Query psy8791
Match_columns 706
No_of_seqs 506 out of 4741
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 19:24:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8791.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8791hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hyw_A Sulfide-quinone reducta 100.0 6.9E-49 2.4E-53 428.6 35.9 371 30-452 2-393 (430)
2 3vrd_B FCCB subunit, flavocyto 100.0 2E-48 6.8E-53 422.3 29.8 387 30-458 2-400 (401)
3 4g6h_A Rotenone-insensitive NA 100.0 4.3E-43 1.5E-47 388.1 25.8 344 28-415 40-448 (502)
4 3sx6_A Sulfide-quinone reducta 100.0 7.6E-42 2.6E-46 374.1 34.1 390 30-470 4-421 (437)
5 3h8l_A NADH oxidase; membrane 100.0 3.5E-41 1.2E-45 366.1 28.0 365 31-452 2-397 (409)
6 3h28_A Sulfide-quinone reducta 100.0 4.5E-40 1.6E-44 359.4 35.9 364 30-446 2-387 (430)
7 4eqs_A Coenzyme A disulfide re 100.0 1.6E-32 5.5E-37 299.3 29.0 287 31-384 1-309 (437)
8 3klj_A NAD(FAD)-dependent dehy 100.0 1.6E-32 5.6E-37 293.8 26.1 277 28-384 7-292 (385)
9 3lxd_A FAD-dependent pyridine 100.0 2.1E-31 7.3E-36 289.4 34.0 295 29-384 8-319 (415)
10 3fg2_P Putative rubredoxin red 100.0 1.7E-31 5.9E-36 289.0 31.6 293 30-384 1-308 (404)
11 1xhc_A NADH oxidase /nitrite r 100.0 1.5E-31 5.1E-36 285.0 28.2 281 30-384 8-295 (367)
12 3ef6_A Toluene 1,2-dioxygenase 100.0 2.1E-31 7E-36 288.8 28.1 292 30-384 2-307 (410)
13 3iwa_A FAD-dependent pyridine 100.0 1.3E-30 4.3E-35 288.2 28.3 295 30-384 3-327 (472)
14 3kd9_A Coenzyme A disulfide re 100.0 3.5E-30 1.2E-34 282.7 31.3 293 30-384 3-313 (449)
15 3ntd_A FAD-dependent pyridine 100.0 8.5E-30 2.9E-34 288.4 33.4 295 30-384 1-336 (565)
16 2gqw_A Ferredoxin reductase; f 100.0 4.6E-30 1.6E-34 277.9 29.3 285 29-384 6-306 (408)
17 3ics_A Coenzyme A-disulfide re 100.0 9.1E-30 3.1E-34 289.0 31.9 298 26-384 32-351 (588)
18 1q1r_A Putidaredoxin reductase 100.0 1.7E-29 5.6E-34 275.3 30.0 296 30-384 4-317 (431)
19 2cdu_A NADPH oxidase; flavoenz 100.0 1.7E-29 6E-34 277.4 30.1 291 31-384 1-315 (452)
20 3oc4_A Oxidoreductase, pyridin 100.0 9.9E-30 3.4E-34 279.3 26.6 291 31-384 3-312 (452)
21 3cgb_A Pyridine nucleotide-dis 100.0 1.1E-28 3.9E-33 272.7 33.4 294 30-384 36-351 (480)
22 2bc0_A NADH oxidase; flavoprot 100.0 4.4E-29 1.5E-33 276.7 28.5 304 30-384 35-359 (490)
23 2v3a_A Rubredoxin reductase; a 100.0 1.1E-28 3.7E-33 265.3 30.5 306 30-403 4-319 (384)
24 1nhp_A NADH peroxidase; oxidor 100.0 9.2E-29 3.2E-33 271.3 30.0 292 31-384 1-314 (447)
25 1m6i_A Programmed cell death p 100.0 8.6E-29 2.9E-33 274.1 29.4 321 29-412 10-372 (493)
26 3f8d_A Thioredoxin reductase ( 100.0 1.2E-28 3.9E-33 258.5 25.0 294 30-392 15-321 (323)
27 2zbw_A Thioredoxin reductase; 100.0 1E-28 3.5E-33 260.6 23.3 301 30-398 5-328 (335)
28 3itj_A Thioredoxin reductase 1 100.0 6.3E-29 2.1E-33 262.4 20.8 297 26-390 18-337 (338)
29 3r9u_A Thioredoxin reductase; 100.0 2.1E-28 7E-33 255.7 23.5 291 28-390 2-314 (315)
30 3fbs_A Oxidoreductase; structu 100.0 1.6E-28 5.4E-33 254.3 22.0 283 30-391 2-295 (297)
31 4fk1_A Putative thioredoxin re 100.0 9.1E-29 3.1E-33 257.2 20.2 290 28-390 4-302 (304)
32 2q7v_A Thioredoxin reductase; 100.0 8.1E-28 2.8E-32 252.6 25.1 290 30-392 8-316 (325)
33 3cty_A Thioredoxin reductase; 100.0 7.5E-28 2.6E-32 252.2 24.6 290 29-390 15-318 (319)
34 1trb_A Thioredoxin reductase; 100.0 2.6E-28 9E-33 255.6 21.1 295 30-391 5-317 (320)
35 1mo9_A ORF3; nucleotide bindin 100.0 1.5E-27 5E-32 266.4 27.8 284 28-384 41-376 (523)
36 2q0l_A TRXR, thioredoxin reduc 100.0 1.3E-27 4.3E-32 249.4 24.8 288 31-389 2-310 (311)
37 2qae_A Lipoamide, dihydrolipoy 100.0 6.8E-28 2.3E-32 266.0 23.4 295 30-398 2-348 (468)
38 1zmd_A Dihydrolipoyl dehydroge 100.0 7.7E-28 2.6E-32 266.0 23.9 297 30-401 6-356 (474)
39 3l8k_A Dihydrolipoyl dehydroge 100.0 2E-28 6.7E-33 269.9 18.1 282 30-384 4-331 (466)
40 1zk7_A HGII, reductase, mercur 100.0 5.4E-27 1.8E-31 258.7 29.6 282 29-384 3-332 (467)
41 3lzw_A Ferredoxin--NADP reduct 100.0 8.7E-28 3E-32 252.9 22.0 291 30-392 7-319 (332)
42 2wpf_A Trypanothione reductase 100.0 1.6E-27 5.5E-32 264.0 25.0 279 30-384 7-353 (495)
43 1ges_A Glutathione reductase; 100.0 3.1E-27 1.1E-31 259.0 26.4 277 30-384 4-326 (450)
44 3ab1_A Ferredoxin--NADP reduct 100.0 2E-27 6.7E-32 253.4 23.7 296 29-392 13-332 (360)
45 1ebd_A E3BD, dihydrolipoamide 100.0 3.8E-27 1.3E-31 259.0 26.6 293 30-399 3-342 (455)
46 2hqm_A GR, grase, glutathione 100.0 9.4E-28 3.2E-32 265.3 21.7 281 29-384 10-345 (479)
47 1dxl_A Dihydrolipoamide dehydr 100.0 2.7E-27 9.3E-32 261.5 25.3 297 28-400 4-352 (470)
48 1fec_A Trypanothione reductase 100.0 4.5E-27 1.5E-31 260.3 26.8 282 30-384 3-349 (490)
49 1xdi_A RV3303C-LPDA; reductase 100.0 3.3E-27 1.1E-31 262.5 24.8 284 30-384 2-340 (499)
50 3urh_A Dihydrolipoyl dehydroge 100.0 2.3E-27 7.9E-32 263.3 22.8 307 29-409 24-381 (491)
51 4gcm_A TRXR, thioredoxin reduc 100.0 9.5E-27 3.2E-31 242.9 25.9 289 29-388 5-306 (312)
52 1onf_A GR, grase, glutathione 100.0 2.2E-27 7.6E-32 263.6 22.3 295 30-402 2-384 (500)
53 2a8x_A Dihydrolipoyl dehydroge 100.0 2.6E-27 8.8E-32 261.1 22.2 282 30-384 3-332 (464)
54 4a5l_A Thioredoxin reductase; 100.0 5.5E-27 1.9E-31 244.9 23.0 293 28-389 2-313 (314)
55 1fl2_A Alkyl hydroperoxide red 100.0 1E-26 3.5E-31 242.4 24.9 289 31-391 2-308 (310)
56 1vdc_A NTR, NADPH dependent th 100.0 5.8E-27 2E-31 246.9 23.0 299 30-392 8-327 (333)
57 2r9z_A Glutathione amide reduc 99.9 3.2E-26 1.1E-30 251.8 29.6 278 29-384 3-325 (463)
58 1ojt_A Surface protein; redox- 99.9 6.1E-27 2.1E-31 259.1 23.5 291 30-398 6-357 (482)
59 3qfa_A Thioredoxin reductase 1 99.9 4.8E-26 1.7E-30 253.7 30.7 301 28-403 30-394 (519)
60 4dna_A Probable glutathione re 99.9 9E-27 3.1E-31 256.5 24.2 278 30-384 5-329 (463)
61 2a87_A TRXR, TR, thioredoxin r 99.9 5.6E-27 1.9E-31 247.2 21.4 295 28-391 12-319 (335)
62 3dk9_A Grase, GR, glutathione 99.9 1.6E-26 5.6E-31 255.6 25.6 282 29-384 19-354 (478)
63 2eq6_A Pyruvate dehydrogenase 99.9 1.4E-26 4.7E-31 254.9 24.7 279 30-384 6-332 (464)
64 3o0h_A Glutathione reductase; 99.9 1.7E-26 5.8E-31 255.7 23.9 278 30-384 26-349 (484)
65 3lad_A Dihydrolipoamide dehydr 99.9 1.3E-26 4.5E-31 256.3 21.5 299 29-403 2-356 (476)
66 3dgh_A TRXR-1, thioredoxin red 99.9 1E-25 3.6E-30 249.4 28.2 299 28-403 7-366 (483)
67 3dgz_A Thioredoxin reductase 2 99.9 1E-25 3.4E-30 249.8 27.9 284 29-384 5-350 (488)
68 1v59_A Dihydrolipoamide dehydr 99.9 2.4E-26 8.1E-31 254.4 22.3 285 30-385 5-349 (478)
69 2yqu_A 2-oxoglutarate dehydrog 99.9 1.7E-26 6E-31 253.8 18.7 280 31-385 2-326 (455)
70 1lvl_A Dihydrolipoamide dehydr 99.9 9.1E-26 3.1E-30 247.9 24.1 274 29-384 4-328 (458)
71 4a9w_A Monooxygenase; baeyer-v 99.9 5.8E-26 2E-30 241.4 19.2 287 30-389 3-353 (357)
72 3ic9_A Dihydrolipoamide dehydr 99.9 2.7E-25 9.3E-30 246.1 22.2 281 30-385 8-337 (492)
73 1hyu_A AHPF, alkyl hydroperoxi 99.9 9E-25 3.1E-29 243.4 26.3 291 28-390 210-518 (521)
74 2x8g_A Thioredoxin glutathione 99.9 5.1E-24 1.8E-28 242.1 30.4 286 28-385 105-458 (598)
75 3d1c_A Flavin-containing putat 99.9 2.3E-24 7.9E-29 230.4 23.9 288 30-390 4-341 (369)
76 2vdc_G Glutamate synthase [NAD 99.9 2.2E-25 7.6E-30 243.1 13.7 290 28-392 120-448 (456)
77 4b1b_A TRXR, thioredoxin reduc 99.9 2.3E-23 8E-28 230.7 26.7 299 30-403 42-398 (542)
78 3k30_A Histamine dehydrogenase 99.9 4.7E-24 1.6E-28 245.7 9.7 278 26-392 387-679 (690)
79 1y56_A Hypothetical protein PH 99.9 6.3E-23 2.2E-27 227.0 15.4 254 31-387 109-376 (493)
80 1cjc_A Protein (adrenodoxin re 99.9 5.8E-23 2E-27 224.7 14.7 301 29-392 5-399 (460)
81 1gte_A Dihydropyrimidine dehyd 99.9 1.3E-22 4.3E-27 242.6 18.0 289 29-388 186-508 (1025)
82 1lqt_A FPRA; NADP+ derivative, 99.9 3.1E-23 1.1E-27 226.6 11.5 299 30-390 3-389 (456)
83 2gag_A Heterotetrameric sarcos 99.9 3.9E-22 1.3E-26 236.8 19.0 282 30-389 128-445 (965)
84 1o94_A Tmadh, trimethylamine d 99.9 4.2E-23 1.4E-27 238.7 9.7 310 4-394 361-706 (729)
85 2xve_A Flavin-containing monoo 99.9 2.8E-21 9.6E-26 212.1 21.2 269 31-384 3-337 (464)
86 3s5w_A L-ornithine 5-monooxyge 99.9 6.8E-21 2.3E-25 209.9 18.4 111 279-392 329-453 (463)
87 1ps9_A 2,4-dienoyl-COA reducta 99.8 1.2E-20 4.2E-25 216.7 16.9 261 27-383 370-671 (671)
88 3gwf_A Cyclohexanone monooxyge 99.8 2E-20 6.9E-25 208.4 16.9 104 278-389 342-458 (540)
89 2gv8_A Monooxygenase; FMO, FAD 99.8 8.2E-20 2.8E-24 200.0 20.1 274 29-384 5-358 (447)
90 2ywl_A Thioredoxin reductase r 99.8 3.3E-18 1.1E-22 162.8 19.5 119 266-392 56-175 (180)
91 4ap3_A Steroid monooxygenase; 99.8 2.2E-18 7.6E-23 192.3 20.3 105 278-389 355-472 (549)
92 3uox_A Otemo; baeyer-villiger 99.8 6.9E-19 2.3E-23 196.2 14.4 108 276-389 348-467 (545)
93 4g6h_A Rotenone-insensitive NA 99.8 1E-19 3.5E-24 201.0 7.7 170 467-697 42-250 (502)
94 1w4x_A Phenylacetone monooxyge 99.8 6.5E-18 2.2E-22 189.2 21.2 107 278-390 350-468 (542)
95 3hyw_A Sulfide-quinone reducta 99.8 2.9E-19 9.9E-24 194.4 5.2 114 469-645 4-118 (430)
96 3klj_A NAD(FAD)-dependent dehy 99.7 1.6E-17 5.4E-22 177.5 10.0 156 465-688 7-170 (385)
97 3vrd_B FCCB subunit, flavocyto 99.7 5.9E-17 2E-21 174.9 11.5 118 468-647 3-120 (401)
98 3ef6_A Toluene 1,2-dioxygenase 99.7 2.3E-16 7.9E-21 170.4 11.6 159 468-688 3-167 (410)
99 3sx6_A Sulfide-quinone reducta 99.6 9.4E-17 3.2E-21 175.1 7.6 162 466-689 3-180 (437)
100 3lxd_A FAD-dependent pyridine 99.6 5.5E-16 1.9E-20 167.9 11.7 160 466-687 8-175 (415)
101 3fg2_P Putative rubredoxin red 99.6 1.2E-15 4E-20 164.7 12.4 159 468-688 2-166 (404)
102 1xhc_A NADH oxidase /nitrite r 99.6 1.1E-15 3.8E-20 162.3 8.5 150 469-688 10-167 (367)
103 3kd9_A Coenzyme A disulfide re 99.6 1.3E-15 4.4E-20 166.7 9.1 160 465-688 1-172 (449)
104 3oc4_A Oxidoreductase, pyridin 99.6 2.5E-15 8.6E-20 164.5 10.5 158 468-688 3-171 (452)
105 4gcm_A TRXR, thioredoxin reduc 99.6 3.3E-15 1.1E-19 155.3 10.2 155 468-689 7-170 (312)
106 2gqw_A Ferredoxin reductase; f 99.6 5.3E-15 1.8E-19 159.6 11.0 156 467-688 7-169 (408)
107 1q1r_A Putidaredoxin reductase 99.6 4.6E-15 1.6E-19 161.2 10.3 159 467-688 4-173 (431)
108 4a5l_A Thioredoxin reductase; 99.6 3.8E-15 1.3E-19 154.9 9.3 168 465-689 2-177 (314)
109 4fk1_A Putative thioredoxin re 99.5 2.8E-14 9.7E-19 147.6 13.2 146 463-675 2-152 (304)
110 1m6i_A Programmed cell death p 99.5 1.3E-14 4.3E-19 160.5 10.1 189 464-688 8-204 (493)
111 4b1b_A TRXR, thioredoxin reduc 99.5 1.8E-15 6.1E-20 167.6 3.1 196 468-690 43-249 (542)
112 3iwa_A FAD-dependent pyridine 99.5 1.5E-14 5.2E-19 159.3 10.1 165 466-686 2-181 (472)
113 4eqs_A Coenzyme A disulfide re 99.5 9.7E-15 3.3E-19 158.8 8.4 156 469-689 2-172 (437)
114 3h8l_A NADH oxidase; membrane 99.5 1.7E-14 6E-19 155.8 9.4 117 467-645 1-123 (409)
115 3fbs_A Oxidoreductase; structu 99.5 5.2E-14 1.8E-18 144.9 10.9 153 467-686 2-163 (297)
116 4ap3_A Steroid monooxygenase; 99.5 2.7E-14 9.2E-19 159.3 9.3 192 466-700 20-229 (549)
117 2cdu_A NADPH oxidase; flavoenz 99.5 2.3E-14 7.9E-19 156.9 8.3 160 468-688 1-173 (452)
118 2bc0_A NADH oxidase; flavoprot 99.5 2.3E-14 7.8E-19 158.5 8.2 160 468-688 36-218 (490)
119 1zk7_A HGII, reductase, mercur 99.5 8.3E-15 2.8E-19 161.2 4.6 187 466-688 3-200 (467)
120 3ntd_A FAD-dependent pyridine 99.5 2.3E-14 8E-19 161.6 8.4 159 467-688 1-175 (565)
121 1nhp_A NADH peroxidase; oxidor 99.5 3.6E-14 1.2E-18 155.2 9.6 159 468-688 1-173 (447)
122 3l8k_A Dihydrolipoyl dehydroge 99.5 6.8E-15 2.3E-19 161.7 3.8 184 466-688 3-196 (466)
123 2v3a_A Rubredoxin reductase; a 99.5 2.8E-14 9.5E-19 152.8 8.3 159 466-688 3-169 (384)
124 3h28_A Sulfide-quinone reducta 99.5 3.4E-14 1.1E-18 154.6 8.5 110 467-638 2-112 (430)
125 3ics_A Coenzyme A-disulfide re 99.5 5E-14 1.7E-18 159.5 10.1 162 465-688 34-211 (588)
126 3cgb_A Pyridine nucleotide-dis 99.5 5.3E-14 1.8E-18 155.1 9.9 159 467-688 36-210 (480)
127 3uox_A Otemo; baeyer-villiger 99.5 1.5E-14 5.3E-19 161.1 4.7 192 466-700 8-223 (545)
128 3gwf_A Cyclohexanone monooxyge 99.5 2.9E-14 1E-18 158.6 6.2 101 595-700 100-216 (540)
129 2cul_A Glucose-inhibited divis 99.5 3E-13 1E-17 133.9 12.5 118 266-387 68-231 (232)
130 2q0l_A TRXR, thioredoxin reduc 99.4 2E-13 6.7E-18 141.7 11.0 157 467-687 1-166 (311)
131 3qfa_A Thioredoxin reductase 1 99.4 2.1E-14 7.1E-19 159.7 3.7 197 464-689 29-235 (519)
132 2q7v_A Thioredoxin reductase; 99.4 3.5E-13 1.2E-17 140.8 11.5 159 465-687 6-175 (325)
133 3dk9_A Grase, GR, glutathione 99.4 2.9E-14 1E-18 157.3 3.1 186 463-688 16-211 (478)
134 3itj_A Thioredoxin reductase 1 99.4 1.7E-13 5.7E-18 143.8 8.7 165 464-687 19-196 (338)
135 1ges_A Glutathione reductase; 99.4 2.8E-14 9.5E-19 156.0 2.6 182 466-688 3-191 (450)
136 1zmd_A Dihydrolipoyl dehydroge 99.4 6.7E-14 2.3E-18 154.2 4.9 189 466-688 5-202 (474)
137 3dgz_A Thioredoxin reductase 2 99.4 2.8E-14 9.7E-19 157.7 1.6 195 466-689 5-210 (488)
138 3dgh_A TRXR-1, thioredoxin red 99.4 5.4E-14 1.8E-18 155.3 3.4 195 465-688 7-211 (483)
139 3f8d_A Thioredoxin reductase ( 99.4 7.9E-13 2.7E-17 137.7 12.0 156 467-688 15-178 (323)
140 4a9w_A Monooxygenase; baeyer-v 99.4 7E-13 2.4E-17 140.1 11.5 172 465-687 1-186 (357)
141 2hqm_A GR, grase, glutathione 99.4 5.9E-14 2E-18 154.7 3.1 190 466-688 10-209 (479)
142 1fl2_A Alkyl hydroperoxide red 99.4 5.8E-13 2E-17 138.1 10.2 154 468-687 2-167 (310)
143 3urh_A Dihydrolipoyl dehydroge 99.4 4.7E-14 1.6E-18 156.2 1.6 190 466-688 24-222 (491)
144 2r9z_A Glutathione amide reduc 99.4 9.4E-14 3.2E-18 152.3 4.0 180 466-688 3-190 (463)
145 2qae_A Lipoamide, dihydrolipoy 99.4 4.1E-14 1.4E-18 155.6 0.2 188 467-688 2-198 (468)
146 1xdi_A RV3303C-LPDA; reductase 99.4 1.1E-13 3.9E-18 153.3 3.6 189 467-688 2-206 (499)
147 2wpf_A Trypanothione reductase 99.4 2.3E-13 7.9E-18 150.4 5.0 191 466-686 6-213 (495)
148 3r9u_A Thioredoxin reductase; 99.4 1.5E-12 5.1E-17 135.1 10.8 158 465-687 2-170 (315)
149 1trb_A Thioredoxin reductase; 99.4 6.3E-13 2.1E-17 138.4 7.8 159 465-687 3-168 (320)
150 1ebd_A E3BD, dihydrolipoamide 99.4 1.3E-13 4.4E-18 151.1 2.3 184 467-688 3-194 (455)
151 1dxl_A Dihydrolipoamide dehydr 99.4 9.7E-14 3.3E-18 152.8 1.3 188 466-688 5-201 (470)
152 2a87_A TRXR, TR, thioredoxin r 99.4 1.6E-12 5.4E-17 136.4 10.3 159 465-687 12-178 (335)
153 2eq6_A Pyruvate dehydrogenase 99.3 3.2E-13 1.1E-17 148.2 4.7 179 466-687 5-192 (464)
154 1lvl_A Dihydrolipoamide dehydr 99.3 3.5E-13 1.2E-17 147.7 4.7 184 466-688 4-195 (458)
155 4b63_A L-ornithine N5 monooxyg 99.3 1.6E-10 5.3E-15 127.7 25.8 75 305-380 391-480 (501)
156 3cty_A Thioredoxin reductase; 99.3 2E-12 6.9E-17 134.6 10.1 156 466-687 15-178 (319)
157 3lzw_A Ferredoxin--NADP reduct 99.3 1.5E-12 5.2E-17 136.1 9.2 158 466-686 6-176 (332)
158 1fec_A Trypanothione reductase 99.3 5.9E-13 2E-17 147.0 5.5 191 466-686 2-209 (490)
159 1hyu_A AHPF, alkyl hydroperoxi 99.3 6.7E-12 2.3E-16 139.5 13.5 157 466-688 211-379 (521)
160 2a8x_A Dihydrolipoyl dehydroge 99.3 4.1E-13 1.4E-17 147.5 3.6 185 466-688 2-195 (464)
161 1w4x_A Phenylacetone monooxyge 99.3 1.8E-12 6.1E-17 145.0 8.7 97 597-698 111-222 (542)
162 2xve_A Flavin-containing monoo 99.3 3E-12 1E-16 140.2 10.4 90 595-689 114-222 (464)
163 2yqu_A 2-oxoglutarate dehydrog 99.3 1.4E-13 4.6E-18 150.9 -0.4 183 468-688 2-191 (455)
164 3lad_A Dihydrolipoamide dehydr 99.3 1.6E-13 5.3E-18 151.4 -0.4 194 466-688 2-204 (476)
165 2zbw_A Thioredoxin reductase; 99.3 3.4E-12 1.2E-16 133.8 8.9 160 466-687 4-175 (335)
166 1ojt_A Surface protein; redox- 99.3 6.7E-13 2.3E-17 146.4 3.5 185 466-688 5-209 (482)
167 1onf_A GR, grase, glutathione 99.3 2E-13 7E-18 151.2 -0.7 178 467-688 2-200 (500)
168 1vdc_A NTR, NADPH dependent th 99.3 3E-12 1E-16 134.1 8.2 167 465-687 6-182 (333)
169 1mo9_A ORF3; nucleotide bindin 99.3 1.2E-12 4.2E-17 145.6 5.4 177 464-687 40-237 (523)
170 3o0h_A Glutathione reductase; 99.3 1.4E-12 4.7E-17 144.0 4.8 180 467-688 26-215 (484)
171 3ab1_A Ferredoxin--NADP reduct 99.3 6.2E-12 2.1E-16 133.2 9.1 162 464-687 11-186 (360)
172 3ic9_A Dihydrolipoamide dehydr 99.3 5.8E-13 2E-17 147.1 1.1 183 467-688 8-198 (492)
173 4dna_A Probable glutathione re 99.3 6.1E-13 2.1E-17 146.0 0.9 181 467-688 5-194 (463)
174 2x8g_A Thioredoxin glutathione 99.3 1.5E-12 5.2E-17 147.6 3.5 86 595-689 219-311 (598)
175 1v59_A Dihydrolipoamide dehydr 99.2 2.1E-12 7.2E-17 142.4 4.5 189 465-687 3-206 (478)
176 2gv8_A Monooxygenase; FMO, FAD 99.2 8.7E-12 3E-16 136.2 9.0 92 596-689 129-237 (447)
177 3s5w_A L-ornithine 5-monooxyge 99.2 3.1E-11 1.1E-15 132.5 8.1 43 466-508 29-74 (463)
178 3d1c_A Flavin-containing putat 99.2 6.1E-11 2.1E-15 125.9 10.0 82 595-688 101-190 (369)
179 1lqt_A FPRA; NADP+ derivative, 99.1 1.9E-11 6.5E-16 133.3 2.7 150 466-686 2-169 (456)
180 2e5v_A L-aspartate oxidase; ar 99.1 7.1E-11 2.4E-15 129.5 6.8 31 32-64 1-31 (472)
181 1cjc_A Protein (adrenodoxin re 99.1 5.6E-11 1.9E-15 129.6 4.8 149 466-685 5-166 (460)
182 2vdc_G Glutamate synthase [NAD 99.0 1.2E-10 4.1E-15 126.7 4.2 38 465-504 120-157 (456)
183 1ps9_A 2,4-dienoyl-COA reducta 99.0 1.2E-10 4.1E-15 133.6 2.3 140 466-688 372-518 (671)
184 2gag_A Heterotetrameric sarcos 99.0 3.7E-10 1.3E-14 134.1 6.0 156 466-688 127-308 (965)
185 3fpz_A Thiazole biosynthetic e 98.9 2.8E-11 9.4E-16 126.3 -4.0 72 309-388 249-325 (326)
186 1y56_A Hypothetical protein PH 98.9 7.3E-10 2.5E-14 122.2 5.8 116 466-644 107-228 (493)
187 1o94_A Tmadh, trimethylamine d 98.9 2.2E-10 7.7E-15 132.2 0.8 37 466-504 388-424 (729)
188 3k30_A Histamine dehydrogenase 98.8 1.2E-09 4.1E-14 125.6 3.2 37 466-504 390-426 (690)
189 4dgk_A Phytoene dehydrogenase; 98.8 2.9E-08 9.9E-13 109.9 13.3 59 265-323 220-278 (501)
190 1gte_A Dihydropyrimidine dehyd 98.8 1.7E-09 5.8E-14 129.4 2.4 151 466-687 186-355 (1025)
191 2ywl_A Thioredoxin reductase r 98.8 7.9E-09 2.7E-13 97.5 6.6 115 467-643 1-118 (180)
192 3k7m_X 6-hydroxy-L-nicotine ox 98.7 1.3E-08 4.6E-13 110.3 8.8 91 266-360 204-305 (431)
193 3oz2_A Digeranylgeranylglycero 98.7 9.6E-08 3.3E-12 101.9 14.7 58 266-323 102-162 (397)
194 2gqf_A Hypothetical protein HI 98.7 4.5E-09 1.5E-13 112.5 2.5 38 465-504 2-39 (401)
195 3v76_A Flavoprotein; structura 98.6 3E-07 1E-11 98.6 15.0 58 265-324 131-188 (417)
196 3dme_A Conserved exported prot 98.6 3.8E-07 1.3E-11 96.3 15.2 76 256-332 140-219 (369)
197 4b63_A L-ornithine N5 monooxyg 98.6 9.4E-08 3.2E-12 105.4 10.5 44 465-508 37-92 (501)
198 3dje_A Fructosyl amine: oxygen 98.6 4.9E-07 1.7E-11 98.1 15.6 74 254-327 148-225 (438)
199 3v76_A Flavoprotein; structura 98.6 1.2E-08 4.2E-13 109.5 2.7 158 466-635 26-187 (417)
200 2cul_A Glucose-inhibited divis 98.6 5.9E-08 2E-12 95.6 7.2 127 466-643 2-133 (232)
201 1y56_B Sarcosine oxidase; dehy 98.6 8.3E-07 2.9E-11 94.3 16.4 75 254-329 137-211 (382)
202 2gag_B Heterotetrameric sarcos 98.5 1.3E-06 4.4E-11 93.6 17.2 78 253-331 161-238 (405)
203 2gf3_A MSOX, monomeric sarcosi 98.5 1.4E-06 4.7E-11 92.8 16.6 79 251-331 135-213 (389)
204 3nrn_A Uncharacterized protein 98.5 1.4E-06 4.9E-11 93.9 16.2 57 265-324 188-244 (421)
205 3nlc_A Uncharacterized protein 98.5 5.1E-07 1.8E-11 99.7 12.6 61 266-326 220-280 (549)
206 3ces_A MNMG, tRNA uridine 5-ca 98.5 1.4E-07 4.9E-12 105.0 7.8 50 595-644 138-190 (651)
207 2i0z_A NAD(FAD)-utilizing dehy 98.5 4.6E-07 1.6E-11 98.5 11.7 59 266-324 134-192 (447)
208 3alj_A 2-methyl-3-hydroxypyrid 98.5 1.9E-07 6.4E-12 99.3 8.3 105 30-137 11-161 (379)
209 3i3l_A Alkylhalidase CMLS; fla 98.5 3.2E-07 1.1E-11 102.8 10.2 59 266-324 128-189 (591)
210 3nyc_A D-arginine dehydrogenas 98.5 7.1E-07 2.4E-11 94.7 12.2 75 255-331 143-217 (381)
211 3ces_A MNMG, tRNA uridine 5-ca 98.4 1.8E-07 6.1E-12 104.2 7.3 113 29-143 27-188 (651)
212 1ryi_A Glycine oxidase; flavop 98.4 2.4E-06 8E-11 90.8 15.6 74 256-331 154-227 (382)
213 2zxi_A TRNA uridine 5-carboxym 98.4 1.9E-07 6.5E-12 103.6 7.1 113 29-143 26-187 (637)
214 3ps9_A TRNA 5-methylaminomethy 98.4 1.4E-06 4.9E-11 99.8 14.4 73 257-330 408-480 (676)
215 3e1t_A Halogenase; flavoprotei 98.4 4.9E-07 1.7E-11 100.1 9.9 59 266-324 111-173 (512)
216 3ka7_A Oxidoreductase; structu 98.4 3.5E-06 1.2E-10 90.9 16.4 59 265-324 195-253 (425)
217 3pvc_A TRNA 5-methylaminomethy 98.4 1.9E-06 6.6E-11 98.9 14.9 67 263-330 409-476 (689)
218 3axb_A Putative oxidoreductase 98.4 1.7E-07 5.8E-12 102.1 5.6 78 253-331 168-262 (448)
219 2zxi_A TRNA uridine 5-carboxym 98.4 2.9E-07 1E-11 102.0 7.1 50 595-644 137-189 (637)
220 3cgv_A Geranylgeranyl reductas 98.4 2.3E-06 7.9E-11 91.3 13.9 59 266-324 102-163 (397)
221 3alj_A 2-methyl-3-hydroxypyrid 98.4 3.5E-07 1.2E-11 97.2 7.3 37 466-504 10-46 (379)
222 2uzz_A N-methyl-L-tryptophan o 98.4 3.9E-06 1.3E-10 88.7 15.1 73 254-328 137-209 (372)
223 2gqf_A Hypothetical protein HI 98.3 8.2E-07 2.8E-11 94.9 8.3 35 30-66 4-38 (401)
224 3rp8_A Flavoprotein monooxygen 98.3 7.3E-07 2.5E-11 95.7 7.8 46 19-66 12-57 (407)
225 3cp8_A TRNA uridine 5-carboxym 98.3 4.6E-07 1.6E-11 100.8 6.1 109 29-139 20-177 (641)
226 1s3e_A Amine oxidase [flavin-c 98.3 1.2E-06 4E-11 97.4 9.4 38 29-68 3-40 (520)
227 2bry_A NEDD9 interacting prote 98.3 5.4E-07 1.8E-11 99.2 6.5 114 28-143 90-237 (497)
228 2oln_A NIKD protein; flavoprot 98.3 5.2E-06 1.8E-10 88.6 14.1 75 255-331 142-216 (397)
229 1rp0_A ARA6, thiazole biosynth 98.3 1.2E-06 4E-11 89.1 8.5 108 30-138 39-193 (284)
230 1pj5_A N,N-dimethylglycine oxi 98.3 9.7E-06 3.3E-10 95.2 17.4 77 254-331 139-215 (830)
231 2x3n_A Probable FAD-dependent 98.3 1E-06 3.5E-11 94.3 7.8 106 30-137 6-167 (399)
232 2vou_A 2,6-dihydroxypyridine h 98.3 2.3E-06 7.9E-11 91.5 10.6 107 29-137 4-154 (397)
233 2xdo_A TETX2 protein; tetracyc 98.2 2.7E-06 9.2E-11 91.0 10.0 36 29-66 25-60 (398)
234 2e4g_A Tryptophan halogenase; 98.2 2.2E-06 7.6E-11 95.7 9.7 58 266-324 194-253 (550)
235 3qj4_A Renalase; FAD/NAD(P)-bi 98.2 2.9E-06 9.8E-11 88.7 9.9 34 31-66 2-38 (342)
236 3cp8_A TRNA uridine 5-carboxym 98.2 9.5E-07 3.3E-11 98.3 6.1 49 595-643 131-182 (641)
237 3nix_A Flavoprotein/dehydrogen 98.2 1.2E-06 4.2E-11 94.3 6.5 35 30-66 5-39 (421)
238 2i0z_A NAD(FAD)-utilizing dehy 98.2 4.6E-07 1.6E-11 98.5 3.1 36 467-504 26-61 (447)
239 3da1_A Glycerol-3-phosphate de 98.2 1.3E-05 4.3E-10 89.6 14.5 70 262-331 166-240 (561)
240 1yvv_A Amine oxidase, flavin-c 98.1 6.1E-06 2.1E-10 85.8 10.3 35 30-66 2-36 (336)
241 2x3n_A Probable FAD-dependent 98.1 3.1E-06 1.1E-10 90.5 7.6 36 467-504 6-41 (399)
242 3rp8_A Flavoprotein monooxygen 98.1 1.8E-06 6.2E-11 92.6 5.4 40 463-504 19-58 (407)
243 3dme_A Conserved exported prot 98.1 3.7E-06 1.3E-10 88.6 7.6 36 466-503 3-38 (369)
244 3nix_A Flavoprotein/dehydrogen 98.1 2.6E-06 8.9E-11 91.8 6.3 36 467-504 5-40 (421)
245 4hb9_A Similarities with proba 98.1 4.8E-06 1.6E-10 89.2 8.0 35 31-67 2-36 (412)
246 3fmw_A Oxygenase; mithramycin, 98.1 2.7E-06 9.2E-11 95.1 6.2 36 29-66 48-83 (570)
247 2bry_A NEDD9 interacting prote 98.1 2E-06 6.7E-11 94.7 4.9 37 466-504 91-127 (497)
248 3qj4_A Renalase; FAD/NAD(P)-bi 98.1 2.7E-06 9.1E-11 89.0 5.6 37 467-503 1-38 (342)
249 2qa2_A CABE, polyketide oxygen 98.0 1.2E-05 4.2E-10 88.4 10.8 58 266-324 107-167 (499)
250 3nlc_A Uncharacterized protein 98.0 3.3E-06 1.1E-10 93.2 6.2 35 467-503 107-141 (549)
251 2qa1_A PGAE, polyketide oxygen 98.0 1.3E-05 4.4E-10 88.2 10.8 58 266-324 106-166 (500)
252 3kkj_A Amine oxidase, flavin-c 98.0 3E-06 1E-10 85.0 5.3 36 30-67 2-37 (336)
253 3dje_A Fructosyl amine: oxygen 98.0 2.9E-06 1E-10 91.9 5.4 37 465-503 4-41 (438)
254 3cgv_A Geranylgeranyl reductas 98.0 3.9E-06 1.3E-10 89.5 6.3 38 465-504 2-39 (397)
255 2xdo_A TETX2 protein; tetracyc 98.0 9.9E-06 3.4E-10 86.5 9.5 38 465-504 24-61 (398)
256 2gmh_A Electron transfer flavo 98.0 3.2E-05 1.1E-09 86.7 13.5 59 266-324 144-218 (584)
257 2vou_A 2,6-dihydroxypyridine h 98.0 6.2E-06 2.1E-10 88.1 7.4 36 466-503 4-39 (397)
258 1k0i_A P-hydroxybenzoate hydro 98.0 5.1E-06 1.8E-10 88.6 6.5 35 30-66 2-36 (394)
259 3i3l_A Alkylhalidase CMLS; fla 98.0 1.2E-05 4.3E-10 89.9 9.5 40 463-504 19-58 (591)
260 2aqj_A Tryptophan halogenase, 98.0 1.2E-05 4E-10 89.6 9.2 37 30-66 5-42 (538)
261 3e1t_A Halogenase; flavoprotei 98.0 6.6E-06 2.3E-10 91.0 6.9 37 466-504 6-42 (512)
262 3atr_A Conserved archaeal prot 98.0 5.9E-06 2E-10 89.9 6.4 35 30-66 6-40 (453)
263 3ihg_A RDME; flavoenzyme, anth 98.0 8.7E-06 3E-10 90.7 7.7 36 29-66 4-39 (535)
264 1yvv_A Amine oxidase, flavin-c 98.0 1.3E-05 4.4E-10 83.3 8.3 36 467-504 2-37 (336)
265 4at0_A 3-ketosteroid-delta4-5a 97.9 2.2E-05 7.4E-10 86.8 10.3 58 267-324 203-265 (510)
266 1y0p_A Fumarate reductase flav 97.9 1.1E-05 3.6E-10 90.6 7.7 35 30-66 126-160 (571)
267 3p1w_A Rabgdi protein; GDI RAB 97.9 0.00017 5.8E-09 77.8 16.7 58 265-322 255-313 (475)
268 1qo8_A Flavocytochrome C3 fuma 97.9 9.9E-06 3.4E-10 90.7 7.0 36 29-66 120-155 (566)
269 1ryi_A Glycine oxidase; flavop 97.9 1.3E-05 4.4E-10 85.0 7.1 38 463-502 13-50 (382)
270 3oz2_A Digeranylgeranylglycero 97.9 8E-06 2.7E-10 86.8 5.3 38 465-504 2-39 (397)
271 1rp0_A ARA6, thiazole biosynth 97.9 5.9E-05 2E-09 76.4 11.3 122 267-390 120-277 (284)
272 2qa1_A PGAE, polyketide oxygen 97.9 2.1E-05 7.1E-10 86.6 8.5 39 464-504 8-46 (500)
273 2e4g_A Tryptophan halogenase; 97.9 1.5E-05 5.1E-10 88.9 7.2 39 466-504 24-63 (550)
274 1d4d_A Flavocytochrome C fumar 97.9 0.00016 5.4E-09 80.9 15.3 58 266-324 255-318 (572)
275 2aqj_A Tryptophan halogenase, 97.8 2E-05 7E-10 87.7 8.0 38 466-503 4-42 (538)
276 3fmw_A Oxygenase; mithramycin, 97.8 1.6E-05 5.5E-10 88.8 6.7 36 467-504 49-84 (570)
277 1y56_B Sarcosine oxidase; dehy 97.8 2.2E-05 7.6E-10 83.2 7.2 35 466-502 4-38 (382)
278 3fpz_A Thiazole biosynthetic e 97.8 3.2E-06 1.1E-10 87.7 0.5 39 466-504 64-102 (326)
279 2gag_B Heterotetrameric sarcos 97.8 7.9E-06 2.7E-10 87.4 3.4 35 466-502 20-56 (405)
280 2qa2_A CABE, polyketide oxygen 97.8 3.3E-05 1.1E-09 85.0 8.2 37 466-504 11-47 (499)
281 2pyx_A Tryptophan halogenase; 97.8 6.2E-05 2.1E-09 83.5 10.1 43 96-138 189-235 (526)
282 3nyc_A D-arginine dehydrogenas 97.7 1.3E-05 4.5E-10 84.8 3.7 38 464-504 6-43 (381)
283 3ps9_A TRNA 5-methylaminomethy 97.7 1.9E-05 6.4E-10 90.5 5.2 36 467-504 272-307 (676)
284 3pvc_A TRNA 5-methylaminomethy 97.7 1.8E-05 6.1E-10 90.9 4.9 37 466-504 263-299 (689)
285 3atr_A Conserved archaeal prot 97.7 2.5E-05 8.7E-10 84.9 5.8 35 467-503 6-40 (453)
286 3c96_A Flavin-containing monoo 97.7 2.3E-05 7.7E-10 84.1 5.1 38 465-504 2-40 (410)
287 2dkh_A 3-hydroxybenzoate hydro 97.7 0.00011 3.6E-09 83.5 10.5 59 266-324 141-212 (639)
288 2uzz_A N-methyl-L-tryptophan o 97.7 2.7E-05 9.1E-10 82.2 4.7 35 467-503 2-36 (372)
289 2pyx_A Tryptophan halogenase; 97.7 4.9E-05 1.7E-09 84.3 7.1 43 595-637 189-235 (526)
290 3ihg_A RDME; flavoenzyme, anth 97.6 2.9E-05 9.8E-10 86.4 5.0 36 467-504 5-40 (535)
291 2weu_A Tryptophan 5-halogenase 97.6 4.4E-05 1.5E-09 84.4 6.0 37 467-503 2-39 (511)
292 4hb9_A Similarities with proba 97.6 6.3E-05 2.1E-09 80.3 6.9 36 468-505 2-37 (412)
293 2e5v_A L-aspartate oxidase; ar 97.6 5.4E-05 1.9E-09 82.6 5.9 31 469-501 1-31 (472)
294 2gmh_A Electron transfer flavo 97.6 7.5E-05 2.6E-09 83.7 6.8 38 467-504 35-76 (584)
295 4gde_A UDP-galactopyranose mut 97.5 4.3E-05 1.5E-09 84.5 4.5 54 265-321 221-274 (513)
296 1y0p_A Fumarate reductase flav 97.5 0.00011 3.8E-09 82.3 7.8 37 466-504 125-161 (571)
297 1k0i_A P-hydroxybenzoate hydro 97.5 0.00011 3.6E-09 78.3 6.8 34 468-503 3-36 (394)
298 2qcu_A Aerobic glycerol-3-phos 97.5 0.00025 8.7E-09 77.9 9.7 35 466-502 2-36 (501)
299 3jsk_A Cypbp37 protein; octame 97.5 0.00015 5.3E-09 74.4 7.1 39 466-504 78-116 (344)
300 1qo8_A Flavocytochrome C3 fuma 97.5 0.00015 5E-09 81.2 7.5 37 466-504 120-156 (566)
301 2b9w_A Putative aminooxidase; 97.4 0.00012 4.2E-09 78.7 5.9 37 29-67 5-42 (424)
302 2e1m_A L-glutamate oxidase; L- 97.4 0.00015 5E-09 76.1 5.8 38 27-66 41-79 (376)
303 2bcg_G Secretory pathway GDP d 97.4 0.00015 5.1E-09 78.7 5.8 59 265-324 241-301 (453)
304 3nks_A Protoporphyrinogen oxid 97.4 0.00012 3.9E-09 80.2 4.9 56 265-322 233-289 (477)
305 1pj5_A N,N-dimethylglycine oxi 97.3 0.0002 6.9E-09 83.9 7.2 36 466-503 3-39 (830)
306 2r0c_A REBC; flavin adenine di 97.3 0.00033 1.1E-08 77.9 8.6 37 466-504 25-61 (549)
307 3i6d_A Protoporphyrinogen oxid 97.3 8.4E-05 2.9E-09 81.0 3.7 38 30-67 5-46 (470)
308 1c0p_A D-amino acid oxidase; a 97.3 0.00016 5.5E-09 75.9 5.7 35 29-65 5-39 (363)
309 3ihm_A Styrene monooxygenase A 97.3 0.00012 4E-09 79.0 4.5 35 29-65 21-55 (430)
310 3c4a_A Probable tryptophan hyd 97.3 0.00017 5.6E-09 76.4 5.6 37 31-67 1-37 (381)
311 3kkj_A Amine oxidase, flavin-c 97.3 0.00012 4E-09 73.1 4.0 35 468-504 3-37 (336)
312 3jsk_A Cypbp37 protein; octame 97.3 0.00021 7.3E-09 73.4 5.2 37 30-66 79-115 (344)
313 2jae_A L-amino acid oxidase; o 97.3 0.00023 7.7E-09 78.1 5.9 37 29-67 10-46 (489)
314 2dkh_A 3-hydroxybenzoate hydro 97.2 0.00013 4.6E-09 82.7 3.8 37 466-504 31-68 (639)
315 2gjc_A Thiazole biosynthetic e 97.2 0.00097 3.3E-08 68.1 9.7 38 467-504 65-102 (326)
316 1rsg_A FMS1 protein; FAD bindi 97.2 0.00015 5E-09 80.3 3.9 36 30-67 8-44 (516)
317 3g3e_A D-amino-acid oxidase; F 97.2 0.00018 6.2E-09 75.1 4.5 63 264-339 140-202 (351)
318 3hdq_A UDP-galactopyranose mut 97.2 0.00024 8.2E-09 75.1 5.3 38 28-67 27-64 (397)
319 3da1_A Glycerol-3-phosphate de 97.2 0.00026 9E-09 78.8 5.7 36 466-503 17-52 (561)
320 3c96_A Flavin-containing monoo 97.2 0.00024 8.1E-09 76.0 5.0 35 30-66 4-39 (410)
321 2ivd_A PPO, PPOX, protoporphyr 97.2 0.00025 8.6E-09 77.5 4.9 38 29-68 15-52 (478)
322 3c4n_A Uncharacterized protein 97.2 0.00026 8.9E-09 75.6 4.9 67 264-332 170-246 (405)
323 1v0j_A UDP-galactopyranose mut 97.1 0.00036 1.2E-08 74.3 6.0 38 29-67 6-43 (399)
324 3lov_A Protoporphyrinogen oxid 97.1 0.00037 1.3E-08 76.1 5.7 38 30-67 4-41 (475)
325 2yg5_A Putrescine oxidase; oxi 97.1 0.00027 9.1E-09 76.7 4.4 37 30-68 5-41 (453)
326 2gjc_A Thiazole biosynthetic e 97.1 0.00036 1.2E-08 71.3 4.8 36 31-66 66-101 (326)
327 1i8t_A UDP-galactopyranose mut 97.1 0.00036 1.2E-08 73.3 4.9 34 31-66 2-35 (367)
328 3g5s_A Methylenetetrahydrofola 97.1 0.00044 1.5E-08 71.6 5.2 45 345-392 322-366 (443)
329 1sez_A Protoporphyrinogen oxid 97.1 0.00039 1.3E-08 76.5 5.3 37 29-67 12-48 (504)
330 2vvm_A Monoamine oxidase N; FA 97.0 0.00037 1.3E-08 76.5 5.0 57 265-322 254-311 (495)
331 2iid_A L-amino-acid oxidase; f 97.0 0.00056 1.9E-08 75.2 6.1 38 28-67 31-68 (498)
332 1d4d_A Flavocytochrome C fumar 97.0 0.0011 3.7E-08 74.1 7.8 36 467-504 126-161 (572)
333 2weu_A Tryptophan 5-halogenase 97.0 0.00039 1.3E-08 76.7 4.2 59 265-324 172-231 (511)
334 3k7m_X 6-hydroxy-L-nicotine ox 97.0 0.0005 1.7E-08 74.0 4.9 35 467-503 1-35 (431)
335 2bi7_A UDP-galactopyranose mut 97.0 0.00061 2.1E-08 72.1 5.4 36 30-67 3-38 (384)
336 4dgk_A Phytoene dehydrogenase; 96.9 0.00035 1.2E-08 76.9 3.5 36 467-504 1-36 (501)
337 2r0c_A REBC; flavin adenine di 96.9 0.00054 1.8E-08 76.2 5.0 35 30-66 26-60 (549)
338 2qcu_A Aerobic glycerol-3-phos 96.9 0.00053 1.8E-08 75.4 4.9 64 265-328 148-215 (501)
339 4dsg_A UDP-galactopyranose mut 96.9 0.00081 2.8E-08 73.5 5.5 37 29-67 8-45 (484)
340 1pn0_A Phenol 2-monooxygenase; 96.8 0.00094 3.2E-08 75.9 5.8 36 467-504 8-48 (665)
341 2rgh_A Alpha-glycerophosphate 96.8 0.00082 2.8E-08 75.0 5.0 66 264-329 186-256 (571)
342 1d5t_A Guanine nucleotide diss 96.7 0.0012 4.1E-08 71.0 5.6 59 265-324 233-291 (433)
343 2wdq_A Succinate dehydrogenase 96.7 0.00084 2.9E-08 75.1 4.2 35 30-66 7-41 (588)
344 2z3y_A Lysine-specific histone 96.7 0.0018 6E-08 73.7 6.6 38 27-66 104-141 (662)
345 2bs2_A Quinol-fumarate reducta 96.7 0.0012 4.1E-08 74.6 5.1 35 30-66 5-39 (660)
346 2h88_A Succinate dehydrogenase 96.6 0.0011 3.8E-08 74.4 4.5 34 30-65 18-51 (621)
347 2xag_A Lysine-specific histone 96.6 0.002 6.8E-08 74.7 6.6 37 28-66 276-312 (852)
348 3pl8_A Pyranose 2-oxidase; sub 96.6 0.0013 4.6E-08 74.0 5.0 37 30-68 46-82 (623)
349 4gut_A Lysine-specific histone 96.6 0.002 6.9E-08 74.1 6.5 36 29-66 335-370 (776)
350 1kf6_A Fumarate reductase flav 96.6 0.0015 5E-08 73.4 5.1 35 30-66 5-41 (602)
351 3t37_A Probable dehydrogenase; 96.6 0.0024 8.3E-08 70.6 6.9 37 29-66 16-52 (526)
352 1pn0_A Phenol 2-monooxygenase; 96.6 0.0012 4.2E-08 74.9 4.5 35 30-66 8-47 (665)
353 1s3e_A Amine oxidase [flavin-c 96.5 0.0014 4.7E-08 72.4 4.3 37 466-504 3-39 (520)
354 1jnr_A Adenylylsulfate reducta 96.5 0.0018 6.3E-08 73.2 5.1 35 30-66 22-60 (643)
355 2b9w_A Putative aminooxidase; 96.5 0.0016 5.5E-08 69.8 4.4 37 466-504 5-42 (424)
356 2oln_A NIKD protein; flavoprot 96.5 0.0013 4.3E-08 69.9 3.5 35 467-503 4-38 (397)
357 1b37_A Protein (polyamine oxid 96.4 0.002 7E-08 70.1 5.0 55 266-321 206-268 (472)
358 3gyx_A Adenylylsulfate reducta 96.4 0.0022 7.5E-08 72.5 5.2 42 349-390 450-491 (662)
359 1rsg_A FMS1 protein; FAD bindi 96.4 0.0017 5.9E-08 71.6 4.2 37 466-504 7-44 (516)
360 3ka7_A Oxidoreductase; structu 96.4 0.0018 6.1E-08 69.4 3.9 35 468-504 1-35 (425)
361 3nrn_A Uncharacterized protein 96.3 0.0019 6.5E-08 69.2 4.0 35 468-504 1-35 (421)
362 3lov_A Protoporphyrinogen oxid 96.3 0.002 6.8E-08 70.2 4.2 38 466-503 3-40 (475)
363 1chu_A Protein (L-aspartate ox 96.3 0.0024 8.3E-08 70.6 4.8 34 30-66 8-41 (540)
364 2bcg_G Secretory pathway GDP d 96.3 0.0023 8E-08 69.2 4.5 37 466-504 10-46 (453)
365 1c0p_A D-amino acid oxidase; a 96.3 0.0018 6.3E-08 67.7 3.6 35 466-502 5-39 (363)
366 1kdg_A CDH, cellobiose dehydro 96.3 0.0026 8.8E-08 70.7 4.9 38 28-67 5-42 (546)
367 3nks_A Protoporphyrinogen oxid 96.3 0.002 6.7E-08 70.3 3.7 36 467-504 2-39 (477)
368 3c4a_A Probable tryptophan hyd 96.3 0.0022 7.5E-08 67.7 4.0 37 468-504 1-37 (381)
369 4gde_A UDP-galactopyranose mut 96.3 0.0019 6.5E-08 71.1 3.6 38 595-632 235-273 (513)
370 3ayj_A Pro-enzyme of L-phenyla 96.3 0.0019 6.5E-08 72.9 3.6 36 30-67 56-100 (721)
371 3ihm_A Styrene monooxygenase A 96.3 0.0018 6E-08 69.7 3.1 33 468-502 23-55 (430)
372 3g5s_A Methylenetetrahydrofola 96.3 0.0024 8.2E-08 66.2 3.9 35 467-503 1-35 (443)
373 3i6d_A Protoporphyrinogen oxid 96.2 0.0017 5.8E-08 70.5 2.8 38 467-504 5-46 (470)
374 2e1m_A L-glutamate oxidase; L- 96.2 0.003 1E-07 66.1 4.4 37 465-503 42-79 (376)
375 2yg5_A Putrescine oxidase; oxi 96.2 0.0029 9.8E-08 68.5 4.2 37 466-504 4-40 (453)
376 1v0j_A UDP-galactopyranose mut 96.1 0.0034 1.2E-07 66.6 4.5 38 466-504 6-43 (399)
377 2gf3_A MSOX, monomeric sarcosi 96.1 0.003 1E-07 66.6 3.8 35 467-503 3-37 (389)
378 3g3e_A D-amino-acid oxidase; F 96.1 0.0027 9.2E-08 66.1 3.3 35 468-502 1-39 (351)
379 3hdq_A UDP-galactopyranose mut 96.0 0.004 1.4E-07 65.7 4.4 37 466-504 28-64 (397)
380 3c4n_A Uncharacterized protein 96.0 0.0034 1.2E-07 66.9 3.9 36 467-502 36-71 (405)
381 3axb_A Putative oxidoreductase 96.0 0.0023 7.8E-08 69.2 2.6 36 465-502 21-57 (448)
