.5
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
..+||||||+|.||++||.++++..++.+|+|+|+...
T Consensus 2 ~~~DVlVIG~G~AGl~AAi~aa~~g~g~~V~vleK~~~ 39 (575)
T PRK05945 2 LEHDVVIVGGGLAGCRAALEIKRLDPSLDVAVVAKTHP 39 (575)
T ss_pred CcccEEEECccHHHHHHHHHHHHhcCCCcEEEEeccCC
Confidence 34699999999999999999998744579999999654
Done!