382 1i8t_A UDP-galactopyranose mut 95.9 0.0044 1.5E-07 65.0 4.2 35 467-503 1-35 (367)
383 2bi7_A UDP-galactopyranose mut 95.9 0.004 1.4E-07 65.8 3.7 36 467-504 3-38 (384)
384 3qvp_A Glucose oxidase; oxidor 95.9 0.0053 1.8E-07 68.2 4.7 38 28-66 17-54 (583)
385 2jae_A L-amino acid oxidase; o 95.8 0.0048 1.6E-07 67.4 4.3 36 466-503 10-45 (489)
386 2vvm_A Monoamine oxidase N; FA 95.8 0.0058 2E-07 66.9 4.7 35 468-504 40-74 (495)
387 2ivd_A PPO, PPOX, protoporphyr 95.8 0.0049 1.7E-07 67.1 4.0 37 466-504 15-51 (478)
388 1ju2_A HydroxynitrIle lyase; f 95.8 0.004 1.4E-07 68.8 3.1 36 29-67 25-60 (536)
389 1sez_A Protoporphyrinogen oxid 95.7 0.005 1.7E-07 67.6 3.9 37 466-504 12-48 (504)
390 3q9t_A Choline dehydrogenase a 95.7 0.0065 2.2E-07 67.5 4.6 37 29-66 5-41 (577)
391 4at0_A 3-ketosteroid-delta4-5a 95.7 0.0054 1.8E-07 67.5 3.9 37 466-504 40-76 (510)
392 4dsg_A UDP-galactopyranose mut 95.6 0.0063 2.2E-07 66.4 4.0 37 466-504 8-45 (484)
393 2iid_A L-amino-acid oxidase; f 95.4 0.01 3.5E-07 65.0 4.6 37 466-504 32-68 (498)
394 3p1w_A Rabgdi protein; GDI RAB 95.4 0.0096 3.3E-07 64.2 4.3 39 464-504 17-55 (475)
395 1d5t_A Guanine nucleotide diss 95.3 0.011 3.7E-07 63.5 4.6 37 465-503 4-40 (433)
396 1coy_A Cholesterol oxidase; ox 95.3 0.013 4.5E-07 64.2 5.4 38 28-67 9-46 (507)
397 3pl8_A Pyranose 2-oxidase; sub 95.2 0.0093 3.2E-07 67.0 3.8 37 466-504 45-81 (623)
398 2wdq_A Succinate dehydrogenase 95.2 0.01 3.5E-07 66.3 3.9 35 467-503 7-41 (588)
399 2h88_A Succinate dehydrogenase 95.2 0.0096 3.3E-07 66.8 3.7 36 466-503 17-52 (621)
400 1n4w_A CHOD, cholesterol oxida 95.1 0.014 4.8E-07 63.9 4.5 38 29-68 4-41 (504)
401 2bs2_A Quinol-fumarate reducta 95.0 0.011 3.9E-07 66.7 3.8 36 466-503 4-39 (660)
402 1jnr_A Adenylylsulfate reducta 94.9 0.016 5.6E-07 65.4 4.5 36 466-503 21-60 (643)
403 1gpe_A Protein (glucose oxidas 94.9 0.021 7.2E-07 63.7 5.3 38 29-67 23-60 (587)
404 2rgh_A Alpha-glycerophosphate 94.9 0.014 4.9E-07 64.9 3.9 34 467-502 32-65 (571)
405 1kf6_A Fumarate reductase flav 94.8 0.014 4.7E-07 65.4 3.5 37 467-503 5-41 (602)
406 3fwz_A Inner membrane protein 94.7 0.032 1.1E-06 49.3 5.2 36 29-66 6-41 (140)
407 3fim_B ARYL-alcohol oxidase; A 94.6 0.014 4.6E-07 64.8 2.8 37 30-67 2-38 (566)
408 2jbv_A Choline oxidase; alcoho 94.6 0.023 8E-07 62.8 4.6 38 29-67 12-49 (546)
409 2g1u_A Hypothetical protein TM 94.5 0.038 1.3E-06 49.8 5.2 36 29-66 18-53 (155)
410 1lss_A TRK system potassium up 94.5 0.03 1E-06 49.1 4.4 34 30-65 4-37 (140)
411 3ic5_A Putative saccharopine d 94.5 0.031 1.1E-06 47.3 4.3 34 30-65 5-39 (118)
412 3gyx_A Adenylylsulfate reducta 94.5 0.021 7.1E-07 64.5 4.0 37 467-503 22-62 (662)
413 1b37_A Protein (polyamine oxid 94.4 0.023 7.9E-07 61.7 4.1 36 466-503 3-39 (472)
414 3llv_A Exopolyphosphatase-rela 94.4 0.034 1.2E-06 49.1 4.5 34 30-65 6-39 (141)
415 1kdg_A CDH, cellobiose dehydro 94.4 0.021 7.3E-07 63.2 3.8 36 466-503 6-41 (546)
416 4gut_A Lysine-specific histone 94.3 0.028 9.7E-07 64.6 4.6 37 466-504 335-371 (776)
417 1chu_A Protein (L-aspartate ox 94.2 0.021 7.3E-07 63.0 3.4 34 467-503 8-41 (540)
418 3t37_A Probable dehydrogenase; 94.1 0.023 7.8E-07 62.6 3.3 35 467-502 17-51 (526)
419 2z3y_A Lysine-specific histone 94.0 0.034 1.2E-06 63.1 4.7 38 465-504 105-142 (662)
420 1id1_A Putative potassium chan 94.0 0.062 2.1E-06 48.2 5.4 34 30-65 3-36 (153)
421 3q9t_A Choline dehydrogenase a 93.8 0.03 1E-06 62.2 3.6 37 466-503 5-41 (577)
422 3qvp_A Glucose oxidase; oxidor 93.8 0.029 1E-06 62.2 3.5 36 466-502 18-53 (583)
423 2xag_A Lysine-specific histone 93.7 0.043 1.5E-06 63.6 4.6 38 465-504 276-313 (852)
424 3fim_B ARYL-alcohol oxidase; A 93.6 0.035 1.2E-06 61.4 3.5 36 467-503 2-37 (566)
425 1f0y_A HCDH, L-3-hydroxyacyl-C 93.5 0.075 2.6E-06 53.8 5.7 36 29-66 14-49 (302)
426 1ju2_A HydroxynitrIle lyase; f 93.5 0.032 1.1E-06 61.5 3.1 35 466-503 25-59 (536)
427 3dfz_A SIRC, precorrin-2 dehyd 93.4 0.085 2.9E-06 50.4 5.4 35 29-65 30-64 (223)
428 3ayj_A Pro-enzyme of L-phenyla 93.1 0.035 1.2E-06 62.7 2.6 38 467-504 56-100 (721)
429 1coy_A Cholesterol oxidase; ox 92.8 0.073 2.5E-06 58.2 4.6 37 465-503 9-45 (507)
430 3llv_A Exopolyphosphatase-rela 92.7 0.055 1.9E-06 47.7 2.9 35 466-502 5-39 (141)
431 2hmt_A YUAA protein; RCK, KTN, 92.6 0.1 3.4E-06 45.8 4.5 34 30-65 6-39 (144)
432 3l4b_C TRKA K+ channel protien 92.3 0.081 2.8E-06 50.6 3.7 34 31-66 1-34 (218)
433 1kyq_A Met8P, siroheme biosynt 92.2 0.087 3E-06 52.0 3.7 35 29-65 12-46 (274)
434 1n4w_A CHOD, cholesterol oxida 92.2 0.078 2.7E-06 58.0 3.8 36 466-503 4-39 (504)
435 1gpe_A Protein (glucose oxidas 91.6 0.092 3.1E-06 58.5 3.6 37 466-503 23-59 (587)
436 2a9f_A Putative malic enzyme ( 91.4 0.19 6.5E-06 51.9 5.3 35 29-65 187-222 (398)
437 4dio_A NAD(P) transhydrogenase 91.4 0.19 6.6E-06 52.4 5.4 36 29-66 189-224 (405)
438 2x5o_A UDP-N-acetylmuramoylala 91.0 0.13 4.5E-06 55.0 3.9 35 30-66 5-39 (439)
439 3p2y_A Alanine dehydrogenase/p 91.0 0.21 7.1E-06 51.7 5.2 36 29-66 183-218 (381)
440 4g65_A TRK system potassium up 91.0 0.091 3.1E-06 56.5 2.6 36 29-66 2-37 (461)
441 3eag_A UDP-N-acetylmuramate:L- 90.7 0.23 7.8E-06 50.8 5.2 37 28-66 2-39 (326)
442 1vg0_A RAB proteins geranylger 90.6 0.24 8.4E-06 55.1 5.7 62 265-326 377-440 (650)
443 3vtf_A UDP-glucose 6-dehydroge 90.6 0.32 1.1E-05 51.5 6.3 39 26-66 17-55 (444)
444 1vl6_A Malate oxidoreductase; 90.6 0.25 8.5E-06 50.9 5.3 34 29-64 191-225 (388)
445 3lk7_A UDP-N-acetylmuramoylala 90.3 0.2 6.9E-06 53.8 4.6 34 30-65 9-42 (451)
446 1id1_A Putative potassium chan 90.2 0.2 6.7E-06 44.8 3.8 34 467-502 3-36 (153)
447 1lld_A L-lactate dehydrogenase 90.1 0.27 9.1E-06 50.1 5.2 34 30-65 7-42 (319)
448 2jbv_A Choline oxidase; alcoho 90.1 0.15 5.2E-06 56.2 3.5 36 467-503 13-48 (546)
449 3c85_A Putative glutathione-re 89.8 0.34 1.1E-05 44.7 5.2 35 30-65 39-73 (183)
450 4ffl_A PYLC; amino acid, biosy 89.8 0.31 1E-05 50.6 5.4 35 30-66 1-35 (363)
451 1lss_A TRK system potassium up 89.5 0.2 7E-06 43.5 3.3 33 468-502 5-37 (140)
452 3i83_A 2-dehydropantoate 2-red 89.5 0.33 1.1E-05 49.4 5.3 33 31-65 3-35 (320)
453 1pzg_A LDH, lactate dehydrogen 89.5 0.43 1.5E-05 48.7 6.1 35 30-66 9-44 (331)
454 2hmt_A YUAA protein; RCK, KTN, 89.4 0.19 6.5E-06 44.0 3.0 35 466-502 5-39 (144)
455 3ic5_A Putative saccharopine d 89.4 0.18 6.2E-06 42.4 2.8 34 467-502 5-39 (118)
456 2y0c_A BCEC, UDP-glucose dehyd 89.4 0.32 1.1E-05 52.5 5.2 34 30-65 8-41 (478)
457 4e12_A Diketoreductase; oxidor 89.3 0.33 1.1E-05 48.4 5.0 35 30-66 4-38 (283)
458 2raf_A Putative dinucleotide-b 89.2 0.41 1.4E-05 45.3 5.4 36 29-66 18-53 (209)
459 3doj_A AT3G25530, dehydrogenas 89.1 0.39 1.3E-05 48.6 5.5 37 27-65 18-54 (310)
460 1ks9_A KPA reductase;, 2-dehyd 88.8 0.39 1.3E-05 47.9 5.2 34 31-66 1-34 (291)
461 2dpo_A L-gulonate 3-dehydrogen 88.8 0.31 1.1E-05 49.5 4.4 35 30-66 6-40 (319)
462 3ado_A Lambda-crystallin; L-gu 88.6 0.33 1.1E-05 49.1 4.4 35 30-66 6-40 (319)
463 1x13_A NAD(P) transhydrogenase 88.6 0.4 1.4E-05 50.4 5.2 35 30-66 172-206 (401)
464 2ew2_A 2-dehydropantoate 2-red 88.6 0.4 1.4E-05 48.5 5.1 34 30-65 3-36 (316)
465 3gg2_A Sugar dehydrogenase, UD 88.5 0.39 1.3E-05 51.4 5.1 34 31-66 3-36 (450)
466 2ewd_A Lactate dehydrogenase,; 88.5 0.51 1.7E-05 47.9 5.8 35 30-66 4-39 (317)
467 3ius_A Uncharacterized conserv 88.4 0.43 1.5E-05 47.4 5.1 35 29-65 4-38 (286)
468 3k6j_A Protein F01G10.3, confi 88.4 0.61 2.1E-05 49.7 6.5 37 28-66 52-88 (460)
469 2g1u_A Hypothetical protein TM 88.4 0.27 9.1E-06 44.0 3.2 34 467-502 19-52 (155)
470 3fwz_A Inner membrane protein 88.2 0.3 1E-05 42.8 3.4 34 468-503 8-41 (140)
471 3dtt_A NADP oxidoreductase; st 88.0 0.49 1.7E-05 46.0 5.1 40 25-66 14-53 (245)
472 1l7d_A Nicotinamide nucleotide 88.0 0.5 1.7E-05 49.4 5.5 36 29-66 171-206 (384)
473 3hn2_A 2-dehydropantoate 2-red 87.8 0.37 1.3E-05 48.9 4.2 33 31-65 3-35 (312)
474 1guz_A Malate dehydrogenase; o 87.7 0.53 1.8E-05 47.6 5.4 36 31-66 1-36 (310)
475 3oj0_A Glutr, glutamyl-tRNA re 87.7 0.26 9E-06 43.4 2.7 34 30-65 21-54 (144)
476 2v6b_A L-LDH, L-lactate dehydr 87.5 0.51 1.7E-05 47.6 5.0 33 31-65 1-35 (304)
477 1y6j_A L-lactate dehydrogenase 87.5 0.54 1.8E-05 47.7 5.2 34 30-65 7-42 (318)
478 2i6t_A Ubiquitin-conjugating e 87.4 0.57 2E-05 47.1 5.3 35 29-65 13-49 (303)
479 1t2d_A LDH-P, L-lactate dehydr 87.2 0.64 2.2E-05 47.2 5.6 35 30-66 4-39 (322)
480 2q3e_A UDP-glucose 6-dehydroge 87.1 0.53 1.8E-05 50.7 5.2 36 30-65 5-40 (467)
481 4a7p_A UDP-glucose dehydrogena 87.1 0.57 2E-05 49.9 5.3 35 30-66 8-42 (446)
482 3l9w_A Glutathione-regulated p 87.0 0.45 1.5E-05 50.2 4.4 35 30-66 4-38 (413)
483 3g17_A Similar to 2-dehydropan 87.0 0.47 1.6E-05 47.6 4.4 34 30-65 2-35 (294)
484 2hjr_A Malate dehydrogenase; m 86.9 0.65 2.2E-05 47.4 5.4 35 30-66 14-49 (328)
485 1pjq_A CYSG, siroheme synthase 86.8 0.49 1.7E-05 50.7 4.7 34 30-65 12-45 (457)
486 1jw9_B Molybdopterin biosynthe 86.7 0.65 2.2E-05 45.3 5.1 34 30-65 31-65 (249)
487 3phh_A Shikimate dehydrogenase 86.7 0.7 2.4E-05 45.5 5.3 35 30-66 118-152 (269)
488 3k96_A Glycerol-3-phosphate de 86.7 0.55 1.9E-05 48.5 4.8 35 30-66 29-63 (356)
489 2o3j_A UDP-glucose 6-dehydroge 86.6 0.57 1.9E-05 50.6 5.1 37 30-66 9-45 (481)
490 4dll_A 2-hydroxy-3-oxopropiona 86.4 0.58 2E-05 47.6 4.8 35 29-65 30-64 (320)
491 1pjc_A Protein (L-alanine dehy 86.4 0.61 2.1E-05 48.3 5.0 34 30-65 167-200 (361)
492 3ghy_A Ketopantoate reductase 86.3 0.63 2.2E-05 47.6 5.1 34 30-65 3-36 (335)
493 3pqe_A L-LDH, L-lactate dehydr 86.3 0.8 2.7E-05 46.5 5.7 35 29-65 4-40 (326)
494 2vns_A Metalloreductase steap3 86.3 0.68 2.3E-05 44.0 4.9 34 30-65 28-61 (215)
495 1mv8_A GMD, GDP-mannose 6-dehy 86.2 0.5 1.7E-05 50.4 4.4 34 31-66 1-34 (436)
496 3pef_A 6-phosphogluconate dehy 86.1 0.66 2.3E-05 46.3 5.0 34 31-66 2-35 (287)
497 3qha_A Putative oxidoreductase 86.1 0.5 1.7E-05 47.4 4.1 35 30-66 15-49 (296)
498 1bg6_A N-(1-D-carboxylethyl)-L 86.0 0.69 2.4E-05 47.7 5.2 34 30-65 4-37 (359)
499 3e8x_A Putative NAD-dependent 85.8 0.71 2.4E-05 44.3 4.9 35 29-65 20-55 (236)
500 3ew7_A LMO0794 protein; Q8Y8U8 85.8 0.77 2.6E-05 43.3 5.1 33 31-65 1-34 (221)
No 1
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=6.9e-49 Score=428.57 Aligned_cols=371 Identities=19% Similarity=0.284 Sum_probs=308.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCcccccccccccC-CCcEEEEceeEEE
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVSF 108 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~i~~~v~~i 108 (706)
.++|||||||+||++||.+|++..++++|||||++++|+|+|+++++..+..+.+++..++.++++ .+++|++++|++|
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~~v~~I 81 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESI 81 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEeEEEEE
Confidence 358999999999999999999987779999999999999999999998899999999999988876 5899999999999
Q ss_pred EcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCC
Q psy8791 109 DPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQP 188 (706)
Q Consensus 109 d~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 188 (706)
|+++++|++++|++++||+||||||++.. +++||.+ ||+
T Consensus 82 d~~~~~V~~~~g~~i~YD~LViAtG~~~~-~~i~G~~--e~~-------------------------------------- 120 (430)
T 3hyw_A 82 DPDANTVTTQSGKKIEYDYLVIATGPKLV-FGAEGQE--ENS-------------------------------------- 120 (430)
T ss_dssp ETTTTEEEETTCCEEECSEEEECCCCEEE-CCSBTHH--HHS--------------------------------------
T ss_pred ECCCCEEEECCCCEEECCEEEEeCCCCcc-CCccCcc--cCc--------------------------------------
Confidence 99999999999999999999999999865 5688821 222
Q ss_pred CCCcccCCChhHHHHHHHHHHhcc-CCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC---
Q psy8791 189 DSGVSTNYSPQYVEKTLRNLQHFQ-SGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--- 264 (706)
Q Consensus 189 ~~~v~~~~~~~~~~~~~~~l~~~~-~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--- 264 (706)
..+++.+++.++++.+.++. +...++..+..+++|+|.+.+.+.....++++.+.+.++++++++..+.+..
T Consensus 121 ----~~~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~ 196 (430)
T 3hyw_A 121 ----TSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGV 196 (430)
T ss_dssp ----CCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTT
T ss_pred ----CCcccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchhhhccc
Confidence 23345667777777777653 3334454555689999999999999999999999888889999998876532
Q ss_pred --chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCC-CceEEeecEEEECCCCCchhhhhcCCC---CCCCCc
Q psy8791 265 --SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSED-KTERLPYAIMHVTPPMGPVPELATSRL---VDQSGY 338 (706)
Q Consensus 265 --~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~-~g~~i~~D~vI~a~G~~~~~~~~~~~l---~~~~G~ 338 (706)
.+...+.+++.++++||++++++.|++++.++ +++...+ +++++++|++||++|++|++++..+++ .+.+|+
T Consensus 197 ~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~~~--~~~~~~~g~~~~i~~d~vi~~~G~~~~~~~~~~~~~l~~~~~g~ 274 (430)
T 3hyw_A 197 GGIGASKRLVEDLFAERNIDWIANVAVKAIEPDK--VIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKM 274 (430)
T ss_dssp TCSTTHHHHHHHHHHHTTCEEECSCEEEEECSSE--EEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTTBCTTTCC
T ss_pred hhhHHHHHHHHHHHHhCCeEEEeCceEEEEeCCc--eEEEeeCCCceEeecceEEEeccCCCchHHHhcccccccCCceE
Confidence 46778889999999999999999999998754 6655433 456899999999999999998888753 355678
Q ss_pred eeeCccccccCCCCCEEEccccCCCC----------CCchHHHHHHhHHHHHHHHHHHHcCCCCCCcccceeeEEEEecC
Q psy8791 339 VNVDKATLQHVKYSNVFAIGDCSNLP----------TSKTAAAVAGQCKVVYDNLSAVMKNRALPHEYNGYTSCPLVTGY 408 (706)
Q Consensus 339 i~vd~~~l~~~~~~~Ifa~GD~~~~~----------~~~~~~~a~~qg~~~a~ni~~~l~g~~~~~~~~~~~~~~~~~G~ 408 (706)
+.||+ +||++++|||||+|||+..| .|++++.|.+||+++|+||.+.++|++.++.+.....|++++|.
T Consensus 275 i~vd~-~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~~~~~~~~~~~~~~~~~G~ 353 (430)
T 3hyw_A 275 VIVNR-CFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYAPRLSAICIADFGE 353 (430)
T ss_dssp BCCCT-TSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCCCEEECCCEEEEEECSS
T ss_pred EEecc-cccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCcccCCcEEEEEEcCC
Confidence 99998 89999999999999999875 36899999999999999999999999987777778899999999
Q ss_pred CeEEEEEEeCCCCcccCCCCCCCCchhHHHHHHHhhchHHHHHH
Q psy8791 409 SKCVMAEFDYTLKPLETFPVDQSKERSLMFQMKKQVMPFLYWNL 452 (706)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~ 452 (706)
+.+++..+... +.........+++.||+|..+++|++|+.
T Consensus 354 ~~~~~~~~~~~----~~~~~~~~~~g~~~~~~K~~~~~~~~w~~ 393 (430)
T 3hyw_A 354 DAGFFFADPVI----PPRERVITKMGKWAHYFKTAFEKYFLWKV 393 (430)
T ss_dssp SEEEEEEESSS----SSCSEEEEEEEHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcccC----CccccccccccHHHHHHHHHHHHHHHHHH
Confidence 99886554321 12222334567899999998888888874
No 2
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=2e-48 Score=422.30 Aligned_cols=387 Identities=22% Similarity=0.328 Sum_probs=317.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCcccccccccccCCCcEEEEceeEEEE
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 109 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~v~~id 109 (706)
.+||||||||+||++||.+|++..++.+|||||++++|+++|+++.+..+..+.+++..+++.+.+.+++|++++|+.||
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~~v~~id 81 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHDSALGID 81 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECSCEEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEeEEEEEE
Confidence 37899999999999999999998667899999999999999999998888888888888888888899999999999999
Q ss_pred cCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCC
Q psy8791 110 PENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPD 189 (706)
Q Consensus 110 ~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 189 (706)
++++++.+.+|.++.||+||+|||++++++.+||.+ +.....
T Consensus 82 ~~~~~v~~~~g~~i~yd~LviAtG~~~~~~~i~G~~-------------------------------------e~~~~~- 123 (401)
T 3vrd_B 82 PDKKLVKTAGGAEFAYDRCVVAPGIDLLYDKIEGYS-------------------------------------EALAAK- 123 (401)
T ss_dssp TTTTEEEETTSCEEECSEEEECCCEEECGGGSBTCC-------------------------------------SGGGGT-
T ss_pred ccCcEEEecccceeecceeeeccCCccccCCccCch-------------------------------------hhcccC-
Confidence 999999999999999999999999999999999932 111111
Q ss_pred CCcccCCChhHHHHHHHHHHhccCC-CEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCCc---
Q psy8791 190 SGVSTNYSPQYVEKTLRNLQHFQSG-PVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFPS--- 265 (706)
Q Consensus 190 ~~v~~~~~~~~~~~~~~~l~~~~~g-~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~~--- 265 (706)
.+......+.+..+++.+..+..+ ..+++.+..++.|++++.+.++...+++++.+.+ .+|++++..+.++..
T Consensus 124 -~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~--~~v~i~~~~~~~~~~~~~ 200 (401)
T 3vrd_B 124 -LPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSK--SKVIILDNSQTFSKQAQF 200 (401)
T ss_dssp -SCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTT--CEEEEECSSSSCTTHHHH
T ss_pred -ccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCC--CEEEEEcccccccccccc
Confidence 234455667788888888888654 4567788899999999999999999999988754 468999988887653
Q ss_pred -hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhcCCCCCCCCceeeCcc
Q psy8791 266 -PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELATSRLVDQSGYVNVDKA 344 (706)
Q Consensus 266 -~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~~l~~~~G~i~vd~~ 344 (706)
+.+.+.+.+.+++.||++++++++..++.+.+...+ .+++|+++++|++++++|.+|++++.++++.+++|+|.||++
T Consensus 201 ~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v-~~~~g~~i~~D~vi~~~g~~~~~~~~~~gl~~~~G~i~VD~~ 279 (401)
T 3vrd_B 201 TKGWERLYGFGTENALIEWHPGPDAAVVKTDTEAMTV-ETSFGETFKAAVINLIPPQRAGKIAQSASLTNDSGWCPVDIR 279 (401)
T ss_dssp HHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTTTEE-EETTSCEEECSEEEECCCEEECHHHHHTTCCCTTSSBCBCTT
T ss_pred cHHHHHHHHHHHHhcCcEEEeCceEEEEEecccceEE-EcCCCcEEEeeEEEEecCcCCchhHhhccccccCCCEEECCC
Confidence 344444555678899999999998888754432232 245889999999999999999999999999999999999997
Q ss_pred ccccCCCCCEEEccccCCC-CCCchHHHHHHhHHHHHHHHHHHHcCCCC-CCcccceeeEEEEecCCeEEEEEEeCCCC-
Q psy8791 345 TLQHVKYSNVFAIGDCSNL-PTSKTAAAVAGQCKVVYDNLSAVMKNRAL-PHEYNGYTSCPLVTGYSKCVMAEFDYTLK- 421 (706)
Q Consensus 345 ~l~~~~~~~Ifa~GD~~~~-~~~~~~~~a~~qg~~~a~ni~~~l~g~~~-~~~~~~~~~~~~~~G~~~~~~~~~~~~~~- 421 (706)
+||++++|||||+|||+.. |.|++++.|..||+++|+||.+.++|+++ ++.|.++..|++..|.+..++..|+|...
T Consensus 280 tl~~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l~G~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~g 359 (401)
T 3vrd_B 280 TFESSLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALLKGEEPGTPSYLNTCYSILAPGYGISIAAVYRPNAEG 359 (401)
T ss_dssp TCBBSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHHHTCCCCCCCEEEEEEEEEETTEEEEEEEEEEECTTS
T ss_pred cceecCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCeEEEEEecCCceEEEEEecccCCC
Confidence 7999999999999999864 67899999999999999999999999876 78899999999999999888888877643
Q ss_pred -cccCCCCC--CCCchhHHHHHHHhhchHHHHH-Hhhccee
Q psy8791 422 -PLETFPVD--QSKERSLMFQMKKQVMPFLYWN-LMLRGYW 458 (706)
Q Consensus 422 -~~~~~~~~--~~~~~~~~~~l~~~~~~~~y~~-~~~~~~~ 458 (706)
....++.. ....+...|.+++......+|. .|.+++|
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~d~f 400 (401)
T 3vrd_B 360 KAIEAVPDSGGITPVDAPDWVLEREVQYAHSWYNNIVHDTF 400 (401)
T ss_dssp SSEEECTTCCEESCTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecccCCcccccchhHHHhccchhHHHHHHHHHHhhc
Confidence 33333321 2334566777777666666774 4555443
No 3
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=4.3e-43 Score=388.13 Aligned_cols=344 Identities=18% Similarity=0.268 Sum_probs=253.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCccccccccccc---CCCcEEEEce
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL---PSGATWVKDK 104 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~i~~~ 104 (706)
.++++|||||||+||+++|.+|++. +++|||||++++|+|+|+++.+..|..++.++..|+..+. ..+++|++++
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~--~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~~ 117 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTK--KYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAE 117 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTT--TCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEEE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhC--CCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEEE
Confidence 4567999999999999999999987 8999999999999999999999888888888888877654 2589999999
Q ss_pred eEEEEcCCCEEEeC--------------------CCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccC
Q psy8791 105 IVSFDPENNRVRTQ--------------------AGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFP 164 (706)
Q Consensus 105 v~~id~~~~~v~~~--------------------~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 164 (706)
|++||+++++|++. ++.++.||+||||||+.++++++||++ ||++.
T Consensus 118 v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~--e~a~~------------ 183 (502)
T 4g6h_A 118 ATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVT--DYGHF------------ 183 (502)
T ss_dssp EEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHH--HHCEE------------
T ss_pred EEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCccCcc--cccCC------------
Confidence 99999999988763 356899999999999999999999943 55532
Q ss_pred ccCCccccc-cccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhH--HHHHHHHHH
Q psy8791 165 LFFPRRTLD-FLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPM--KAVLIGDEY 241 (706)
Q Consensus 165 ~~~~~~~~~-~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~--~~~~~~~~~ 241 (706)
+++++ +.+.++++...+... ... ...+ ...+.+. ..+.++|++. |.+....++
T Consensus 184 ----l~t~~dA~~ir~~l~~~~e~a--~~~--~~~~---~~~~~~~-------------~vvVvGgG~tGvE~A~~l~~~ 239 (502)
T 4g6h_A 184 ----LKEIPNSLEIRRTFAANLEKA--NLL--PKGD---PERRRLL-------------SIVVVGGGPTGVEAAGELQDY 239 (502)
T ss_dssp ----CSSHHHHHHHHHHHHHHHHHH--HHS--CTTC---HHHHHHT-------------EEEEECCSHHHHHHHHHHHHH
T ss_pred ----CCCHHHHHHHHHHHHHHHHHH--hcc--cccc---hhhcccc-------------ceEEECCCcchhhhHHHHHHH
Confidence 22222 111111111111000 000 0000 0000010 1122344433 333222222
Q ss_pred HH----HcC--CCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEE-eCCCc----e
Q psy8791 242 LR----KHK--KRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFK-SEDKT----E 308 (706)
Q Consensus 242 l~----~~g--~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~-~~~~g----~ 308 (706)
.+ +.. ...+++|+++++.+++++ ++.+.+.+++.|+++||+++++++|++++.++ +... ...+| +
T Consensus 240 ~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~~--~~~~~~~~dg~~~~~ 317 (502)
T 4g6h_A 240 VHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQ--LLAKTKHEDGKITEE 317 (502)
T ss_dssp HHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEETTEEEEEECSSE--EEEEEECTTSCEEEE
T ss_pred HHHHHHhhcccccccceeEEeccccccccCCCHHHHHHHHHHHHhcceeeecCceEEEEeCCc--eEEEEEecCccccee
Confidence 21 110 123457999999999987 78999999999999999999999999998765 3332 23344 4
Q ss_pred EEeecEEEECCCCCchhhhhc----CCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHH
Q psy8791 309 RLPYAIMHVTPPMGPVPELAT----SRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNL 383 (706)
Q Consensus 309 ~i~~D~vI~a~G~~~~~~~~~----~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni 383 (706)
++++|+||||+|++|++.+.+ .++ .+.+|+|.||+ +||++++|||||+|||+..+.|++++.|.+||+++|+||
T Consensus 318 ~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~-~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni 396 (502)
T 4g6h_A 318 TIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVND-FLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNF 396 (502)
T ss_dssp EEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCT-TSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHH
T ss_pred eeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECC-ccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHH
Confidence 799999999999999965443 344 67789999999 899889999999999999999999999999999999999
Q ss_pred HHH--------------------HcCCCC-CCcccceeeEEEEecCCeEEEEE
Q psy8791 384 SAV--------------------MKNRAL-PHEYNGYTSCPLVTGYSKCVMAE 415 (706)
Q Consensus 384 ~~~--------------------l~g~~~-~~~~~~~~~~~~~~G~~~~~~~~ 415 (706)
.+. +.++++ ||.|...++++ ++|.+.|++.-
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~y~~~G~~a-~lG~~~av~~~ 448 (502)
T 4g6h_A 397 DKMAQIPNFQKNLSSRKDKIDLLFEENNFKPFKYNDLGALA-YLGSERAIATI 448 (502)
T ss_dssp HHHTTCHHHHHHTTSSSCCHHHHHHHTTCCCCCCCCCEEEE-ECSTTCEEEEE
T ss_pred HHHhccchhhhhhhhccchhhhhhcCCCCCCCEecCcceEE-EEeCCceEEEc
Confidence 764 345555 88999888866 99999998543
No 4
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=7.6e-42 Score=374.12 Aligned_cols=390 Identities=19% Similarity=0.288 Sum_probs=303.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhh-cCCCeEEEEcCCCCcccCcccccccCccccCcccccccccccC-CCcEEEEceeEE
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSK-LGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVS 107 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~-~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~i~~~v~~ 107 (706)
+++|||||||+||++||..|++. ..+++|||||+++++.|.|+++.+..+....+++..++.+++. .+++++.++|+.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~~~v~~ 83 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQSAEQ 83 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEECSCEEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEEeEEEE
Confidence 57999999999999999999992 1389999999999999999988887777777777777777664 799999999999
Q ss_pred EEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcC
Q psy8791 108 FDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQ 187 (706)
Q Consensus 108 id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 187 (706)
||++.+.|.+++++++.||+||+|||+.++.+.+||.+ ....
T Consensus 84 id~~~~~V~~~~g~~i~~d~lviAtG~~~~~~~ipG~~-------------------------------------~~~~- 125 (437)
T 3sx6_A 84 IDAEAQNITLADGNTVHYDYLMIATGPKLAFENVPGSD-------------------------------------PHEG- 125 (437)
T ss_dssp EETTTTEEEETTSCEEECSEEEECCCCEECGGGSTTCS-------------------------------------TTTS-
T ss_pred EEcCCCEEEECCCCEEECCEEEECCCCCcCcccCCCCC-------------------------------------cccC-
Confidence 99999999999998899999999999999988999932 1000
Q ss_pred CCCCcccCCChhHHHHHHHHHHhc--cCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcE-EEEEeCCCcC--
Q psy8791 188 PDSGVSTNYSPQYVEKTLRNLQHF--QSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAK-LTYCTGMGVL-- 262 (706)
Q Consensus 188 ~~~~v~~~~~~~~~~~~~~~l~~~--~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~-v~l~~~~~~~-- 262 (706)
....+++.+++..+++.+..+ ..+.+|++.+.. ..|.|++.|.++.+...+++.|.+.+++ |+++++.+.+
T Consensus 126 ---~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~-~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~ 201 (437)
T 3sx6_A 126 ---PVQSICTVDHAERAFAEYQALLREPGPIVIGAMAG-ASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGH 201 (437)
T ss_dssp ---SEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTT-CCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTC
T ss_pred ---cceecccccHHHHHHHHHHHHHhCCCEEEEEcCCC-CCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccc
Confidence 222345566666776666654 345566766543 3577778899988889999998877777 9999998876
Q ss_pred --CC-chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEe-CCC-----ceEEeecEEEECCCCCchhhhhc-CCC
Q psy8791 263 --FP-SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKS-EDK-----TERLPYAIMHVTPPMGPVPELAT-SRL 332 (706)
Q Consensus 263 --~~-~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~-~~~-----g~~i~~D~vI~a~G~~~~~~~~~-~~l 332 (706)
++ .+...+.+++.|+++||+++++++|++|+.++ +++.. .++ ++++++|++++++|++++..+.+ +++
T Consensus 202 ~~l~~~~~~~~~~~~~l~~~gI~~~~~~~v~~v~~~~--v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl 279 (437)
T 3sx6_A 202 LGIQGVGDSKGILTKGLKEEGIEAYTNCKVTKVEDNK--MYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGL 279 (437)
T ss_dssp TTTTCCTTHHHHHHHHHHHTTCEEECSEEEEEEETTE--EEEEEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTT
T ss_pred cccCcchHHHHHHHHHHHHCCCEEEcCCEEEEEECCe--EEEEecccCCccccceEEEEeEEEEcCCCcCchhhhccccc
Confidence 22 35688899999999999999999999998754 55543 122 67899999999999999877765 588
Q ss_pred CCCCCceeeCccccccCCCCCEEEccccCCCC----------CCchHHHHHHhHHHHHHHHHHHHcCCCCCC-cccceee
Q psy8791 333 VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLP----------TSKTAAAVAGQCKVVYDNLSAVMKNRALPH-EYNGYTS 401 (706)
Q Consensus 333 ~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~----------~~~~~~~a~~qg~~~a~ni~~~l~g~~~~~-~~~~~~~ 401 (706)
.+++|+|.||+ ++|.+++|||||+|||+..+ .|++++.|..||+++|+||.+.+.|+++.. .+.....
T Consensus 280 ~~~~G~i~Vd~-~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~~~~~~~~~~~~ 358 (437)
T 3sx6_A 280 CNPGGFVLVDE-HQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKGEQTMGTWNAV 358 (437)
T ss_dssp BCTTSCBCBCT-TSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTSCCCCCCCSCCEE
T ss_pred cCCCCcEEeCh-hccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCcceE
Confidence 88999999999 79977999999999999875 378999999999999999999999998744 6666789
Q ss_pred EEEEecCCeEEEEEEeCCCCcccCCCCCCCCchhHHHHHHHhhchHHHHHHhhcceecCCCcccccccc
Q psy8791 402 CPLVTGYSKCVMAEFDYTLKPLETFPVDQSKERSLMFQMKKQVMPFLYWNLMLRGYWNGPGVFRQMFHL 470 (706)
Q Consensus 402 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i 470 (706)
|++++|++.+++..+. ..+.........+++.||+|..+. +.|++.+..+..- |.+.+-+.+.
T Consensus 359 ~~~~~G~~~~~~~~~~----~~p~~~~~~~~~g~~~~~~K~~~~-~~f~~~~~~g~~~-p~~~~~~~~~ 421 (437)
T 3sx6_A 359 AFADMGDRGAAFIALP----QLKPRKVDVFAYGRWVHLAKVAFE-KYFIRKMKMGVSE-PFYEKVLFKM 421 (437)
T ss_dssp EEEECSSCEEEEEEES----SSSSCSEEEEEEEHHHHHHHHHHH-HHHHHHHHHCCCS-CCCCHHHHCC
T ss_pred EEEEeCCCceEEEeCC----CCCCcccccccccHHHHHHHHHHH-HHHHHHhccCCcc-ccHHHHHHHH
Confidence 9999999977654432 111111223457788999996554 5555545555544 4444444444
No 5
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=3.5e-41 Score=366.10 Aligned_cols=365 Identities=20% Similarity=0.324 Sum_probs=276.0
Q ss_pred CcEEEECCCHHHHHHHHHHHh-hcCCCeEEEEcCCCCcccCcccccccCccccCcccccccccccC-CCcEEEEceeEEE
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTS-KLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVSF 108 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~-~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~i~~~v~~i 108 (706)
++|||||||+||+++|.+|++ ...+++|+|||+++++.+.|.++....+....+++..++.+.+. .+++++.++|+.+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i 81 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVEKI 81 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEECEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEeeEEEE
Confidence 689999999999999999999 22389999999999999999888877777777777777776665 6899999999999
Q ss_pred EcCCCEEEeCCCe----EEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhh
Q psy8791 109 DPENNRVRTQAGS----EISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEA 184 (706)
Q Consensus 109 d~~~~~v~~~~g~----~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 184 (706)
+++.+.|.+.++. ++.||+||+|||+.+..+.+|| +.+
T Consensus 82 ~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ipG-------------------------------------~~~- 123 (409)
T 3h8l_A 82 DAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKG-------------------------------------WDK- 123 (409)
T ss_dssp ETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGGSBT-------------------------------------HHH-
T ss_pred eCCCCEEEEccCCcccceeeCCEEEECCCCCcCccCCCC-------------------------------------hhh-
Confidence 9999999988775 3999999999999998888999 322
Q ss_pred hcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecC------------------CCCeeeCChhHHHHHHHHHHHHHcC
Q psy8791 185 LDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFP------------------ATPIKCGGAPMKAVLIGDEYLRKHK 246 (706)
Q Consensus 185 ~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~------------------~~~v~~~g~~~~~~~~~~~~l~~~g 246 (706)
...+.++.+.+..+++.+..+.++.+|++.+ +.++.|.|.+.|.+....+++++.|
T Consensus 124 ------~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g 197 (409)
T 3h8l_A 124 ------YGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKG 197 (409)
T ss_dssp ------HCEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTT
T ss_pred ------cCcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcC
Confidence 1122345566677788888876666777766 3678899888899988888999999
Q ss_pred CCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 247 KRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 247 ~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
.+++.+++++++.+ +++ ++.+.+.+.+.++++||+++++++|++++.++ +++ ++|+++++|++|+++|++|+
T Consensus 198 ~~~~~~v~~~~~~~-~l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~--v~~---~~g~~~~~D~vi~a~G~~~~ 271 (409)
T 3h8l_A 198 MLDKVHVTVFSPGE-YLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREHE--IVD---EKGNTIPADITILLPPYTGN 271 (409)
T ss_dssp CTTTEEEEEECSSS-SSTTBCHHHHHHHHHHHHHHTCEEECSCCEEEECSSE--EEE---TTSCEEECSEEEEECCEECC
T ss_pred CCCCeEEEEEeCCc-cccccCHHHHHHHHHHHHHCCCEEEcCCceEEECCCe--EEE---CCCCEEeeeEEEECCCCCcc
Confidence 88888999999988 554 57889999999999999999999999998754 554 37889999999999999999
Q ss_pred hhhhcC--CCCCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCCCCCCcccceeeE
Q psy8791 325 PELATS--RLVDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNRALPHEYNGYTSC 402 (706)
Q Consensus 325 ~~~~~~--~l~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~~~~~~~~~~~~~ 402 (706)
+++.++ ++.+++|++.||+ ++|.+++|||||+|||+..+.|+++..|..||+++|+||.+.+.+......|.+...|
T Consensus 272 ~~l~~~~~~l~~~~G~i~vd~-~~~~~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l~~~~~~~~~~~~~~c 350 (409)
T 3h8l_A 272 PALKNSTPDLVDDGGFIPTDL-NMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRLGVPTKVDKYYPTIVC 350 (409)
T ss_dssp HHHHTSCGGGSCTTSCBCBBT-TSBBSSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCSC
T ss_pred HHHHhccccCcCCCCCEEeCc-ccccCCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHhcCCCCccccCCEEEE
Confidence 999888 6678899999999 8997799999999999998888999999999999999999999444434578888889
Q ss_pred EEEecCC-eEEE--EEEeCCCCcccCCCCCCCCchhHHHHHHHhhchHHHHHH
Q psy8791 403 PLVTGYS-KCVM--AEFDYTLKPLETFPVDQSKERSLMFQMKKQVMPFLYWNL 452 (706)
Q Consensus 403 ~~~~G~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~ 452 (706)
++..+.. .++. ..+.|.+.....+ ++...|++|..+.+.+||..
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~g~~~~~~------p~~~~~~~k~~~~~~~~w~k 397 (409)
T 3h8l_A 351 VADNPYEGYAVSVKDDTWYGGTVSIAD------PAAVNHLKKELFTKYYMWTK 397 (409)
T ss_dssp GGGSTTC----------------------------------------------
T ss_pred EEecCCCceEEEEecccccCCcccccC------CchHHHHHHHHHHHHHHhhc
Confidence 8776433 2332 2345554332232 45566777777777788873
No 6
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=4.5e-40 Score=359.41 Aligned_cols=364 Identities=19% Similarity=0.310 Sum_probs=286.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCcccccccccccC-CCcEEEEceeEEE
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVSF 108 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~i~~~v~~i 108 (706)
+++|||||||+||++||.+|++...+++|||||+++++.|.|.++....+....+++..++.+++. .+++++.++|+.+
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i 81 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESI 81 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEEEEEEE
Confidence 368999999999999999999943489999999999999999888877777777777777777765 7999999999999
Q ss_pred EcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCC
Q psy8791 109 DPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQP 188 (706)
Q Consensus 109 d~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 188 (706)
+++.+.|.++++.++.||+||+|||+.+..+ |.+ ...
T Consensus 82 d~~~~~v~~~~g~~i~~d~liiAtG~~~~~p---g~~-----------------------------------~~g----- 118 (430)
T 3h28_A 82 DPDANTVTTQSGKKIEYDYLVIATGPKLVFG---AEG-----------------------------------QEE----- 118 (430)
T ss_dssp ETTTTEEEETTCCEEECSEEEECCCCEEECC---SBT-----------------------------------HHH-----
T ss_pred ECCCCEEEECCCcEEECCEEEEcCCcccccC---CCC-----------------------------------CcC-----
Confidence 9999999999998899999999999987654 521 000
Q ss_pred CCCcccCCChhHHHHHHHHHHhc--cCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCC---
Q psy8791 189 DSGVSTNYSPQYVEKTLRNLQHF--QSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLF--- 263 (706)
Q Consensus 189 ~~~v~~~~~~~~~~~~~~~l~~~--~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~--- 263 (706)
.....++.+++...++.+..+ ..+.+|++.+.. ..|.|++.|.+....+.+++.|.+.+++|+++++.+.+.
T Consensus 119 --~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~-~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~ 195 (430)
T 3h28_A 119 --NSTSICTAEHALETQKKLQELYANPGPVVIGAIPG-VSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFG 195 (430)
T ss_dssp --HSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTT-CCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTT
T ss_pred --CccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCC-CCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccc
Confidence 011234455666666655554 344566665543 357777788888888889999877777899999988762
Q ss_pred -C-chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeC-CCceEEeecEEEECCCCCchhhhhc--CCCCCCCC-
Q psy8791 264 -P-SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSE-DKTERLPYAIMHVTPPMGPVPELAT--SRLVDQSG- 337 (706)
Q Consensus 264 -~-~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~-~~g~~i~~D~vI~a~G~~~~~~~~~--~~l~~~~G- 337 (706)
+ .+.+.+.+++.|+++||++++++.|++|+.++ +++... ++++++++|++++++|++|++++.+ +++.+++|
T Consensus 196 l~~~~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~~--v~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~~~~~gl~~~~G~ 273 (430)
T 3h28_A 196 VGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDK--VIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANK 273 (430)
T ss_dssp TTCSTTHHHHHHHHHHHTTCEEECSCEEEEECSSE--EEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTTBCTTTC
T ss_pred cCcchHHHHHHHHHHHHCCCEEEeCCEEEEEeCCe--EEEEecCCCceEEeeeEEEECCCCccchhHhhccccCcCCCCC
Confidence 2 35688899999999999999999999998754 555421 2378999999999999999988877 47888899
Q ss_pred ceeeCccccccCCCCCEEEccccCCCC----------CCchHHHHHHhHHHHHHHHHHHHcCCCCCCcccceeeEEEEec
Q psy8791 338 YVNVDKATLQHVKYSNVFAIGDCSNLP----------TSKTAAAVAGQCKVVYDNLSAVMKNRALPHEYNGYTSCPLVTG 407 (706)
Q Consensus 338 ~i~vd~~~l~~~~~~~Ifa~GD~~~~~----------~~~~~~~a~~qg~~~a~ni~~~l~g~~~~~~~~~~~~~~~~~G 407 (706)
+|.||+ ++|.+++|||||+|||+..+ .|++++.|..||+++|+||.+.+.|+++++.+.....|++++|
T Consensus 274 ~i~Vd~-~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~~~~~~~~~~~~~~~~~G 352 (430)
T 3h28_A 274 MVIVNR-CFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYAPRLSAICIADFG 352 (430)
T ss_dssp CBCCCT-TSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCCCEEECCCEEEEEECS
T ss_pred EEecCc-cccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCCCCcCCcceEEEEEeC
Confidence 999999 79977999999999999875 3789999999999999999999999988777778899999999
Q ss_pred CCeEEEEEEeCCCCcccCCCCCCCCchhHHHHHHHhhch
Q psy8791 408 YSKCVMAEFDYTLKPLETFPVDQSKERSLMFQMKKQVMP 446 (706)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 446 (706)
++.+++..... .+.........+++.||+|..+..
T Consensus 353 ~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~K~~~~~ 387 (430)
T 3h28_A 353 EDAGFFFADPV----IPPRERVITKMGKWAHYFKTAFEK 387 (430)
T ss_dssp SSEEEEEEESS----SSSCSEEEEEEEHHHHHHHHHHHH
T ss_pred CCceEEEeCCC----CCCccceeecccHHHHHHHHHHHH
Confidence 99877544321 011111223467788888865443
No 7
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=1.6e-32 Score=299.33 Aligned_cols=287 Identities=16% Similarity=0.170 Sum_probs=212.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-cccccccCccccCcc--ccccccccc-CCCcEEEE-cee
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-PMFTLIGGGMKKLSD--SRRPMKSVL-PSGATWVK-DKI 105 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-p~~~~~~~~~~~~~~--~~~~~~~~~-~~~v~~i~-~~v 105 (706)
+||||||||+||++||.+|++..++.+|+|||+++++.|. |.++...++...... +......+. +.++++.. .+|
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 80 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEV 80 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeE
Confidence 5899999999999999999998656889999999987775 556654444333222 212222232 35888866 589
Q ss_pred EEEEcCCCEEEeCC-----CeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccc
Q psy8791 106 VSFDPENNRVRTQA-----GSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSG 180 (706)
Q Consensus 106 ~~id~~~~~v~~~~-----g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (706)
+.||++.+.+.+.+ +.++.||+||||||++++.|++||. + .|.+
T Consensus 81 ~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~i~g~----~----------------~~~~----------- 129 (437)
T 4eqs_A 81 IAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFESD----I----------------TFTL----------- 129 (437)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCCCCCCT----T----------------EECC-----------
T ss_pred EEEEccCcEEEEEeccCCceEEEEcCEEEECCCCccccccccCc----e----------------EEee-----------
Confidence 99999999877643 2468999999999999988888871 1 1111
Q ss_pred hhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCC
Q psy8791 181 LQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMG 260 (706)
Q Consensus 181 l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~ 260 (706)
.+.+.+..+.+.+......+++ .++|+.. ++.....+.+.|. +|+++++.+
T Consensus 130 ---------------~~~~~~~~l~~~~~~~~~~~vv--------ViGgG~i--g~E~A~~l~~~g~----~Vtlv~~~~ 180 (437)
T 4eqs_A 130 ---------------RNLEDTDAIDQFIKANQVDKVL--------VVGAGYV--SLEVLENLYERGL----HPTLIHRSD 180 (437)
T ss_dssp ---------------SSHHHHHHHHHHHHHHTCCEEE--------EECCSHH--HHHHHHHHHHHTC----EEEEEESSS
T ss_pred ---------------ccHHHHHHHHHhhhccCCcEEE--------EECCccc--hhhhHHHHHhcCC----cceeeeeec
Confidence 2233333333333333222222 2344432 2233345666664 499999999
Q ss_pred cCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch-hhhhcCCC-CCCC
Q psy8791 261 VLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV-PELATSRL-VDQS 336 (706)
Q Consensus 261 ~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~-~~~~~~~l-~~~~ 336 (706)
++++ ++++.+.+++.++++||+++++++|++++.+. +++ ++|+++++|.|++|+|.+|| .++..+++ .+++
T Consensus 181 ~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~~--v~~---~~g~~~~~D~vl~a~G~~Pn~~~~~~~gl~~~~~ 255 (437)
T 4eqs_A 181 KINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE--ITF---KSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRK 255 (437)
T ss_dssp CCSTTSCGGGGHHHHHHHHHTTCCEEESCCEEEEETTE--EEE---TTSCEEECSEEEECCCEEESCGGGTTSSCCCCTT
T ss_pred cccccccchhHHHHHHHhhccceEEEeccEEEEecCCe--eee---cCCeEEeeeeEEEEeceecCcHHHHhhhhhhccC
Confidence 9887 78899999999999999999999999998653 554 47899999999999999999 56666788 7889
Q ss_pred CceeeCccccccCCCCCEEEccccCCCCC--------CchHHHHHHhHHHHHHHHH
Q psy8791 337 GYVNVDKATLQHVKYSNVFAIGDCSNLPT--------SKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 337 G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~--------~~~~~~a~~qg~~~a~ni~ 384 (706)
|+|.||+ ++| |+.|||||+|||+..+. +++++.|.+||+++|+||.
T Consensus 256 G~I~vd~-~~~-Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~ 309 (437)
T 4eqs_A 256 GFIPVND-KFE-TNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIA 309 (437)
T ss_dssp SCEECCT-TCB-CSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHH
T ss_pred CcEecCC-Ccc-CCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHc
Confidence 9999999 788 89999999999987643 3578899999999999994
No 8
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.6e-32 Score=293.78 Aligned_cols=277 Identities=17% Similarity=0.201 Sum_probs=214.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCccc-CcccccccCccccCccccccccccc-CCCcEEEEc-e
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYY-QPMFTLIGGGMKKLSDSRRPMKSVL-PSGATWVKD-K 104 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~i~~-~ 104 (706)
..+++|||||||+||++||..|++. +.+|+|||+++++.| .|.++....+....+++.....+++ +.+++++.+ +
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~--~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~ 84 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGK--CDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEF 84 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTT--CSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCC
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCC--CCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCE
Confidence 3567999999999999999999554 899999999998766 5777766656666566555544444 379999875 8
Q ss_pred eEEEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhh
Q psy8791 105 IVSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEA 184 (706)
Q Consensus 105 v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 184 (706)
|++||+++++|++++|+++.||+||+|||+.+..|++||.+
T Consensus 85 V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p~i~G~~--------------------------------------- 125 (385)
T 3klj_A 85 ATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVPHAD--------------------------------------- 125 (385)
T ss_dssp EEEEETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTCS---------------------------------------
T ss_pred EEEEECCCCEEEECCCCEEECCEEEEecCCCcCCCCCCCCC---------------------------------------
Confidence 99999999999999999999999999999999999999921
Q ss_pred hcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC
Q psy8791 185 LDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP 264 (706)
Q Consensus 185 ~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~ 264 (706)
.+.+..+.+.+..+.+.+.. +.+++ .++|+.. +......+.+.|. +|+++++.+.+++
T Consensus 126 ------~v~~~~~~~d~~~l~~~l~~--~~~vv--------VIGgG~~--g~E~A~~l~~~g~----~Vtvv~~~~~~l~ 183 (385)
T 3klj_A 126 ------EIFSLYSYDDALKIKDECKN--KGKAF--------IIGGGIL--GIELAQAIIDSGT----PASIGIILEYPLE 183 (385)
T ss_dssp ------CEECCSSHHHHHHHHHHHHH--HSCEE--------EECCSHH--HHHHHHHHHHHTC----CEEEECSSSSSCT
T ss_pred ------CeEEeCCHHHHHHHHHHhhc--CCeEE--------EECCCHH--HHHHHHHHHhCCC----eEEEEEcCCccch
Confidence 12223344455555444432 12222 2344432 2233344666664 3999999998875
Q ss_pred ---chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch-hhhhcCCCCCCCCcee
Q psy8791 265 ---SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV-PELATSRLVDQSGYVN 340 (706)
Q Consensus 265 ---~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~-~~~~~~~l~~~~G~i~ 340 (706)
++.+.+.+++.+++.||++++++.+.++ |+++++|+||+|+|++|+ +++..+++..++| +.
T Consensus 184 ~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i--------------g~~~~~D~vv~a~G~~p~~~~~~~~gl~~~~g-i~ 248 (385)
T 3klj_A 184 RQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM--------------GDLIRSSCVITAVGVKPNLDFIKDTEIASKRG-IL 248 (385)
T ss_dssp TTSCHHHHHHHHHHHHTTTCEEECSCCGGGC--------------HHHHHHSEEEECCCEEECCGGGTTSCCCBSSS-EE
T ss_pred hhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc--------------CeEEecCeEEECcCcccChhhhhhcCCCcCCC-EE
Confidence 6788999999999999999999888665 567999999999999999 5677778855566 99
Q ss_pred eCccccccCCCCCEEEccccCCCCC--CchHHHHHHhHHHHHHHHH
Q psy8791 341 VDKATLQHVKYSNVFAIGDCSNLPT--SKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 341 vd~~~l~~~~~~~Ifa~GD~~~~~~--~~~~~~a~~qg~~~a~ni~ 384 (706)
||+ +++ |+.|+|||+|||+..+. ++++..|..||+.+|+||.
T Consensus 249 vd~-~~~-t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~ 292 (385)
T 3klj_A 249 VND-HME-TSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNAC 292 (385)
T ss_dssp ECT-TCB-CSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHT
T ss_pred ECC-Ccc-cCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhc
Confidence 998 788 89999999999998653 5688999999999999995
No 9
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=2.1e-31 Score=289.45 Aligned_cols=295 Identities=19% Similarity=0.239 Sum_probs=219.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-cccc-cccCccccCcccccccccc-cCCCcEEEEc-e
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-PMFT-LIGGGMKKLSDSRRPMKSV-LPSGATWVKD-K 104 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-p~~~-~~~~~~~~~~~~~~~~~~~-~~~~v~~i~~-~ 104 (706)
.+++|||||||+||++||.+|+++....+|+|||+++++.|. |.+. .+..+....+.+.....++ ...+++++.+ +
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 87 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAE 87 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCE
Confidence 457999999999999999999998333349999999987665 3333 3333444444444333333 3478999986 9
Q ss_pred eEEEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhh
Q psy8791 105 IVSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEA 184 (706)
Q Consensus 105 v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 184 (706)
|+.+|++.+.|.+.+|.++.||+||+|||+.+..+++||.+ ..
T Consensus 88 v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~-----------------------------------~~-- 130 (415)
T 3lxd_A 88 VVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPRRLSCVGAD-----------------------------------LA-- 130 (415)
T ss_dssp EEEEETTTTEEEETTSCEEEEEEEEECCCEECCCCBTTSSC-----------------------------------CB--
T ss_pred EEEEECCCCEEEECCCCEEEeeEEEEccCCccCCCCCCCcc-----------------------------------cc--
Confidence 99999999999999999999999999999999988888831 00
Q ss_pred hcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC
Q psy8791 185 LDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP 264 (706)
Q Consensus 185 ~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~ 264 (706)
.+....+.+.+..+...+.. .++.++ .++|+.. +......+.+.|. +|+++++.+.+++
T Consensus 131 ------~v~~~~~~~d~~~l~~~~~~--~~~~vv-------ViGgG~~--g~e~A~~l~~~g~----~Vtvv~~~~~~l~ 189 (415)
T 3lxd_A 131 ------GVHAVRTKEDADRLMAELDA--GAKNAV-------VIGGGYI--GLEAAAVLTKFGV----NVTLLEALPRVLA 189 (415)
T ss_dssp ------TEECCCSHHHHHHHHHHHHT--TCCEEE-------EECCSHH--HHHHHHHHHHTTC----EEEEEESSSSTTT
T ss_pred ------CEEEEcCHHHHHHHHHHhhh--cCCeEE-------EECCCHH--HHHHHHHHHhcCC----eEEEEecCCchhh
Confidence 12222334444444443332 022222 2333322 2233345666663 5999999998875
Q ss_pred ---chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch-hhhhcCCCCCCCCcee
Q psy8791 265 ---SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV-PELATSRLVDQSGYVN 340 (706)
Q Consensus 265 ---~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~-~~~~~~~l~~~~G~i~ 340 (706)
++.+.+.+.+.++++||++++++.|++++.+++.+..+.+++|+++++|.||+|+|.+|+ +++..+++..++| |.
T Consensus 190 ~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~g-i~ 268 (415)
T 3lxd_A 190 RVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISAGASGGNG-VD 268 (415)
T ss_dssp TTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESCHHHHHTTCCCSSS-EE
T ss_pred hhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccChHHHHhCCCCcCCC-EE
Confidence 688999999999999999999999999987665565555668899999999999999999 4677788854566 99
Q ss_pred eCccccccCCCCCEEEccccCCCCCCc---------hHHHHHHhHHHHHHHHH
Q psy8791 341 VDKATLQHVKYSNVFAIGDCSNLPTSK---------TAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 341 vd~~~l~~~~~~~Ifa~GD~~~~~~~~---------~~~~a~~qg~~~a~ni~ 384 (706)
||+ +++ |+.|+|||+|||+..+.+. ++..|..||+.+|+||.
T Consensus 269 vd~-~~~-t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 319 (415)
T 3lxd_A 269 VDE-FCR-TSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDIC 319 (415)
T ss_dssp CCT-TCB-CSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHT
T ss_pred ECC-CCC-cCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhc
Confidence 999 687 7999999999999886643 47899999999999995
No 10
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.7e-31 Score=289.01 Aligned_cols=293 Identities=19% Similarity=0.232 Sum_probs=218.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-cccc-cccCccccCcccccccccc-cCCCcEEEEceeE
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-PMFT-LIGGGMKKLSDSRRPMKSV-LPSGATWVKDKIV 106 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-p~~~-~~~~~~~~~~~~~~~~~~~-~~~~v~~i~~~v~ 106 (706)
+++|||||||+||++||..|+++....+|+|||++++..|. |.+. .+..+....+.+.....+. ...+++++.++|+
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~v~ 80 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELISDRMV 80 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEECCCEE
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEEEEEE
Confidence 36899999999999999999998323389999999977665 3333 3333344444444433333 3478999889999
Q ss_pred EEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhc
Q psy8791 107 SFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALD 186 (706)
Q Consensus 107 ~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 186 (706)
.+|++.+.|.+.+|.++.||+||+|||+.+..+++||.+ .+
T Consensus 81 ~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~i~g~~-----------------~~---------------------- 121 (404)
T 3fg2_P 81 SIDREGRKLLLASGTAIEYGHLVLATGARNRMLDVPNAS-----------------LP---------------------- 121 (404)
T ss_dssp EEETTTTEEEESSSCEEECSEEEECCCEEECCCCSTTTT-----------------ST----------------------
T ss_pred EEECCCCEEEECCCCEEECCEEEEeeCCCccCCCCCCCC-----------------CC----------------------
Confidence 999999999999999999999999999999888888821 00
Q ss_pred CCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--
Q psy8791 187 QPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP-- 264 (706)
Q Consensus 187 ~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~-- 264 (706)
.+....+.+.+..+.+.+. .++.++ .++|+.. +......+.+.|. +|+++++.+.+++
T Consensus 122 ----~v~~~~~~~d~~~l~~~~~---~~~~vv-------ViGgG~~--g~e~A~~l~~~g~----~Vtvv~~~~~~~~~~ 181 (404)
T 3fg2_P 122 ----DVLYLRTLDESEVLRQRMP---DKKHVV-------VIGAGFI--GLEFAATARAKGL----EVDVVELAPRVMARV 181 (404)
T ss_dssp ----TEECCSSHHHHHHHHHHGG---GCSEEE-------EECCSHH--HHHHHHHHHHTTC----EEEEECSSSSTTTTT
T ss_pred ----cEEEECCHHHHHHHHHHhh---cCCeEE-------EECCCHH--HHHHHHHHHhCCC----EEEEEeCCCcchhhc
Confidence 2222223344444433322 122222 2333322 2223334555653 5999999988875
Q ss_pred -chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchh-hhhcCCCCCCCCceeeC
Q psy8791 265 -SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVP-ELATSRLVDQSGYVNVD 342 (706)
Q Consensus 265 -~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~-~~~~~~l~~~~G~i~vd 342 (706)
++.+.+.+.+.+++.||++++++.|++++.+++.+..+.+++|+++++|.||+|+|++|+. ++..+++..++| |.||
T Consensus 182 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~G-i~vd 260 (404)
T 3fg2_P 182 VTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAGLPTAAG-IIVD 260 (404)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBSSS-EEEC
T ss_pred cCHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhCCCCCCCC-EEEC
Confidence 6889999999999999999999999999876656655556689999999999999999994 677788844466 9999
Q ss_pred ccccccCCCCCEEEccccCCCCCCc--------hHHHHHHhHHHHHHHHH
Q psy8791 343 KATLQHVKYSNVFAIGDCSNLPTSK--------TAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 343 ~~~l~~~~~~~Ifa~GD~~~~~~~~--------~~~~a~~qg~~~a~ni~ 384 (706)
+ +++ |+.|+|||+|||+..+.+. ++..|..||+.+|+||.
T Consensus 261 ~-~~~-t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 308 (404)
T 3fg2_P 261 Q-QLL-TSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLT 308 (404)
T ss_dssp T-TSB-CSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTT
T ss_pred C-Ccc-cCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhC
Confidence 9 688 8999999999999876432 47899999999999994
No 11
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.5e-31 Score=285.00 Aligned_cols=281 Identities=19% Similarity=0.252 Sum_probs=209.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-cccccccCccccCcccccccccccC-CCcEEEEc-eeE
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-PMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKD-KIV 106 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~i~~-~v~ 106 (706)
..+|||||||+||++||..|++. + +|+|||+++...|. |+++....+..+.+.+.....+++. .+++++.+ +|+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~--g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~ 84 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQT--Y-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAK 84 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTT--S-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEE
T ss_pred CCcEEEECCcHHHHHHHHHHhhc--C-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEE
Confidence 35899999999999999999988 7 99999999875543 6665544444555555444444333 68999886 699
Q ss_pred EEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhc
Q psy8791 107 SFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALD 186 (706)
Q Consensus 107 ~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 186 (706)
.+|++++.|. .+|.++.||+||+|||+.+..|++||.+
T Consensus 85 ~id~~~~~V~-~~g~~~~~d~lViATGs~p~~p~i~G~~----------------------------------------- 122 (367)
T 1xhc_A 85 LIDRGRKVVI-TEKGEVPYDTLVLATGARAREPQIKGKE----------------------------------------- 122 (367)
T ss_dssp EEETTTTEEE-ESSCEEECSEEEECCCEEECCCCSBTGG-----------------------------------------
T ss_pred EEECCCCEEE-ECCcEEECCEEEECCCCCCCCCCCCCcC-----------------------------------------
Confidence 9999988888 7778899999999999999888888811
Q ss_pred CCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC-c
Q psy8791 187 QPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP-S 265 (706)
Q Consensus 187 ~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~-~ 265 (706)
.+.+..+.+.+..+.+.+.. +.++++ ++|++. +......+++.|. +|+++++.+.+++ +
T Consensus 123 ----~v~~~~~~~~~~~l~~~~~~--~~~vvV--------iGgG~~--g~E~A~~l~~~g~----~Vtlv~~~~~~l~~~ 182 (367)
T 1xhc_A 123 ----YLLTLRTIFDADRIKESIEN--SGEAII--------IGGGFI--GLELAGNLAEAGY----HVKLIHRGAMFLGLD 182 (367)
T ss_dssp ----GEECCCSHHHHHHHHHHHHH--HSEEEE--------EECSHH--HHHHHHHHHHTTC----EEEEECSSSCCTTCC
T ss_pred ----CEEEEcCHHHHHHHHHHhhc--CCcEEE--------ECCCHH--HHHHHHHHHhCCC----EEEEEeCCCeeccCC
Confidence 12222334444444433321 122222 333322 2233344666664 5999999988876 6
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchh-hhhcCCCCCCCCceeeCcc
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVP-ELATSRLVDQSGYVNVDKA 344 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~-~~~~~~l~~~~G~i~vd~~ 344 (706)
+++.+.+++.|++.||+++++++|.+++.+ .+.+ ++|+ +++|.||+|+|.+|+. ++.+.++..++| +.||+
T Consensus 183 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~--~v~~---~~g~-i~~D~vi~a~G~~p~~~ll~~~gl~~~~g-i~Vd~- 254 (367)
T 1xhc_A 183 EELSNMIKDMLEETGVKFFLNSELLEANEE--GVLT---NSGF-IEGKVKICAIGIVPNVDLARRSGIHTGRG-ILIDD- 254 (367)
T ss_dssp HHHHHHHHHHHHHTTEEEECSCCEEEECSS--EEEE---TTEE-EECSCEEEECCEEECCHHHHHTTCCBSSS-EECCT-
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEee--EEEE---CCCE-EEcCEEEECcCCCcCHHHHHhCCCCCCCC-EEECC-
Confidence 788999999999999999999999999843 3544 3677 9999999999999994 667788844456 99999
Q ss_pred ccccCCCCCEEEccccCCCCC--CchHHHHHHhHHHHHHHHH
Q psy8791 345 TLQHVKYSNVFAIGDCSNLPT--SKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 345 ~l~~~~~~~Ifa~GD~~~~~~--~~~~~~a~~qg~~~a~ni~ 384 (706)
++| |+.|||||+|||+..+. ++++..|..||+.+|+||.
T Consensus 255 ~~~-t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~ 295 (367)
T 1xhc_A 255 NFR-TSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILK 295 (367)
T ss_dssp TSB-CSSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHT
T ss_pred Ccc-cCCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhc
Confidence 788 79999999999986532 4688999999999999995
No 12
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=2.1e-31 Score=288.76 Aligned_cols=292 Identities=17% Similarity=0.191 Sum_probs=215.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-cccc-cccCccccCcccccccccccCCCcEEEEc-eeE
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-PMFT-LIGGGMKKLSDSRRPMKSVLPSGATWVKD-KIV 106 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-p~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~i~~-~v~ 106 (706)
+++|||||||+||++||..|+++....+|+|||+++++.|. |.+. .+..+....+.+..+...+...+++++.+ +|+
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 81 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVT 81 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEE
T ss_pred CCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEE
Confidence 35899999999999999999999333459999999987775 4443 24444444555522223333479999997 999
Q ss_pred EEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhc
Q psy8791 107 SFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALD 186 (706)
Q Consensus 107 ~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 186 (706)
.+|++.+.|.+.+|+++.||+||+|||+.+..+++||.+ .
T Consensus 82 ~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~ipG~~-----------------------------------~----- 121 (410)
T 3ef6_A 82 ALDVQTRTISLDDGTTLSADAIVIATGSRARTMALPGSQ-----------------------------------L----- 121 (410)
T ss_dssp EEETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTTT-----------------------------------S-----
T ss_pred EEECCCCEEEECCCCEEECCEEEEccCCcccCCCCCCcc-----------------------------------c-----
Confidence 999999999999999999999999999999988899821 0
Q ss_pred CCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--
Q psy8791 187 QPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP-- 264 (706)
Q Consensus 187 ~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~-- 264 (706)
. .+....+.+.+..+.+. +..++.++ .++|+.. +......+.+.|. +|+++++.+.+++
T Consensus 122 -~--~v~~~~~~~d~~~l~~~---~~~~~~vv-------ViGgG~~--g~E~A~~l~~~g~----~Vtvv~~~~~~l~~~ 182 (410)
T 3ef6_A 122 -P--GVVTLRTYGDVQVLRDS---WTSATRLL-------IVGGGLI--GCEVATTARKLGL----SVTILEAGDELLVRV 182 (410)
T ss_dssp -T--TEECCCSHHHHHHHHHH---CCTTCEEE-------EECCSHH--HHHHHHHHHHTTC----EEEEECSSSSSSHHH
T ss_pred -c--ceEEeccHHHHHHHHHH---hccCCeEE-------EECCCHH--HHHHHHHHHhCCC----eEEEEecCCccchhh
Confidence 0 22233344444444332 22232222 2334422 2223334566663 5999999998875
Q ss_pred -chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch-hhhhcCCCCCCCCceeeC
Q psy8791 265 -SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV-PELATSRLVDQSGYVNVD 342 (706)
Q Consensus 265 -~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~-~~~~~~~l~~~~G~i~vd 342 (706)
++.+.+.+.+.+++.||++++++.|++++.+++ +..+.+++|+++++|.||+|+|.+|+ +++..+++..++| +.||
T Consensus 183 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~g-i~vd 260 (410)
T 3ef6_A 183 LGRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQ-LEQVMASDGRSFVADSALICVGAEPADQLARQAGLACDRG-VIVD 260 (410)
T ss_dssp HCHHHHHHHHHHHHHHTCEEECSCCEEEEECSSS-CCEEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBSSS-EECC
T ss_pred cCHHHHHHHHHHHHHCCCEEEeCCEEEEEeccCc-EEEEEECCCCEEEcCEEEEeeCCeecHHHHHhCCCccCCe-EEEc
Confidence 688899999999999999999999999987653 22233457899999999999999999 5777788844455 9999
Q ss_pred ccccccCCCCCEEEccccCCCCCC-------chHHHHHHhHHHHHHHHH
Q psy8791 343 KATLQHVKYSNVFAIGDCSNLPTS-------KTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 343 ~~~l~~~~~~~Ifa~GD~~~~~~~-------~~~~~a~~qg~~~a~ni~ 384 (706)
+ +++ |+.|+|||+|||+..+.+ .++..|..||+.+|+||.
T Consensus 261 ~-~~~-t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 307 (410)
T 3ef6_A 261 H-CGA-TLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAIL 307 (410)
T ss_dssp T-TSB-CSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHT
T ss_pred c-Cee-ECCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHc
Confidence 9 677 899999999999987542 357899999999999994
No 13
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.97 E-value=1.3e-30 Score=288.17 Aligned_cols=295 Identities=18% Similarity=0.219 Sum_probs=198.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCc-ccccccCcccc-Cccc-------ccccccccC-CCcE
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQP-MFTLIGGGMKK-LSDS-------RRPMKSVLP-SGAT 99 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p-~~~~~~~~~~~-~~~~-------~~~~~~~~~-~~v~ 99 (706)
+++|+|||||+|||+||.+|+++.++++|+|||+++.+.|.+ .++...++... .+.+ ......+.. .+++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 469999999999999999999987789999999999877764 35544433332 2222 222333443 5788
Q ss_pred EEE-ceeEEEEcCCCEEEeCC---Ce--EEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccc
Q psy8791 100 WVK-DKIVSFDPENNRVRTQA---GS--EISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLD 173 (706)
Q Consensus 100 ~i~-~~v~~id~~~~~v~~~~---g~--~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (706)
+.. .+|+++|++.+.+.+.+ |. ++.||+||+|||+.+..|++||.+
T Consensus 83 ~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~---------------------------- 134 (472)
T 3iwa_A 83 ALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMD---------------------------- 134 (472)
T ss_dssp EECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCSCTTTT----------------------------
T ss_pred EEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCCCCCCCC----------------------------
Confidence 754 79999999999888765 55 789999999999999988899831
Q ss_pred cccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHc-CCCCCcE
Q psy8791 174 FLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKH-KKRDAAK 252 (706)
Q Consensus 174 ~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~-g~~~~~~ 252 (706)
. . .+....+...+..+.+.+......+++ .++|+.. +......+.+. |. +
T Consensus 135 -------~------~--~v~~~~~~~~~~~l~~~l~~~~~~~vv--------ViGgG~~--g~e~A~~l~~~~g~----~ 185 (472)
T 3iwa_A 135 -------L------A--GVTPVTNLDEAEFVQHAISAGEVSKAV--------IVGGGFI--GLEMAVSLADMWGI----D 185 (472)
T ss_dssp -------S------B--TEEECCSHHHHHHHHHHCCTTSCSEEE--------EECCSHH--HHHHHHHHHHHHCC----E
T ss_pred -------C------C--CEEEeCCHHHHHHHHHHhhcCCCCEEE--------EECCCHH--HHHHHHHHHHhcCC----c
Confidence 0 0 122223334444333333222222222 2334422 12222344555 54 5
Q ss_pred EEEEeCCCcCCC---chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch-hhhh
Q psy8791 253 LTYCTGMGVLFP---SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV-PELA 328 (706)
Q Consensus 253 v~l~~~~~~~~~---~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~-~~~~ 328 (706)
|+++++.+.+++ ++.+.+.+.+.+++.||+++++++|++++.+++.+.+. +++|+++++|.||+|+|.+|+ .++.
T Consensus 186 Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~-~~~g~~i~aD~Vv~a~G~~p~~~l~~ 264 (472)
T 3iwa_A 186 TTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARV-ITDKRTLDADLVILAAGVSPNTQLAR 264 (472)
T ss_dssp EEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEE-EESSCEEECSEEEECSCEEECCHHHH
T ss_pred EEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEE-EeCCCEEEcCEEEECCCCCcCHHHHH
Confidence 999999988776 68899999999999999999999999998755555432 347889999999999999999 4555
Q ss_pred cCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCC--------CchHHHHHHhHHHHHHHHH
Q psy8791 329 TSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPT--------SKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 329 ~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~--------~~~~~~a~~qg~~~a~ni~ 384 (706)
+.|+ .+++|+|.||+ +++ |+.|||||+|||+..+. ++++..|..||+++|+||.
T Consensus 265 ~~gl~~~~~g~i~vd~-~~~-t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 327 (472)
T 3iwa_A 265 DAGLELDPRGAIIVDT-RMR-TSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLA 327 (472)
T ss_dssp HHTCCBCTTCCEECCT-TCB-CSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHT
T ss_pred hCCccCCCCCCEEECC-Ccc-cCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhc
Confidence 6788 67899999999 688 89999999999995422 3477899999999999995
No 14
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.97 E-value=3.5e-30 Score=282.73 Aligned_cols=293 Identities=17% Similarity=0.228 Sum_probs=207.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCc-ccccccCccccCccccc-cccccc-CCCcEEEEc-ee
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQP-MFTLIGGGMKKLSDSRR-PMKSVL-PSGATWVKD-KI 105 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p-~~~~~~~~~~~~~~~~~-~~~~~~-~~~v~~i~~-~v 105 (706)
+++|||||||+||++||..|++..++++|+|||+++++.+.| .++....+....+.+.. +...+. ..+++++.+ +|
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 479999999999999999999987789999999999877765 35544444433443332 334442 478999886 99
Q ss_pred EEEEcCCCEEEeCCC-eEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhh
Q psy8791 106 VSFDPENNRVRTQAG-SEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEA 184 (706)
Q Consensus 106 ~~id~~~~~v~~~~g-~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 184 (706)
+.++++.+.+.+.++ .++.||+||+|||+.+..|++||.+ .
T Consensus 83 ~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~~p~i~G~~-----------------------------------~--- 124 (449)
T 3kd9_A 83 IEVDTGYVRVRENGGEKSYEWDYLVFANGASPQVPAIEGVN-----------------------------------L--- 124 (449)
T ss_dssp EEECSSEEEEECSSSEEEEECSEEEECCCEEECCCSCBTTT-----------------------------------S---
T ss_pred EEEecCCCEEEECCceEEEEcCEEEECCCCCCCCCCCCCCC-----------------------------------C---
Confidence 999998888888877 4899999999999999888888832 0
Q ss_pred hcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC
Q psy8791 185 LDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP 264 (706)
Q Consensus 185 ~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~ 264 (706)
. .+....+.+.+....+.+..+.+.++++ ++|+.. +......+.+.|. +|+++++.+++++
T Consensus 125 ---~--~v~~~~~~~~~~~~~~~~~~~~~~~vvV--------iGgG~~--g~E~A~~l~~~g~----~Vtlv~~~~~~l~ 185 (449)
T 3kd9_A 125 ---K--GVFTADLPPDALAIREYMEKYKVENVVI--------IGGGYI--GIEMAEAFAAQGK----NVTMIVRGERVLR 185 (449)
T ss_dssp ---T--TEECSCSTHHHHHHHHHHSSSCCCEEEE--------ECCSHH--HHHHHHHHHHTTC----EEEEEESSSSTTT
T ss_pred ---C--CEEEeCCHHHHHHHHHHHHhcCCCeEEE--------ECCCHH--HHHHHHHHHhCCC----eEEEEEcCCccch
Confidence 0 1222233344444444443333333322 334422 2223345666663 5999999988875
Q ss_pred ---chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch-hhhhcCCC-CCCCCce
Q psy8791 265 ---SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV-PELATSRL-VDQSGYV 339 (706)
Q Consensus 265 ---~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~-~~~~~~~l-~~~~G~i 339 (706)
++.+.+.+++.+++. |++++++.+.+++.+++ +..+. .+++++++|.||+|+|.+|+ +++...|+ .+++|+|
T Consensus 186 ~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~~-v~~v~-~~g~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~~G~i 262 (449)
T 3kd9_A 186 RSFDKEVTDILEEKLKKH-VNLRLQEITMKIEGEER-VEKVV-TDAGEYKAELVILATGIKPNIELAKQLGVRIGETGAI 262 (449)
T ss_dssp TTSCHHHHHHHHHHHTTT-SEEEESCCEEEEECSSS-CCEEE-ETTEEEECSEEEECSCEEECCHHHHHTTCCBCTTSSB
T ss_pred hhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccCc-EEEEE-eCCCEEECCEEEEeeCCccCHHHHHhCCccCCCCCCE
Confidence 678899999999999 99999999999987653 22222 26789999999999999999 56666788 7888999
Q ss_pred eeCccccccCCCCCEEEccccCCCC--------CCchHHHHHHhHHHHHHHHH
Q psy8791 340 NVDKATLQHVKYSNVFAIGDCSNLP--------TSKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 340 ~vd~~~l~~~~~~~Ifa~GD~~~~~--------~~~~~~~a~~qg~~~a~ni~ 384 (706)
.||+ +++ |+.|||||+|||+..+ .++++..|..||+++|+||.
T Consensus 263 ~vd~-~~~-t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~ 313 (449)
T 3kd9_A 263 WTNE-KMQ-TSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIA 313 (449)
T ss_dssp CCCT-TCB-CSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHT
T ss_pred EECC-CCc-cCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhc
Confidence 9999 688 8999999999998642 14688999999999999994
No 15
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.97 E-value=8.5e-30 Score=288.37 Aligned_cols=295 Identities=19% Similarity=0.203 Sum_probs=216.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCc-ccccccCcccc-Ccc-cccccccccC-CCcEEE-Ece
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQP-MFTLIGGGMKK-LSD-SRRPMKSVLP-SGATWV-KDK 104 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p-~~~~~~~~~~~-~~~-~~~~~~~~~~-~~v~~i-~~~ 104 (706)
+++|+|||||+|||+||.+|+++.++++|+|||+++++.|.+ .++....+... ... +......+.. .++++. ..+
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHE 80 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCE
Confidence 368999999999999999999987789999999999877764 34544333322 222 2233344443 588885 489
Q ss_pred eEEEEcCCCEEEeCC---Ce--EEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCcc
Q psy8791 105 IVSFDPENNRVRTQA---GS--EISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPS 179 (706)
Q Consensus 105 v~~id~~~~~v~~~~---g~--~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (706)
|+++|++.+.+.+.+ |. ++.||+||+|||+.+..|++||.+
T Consensus 81 V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ipG~~---------------------------------- 126 (565)
T 3ntd_A 81 VVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPPIPGVD---------------------------------- 126 (565)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTCC----------------------------------
T ss_pred EEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCCCCCCCC----------------------------------
Confidence 999999999887753 43 789999999999999999999932
Q ss_pred chhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCC
Q psy8791 180 GLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGM 259 (706)
Q Consensus 180 ~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~ 259 (706)
. . .+....+...+..+.+.+......++++ ++|+.. +......+.+.|. +|+++++.
T Consensus 127 -~------~--~v~~~~~~~~~~~l~~~~~~~~~~~vvV--------iGgG~~--g~e~A~~l~~~g~----~Vtlv~~~ 183 (565)
T 3ntd_A 127 -N------P--LTHSLRNIPDMDRILQTIQMNNVEHATV--------VGGGFI--GLEMMESLHHLGI----KTTLLELA 183 (565)
T ss_dssp -S------T--TEECCSSHHHHHHHHHHHHHTTCSEEEE--------ECCSHH--HHHHHHHHHHTTC----EEEEEESS
T ss_pred -C------C--CEEEeCCHHHHHHHHHHHhhCCCCEEEE--------ECCCHH--HHHHHHHHHhcCC----cEEEEEcC
Confidence 0 0 1222233334444444444443333322 344422 2223334566664 59999999
Q ss_pred CcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeC-------------------CCCEEEEEeCCCceEEeecEEEEC
Q psy8791 260 GVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDL-------------------ANKEAVFKSEDKTERLPYAIMHVT 318 (706)
Q Consensus 260 ~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~-------------------~~~~v~~~~~~~g~~i~~D~vI~a 318 (706)
+.+++ ++.+.+.+.+.+++.||++++++.+.+++. +++.+.... ++|+++++|.||+|
T Consensus 184 ~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~g~~i~~D~vi~a 262 (565)
T 3ntd_A 184 DQVMTPVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTL-SNGELLETDLLIMA 262 (565)
T ss_dssp SSSCTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEE-TTSCEEEESEEEEC
T ss_pred CccchhcCHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEE-cCCCEEEcCEEEEC
Confidence 98876 688899999999999999999999999986 344454433 57889999999999
Q ss_pred CCCCch-hhhhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCC--------CCchHHHHHHhHHHHHHHHH
Q psy8791 319 PPMGPV-PELATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLP--------TSKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 319 ~G~~~~-~~~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~--------~~~~~~~a~~qg~~~a~ni~ 384 (706)
+|.+|+ .++...|+ .+++|+|.||+ +++ |+.|||||+|||+..+ .++++..|..||+++|+||.
T Consensus 263 ~G~~p~~~l~~~~g~~~~~~g~i~vd~-~~~-t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 336 (565)
T 3ntd_A 263 IGVRPETQLARDAGLAIGELGGIKVNA-MMQ-TSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMF 336 (565)
T ss_dssp SCEEECCHHHHHHTCCBCTTSSBCCCT-TCB-CSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHT
T ss_pred cCCccchHHHHhCCcccCCCCCEEECC-Ccc-cCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhc
Confidence 999999 55566688 68889999999 788 8999999999998532 23578899999999999995
No 16
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.97 E-value=4.6e-30 Score=277.85 Aligned_cols=285 Identities=17% Similarity=0.214 Sum_probs=207.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-cccc-cccCccccCcccccccccccCCCcEEEEce-e
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-PMFT-LIGGGMKKLSDSRRPMKSVLPSGATWVKDK-I 105 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-p~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~-v 105 (706)
..++|+|||||+||++||.+|++.....+|+|||+++...|. |.++ .+..+.. .+.... ..+...+++++.++ |
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~v~~~~~~~v 82 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGD-AEKIRL--DCKRAPEVEWLLGVTA 82 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCC-GGGSBC--CCTTSCSCEEEETCCE
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCc-hhhhhH--HHHHHCCCEEEcCCEE
Confidence 357999999999999999999998333369999999876554 3332 1222212 222221 23345789999875 9
Q ss_pred EEEEcCCCEEEeCCCeEEEecEEEEccccccccCCC-CCCcccccccccccccccccccCccCCccccccccCccchhhh
Q psy8791 106 VSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRV-KGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEA 184 (706)
Q Consensus 106 ~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 184 (706)
+.+|++.++|.+.+|.++.||+||+|||+.+..|++ ||.+ +
T Consensus 83 ~~i~~~~~~v~~~~g~~~~~d~lviAtG~~~~~~~i~~G~~--~------------------------------------ 124 (408)
T 2gqw_A 83 QSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGAT--M------------------------------------ 124 (408)
T ss_dssp EEEETTTTEEEETTSCEEECSEEEECCCEEECCCGGGTTCS--S------------------------------------
T ss_pred EEEECCCCEEEECCCCEEECCEEEECCCCCCCCCCccCCCC--C------------------------------------
Confidence 999999999999988899999999999999988888 8821 0
Q ss_pred hcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC
Q psy8791 185 LDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP 264 (706)
Q Consensus 185 ~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~ 264 (706)
.+....+.+.+..+.+ .+..++.++ .++|+.. ++.....+.+.|. +|+++++.+.+++
T Consensus 125 ------~v~~~~~~~~~~~l~~---~~~~~~~vv-------ViGgG~~--g~E~A~~l~~~g~----~Vtlv~~~~~~l~ 182 (408)
T 2gqw_A 125 ------PVHTLRTLEDARRIQA---GLRPQSRLL-------IVGGGVI--GLELAATARTAGV----HVSLVETQPRLMS 182 (408)
T ss_dssp ------CEEECCSHHHHHHHHT---TCCTTCEEE-------EECCSHH--HHHHHHHHHHTTC----EEEEEESSSSSST
T ss_pred ------cEEEECCHHHHHHHHH---HhhcCCeEE-------EECCCHH--HHHHHHHHHhCCC----EEEEEEeCCcccc
Confidence 2222233333333222 122222222 2344422 2233345666664 5999999988875
Q ss_pred ---chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch-hhhhcCCCCCCCCcee
Q psy8791 265 ---SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV-PELATSRLVDQSGYVN 340 (706)
Q Consensus 265 ---~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~-~~~~~~~l~~~~G~i~ 340 (706)
++.+.+.+.+.+++.||+++++++|.+++ ++ .+++ ++|+++++|.||+|+|.+|+ +++.+.++..++| |.
T Consensus 183 ~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~~-~v~~---~~g~~i~~D~vi~a~G~~p~~~l~~~~gl~~~~g-i~ 256 (408)
T 2gqw_A 183 RAAPATLADFVARYHAAQGVDLRFERSVTGSV-DG-VVLL---DDGTRIAADMVVVGIGVLANDALARAAGLACDDG-IF 256 (408)
T ss_dssp TTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE-TT-EEEE---TTSCEEECSEEEECSCEEECCHHHHHHTCCBSSS-EE
T ss_pred cccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-CC-EEEE---CCCCEEEcCEEEECcCCCccHHHHHhCCCCCCCC-EE
Confidence 57889999999999999999999999998 43 4444 47889999999999999999 5677778844466 99
Q ss_pred eCccccccCCCCCEEEccccCCCCCC--------chHHHHHHhHHHHHHHHH
Q psy8791 341 VDKATLQHVKYSNVFAIGDCSNLPTS--------KTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 341 vd~~~l~~~~~~~Ifa~GD~~~~~~~--------~~~~~a~~qg~~~a~ni~ 384 (706)
||+ ++| |+.|+|||+|||+..+.+ ..+..|..||+.+|+||.
T Consensus 257 Vd~-~~~-t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 306 (408)
T 2gqw_A 257 VDA-YGR-TTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLV 306 (408)
T ss_dssp CCT-TCB-CSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHH
T ss_pred ECC-CCc-cCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhc
Confidence 999 688 799999999999987532 267899999999999996
No 17
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.97 E-value=9.1e-30 Score=289.04 Aligned_cols=298 Identities=15% Similarity=0.191 Sum_probs=220.1
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCc-ccccccCccccC-cc-ccccccccc-CCCcEEE
Q psy8791 26 SSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQP-MFTLIGGGMKKL-SD-SRRPMKSVL-PSGATWV 101 (706)
Q Consensus 26 ~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p-~~~~~~~~~~~~-~~-~~~~~~~~~-~~~v~~i 101 (706)
+...+++|||||||+|||+||.+|++..++++|+|||+++.+.|.+ .++...++.... +. +..++..+. ..++++.
T Consensus 32 ~~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~ 111 (588)
T 3ics_A 32 DRWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIR 111 (588)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEE
T ss_pred CcccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEE
Confidence 3445689999999999999999999987789999999999877764 455544443322 22 333444444 3688885
Q ss_pred E-ceeEEEEcCCCEEEeC---CCe--EEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccc
Q psy8791 102 K-DKIVSFDPENNRVRTQ---AGS--EISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFL 175 (706)
Q Consensus 102 ~-~~v~~id~~~~~v~~~---~g~--~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (706)
. .+|++++++.+.+.+. +|. ++.||+||+|||+.+..|++||.+
T Consensus 112 ~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~------------------------------ 161 (588)
T 3ics_A 112 VLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPSIPGIE------------------------------ 161 (588)
T ss_dssp CSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTT------------------------------
T ss_pred ECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCCCCCCcc------------------------------
Confidence 4 8999999999988774 455 789999999999999988899831
Q ss_pred cCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEE
Q psy8791 176 RRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTY 255 (706)
Q Consensus 176 ~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l 255 (706)
+ .. .+....+...+..+...+......++++ ++|+.. +......+.+.|. +|++
T Consensus 162 -------~---~~--~v~~~~~~~~~~~~~~~l~~~~~~~vvV--------iGgG~~--g~e~A~~l~~~g~----~Vtl 215 (588)
T 3ics_A 162 -------E---AK--ALFTLRNVPDTDRIKAYIDEKKPRHATV--------IGGGFI--GVEMVENLRERGI----EVTL 215 (588)
T ss_dssp -------T---CT--TEEECSSHHHHHHHHHHHHHHCCSEEEE--------ECCSHH--HHHHHHHHHHTTC----EEEE
T ss_pred -------c---CC--CeEEeCCHHHHHHHHHHHhhcCCCeEEE--------ECCCHH--HHHHHHHHHhCCC----eEEE
Confidence 0 00 1222233334444444444333333322 334422 2233344666664 5999
Q ss_pred EeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch-hhhhcCCC
Q psy8791 256 CTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV-PELATSRL 332 (706)
Q Consensus 256 ~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~-~~~~~~~l 332 (706)
+++.+.+++ ++.+.+.+.+.|++.||+++++++|++++.+++.+.+ ++|+++++|.||+|+|++|+ +++...|+
T Consensus 216 v~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~---~~g~~i~~D~Vi~a~G~~p~~~~l~~~g~ 292 (588)
T 3ics_A 216 VEMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENGAVVRL---KSGSVIQTDMLILAIGVQPESSLAKGAGL 292 (588)
T ss_dssp ECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTEEEE---TTSCEEECSEEEECSCEEECCHHHHHTTC
T ss_pred EecCCcccccCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCCCEEEE---CCCCEEEcCEEEEccCCCCChHHHHhcCc
Confidence 999988886 6889999999999999999999999999876555554 37889999999999999999 46667888
Q ss_pred -CCCCCceeeCccccccCCCCCEEEccccCCCC--------CCchHHHHHHhHHHHHHHHH
Q psy8791 333 -VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLP--------TSKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 333 -~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~--------~~~~~~~a~~qg~~~a~ni~ 384 (706)
.+++|+|.||+ +++ |+.|+|||+|||+..+ .++++..|..||+++|+||.
T Consensus 293 ~~~~~g~i~vd~-~~~-t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 351 (588)
T 3ics_A 293 ALGVRGTIKVNE-KFQ-TSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIH 351 (588)
T ss_dssp CBCGGGCBCCCT-TSB-CSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHT
T ss_pred eEcCCCCEEECC-ccc-cCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhc
Confidence 77899999999 688 8999999999999532 24688899999999999994
No 18
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.97 E-value=1.7e-29 Score=275.34 Aligned_cols=296 Identities=14% Similarity=0.185 Sum_probs=209.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-cccc-cccCccccCccccccccc-ccCCCcEEEE-cee
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-PMFT-LIGGGMKKLSDSRRPMKS-VLPSGATWVK-DKI 105 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-p~~~-~~~~~~~~~~~~~~~~~~-~~~~~v~~i~-~~v 105 (706)
.++|||||||+||++||..|++.....+|+|||+++...|. |.+. .+..+....+.+.....+ +...+++++. .+|
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 57999999999999999999998322389999999875553 2222 122222223333222222 2346899887 478
Q ss_pred EEEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhh
Q psy8791 106 VSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEAL 185 (706)
Q Consensus 106 ~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 185 (706)
+.++++.+.|.+.+|+++.||+||+|||+.+..+++||.+ ...
T Consensus 84 ~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~~~~i~G~~-----------------------------------~~~-- 126 (431)
T 1q1r_A 84 TAINRDRQQVILSDGRALDYDRLVLATGGRPRPLPVASGA-----------------------------------VGK-- 126 (431)
T ss_dssp EEEETTTTEEEETTSCEEECSEEEECCCEEECCCGGGTTH-----------------------------------HHH--
T ss_pred EEEECCCCEEEECCCCEEECCEEEEcCCCCccCCCCCCcc-----------------------------------cCC--
Confidence 9999998999999888999999999999999888888821 000
Q ss_pred cCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC-
Q psy8791 186 DQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP- 264 (706)
Q Consensus 186 ~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~- 264 (706)
.. .+....+.+.+..+.+. +..++.++ .++|+.. ++.....+.+.|. +|+++++.+.+++
T Consensus 127 -~~--~v~~~~~~~d~~~l~~~---l~~~~~vv-------ViGgG~~--g~E~A~~l~~~G~----~Vtlv~~~~~~l~~ 187 (431)
T 1q1r_A 127 -AN--NFRYLRTLEDAECIRRQ---LIADNRLV-------VIGGGYI--GLEVAATAIKANM----HVTLLDTAARVLER 187 (431)
T ss_dssp -ST--TEEESSSHHHHHHHHHT---CCTTCEEE-------EECCSHH--HHHHHHHHHHTTC----EEEEECSSSSTTTT
T ss_pred -Cc--eEEEECCHHHHHHHHHH---hhcCCeEE-------EECCCHH--HHHHHHHHHhCCC----EEEEEEeCCccccc
Confidence 00 12223334443333222 22222222 2334422 2233345666664 5999999888765
Q ss_pred --chhHHHHHHHHHHhCCceEEcCCceEEEeC--CCCEEEEEeCCCceEEeecEEEECCCCCch-hhhhcCCCCCCCCce
Q psy8791 265 --SPFYAEKIHDILIGRGVDVHKGKALVEIDL--ANKEAVFKSEDKTERLPYAIMHVTPPMGPV-PELATSRLVDQSGYV 339 (706)
Q Consensus 265 --~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~-~~~~~~~l~~~~G~i 339 (706)
++.+.+.+.+.+++.||++++++.|.+++. +++.+..+.+++|+++++|.||+|+|.+|+ +++..+++..++| |
T Consensus 188 ~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~g-i 266 (431)
T 1q1r_A 188 VTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQVDNG-I 266 (431)
T ss_dssp TSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBSSS-E
T ss_pred hhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchhhccCCCCCCC-E
Confidence 578889999999999999999999999986 434343334457889999999999999999 5677788844456 9
Q ss_pred eeCccccccCCCCCEEEccccCCCCCCc--------hHHHHHHhHHHHHHHHH
Q psy8791 340 NVDKATLQHVKYSNVFAIGDCSNLPTSK--------TAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 340 ~vd~~~l~~~~~~~Ifa~GD~~~~~~~~--------~~~~a~~qg~~~a~ni~ 384 (706)
.||+ +++ |+.|+|||+|||+..+.+. .+..|..||+.+|+||.
T Consensus 267 ~Vd~-~~~-ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 317 (431)
T 1q1r_A 267 VINE-HMQ-TSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILC 317 (431)
T ss_dssp ECCT-TSB-CSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHT
T ss_pred EECC-Ccc-cCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhc
Confidence 9999 687 8999999999999875432 56889999999999995
No 19
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.97 E-value=1.7e-29 Score=277.44 Aligned_cols=291 Identities=15% Similarity=0.172 Sum_probs=209.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcc-cccccCccc---cCccccccccccc-CCCcEEEE-ce
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPM-FTLIGGGMK---KLSDSRRPMKSVL-PSGATWVK-DK 104 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~-~~~~~~~~~---~~~~~~~~~~~~~-~~~v~~i~-~~ 104 (706)
+||||||||+||++||.+|++..++.+|+|||+++...+.+. ++....+.. .++.+.....+.+ ..+++++. .+
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 80 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQ 80 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCE
Confidence 589999999999999999999867899999999987555432 332223322 2344443433333 36899866 56
Q ss_pred eEEEEcCCCEEEeCC-----CeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCcc
Q psy8791 105 IVSFDPENNRVRTQA-----GSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPS 179 (706)
Q Consensus 105 v~~id~~~~~v~~~~-----g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (706)
|+.++++.+.+.+.+ +.++.||+||+|||+.+..|++||.+
T Consensus 81 v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~i~g~~---------------------------------- 126 (452)
T 2cdu_A 81 VTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPPIPGID---------------------------------- 126 (452)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTT----------------------------------
T ss_pred EEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCCCCCCCC----------------------------------
Confidence 999998888888754 46799999999999999988889831
Q ss_pred chhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCC
Q psy8791 180 GLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGM 259 (706)
Q Consensus 180 ~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~ 259 (706)
. . .+....+......+.+.+ ..++.++ .++|+.. +......+.+.|. +|+++++.
T Consensus 127 -~------~--~v~~~~~~~~~~~~~~~~---~~~~~vv-------ViGgG~~--g~E~A~~l~~~g~----~Vtlv~~~ 181 (452)
T 2cdu_A 127 -S------S--RVYLCKNYNDAKKLFEEA---PKAKTIT-------IIGSGYI--GAELAEAYSNQNY----NVNLIDGH 181 (452)
T ss_dssp -S------T--TEEECSSHHHHHHHHHHG---GGCSEEE-------EECCSHH--HHHHHHHHHTTTC----EEEEEESS
T ss_pred -C------C--CEEEeCcHHHHHHHHHHh---ccCCeEE-------EECcCHH--HHHHHHHHHhcCC----EEEEEEcC
Confidence 0 0 122222333333333322 1222222 2333322 2222334555553 59999999
Q ss_pred CcCCC---chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchh-hhhcCCC-CC
Q psy8791 260 GVLFP---SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVP-ELATSRL-VD 334 (706)
Q Consensus 260 ~~~~~---~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~-~~~~~~l-~~ 334 (706)
+.+++ ++.+.+.+.+.+++.||+++++++|++++.+++.+..+.+ +|+++++|.||+|+|.+|+. ++... + .+
T Consensus 182 ~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~~~ll~~~-l~~~ 259 (452)
T 2cdu_A 182 ERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIGFRPNTELLKGK-VAML 259 (452)
T ss_dssp SSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCCEEECCGGGTTT-SCBC
T ss_pred CchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcCCCCCHHHHHHh-hhcC
Confidence 88775 6889999999999999999999999999864445544444 67899999999999999994 44444 6 57
Q ss_pred CCCceeeCccccccCCCCCEEEccccCCCCC--------CchHHHHHHhHHHHHHHHH
Q psy8791 335 QSGYVNVDKATLQHVKYSNVFAIGDCSNLPT--------SKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 335 ~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~--------~~~~~~a~~qg~~~a~ni~ 384 (706)
++|+|.||+ ++| |+.|||||+|||+..+. ++++..|..||+++|+||.
T Consensus 260 ~~G~i~Vd~-~~~-t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 315 (452)
T 2cdu_A 260 DNGAIITDE-YMH-SSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLT 315 (452)
T ss_dssp TTSCBCCCT-TSB-CSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSS
T ss_pred CCCCEEECC-CcC-cCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhC
Confidence 789999999 688 79999999999998632 3578999999999999994
No 20
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.97 E-value=9.9e-30 Score=279.29 Aligned_cols=291 Identities=18% Similarity=0.257 Sum_probs=202.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcc-cccccCcc-ccCcccccc-cccccCCCcEEEE-ceeE
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPM-FTLIGGGM-KKLSDSRRP-MKSVLPSGATWVK-DKIV 106 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~-~~~~~~~~-~~~~~~~~~-~~~~~~~~v~~i~-~~v~ 106 (706)
++|||||||+||++||.+|+++.++++|+|||++++..|.+. ++....+. ...+.+... ...+.+.++++.. .+|+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 699999999999999999999877899999999998776653 33333322 233344332 2333447888854 7899
Q ss_pred EEEcCCCEEEeC---CCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhh
Q psy8791 107 SFDPENNRVRTQ---AGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQE 183 (706)
Q Consensus 107 ~id~~~~~v~~~---~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 183 (706)
++|++.+.+.+. ++.++.||+||+|||+.+..|++||.+ .+..+..+.++
T Consensus 83 ~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~-----------------~~~v~~~~~~~---------- 135 (452)
T 3oc4_A 83 AMDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIRGSQ-----------------TEKLLKYKFLS---------- 135 (452)
T ss_dssp EEETTTTEEEEEETTEEEEEECSEEEECCCCCBCCCCCBTTT-----------------CTTEEEGGGCC----------
T ss_pred EEECCCCEEEEEecCceEEEEcCEEEECCCcccCCCCCCCCC-----------------CCCEEEeCCHH----------
Confidence 999999988763 456899999999999999988899832 00111111111
Q ss_pred hhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCC
Q psy8791 184 ALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLF 263 (706)
Q Consensus 184 ~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~ 263 (706)
....+.+... .++.+ +.++|+.. +......+.+.|. +|+++++.+.++
T Consensus 136 ----------------~~~~~~~~~~---~~~~v-------vViGgG~~--g~E~A~~l~~~g~----~Vtlv~~~~~~l 183 (452)
T 3oc4_A 136 ----------------GALAAVPLLE---NSQTV-------AVIGAGPI--GMEAIDFLVKMKK----TVHVFESLENLL 183 (452)
T ss_dssp --------------------CCHHHH---TCSEE-------EEECCSHH--HHHHHHHHHHTTC----EEEEEESSSSSS
T ss_pred ----------------HHHHHHHHHh---cCCEE-------EEECCCHH--HHHHHHHHHhCCC----eEEEEEccCccc
Confidence 1111111111 11111 22333322 2233345666663 599999998887
Q ss_pred C---chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhcCCC-CCCCCce
Q psy8791 264 P---SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELATSRL-VDQSGYV 339 (706)
Q Consensus 264 ~---~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~~l-~~~~G~i 339 (706)
+ ++.+.+.+.+.+++.||+++++++|++++.+++.+.+ .+++| ++++|.||+|+|.+|+..+.+..+ .+++|+|
T Consensus 184 ~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v-~~~~g-~i~aD~Vv~A~G~~p~~~~l~~~~~~~~~g~i 261 (452)
T 3oc4_A 184 PKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVL-ETSEQ-EISCDSGIFALNLHPQLAYLDKKIQRNLDQTI 261 (452)
T ss_dssp TTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEE-EESSC-EEEESEEEECSCCBCCCSSCCTTSCBCTTSCB
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEE-EECCC-EEEeCEEEECcCCCCChHHHHhhhccCCCCCE
Confidence 5 6889999999999999999999999999854444533 33455 899999999999999965544445 6788999
Q ss_pred eeCccccccCCCCCEEEccccCCCCC--------CchHHHHHHhHHHHHHHHH
Q psy8791 340 NVDKATLQHVKYSNVFAIGDCSNLPT--------SKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 340 ~vd~~~l~~~~~~~Ifa~GD~~~~~~--------~~~~~~a~~qg~~~a~ni~ 384 (706)
.||+ ++| |+.|||||+|||+..+. ++++..|..||+++|+||.
T Consensus 262 ~vd~-~~~-t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~ 312 (452)
T 3oc4_A 262 AVDA-YLQ-TSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLE 312 (452)
T ss_dssp CCCT-TCB-CSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSS
T ss_pred EECc-Ccc-CCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhc
Confidence 9999 688 89999999999998642 2578899999999999984
No 21
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.97 E-value=1.1e-28 Score=272.67 Aligned_cols=294 Identities=17% Similarity=0.196 Sum_probs=213.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCc-ccccccCcc-ccCcccccc-cccccC-CCcEEEE-ce
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQP-MFTLIGGGM-KKLSDSRRP-MKSVLP-SGATWVK-DK 104 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p-~~~~~~~~~-~~~~~~~~~-~~~~~~-~~v~~i~-~~ 104 (706)
++||||||||+||++||.+|++..++.+|+|||+++...+.+ .++....+. ...+.+... ...+.+ .+++++. .+
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~ 115 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHE 115 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCE
Confidence 479999999999999999999975689999999998765553 344332222 123333222 233323 4899887 68
Q ss_pred eEEEEcCCCEEEeCC---Ce--EEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCcc
Q psy8791 105 IVSFDPENNRVRTQA---GS--EISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPS 179 (706)
Q Consensus 105 v~~id~~~~~v~~~~---g~--~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (706)
|+.++++.+.+.+.+ |+ ++.||+||+|||+.+..|++||.+
T Consensus 116 v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~---------------------------------- 161 (480)
T 3cgb_A 116 VTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWEGRD---------------------------------- 161 (480)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCBTTT----------------------------------
T ss_pred EEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCCCCCCcc----------------------------------
Confidence 999999888887753 65 799999999999999888888831
Q ss_pred chhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCC
Q psy8791 180 GLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGM 259 (706)
Q Consensus 180 ~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~ 259 (706)
. . .+.+..+.+.+..+.+.+......+++ .++|++. +......+.+.|. +|+++++.
T Consensus 162 ---~----~--~v~~~~~~~~~~~l~~~~~~~~~~~vv--------ViGgG~~--g~e~A~~l~~~g~----~Vtlv~~~ 218 (480)
T 3cgb_A 162 ---L----Q--GVHLLKTIPDAERILKTLETNKVEDVT--------IIGGGAI--GLEMAETFVELGK----KVRMIERN 218 (480)
T ss_dssp ---S----B--TEECCSSHHHHHHHHHHHHSSCCCEEE--------EECCHHH--HHHHHHHHHHTTC----EEEEECCG
T ss_pred ---C----C--CEEEeCCHHHHHHHHHHhhhcCCCeEE--------EECCCHH--HHHHHHHHHhcCC----eEEEEEeC
Confidence 0 0 223333445555555444432222222 2344432 2223345666664 59999998
Q ss_pred CcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch-hhhhcCCC-CCC
Q psy8791 260 GVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV-PELATSRL-VDQ 335 (706)
Q Consensus 260 ~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~-~~~~~~~l-~~~ 335 (706)
+.+++ ++.+.+.+.+.+++.||++++++.|.+++.+++ +..+.+ ++.++++|.||+|+|.+|+ +++...++ .++
T Consensus 219 ~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-v~~v~~-~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~~ 296 (480)
T 3cgb_A 219 DHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNER-VEAVET-DKGTYKADLVLVSVGVKPNTDFLEGTNIRTNH 296 (480)
T ss_dssp GGTTSSSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSB-EEEEEE-TTEEEECSEEEECSCEEESCGGGTTSCCCBCT
T ss_pred CchhhcCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCc-EEEEEE-CCCEEEcCEEEECcCCCcChHHHHhCCcccCC
Confidence 88876 688999999999999999999999999987643 332233 3568999999999999999 56677787 677
Q ss_pred CCceeeCccccccCCCCCEEEccccCCCCC--------CchHHHHHHhHHHHHHHHH
Q psy8791 336 SGYVNVDKATLQHVKYSNVFAIGDCSNLPT--------SKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 336 ~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~--------~~~~~~a~~qg~~~a~ni~ 384 (706)
+|+|.||+ ++| |+.|+|||+|||+..+. ++++..|..||+++|+||.
T Consensus 297 ~G~I~Vd~-~~~-ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 351 (480)
T 3cgb_A 297 KGAIEVNA-YMQ-TNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNML 351 (480)
T ss_dssp TSCBCCCT-TSB-CSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHT
T ss_pred CCCEEECC-Ccc-CCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhc
Confidence 89999999 688 78999999999997532 2568899999999999995
No 22
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.97 E-value=4.4e-29 Score=276.74 Aligned_cols=304 Identities=15% Similarity=0.168 Sum_probs=209.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhc-CCCeEEEEcCCCCcccCc-ccccccCcc-ccCccccccccccc-CCCcEEEE-ce
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKL-GKGQVSIVEPTDDHYYQP-MFTLIGGGM-KKLSDSRRPMKSVL-PSGATWVK-DK 104 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~-~~~~Vtlie~~~~~~~~p-~~~~~~~~~-~~~~~~~~~~~~~~-~~~v~~i~-~~ 104 (706)
+++|||||||+||++||..|++.. ++.+|+|||+++...+.+ .++....+. ..++.+..+..+.+ ..+++++. .+
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~ 114 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESP 114 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCE
Confidence 479999999999999999999983 349999999998755543 233222222 23344433333333 36889865 56
Q ss_pred eEEEEcCCCEEEeC-CC--eEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccch
Q psy8791 105 IVSFDPENNRVRTQ-AG--SEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGL 181 (706)
Q Consensus 105 v~~id~~~~~v~~~-~g--~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 181 (706)
|+.++++.+.+.+. ++ .++.||+||+|||+.+..|++||.+ .+.+...| ...
T Consensus 115 v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~---~~~~~~~f-----------~~~----------- 169 (490)
T 2bc0_A 115 VQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIKGAE---IKEGSLEF-----------EAT----------- 169 (490)
T ss_dssp EEEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCCSCBTCC---BCTTCTTC-----------CBS-----------
T ss_pred EEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCCCCCCcc---cccccccc-----------ccc-----------
Confidence 99999998988886 54 4789999999999999888888821 00000000 000
Q ss_pred hhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCc
Q psy8791 182 QEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGV 261 (706)
Q Consensus 182 ~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~ 261 (706)
.. .+....+......+.+.+......+++ .++|+.. +......+.+.|. +|+++++.+.
T Consensus 170 -----~~--~v~~~~~~~~~~~~~~~~~~~~~~~vv--------VIGgG~i--g~E~A~~l~~~g~----~Vtlv~~~~~ 228 (490)
T 2bc0_A 170 -----LE--NLQFVKLYQNSADVIAKLENKDIKRVA--------VVGAGYI--GVELAEAFQRKGK----EVVLIDVVDT 228 (490)
T ss_dssp -----ST--TEEECSSHHHHHHHHHHTTSTTCCEEE--------EECCSHH--HHHHHHHHHHTTC----EEEEEESSSS
T ss_pred -----cC--CEEEeCCHHHHHHHHHHhhhcCCceEE--------EECCCHH--HHHHHHHHHHCCC----eEEEEEcccc
Confidence 00 233333344444444333112222222 2344422 2222334666664 5999999988
Q ss_pred CCC---chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchh-hhhcCCC-CCCC
Q psy8791 262 LFP---SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVP-ELATSRL-VDQS 336 (706)
Q Consensus 262 ~~~---~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~-~~~~~~l-~~~~ 336 (706)
+++ ++++.+.+.+.|++.||+++++++|++++.+++ +..+.+ +|+++++|.||+|+|.+|+. ++... + .+++
T Consensus 229 ~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ll~~~-l~~~~~ 305 (490)
T 2bc0_A 229 CLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGNGK-VEKIIT-DKNEYDVDMVILAVGFRPNTTLGNGK-IDLFRN 305 (490)
T ss_dssp TTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEECSSS-CCEEEE-SSCEEECSEEEECCCEEECCGGGTTC-SCBCTT
T ss_pred hhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcCCc-EEEEEE-CCcEEECCEEEECCCCCcChHHHHhh-hccCCC
Confidence 875 688999999999999999999999999987443 221122 57889999999999999994 44444 6 5778
Q ss_pred CceeeCccccccCCCCCEEEccccCCCCC--------CchHHHHHHhHHHHHHHHH
Q psy8791 337 GYVNVDKATLQHVKYSNVFAIGDCSNLPT--------SKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 337 G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~--------~~~~~~a~~qg~~~a~ni~ 384 (706)
|+|.||+ ++| |+.|||||+|||+..+. ++++..|..||+++|+||.
T Consensus 306 G~I~Vd~-~~~-t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 359 (490)
T 2bc0_A 306 GAFLVNK-RQE-TSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNAC 359 (490)
T ss_dssp SCBCCCT-TCB-CSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHT
T ss_pred CCEEECC-Ccc-cCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhc
Confidence 9999999 688 79999999999998532 3578899999999999995
No 23
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.97 E-value=1.1e-28 Score=265.30 Aligned_cols=306 Identities=17% Similarity=0.234 Sum_probs=214.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-cccccccCccccCccccc-cccccc-CCCcEEEE-cee
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-PMFTLIGGGMKKLSDSRR-PMKSVL-PSGATWVK-DKI 105 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-p~~~~~~~~~~~~~~~~~-~~~~~~-~~~v~~i~-~~v 105 (706)
+++|||||||+||++||..|++...+.+|+|||+++...|. |.++...........+.. ....+. ..+++++. .+|
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v 83 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHTRV 83 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEECSCCC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEeCCEE
Confidence 47999999999999999999998444789999998854443 444433222222222322 233333 36899886 579
Q ss_pred EEEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhh
Q psy8791 106 VSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEAL 185 (706)
Q Consensus 106 ~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 185 (706)
+.++++.++|.+.+ .++.||+||+|||+.+..|++||.+ ..
T Consensus 84 ~~i~~~~~~v~~~~-~~~~~d~lviAtG~~p~~p~i~g~~-----------------------------------~~--- 124 (384)
T 2v3a_A 84 TGIDPGHQRIWIGE-EEVRYRDLVLAWGAEPIRVPVEGDA-----------------------------------QD--- 124 (384)
T ss_dssp CEEEGGGTEEEETT-EEEECSEEEECCCEEECCCCCBSTT-----------------------------------TT---
T ss_pred EEEECCCCEEEECC-cEEECCEEEEeCCCCcCCCCCCCcC-----------------------------------cC---
Confidence 99999888898875 4799999999999999888888821 00
Q ss_pred cCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC-
Q psy8791 186 DQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP- 264 (706)
Q Consensus 186 ~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~- 264 (706)
.+.+..+...+..+.+.+. .++.++ .++|+.. +......+.+.|. +|+++++.+.+++
T Consensus 125 -----~v~~~~~~~~~~~~~~~~~---~~~~v~-------ViGgG~~--g~e~A~~l~~~g~----~Vtlv~~~~~~~~~ 183 (384)
T 2v3a_A 125 -----ALYPINDLEDYARFRQAAA---GKRRVL-------LLGAGLI--GCEFANDLSSGGY----QLDVVAPCEQVMPG 183 (384)
T ss_dssp -----CEEECSSHHHHHHHHHHHT---TCCEEE-------EECCSHH--HHHHHHHHHHTTC----EEEEEESSSSSSTT
T ss_pred -----CEEEECCHHHHHHHHHhhc---cCCeEE-------EECCCHH--HHHHHHHHHhCCC----eEEEEecCcchhhc
Confidence 1222222333333333332 122222 2344432 2233345666664 5999999888775
Q ss_pred --chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchh-hhhcCCCCCCCCceee
Q psy8791 265 --SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVP-ELATSRLVDQSGYVNV 341 (706)
Q Consensus 265 --~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~-~~~~~~l~~~~G~i~v 341 (706)
++.+.+.+.+.+++.||+++++++|.+++.+++.+.+. +++|+++++|.||+|+|.+|+. ++.+.++..++| |.|
T Consensus 184 ~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~-~~~g~~i~~d~vv~a~G~~p~~~l~~~~g~~~~~g-i~v 261 (384)
T 2v3a_A 184 LLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAH-LSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVNRG-IVV 261 (384)
T ss_dssp TSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEE-ETTSCEEEESEEEECSCEEECCHHHHHTTCCBSSS-EEE
T ss_pred ccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEE-ECCCCEEECCEEEECcCCCcCHHHHHHCCCCCCCC-EEE
Confidence 67888999999999999999999999998655544443 3478899999999999999995 667788843468 999
Q ss_pred CccccccCCCCCEEEccccCCCCC--CchHHHHHHhHHHHHHHHHHHHcCCCCCCcccceeeEE
Q psy8791 342 DKATLQHVKYSNVFAIGDCSNLPT--SKTAAAVAGQCKVVYDNLSAVMKNRALPHEYNGYTSCP 403 (706)
Q Consensus 342 d~~~l~~~~~~~Ifa~GD~~~~~~--~~~~~~a~~qg~~~a~ni~~~l~g~~~~~~~~~~~~~~ 403 (706)
|+ ++| |+.|||||+|||+..+. ...+..|..||+++|+||. |++.++.|.....++
T Consensus 262 d~-~~~-t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~----g~~~~~~~~~~p~~~ 319 (384)
T 2v3a_A 262 DR-SLR-TSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLA----GNPSQVAYGPMPVTV 319 (384)
T ss_dssp CT-TCB-CSSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHT----TCCCCCCCCCCCEEE
T ss_pred CC-CCC-CCCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhc----CCCccCCCCCcceEE
Confidence 99 688 89999999999996432 2356778999999999994 554455555544443
No 24
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.97 E-value=9.2e-29 Score=271.27 Aligned_cols=292 Identities=15% Similarity=0.213 Sum_probs=208.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCc-ccccccCcc-ccCcccccccccc-cCCCcEEEE-ceeE
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQP-MFTLIGGGM-KKLSDSRRPMKSV-LPSGATWVK-DKIV 106 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p-~~~~~~~~~-~~~~~~~~~~~~~-~~~~v~~i~-~~v~ 106 (706)
+||||||||+||++||..|++..++.+|+|||+++...|.+ .++....+. ...+.+.....+. .+.+++++. .+|+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 80 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEIT 80 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 48999999999999999999986689999999998765544 233322222 2233333333333 336899855 6888
Q ss_pred EEEcCCCEEEeCC---Ce--EEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccch
Q psy8791 107 SFDPENNRVRTQA---GS--EISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGL 181 (706)
Q Consensus 107 ~id~~~~~v~~~~---g~--~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 181 (706)
.++++.+.|.+.+ |+ ++.||+||+|||+.+..|++||.+ .
T Consensus 81 ~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~-----------------------------------~ 125 (447)
T 1nhp_A 81 AIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKD-----------------------------------L 125 (447)
T ss_dssp EEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCSTTTT-----------------------------------S
T ss_pred EEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCCCCCCCC-----------------------------------C
Confidence 9999999888754 54 489999999999999988899821 0
Q ss_pred hhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCc
Q psy8791 182 QEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGV 261 (706)
Q Consensus 182 ~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~ 261 (706)
. .+.+..+.+.+..+.+.+......+++ .++|++. +......+++.|. +|+++++.+.
T Consensus 126 ------~--~v~~~~~~~~~~~l~~~~~~~~~~~vv--------IiG~G~~--g~e~A~~l~~~g~----~Vtlv~~~~~ 183 (447)
T 1nhp_A 126 ------D--NIYLMRGRQWAIKLKQKTVDPEVNNVV--------VIGSGYI--GIEAAEAFAKAGK----KVTVIDILDR 183 (447)
T ss_dssp ------B--SEECCCHHHHHHHHHHHHTCTTCCEEE--------EECCSHH--HHHHHHHHHHTTC----EEEEEESSSS
T ss_pred ------C--CeEEECCHHHHHHHHHHhhhcCCCeEE--------EECCCHH--HHHHHHHHHHCCC----eEEEEecCcc
Confidence 0 122222333344444433321222222 2344432 2333345666664 5999999888
Q ss_pred CCC---chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch-hhhhcCCC-CCCC
Q psy8791 262 LFP---SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV-PELATSRL-VDQS 336 (706)
Q Consensus 262 ~~~---~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~-~~~~~~~l-~~~~ 336 (706)
+++ ++++.+.+.+.+++.||++++++.|.+++.+++ +..+.+ +++++++|.||+|+|.+|+ +++... + .+++
T Consensus 184 ~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-v~~v~~-~~~~i~~d~vi~a~G~~p~~~~~~~~-~~~~~~ 260 (447)
T 1nhp_A 184 PLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGR-VQKVVT-DKNAYDADLVVVAVGVRPNTAWLKGT-LELHPN 260 (447)
T ss_dssp TTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEECSSB-CCEEEE-SSCEEECSEEEECSCEEESCGGGTTT-SCBCTT
T ss_pred cccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEccCc-EEEEEE-CCCEEECCEEEECcCCCCChHHHHhh-hhhcCC
Confidence 764 578899999999999999999999999987643 311222 4678999999999999999 455555 6 5678
Q ss_pred CceeeCccccccCCCCCEEEccccCCCCC--------CchHHHHHHhHHHHHHHHH
Q psy8791 337 GYVNVDKATLQHVKYSNVFAIGDCSNLPT--------SKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 337 G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~--------~~~~~~a~~qg~~~a~ni~ 384 (706)
|+|.||+ +++ |+.|+|||+|||+..+. ++++..|..||+++|+||.
T Consensus 261 G~i~Vd~-~~~-t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 314 (447)
T 1nhp_A 261 GLIKTDE-YMR-TSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLE 314 (447)
T ss_dssp SCBCCCT-TCB-CSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSS
T ss_pred CcEEECc-ccc-CCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhc
Confidence 9999999 687 79999999999997532 3578899999999999994
No 25
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.97 E-value=8.6e-29 Score=274.11 Aligned_cols=321 Identities=15% Similarity=0.129 Sum_probs=213.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-cccc--cccCccc--------------------cCcc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-PMFT--LIGGGMK--------------------KLSD 85 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-p~~~--~~~~~~~--------------------~~~~ 85 (706)
..++|||||||+||++||..|++..++.+|+|||+++++.|. |.+. ...+... .+..
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPS 89 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCGG
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccchH
Confidence 457899999999999999999988678999999999876554 2111 1111000 0000
Q ss_pred cccccccc---cCCCcEEEEc-eeEEEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCccccccccccccccccc
Q psy8791 86 SRRPMKSV---LPSGATWVKD-KIVSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFV 161 (706)
Q Consensus 86 ~~~~~~~~---~~~~v~~i~~-~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 161 (706)
.......+ ...+++++.+ +|+.||++.++|.+++|.++.||+||+|||+.+..+++++..
T Consensus 90 ~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p~~~~~~~~~---------------- 153 (493)
T 1m6i_A 90 FYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRA---------------- 153 (493)
T ss_dssp GSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEECCCHHHHTS----------------
T ss_pred hhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCCCcccc----------------
Confidence 00011111 2357899886 999999999999999998999999999999988765544410
Q ss_pred ccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhH--HHHHHHH
Q psy8791 162 TFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPM--KAVLIGD 239 (706)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~--~~~~~~~ 239 (706)
...... .+....+.+.+..+.+.+.. +.++++ ++|+.. |++....
T Consensus 154 -------------------~~~~~~----~v~~~~~~~d~~~l~~~~~~--~~~vvV--------iGgG~iG~E~A~~l~ 200 (493)
T 1m6i_A 154 -------------------GAEVKS----RTTLFRKIGDFRSLEKISRE--VKSITI--------IGGGFLGSELACALG 200 (493)
T ss_dssp -------------------CHHHHH----TEEECCSHHHHHHHHHHHHH--CSEEEE--------ECCSHHHHHHHHHHH
T ss_pred -------------------cccccC----ceEEEcCHHHHHHHHHHhhc--CCeEEE--------ECCCHHHHHHHHHHH
Confidence 000000 12222233444444333321 222222 334422 3333333
Q ss_pred HHHHHcCCCCCcEEEEEeCCCcCCC---chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEE
Q psy8791 240 EYLRKHKKRDAAKLTYCTGMGVLFP---SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMH 316 (706)
Q Consensus 240 ~~l~~~g~~~~~~v~l~~~~~~~~~---~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI 316 (706)
...++.| ++|+++++.+.+++ ++.+.+.+.+.++++||++++++.|.+++.+++.+.+ .+++|+++++|+||
T Consensus 201 ~~~~~~g----~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v-~l~dG~~i~aD~Vv 275 (493)
T 1m6i_A 201 RKARALG----TEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLI-KLKDGRKVETDHIV 275 (493)
T ss_dssp HHHHHHT----CEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEE-EETTSCEEEESEEE
T ss_pred hhhhhcC----CEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEE-EECCCCEEECCEEE
Confidence 3233334 35899988765443 5788899999999999999999999999865544433 34578899999999
Q ss_pred ECCCCCchh-hhhcCCC-CCC-CCceeeCccccccCCCCCEEEccccCCCCCC-------chHHHHHHhHHHHHHHHHHH
Q psy8791 317 VTPPMGPVP-ELATSRL-VDQ-SGYVNVDKATLQHVKYSNVFAIGDCSNLPTS-------KTAAAVAGQCKVVYDNLSAV 386 (706)
Q Consensus 317 ~a~G~~~~~-~~~~~~l-~~~-~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~-------~~~~~a~~qg~~~a~ni~~~ 386 (706)
+|+|.+|+. ++..+++ .++ +|+|.||+ ++| + .|||||+|||+..+.+ ..+..|..||+.+|+||.
T Consensus 276 ~a~G~~pn~~l~~~~gl~~~~~~ggi~Vd~-~l~-t-~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~-- 350 (493)
T 1m6i_A 276 AAVGLEPNVELAKTGGLEIDSDFGGFRVNA-ELQ-A-RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMT-- 350 (493)
T ss_dssp ECCCEEECCTTHHHHTCCBCTTTCSEECCT-TCE-E-ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHT--
T ss_pred ECCCCCccHHHHHHcCCccccCCCcEEECC-Ccc-c-CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhc--
Confidence 999999995 6666787 454 68899999 688 4 6999999999975422 256789999999999995
Q ss_pred HcCCCCCCcccceeeEEEEecCCeEE
Q psy8791 387 MKNRALPHEYNGYTSCPLVTGYSKCV 412 (706)
Q Consensus 387 l~g~~~~~~~~~~~~~~~~~G~~~~~ 412 (706)
|...++.+ ...+...+|...++
T Consensus 351 --g~~~~~~~--~~~~~s~~~~~~~~ 372 (493)
T 1m6i_A 351 --GAAKPYWH--QSMFWSDLGPDVGY 372 (493)
T ss_dssp --SCCCCCCC--CCEEEEESSTTCEE
T ss_pred --CCCCCcCC--cCceeeeeccCcce
Confidence 55444333 33455677766555
No 26
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.96 E-value=1.2e-28 Score=258.51 Aligned_cols=294 Identities=17% Similarity=0.173 Sum_probs=197.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC--CcccCcccccccCc-cccCcccccccccc-cCCCcEEEEcee
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD--DHYYQPMFTLIGGG-MKKLSDSRRPMKSV-LPSGATWVKDKI 105 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~--~~~~~p~~~~~~~~-~~~~~~~~~~~~~~-~~~~v~~i~~~v 105 (706)
+++|+|||||+||++||.+|+++ +++|+|||++. ...+.+.....+.. ......+...+.+. ...+++++.++|
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v 92 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARY--MLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIV 92 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEESCE
T ss_pred ccCEEEECccHHHHHHHHHHHHC--CCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEEEEE
Confidence 57999999999999999999998 89999999981 11111111111110 01112222223232 236788888999
Q ss_pred EEEEcCCC--EEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhh
Q psy8791 106 VSFDPENN--RVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQE 183 (706)
Q Consensus 106 ~~id~~~~--~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 183 (706)
++++.+.+ .+.+.++.++.||+||+|||+.+..+.+||.+ .|..+.
T Consensus 93 ~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~--------------------~~~~~~------------ 140 (323)
T 3f8d_A 93 EKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQ--------------------EFAGRG------------ 140 (323)
T ss_dssp EEEEEC--CEEEEESSSCEEEEEEEEECCCCEECCCCCTTTT--------------------TTBTTT------------
T ss_pred EEEEecCCEEEEEECCCCEEEcCEEEECcCCCCccCCCCchh--------------------hhcCCc------------
Confidence 99998755 57777878999999999999999888888831 000010
Q ss_pred hhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCC
Q psy8791 184 ALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLF 263 (706)
Q Consensus 184 ~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~ 263 (706)
+.. . . .. ....+.+.+++ .++++.. ... ....+.+.+. +++++++.+.++
T Consensus 141 --------~~~-~--~----~~-~~~~~~~~~v~--------vvG~G~~-~~e-~a~~l~~~g~----~v~~~~~~~~~~ 190 (323)
T 3f8d_A 141 --------ISY-C--S----VA-DAPLFKNRVVA--------VIGGGDS-ALE-GAEILSSYST----KVYLIHRRDTFK 190 (323)
T ss_dssp --------EES-C--H----HH-HGGGGTTCEEE--------EECCSHH-HHH-HHHHHHHHSS----EEEEECSSSSCC
T ss_pred --------eEE-e--c----cC-CHhHcCCCEEE--------EECCCHH-HHH-HHHHHHHhCC----eEEEEEeCCCCC
Confidence 100 0 0 00 00111222222 2333322 122 2233455553 599999998887
Q ss_pred CchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCE--EEEEeCCCce--EEeecEEEECCCCCch-hhhhcCCC-CCCCC
Q psy8791 264 PSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKE--AVFKSEDKTE--RLPYAIMHVTPPMGPV-PELATSRL-VDQSG 337 (706)
Q Consensus 264 ~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~--v~~~~~~~g~--~i~~D~vI~a~G~~~~-~~~~~~~l-~~~~G 337 (706)
+.+. .+++.+++.||++++++.+.+++.+++. +.+....+|+ ++++|.||+|+|++|+ +++...++ .+++|
T Consensus 191 ~~~~---~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~~~~~g 267 (323)
T 3f8d_A 191 AQPI---YVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNG 267 (323)
T ss_dssp SCHH---HHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTCCBCTTS
T ss_pred cCHH---HHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCeeecCCC
Confidence 6433 2333444569999999999999876542 4444323355 7999999999999999 77777888 68899
Q ss_pred ceeeCccccccCCCCCEEEccccCCCC-CCchHHHHHHhHHHHHHHHHHHHcCCCC
Q psy8791 338 YVNVDKATLQHVKYSNVFAIGDCSNLP-TSKTAAAVAGQCKVVYDNLSAVMKNRAL 392 (706)
Q Consensus 338 ~i~vd~~~l~~~~~~~Ifa~GD~~~~~-~~~~~~~a~~qg~~~a~ni~~~l~g~~~ 392 (706)
++.||+ +++ |+.|||||+|||+..+ .++++..|..||+.+|.||.+.+.+++.
T Consensus 268 ~i~vd~-~~~-t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~ 321 (323)
T 3f8d_A 268 YIKVDE-WMR-TSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEKKG 321 (323)
T ss_dssp SBCCCT-TCB-CSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred cEecCC-Cce-ecCCCEEEcceecCCCCcccceeehhhHHHHHHHHHHHHHHHhhc
Confidence 999999 787 8999999999999864 4578999999999999999999987654
No 27
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.96 E-value=1e-28 Score=260.56 Aligned_cols=301 Identities=17% Similarity=0.153 Sum_probs=204.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcc-----c--ccccC-ccccCcccccccccc-cCCCcEE
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPM-----F--TLIGG-GMKKLSDSRRPMKSV-LPSGATW 100 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~-----~--~~~~~-~~~~~~~~~~~~~~~-~~~~v~~ 100 (706)
+++|+|||||+||+++|..|+++ +++|+|||+++.+...+. . ...+. .......+...+.+. ...++++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 82 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMR--GLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVY 82 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEE
Confidence 57999999999999999999998 899999999876432211 0 00000 000111111122222 2346777
Q ss_pred EE-ceeEEEEcCCC--EEEeCCCeEEEecEEEEcccc---ccccCCCCCCcccccccccccccccccccCccCCcccccc
Q psy8791 101 VK-DKIVSFDPENN--RVRTQAGSEISYEYMIVASGI---QMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDF 174 (706)
Q Consensus 101 i~-~~v~~id~~~~--~v~~~~g~~~~yd~lviAtG~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (706)
.. .+|+.++.+.. .|.+.++.++.||+||+|||+ .+..+.+||.+ .|..+
T Consensus 83 ~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~g~~--------------------~~~~~---- 138 (335)
T 2zbw_A 83 SLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAPGER--------------------EFEGR---- 138 (335)
T ss_dssp EESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCCCTTTT--------------------TTBTT----
T ss_pred EeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCCCCChh--------------------hccCc----
Confidence 54 68999987654 466677778999999999998 46666677721 00000
Q ss_pred ccCccchhhhhcCCCCCcccC-CChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEE
Q psy8791 175 LRRPSGLQEALDQPDSGVSTN-YSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKL 253 (706)
Q Consensus 175 ~~~~~~l~~~~~~~~~~v~~~-~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v 253 (706)
.+... .+. ..+.+.+++ .++|+.. ...+ ...+.+.+ .+|
T Consensus 139 ----------------~~~~~~~~~----------~~~~~~~v~--------viG~G~~-g~e~-a~~l~~~g----~~V 178 (335)
T 2zbw_A 139 ----------------GVYYAVKSK----------AEFQGKRVL--------IVGGGDS-AVDW-ALNLLDTA----RRI 178 (335)
T ss_dssp ----------------TEESSCSCG----------GGGTTCEEE--------EECSSHH-HHHH-HHHTTTTS----SEE
T ss_pred ----------------EEEEecCch----------hhcCCCEEE--------EECCCHH-HHHH-HHHHHhhC----CEE
Confidence 00000 000 011222222 2334322 1222 22333333 369
Q ss_pred EEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCC--EEEEEeCCCc--eEEeecEEEECCCCCch-hhhh
Q psy8791 254 TYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANK--EAVFKSEDKT--ERLPYAIMHVTPPMGPV-PELA 328 (706)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~--~v~~~~~~~g--~~i~~D~vI~a~G~~~~-~~~~ 328 (706)
+++++.+.+++.+...+.+++.+++.||++++++.|.+++.+++ .+.+....+| +++++|.||+|+|++|+ +++.
T Consensus 179 ~~v~~~~~~~~~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~ 258 (335)
T 2zbw_A 179 TLIHRRPQFRAHEASVKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLA 258 (335)
T ss_dssp EEECSSSSCCSCHHHHHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGG
T ss_pred EEEEcCCccCccHHHHHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhh
Confidence 99999988877777888899999999999999999999987644 3555433245 68999999999999999 5777
Q ss_pred cCCCCCCCCceeeCccccccCCCCCEEEccccCCCC-CCchHHHHHHhHHHHHHHHHHHHcCCCC-CCcccc
Q psy8791 329 TSRLVDQSGYVNVDKATLQHVKYSNVFAIGDCSNLP-TSKTAAAVAGQCKVVYDNLSAVMKNRAL-PHEYNG 398 (706)
Q Consensus 329 ~~~l~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~-~~~~~~~a~~qg~~~a~ni~~~l~g~~~-~~~~~~ 398 (706)
+.++..++|++.||+ +++ |+.|||||+|||+..+ .++++..|..||+.+|+||...+.+.+. ++.|..
T Consensus 259 ~~~~~~~~g~i~vd~-~~~-t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~~~~~~~~ 328 (335)
T 2zbw_A 259 NWGLALEKNKIKVDT-TMA-TSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAAYANPALKVNPGHSS 328 (335)
T ss_dssp GSCCCEETTEEECCT-TCB-CSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHHHHHCTTSCSSCCCGG
T ss_pred hcceeccCCeeeeCC-CCC-CCCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHHHHhhhhhccCCcccc
Confidence 778743479999999 788 8999999999999765 3578899999999999999999988765 444544
No 28
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.96 E-value=6.3e-29 Score=262.38 Aligned_cols=297 Identities=15% Similarity=0.164 Sum_probs=195.9
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCccccc--------ccCc--cccCccccccccccc-
Q psy8791 26 SSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTL--------IGGG--MKKLSDSRRPMKSVL- 94 (706)
Q Consensus 26 ~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~--------~~~~--~~~~~~~~~~~~~~~- 94 (706)
....+++|+|||||+|||+||..|+++ +++|+|||+++.+...+.-.. +++- ......+...+.+.+
T Consensus 18 ~~~~~~~vvIIG~G~aGl~aA~~l~~~--g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (338)
T 3itj_A 18 GSHVHNKVTIIGSGPAAHTAAIYLARA--EIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQST 95 (338)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHT--TCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEECcCHHHHHHHHHHHHC--CCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHH
Confidence 334567999999999999999999999 899999999762222221100 0000 001111222222222
Q ss_pred CCCcEEEEceeEEEEcCCCEEEe-----CCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCc
Q psy8791 95 PSGATWVKDKIVSFDPENNRVRT-----QAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPR 169 (706)
Q Consensus 95 ~~~v~~i~~~v~~id~~~~~v~~-----~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (706)
..+++++.++|++++++.+.+.+ .++.++.||+||+|||+.+..+.+||.
T Consensus 96 ~~gv~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~~~~g~------------------------- 150 (338)
T 3itj_A 96 KFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGE------------------------- 150 (338)
T ss_dssp HTTCEEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCCCCTTH-------------------------
T ss_pred HcCCEEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCCCCCCc-------------------------
Confidence 36899998889999998876555 466789999999999999988889982
Q ss_pred cccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCC
Q psy8791 170 RTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRD 249 (706)
Q Consensus 170 ~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~ 249 (706)
...... .+.. . ......+....+.+++ .++++.. +......+.+.+
T Consensus 151 ------------~~~~~~---~~~~---~---~~~~~~~~~~~~~~v~--------vvG~G~~--g~e~a~~l~~~g--- 196 (338)
T 3itj_A 151 ------------ETYWQK---GISA---C---AVCDGAVPIFRNKPLA--------VIGGGDS--ACEEAQFLTKYG--- 196 (338)
T ss_dssp ------------HHHBTT---TEES---C---HHHHTTSGGGTTSEEE--------EECSSHH--HHHHHHHHTTTS---
T ss_pred ------------hhccCc---cEEE---c---hhcccchhhcCCCEEE--------EECCCHH--HHHHHHHHHhcC---
Confidence 111100 0100 0 0000000111222222 2333322 222233444444
Q ss_pred CcEEEEEeCCCcCCCchhHHHHHHHHHHh-CCceEEcCCceEEEeCCCCE---EEEEeCC--CceEEeecEEEECCCCCc
Q psy8791 250 AAKLTYCTGMGVLFPSPFYAEKIHDILIG-RGVDVHKGKALVEIDLANKE---AVFKSED--KTERLPYAIMHVTPPMGP 323 (706)
Q Consensus 250 ~~~v~l~~~~~~~~~~~~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~~---v~~~~~~--~g~~i~~D~vI~a~G~~~ 323 (706)
.+|+++++.+.+++. ..+.+.+.+ .||++++++.+.+++.+++. +.+.... +++++++|.||+|+|++|
T Consensus 197 -~~v~~v~~~~~~~~~----~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 271 (338)
T 3itj_A 197 -SKVFMLVRKDHLRAS----TIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTP 271 (338)
T ss_dssp -SEEEEECSSSSCCSC----HHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEE
T ss_pred -CEEEEEEcCCccCCC----HHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCC
Confidence 369999999887652 344555555 49999999999999877653 4444321 256899999999999999
Q ss_pred hhhhhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCC
Q psy8791 324 VPELATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNR 390 (706)
Q Consensus 324 ~~~~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~ 390 (706)
+..+.+.++ .+++|++.|++.+++ |+.|||||+|||+..+ ++.+..|..||+.+|.||.+.+.++
T Consensus 272 ~~~~~~~~l~~~~~G~i~v~~~~~~-t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~~ 337 (338)
T 3itj_A 272 ATKIVAGQVDTDEAGYIKTVPGSSL-TSVPGFFAAGDVQDSK-YRQAITSAGSGCMAALDAEKYLTSL 337 (338)
T ss_dssp CCGGGBTTBCBCTTSCBCCCTTSSB-CSSTTEEECGGGGCSS-CCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ChhHhhCceEecCCCcEEEcCcccc-cCCCCEEEeeccCCCC-ccceeeehhhhHHHHHHHHHHHhcC
Confidence 966665577 688999996442565 8999999999999853 5678899999999999999999875
No 29
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.96 E-value=2.1e-28 Score=255.71 Aligned_cols=291 Identities=15% Similarity=0.117 Sum_probs=192.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEE-EcCCCC---cccCcccccccCc--cccCccccccccccc-CCCcEE
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSI-VEPTDD---HYYQPMFTLIGGG--MKKLSDSRRPMKSVL-PSGATW 100 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtl-ie~~~~---~~~~p~~~~~~~~--~~~~~~~~~~~~~~~-~~~v~~ 100 (706)
+.+++|+|||||+|||+||..|++. +++|+| ||+... ..+.+.....++. ......+...+.+.. +.++++
T Consensus 2 ~~~~~vvIIG~G~aGl~aA~~l~~~--g~~v~li~e~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 79 (315)
T 3r9u_A 2 NAMLDVAIIGGGPAGLSAGLYATRG--GLKNVVMFEKGMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKH 79 (315)
T ss_dssp CSCEEEEEECCSHHHHHHHHHHHHH--TCSCEEEECSSSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEE
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC--CCCeEEEEeCCCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEE
Confidence 3467999999999999999999999 899999 999432 0111111111111 111122333333333 368999
Q ss_pred EEceeEEEEcCC--CEEE--eCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCcccccccc
Q psy8791 101 VKDKIVSFDPEN--NRVR--TQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLR 176 (706)
Q Consensus 101 i~~~v~~id~~~--~~v~--~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (706)
+.++|+++ ++. +.+. +..+.++.||+||+|||+.+..|.+||.+ .|..+.++.
T Consensus 80 ~~~~v~~i-~~~~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~g~~--------------------~~~~~~~~~-- 136 (315)
T 3r9u_A 80 EMVGVEQI-LKNSDGSFTIKLEGGKTELAKAVIVCTGSAPKKAGFKGED--------------------EFFGKGVST-- 136 (315)
T ss_dssp ECCCEEEE-EECTTSCEEEEETTSCEEEEEEEEECCCEEECCCCCBTTT--------------------TTBTTTEES--
T ss_pred EEEEEEEE-ecCCCCcEEEEEecCCEEEeCEEEEeeCCCCCCCCCCChh--------------------hcCCCeEEe--
Confidence 88999999 444 3333 43322899999999999999888888832 011111110
Q ss_pred CccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEE
Q psy8791 177 RPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYC 256 (706)
Q Consensus 177 ~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~ 256 (706)
..... . ....+ +.++ .+++++. +......+.+.+ .+|+++
T Consensus 137 ---------------------~~~~~----~-~~~~~-~~v~-------viG~g~~--~~e~a~~l~~~g----~~v~~~ 176 (315)
T 3r9u_A 137 ---------------------CATCD----G-FFYKN-KEVA-------VLGGGDT--ALEEALYLANIC----SKIYLI 176 (315)
T ss_dssp ---------------------CHHHH----G-GGGTT-SEEE-------EECCBHH--HHHHHHHHHTTS----SEEEEE
T ss_pred ---------------------eeccc----c-cccCc-CEEE-------EECCCHH--HHHHHHHHHhhC----CEEEEE
Confidence 00000 0 01112 2222 2333322 222233455454 359999
Q ss_pred eCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCE---EEEEeCCCce--EEeecEEEECCCCCchhhhhcC-
Q psy8791 257 TGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKE---AVFKSEDKTE--RLPYAIMHVTPPMGPVPELATS- 330 (706)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~---v~~~~~~~g~--~i~~D~vI~a~G~~~~~~~~~~- 330 (706)
++.+.+...+ ..+++.+++.||++++++.+.+++.+++. +++. ..+|+ ++++|.||+|+|.+|+..+.+.
T Consensus 177 ~~~~~~~~~~---~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~-~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~ 252 (315)
T 3r9u_A 177 HRRDEFRAAP---STVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVK-LKDGSIRDLNVPGIFTFVGLNVRNEILKQD 252 (315)
T ss_dssp CSSSSCBSCH---HHHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEE-CTTSCEEEECCSCEEECSCEEECCGGGBCT
T ss_pred EeCCCCCCCH---HHHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEE-cCCCCeEEeecCeEEEEEcCCCCchhhhcc
Confidence 9988774433 34456667899999999999999876643 3333 33564 8999999999999999655443
Q ss_pred ----CC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCC
Q psy8791 331 ----RL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNR 390 (706)
Q Consensus 331 ----~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~ 390 (706)
++ .+++|++.||+ +++ |+.|||||+|||+..+ ++++..|..||+.+|.||.+.+.++
T Consensus 253 ~~~g~l~~~~~g~i~vd~-~~~-t~~~~v~a~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~~ 314 (315)
T 3r9u_A 253 DSKFLCNMEEGGQVSVDL-KMQ-TSVAGLFAAGDLRKDA-PKQVICAAGDGAVAALSAMAYIESL 314 (315)
T ss_dssp TSCBSSCBCTTSCBCCCT-TCB-CSSTTEEECGGGBTTC-CCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccceeeecCCCcEEeCC-Ccc-cCCCCEEEeecccCCc-hhhhhhHHhhHHHHHHHHHHHHHhc
Confidence 37 67889999999 788 7999999999999753 6788999999999999999998765
No 30
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.96 E-value=1.6e-28 Score=254.30 Aligned_cols=283 Identities=17% Similarity=0.191 Sum_probs=195.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCccc-ccccC-ccccCccccccccccc-CC-CcEEEEcee
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMF-TLIGG-GMKKLSDSRRPMKSVL-PS-GATWVKDKI 105 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~-~~~~~-~~~~~~~~~~~~~~~~-~~-~v~~i~~~v 105 (706)
+++|+|||||+||++||..|++. +++|+|||+++.....+.. ..++. .......+...+.+.+ .. +++++.++|
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v 79 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRA--RKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEGRV 79 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEESCE
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEeEE
Confidence 36899999999999999999999 8999999998643322211 11111 1122223333333333 33 789999999
Q ss_pred EEEEcCCC--EEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhh
Q psy8791 106 VSFDPENN--RVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQE 183 (706)
Q Consensus 106 ~~id~~~~--~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 183 (706)
++++++.+ .|.+.++.++.||+||+|||+.+..|.+||.+ .
T Consensus 80 ~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~~~~g~~-------------------------------------~ 122 (297)
T 3fbs_A 80 TDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDELPEIAGLR-------------------------------------E 122 (297)
T ss_dssp EEEEEETTEEEEEETTSCEEEEEEEEECCCCEEECCCCBTTG-------------------------------------G
T ss_pred EEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCCCCCCch-------------------------------------h
Confidence 99998764 67778888899999999999999888889832 1
Q ss_pred hhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCC
Q psy8791 184 ALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLF 263 (706)
Q Consensus 184 ~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~ 263 (706)
.... .+... . +.....+.+.++++ +++++. +......+.+.+ +|+++++.+..
T Consensus 123 ~~~~---~~~~~---~-----~~~~~~~~~~~v~v--------vG~G~~--~~e~a~~l~~~g-----~v~~v~~~~~~- 175 (297)
T 3fbs_A 123 RWGS---AVFHC---P-----YCHGYELDQGKIGV--------IAASPM--AIHHALMLPDWG-----ETTFFTNGIVE- 175 (297)
T ss_dssp GBTT---TEESC---H-----HHHTGGGTTCEEEE--------ECCSTT--HHHHHHHGGGTS-----EEEEECTTTCC-
T ss_pred hcCC---eeEEc---c-----cCcchhhcCCEEEE--------EecCcc--HHHHHHHhhhcC-----cEEEEECCCCC-
Confidence 0000 01000 0 00001122222222 223321 112222344443 59999877652
Q ss_pred CchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch-hhhhcCCC-CC--CCC-c
Q psy8791 264 PSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV-PELATSRL-VD--QSG-Y 338 (706)
Q Consensus 264 ~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~-~~~~~~~l-~~--~~G-~ 338 (706)
+.+.+.+.|++.||+++. +.|.+++.++ .+.+ ++|+++++|.||+|+|++|+ +++.+.++ .+ ++| +
T Consensus 176 ----~~~~~~~~l~~~gv~i~~-~~v~~i~~~~-~v~~---~~g~~~~~D~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~ 246 (297)
T 3fbs_A 176 ----PDADQHALLAARGVRVET-TRIREIAGHA-DVVL---ADGRSIALAGLFTQPKLRITVDWIEKLGCAVEEGPMGST 246 (297)
T ss_dssp ----CCHHHHHHHHHTTCEEEC-SCEEEEETTE-EEEE---TTSCEEEESEEEECCEEECCCSCHHHHTCCEEEETTEEE
T ss_pred ----CCHHHHHHHHHCCcEEEc-ceeeeeecCC-eEEe---CCCCEEEEEEEEEccCcccCchhHHhcCCccccCCCCce
Confidence 345678889999999996 8999998764 3444 47889999999999999998 56666677 33 457 8
Q ss_pred eeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCCC
Q psy8791 339 VNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNRA 391 (706)
Q Consensus 339 i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~~ 391 (706)
+.||+ +++ |+.|||||+|||+.. |+++..|..||+.+|.||.+.+.+.+
T Consensus 247 i~vd~-~~~-t~~~~vya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~l~~~~ 295 (297)
T 3fbs_A 247 IVTDP-MKQ-TTARGIFACGDVARP--AGSVALAVGDGAMAGAAAHRSILFPE 295 (297)
T ss_dssp ECCCT-TCB-CSSTTEEECSGGGCT--TCCHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred EEeCC-CCc-cCCCCEEEEeecCCc--hHHHHHHHHhHHHHHHHHHHHHhhhh
Confidence 99999 677 899999999999997 56889999999999999999998764
No 31
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.96 E-value=9.1e-29 Score=257.18 Aligned_cols=290 Identities=12% Similarity=0.122 Sum_probs=191.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-cccccccCc-cccCccc-ccccccccC-CCcEEEEc
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-PMFTLIGGG-MKKLSDS-RRPMKSVLP-SGATWVKD 103 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-p~~~~~~~~-~~~~~~~-~~~~~~~~~-~~v~~i~~ 103 (706)
...+||+|||||+||++||.+|+|+ +++|+|||++...... ...+.+... ...+..+ .....++.+ ..+.+...
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~--g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRA--RKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEK 81 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEEC
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEee
Confidence 4457999999999999999999998 8999999997531110 001111100 0111111 111233334 35677777
Q ss_pred eeEEEEcCC---CEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccc
Q psy8791 104 KIVSFDPEN---NRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSG 180 (706)
Q Consensus 104 ~v~~id~~~---~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (706)
++..++... .++.+.+|+++.||+||||||+.+..|++||.
T Consensus 82 ~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~p~i~G~------------------------------------ 125 (304)
T 4fk1_A 82 TVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEFPSIPNV------------------------------------ 125 (304)
T ss_dssp CEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEECCSCTTH------------------------------------
T ss_pred EEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCccccccccCc------------------------------------
Confidence 777766433 36888889999999999999999999999992
Q ss_pred hhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCC
Q psy8791 181 LQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMG 260 (706)
Q Consensus 181 l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~ 260 (706)
...... .+.. ..... . ..+.+.+. +.++|++.. +..+...+++.+. +++++++.+
T Consensus 126 -~~~~~~---~v~~---~~~~~----~-~~~~~~~~--------~VIggG~~~-~~e~a~~~~~~~~----~v~i~~~~~ 180 (304)
T 4fk1_A 126 -REYYGK---SLFS---CPYCD----G-WELKDQPL--------IIISENEDH-TLHMTKLVYNWST----DLVIATNGN 180 (304)
T ss_dssp -HHHBTT---TEES---CHHHH----S-GGGTTSCE--------EEECCSHHH-HHHHHHHHTTTCS----CEEEECSSC
T ss_pred -cccccc---eeee---ccccc----h-hHhcCCce--------eeecCCCch-hhhHHHHHHhCCc----eEEEEeccc
Confidence 211110 1111 00000 0 01222222 223444322 2233344554443 378887765
Q ss_pred cCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch-hhhhcCCC-CCCCCc
Q psy8791 261 VLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV-PELATSRL-VDQSGY 338 (706)
Q Consensus 261 ~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~-~~~~~~~l-~~~~G~ 338 (706)
.+ ...+.+.|++.|++++.+. +..+..+++.+..+.+++|+++++|.+|+++|..|+ +++.+.++ ++++|+
T Consensus 181 ~~------~~~~~~~l~~~g~~~~~~~-v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~g~~~~~~G~ 253 (304)
T 4fk1_A 181 EL------SQTIMDELSNKNIPVITES-IRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGT 253 (304)
T ss_dssp CC------CHHHHHHHHTTTCCEECSC-EEEEESGGGCCCEEEETTSCEECCCEEEECCEEECSSCHHHHTTCCCCTTSS
T ss_pred cc------hhhhhhhhhccceeEeeee-EEEeecCCCeeeeeeccccceeeecceeeeeccccCChhhhhcCeEECCCCC
Confidence 43 3456778899999999874 778877665555455668999999988888766555 77888888 789999
Q ss_pred eeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCC
Q psy8791 339 VNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNR 390 (706)
Q Consensus 339 i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~ 390 (706)
|.||+ ++| |+.|||||+|||+..+ ++++..|..||+.||.+|.++|.++
T Consensus 254 I~vd~-~~~-Ts~p~IyA~GDv~~~~-~~~~~~A~~~G~~AA~~i~~~L~~e 302 (304)
T 4fk1_A 254 FVIDD-FGR-TSEKNIYLAGETTTQG-PSSLIIAASQGNKAAIAINSDITDE 302 (304)
T ss_dssp SCSST-TCB-CSSTTEEECSHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECc-CCc-cCCCCEEEEeccCCCc-chHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999 687 9999999999999754 3567789999999999999988643
No 32
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.96 E-value=8.1e-28 Score=252.57 Aligned_cols=290 Identities=17% Similarity=0.147 Sum_probs=192.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcc----cccccCc--cccCccccccccccc-CCCcEEEE
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPM----FTLIGGG--MKKLSDSRRPMKSVL-PSGATWVK 102 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~----~~~~~~~--~~~~~~~~~~~~~~~-~~~v~~i~ 102 (706)
+++|+|||||+||++||..|++. +++|+|||++.. ..... ....++. ......+...+.+.. +.+++++.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~ 84 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRA--QLSTLILEKGMP-GGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM 84 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCT-TGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHc--CCcEEEEeCCCC-CcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe
Confidence 57999999999999999999998 899999999832 11100 0001100 001111222222222 36889988
Q ss_pred ceeEEEEcC--C---CEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccC
Q psy8791 103 DKIVSFDPE--N---NRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRR 177 (706)
Q Consensus 103 ~~v~~id~~--~---~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (706)
++|++++.+ . ..|.+.+|.++.||+||+|||+.+..+.+||.+ + |..+
T Consensus 85 ~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~i~g~~--~------------------~~~~------- 137 (325)
T 2q7v_A 85 DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKLGIPGED--N------------------FWGK------- 137 (325)
T ss_dssp CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECCCCCTTTT--T------------------TBTT-------
T ss_pred eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChh--h------------------ccCc-------
Confidence 999999876 4 367777888899999999999998888888831 0 0000
Q ss_pred ccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEe
Q psy8791 178 PSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCT 257 (706)
Q Consensus 178 ~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~ 257 (706)
.+.. + .... . ....+.+++ .++++.. +......+.+.+ .+|++++
T Consensus 138 -------------~~~~-~--~~~~----~-~~~~~~~v~--------VvG~G~~--g~e~A~~l~~~g----~~Vtlv~ 182 (325)
T 2q7v_A 138 -------------GVST-C--ATCD----G-FFYKGKKVV--------VIGGGDA--AVEEGMFLTKFA----DEVTVIH 182 (325)
T ss_dssp -------------TEES-C--HHHH----G-GGGTTCEEE--------EECCSHH--HHHHHHHHTTTC----SEEEEEC
T ss_pred -------------eEEE-e--ccCC----H-HHcCCCEEE--------EECCCHH--HHHHHHHHHhcC----CEEEEEe
Confidence 0100 0 0000 0 011222222 2333322 222223454444 3699999
Q ss_pred CCCcCCCchhHHHHHHHHHH-hCCceEEcCCceEEEeCCCC--EEEEEeCCCce--EEeecEEEECCCCCch-hhhhcCC
Q psy8791 258 GMGVLFPSPFYAEKIHDILI-GRGVDVHKGKALVEIDLANK--EAVFKSEDKTE--RLPYAIMHVTPPMGPV-PELATSR 331 (706)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~l~-~~gV~v~~~~~v~~i~~~~~--~v~~~~~~~g~--~i~~D~vI~a~G~~~~-~~~~~~~ 331 (706)
+.+.+...+. +.+.+. +.||++++++++.++..+++ .+.+....+|+ ++++|.||+|+|++|+ +++...
T Consensus 183 ~~~~~~~~~~----~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~- 257 (325)
T 2q7v_A 183 RRDTLRANKV----AQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDT- 257 (325)
T ss_dssp SSSSCCSCHH----HHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT-
T ss_pred CCCcCCcchH----HHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHHhhh-
Confidence 8887654332 333444 47999999999999987643 34554323454 7999999999999999 555555
Q ss_pred C-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCCCC
Q psy8791 332 L-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNRAL 392 (706)
Q Consensus 332 l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~~~ 392 (706)
+ .+++|++.||+ +++ |+.|||||+|||+..+ ++++..|..||+.+|.||.+.+.++++
T Consensus 258 ~~~~~~g~i~vd~-~~~-t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~~~~ 316 (325)
T 2q7v_A 258 VSLRDDGYVDVRD-EIY-TNIPMLFAAGDVSDYI-YRQLATSVGAGTRAAMMTERQLAALEV 316 (325)
T ss_dssp SCBCTTSCBCCBT-TTB-CSSTTEEECSTTTCSS-CCCHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred cccCCCccEecCC-CCc-cCCCCEEEeecccCcc-HHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 5 57789999999 687 8999999999999864 568899999999999999999988754
No 33
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.96 E-value=7.5e-28 Score=252.15 Aligned_cols=290 Identities=18% Similarity=0.161 Sum_probs=192.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC---cccccccC-ccccCccccccccc-ccCCCcEEEEc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ---PMFTLIGG-GMKKLSDSRRPMKS-VLPSGATWVKD 103 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~---p~~~~~~~-~~~~~~~~~~~~~~-~~~~~v~~i~~ 103 (706)
..++|+|||||+||++||..|++. +++|+|||+....... +.....++ .......+...+.+ +.+.+++++.+
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 92 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARS--GFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREGV 92 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEETC
T ss_pred CCCcEEEECcCHHHHHHHHHHHhC--CCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEEe
Confidence 357999999999999999999998 8999999995421100 00001111 00011111111222 22367888888
Q ss_pred eeEEEEcCCC--EEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccch
Q psy8791 104 KIVSFDPENN--RVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGL 181 (706)
Q Consensus 104 ~v~~id~~~~--~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 181 (706)
+|++++.+.+ .|.+ ++.++.||+||+|+|+.+..+.+||.+ + +..+
T Consensus 93 ~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~~~i~g~~--~------------------~~~~----------- 140 (319)
T 3cty_A 93 EVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHKHLGVKGES--E------------------YFGK----------- 140 (319)
T ss_dssp CEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEECCCCCBTTT--T------------------TBTT-----------
T ss_pred eEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcccCCCCChH--H------------------hCCc-----------
Confidence 9999987666 4555 556899999999999998888888721 0 0000
Q ss_pred hhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCc
Q psy8791 182 QEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGV 261 (706)
Q Consensus 182 ~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~ 261 (706)
.+.. ..... . ....+.+++ .++|++. +......+.+.+ .+|+++++.+.
T Consensus 141 ---------~~~~---~~~~~----~-~~~~~~~v~--------viG~G~~--g~e~a~~l~~~g----~~V~~i~~~~~ 189 (319)
T 3cty_A 141 ---------GTSY---CSTCD----G-YLFKGKRVV--------TIGGGNS--GAIAAISMSEYV----KNVTIIEYMPK 189 (319)
T ss_dssp ---------TEES---CHHHH----G-GGGBTSEEE--------EECCSHH--HHHHHHHHTTTB----SEEEEECSSSS
T ss_pred ---------eEEE---EEecc----h-hhcCCCeEE--------EECCCHH--HHHHHHHHHhhC----CcEEEEEcCCc
Confidence 0100 00000 0 011222222 2333322 122223344444 36999998877
Q ss_pred CCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCC---EEEEEeCCCce--EEeecEEEECCCCCch-hhhhcCCC-CC
Q psy8791 262 LFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANK---EAVFKSEDKTE--RLPYAIMHVTPPMGPV-PELATSRL-VD 334 (706)
Q Consensus 262 ~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~---~v~~~~~~~g~--~i~~D~vI~a~G~~~~-~~~~~~~l-~~ 334 (706)
+...+ .+.+.+++.||++++++++.++..+++ .+.+....+|+ ++++|.||+|+|++|+ +++.+.++ .+
T Consensus 190 ~~~~~----~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~~~ 265 (319)
T 3cty_A 190 YMCEN----AYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLD 265 (319)
T ss_dssp CCSCH----HHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSCCCBC
T ss_pred cCCCH----HHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhcccccc
Confidence 65433 345566789999999999999987654 34444323454 7999999999999999 56666777 67
Q ss_pred CCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCC
Q psy8791 335 QSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNR 390 (706)
Q Consensus 335 ~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~ 390 (706)
++|++.||+ +++ |+.|||||+|||+..+ ++++..|..||+.+|.||.+.+.|+
T Consensus 266 ~~g~i~vd~-~~~-t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~~ 318 (319)
T 3cty_A 266 ERGYIVVDS-RQR-TSVPGVYAAGDVTSGN-FAQIASAVGDGCKAALSLYSDSISK 318 (319)
T ss_dssp TTSCBCCCT-TCB-CSSTTEEECSTTBTTC-CCCHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CCccEeCCC-CCc-cCCCCEEEeecccCcc-hhhHHHHHHHHHHHHHHHHHHhhcc
Confidence 889999999 677 8999999999999864 4678899999999999999999875
No 34
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.96 E-value=2.6e-28 Score=255.64 Aligned_cols=295 Identities=18% Similarity=0.196 Sum_probs=198.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcc---cCcccccccCc--cccCccccccccccc-CCCcEEEEc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHY---YQPMFTLIGGG--MKKLSDSRRPMKSVL-PSGATWVKD 103 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~---~~p~~~~~~~~--~~~~~~~~~~~~~~~-~~~v~~i~~ 103 (706)
.++|+|||||+||++||..|++. +++|+|||+..... +.......+.. ......+...+.... ..+++++.+
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARA--NLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFD 82 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT--TCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHHC--CCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEe
Confidence 46899999999999999999998 89999999753210 00000000000 001111111122222 368899888
Q ss_pred eeEEEEcCCCEEE-eCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchh
Q psy8791 104 KIVSFDPENNRVR-TQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQ 182 (706)
Q Consensus 104 ~v~~id~~~~~v~-~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 182 (706)
+|+.++.+.+.+. +.++.++.||+||+|||+.+..+.+||. .
T Consensus 83 ~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~~~~~~g~-------------------------------------~ 125 (320)
T 1trb_A 83 HINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPSE-------------------------------------E 125 (320)
T ss_dssp CEEEEECSSSSEEEEESSCEEEEEEEEECCCEEECCCCCHHH-------------------------------------H
T ss_pred eeeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcCCCCCCCh-------------------------------------H
Confidence 8999998776544 5667789999999999999888878772 1
Q ss_pred hhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcC
Q psy8791 183 EALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVL 262 (706)
Q Consensus 183 ~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~ 262 (706)
.... . .+.... ... .. ...++.+ +.++++.. +......+.+.+ .+|+++++.+.+
T Consensus 126 ~~~~-~--~~~~~~---~~~---~~---~~~~~~v-------~ViG~G~~--g~e~A~~l~~~g----~~Vtlv~~~~~~ 180 (320)
T 1trb_A 126 AFKG-R--GVSACA---TSD---GF---FYRNQKV-------AVIGGGNT--AVEEALYLSNIA----SEVHLIHRRDGF 180 (320)
T ss_dssp HTBT-T--TEESCH---HHH---GG---GGTTSEE-------EEECSSHH--HHHHHHHHTTTS----SEEEEECSSSSC
T ss_pred HhCC-c--eeEecc---cCC---cc---ccCCCeE-------EEECCCHH--HHHHHHHHHhcC----CeEEEEEeCCcc
Confidence 1000 0 111100 000 00 1112222 22344432 222223344444 369999998887
Q ss_pred CCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCE---EEEEeC---CCceEEeecEEEECCCCCchhhhhcCCC-CCC
Q psy8791 263 FPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKE---AVFKSE---DKTERLPYAIMHVTPPMGPVPELATSRL-VDQ 335 (706)
Q Consensus 263 ~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~---v~~~~~---~~g~~i~~D~vI~a~G~~~~~~~~~~~l-~~~ 335 (706)
...+.+.+.+.+.+++.||+++++++|.+++.+++. +.+... .+++++++|.||+|+|++|+..+.+.++ .+
T Consensus 181 ~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~~~l~~~- 259 (320)
T 1trb_A 181 RAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELE- 259 (320)
T ss_dssp CCCHHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGGTTTSCEE-
T ss_pred ccCHHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHhccccccc-
Confidence 767788888999999999999999999999876533 444321 1236899999999999999965555566 56
Q ss_pred CCceeeCcccc----ccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCCC
Q psy8791 336 SGYVNVDKATL----QHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNRA 391 (706)
Q Consensus 336 ~G~i~vd~~~l----~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~~ 391 (706)
+|++.||+ ++ +.|+.|||||+|||+..+ ++.+..|..||+.+|.||.+.+.+++
T Consensus 260 ~G~i~vd~-~~~~~~~~t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~~~ 317 (320)
T 1trb_A 260 NGYIKVQS-GIHGNATQTSIPGVFAAGDVMDHI-YRQAITSAGTGCMAALDAERYLDGLA 317 (320)
T ss_dssp TTEECCCC-SSSSCTTBCSSTTEEECGGGGCSS-SCCHHHHHHHHHHHHHHHHHHHTC--
T ss_pred CceEEECC-CcccccccCCCCCEEEcccccCCc-chhhhhhhccHHHHHHHHHHHHHhcc
Confidence 89999999 55 468999999999999875 46788999999999999999998764
No 35
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.96 E-value=1.5e-27 Score=266.42 Aligned_cols=284 Identities=17% Similarity=0.167 Sum_probs=199.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-------cccccc-----------------cCcccc-
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-------PMFTLI-----------------GGGMKK- 82 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~~~~~-----------------~~~~~~- 82 (706)
..++||||||||+||++||.+|++. +++|+|||+++..... |..... ......
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~ 118 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAM--GGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEK 118 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhh
Confidence 4457999999999999999999998 8999999999842211 110000 000000
Q ss_pred ---Ccccccc----cc---cc------cCCCcEEE-EceeEEEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCc
Q psy8791 83 ---LSDSRRP----MK---SV------LPSGATWV-KDKIVSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPS 145 (706)
Q Consensus 83 ---~~~~~~~----~~---~~------~~~~v~~i-~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~ 145 (706)
.+.+... +. .+ ...+++++ .++++.+++ ++|.+. +.++.||+||+|||+.+..|++||.+
T Consensus 119 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~~v~~~-g~~~~~d~lViATGs~p~~p~i~G~~ 195 (523)
T 1mo9_A 119 VVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN--HTVEAA-GKVFKAKNLILAVGAGPGTLDVPGVN 195 (523)
T ss_dssp CCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET--TEEEET-TEEEEBSCEEECCCEECCCCCSTTTT
T ss_pred hhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC--CEEEEC-CEEEEeCEEEECCCCCCCCCCCCCcc
Confidence 0111111 11 22 34689998 889999986 567776 67899999999999999988888831
Q ss_pred ccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCe
Q psy8791 146 ALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPI 225 (706)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v 225 (706)
. . .+ ++.+.+ .+.+....+.++ +
T Consensus 196 -------------------------------------~----~--~v---~~~~~~---~~~l~~~~g~~v--------v 218 (523)
T 1mo9_A 196 -------------------------------------A----K--GV---FDHATL---VEELDYEPGSTV--------V 218 (523)
T ss_dssp -------------------------------------S----B--TE---EEHHHH---HHHCCSCCCSEE--------E
T ss_pred -------------------------------------c----C--cE---eeHHHH---HHHHHhcCCCeE--------E
Confidence 0 0 01 111111 111222221222 2
Q ss_pred eeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCC-CE---E
Q psy8791 226 KCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLAN-KE---A 299 (706)
Q Consensus 226 ~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~-~~---v 299 (706)
.++|+.. +......+.+.|. +|+++++.+.+++ ++.+.+.+.+.|++.||+++++++|.+++.++ +. +
T Consensus 219 ViGgG~~--g~E~A~~l~~~G~----~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~ 292 (523)
T 1mo9_A 219 VVGGSKT--AVEYGCFFNATGR----RTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAV 292 (523)
T ss_dssp EECCSHH--HHHHHHHHHHTTC----EEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEE
T ss_pred EECCCHH--HHHHHHHHHHcCC----eEEEEEecCcccccccHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEE
Confidence 2334322 2233345666664 5999999998887 78899999999999999999999999998643 32 3
Q ss_pred EEEeCCCce-EEeecEEEECCCCCchh--hhhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHh
Q psy8791 300 VFKSEDKTE-RLPYAIMHVTPPMGPVP--ELATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQ 375 (706)
Q Consensus 300 ~~~~~~~g~-~i~~D~vI~a~G~~~~~--~~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~q 375 (706)
.+ .+++|+ ++++|.||+|+|.+|+. .+.+.++ .+++|+|.||+ ++| |+.|+|||+|||+..+ +++..|..|
T Consensus 293 ~v-~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~~~~G~i~Vd~-~~~-t~~~~IyA~GD~~~~~--~~~~~A~~~ 367 (523)
T 1mo9_A 293 VA-MTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNE-YLQ-TSVPNVYAVGDLIGGP--MEMFKARKS 367 (523)
T ss_dssp EE-EETTEEEEEECSCEEECCCCEECCHHHHHHHTCCBCTTSCBCCCT-TSB-CSSTTEEECGGGGCSS--CSHHHHHHH
T ss_pred EE-EECCCcEEEEcCEEEECcCCccCCccCHHHcCCccCCCCCEEECC-CCc-cCCCCEEEEeecCCCc--ccHHHHHHH
Confidence 33 345777 89999999999999996 5777788 67889999999 688 7999999999999864 578899999
Q ss_pred HHHHHHHHH
Q psy8791 376 CKVVYDNLS 384 (706)
Q Consensus 376 g~~~a~ni~ 384 (706)
|+++|+||.
T Consensus 368 g~~aa~~i~ 376 (523)
T 1mo9_A 368 GCYAARNVM 376 (523)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHc
Confidence 999999995
No 36
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.96 E-value=1.3e-27 Score=249.41 Aligned_cols=288 Identities=16% Similarity=0.154 Sum_probs=192.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCC-eEEEEcCCCCccc---CcccccccC--ccccCcccccccccc-cCCCcEEEEc
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKG-QVSIVEPTDDHYY---QPMFTLIGG--GMKKLSDSRRPMKSV-LPSGATWVKD 103 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~-~Vtlie~~~~~~~---~p~~~~~~~--~~~~~~~~~~~~~~~-~~~~v~~i~~ 103 (706)
++|+|||||+||++||..|++. ++ +|+|||++..... .+.....++ .......+...+.+. .+.+++++.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~--g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~ 79 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG--GVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMT 79 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEECS
T ss_pred ceEEEECccHHHHHHHHHHHHC--CCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEEE
Confidence 6899999999999999999998 88 9999999642110 000001110 001111122222222 2368898889
Q ss_pred eeEEEEcCCC--EEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccch
Q psy8791 104 KIVSFDPENN--RVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGL 181 (706)
Q Consensus 104 ~v~~id~~~~--~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 181 (706)
+|++++.+.+ .+.+.+|.++.||+||+|||+.+..|.+||.
T Consensus 80 ~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~~~g~------------------------------------- 122 (311)
T 2q0l_A 80 AVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGE------------------------------------- 122 (311)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECCCCCBTH-------------------------------------
T ss_pred EEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCCCCCCCh-------------------------------------
Confidence 9999998777 6767788889999999999999888888882
Q ss_pred hhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCc
Q psy8791 182 QEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGV 261 (706)
Q Consensus 182 ~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~ 261 (706)
...... .+... .... .. ...+.+++ .++++.. +......+.+.+ .+|+++++.+.
T Consensus 123 ~~~~~~---~~~~~---~~~~----~~-~~~~~~v~--------VvG~G~~--g~e~A~~l~~~g----~~Vtlv~~~~~ 177 (311)
T 2q0l_A 123 SEYWGK---GVSTC---ATCD----GF-FYKNKEVA--------VLGGGDT--AVEEAIYLANIC----KKVYLIHRRDG 177 (311)
T ss_dssp HHHBTT---TEESC---HHHH----GG-GGTTSEEE--------EECCSHH--HHHHHHHHHTTS----SEEEEECSSSS
T ss_pred hhccCC---cEEEe---ecCC----hh-hcCCCEEE--------EECCCHH--HHHHHHHHHhcC----CEEEEEeeCCc
Confidence 111100 11110 0000 00 11222222 2333322 222223455555 35999998887
Q ss_pred CCCchhHHHHHHHHHH-hCCceEEcCCceEEEeCCCCE---EEEEeCCCce--EEeecEEEECCCCCch-hhhhcCC---
Q psy8791 262 LFPSPFYAEKIHDILI-GRGVDVHKGKALVEIDLANKE---AVFKSEDKTE--RLPYAIMHVTPPMGPV-PELATSR--- 331 (706)
Q Consensus 262 ~~~~~~~~~~~~~~l~-~~gV~v~~~~~v~~i~~~~~~---v~~~~~~~g~--~i~~D~vI~a~G~~~~-~~~~~~~--- 331 (706)
+...+. +.+.+. +.||++++++.+.+++.+++. +.+....+|+ ++++|.||+|+|++|+ +++...+
T Consensus 178 ~~~~~~----~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~ 253 (311)
T 2q0l_A 178 FRCAPI----TLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSM 253 (311)
T ss_dssp CCSCHH----HHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSCB
T ss_pred cCCCHH----HHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccChhhhhcccccc
Confidence 653333 444554 479999999999999875333 4444323454 7999999999999999 5666664
Q ss_pred -C-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcC
Q psy8791 332 -L-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKN 389 (706)
Q Consensus 332 -l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g 389 (706)
+ .+++|++.||+ +++ |+.|||||+|||+..+ ++++..|..||+.+|.||.+.+.+
T Consensus 254 ~l~~~~~g~i~vd~-~~~-t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~ 310 (311)
T 2q0l_A 254 LCKCDEYGSIVVDF-SMK-TNVQGLFAAGDIRIFA-PKQVVCAASDGATAALSVISYLEH 310 (311)
T ss_dssp SSCBCTTSCBCCCT-TCB-CSSTTEEECSTTBTTC-CCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred eeEeccCCCEEeCC-ccc-cCCCCeEEcccccCcc-hHHHHHHHHhHHHHHHHHHHHHhh
Confidence 6 67789999999 688 8999999999999863 568899999999999999998865
No 37
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.96 E-value=6.8e-28 Score=265.97 Aligned_cols=295 Identities=15% Similarity=0.139 Sum_probs=200.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-------cccccc--------------cCcc-------c
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-------PMFTLI--------------GGGM-------K 81 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~~~~~--------------~~~~-------~ 81 (706)
++||+|||||+||++||.+|++. +++|+|||+++..... |..... ..+. .
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 79 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL--GMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTM 79 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCcc
Confidence 47999999999999999999998 8999999999754221 110000 0000 0
Q ss_pred cCcccc-----------ccccccc-CCCcEEEEceeEEEEcCCCEEEeCCC--eEEEecEEEEccccccccCCCCCCccc
Q psy8791 82 KLSDSR-----------RPMKSVL-PSGATWVKDKIVSFDPENNRVRTQAG--SEISYEYMIVASGIQMYYDRVKGPSAL 147 (706)
Q Consensus 82 ~~~~~~-----------~~~~~~~-~~~v~~i~~~v~~id~~~~~v~~~~g--~~~~yd~lviAtG~~~~~~~~~g~~~~ 147 (706)
+...+. ..+..++ ..+++++.+++..+++....|.+.+| .++.||+||+|||+.+..|+++|.+
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~~~g~~-- 157 (468)
T 2qae_A 80 DSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFD-- 157 (468)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCBTTBCCC--
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCCCCCCCCC--
Confidence 000000 0011222 25899999888888876556666677 7899999999999999888888721
Q ss_pred ccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeee
Q psy8791 148 INALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKC 227 (706)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~ 227 (706)
. . .+ ++.+.+.. +... ..+ .+.+
T Consensus 158 -----------------------------------~----~--~v---~t~~~~~~----~~~~-~~~--------vvVi 180 (468)
T 2qae_A 158 -----------------------------------E----K--VV---LSSTGALA----LPRV-PKT--------MVVI 180 (468)
T ss_dssp -----------------------------------S----S--SE---ECHHHHHT----CSSC-CSE--------EEEE
T ss_pred -----------------------------------c----C--ce---echHHHhh----cccC-Cce--------EEEE
Confidence 0 0 01 11111110 0011 111 1223
Q ss_pred CChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHH-HhCCceEEcCCceEEEeCCCCEEEEEeC
Q psy8791 228 GGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDIL-IGRGVDVHKGKALVEIDLANKEAVFKSE 304 (706)
Q Consensus 228 ~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l-~~~gV~v~~~~~v~~i~~~~~~v~~~~~ 304 (706)
+|+.. +......+.+.|. +|+++++.+.+++ ++++.+.+.+.| ++.||+++++++|.+++.+++.+.+...
T Consensus 181 GgG~~--g~E~A~~l~~~g~----~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~ 254 (468)
T 2qae_A 181 GGGVI--GLELGSVWARLGA----EVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVE 254 (468)
T ss_dssp CCSHH--HHHHHHHHHHTTC----EEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEE
T ss_pred CCCHH--HHHHHHHHHHhCC----EEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEE
Confidence 44422 2223345666664 5999999998886 688899999999 9999999999999999876543333221
Q ss_pred -CCc--eEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHH
Q psy8791 305 -DKT--ERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCK 377 (706)
Q Consensus 305 -~~g--~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~ 377 (706)
.+| +++++|.||+|+|.+|+.. +.+.++ .+++|+|.||+ ++| |+.|||||+|||+.. .++++..|..||+
T Consensus 255 ~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~-~~~-t~~~~IyA~GD~~~~-~~~~~~~A~~~g~ 331 (468)
T 2qae_A 255 GKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGD-HFE-TSIPDVYAIGDVVDK-GPMLAHKAEDEGV 331 (468)
T ss_dssp CC---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCT-TSB-CSSTTEEECGGGBSS-SCSCHHHHHHHHH
T ss_pred cCCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECC-Ccc-cCCCCEEEeeccCCC-CCccHhHHHHHHH
Confidence 145 6899999999999999954 456677 67789999999 688 899999999999983 2458889999999
Q ss_pred HHHHHHHHHHcCCCCCCcccc
Q psy8791 378 VVYDNLSAVMKNRALPHEYNG 398 (706)
Q Consensus 378 ~~a~ni~~~l~g~~~~~~~~~ 398 (706)
.+|+||. |++.++.|..
T Consensus 332 ~aa~~i~----~~~~~~~~~~ 348 (468)
T 2qae_A 332 ACAEILA----GKPGHVNYGV 348 (468)
T ss_dssp HHHHHHT----TCCCCCCTTS
T ss_pred HHHHHHc----CCCccCCCCC
Confidence 9999995 4443444443
No 38
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.96 E-value=7.7e-28 Score=265.99 Aligned_cols=297 Identities=14% Similarity=0.141 Sum_probs=203.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-------cccc--------------cc-cCcc------c
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-------PMFT--------------LI-GGGM------K 81 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~~~--------------~~-~~~~------~ 81 (706)
++||+|||||+||++||.+|++. +++|+|||+++..... |... .. ..+. .
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~--g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~ 83 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQL--GFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRL 83 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCcc
Confidence 47999999999999999999998 8999999999753211 1000 00 0000 0
Q ss_pred cCcccc-----------ccccccc-CCCcEEEEceeEEEEcCCCEEEeCC-C-eEEEecEEEEccccccccCCCCCCccc
Q psy8791 82 KLSDSR-----------RPMKSVL-PSGATWVKDKIVSFDPENNRVRTQA-G-SEISYEYMIVASGIQMYYDRVKGPSAL 147 (706)
Q Consensus 82 ~~~~~~-----------~~~~~~~-~~~v~~i~~~v~~id~~~~~v~~~~-g-~~~~yd~lviAtG~~~~~~~~~g~~~~ 147 (706)
+...+. ..+...+ ..+++++.+++..+|+....|.+.+ + .++.||+||+|||+.+..|+++|.+
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~i~g~~-- 161 (474)
T 1zmd_A 84 NLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITID-- 161 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECCCTTCCCC--
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCCCCCCC--
Confidence 000000 0011222 3689999998888886555666666 4 5799999999999999888888831
Q ss_pred ccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeee
Q psy8791 148 INALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKC 227 (706)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~ 227 (706)
+ . .+ ++.+.+.. +... ..++ +.+
T Consensus 162 ~---------------------~--------------------~v---~t~~~~~~----~~~~-~~~v--------vVi 184 (474)
T 1zmd_A 162 E---------------------D--------------------TI---VSSTGALS----LKKV-PEKM--------VVI 184 (474)
T ss_dssp S---------------------S--------------------SE---ECHHHHTT----CSSC-CSEE--------EEE
T ss_pred c---------------------C--------------------cE---EcHHHHhh----cccc-CceE--------EEE
Confidence 0 0 00 11111100 0011 1111 223
Q ss_pred CChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC---chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCE-EEEEe
Q psy8791 228 GGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP---SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKE-AVFKS 303 (706)
Q Consensus 228 ~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~---~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~-v~~~~ 303 (706)
+|+.. +......+.+.|. +|+++++.+.+++ ++++.+.+++.|++.||+++++++|.+++.+++. +.+..
T Consensus 185 GgG~~--g~E~A~~l~~~g~----~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~ 258 (474)
T 1zmd_A 185 GAGVI--GVELGSVWQRLGA----DVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSI 258 (474)
T ss_dssp CCSHH--HHHHHHHHHHTTC----EEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEE
T ss_pred CCCHH--HHHHHHHHHHcCC----EEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEE
Confidence 44432 2223345666664 5999999998876 6889999999999999999999999999876543 43321
Q ss_pred ----CCCceEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHh
Q psy8791 304 ----EDKTERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQ 375 (706)
Q Consensus 304 ----~~~g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~q 375 (706)
.++++++++|.||+|+|.+|+.. +.+.++ .+++|+|.||+ ++| |+.|+|||+|||+.. ++++..|..|
T Consensus 259 ~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~-~~~-t~~~~IyA~GD~~~~--~~~~~~A~~~ 334 (474)
T 1zmd_A 259 EAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNT-RFQ-TKIPNIYAIGDVVAG--PMLAHKAEDE 334 (474)
T ss_dssp EETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCT-TCB-CSSTTEEECGGGSSS--CCCHHHHHHH
T ss_pred EecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECc-CCc-cCCCCEEEeeecCCC--CccHHHHHHH
Confidence 34678899999999999999953 566677 67789999999 688 899999999999986 4578899999
Q ss_pred HHHHHHHHHHHHcCCCCCCcccceee
Q psy8791 376 CKVVYDNLSAVMKNRALPHEYNGYTS 401 (706)
Q Consensus 376 g~~~a~ni~~~l~g~~~~~~~~~~~~ 401 (706)
|+++|+||. |++.++.|.....
T Consensus 335 g~~aa~~i~----~~~~~~~~~~~p~ 356 (474)
T 1zmd_A 335 GIICVEGMA----GGAVHIDYNCVPS 356 (474)
T ss_dssp HHHHHHHHT----TCCCCCCGGGCCE
T ss_pred HHHHHHHhc----CCCCcCCCCCCCE
Confidence 999999995 4443444544333
No 39
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.96 E-value=2e-28 Score=269.90 Aligned_cols=282 Identities=18% Similarity=0.193 Sum_probs=196.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCccc----c---------------ccc--CccccCcccc-
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMF----T---------------LIG--GGMKKLSDSR- 87 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~----~---------------~~~--~~~~~~~~~~- 87 (706)
++||+|||||+||++||..|++. +.+|+|||+++.....+.. | ... ....+...+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~--G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~ 81 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKA--KYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQD 81 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhC--CCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHH
Confidence 47999999999999999999998 8999999987753322110 0 000 0000000000
Q ss_pred -----------ccccccc-CCCcEEEEceeEEEEcCCCEEEeCCCeE--EEecEEEEccccccccCCCCCCccccccccc
Q psy8791 88 -----------RPMKSVL-PSGATWVKDKIVSFDPENNRVRTQAGSE--ISYEYMIVASGIQMYYDRVKGPSALINALGH 153 (706)
Q Consensus 88 -----------~~~~~~~-~~~v~~i~~~v~~id~~~~~v~~~~g~~--~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~ 153 (706)
..+..++ ..+++++.+++..+|++...|.+.+|++ +.||+||+|||+.+..|++||.+ +
T Consensus 82 ~~~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~---~---- 154 (466)
T 3l8k_A 82 RKDYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAKLRLPGVE---Y---- 154 (466)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCCCCTTGG---G----
T ss_pred HHHhheeccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCccCCCCCCcc---c----
Confidence 1122233 3689999999999998877788888878 99999999999999999999921 0
Q ss_pred ccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHH
Q psy8791 154 CDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMK 233 (706)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~ 233 (706)
+++.+.+....+.+... ++. .+.++|+..
T Consensus 155 -----------------------------------------~~t~~~~~~~~~~l~~~--~~~-------vvViGgG~~- 183 (466)
T 3l8k_A 155 -----------------------------------------CLTSDDIFGYKTSFRKL--PQD-------MVIIGAGYI- 183 (466)
T ss_dssp -----------------------------------------SBCHHHHHSTTCSCCSC--CSE-------EEEECCSHH-
T ss_pred -----------------------------------------eEeHHHHHHHHHHHhhC--CCe-------EEEECCCHH-
Confidence 01111111000000011 111 122344432
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC---chhHHHHHHHHHHhCCceEEcCCceEEEeCCC-CEEEEEeCC-Cce
Q psy8791 234 AVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP---SPFYAEKIHDILIGRGVDVHKGKALVEIDLAN-KEAVFKSED-KTE 308 (706)
Q Consensus 234 ~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~---~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~-~~v~~~~~~-~g~ 308 (706)
+......+.+.|. +|+++++.+++++ ++.+.+.+++.++ |+++++++|.+++.++ +.+.+...+ +|+
T Consensus 184 -g~e~A~~l~~~g~----~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~ 255 (466)
T 3l8k_A 184 -GLEIASIFRLMGV----QTHIIEMLDRALITLEDQDIVNTLLSILK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGS 255 (466)
T ss_dssp -HHHHHHHHHHTTC----EEEEECSSSSSCTTSCCHHHHHHHHHHHC---CCEECSCCEEEEEEEETTEEEEEECCTTSC
T ss_pred -HHHHHHHHHHcCC----EEEEEEeCCcCCCCCCCHHHHHHHHhcCE---EEEEECCEEEEEEEcCCCcEEEEEEecCCc
Confidence 2233345666664 5999999998875 5677777777776 9999999999998754 455443332 455
Q ss_pred --EEeecEEEECCCCCchhh--hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHH
Q psy8791 309 --RLPYAIMHVTPPMGPVPE--LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNL 383 (706)
Q Consensus 309 --~i~~D~vI~a~G~~~~~~--~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni 383 (706)
++++|.||+|+|.+|+.. +.+.++ .+++| |.||+ ++| |+.|||||+|||+.. ++++..|..||+++|+||
T Consensus 256 ~~~i~~D~vi~a~G~~p~~~l~l~~~gl~~~~~G-i~vd~-~~~-t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i 330 (466)
T 3l8k_A 256 KKSIFTNSVVLAAGRRPVIPEGAREIGLSISKTG-IVVDE-TMK-TNIPNVFATGDANGL--APYYHAAVRMSIAAANNI 330 (466)
T ss_dssp CEEEEESCEEECCCEEECCCTTTGGGTCCBCSSS-BCCCT-TCB-CSSTTEEECGGGTCS--CCSHHHHHHHHHHHHHHH
T ss_pred eEEEEcCEEEECcCCCcccccchhhcCceeCCCC-EeECC-Ccc-CCCCCEEEEEecCCC--CccHhHHHHHHHHHHHHH
Confidence 899999999999999965 567788 78889 99998 788 799999999999987 568899999999999999
Q ss_pred H
Q psy8791 384 S 384 (706)
Q Consensus 384 ~ 384 (706)
.
T Consensus 331 ~ 331 (466)
T 3l8k_A 331 M 331 (466)
T ss_dssp H
T ss_pred h
Confidence 6
No 40
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.96 E-value=5.4e-27 Score=258.71 Aligned_cols=282 Identities=17% Similarity=0.217 Sum_probs=198.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC----------------------cccccc---cCc--cc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ----------------------PMFTLI---GGG--MK 81 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~----------------------p~~~~~---~~~--~~ 81 (706)
.++||+|||||+||++||.+|++. +++|+|||+++. ... +..++. ... ..
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~--g~~V~lie~~~~-GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 79 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQ--GAQVTLIERGTI-GGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTI 79 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSST-THHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCCC-CccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCcc
Confidence 357999999999999999999998 899999999842 100 001111 000 00
Q ss_pred cCccccc------------cccccc-CC-CcEEEEceeEEEEcCCCEEEeCCC--eEEEecEEEEccccccccCCCCCCc
Q psy8791 82 KLSDSRR------------PMKSVL-PS-GATWVKDKIVSFDPENNRVRTQAG--SEISYEYMIVASGIQMYYDRVKGPS 145 (706)
Q Consensus 82 ~~~~~~~------------~~~~~~-~~-~v~~i~~~v~~id~~~~~v~~~~g--~~~~yd~lviAtG~~~~~~~~~g~~ 145 (706)
....+.. .+.+++ .. +++++.+++..+++....|.+.+| .++.||+||+|||+.+..|++||.+
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~i~G~~ 159 (467)
T 1zk7_A 80 DRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIPGLK 159 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEEECCCCCTTTT
T ss_pred CHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCCCCCCCCCC
Confidence 0000000 012222 34 899999999999977666777777 6899999999999999989899831
Q ss_pred ccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCe
Q psy8791 146 ALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPI 225 (706)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v 225 (706)
.. . .++.+.+.. +... ++.+ +
T Consensus 160 -------------------------------------~~------~---~~~~~~~~~----~~~~--~~~v-------v 180 (467)
T 1zk7_A 160 -------------------------------------ES------P---YWTSTEALA----SDTI--PERL-------A 180 (467)
T ss_dssp -------------------------------------TS------C---CBCHHHHHH----CSSC--CSEE-------E
T ss_pred -------------------------------------cC------c---eecHHHHhc----cccc--CCEE-------E
Confidence 00 0 112211111 1111 1111 2
Q ss_pred eeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC-chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeC
Q psy8791 226 KCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP-SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSE 304 (706)
Q Consensus 226 ~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~-~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~ 304 (706)
.++|+.. +......+.+.|. +|+++++.+.+++ ++.+.+.+.+.+++.||+++++++|.+++.+++.+.+. +
T Consensus 181 ViGgG~~--g~E~A~~l~~~g~----~Vtlv~~~~~~l~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~-~ 253 (467)
T 1zk7_A 181 VIGSSVV--ALELAQAFARLGS----KVTVLARNTLFFREDPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLT-T 253 (467)
T ss_dssp EECCSHH--HHHHHHHHHHTTC----EEEEECSSCTTTTSCHHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEE-E
T ss_pred EECCCHH--HHHHHHHHHHcCC----EEEEEEECCccCCCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEE-E
Confidence 2344432 2223344666664 5999999998886 78899999999999999999999999998665543332 3
Q ss_pred CCceEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHH
Q psy8791 305 DKTERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVY 380 (706)
Q Consensus 305 ~~g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a 380 (706)
++.++++|.||+|+|.+|+.. +.+.++ .+++|+|.||+ +++ |+.|+|||+|||+..+ ..+..|..||+.+|
T Consensus 254 -~~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~-~~~-t~~~~iya~GD~~~~~--~~~~~A~~~g~~aa 328 (467)
T 1zk7_A 254 -THGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQ-GMR-TSNPNIYAAGDCTDQP--QFVYVAAAAGTRAA 328 (467)
T ss_dssp -TTEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCT-TCB-CSSTTEEECSTTBSSC--CCHHHHHHHHHHHH
T ss_pred -CCcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECC-Ccc-cCCCCEEEEeccCCCc--ccHHHHHHHHHHHH
Confidence 356899999999999999943 456677 67789999999 687 8999999999999864 47889999999999
Q ss_pred HHHH
Q psy8791 381 DNLS 384 (706)
Q Consensus 381 ~ni~ 384 (706)
.||.
T Consensus 329 ~~i~ 332 (467)
T 1zk7_A 329 INMT 332 (467)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 9995
No 41
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.96 E-value=8.7e-28 Score=252.92 Aligned_cols=291 Identities=16% Similarity=0.128 Sum_probs=199.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-----cccc--cccCc-cccCcccccccccccC-CCcEE
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-----PMFT--LIGGG-MKKLSDSRRPMKSVLP-SGATW 100 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-----p~~~--~~~~~-~~~~~~~~~~~~~~~~-~~v~~ 100 (706)
.++|+|||||+||++||..|++. +++|+|||+++..... |... ..++. ......+...+.+... .++++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMR--QASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTI 84 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEE
T ss_pred cceEEEECCCHHHHHHHHHHHHC--CCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcE
Confidence 46999999999999999999998 8999999999853311 1110 01100 0011222233333333 57888
Q ss_pred EE-ceeEEEEcCCC---EEEeCCCeEEEecEEEEcccc---ccccCCCCCCcccccccccccccccccccCccCCccccc
Q psy8791 101 VK-DKIVSFDPENN---RVRTQAGSEISYEYMIVASGI---QMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLD 173 (706)
Q Consensus 101 i~-~~v~~id~~~~---~v~~~~g~~~~yd~lviAtG~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (706)
.. .+|++++.+.+ .|.+.+++ +.||+||+|||+ .+..+.+||.+ .|..+.++
T Consensus 85 ~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~~~~g~~--------------------~~~g~~~~ 143 (332)
T 3lzw_A 85 CLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPRKLELENAE--------------------QYEGKNLH 143 (332)
T ss_dssp ECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEECCCCCTTGG--------------------GGBTTTEE
T ss_pred EccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCCCCCCCChh--------------------hccCceEE
Confidence 75 89999998876 77888775 999999999999 78888888832 00111100
Q ss_pred cccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEE
Q psy8791 174 FLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKL 253 (706)
Q Consensus 174 ~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v 253 (706)
. ...+. ..+.+.+++ .++++.. +......+.+.+ .+|
T Consensus 144 ~-------------------~~~~~----------~~~~~~~v~--------vvG~g~~--~~e~a~~l~~~~----~~v 180 (332)
T 3lzw_A 144 Y-------------------FVDDL----------QKFAGRRVA--------ILGGGDS--AVDWALMLEPIA----KEV 180 (332)
T ss_dssp S-------------------SCSCG----------GGGBTCEEE--------EECSSHH--HHHHHHHHTTTB----SEE
T ss_pred E-------------------ecCCH----------HHcCCCEEE--------EECCCHh--HHHHHHHHHhhC----CeE
Confidence 0 00000 011222222 2333322 222223344443 369
Q ss_pred EEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCC--EEEEEeCC--CceEEeecEEEECCCCCch-hhhh
Q psy8791 254 TYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANK--EAVFKSED--KTERLPYAIMHVTPPMGPV-PELA 328 (706)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~--~v~~~~~~--~g~~i~~D~vI~a~G~~~~-~~~~ 328 (706)
+++++.+.+.+.+. ..+.|++.||++++++.+.+++.+++ .+++.... +++++++|.||+|+|++|+ +++.
T Consensus 181 ~~~~~~~~~~~~~~----~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~ 256 (332)
T 3lzw_A 181 SIIHRRDKFRAHEH----SVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIK 256 (332)
T ss_dssp EEECSSSSCSSCHH----HHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGG
T ss_pred EEEEecCcCCccHH----HHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCCCchHHh
Confidence 99999888765322 23457889999999999999987654 35554322 2568999999999999998 6677
Q ss_pred cCCCCCCCCceeeCccccccCCCCCEEEccccCCCC-CCchHHHHHHhHHHHHHHHHHHHcCCCC
Q psy8791 329 TSRLVDQSGYVNVDKATLQHVKYSNVFAIGDCSNLP-TSKTAAAVAGQCKVVYDNLSAVMKNRAL 392 (706)
Q Consensus 329 ~~~l~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~-~~~~~~~a~~qg~~~a~ni~~~l~g~~~ 392 (706)
.+++..++|++.||+ +++ |+.|||||+|||+..+ .++++..|..||+.+|.||.+.+.++..
T Consensus 257 ~~~~~~~~g~i~vd~-~~~-t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~ 319 (332)
T 3lzw_A 257 NWGLDIEKNSIVVKS-TME-TNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKAYMDPKAR 319 (332)
T ss_dssp GSSCCEETTEEECCT-TSB-CSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred hcCccccCCeEEeCC-CCc-eecCCEEEccceecCCCCcceEeeehhhHHHHHHHHHHhhChhhc
Confidence 778844789999999 788 7999999999999764 4778999999999999999999988754
No 42
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.96 E-value=1.6e-27 Score=264.02 Aligned_cols=279 Identities=15% Similarity=0.188 Sum_probs=192.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHh-hcCCCeEEEEcC--------CCCcccCccc----cc---------------c-cCcc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTS-KLGKGQVSIVEP--------TDDHYYQPMF----TL---------------I-GGGM 80 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~-~~~~~~Vtlie~--------~~~~~~~p~~----~~---------------~-~~~~ 80 (706)
++||+|||||+||++||.+|++ . +++|+|||+ .+.....+.. |. . ..+.
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~--G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~ 84 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLY--GKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGW 84 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHH--CCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred ccCEEEECCChhHHHHHHHHHHhc--CCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCc
Confidence 5799999999999999999999 8 899999992 2221111000 00 0 0000
Q ss_pred --------ccCccccc-----------ccccc-cCC-CcEEEEceeEEEEcCCCEEEeC---C-----CeEEEecEEEEc
Q psy8791 81 --------KKLSDSRR-----------PMKSV-LPS-GATWVKDKIVSFDPENNRVRTQ---A-----GSEISYEYMIVA 131 (706)
Q Consensus 81 --------~~~~~~~~-----------~~~~~-~~~-~v~~i~~~v~~id~~~~~v~~~---~-----g~~~~yd~lviA 131 (706)
.+...+.. .+... ... +++++.++++.++. ++|.++ + ++++.||+||+|
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~--~~v~v~~~~~~~~~~~~~~~~d~lViA 162 (495)
T 2wpf_A 85 EFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESK--NVVVVRETADPKSAVKERLQADHILLA 162 (495)
T ss_dssp ECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEET--TEEEEESSSSTTSCEEEEEEEEEEEEC
T ss_pred ccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeC--CEEEEeecCCccCCCCeEEEcCEEEEe
Confidence 00000000 01111 235 89999999988874 567775 4 678999999999
Q ss_pred cccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhc
Q psy8791 132 SGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHF 211 (706)
Q Consensus 132 tG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 211 (706)
||+.+..|++||.+ +... ..+.+.. ...
T Consensus 163 TGs~p~~p~i~G~~---~~~~----------------------------~~~~~~~---------------------~~~ 190 (495)
T 2wpf_A 163 TGSWPQMPAIPGIE---HCIS----------------------------SNEAFYL---------------------PEP 190 (495)
T ss_dssp CCEEECCCCCTTGG---GCEE----------------------------HHHHTTC---------------------SSC
T ss_pred CCCCcCCCCCCCcc---cccc----------------------------HHHHHhh---------------------hhc
Confidence 99999988899821 0000 1111110 011
Q ss_pred cCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHc---CCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcC
Q psy8791 212 QSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKH---KKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKG 286 (706)
Q Consensus 212 ~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~---g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~ 286 (706)
..++ +.++|+.. ..++ ...+.+. | .+|+++++.+.+++ ++++.+.+.+.|++.||+++++
T Consensus 191 -~~~v--------vViGgG~i-g~E~-A~~l~~~~~~g----~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~ 255 (495)
T 2wpf_A 191 -PRRV--------LTVGGGFI-SVEF-AGIFNAYKPPG----GKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTN 255 (495)
T ss_dssp -CSEE--------EEECSSHH-HHHH-HHHHHHHCCTT----CEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEES
T ss_pred -CCeE--------EEECCCHH-HHHH-HHHHHhhCCCC----CeEEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEeC
Confidence 1111 22344422 1222 2344555 4 36999999998886 6889999999999999999999
Q ss_pred CceEEEeCCCC-EEEEEeCCCceEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccC
Q psy8791 287 KALVEIDLANK-EAVFKSEDKTERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCS 361 (706)
Q Consensus 287 ~~v~~i~~~~~-~v~~~~~~~g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~ 361 (706)
++|.+++.+++ .+.+ .+++|+++++|.||+|+|.+|+.. +.++++ .+++|+|.||+ ++| |+.|||||+|||+
T Consensus 256 ~~v~~i~~~~~~~~~v-~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd~-~~~-t~~~~IyA~GD~~ 332 (495)
T 2wpf_A 256 ENPAKVSLNTDGSKHV-TFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDE-FSR-TNVPNIYAIGDIT 332 (495)
T ss_dssp CCEEEEEECTTSCEEE-EETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCCT-TCB-CSSTTEEECGGGG
T ss_pred CEEEEEEEcCCceEEE-EECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEECC-CCc-cCCCCEEEEeccC
Confidence 99999986542 2333 334788999999999999999953 466788 67789999999 688 8999999999999
Q ss_pred CCCCCchHHHHHHhHHHHHHHHH
Q psy8791 362 NLPTSKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 362 ~~~~~~~~~~a~~qg~~~a~ni~ 384 (706)
.. ++++..|..||+++|+||.
T Consensus 333 ~~--~~l~~~A~~~g~~aa~~i~ 353 (495)
T 2wpf_A 333 DR--LMLTPVAINEGAALVDTVF 353 (495)
T ss_dssp CS--CCCHHHHHHHHHHHHHHHH
T ss_pred CC--ccCHHHHHHHHHHHHHHhc
Confidence 75 4588899999999999995
No 43
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.95 E-value=3.1e-27 Score=259.00 Aligned_cols=277 Identities=13% Similarity=0.181 Sum_probs=194.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-------cccc---------cc--cC---cc------cc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-------PMFT---------LI--GG---GM------KK 82 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~~~---------~~--~~---~~------~~ 82 (706)
++||+|||||+||++||.+|++. +.+|+|||+++. ... |... .+ .. +. .+
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~--g~~V~liE~~~~-GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~ 80 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMY--GQKCALIEAKEL-GGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFN 80 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT--TCCEEEEESSCT-THHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC--CCeEEEEcCCCC-CCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccC
Confidence 57999999999999999999998 899999999853 111 1000 00 00 00 00
Q ss_pred Ccccc-----------ccccc-ccCCCcEEEEceeEEEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccc
Q psy8791 83 LSDSR-----------RPMKS-VLPSGATWVKDKIVSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINA 150 (706)
Q Consensus 83 ~~~~~-----------~~~~~-~~~~~v~~i~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~ 150 (706)
...+. ..+.. +...+++++.++++.+++ ++|.+ +|.++.||+||+|||+.+..|++||.+ +.
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~--~~v~~-~g~~~~~d~lviAtGs~p~~p~i~g~~---~~ 154 (450)
T 1ges_A 81 WETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDA--KTLEV-NGETITADHILIATGGRPSHPDIPGVE---YG 154 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEET--TEEEE-TTEEEEEEEEEECCCEEECCCCSTTGG---GS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecC--CEEEE-CCEEEEeCEEEECCCCCCCCCCCCCcc---ce
Confidence 00000 00111 123689999999888875 56777 677899999999999999988888821 00
Q ss_pred cccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCCh
Q psy8791 151 LGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGA 230 (706)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~ 230 (706)
.+.+.+.. +... ++.+ +.++|+
T Consensus 155 ---------------------------------------------~~~~~~~~----~~~~--~~~v-------vViGgG 176 (450)
T 1ges_A 155 ---------------------------------------------IDSDGFFA----LPAL--PERV-------AVVGAG 176 (450)
T ss_dssp ---------------------------------------------BCHHHHHH----CSSC--CSEE-------EEECCS
T ss_pred ---------------------------------------------ecHHHhhh----hhhc--CCeE-------EEECCC
Confidence 11111111 1111 1111 223444
Q ss_pred hHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCE-EEEEeCCCc
Q psy8791 231 PMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKE-AVFKSEDKT 307 (706)
Q Consensus 231 ~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~-v~~~~~~~g 307 (706)
.. +......+.+.|. +|+++++.+.+++ ++.+.+.+.+.|++.||+++++++|.+++.+++. +.+ .+++|
T Consensus 177 ~~--g~e~A~~l~~~g~----~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v-~~~~g 249 (450)
T 1ges_A 177 YI--GVELGGVINGLGA----KTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTL-ELEDG 249 (450)
T ss_dssp HH--HHHHHHHHHHTTC----EEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEE-EETTS
T ss_pred HH--HHHHHHHHHhcCC----EEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEE-EECCC
Confidence 22 2233345666664 5999999988876 6788999999999999999999999999865322 333 23478
Q ss_pred eEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHH
Q psy8791 308 ERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNL 383 (706)
Q Consensus 308 ~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni 383 (706)
+++++|.||+|+|.+|+.. +.+.++ .+++|+|.||+ ++| |+.|||||+|||+.. ++++..|..||+.+|+||
T Consensus 250 ~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~-~~~-t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i 325 (450)
T 1ges_A 250 RSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDK-YQN-TNIEGIYAVGDNTGA--VELTPVAVAAGRRLSERL 325 (450)
T ss_dssp CEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCT-TSB-CSSTTEEECSGGGTS--CCCHHHHHHHHHHHHHHH
T ss_pred cEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECC-CCc-cCCCCEEEEeccCCC--CccHHHHHHHHHHHHHHH
Confidence 8999999999999999953 456688 67799999999 687 899999999999875 457889999999999999
Q ss_pred H
Q psy8791 384 S 384 (706)
Q Consensus 384 ~ 384 (706)
.
T Consensus 326 ~ 326 (450)
T 1ges_A 326 F 326 (450)
T ss_dssp H
T ss_pred c
Confidence 5
No 44
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.95 E-value=2e-27 Score=253.39 Aligned_cols=296 Identities=15% Similarity=0.107 Sum_probs=198.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-----ccc--ccccCc-cccCcccccccccc-cCCCcE
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-----PMF--TLIGGG-MKKLSDSRRPMKSV-LPSGAT 99 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-----p~~--~~~~~~-~~~~~~~~~~~~~~-~~~~v~ 99 (706)
..+||+|||||+||++||..|++. +++|+|||+++..... |.. ...++. ......+...+.+. ...+++
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 90 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMN--NISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPD 90 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC--CCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCE
Confidence 357999999999999999999998 8999999998764221 110 000000 00111111122222 235777
Q ss_pred EEE-ceeEEEEcCCC---EEEeCCCeEEEecEEEEccccc---cccCCCCC-CcccccccccccccccccccCccCCccc
Q psy8791 100 WVK-DKIVSFDPENN---RVRTQAGSEISYEYMIVASGIQ---MYYDRVKG-PSALINALGHCDLVRSFVTFPLFFPRRT 171 (706)
Q Consensus 100 ~i~-~~v~~id~~~~---~v~~~~g~~~~yd~lviAtG~~---~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (706)
+.. .+|+.++.+.+ .|.+.+|.++.||+||+|||+. +..+.+|| .+ + +..+
T Consensus 91 ~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~--~------------------~~~~- 149 (360)
T 3ab1_A 91 VVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNID--H------------------LTGS- 149 (360)
T ss_dssp EECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCT--T------------------TBTT-
T ss_pred EEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchh--h------------------CcCc-
Confidence 765 58999997654 6777888889999999999984 44444454 21 0 0000
Q ss_pred cccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCc
Q psy8791 172 LDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAA 251 (706)
Q Consensus 172 ~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~ 251 (706)
.+...+. . +..+.+.++++ ++|+.. +......+.+.+ .
T Consensus 150 -------------------~v~~~~~--~-------~~~~~~~~vvV--------vG~G~~--g~e~A~~l~~~g----~ 187 (360)
T 3ab1_A 150 -------------------SVYYAVK--S-------VEDFKGKRVVI--------VGGGDS--ALDWTVGLIKNA----A 187 (360)
T ss_dssp -------------------TEESSCS--C-------GGGGTTCEEEE--------ECSSHH--HHHHHHHTTTTS----S
T ss_pred -------------------eEEEecC--C-------HHHcCCCcEEE--------ECCCHH--HHHHHHHHHhcC----C
Confidence 0100000 0 00112222222 333321 122222344343 3
Q ss_pred EEEEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCE---EEEEeCCCc--eEEeecEEEECCCCCch-h
Q psy8791 252 KLTYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKE---AVFKSEDKT--ERLPYAIMHVTPPMGPV-P 325 (706)
Q Consensus 252 ~v~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~---v~~~~~~~g--~~i~~D~vI~a~G~~~~-~ 325 (706)
+|+++++.+.+.+.+.+.+.+.+.+++.||+++++++|.+++.+++. +.+. ..+| +++++|.||+|+|++|+ +
T Consensus 188 ~V~lv~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~-~~~g~~~~i~~D~vi~a~G~~p~~~ 266 (360)
T 3ab1_A 188 SVTLVHRGHEFQGHGKTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLR-SSDGSKWTVEADRLLILIGFKSNLG 266 (360)
T ss_dssp EEEEECSSSSCSSCSHHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEE-ETTCCEEEEECSEEEECCCBCCSCG
T ss_pred EEEEEEcCCCCCCCHHHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEE-ecCCCeEEEeCCEEEECCCCCCCHH
Confidence 69999999888776677788888899999999999999999876443 3333 2255 68999999999999999 5
Q ss_pred hhhcCCCCCCCCceeeCccccccCCCCCEEEccccCCCC-CCchHHHHHHhHHHHHHHHHHHHcCCCC
Q psy8791 326 ELATSRLVDQSGYVNVDKATLQHVKYSNVFAIGDCSNLP-TSKTAAAVAGQCKVVYDNLSAVMKNRAL 392 (706)
Q Consensus 326 ~~~~~~l~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~-~~~~~~~a~~qg~~~a~ni~~~l~g~~~ 392 (706)
++...++..++|++.||+ +++ |+.|+|||+|||+..+ .++++..|..||+++|+||...+.+.+.
T Consensus 267 ~l~~~~~~~~~g~i~vd~-~~~-t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~ 332 (360)
T 3ab1_A 267 PLARWDLELYENALVVDS-HMK-TSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLSYIKPGEK 332 (360)
T ss_dssp GGGGSSCCEETTEEECCT-TSB-CSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHHHHHHSCC--
T ss_pred HHHhhccccccCeeeecC-CCc-CCCCCEEEecCccCCCCccceeehhHHHHHHHHHHHHhhcCCccc
Confidence 777777733379999999 788 7999999999999865 3678899999999999999999988765
No 45
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.95 E-value=3.8e-27 Score=259.02 Aligned_cols=293 Identities=19% Similarity=0.192 Sum_probs=200.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-------ccccc------------cc-Ccc------ccC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-------PMFTL------------IG-GGM------KKL 83 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~~~~------------~~-~~~------~~~ 83 (706)
++||+|||||+||++||.+|++. +++|+|||++.. ... |.... .. .+. .+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~--g~~V~lie~~~~-gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 79 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQL--GQKVTIVEKGNL-GGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDF 79 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCT-THHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC--CCeEEEEECCCC-CCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 47999999999999999999998 899999999832 111 10000 00 000 000
Q ss_pred cccc-----------cccccc-cCCCcEEEEceeEEEEcCCCEEEeCCC-eEEEecEEEEccccccccCCCCCCcccccc
Q psy8791 84 SDSR-----------RPMKSV-LPSGATWVKDKIVSFDPENNRVRTQAG-SEISYEYMIVASGIQMYYDRVKGPSALINA 150 (706)
Q Consensus 84 ~~~~-----------~~~~~~-~~~~v~~i~~~v~~id~~~~~v~~~~g-~~~~yd~lviAtG~~~~~~~~~g~~~~~~~ 150 (706)
..+. ..+... ...+++++.+++..++++...|.+.+| .++.||+||+|||+.+..|+++|.+
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~i~~d~lViATGs~p~~~~~~g~~----- 154 (455)
T 1ebd_A 80 AKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAIIATGSRPIELPNFKFS----- 154 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTEEEEEECSEEEECCCEEECCBTTBCCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCcEEEEeCEEEEecCCCCCCCCCCCcc-----
Confidence 0000 001122 236899999888778765556666667 6799999999999999888877721
Q ss_pred cccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCCh
Q psy8791 151 LGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGA 230 (706)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~ 230 (706)
. . +++...+.. +.. .++.+ +.++|+
T Consensus 155 --------------------------------~-------~---v~~~~~~~~----~~~--~~~~v-------vViGgG 179 (455)
T 1ebd_A 155 --------------------------------N-------R---ILDSTGALN----LGE--VPKSL-------VVIGGG 179 (455)
T ss_dssp --------------------------------S-------S---EECHHHHHT----CSS--CCSEE-------EEECCS
T ss_pred --------------------------------c-------e---EecHHHHhc----ccc--CCCeE-------EEECCC
Confidence 0 0 011111110 001 11111 223444
Q ss_pred hHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEE--eCCC
Q psy8791 231 PMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFK--SEDK 306 (706)
Q Consensus 231 ~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~--~~~~ 306 (706)
+. +......+.+.|. +|+++++.+.+++ ++.+.+.+.+.|++.||+++++++|.+++.+++.+.+. ..++
T Consensus 180 ~~--g~e~A~~l~~~g~----~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~ 253 (455)
T 1ebd_A 180 YI--GIELGTAYANFGT----KVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGE 253 (455)
T ss_dssp HH--HHHHHHHHHHTTC----EEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTE
T ss_pred HH--HHHHHHHHHHcCC----cEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCc
Confidence 32 2233345666664 5999999988876 68889999999999999999999999998655444332 2225
Q ss_pred ceEEeecEEEECCCCCchh-h--hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHH
Q psy8791 307 TERLPYAIMHVTPPMGPVP-E--LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDN 382 (706)
Q Consensus 307 g~~i~~D~vI~a~G~~~~~-~--~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~n 382 (706)
++++++|.||+|+|.+|+. + +.+.++ .+++|+|.||+ ++| |+.|+|||+|||+.. ++++..|..||+.+|+|
T Consensus 254 ~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~-~~~-t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~ 329 (455)
T 1ebd_A 254 TKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQ-QCR-TSVPNIFAIGDIVPG--PALAHKASYEGKVAAEA 329 (455)
T ss_dssp EEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCT-TCB-CSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHH
T ss_pred eeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCC-Ccc-cCCCCEEEEeccCCC--cccHHHHHHHHHHHHHH
Confidence 6789999999999999995 4 456677 67789999999 688 899999999999986 45788999999999999
Q ss_pred HHHHHcCCCCCCcccce
Q psy8791 383 LSAVMKNRALPHEYNGY 399 (706)
Q Consensus 383 i~~~l~g~~~~~~~~~~ 399 (706)
|. |++.++.|...
T Consensus 330 i~----~~~~~~~~~~~ 342 (455)
T 1ebd_A 330 IA----GHPSAVDYVAI 342 (455)
T ss_dssp HT----SCCCCCCCSCC
T ss_pred Hc----CCCccCCCCCC
Confidence 95 44444445443
No 46
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=9.4e-28 Score=265.28 Aligned_cols=281 Identities=13% Similarity=0.126 Sum_probs=195.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-------cc--c-------ccc---c-Ccc--------
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-------PM--F-------TLI---G-GGM-------- 80 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~--~-------~~~---~-~~~-------- 80 (706)
.++||+|||||+||++||.+|++. +.+|+|||+++. ... |. + ..+ . .+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~--g~~V~liE~~~~-GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 86 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY--GAKTLLVEAKAL-GGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDK 86 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--SCCEEEEESSCT-THHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC--CCcEEEEeCCCc-CCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccc
Confidence 357999999999999999999998 899999999852 111 10 0 000 0 000
Q ss_pred ----ccCcccc-----------ccccc-ccCCCcEEEEceeEEEEcCCCEEEeCCCe--EEEecEEEEccccccccC-CC
Q psy8791 81 ----KKLSDSR-----------RPMKS-VLPSGATWVKDKIVSFDPENNRVRTQAGS--EISYEYMIVASGIQMYYD-RV 141 (706)
Q Consensus 81 ----~~~~~~~-----------~~~~~-~~~~~v~~i~~~v~~id~~~~~v~~~~g~--~~~yd~lviAtG~~~~~~-~~ 141 (706)
.+...+. ..+.. +...+++++.++++.+++....+.+.+|+ ++.||+||+|||+.+..| ++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~~i 166 (479)
T 2hqm_A 87 EHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPENI 166 (479)
T ss_dssp GGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECCCTTS
T ss_pred ccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCCCC
Confidence 0000000 00111 12368999999888887665556666776 799999999999999888 88
Q ss_pred CCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecC
Q psy8791 142 KGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFP 221 (706)
Q Consensus 142 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~ 221 (706)
||.+ +. .+.+.+.. +... ..++
T Consensus 167 ~g~~---~~---------------------------------------------~~~~~~~~----l~~~-~~~v----- 188 (479)
T 2hqm_A 167 PGFE---LG---------------------------------------------TDSDGFFR----LEEQ-PKKV----- 188 (479)
T ss_dssp TTGG---GS---------------------------------------------BCHHHHHH----CSSC-CSEE-----
T ss_pred CCcc---cc---------------------------------------------cchHHHhc----cccc-CCeE-----
Confidence 8821 00 11111111 1111 1111
Q ss_pred CCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCE-
Q psy8791 222 ATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKE- 298 (706)
Q Consensus 222 ~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~- 298 (706)
+.++|+.. +......+.+.|. +|+++++.+.+++ ++.+.+.+.+.|++.||+++++++|.+++.+++.
T Consensus 189 ---vViGgG~i--g~E~A~~l~~~g~----~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~ 259 (479)
T 2hqm_A 189 ---VVVGAGYI--GIELAGVFHGLGS----ETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLSKIVKVEKNVETD 259 (479)
T ss_dssp ---EEECSSHH--HHHHHHHHHHTTC----EEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CC
T ss_pred ---EEECCCHH--HHHHHHHHHHcCC----ceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCc
Confidence 22344422 2233345666663 5999999998876 6889999999999999999999999999865322
Q ss_pred -EEEEeCCCc-eEEeecEEEECCCCCchhh--hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHH
Q psy8791 299 -AVFKSEDKT-ERLPYAIMHVTPPMGPVPE--LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVA 373 (706)
Q Consensus 299 -v~~~~~~~g-~~i~~D~vI~a~G~~~~~~--~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~ 373 (706)
+.+ .+++| +++++|.||+|+|.+|+.. +...++ .+++|+|.||+ +++ |+.|||||+|||+.. +.++..|.
T Consensus 260 ~~~v-~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl~~~~~G~i~vd~-~~~-t~~~~IyA~GD~~~~--~~~~~~A~ 334 (479)
T 2hqm_A 260 KLKI-HMNDSKSIDDVDELIWTIGRKSHLGMGSENVGIKLNSHDQIIADE-YQN-TNVPNIYSLGDVVGK--VELTPVAI 334 (479)
T ss_dssp CEEE-EETTSCEEEEESEEEECSCEEECCCSSGGGGTCCBCTTSCBCCCT-TCB-CSSTTEEECGGGTTS--SCCHHHHH
T ss_pred EEEE-EECCCcEEEEcCEEEECCCCCCccccChhhcCceECCCCCEeECC-CCc-cCCCCEEEEEecCCC--cccHHHHH
Confidence 333 33477 7899999999999999964 456788 67889999999 687 899999999999865 45788999
Q ss_pred HhHHHHHHHHH
Q psy8791 374 GQCKVVYDNLS 384 (706)
Q Consensus 374 ~qg~~~a~ni~ 384 (706)
.||+++|+||.
T Consensus 335 ~~g~~aa~~i~ 345 (479)
T 2hqm_A 335 AAGRKLSNRLF 345 (479)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999999996
No 47
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.95 E-value=2.7e-27 Score=261.50 Aligned_cols=297 Identities=16% Similarity=0.166 Sum_probs=201.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCccc----cc----------------c-cCcc------
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMF----TL----------------I-GGGM------ 80 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~----~~----------------~-~~~~------ 80 (706)
+.++||+|||||+||++||.+|++. +++|+|||+++.....+.. |. . ..+.
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~--g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~ 81 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQL--GFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVE 81 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEE
T ss_pred CccCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCc
Confidence 3468999999999999999999999 8999999999754222100 00 0 0000
Q ss_pred ccCcccc-----------ccccccc-CCCcEEEEceeEEEEcCCCEEEeCCC--eEEEecEEEEccccccccCCCCCCcc
Q psy8791 81 KKLSDSR-----------RPMKSVL-PSGATWVKDKIVSFDPENNRVRTQAG--SEISYEYMIVASGIQMYYDRVKGPSA 146 (706)
Q Consensus 81 ~~~~~~~-----------~~~~~~~-~~~v~~i~~~v~~id~~~~~v~~~~g--~~~~yd~lviAtG~~~~~~~~~g~~~ 146 (706)
.+...+. ..+...+ ..+++++.+++..++.+...|.+.+| .++.||+||+|||+.+..|+++|.+
T Consensus 82 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~~~g~~- 160 (470)
T 1dxl_A 82 IDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTID- 160 (470)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEECCBTTBCCC-
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCC-
Confidence 0000000 0011122 25799999888777765445555566 6899999999999999888888731
Q ss_pred cccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhcc-CCCEEEecCCCCe
Q psy8791 147 LINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQ-SGPVLYTFPATPI 225 (706)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~-~g~~vv~~~~~~v 225 (706)
. . .+ ++...+. ... .++.+ +
T Consensus 161 ------------------------------------~----~--~v---~~~~~~~-------~~~~~~~~v-------v 181 (470)
T 1dxl_A 161 ------------------------------------E----K--KI---VSSTGAL-------ALSEIPKKL-------V 181 (470)
T ss_dssp ------------------------------------S----S--SE---ECHHHHT-------TCSSCCSEE-------E
T ss_pred ------------------------------------c----c--cE---EeHHHhh-------hhhhcCCeE-------E
Confidence 0 0 00 0111100 110 11111 2
Q ss_pred eeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEE--E
Q psy8791 226 KCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAV--F 301 (706)
Q Consensus 226 ~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~--~ 301 (706)
.++|+.. +......+.+.|. +|+++++.+.+++ ++.+.+.+++.|++.||+++++++|.+++.+++.+. +
T Consensus 182 ViGgG~~--g~e~A~~l~~~g~----~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~ 255 (470)
T 1dxl_A 182 VIGAGYI--GLEMGSVWGRIGS----EVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTV 255 (470)
T ss_dssp ESCCSHH--HHHHHHHHHHHTC----EEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEE
T ss_pred EECCCHH--HHHHHHHHHHcCC----cEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEE
Confidence 2344432 2223344566664 5999999998886 688999999999999999999999999987654333 3
Q ss_pred EeC--CCceEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHh
Q psy8791 302 KSE--DKTERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQ 375 (706)
Q Consensus 302 ~~~--~~g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~q 375 (706)
... .+++++++|.||+|+|.+|+.. +.+.++ .+++|+|.||+ ++| |+.|+|||+|||+.. ++++..|..|
T Consensus 256 ~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~-~~~-t~~~~Iya~GD~~~~--~~~~~~A~~~ 331 (470)
T 1dxl_A 256 EPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNE-RFS-TNVSGVYAIGDVIPG--PMLAHKAEED 331 (470)
T ss_dssp EESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCT-TCB-CSSTTEEECSTTSSS--CCCHHHHHHH
T ss_pred EecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECc-CCc-cCCCCEEEEeccCCC--CccHHHHHHH
Confidence 221 1247899999999999999954 456777 67789999999 688 899999999999986 4578899999
Q ss_pred HHHHHHHHHHHHcCCCCCCccccee
Q psy8791 376 CKVVYDNLSAVMKNRALPHEYNGYT 400 (706)
Q Consensus 376 g~~~a~ni~~~l~g~~~~~~~~~~~ 400 (706)
|+++|+||. |++.++.|....
T Consensus 332 g~~aa~~i~----g~~~~~~~~~~p 352 (470)
T 1dxl_A 332 GVACVEYLA----GKVGHVDYDKVP 352 (470)
T ss_dssp HHHHHHHHT----TSCCCCCTTSCC
T ss_pred HHHHHHHHc----CCCcCCCCCCCC
Confidence 999999995 444344454433
No 48
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.95 E-value=4.5e-27 Score=260.30 Aligned_cols=282 Identities=13% Similarity=0.166 Sum_probs=192.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHh-hcCCCeEEEEcC--------CCCcccCccc----cc---------------cc-Ccc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTS-KLGKGQVSIVEP--------TDDHYYQPMF----TL---------------IG-GGM 80 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~-~~~~~~Vtlie~--------~~~~~~~p~~----~~---------------~~-~~~ 80 (706)
++||+|||||+||++||.+|++ . |++|+|||+ .+.....+.. |. .. .+.
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~--G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~ 80 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLH--KKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGW 80 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHH--CCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTE
T ss_pred cccEEEECCCHHHHHHHHHHHHHc--CCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCc
Confidence 5799999999999999999999 8 899999992 2222111100 00 00 000
Q ss_pred --------ccCcccc-----------ccccc-ccCC-CcEEEEceeEEEEcCCCEEEeC-----CC---eEEEecEEEEc
Q psy8791 81 --------KKLSDSR-----------RPMKS-VLPS-GATWVKDKIVSFDPENNRVRTQ-----AG---SEISYEYMIVA 131 (706)
Q Consensus 81 --------~~~~~~~-----------~~~~~-~~~~-~v~~i~~~v~~id~~~~~v~~~-----~g---~~~~yd~lviA 131 (706)
.+...+. ..+.. +... +++++.++++.+++ +++.+. +| .++.||+||+|
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~--~~v~v~~~~~~~g~~~~~~~~d~lviA 158 (490)
T 1fec_A 81 ELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDN--HTVLVRESADPNSAVLETLDTEYILLA 158 (490)
T ss_dssp ECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEET--TEEEEESSSSTTSCEEEEEEEEEEEEC
T ss_pred ccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeC--CEEEEEeeccCCCCceEEEEcCEEEEe
Confidence 0000000 01111 1235 89999999998886 456663 56 68999999999
Q ss_pred cccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhc
Q psy8791 132 SGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHF 211 (706)
Q Consensus 132 tG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 211 (706)
||+.+..|++||.+ +. .+.+.+.. +...
T Consensus 159 tGs~p~~p~i~g~~---~~---------------------------------------------~~~~~~~~----~~~~ 186 (490)
T 1fec_A 159 TGSWPQHLGIEGDD---LC---------------------------------------------ITSNEAFY----LDEA 186 (490)
T ss_dssp CCEEECCCCSBTGG---GC---------------------------------------------BCHHHHTT----CSSC
T ss_pred CCCCCCCCCCCCcc---ce---------------------------------------------ecHHHHhh----hhhc
Confidence 99999888888821 00 01111000 0001
Q ss_pred cCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCce
Q psy8791 212 QSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKAL 289 (706)
Q Consensus 212 ~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v 289 (706)
..++ +.++|+.. +......+.+.. ....+|+++++.+.+++ ++++.+.+.+.|++.||+++++++|
T Consensus 187 -~~~v--------vViGgG~i--g~E~A~~l~~~~-~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v 254 (490)
T 1fec_A 187 -PKRA--------LCVGGGYI--SIEFAGIFNAYK-ARGGQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENP 254 (490)
T ss_dssp -CSEE--------EEECSSHH--HHHHHHHHHHHS-CTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCCE
T ss_pred -CCeE--------EEECCCHH--HHHHHHHHHhhc-cCcCeEEEEEcCCCcccccCHHHHHHHHHHHHhCCCEEEeCCEE
Confidence 1111 22344322 222223455551 01236999999998887 6889999999999999999999999
Q ss_pred EEEeCCCC-EEEEEeCCCceEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCC
Q psy8791 290 VEIDLANK-EAVFKSEDKTERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLP 364 (706)
Q Consensus 290 ~~i~~~~~-~v~~~~~~~g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~ 364 (706)
.+++.+++ .+.+ .+++|+++++|.||+|+|.+|+.. +.+.|+ .+++|+|.||+ ++| |+.|+|||+|||+..
T Consensus 255 ~~i~~~~~~~~~v-~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~-~~~-t~~~~IyA~GD~~~~- 330 (490)
T 1fec_A 255 AKVTKNADGTRHV-VFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDA-YSK-TNVDNIYAIGDVTDR- 330 (490)
T ss_dssp EEEEECTTSCEEE-EETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCT-TCB-CSSTTEEECGGGGCS-
T ss_pred EEEEEcCCCEEEE-EECCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEECC-CCc-cCCCCEEEEeccCCC-
Confidence 99986542 2333 334778999999999999999953 566788 67799999999 688 899999999999975
Q ss_pred CCchHHHHHHhHHHHHHHHH
Q psy8791 365 TSKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 365 ~~~~~~~a~~qg~~~a~ni~ 384 (706)
++++..|..||+++|+||.
T Consensus 331 -~~l~~~A~~~g~~aa~~i~ 349 (490)
T 1fec_A 331 -VMLTPVAINEGAAFVDTVF 349 (490)
T ss_dssp -CCCHHHHHHHHHHHHHHHH
T ss_pred -ccCHHHHHHHHHHHHHHhc
Confidence 4688999999999999995
No 49
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.95 E-value=3.3e-27 Score=262.47 Aligned_cols=284 Identities=16% Similarity=0.190 Sum_probs=197.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcC-CCeEEEEcCCCCcccC-------cccc------------cc-cCcc--------
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLG-KGQVSIVEPTDDHYYQ-------PMFT------------LI-GGGM-------- 80 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~-~~~Vtlie~~~~~~~~-------p~~~------------~~-~~~~-------- 80 (706)
++||||||||+||++||.+|++..+ +++|+|||+++ .... |... .. ..+.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 3689999999999999999999865 78999999987 2111 1000 00 0000
Q ss_pred ccCcccc-----------ccccccc-CCCcEEEEceeEEEEcC----CC--EEEeCCCe--EEEecEEEEccccccccCC
Q psy8791 81 KKLSDSR-----------RPMKSVL-PSGATWVKDKIVSFDPE----NN--RVRTQAGS--EISYEYMIVASGIQMYYDR 140 (706)
Q Consensus 81 ~~~~~~~-----------~~~~~~~-~~~v~~i~~~v~~id~~----~~--~v~~~~g~--~~~yd~lviAtG~~~~~~~ 140 (706)
.+...+. ..+.+++ ..+++++.++++.++++ .+ .|.+++|. ++.||+||+|||+.+..|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~~p~ 160 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRILP 160 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEECCCG
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCC
Confidence 0011110 0012222 36899999998888872 23 45556665 7999999999999998888
Q ss_pred CCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEec
Q psy8791 141 VKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTF 220 (706)
Q Consensus 141 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~ 220 (706)
+||.+ + ...+. ..+.+.. ... ..++
T Consensus 161 i~g~~--~---------------~~v~~------------~~~~~~~---------------------~~~-~~~v---- 185 (499)
T 1xdi_A 161 SAQPD--G---------------ERILT------------WRQLYDL---------------------DAL-PDHL---- 185 (499)
T ss_dssp GGCCC--S---------------SSEEE------------GGGGGGC---------------------SSC-CSSE----
T ss_pred CCCCC--c---------------CcEEe------------hhHhhhh---------------------hcc-CCeE----
Confidence 88832 0 00000 0111100 001 1112
Q ss_pred CCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCE
Q psy8791 221 PATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKE 298 (706)
Q Consensus 221 ~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~ 298 (706)
+.++|+.. +......+.+.|. +|+++++.+.+++ ++.+.+.+.+.+++.||+++++++|++++.+++.
T Consensus 186 ----vViGgG~i--g~E~A~~l~~~g~----~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~ 255 (499)
T 1xdi_A 186 ----IVVGSGVT--GAEFVDAYTELGV----PVTVVASQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTGAG 255 (499)
T ss_dssp ----EEESCSHH--HHHHHHHHHHTTC----CEEEECSSSSSSCCSSHHHHHHHHHHHHHTTCEEETTCCEEEEEECSSS
T ss_pred ----EEECCCHH--HHHHHHHHHHcCC----eEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCE
Confidence 22344422 2223344666664 3999999998886 7889999999999999999999999999876554
Q ss_pred EEEEeCCCceEEeecEEEECCCCCchh-h--hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHH
Q psy8791 299 AVFKSEDKTERLPYAIMHVTPPMGPVP-E--LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAG 374 (706)
Q Consensus 299 v~~~~~~~g~~i~~D~vI~a~G~~~~~-~--~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~ 374 (706)
+.+. +++|+++++|.||+|+|.+|+. + +.+.|+ .+++|+|.||+ ++| |+.|+|||+|||+.. ++++..|..
T Consensus 256 v~v~-~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~-~~~-t~~~~IyA~GD~~~~--~~l~~~A~~ 330 (499)
T 1xdi_A 256 VLVT-MTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDR-VSR-TLATGIYAAGDCTGL--LPLASVAAM 330 (499)
T ss_dssp EEEE-ETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCS-SSB-CSSTTEEECSGGGTS--CSCHHHHHH
T ss_pred EEEE-ECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECC-Ccc-cCCCCEEEEeccCCC--cccHHHHHH
Confidence 5543 4578899999999999999995 4 566787 67789999999 688 899999999999986 357889999
Q ss_pred hHHHHHHHHH
Q psy8791 375 QCKVVYDNLS 384 (706)
Q Consensus 375 qg~~~a~ni~ 384 (706)
||+++|+||.
T Consensus 331 ~g~~aa~~i~ 340 (499)
T 1xdi_A 331 QGRIAMYHAL 340 (499)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999999995
No 50
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.95 E-value=2.3e-27 Score=263.27 Aligned_cols=307 Identities=16% Similarity=0.198 Sum_probs=202.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCccc----c------------c----ccCccccCccccc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMF----T------------L----IGGGMKKLSDSRR 88 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~----~------------~----~~~~~~~~~~~~~ 88 (706)
.++||+|||||+||++||.+|++. |++|+|||+++.....+.. | . .............
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~--G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 101 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQL--GMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKL 101 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCcc
Confidence 457999999999999999999998 8999999998754322110 0 0 0000000000000
Q ss_pred c------------------ccc-ccCCCcEEEEceeEEEEcCCCEEEeCCC--eEEEecEEEEccccccccCCCCCCccc
Q psy8791 89 P------------------MKS-VLPSGATWVKDKIVSFDPENNRVRTQAG--SEISYEYMIVASGIQMYYDRVKGPSAL 147 (706)
Q Consensus 89 ~------------------~~~-~~~~~v~~i~~~v~~id~~~~~v~~~~g--~~~~yd~lviAtG~~~~~~~~~g~~~~ 147 (706)
+ +.. +...+++++.+++..+++....|...+| .++.||+||+|||+.+ +.+||.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p--~~ipg~~-- 177 (491)
T 3urh_A 102 NLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDV--AGIPGVE-- 177 (491)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEEC--CCBTTBC--
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCC--CCCCCcc--
Confidence 0 111 1226899999988887766656666666 5799999999999885 4577721
Q ss_pred ccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeee
Q psy8791 148 INALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKC 227 (706)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~ 227 (706)
..+... .+ .+...+.. +.. .++.+ +.+
T Consensus 178 -----------------~~~~~~--------------------~~---~~~~~~~~----~~~--~~~~v-------vVi 204 (491)
T 3urh_A 178 -----------------VAFDEK--------------------TI---VSSTGALA----LEK--VPASM-------IVV 204 (491)
T ss_dssp -----------------CCCCSS--------------------SE---ECHHHHTS----CSS--CCSEE-------EEE
T ss_pred -----------------cccCCe--------------------eE---EehhHhhh----hhh--cCCeE-------EEE
Confidence 000000 00 01111000 000 11111 223
Q ss_pred CChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEE--EEe
Q psy8791 228 GGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAV--FKS 303 (706)
Q Consensus 228 ~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~--~~~ 303 (706)
+|+.. +......+.+.|. +|+++++.+.+++ ++.+.+.+.+.|++.||+++++++|.+++.+++.+. +..
T Consensus 205 GgG~~--g~E~A~~l~~~g~----~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~ 278 (491)
T 3urh_A 205 GGGVI--GLELGSVWARLGA----KVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEP 278 (491)
T ss_dssp CCSHH--HHHHHHHHHHHTC----EEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEE
T ss_pred CCCHH--HHHHHHHHHHcCC----EEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEe
Confidence 44422 2223344566664 5999999998886 788999999999999999999999999987655443 322
Q ss_pred CCCc--eEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHH
Q psy8791 304 EDKT--ERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCK 377 (706)
Q Consensus 304 ~~~g--~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~ 377 (706)
.++| +++++|.||+|+|++|+.. +...++ .+++|+|.||+ ++| |+.|+|||+|||+.. |+++..|..||+
T Consensus 279 ~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~-~~~-t~~~~IyA~GD~~~~--~~~~~~A~~~g~ 354 (491)
T 3urh_A 279 VKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDR-HFQ-TSIAGVYAIGDVVRG--PMLAHKAEDEGV 354 (491)
T ss_dssp TTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCT-TCB-CSSTTEEECGGGSSS--CCCHHHHHHHHH
T ss_pred cCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECC-CCC-CCCCCEEEEEecCCC--ccchhHHHHHHH
Confidence 2224 6899999999999999954 556677 78899999999 688 899999999999975 468899999999
Q ss_pred HHHHHHHHHHcCCCCCCcccceeeEEEEecCC
Q psy8791 378 VVYDNLSAVMKNRALPHEYNGYTSCPLVTGYS 409 (706)
Q Consensus 378 ~~a~ni~~~l~g~~~~~~~~~~~~~~~~~G~~ 409 (706)
.+|+||. |++..+.|.....|+ ...+.
T Consensus 355 ~aa~~i~----g~~~~~~~~~~p~~~-~~~p~ 381 (491)
T 3urh_A 355 AVAEIIA----GQAGHVNYDVIPGVV-YTQPE 381 (491)
T ss_dssp HHHHHHT----TSCCCCCTTCCCEEE-CSSSC
T ss_pred HHHHHHc----CCCcccCCCCCCEEE-EccCC
Confidence 9999995 544444555544443 33444
No 51
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.95 E-value=9.5e-27 Score=242.94 Aligned_cols=289 Identities=16% Similarity=0.185 Sum_probs=186.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcc----cccccCc-cccCccc-ccccccccCCCcEEEE
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPM----FTLIGGG-MKKLSDS-RRPMKSVLPSGATWVK 102 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~----~~~~~~~-~~~~~~~-~~~~~~~~~~~v~~i~ 102 (706)
.++||+|||||+||++||.+|++. +++|+|||++.. ...+. .+.+++. .....++ ........+....+..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~--g~~V~liE~~~~-gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRA--NLKTVMIERGIP-GGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQY 81 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCT-TGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC--CCCEEEEecCCC-CCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccc
Confidence 468999999999999999999999 899999998752 11111 0111110 0000011 1111122234455544
Q ss_pred -ceeEEEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccch
Q psy8791 103 -DKIVSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGL 181 (706)
Q Consensus 103 -~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 181 (706)
..+...+.....+...+++++.||+||||||+++..|++||.+ . +..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~~~~ipG~~----~----------------~~~~----------- 130 (312)
T 4gcm_A 82 GDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQ----E----------------LGGR----------- 130 (312)
T ss_dssp CCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEECCCCCTTTT----T----------------TBTT-----------
T ss_pred eeeeeeeeeecceeeccCCeEEEeceeEEcccCccCcCCCCChh----h----------------hCCc-----------
Confidence 3444556666667777788999999999999999999999932 0 0000
Q ss_pred hhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCc
Q psy8791 182 QEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGV 261 (706)
Q Consensus 182 ~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~ 261 (706)
.+... ... ....+.+.+++ .++|+.. ++..+..+++.|. +|+++++.+.
T Consensus 131 ---------~v~~~---~~~-----~~~~~~~k~vv--------ViGgG~i--g~E~A~~l~~~g~----~Vtlv~~~~~ 179 (312)
T 4gcm_A 131 ---------GVSYC---AVC-----DGAFFKNKRLF--------VIGGGDS--AVEEGTFLTKFAD----KVTIVHRRDE 179 (312)
T ss_dssp ---------TEESC---HHH-----HGGGGTTCEEE--------EECCSHH--HHHHHHHHTTTCS----EEEEECSSSS
T ss_pred ---------cEEee---ecc-----CccccCCCEEE--------EECCCHH--HHHHHHHHHhcCC----EEEEEecccc
Confidence 01000 000 00112222222 2344422 2223344555653 5999999998
Q ss_pred CCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCE---EE--EEeCCCceEEeecEEEECCCCCchh-hhhcCCCCCC
Q psy8791 262 LFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKE---AV--FKSEDKTERLPYAIMHVTPPMGPVP-ELATSRLVDQ 335 (706)
Q Consensus 262 ~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~---v~--~~~~~~g~~i~~D~vI~a~G~~~~~-~~~~~~l~~~ 335 (706)
+++... ...+.+++.++.......+..+...+.. .. .....++..+++|.|++++|..|+. .+...++.++
T Consensus 180 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~g~~~~ 256 (312)
T 4gcm_A 180 LRAQRI---LQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITND 256 (312)
T ss_dssp CCSCHH---HHHHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGGGGTCBCT
T ss_pred cCcchh---HHHHHHHhcCcceeeecceeeeeccccccccceeeeecCCceeEEeeeeEEeecCCCcCchhHHhcceecC
Confidence 876322 2345677888888887766665543321 11 1122356789999999999999994 4555688888
Q ss_pred CCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHc
Q psy8791 336 SGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMK 388 (706)
Q Consensus 336 ~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~ 388 (706)
+|+|.||+ ++| |+.|||||+|||+..+ ++++..|..||+.||.||.++|.
T Consensus 257 ~G~I~vd~-~~~-Ts~pgIyA~GDv~~~~-~~~~~~A~~~G~~AA~~i~~~L~ 306 (312)
T 4gcm_A 257 VGYIVTKD-DMT-TSVPGIFAAGDVRDKG-LRQIVTATGDGSIAAQSAAEYIE 306 (312)
T ss_dssp TSCBCCCT-TSB-CSSTTEEECSTTBSCS-CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEeeCC-CCc-cCCCCEEEEeecCCCc-chHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 788 9999999999999753 45788899999999999998875
No 52
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.95 E-value=2.2e-27 Score=263.57 Aligned_cols=295 Identities=14% Similarity=0.166 Sum_probs=190.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC------cc--c----------ccc-cCcc-----ccCcc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ------PM--F----------TLI-GGGM-----KKLSD 85 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~------p~--~----------~~~-~~~~-----~~~~~ 85 (706)
++||+|||||+||++||.+|++. +.+|+|||+++....+ |. + ... ..+. .+...
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~--g~~V~liE~~~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 79 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARH--NAKVALVEKSRLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPL 79 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSTTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCCcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHH
Confidence 47999999999999999999998 8999999998631100 11 0 000 0000 00000
Q ss_pred c-----------ccccccc-cCCCcEEEEceeEEEEcCCCEEEeCC-------------CeEEEecEEEEccccccccCC
Q psy8791 86 S-----------RRPMKSV-LPSGATWVKDKIVSFDPENNRVRTQA-------------GSEISYEYMIVASGIQMYYDR 140 (706)
Q Consensus 86 ~-----------~~~~~~~-~~~~v~~i~~~v~~id~~~~~v~~~~-------------g~~~~yd~lviAtG~~~~~~~ 140 (706)
+ ...+... ...+++++.++++.+|+ +.+.+.+ +.++.||+||+|||+.+..|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~--~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~p~ 157 (500)
T 1onf_A 80 LVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSE--NRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPP 157 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC----------------------------CBSSEEECCCCCBCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeC--CEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCCCC
Confidence 0 0011112 23689999988877764 4555543 567999999999999998888
Q ss_pred CCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEec
Q psy8791 141 VKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTF 220 (706)
Q Consensus 141 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~ 220 (706)
+||.+ +. .+.+.+ .....++.+
T Consensus 158 i~G~~---~~---------------------------------------------~~~~~~-------~~~~~~~~v--- 179 (500)
T 1onf_A 158 VKGIE---NT---------------------------------------------ISSDEF-------FNIKESKKI--- 179 (500)
T ss_dssp CTTGG---GC---------------------------------------------EEHHHH-------TTCCCCSEE---
T ss_pred CCCCC---cc---------------------------------------------cCHHHH-------hccCCCCeE---
Confidence 88821 00 000110 011111111
Q ss_pred CCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCC-C
Q psy8791 221 PATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLAN-K 297 (706)
Q Consensus 221 ~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~-~ 297 (706)
+.++|+.. +......+.+.|. +|+++++.+.+++ ++.+.+.+.+.|+++||++++++.|.+++.++ +
T Consensus 180 ----vViGgG~i--g~E~A~~l~~~g~----~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~ 249 (500)
T 1onf_A 180 ----GIVGSGYI--AVELINVIKRLGI----DSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSDK 249 (500)
T ss_dssp ----EEECCSHH--HHHHHHHHHTTTC----EEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSTT
T ss_pred ----EEECChHH--HHHHHHHHHHcCC----eEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCc
Confidence 22344422 2223344565653 5999999999887 68899999999999999999999999998643 2
Q ss_pred EEEEEeCCCceE-EeecEEEECCCCCchh-h--hhcCCCCCCCCceeeCccccccCCCCCEEEccccCCC----------
Q psy8791 298 EAVFKSEDKTER-LPYAIMHVTPPMGPVP-E--LATSRLVDQSGYVNVDKATLQHVKYSNVFAIGDCSNL---------- 363 (706)
Q Consensus 298 ~v~~~~~~~g~~-i~~D~vI~a~G~~~~~-~--~~~~~l~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~---------- 363 (706)
.+.+. +++|++ +++|.||+|+|.+|+. . +.++++..++|+|.||+ ++| |+.|+|||+|||+..
T Consensus 250 ~~~v~-~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~G~i~vd~-~~~-t~~~~iya~GD~~~~~~~~~~~~~~ 326 (500)
T 1onf_A 250 NLSIH-LSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVETNNNYIVVDE-NQR-TSVNNIYAVGDCCMVKKSKEIEDLN 326 (500)
T ss_dssp CEEEE-ETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCBSSSCEEECT-TCB-CSSSSEEECSTTEEEC---------
T ss_pred eEEEE-ECCCcEEEECCEEEECCCCCcCCCCCCchhcCccccCCEEEECC-Ccc-cCCCCEEEEeccccccccccccccc
Confidence 23332 346777 9999999999999996 3 45677733789999999 688 899999999999931
Q ss_pred ----------------------CCCchHHHHHHhHHHHHHHHHHHHcCCCCCCcccceeeE
Q psy8791 364 ----------------------PTSKTAAAVAGQCKVVYDNLSAVMKNRALPHEYNGYTSC 402 (706)
Q Consensus 364 ----------------------~~~~~~~~a~~qg~~~a~ni~~~l~g~~~~~~~~~~~~~ 402 (706)
..++++..|..||+++|+||.. +.+....|.....+
T Consensus 327 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g---~~~~~~~~~~~p~~ 384 (500)
T 1onf_A 327 LLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFL---KKTRKTNYKLIPTV 384 (500)
T ss_dssp ---------------------CBCCCCHHHHHHHHHHHHHHHHS---CTTCCCCCSSCCEE
T ss_pred cccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhC---CCCccCCCCCCCeE
Confidence 2356889999999999999952 23323445554443
No 53
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.95 E-value=2.6e-27 Score=261.06 Aligned_cols=282 Identities=15% Similarity=0.151 Sum_probs=192.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-------ccccc-------------c-cCcc-----ccC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-------PMFTL-------------I-GGGM-----KKL 83 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~~~~-------------~-~~~~-----~~~ 83 (706)
++||+|||||+||++||..|++. +++|+|||++.. ... |.... . ..+. .+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~--G~~V~liE~~~~-gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~ 79 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQL--GLSTAIVEPKYW-GGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDY 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSCT-THHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCC-CCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCH
Confidence 36899999999999999999998 899999999842 100 11000 0 0000 000
Q ss_pred cccc-----------ccccccc-CCCcEEEEceeEEEEcCCCEEEeCCC--eEEEecEEEEccccccccCCCCCCccccc
Q psy8791 84 SDSR-----------RPMKSVL-PSGATWVKDKIVSFDPENNRVRTQAG--SEISYEYMIVASGIQMYYDRVKGPSALIN 149 (706)
Q Consensus 84 ~~~~-----------~~~~~~~-~~~v~~i~~~v~~id~~~~~v~~~~g--~~~~yd~lviAtG~~~~~~~~~g~~~~~~ 149 (706)
.... ..+.+.+ ..+++++.+++..++.+...|.+.+| .++.||+||+|||+.+..|+++|.+
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~~~g~~---- 155 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLS---- 155 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCTTCCCB----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCC----
Confidence 0000 0011122 36899988776655544345556677 6899999999999999888878721
Q ss_pred ccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCC
Q psy8791 150 ALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGG 229 (706)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g 229 (706)
. . .++.+.+.. +... ..++ +.++|
T Consensus 156 ---------------------------------~-------~---~~~~~~~~~----~~~~-~~~v--------vViGg 179 (464)
T 2a8x_A 156 ---------------------------------A-------N---VVTYEEQIL----SREL-PKSI--------IIAGA 179 (464)
T ss_dssp ---------------------------------T-------T---EECHHHHHT----CSSC-CSEE--------EEECC
T ss_pred ---------------------------------c-------e---EEecHHHhh----cccc-CCeE--------EEECC
Confidence 0 0 011111110 0011 1111 22344
Q ss_pred hhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCc
Q psy8791 230 APMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKT 307 (706)
Q Consensus 230 ~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g 307 (706)
+.. +......+.+.|. +|+++++.+.+++ ++++.+.+++.|+++||+++++++|.+++.+++.+.+...++|
T Consensus 180 G~~--g~E~A~~l~~~g~----~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g 253 (464)
T 2a8x_A 180 GAI--GMEFGYVLKNYGV----DVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDG 253 (464)
T ss_dssp SHH--HHHHHHHHHHTTC----EEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSS
T ss_pred cHH--HHHHHHHHHHcCC----eEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCC
Confidence 432 2223334666664 5999999998886 6889999999999999999999999999876544443322234
Q ss_pred --eEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHH
Q psy8791 308 --ERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYD 381 (706)
Q Consensus 308 --~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ 381 (706)
+++++|.||+|+|.+|+.. +.+.++ .+++|+|.||+ ++| |+.|||||+|||+.. ++++..|..||+++|+
T Consensus 254 ~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~-~~~-t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~ 329 (464)
T 2a8x_A 254 VAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDD-YMR-TNVGHIYAIGDVNGL--LQLAHVAEAQGVVAAE 329 (464)
T ss_dssp CEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCT-TSB-CSSTTEEECGGGGCS--SCSHHHHHHHHHHHHH
T ss_pred ceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECc-CCc-cCCCCEEEeECcCCC--ccCHHHHHHHHHHHHH
Confidence 7899999999999999954 466687 67789999999 688 899999999999986 4578899999999999
Q ss_pred HHH
Q psy8791 382 NLS 384 (706)
Q Consensus 382 ni~ 384 (706)
||.
T Consensus 330 ~i~ 332 (464)
T 2a8x_A 330 TIA 332 (464)
T ss_dssp HHH
T ss_pred Hhc
Confidence 995
No 54
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.95 E-value=5.5e-27 Score=244.91 Aligned_cols=293 Identities=18% Similarity=0.169 Sum_probs=189.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcc--cc------cccCc--cccCccccccccc-ccCC
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPM--FT------LIGGG--MKKLSDSRRPMKS-VLPS 96 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~--~~------~~~~~--~~~~~~~~~~~~~-~~~~ 96 (706)
++.+||+|||||+||++||.+|+++ +++|+|||+++.....+. ++ .+++- .....++...+.+ +...
T Consensus 2 ~~~yDvvIIG~GpAGl~AA~~la~~--g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~ 79 (314)
T 4a5l_A 2 SNIHDVVIIGSGPAAHTAAIYLGRS--SLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKY 79 (314)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHT--TCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHC--CCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhc
Confidence 3468999999999999999999999 899999999864222211 00 01000 0000111111111 2235
Q ss_pred CcEEEEceeEEEEcCCC--EEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCcccccc
Q psy8791 97 GATWVKDKIVSFDPENN--RVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDF 174 (706)
Q Consensus 97 ~v~~i~~~v~~id~~~~--~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (706)
++++...++..+....+ .+.+.++.++.||+||+|||+.++.|++||.+
T Consensus 80 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~~~ipG~~----------------------------- 130 (314)
T 4a5l_A 80 GTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGED----------------------------- 130 (314)
T ss_dssp TCEEECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECCCCCTTHH-----------------------------
T ss_pred CcEEEEeEEEEeecCCCceEEEECCCeEEEEeEEEEcccccccccCCCccc-----------------------------
Confidence 77777777777766544 56677788999999999999999999999932
Q ss_pred ccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEE
Q psy8791 175 LRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLT 254 (706)
Q Consensus 175 ~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~ 254 (706)
..... .+.. . ...........++.+ +.++|+. +++..+..+.+.|. +|+
T Consensus 131 --------~~~~~---~~~~---~----~~~~~~~~~~~~~~v-------vViGgG~--ig~e~A~~l~~~G~----~Vt 179 (314)
T 4a5l_A 131 --------KYWQN---GVSA---C----AICDGAVPIFRNKVL-------MVVGGGD--AAMEEALHLTKYGS----KVI 179 (314)
T ss_dssp --------HHBTT---TEES---C----HHHHTTSGGGTTSEE-------EEECSSH--HHHHHHHHHTTTSS----EEE
T ss_pred --------ccccc---ceee---e----hhhhhhhhhcCCCeE-------EEECCCh--HHHHHHHHHHHhCC----eee
Confidence 11100 0000 0 000001111122222 2234432 23333445666664 599
Q ss_pred EEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCC---EEEEE--eCCCceEEeecEEEECCCCCchhhhhc
Q psy8791 255 YCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANK---EAVFK--SEDKTERLPYAIMHVTPPMGPVPELAT 329 (706)
Q Consensus 255 l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~---~v~~~--~~~~g~~i~~D~vI~a~G~~~~~~~~~ 329 (706)
++++.+.....+. ...+.+...+++.+....+.++...+. .+.+. ...+++++++|.+++++|.+||..+..
T Consensus 180 ~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l~ 256 (314)
T 4a5l_A 180 ILHRRDAFRASKT---MQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLG 256 (314)
T ss_dssp EECSSSSCCSCHH---HHHHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGT
T ss_pred eecccccccccch---hhhhhhcccceeeEeeeeeEEEEeeeeccceeEEeecccccceeeccccceEecccccChhHhc
Confidence 9998777654332 334556677888888888888765432 23332 234678899999999999999965555
Q ss_pred CCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcC
Q psy8791 330 SRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKN 389 (706)
Q Consensus 330 ~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g 389 (706)
.++ .+++|.+ ||+ ++| |+.|||||+|||+..+. +++..|..||+.||.++.++|+.
T Consensus 257 ~~~~~~~~G~i-v~~-~~~-Ts~pgIyA~GDv~~~~~-~~~~~A~~~G~~AA~~~~~yL~~ 313 (314)
T 4a5l_A 257 GQVKTADDGYI-LTE-GPK-TSVDGVFACGDVCDRVY-RQAIVAAGSGCMAALSCEKWLQT 313 (314)
T ss_dssp TSSCBCTTSCB-CCB-TTB-CSSTTEEECSTTTCSSC-CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccceEcCCeeE-eCC-CCc-cCCCCEEEEEeccCCcc-hHHHHHHHHHHHHHHHHHHHHhc
Confidence 544 7788876 787 677 99999999999998753 46778999999999999988853
No 55
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.95 E-value=1e-26 Score=242.44 Aligned_cols=289 Identities=16% Similarity=0.152 Sum_probs=192.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCccc--CcccccccCc-cccCccccccccccc-CCCcEEEEc-ee
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYY--QPMFTLIGGG-MKKLSDSRRPMKSVL-PSGATWVKD-KI 105 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~--~p~~~~~~~~-~~~~~~~~~~~~~~~-~~~v~~i~~-~v 105 (706)
+||+|||||+||++||..|++. +++|+|||+...-.+ .+.++..... ......+...+.+.. ..+++++.+ +|
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~--g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v 79 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARK--GIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSA 79 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT--TCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCE
T ss_pred CCEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEE
Confidence 6899999999999999999998 899999987531111 1111111110 011112222232322 368898887 99
Q ss_pred EEEEcC-----CCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccc
Q psy8791 106 VSFDPE-----NNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSG 180 (706)
Q Consensus 106 ~~id~~-----~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (706)
+.++++ ...|.+++|.++.||+||+|||+.+..+.+||.+ + |..+
T Consensus 80 ~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~~~~g~~--~------------------~~~~---------- 129 (310)
T 1fl2_A 80 SKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGED--Q------------------YRTK---------- 129 (310)
T ss_dssp EEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTT--T------------------TBTT----------
T ss_pred EEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChh--h------------------cccc----------
Confidence 999875 3367788888899999999999998888888831 0 0000
Q ss_pred hhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCC
Q psy8791 181 LQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMG 260 (706)
Q Consensus 181 l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~ 260 (706)
.+.. ... ... ....+.++++ +++++. +......+.+.+ .+|+++++.+
T Consensus 130 ----------~~~~---~~~---~~~--~~~~~~~v~V--------vG~G~~--g~e~A~~l~~~g----~~Vtlv~~~~ 177 (310)
T 1fl2_A 130 ----------GVTY---CPH---CDG--PLFKGKRVAV--------IGGGNS--GVEAAIDLAGIV----EHVTLLEFAP 177 (310)
T ss_dssp ----------TEES---CHH---HHG--GGGBTCEEEE--------ECCSHH--HHHHHHHHHTTB----SEEEEECSSS
T ss_pred ----------eeEE---ecc---CcH--hhcCCCEEEE--------ECCCHH--HHHHHHHHHHhC----CEEEEEEeCc
Confidence 1110 000 000 0112222222 333322 122223355444 3699999888
Q ss_pred cCCCchhHHHHHHHHHHh-CCceEEcCCceEEEeCCCC---EEEEEeCCCc--eEEeecEEEECCCCCch-hhhhcCCC-
Q psy8791 261 VLFPSPFYAEKIHDILIG-RGVDVHKGKALVEIDLANK---EAVFKSEDKT--ERLPYAIMHVTPPMGPV-PELATSRL- 332 (706)
Q Consensus 261 ~~~~~~~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~---~v~~~~~~~g--~~i~~D~vI~a~G~~~~-~~~~~~~l- 332 (706)
.+..+ ..+.+.|++ .||++++++++.++..+++ .+.+....+| .++++|.||+|+|++|+ +++.+ .+
T Consensus 178 ~~~~~----~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~-~l~ 252 (310)
T 1fl2_A 178 EMKAD----QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEG-AVE 252 (310)
T ss_dssp SCCSC----HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTT-TSC
T ss_pred ccCcc----HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHHhc-ccc
Confidence 77433 345666777 6999999999999987644 2444432234 47899999999999999 45554 35
Q ss_pred CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCCC
Q psy8791 333 VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNRA 391 (706)
Q Consensus 333 ~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~~ 391 (706)
.+++|++.||+ +++ |+.|+|||+|||+..+ ++++..|..||+.+|.||.+.+.+++
T Consensus 253 ~~~~g~i~vd~-~~~-t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~~~ 308 (310)
T 1fl2_A 253 RNRMGEIIIDA-KCE-TNVKGVFAAGDCTTVP-YKQIIIATGEGAKASLSAFDYLIRTK 308 (310)
T ss_dssp BCTTSCBCCCT-TCB-CSSTTEEECSTTBSCS-SCCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred ccCCCcEEcCC-CCc-cCCCCEEEeecccCCc-chhhhhhHhhHHHHHHHHHHHHHHhc
Confidence 67789999999 688 8999999999999975 35778899999999999999998764
No 56
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.95 E-value=5.8e-27 Score=246.93 Aligned_cols=299 Identities=16% Similarity=0.103 Sum_probs=192.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcC----CCCcccCccc----ccccCc--cccCccccccccccc-CCCc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEP----TDDHYYQPMF----TLIGGG--MKKLSDSRRPMKSVL-PSGA 98 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~----~~~~~~~p~~----~~~~~~--~~~~~~~~~~~~~~~-~~~v 98 (706)
.++|+|||||++|+++|..|++. +++|+|||+ .......... ...+.- ......+...+.+.. ..++
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~--g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv 85 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARA--ELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGT 85 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCC
Confidence 46899999999999999999998 899999998 2211100000 000000 001111222222222 3689
Q ss_pred EEEEceeEEEEcCCC--EEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCcccccccc
Q psy8791 99 TWVKDKIVSFDPENN--RVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLR 176 (706)
Q Consensus 99 ~~i~~~v~~id~~~~--~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (706)
+++.++|+.++.+.+ +|.+ ++.++.||+||+|+|+.+..+.+||.+ ++ ...|..+.++..
T Consensus 86 ~~~~~~v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~~~~~g~~--~~--------------~~~~~~~~~~~~- 147 (333)
T 1vdc_A 86 TIFTETVTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKRLSFVGSG--EV--------------LGGFWNRGISAC- 147 (333)
T ss_dssp EEECCCCCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECCCCCBTCS--SS--------------SSCCBTTTEESC-
T ss_pred EEEEeEEEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCCCCCCCcc--cc--------------ccccccCcEEEe-
Confidence 998888999998766 5666 677899999999999998888888832 00 000111111100
Q ss_pred CccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEE
Q psy8791 177 RPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYC 256 (706)
Q Consensus 177 ~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~ 256 (706)
. .....+....+.+++ .++++.. +......+.+.+ .+|+++
T Consensus 148 ----------------------~---~~~~~~~~~~~~~v~--------VvG~G~~--g~e~A~~l~~~g----~~V~lv 188 (333)
T 1vdc_A 148 ----------------------A---VCDGAAPIFRNKPLA--------VIGGGDS--AMEEANFLTKYG----SKVYII 188 (333)
T ss_dssp ----------------------H---HHHTTSGGGTTSEEE--------EECCSHH--HHHHHHHHTTTS----SEEEEE
T ss_pred ----------------------c---cCccchhhcCCCeEE--------EECCChH--HHHHHHHHHhcC----CeEEEE
Confidence 0 000000001122222 2333322 222223344444 369999
Q ss_pred eCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCC-----EEEEEeCCCc--eEEeecEEEECCCCCchhhhhc
Q psy8791 257 TGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANK-----EAVFKSEDKT--ERLPYAIMHVTPPMGPVPELAT 329 (706)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~-----~v~~~~~~~g--~~i~~D~vI~a~G~~~~~~~~~ 329 (706)
++.+.+...+.+ .++.+++.||++++++++.+++.+++ .+.+....+| +++++|.||+|+|++|+..+.+
T Consensus 189 ~~~~~~~~~~~~---~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~ 265 (333)
T 1vdc_A 189 HRRDAFRASKIM---QQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLD 265 (333)
T ss_dssp CSSSSCCSCHHH---HHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGT
T ss_pred ecCCcCCccHHH---HHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHhh
Confidence 998876543222 23456779999999999999987653 2555432234 6899999999999999965555
Q ss_pred CCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCCCC
Q psy8791 330 SRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNRAL 392 (706)
Q Consensus 330 ~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~~~ 392 (706)
.++ .+++|++.||+ +++.|+.|+|||+|||+..+ ++++..|..||+.+|.||.+.+.+++.
T Consensus 266 ~~l~~~~~G~i~vd~-~~~~t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~~~~ 327 (333)
T 1vdc_A 266 GGVELDSDGYVVTKP-GTTQTSVPGVFAAGDVQDKK-YRQAITAAGTGCMAALDAEHYLQEIGS 327 (333)
T ss_dssp TSSCBCTTSCBCCCT-TSCBCSSTTEEECGGGGCSS-CCCHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred ccccccCCCCEEech-hhcccCCCCEEEeeeccCCC-chhHHHHHHhHHHHHHHHHHHHHhccc
Confidence 667 67789999998 55558999999999999875 467889999999999999999987764
No 57
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.95 E-value=3.2e-26 Score=251.76 Aligned_cols=278 Identities=15% Similarity=0.185 Sum_probs=194.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcc----cc---------------ccc-Cccc------c
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPM----FT---------------LIG-GGMK------K 82 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~----~~---------------~~~-~~~~------~ 82 (706)
.++||+|||||+||++||.+|++. +++|+|||+++. ...+. .| ... .+.. +
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~--g~~V~liE~~~~-GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 79 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAF--GKRVALIESKAL-GGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLD 79 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCT-THHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC--CCcEEEEcCCCC-CCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcC
Confidence 357999999999999999999998 899999999852 11100 00 000 0000 0
Q ss_pred Ccccc-----------cccccc-cCCCcEEEEceeEEEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccc
Q psy8791 83 LSDSR-----------RPMKSV-LPSGATWVKDKIVSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINA 150 (706)
Q Consensus 83 ~~~~~-----------~~~~~~-~~~~v~~i~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~ 150 (706)
...+. ..+... ...+++++.++++.++. +.|.+ +|.++.||+||+|||+.+..|++||.+ +
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~--~~v~~-~g~~~~~d~lviAtGs~p~~p~i~G~~---~- 152 (463)
T 2r9z_A 80 WPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDA--HTIEV-EGQRLSADHIVIATGGRPIVPRLPGAE---L- 152 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--TEEEE-TTEEEEEEEEEECCCEEECCCSCTTGG---G-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccC--CEEEE-CCEEEEcCEEEECCCCCCCCCCCCCcc---c-
Confidence 00000 001111 23689999998888874 56777 677899999999999999888889821 0
Q ss_pred cccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCCh
Q psy8791 151 LGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGA 230 (706)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~ 230 (706)
..+.+.+.. +... .+.+ +.++|+
T Consensus 153 --------------------------------------------~~~~~~~~~----~~~~--~~~v-------vVvGgG 175 (463)
T 2r9z_A 153 --------------------------------------------GITSDGFFA----LQQQ--PKRV-------AIIGAG 175 (463)
T ss_dssp --------------------------------------------SBCHHHHHH----CSSC--CSEE-------EEECCS
T ss_pred --------------------------------------------eecHHHHhh----hhcc--CCEE-------EEECCC
Confidence 011111111 1111 1111 223333
Q ss_pred hHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCce
Q psy8791 231 PMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTE 308 (706)
Q Consensus 231 ~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~ 308 (706)
.. +......+.+.|. +|+++++.+.+++ ++.+.+.+.+.+++.||+++++++|.+++.+++.+.+. +++|+
T Consensus 176 ~~--g~e~A~~l~~~G~----~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~-~~~G~ 248 (463)
T 2r9z_A 176 YI--GIELAGLLRSFGS----EVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLV-AQDGT 248 (463)
T ss_dssp HH--HHHHHHHHHHTTC----EEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEE-ETTCC
T ss_pred HH--HHHHHHHHHhcCC----EEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEE-EeCCc
Confidence 22 2233345666664 5999999988776 67888999999999999999999999998654434333 34777
Q ss_pred -EEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHH
Q psy8791 309 -RLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNL 383 (706)
Q Consensus 309 -~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni 383 (706)
++++|.||+|+|.+|+.. +.+.++ .+++|+|.||+ +++ |+.|||||+|||+.. +.++..|..||+.+|.||
T Consensus 249 ~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~-~~~-t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i 324 (463)
T 2r9z_A 249 RLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDA-YQN-TNVPGVYALGDITGR--DQLTPVAIAAGRRLAERL 324 (463)
T ss_dssp EEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCT-TSB-CSSTTEEECGGGGTS--CCCHHHHHHHHHHHHHHH
T ss_pred EEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECC-CCc-cCCCCEEEEeecCCC--cccHHHHHHHHHHHHHHH
Confidence 899999999999999952 455677 67799999999 687 899999999999875 457889999999999999
Q ss_pred H
Q psy8791 384 S 384 (706)
Q Consensus 384 ~ 384 (706)
.
T Consensus 325 ~ 325 (463)
T 2r9z_A 325 F 325 (463)
T ss_dssp H
T ss_pred c
Confidence 5
No 58
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.95 E-value=6.1e-27 Score=259.09 Aligned_cols=291 Identities=16% Similarity=0.184 Sum_probs=193.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-------cccc------------ccc-Ccc------ccC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-------PMFT------------LIG-GGM------KKL 83 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~~~------------~~~-~~~------~~~ 83 (706)
++||+|||||+||++||.+|++. +++|+|||+++..... |... ... .+. .+.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~--G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~ 83 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADE--GLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDI 83 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCH
Confidence 47999999999999999999998 8999999997653211 1000 000 000 000
Q ss_pred ccccc-----------cccccc-CCCcEEEEceeEEEEcCCCEEEeCCC------------eEEEecEEEEccccccccC
Q psy8791 84 SDSRR-----------PMKSVL-PSGATWVKDKIVSFDPENNRVRTQAG------------SEISYEYMIVASGIQMYYD 139 (706)
Q Consensus 84 ~~~~~-----------~~~~~~-~~~v~~i~~~v~~id~~~~~v~~~~g------------~~~~yd~lviAtG~~~~~~ 139 (706)
..+.. .+...+ ..+++++.+++..++...-.+.+.+| .++.||+||+|||+.+..|
T Consensus 84 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~~ 163 (482)
T 1ojt_A 84 DMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKL 163 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCCCC
Confidence 00000 011122 36899988877666643323333445 5799999999999988766
Q ss_pred C-CCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEE
Q psy8791 140 R-VKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLY 218 (706)
Q Consensus 140 ~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv 218 (706)
+ +|. + + .+ ++.+.+.. +... ..++
T Consensus 164 ~~i~~-~--~------------------------------------------~v---~~~~~~~~----~~~~-~~~v-- 188 (482)
T 1ojt_A 164 PFIPE-D--P------------------------------------------RI---IDSSGALA----LKEV-PGKL-- 188 (482)
T ss_dssp SSCCC-C--T------------------------------------------TE---ECHHHHTT----CCCC-CSEE--
T ss_pred CCCCc-c--C------------------------------------------cE---EcHHHHhc----cccc-CCeE--
Confidence 5 442 0 0 00 01111100 0001 1111
Q ss_pred ecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCC
Q psy8791 219 TFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLAN 296 (706)
Q Consensus 219 ~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~ 296 (706)
+.++|+.. +......+++.|. +|+++++.+.+++ ++++.+.+.+.|++.||+++++++|.+++.++
T Consensus 189 ------vViGgG~i--g~E~A~~l~~~G~----~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~ 256 (482)
T 1ojt_A 189 ------LIIGGGII--GLEMGTVYSTLGS----RLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKE 256 (482)
T ss_dssp ------EEESCSHH--HHHHHHHHHHHTC----EEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEEECSCEEEEEEEET
T ss_pred ------EEECCCHH--HHHHHHHHHHcCC----eEEEEEECCccccccCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcC
Confidence 22344422 2223344666664 5999999999886 78899999999999999999999999998655
Q ss_pred CEEEEEeCCC----ceEEeecEEEECCCCCchh-h--hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCch
Q psy8791 297 KEAVFKSEDK----TERLPYAIMHVTPPMGPVP-E--LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKT 368 (706)
Q Consensus 297 ~~v~~~~~~~----g~~i~~D~vI~a~G~~~~~-~--~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~ 368 (706)
+.+.+.. ++ |+++++|.||+|+|.+|+. + +.+.++ .+++|+|.||+ ++| |+.|||||+|||+.. +++
T Consensus 257 ~~~~v~~-~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~-~~~-t~~~~IyA~GD~~~~--~~l 331 (482)
T 1ojt_A 257 DGVYVTF-EGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDK-QMR-TNVPHIYAIGDIVGQ--PML 331 (482)
T ss_dssp TEEEEEE-ESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCT-TSB-CSSTTEEECGGGTCS--SCC
T ss_pred CeEEEEE-eccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeCC-Ccc-cCCCCEEEEEcccCC--Ccc
Confidence 4433322 23 6789999999999999995 4 466788 67789999999 788 899999999999986 458
Q ss_pred HHHHHHhHHHHHHHHHHHHcCCCCCCcccc
Q psy8791 369 AAAVAGQCKVVYDNLSAVMKNRALPHEYNG 398 (706)
Q Consensus 369 ~~~a~~qg~~~a~ni~~~l~g~~~~~~~~~ 398 (706)
+..|..||+++|+||. |++.++.|..
T Consensus 332 ~~~A~~~g~~aa~~i~----g~~~~~~~~~ 357 (482)
T 1ojt_A 332 AHKAVHEGHVAAENCA----GHKAYFDARV 357 (482)
T ss_dssp HHHHHHHHHHHHHHHT----TCCCCCCCCC
T ss_pred HHHHHHHHHHHHHHHc----CCCccCCCCC
Confidence 8899999999999995 4443444443
No 59
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.95 E-value=4.8e-26 Score=253.69 Aligned_cols=301 Identities=15% Similarity=0.176 Sum_probs=196.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc--------ccCccc----c------------------ccc
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH--------YYQPMF----T------------------LIG 77 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~--------~~~p~~----~------------------~~~ 77 (706)
...+||+|||||+||++||.+|++. +.+|+|||+++.. ...+.. | ...
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~--G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g 107 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQY--GKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYG 107 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHT--TCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC--CCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcC
Confidence 3457999999999999999999998 8999999996411 100000 0 000
Q ss_pred C-----ccccCccccc-----------cccccc-CCCcEEEEceeEEEEcCCCEEEeCCCe--EEEecEEEEcccccccc
Q psy8791 78 G-----GMKKLSDSRR-----------PMKSVL-PSGATWVKDKIVSFDPENNRVRTQAGS--EISYEYMIVASGIQMYY 138 (706)
Q Consensus 78 ~-----~~~~~~~~~~-----------~~~~~~-~~~v~~i~~~v~~id~~~~~v~~~~g~--~~~yd~lviAtG~~~~~ 138 (706)
. ...+...+.. .+...+ ..+++++.+++..+++....|...+|+ ++.||+||||||+.+..
T Consensus 108 ~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~~ 187 (519)
T 3qfa_A 108 WKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRY 187 (519)
T ss_dssp BCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEECC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCcCC
Confidence 0 0000000000 011111 268999999999999877677766664 79999999999999999
Q ss_pred CCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEE
Q psy8791 139 DRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLY 218 (706)
Q Consensus 139 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv 218 (706)
|++||.+ ... .+.+.+.. +... .+++
T Consensus 188 p~i~G~~-------------------------------------~~~----------~t~~~~~~----l~~~-~~~v-- 213 (519)
T 3qfa_A 188 LGIPGDK-------------------------------------EYC----------ISSDDLFS----LPYC-PGKT-- 213 (519)
T ss_dssp CCCTTHH-------------------------------------HHC----------BCHHHHTT----CSSC-CCSE--
T ss_pred CCCCCcc-------------------------------------Cce----------EcHHHHhh----hhhc-CCeE--
Confidence 9999821 100 01111000 0011 1222
Q ss_pred ecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCC
Q psy8791 219 TFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLAN 296 (706)
Q Consensus 219 ~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~ 296 (706)
+.++|+.. +......+++.|. +|+++++. .+++ ++++.+.+.+.|++.||++++++.+.++...+
T Consensus 214 ------vVIGgG~i--g~E~A~~l~~~G~----~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~ 280 (519)
T 3qfa_A 214 ------LVVGASYV--ALECAGFLAGIGL----DVTVMVRS-ILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIE 280 (519)
T ss_dssp ------EEECCSHH--HHHHHHHHHHTTC----CEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEE
T ss_pred ------EEECCcHH--HHHHHHHHHHcCC----eEEEEecc-cccccCCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEcc
Confidence 22344422 2233345666664 38999874 5555 68899999999999999999998777765321
Q ss_pred ----CE--EEEEeCCCc--eEEeecEEEECCCCCchhh---hhcCCC-CC-CCCceeeCccccccCCCCCEEEccccCCC
Q psy8791 297 ----KE--AVFKSEDKT--ERLPYAIMHVTPPMGPVPE---LATSRL-VD-QSGYVNVDKATLQHVKYSNVFAIGDCSNL 363 (706)
Q Consensus 297 ----~~--v~~~~~~~g--~~i~~D~vI~a~G~~~~~~---~~~~~l-~~-~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~ 363 (706)
+. +.+...+.+ .++++|.||+|+|.+|+.. +...++ .+ ++|+|.||+ ++| |+.|||||+|||+..
T Consensus 281 ~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~-~~~-Ts~~~IyA~GD~~~g 358 (519)
T 3qfa_A 281 AGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTD-EEQ-TNVPYIYAIGDILED 358 (519)
T ss_dssp CCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCT-TSB-CSSTTEEECGGGBSS
T ss_pred CCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCC-CCc-cCCCCEEEEEeccCC
Confidence 22 333322222 3578999999999999954 556677 55 589999999 688 899999999999953
Q ss_pred CCCchHHHHHHhHHHHHHHHHHHHcCCCCCCcccceeeEE
Q psy8791 364 PTSKTAAAVAGQCKVVYDNLSAVMKNRALPHEYNGYTSCP 403 (706)
Q Consensus 364 ~~~~~~~~a~~qg~~~a~ni~~~l~g~~~~~~~~~~~~~~ 403 (706)
.++++..|..||+++|+||. .+......|.....|.
T Consensus 359 -~~~~~~~A~~~g~~aa~~i~---g~~~~~~~~~~~p~~~ 394 (519)
T 3qfa_A 359 -KVELTPVAIQAGRLLAQRLY---AGSTVKCDYENVPTTV 394 (519)
T ss_dssp -SCCCHHHHHHHHHHHHHHHH---SCCCCCCCCTTCCEEE
T ss_pred -CCccHHHHHHHHHHHHHHHc---CCCCccCCCCcCcEEE
Confidence 25688899999999999995 2222234455544443
No 60
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.95 E-value=9e-27 Score=256.51 Aligned_cols=278 Identities=14% Similarity=0.158 Sum_probs=194.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCc-------c---------------cccc----cCccccC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQP-------M---------------FTLI----GGGMKKL 83 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p-------~---------------~~~~----~~~~~~~ 83 (706)
++||+|||||+||++||.+|+++ |++|+|||++.. ...+ . .+.+ .....+.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~--G~~V~liEk~~~-GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAAL--GKKVAIAEEFRY-GGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDW 81 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT--TCCEEEEESSCT-THHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECH
T ss_pred CCcEEEECcCHHHHHHHHHHHhC--CCEEEEEeCCCC-CCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCH
Confidence 57999999999999999999999 899999999432 1100 0 0000 0000000
Q ss_pred cc-----------ccccccccc-CCCcEEEEceeEEEEcCCCEEEe-CCCeEEEecEEEEccccccc-cCCCCCCccccc
Q psy8791 84 SD-----------SRRPMKSVL-PSGATWVKDKIVSFDPENNRVRT-QAGSEISYEYMIVASGIQMY-YDRVKGPSALIN 149 (706)
Q Consensus 84 ~~-----------~~~~~~~~~-~~~v~~i~~~v~~id~~~~~v~~-~~g~~~~yd~lviAtG~~~~-~~~~~g~~~~~~ 149 (706)
.. +...+..++ ..+++++.+++..++ .+.+.+ .++.++.||+||+|||+.+. .|.+||.+ +
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~--~~~v~~~~~~~~~~~d~lviAtG~~p~~~p~i~G~~---~ 156 (463)
T 4dna_A 82 AKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAG--PNTVKLLASGKTVTAERIVIAVGGHPSPHDALPGHE---L 156 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESS--SSEEEETTTTEEEEEEEEEECCCEEECCCTTSTTGG---G
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEee--CCEEEEecCCeEEEeCEEEEecCCCcccCCCCCCcc---c
Confidence 00 000011111 248999999888775 356777 57788999999999999998 88899821 0
Q ss_pred ccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCC
Q psy8791 150 ALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGG 229 (706)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g 229 (706)
... ..+.+.. ... ++.+ +.++|
T Consensus 157 ~~~----------------------------~~~~~~~---------------------~~~--~~~v-------~ViGg 178 (463)
T 4dna_A 157 CIT----------------------------SNEAFDL---------------------PAL--PESI-------LIAGG 178 (463)
T ss_dssp CBC----------------------------HHHHTTC---------------------SSC--CSEE-------EEECC
T ss_pred ccc----------------------------HHHHhhh---------------------hcC--CCeE-------EEECC
Confidence 000 1111110 001 1111 22334
Q ss_pred hhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEe-CCC
Q psy8791 230 APMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKS-EDK 306 (706)
Q Consensus 230 ~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~-~~~ 306 (706)
+.. +......+.+.|. +|+++++.+.+++ ++.+.+.+.+.|++.||++++++.|.+++.+++.+..+. +++
T Consensus 179 G~~--g~e~A~~l~~~g~----~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~ 252 (463)
T 4dna_A 179 GYI--AVEFANIFHGLGV----KTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKH 252 (463)
T ss_dssp SHH--HHHHHHHHHHTTC----EEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSS
T ss_pred CHH--HHHHHHHHHHcCC----eEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCC
Confidence 322 2223334566664 5999999988876 788999999999999999999999999987643322334 557
Q ss_pred ceEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHH
Q psy8791 307 TERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDN 382 (706)
Q Consensus 307 g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~n 382 (706)
|+ +++|.||+|+|.+|+.. +.+.++ .+++|++.||+ +++ |+.|||||+|||+.. ++++..|..||+++|+|
T Consensus 253 g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~-~~~-t~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~ 327 (463)
T 4dna_A 253 GE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDA-FSR-TSTPGIYALGDVTDR--VQLTPVAIHEAMCFIET 327 (463)
T ss_dssp CE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCT-TCB-CSSTTEEECSGGGSS--CCCHHHHHHHHHHHHHH
T ss_pred Ce-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECc-CCC-CCCCCEEEEEecCCC--CCChHHHHHHHHHHHHH
Confidence 77 99999999999999955 566788 78899999999 688 999999999999985 56888999999999999
Q ss_pred HH
Q psy8791 383 LS 384 (706)
Q Consensus 383 i~ 384 (706)
|.
T Consensus 328 i~ 329 (463)
T 4dna_A 328 EY 329 (463)
T ss_dssp HH
T ss_pred Hc
Confidence 95
No 61
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.95 E-value=5.6e-27 Score=247.24 Aligned_cols=295 Identities=19% Similarity=0.177 Sum_probs=193.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcc---cCcccccccCc--cccCccccccccccc-CCCcEEE
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHY---YQPMFTLIGGG--MKKLSDSRRPMKSVL-PSGATWV 101 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~---~~p~~~~~~~~--~~~~~~~~~~~~~~~-~~~v~~i 101 (706)
..+++|+|||||+||+++|..|++. +++|+|||++.... +.......+.. ......+...+.+.. +.+++++
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~ 89 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARA--QLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLR 89 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHT--TCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEE
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEE
Confidence 3457999999999999999999998 89999999753210 00000000000 001111222222222 3688998
Q ss_pred EceeEEEEcCC-CEE-EeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCcc
Q psy8791 102 KDKIVSFDPEN-NRV-RTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPS 179 (706)
Q Consensus 102 ~~~v~~id~~~-~~v-~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (706)
.++|++++... .+| .+.++.++.||+||+|||+.+..+.+||.
T Consensus 90 ~~~v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~~~~i~g~----------------------------------- 134 (335)
T 2a87_A 90 MEDVESVSLHGPLKSVVTADGQTHRARAVILAMGAAARYLQVPGE----------------------------------- 134 (335)
T ss_dssp CCCEEEEECSSSSEEEEETTSCEEEEEEEEECCCEEECCCCCTHH-----------------------------------
T ss_pred EeeEEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCccCCCCCch-----------------------------------
Confidence 88899998732 256 77788889999999999999888888882
Q ss_pred chhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCC
Q psy8791 180 GLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGM 259 (706)
Q Consensus 180 ~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~ 259 (706)
..... . .+... .... ..+ ..+.+++ .++++.. ..++ ...+.+.+ .+|+++++.
T Consensus 135 --~~~~~-~--~~~~~---~~~~---~~~--~~~~~v~--------ViG~G~~-g~e~-a~~l~~~g----~~V~l~~~~ 187 (335)
T 2a87_A 135 --QELLG-R--GVSSC---ATCD---GFF--FRDQDIA--------VIGGGDS-AMEE-ATFLTRFA----RSVTLVHRR 187 (335)
T ss_dssp --HHTBT-T--TEESC---HHHH---GGG--GTTCEEE--------EECSSHH-HHHH-HHHHTTTC----SEEEEECSS
T ss_pred --HhccC-C--ceEEe---eccc---hhh--cCCCEEE--------EECCCHH-HHHH-HHHHHHhC----CeEEEEEcC
Confidence 11100 0 11110 0000 000 1222222 2333322 1222 22344444 369999988
Q ss_pred CcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCC--EEEEEeCCCc--eEEeecEEEECCCCCchhhhhcCCC-CC
Q psy8791 260 GVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANK--EAVFKSEDKT--ERLPYAIMHVTPPMGPVPELATSRL-VD 334 (706)
Q Consensus 260 ~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~--~v~~~~~~~g--~~i~~D~vI~a~G~~~~~~~~~~~l-~~ 334 (706)
+.+...+.+. ++.+++.||++++++++.+++.+++ .+.+....+| +++++|.||+|+|++|+..+.+.++ .+
T Consensus 188 ~~~~~~~~~~---~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~ 264 (335)
T 2a87_A 188 DEFRASKIML---DRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVREAIDVD 264 (335)
T ss_dssp SSCSSCTTHH---HHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTTBTTBCBC
T ss_pred CcCCccHHHH---HHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccChhHhhcccccC
Confidence 8765433322 2445779999999999999987653 3555432233 6899999999999999965555566 67
Q ss_pred CCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCCC
Q psy8791 335 QSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNRA 391 (706)
Q Consensus 335 ~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~~ 391 (706)
++|++.||+ +++.|+.|||||+|||+..+ ++++..|..||+.+|.||.+.+.+++
T Consensus 265 ~~G~i~vd~-~~~~t~~~~iya~GD~~~~~-~~~~~~A~~~g~~aA~~i~~~l~~~~ 319 (335)
T 2a87_A 265 PDGYVLVQG-RTTSTSLPGVFAAGDLVDRT-YRQAVTAAGSGCAAAIDAERWLAEHA 319 (335)
T ss_dssp TTSCBCCST-TSSBCSSTTEEECGGGTCCS-CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccEEeCC-CCCccCCCCEEEeeecCCcc-HHHHHHHHHhHHHHHHHHHHHhhcCc
Confidence 789999998 45559999999999999864 46788999999999999999997654
No 62
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.95 E-value=1.6e-26 Score=255.62 Aligned_cols=282 Identities=14% Similarity=0.134 Sum_probs=195.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC------ccc------------ccc-cCccc------cC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ------PMF------------TLI-GGGMK------KL 83 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~------p~~------------~~~-~~~~~------~~ 83 (706)
.++||+|||||+||++||..|++. +++|+|||++.....+ |.. ... ..+.. +.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~--G~~V~liE~~~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 96 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL--GARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNW 96 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCH
Confidence 458999999999999999999999 8999999987531000 000 000 00000 00
Q ss_pred cc-----------cccccccc-cCCCcEEEEceeEEEEcCCCEEEeCCCeEEEecEEEEccccccccC---CCCCCcccc
Q psy8791 84 SD-----------SRRPMKSV-LPSGATWVKDKIVSFDPENNRVRTQAGSEISYEYMIVASGIQMYYD---RVKGPSALI 148 (706)
Q Consensus 84 ~~-----------~~~~~~~~-~~~~v~~i~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~---~~~g~~~~~ 148 (706)
.. +...+... ...+++++.+++..+++....+. .++.++.||+||+|||+.+..| ++||.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~-~~g~~~~~d~lviAtG~~p~~p~~~~i~G~~--- 172 (478)
T 3dk9_A 97 RVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIE-VSGKKYTAPHILIATGGMPSTPHESQIPGAS--- 172 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEE-ETTEEEECSCEEECCCEEECCCCTTTSTTGG---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEE-ECCEEEEeeEEEEccCCCCCCCCcCCCCCCc---
Confidence 00 00001111 12589999999988888777777 4567899999999999999888 888821
Q ss_pred cccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeC
Q psy8791 149 NALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCG 228 (706)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~ 228 (706)
+... ....+.. ... ..++ +.++
T Consensus 173 ~~~~----------------------------~~~~~~~---------------------~~~-~~~v--------vViG 194 (478)
T 3dk9_A 173 LGIT----------------------------SDGFFQL---------------------EEL-PGRS--------VIVG 194 (478)
T ss_dssp GSBC----------------------------HHHHTTC---------------------CSC-CSEE--------EEEC
T ss_pred eeEc----------------------------hHHhhch---------------------hhc-CccE--------EEEC
Confidence 0000 1111110 011 1111 2234
Q ss_pred ChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCC--EEEEEeC
Q psy8791 229 GAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANK--EAVFKSE 304 (706)
Q Consensus 229 g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~--~v~~~~~ 304 (706)
|+.. +......+.+.|. +|+++++.+.+++ ++.+.+.+.+.|++.||++++++.|.+++.+++ .+.+...
T Consensus 195 gG~~--g~E~A~~l~~~g~----~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~ 268 (478)
T 3dk9_A 195 AGYI--AVEMAGILSALGS----KTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTA 268 (478)
T ss_dssp CSHH--HHHHHHHHHHTTC----EEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEEC
T ss_pred CCHH--HHHHHHHHHHcCC----eEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEc
Confidence 4422 2233345666664 5999999998876 688999999999999999999999999986432 2333322
Q ss_pred CC------ceEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHH
Q psy8791 305 DK------TERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAG 374 (706)
Q Consensus 305 ~~------g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~ 374 (706)
+. |+++++|.||+|+|.+|+.. +...++ .+++|+|.||+ +++ |+.|||||+|||+.. ++++..|..
T Consensus 269 ~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~-~~~-t~~~~IyA~GD~~~~--~~~~~~A~~ 344 (478)
T 3dk9_A 269 VPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDE-FQN-TNVKGIYAVGDVCGK--ALLTPVAIA 344 (478)
T ss_dssp CTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCT-TCB-CSSTTEEECGGGGCS--SCCHHHHHH
T ss_pred cCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCC-Ccc-cCCCCEEEEEecCCC--CccHhHHHH
Confidence 21 36899999999999999954 566788 77899999999 677 899999999999954 568889999
Q ss_pred hHHHHHHHHH
Q psy8791 375 QCKVVYDNLS 384 (706)
Q Consensus 375 qg~~~a~ni~ 384 (706)
||+++|+||.
T Consensus 345 ~g~~aa~~i~ 354 (478)
T 3dk9_A 345 AGRKLAHRLF 354 (478)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 9999999995
No 63
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.95 E-value=1.4e-26 Score=254.90 Aligned_cols=279 Identities=19% Similarity=0.238 Sum_probs=192.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-------cccccc-------------cCcc-----ccCc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-------PMFTLI-------------GGGM-----KKLS 84 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~~~~~-------------~~~~-----~~~~ 84 (706)
++||+|||||+||++||.+|++. +.+|+|||+++. ... |..... ..+. .+..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~--g~~V~lie~~~~-GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQL--GLKVLAVEAGEV-GGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCT-THHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCCC-CCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHH
Confidence 47899999999999999999998 899999999872 110 110000 0000 0000
Q ss_pred cccc-----------cccccc-CCCcEEEEceeEEEEcCCCEEEeCCCeEEEecEEEEccccccccCC-CCCCccccccc
Q psy8791 85 DSRR-----------PMKSVL-PSGATWVKDKIVSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDR-VKGPSALINAL 151 (706)
Q Consensus 85 ~~~~-----------~~~~~~-~~~v~~i~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~-~~g~~~~~~~~ 151 (706)
.+.. .+..++ ..+++++.++++.+++ ++|.+. |.++.||+||+|||+.+..|+ +|+. +
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~--~~v~v~-g~~~~~d~lViATGs~p~~p~gi~~~---~--- 153 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGP--KEVEVG-GERYGAKSLILATGSEPLELKGFPFG---E--- 153 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--TEEEET-TEEEEEEEEEECCCEEECCBTTBCCS---S---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccC--CEEEEc-cEEEEeCEEEEcCCCCCCCCCCCCCC---C---
Confidence 0100 011122 2689999988877764 577776 678999999999999887765 5540 0
Q ss_pred ccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChh
Q psy8791 152 GHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAP 231 (706)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~ 231 (706)
.+ ++.+++.. +......++ +.++|+.
T Consensus 154 ---------------------------------------~v---~~~~~~~~----l~~~~~~~v--------vViGgG~ 179 (464)
T 2eq6_A 154 ---------------------------------------DV---WDSTRALK----VEEGLPKRL--------LVIGGGA 179 (464)
T ss_dssp ---------------------------------------SE---ECHHHHTC----GGGCCCSEE--------EEECCSH
T ss_pred ---------------------------------------cE---EcHHHHHh----hhhhcCCEE--------EEECCCH
Confidence 00 01111100 111111122 2234443
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCC--c
Q psy8791 232 MKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDK--T 307 (706)
Q Consensus 232 ~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~--g 307 (706)
. +......+++.|. +|+++++.+.+++ ++.+.+.+++.|++.||+++++++|.+++.+++.+.+...++ |
T Consensus 180 ~--g~e~A~~l~~~g~----~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g 253 (464)
T 2eq6_A 180 V--GLELGQVYRRLGA----EVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGG 253 (464)
T ss_dssp H--HHHHHHHHHHTTC----EEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCC
T ss_pred H--HHHHHHHHHHCCC----eEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCC
Confidence 2 2233345666664 5999999988876 688999999999999999999999999987655444332213 5
Q ss_pred e--EEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHH
Q psy8791 308 E--RLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYD 381 (706)
Q Consensus 308 ~--~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ 381 (706)
+ ++++|.||+|+|.+|+.. +...++ .+++|+|.||+ ++| |+.|+|||+|||+.. ++++..|..||+.+|+
T Consensus 254 ~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~-~~~-t~~~~Iya~GD~~~~--~~l~~~A~~~g~~aa~ 329 (464)
T 2eq6_A 254 EGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNA-RME-TSVPGVYAIGDAARP--PLLAHKAMREGLIAAE 329 (464)
T ss_dssp SCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCT-TCB-CSSTTEEECGGGTCS--SCCHHHHHHHHHHHHH
T ss_pred ceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECC-Ccc-cCCCCEEEEeccCCC--cccHHHHHHHHHHHHH
Confidence 5 899999999999999954 456677 67789999999 688 899999999999986 4578899999999999
Q ss_pred HHH
Q psy8791 382 NLS 384 (706)
Q Consensus 382 ni~ 384 (706)
||.
T Consensus 330 ~i~ 332 (464)
T 2eq6_A 330 NAA 332 (464)
T ss_dssp HHT
T ss_pred Hhc
Confidence 995
No 64
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.95 E-value=1.7e-26 Score=255.65 Aligned_cols=278 Identities=15% Similarity=0.188 Sum_probs=194.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCccc----c------------------cccC----ccccC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMF----T------------------LIGG----GMKKL 83 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~----~------------------~~~~----~~~~~ 83 (706)
++||+|||||+||++||.+|+++ |++|+|||++.. ...+.. | .... ...+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~--G~~V~liEk~~~-GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 102 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGAL--GKRVAIAEEYRI-GGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNW 102 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCT-THHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECH
T ss_pred CCCEEEECcCHHHHHHHHHHHhC--cCEEEEEeCCCC-CCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCH
Confidence 47999999999999999999999 899999999542 111000 0 0000 00000
Q ss_pred cc-----------ccccccccc-CCCcEEEEceeEEEEcCCCEEEeC-CCeEEEecEEEEccccccc-cCCCCCCccccc
Q psy8791 84 SD-----------SRRPMKSVL-PSGATWVKDKIVSFDPENNRVRTQ-AGSEISYEYMIVASGIQMY-YDRVKGPSALIN 149 (706)
Q Consensus 84 ~~-----------~~~~~~~~~-~~~v~~i~~~v~~id~~~~~v~~~-~g~~~~yd~lviAtG~~~~-~~~~~g~~~~~~ 149 (706)
.. +...+...+ ..+++++.+++..++. +.+.+. ++.++.||++|+|||+.+. .|.+||.+ +
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~--~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~G~~---~ 177 (484)
T 3o0h_A 103 EKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDE--HTLELSVTGERISAEKILIATGAKIVSNSAIKGSD---L 177 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--TEEEETTTCCEEEEEEEEECCCEEECCC--CBTGG---G
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeC--CEEEEecCCeEEEeCEEEEccCCCcccCCCCCCcc---c
Confidence 00 000111112 2689999999988875 467776 7778999999999999998 88888821 0
Q ss_pred ccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCC
Q psy8791 150 ALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGG 229 (706)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g 229 (706)
... ....+.. ... ++.+ +.++|
T Consensus 178 ~~~----------------------------~~~~~~~---------------------~~~--~~~v-------~ViGg 199 (484)
T 3o0h_A 178 CLT----------------------------SNEIFDL---------------------EKL--PKSI-------VIVGG 199 (484)
T ss_dssp SBC----------------------------TTTGGGC---------------------SSC--CSEE-------EEECC
T ss_pred ccc----------------------------HHHHHhH---------------------Hhc--CCcE-------EEECc
Confidence 000 0000000 000 1111 22333
Q ss_pred hhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCc
Q psy8791 230 APMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKT 307 (706)
Q Consensus 230 ~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g 307 (706)
+.. +......+.+.|. +++++++.+.+++ ++.+.+.+.+.+++.||+++++++|++++.+++.+.+ .+++|
T Consensus 200 G~~--g~e~A~~l~~~g~----~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v-~~~~g 272 (484)
T 3o0h_A 200 GYI--GVEFANIFHGLGV----KTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNV-VLTNG 272 (484)
T ss_dssp SHH--HHHHHHHHHHTTC----EEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEE-EETTS
T ss_pred CHH--HHHHHHHHHHcCC----eEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEE-EECCC
Confidence 322 2223344566664 5999999988876 7889999999999999999999999999876554544 34578
Q ss_pred eEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHH
Q psy8791 308 ERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNL 383 (706)
Q Consensus 308 ~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni 383 (706)
+++++|.||+|+|.+|+.. +...++ .+++|++.||+ +++ |+.|||||+|||+.. ++++..|..||+++|+||
T Consensus 273 ~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~-~~~-t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i 348 (484)
T 3o0h_A 273 QTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDE-KMT-TNVSHIWAVGDVTGH--IQLTPVAIHDAMCFVKNA 348 (484)
T ss_dssp CEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCT-TSB-CSSTTEEECGGGGTS--CCCHHHHHHHHHHHHHHH
T ss_pred cEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECC-CCC-CCCCCEEEEEecCCC--CcCHHHHHHHHHHHHHHH
Confidence 8999999999999999955 556787 78889999999 688 999999999999985 468889999999999999
Q ss_pred H
Q psy8791 384 S 384 (706)
Q Consensus 384 ~ 384 (706)
.
T Consensus 349 ~ 349 (484)
T 3o0h_A 349 F 349 (484)
T ss_dssp H
T ss_pred c
Confidence 6
No 65
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.94 E-value=1.3e-26 Score=256.33 Aligned_cols=299 Identities=17% Similarity=0.192 Sum_probs=199.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-------------ccc---------cccc--Cccc--c
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-------------PMF---------TLIG--GGMK--K 82 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-------------p~~---------~~~~--~~~~--~ 82 (706)
.++||+|||||+||++||.+|++. |++|+|||+++..... |.. .... .... .
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~--G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~ 79 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQL--GLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGIS 79 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH--TCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC--CCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 358999999999999999999999 8999999998621100 100 0000 0000 0
Q ss_pred Ccccccc------------------ccccc-CCCcEEEEceeEEEEcCCCEEEeCCC--eEEEecEEEEccccccccCCC
Q psy8791 83 LSDSRRP------------------MKSVL-PSGATWVKDKIVSFDPENNRVRTQAG--SEISYEYMIVASGIQMYYDRV 141 (706)
Q Consensus 83 ~~~~~~~------------------~~~~~-~~~v~~i~~~v~~id~~~~~v~~~~g--~~~~yd~lviAtG~~~~~~~~ 141 (706)
......+ +..++ ..+++++.+++..+++....|...+| .++.||+||+|||+.+..++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~~~ 159 (476)
T 3lad_A 80 TGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPP 159 (476)
T ss_dssp CSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECCCTT
T ss_pred cCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCCCC
Confidence 0000000 11111 25799999998888877667777777 578999999999998875544
Q ss_pred CCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhc-cCCCEEEec
Q psy8791 142 KGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHF-QSGPVLYTF 220 (706)
Q Consensus 142 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~-~~g~~vv~~ 220 (706)
++.+ .. .+. +...+ ... ..++.+
T Consensus 160 ~~~~-----------------------~~--------------------~v~---~~~~~-------~~~~~~~~~v--- 183 (476)
T 3lad_A 160 APVD-----------------------QD--------------------VIV---DSTGA-------LDFQNVPGKL--- 183 (476)
T ss_dssp SCCC-----------------------SS--------------------SEE---EHHHH-------TSCSSCCSEE---
T ss_pred CCCC-----------------------cc--------------------cEE---echhh-------hccccCCCeE---
Confidence 4311 00 000 00000 000 011111
Q ss_pred CCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCE
Q psy8791 221 PATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKE 298 (706)
Q Consensus 221 ~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~ 298 (706)
+.++|+.. +......+.+.|. +|+++++.+.+++ ++.+.+.+++.|++.||+++++++|.+++.+++.
T Consensus 184 ----~ViGgG~~--g~e~A~~l~~~g~----~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~ 253 (476)
T 3lad_A 184 ----GVIGAGVI--GLELGSVWARLGA----EVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQ 253 (476)
T ss_dssp ----EEECCSHH--HHHHHHHHHHTTC----EEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSC
T ss_pred ----EEECCCHH--HHHHHHHHHHcCC----cEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCE
Confidence 22334422 2223344666664 5999999998886 7889999999999999999999999999866554
Q ss_pred EEEEeC-CCc-eEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHH
Q psy8791 299 AVFKSE-DKT-ERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAV 372 (706)
Q Consensus 299 v~~~~~-~~g-~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a 372 (706)
+.+... .+| +++++|.||+|+|.+|+.. +...++ .+++|+|.||+ +++ |+.|||||+|||+.. |.++..|
T Consensus 254 ~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~-~~~-t~~~~Iya~GD~~~~--~~~~~~A 329 (476)
T 3lad_A 254 VTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDD-YCA-TSVPGVYAIGDVVRG--AMLAHKA 329 (476)
T ss_dssp EEEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCT-TSB-CSSTTEEECGGGSSS--CCCHHHH
T ss_pred EEEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCC-Ccc-cCCCCEEEEEccCCC--cccHHHH
Confidence 433222 133 6899999999999999953 456677 77889999999 688 899999999999965 4588999
Q ss_pred HHhHHHHHHHHHHHHcCCCCCCcccceeeEE
Q psy8791 373 AGQCKVVYDNLSAVMKNRALPHEYNGYTSCP 403 (706)
Q Consensus 373 ~~qg~~~a~ni~~~l~g~~~~~~~~~~~~~~ 403 (706)
..||+++|+||. |++.++.|.....|+
T Consensus 330 ~~~g~~aa~~i~----g~~~~~~~~~~p~~~ 356 (476)
T 3lad_A 330 SEEGVVVAERIA----GHKAQMNYDLIPAVI 356 (476)
T ss_dssp HHHHHHHHHHHH----HCCCCCCTTCCCEEE
T ss_pred HHHHHHHHHHhc----CCCcccCCCCCCEEE
Confidence 999999999996 333334455444443
No 66
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.94 E-value=1e-25 Score=249.39 Aligned_cols=299 Identities=14% Similarity=0.170 Sum_probs=195.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc-------ccC---------ccc---------------ccc
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH-------YYQ---------PMF---------------TLI 76 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~-------~~~---------p~~---------------~~~ 76 (706)
...+||+|||||+||++||.+|++. |++|+|||+++.. .+. |.. ..+
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~--G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~ 84 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLN--GARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAY 84 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHT--TCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC--CCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhc
Confidence 3468999999999999999999998 8999999953210 010 100 000
Q ss_pred --cCc---cccCccccc-----------cccc-ccCCCcEEEEceeEEEEcCCCEEEeCCCe-EEEecEEEEcccccccc
Q psy8791 77 --GGG---MKKLSDSRR-----------PMKS-VLPSGATWVKDKIVSFDPENNRVRTQAGS-EISYEYMIVASGIQMYY 138 (706)
Q Consensus 77 --~~~---~~~~~~~~~-----------~~~~-~~~~~v~~i~~~v~~id~~~~~v~~~~g~-~~~yd~lviAtG~~~~~ 138 (706)
... ..+...+.. .+.. +...+++++.+++..+++....|.+.+|. ++.||+||+|||+.+..
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~p~~ 164 (483)
T 3dgh_A 85 GWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRY 164 (483)
T ss_dssp TBCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEECCCEEECC
T ss_pred CcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCCcCC
Confidence 000 000000000 0001 12368999999998888776667666664 79999999999999999
Q ss_pred CCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEE
Q psy8791 139 DRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLY 218 (706)
Q Consensus 139 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv 218 (706)
|++||.+ ... .+.+.+.. +... ..++
T Consensus 165 p~i~G~~-------------------------------------~~~----------~~~~~~~~----~~~~-~~~v-- 190 (483)
T 3dgh_A 165 PDIPGAV-------------------------------------EYG----------ITSDDLFS----LDRE-PGKT-- 190 (483)
T ss_dssp CSSTTHH-------------------------------------HHC----------BCHHHHTT----CSSC-CCEE--
T ss_pred CCCCCcc-------------------------------------ccc----------CcHHHHhh----hhhc-CCcE--
Confidence 9999921 100 01111000 0011 1111
Q ss_pred ecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCC
Q psy8791 219 TFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLAN 296 (706)
Q Consensus 219 ~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~ 296 (706)
+.++|+.. +......+.+.|. +|+++++. .+++ ++++.+.+.+.|++.||++++++.+.+++.++
T Consensus 191 ------vViGgG~~--g~E~A~~l~~~g~----~Vtlv~~~-~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~ 257 (483)
T 3dgh_A 191 ------LVVGAGYI--GLECAGFLKGLGY----EPTVMVRS-IVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQD 257 (483)
T ss_dssp ------EEECCSHH--HHHHHHHHHHTTC----EEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCCEEETEEEEEEEECT
T ss_pred ------EEECCCHH--HHHHHHHHHHcCC----EEEEEeCC-CCCcccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC
Confidence 22334322 2233345666664 59999874 4554 78899999999999999999999999998643
Q ss_pred -CE--EEEEeCCC--ceEEeecEEEECCCCCchh-hh--hcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCc
Q psy8791 297 -KE--AVFKSEDK--TERLPYAIMHVTPPMGPVP-EL--ATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSK 367 (706)
Q Consensus 297 -~~--v~~~~~~~--g~~i~~D~vI~a~G~~~~~-~~--~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~ 367 (706)
+. +.+...++ ..++++|.||+|+|.+|+. .+ ...++ .++ |+|.||+ +++ |+.|||||+|||+.. .|+
T Consensus 258 ~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd~-~~~-t~~~~IyA~GD~~~~-~~~ 333 (483)
T 3dgh_A 258 DGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDS-QEA-TNVANIYAVGDIIYG-KPE 333 (483)
T ss_dssp TSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBT-TBBCCCT-TCB-CSSTTEEECSTTBTT-SCC
T ss_pred CCcEEEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccC-CEEEECc-CCc-cCCCCEEEEEcccCC-CCc
Confidence 22 44433221 2379999999999999994 33 56787 555 9999999 677 899999999999853 356
Q ss_pred hHHHHHHhHHHHHHHHHHHHcCCC-CCCcccceeeEE
Q psy8791 368 TAAAVAGQCKVVYDNLSAVMKNRA-LPHEYNGYTSCP 403 (706)
Q Consensus 368 ~~~~a~~qg~~~a~ni~~~l~g~~-~~~~~~~~~~~~ 403 (706)
++..|..||+++|+||. |.. ....|.....|+
T Consensus 334 ~~~~A~~~g~~aa~~i~----g~~~~~~~~~~~p~~~ 366 (483)
T 3dgh_A 334 LTPVAVLAGRLLARRLY----GGSTQRMDYKDVATTV 366 (483)
T ss_dssp CHHHHHHHHHHHHHHHH----SCCCCCCCCTTCCEEE
T ss_pred cHHHHHHHHHHHHHHHc----CCCCCcCCCCCCCEEE
Confidence 88899999999999995 332 234555544443
No 67
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.94 E-value=1e-25 Score=249.76 Aligned_cols=284 Identities=15% Similarity=0.168 Sum_probs=191.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC--------cccC-------ccc---------------ccccC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD--------HYYQ-------PMF---------------TLIGG 78 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~--------~~~~-------p~~---------------~~~~~ 78 (706)
.++||+|||||+||++||.+|++. |.+|+|||+++. .... |.. ..+..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~--G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 82 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQL--GKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGW 82 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC--CCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCc
Confidence 457999999999999999999998 899999997321 1110 000 00000
Q ss_pred -----ccccCcccccc-----------ccc-ccCCCcEEEEceeEEEEcCCCEEEeCCC--eEEEecEEEEccccccccC
Q psy8791 79 -----GMKKLSDSRRP-----------MKS-VLPSGATWVKDKIVSFDPENNRVRTQAG--SEISYEYMIVASGIQMYYD 139 (706)
Q Consensus 79 -----~~~~~~~~~~~-----------~~~-~~~~~v~~i~~~v~~id~~~~~v~~~~g--~~~~yd~lviAtG~~~~~~ 139 (706)
...+...+... +.. +...+++++.+++..+++....|...+| .++.||+||+|||+.+..|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~p 162 (488)
T 3dgz_A 83 EVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYP 162 (488)
T ss_dssp CCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEECCC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCCCC
Confidence 00000000000 111 1226899999999888876666666666 5799999999999999988
Q ss_pred C-CCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEE
Q psy8791 140 R-VKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLY 218 (706)
Q Consensus 140 ~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv 218 (706)
+ +||.+ ++. .+.+.+.. +... .+++
T Consensus 163 ~~i~G~~--~~~---------------------------------------------~~~~~~~~----~~~~-~~~v-- 188 (488)
T 3dgz_A 163 TQVKGAL--EYG---------------------------------------------ITSDDIFW----LKES-PGKT-- 188 (488)
T ss_dssp SSCBTHH--HHC---------------------------------------------BCHHHHTT----CSSC-CCSE--
T ss_pred CCCCCcc--ccc---------------------------------------------CcHHHHHh----hhhc-CCeE--
Confidence 8 99921 000 00111000 0011 1122
Q ss_pred ecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCC-
Q psy8791 219 TFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLA- 295 (706)
Q Consensus 219 ~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~- 295 (706)
+.++|+.. +......+.+.|. +|+++++.. +++ ++++.+.+.+.|++.||++++++.+.+++..
T Consensus 189 ------vViGgG~i--g~E~A~~l~~~g~----~Vtlv~~~~-~l~~~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~ 255 (488)
T 3dgz_A 189 ------LVVGASYV--ALECAGFLTGIGL----DTTVMMRSI-PLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLP 255 (488)
T ss_dssp ------EEECCSHH--HHHHHHHHHHTTC----CEEEEESSC-SSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEECT
T ss_pred ------EEECCCHH--HHHHHHHHHHcCC----ceEEEEcCc-ccccCCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcC
Confidence 22344322 2233345666664 389998764 444 6889999999999999999999999999752
Q ss_pred CC--EEEEEeCCCce--EEeecEEEECCCCCchhh---hhcCCC-CC-CCCceeeCccccccCCCCCEEEccccCCCCCC
Q psy8791 296 NK--EAVFKSEDKTE--RLPYAIMHVTPPMGPVPE---LATSRL-VD-QSGYVNVDKATLQHVKYSNVFAIGDCSNLPTS 366 (706)
Q Consensus 296 ~~--~v~~~~~~~g~--~i~~D~vI~a~G~~~~~~---~~~~~l-~~-~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~ 366 (706)
++ .+.+...++|+ ++++|.||+|+|.+|+.. +...++ .+ ++|+|.||+ ++| |+.|||||+|||+.. .+
T Consensus 256 ~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~-~~~-t~~~~IyA~GD~~~~-~~ 332 (488)
T 3dgz_A 256 TNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDA-QEA-TSVPHIYAIGDVAEG-RP 332 (488)
T ss_dssp TSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCT-TSB-CSSTTEEECGGGBTT-CC
T ss_pred CCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECC-CCc-cCCCCEEEeEEecCC-CC
Confidence 23 24444333355 579999999999999954 456677 66 789999998 688 899999999999853 35
Q ss_pred chHHHHHHhHHHHHHHHH
Q psy8791 367 KTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 367 ~~~~~a~~qg~~~a~ni~ 384 (706)
+++..|..||+++|+||.
T Consensus 333 ~~~~~A~~~g~~aa~~i~ 350 (488)
T 3dgz_A 333 ELTPTAIKAGKLLAQRLF 350 (488)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHc
Confidence 688899999999999995
No 68
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.94 E-value=2.4e-26 Score=254.45 Aligned_cols=285 Identities=18% Similarity=0.165 Sum_probs=190.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCccc----c----------------cc-cCccccCccccc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMF----T----------------LI-GGGMKKLSDSRR 88 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~----~----------------~~-~~~~~~~~~~~~ 88 (706)
++||+|||||+||++||..|++. +++|+|||+++.....+.. | .. ..+.........
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~ 82 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQL--GFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKI 82 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCcc
Confidence 47999999999999999999998 8999999997643211000 0 00 000000000000
Q ss_pred c------------------cccc-cCCCcEEEEceeEEEEcCCCEEEeCCC--eE------EEecEEEEccccccccCCC
Q psy8791 89 P------------------MKSV-LPSGATWVKDKIVSFDPENNRVRTQAG--SE------ISYEYMIVASGIQMYYDRV 141 (706)
Q Consensus 89 ~------------------~~~~-~~~~v~~i~~~v~~id~~~~~v~~~~g--~~------~~yd~lviAtG~~~~~~~~ 141 (706)
+ +... ...+++++.++...++.....|.+.+| .+ +.||+||+|||+.+. .+
T Consensus 83 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~--~~ 160 (478)
T 1v59_A 83 NVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVT--PF 160 (478)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEEC--CC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEECcCCCCC--CC
Confidence 0 1111 236899988776655443334555566 46 999999999999873 45
Q ss_pred CCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecC
Q psy8791 142 KGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFP 221 (706)
Q Consensus 142 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~ 221 (706)
||.+ +... .+ .+.+.+.. +... ..+
T Consensus 161 ~g~~---------------------~~~~--------------------~v---~~~~~~~~----~~~~-~~~------ 185 (478)
T 1v59_A 161 PGIE---------------------IDEE--------------------KI---VSSTGALS----LKEI-PKR------ 185 (478)
T ss_dssp TTCC---------------------CCSS--------------------SE---ECHHHHTT----CSSC-CSE------
T ss_pred CCCC---------------------CCCc--------------------eE---EcHHHHHh----hhcc-Cce------
Confidence 6621 0000 00 11111110 0011 111
Q ss_pred CCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeC--CCC
Q psy8791 222 ATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDL--ANK 297 (706)
Q Consensus 222 ~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~~ 297 (706)
.+.++|+.. +......+++.|. +|+++++.+.+++ ++.+.+.+.+.|++.||+++++++|.+++. +++
T Consensus 186 --vvViGgG~~--g~e~A~~l~~~g~----~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~ 257 (478)
T 1v59_A 186 --LTIIGGGII--GLEMGSVYSRLGS----KVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKN 257 (478)
T ss_dssp --EEEECCSHH--HHHHHHHHHHTTC----EEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTT
T ss_pred --EEEECCCHH--HHHHHHHHHHcCC----EEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCC
Confidence 122344432 2233345666664 5999999998886 688999999999999999999999999986 444
Q ss_pred EEEEEeC----CCceEEeecEEEECCCCCchh---hhhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchH
Q psy8791 298 EAVFKSE----DKTERLPYAIMHVTPPMGPVP---ELATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTA 369 (706)
Q Consensus 298 ~v~~~~~----~~g~~i~~D~vI~a~G~~~~~---~~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~ 369 (706)
.+.+... ++++++++|.||+|+|.+|+. ++.+.++ .+++|+|.||+ ++| |+.|+|||+|||+.. ++++
T Consensus 258 ~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~-~~~-t~~~~IyA~GD~~~~--~~~~ 333 (478)
T 1v59_A 258 VVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDD-QFN-SKFPHIKVVGDVTFG--PMLA 333 (478)
T ss_dssp EEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCCT-TSB-CSSTTEEECGGGSSS--CCCH
T ss_pred eEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeECc-CCc-cCCCCEEEeeccCCC--cccH
Confidence 3333221 246789999999999999995 5677788 67789999999 688 899999999999986 4578
Q ss_pred HHHHHhHHHHHHHHHH
Q psy8791 370 AAVAGQCKVVYDNLSA 385 (706)
Q Consensus 370 ~~a~~qg~~~a~ni~~ 385 (706)
..|..||+.+|+||..
T Consensus 334 ~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 334 HKAEEEGIAAVEMLKT 349 (478)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC
Confidence 8999999999999974
No 69
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.94 E-value=1.7e-26 Score=253.76 Aligned_cols=280 Identities=18% Similarity=0.214 Sum_probs=193.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-------ccccc---------c---cCcc------ccCcc
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-------PMFTL---------I---GGGM------KKLSD 85 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~~~~---------~---~~~~------~~~~~ 85 (706)
+||+|||||+||++||.+|++. +.+|+|||+++..... |.... . ..+. .+...
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 79 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQL--GMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPA 79 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHH
T ss_pred CCEEEECCChhHHHHHHHHHHC--CCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHH
Confidence 6899999999999999999998 8999999999753211 11000 0 0000 00000
Q ss_pred ccc-----------cccccc-CCCcEEEEceeEEEEcCCCEEEeC-CCeEEEecEEEEccccccccCCCCCCcccccccc
Q psy8791 86 SRR-----------PMKSVL-PSGATWVKDKIVSFDPENNRVRTQ-AGSEISYEYMIVASGIQMYYDRVKGPSALINALG 152 (706)
Q Consensus 86 ~~~-----------~~~~~~-~~~v~~i~~~v~~id~~~~~v~~~-~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~ 152 (706)
+.. .+...+ ..+++++.+++..+++ +.+.+. +|.++.||+||+|||+.+..|+++|.+ +
T Consensus 80 ~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~--~~~~v~~~g~~~~~d~lviAtG~~p~~~~~~g~~--~---- 151 (455)
T 2yqu_A 80 LMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSE--RKVLVEETGEELEARYILIATGSAPLIPPWAQVD--Y---- 151 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSS--SEEEETTTCCEEEEEEEEECCCEEECCCTTBCCC--S----
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecC--CeEEEeeCCEEEEecEEEECCCCCCCCCCCCCCC--c----
Confidence 000 011222 2579999888776654 444443 567899999999999998888777721 0
Q ss_pred cccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhcc-CCCEEEecCCCCeeeCChh
Q psy8791 153 HCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQ-SGPVLYTFPATPIKCGGAP 231 (706)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~-~g~~vv~~~~~~v~~~g~~ 231 (706)
. .+ ++.+.+ .... .++.+ +.++|++
T Consensus 152 -----------------~--------------------~v---~~~~~~-------~~~~~~~~~v-------vIiGgG~ 177 (455)
T 2yqu_A 152 -----------------E--------------------RV---VTSTEA-------LSFPEVPKRL-------IVVGGGV 177 (455)
T ss_dssp -----------------S--------------------SE---ECHHHH-------TCCSSCCSEE-------EEECCSH
T ss_pred -----------------C--------------------cE---echHHh-------hccccCCCeE-------EEECCCH
Confidence 0 00 011110 0010 11111 2234443
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceE
Q psy8791 232 MKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTER 309 (706)
Q Consensus 232 ~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~ 309 (706)
. +......+++.|. +|+++++.+.+++ ++.+.+.+.+.+++.||+++++++|++++.+++.+.+. +++|++
T Consensus 178 ~--g~e~A~~l~~~g~----~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~-~~~g~~ 250 (455)
T 2yqu_A 178 I--GLELGVVWHRLGA----EVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVE-LEGGEV 250 (455)
T ss_dssp H--HHHHHHHHHHTTC----EEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEE-ETTSCE
T ss_pred H--HHHHHHHHHHcCC----EEEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEE-ECCCeE
Confidence 2 2223345666664 5999999988876 68889999999999999999999999998765555543 346789
Q ss_pred EeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHH
Q psy8791 310 LPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSA 385 (706)
Q Consensus 310 i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~ 385 (706)
+++|.||+|+|.+|+.. +...++ .+++|++.||+ +++ |+.|+|||+|||+.. ++++..|..||+.+|+||..
T Consensus 251 i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~-~~~-t~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 251 LEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDE-HLR-TRVPHIYAIGDVVRG--PMLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp EEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCT-TSB-CSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred EEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECC-Ccc-cCCCCEEEEecCCCC--ccCHHHHHHhHHHHHHHHcC
Confidence 99999999999999953 455677 56789999999 688 899999999999986 45788999999999999974
No 70
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.94 E-value=9.1e-26 Score=247.92 Aligned_cols=274 Identities=19% Similarity=0.213 Sum_probs=188.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-------ccc---------cc---cc----CccccCcc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-------PMF---------TL---IG----GGMKKLSD 85 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~~---------~~---~~----~~~~~~~~ 85 (706)
.++||+|||||+||++||.+|++. +++|+|||++.. ... |.. .. .. .+.. ...
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~-GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~-~~~ 79 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQL--GIPTVLVEGQAL-GGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGIS-VAS 79 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHH--TCCEEEECSSCT-THHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCC-CCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC--CCEEEEEccCCC-CCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcc-cCC
Confidence 357999999999999999999999 899999999542 111 110 00 00 0110 000
Q ss_pred cccc------------------ccccc-CCCcEEEEceeEEEEcCCCEEEeCCCeEEEecEEEEccccccccCC-CCCCc
Q psy8791 86 SRRP------------------MKSVL-PSGATWVKDKIVSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDR-VKGPS 145 (706)
Q Consensus 86 ~~~~------------------~~~~~-~~~v~~i~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~-~~g~~ 145 (706)
...+ +..++ ..+++++.+++..++ .++|.+++ .++.||+||+|||+.+..|+ +|. +
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~--~~~v~v~~-~~~~~d~lviATGs~p~~~~~~~~-~ 155 (458)
T 1lvl_A 80 PRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLD--GKQVEVDG-QRIQCEHLLLATGSSSVELPMLPL-G 155 (458)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEE--TTEEEETT-EEEECSEEEECCCEEECCBTTBCC-B
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEcc--CCEEEEee-EEEEeCEEEEeCCCCCCCCCCCCc-c
Confidence 0011 11222 368999998887776 46788876 78999999999999886554 332 0
Q ss_pred ccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCe
Q psy8791 146 ALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPI 225 (706)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v 225 (706)
. ..++ ..+.+.. .. ...++ +
T Consensus 156 --~---------------------~v~~-------~~~~~~~---------------------~~-~~~~v--------v 175 (458)
T 1lvl_A 156 --G---------------------PVIS-------STEALAP---------------------KA-LPQHL--------V 175 (458)
T ss_dssp --T---------------------TEEC-------HHHHTCC---------------------SS-CCSEE--------E
T ss_pred --C---------------------cEec-------HHHHhhh---------------------hc-cCCeE--------E
Confidence 0 0000 1111110 00 11111 2
Q ss_pred eeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEe
Q psy8791 226 KCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKS 303 (706)
Q Consensus 226 ~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~ 303 (706)
.++|++. +......+++.|. +|+++++.+.+++ ++.+.+.+.+.+++.||+++++++|.+++. ++ +.+.
T Consensus 176 ViGgG~~--g~e~A~~l~~~g~----~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~~-v~v~- 246 (458)
T 1lvl_A 176 VVGGGYI--GLELGIAYRKLGA----QVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYEN-GC-LLAN- 246 (458)
T ss_dssp EECCSHH--HHHHHHHHHHHTC----EEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEEEEET-TE-EEEE-
T ss_pred EECcCHH--HHHHHHHHHHCCC----eEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEe-CC-EEEE-
Confidence 2344432 2233345666664 5999999998886 688899999999999999999999999987 43 5554
Q ss_pred CCCc--eEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHH
Q psy8791 304 EDKT--ERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCK 377 (706)
Q Consensus 304 ~~~g--~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~ 377 (706)
.++| +++++|.||+|+|.+|+.. +...++ .+++ +|.||+ +++ |+.|+|||+|||+.. ++++..|..||+
T Consensus 247 ~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd~-~~~-t~~~~Iya~GD~~~~--~~~~~~A~~~g~ 321 (458)
T 1lvl_A 247 DGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAIDE-RCQ-TSMHNVWAIGDVAGE--PMLAHRAMAQGE 321 (458)
T ss_dssp CSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCCT-TCB-CSSTTEEECGGGGCS--SCCHHHHHHHHH
T ss_pred ECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeECC-CCc-CCCCCEEEeeccCCC--cccHHHHHHHHH
Confidence 3345 6899999999999999953 466777 4556 899999 688 899999999999986 458889999999
Q ss_pred HHHHHHH
Q psy8791 378 VVYDNLS 384 (706)
Q Consensus 378 ~~a~ni~ 384 (706)
.+|+||.
T Consensus 322 ~aa~~i~ 328 (458)
T 1lvl_A 322 MVAEIIA 328 (458)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 9999995
No 71
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=5.8e-26 Score=241.35 Aligned_cols=287 Identities=17% Similarity=0.162 Sum_probs=179.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCccc------------Ccccc-cccCccccC--------ccccc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYY------------QPMFT-LIGGGMKKL--------SDSRR 88 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~------------~p~~~-~~~~~~~~~--------~~~~~ 88 (706)
+++|+|||||++|+++|..|+++ +++|+|||+++.... .|... ......... ..+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~--g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRS--GLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLA 80 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHS--SCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHH
Confidence 46899999999999999999998 899999999875311 11100 000000000 11111
Q ss_pred ccccccC-CCcEEEE-ceeEEEEcCCCE---EEeCCCeEEEecEEEEcccc--ccccCCCCCCccccccccccccccccc
Q psy8791 89 PMKSVLP-SGATWVK-DKIVSFDPENNR---VRTQAGSEISYEYMIVASGI--QMYYDRVKGPSALINALGHCDLVRSFV 161 (706)
Q Consensus 89 ~~~~~~~-~~v~~i~-~~v~~id~~~~~---v~~~~g~~~~yd~lviAtG~--~~~~~~~~g~~~~~~~~~~~~~~~~~~ 161 (706)
.+.++.. .++++.. .+|++++.+.+. |.++++ ++.||+||+|||. .+..|.+||.+
T Consensus 81 ~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~~g~~---------------- 143 (357)
T 4a9w_A 81 YLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGEAYTPEYQGLE---------------- 143 (357)
T ss_dssp HHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGGBCCCCCTTGG----------------
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCCCCCCCCCCcc----------------
Confidence 1222222 5777766 689999988776 667777 8999999999995 56668888832
Q ss_pred ccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHH
Q psy8791 162 TFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEY 241 (706)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~ 241 (706)
.+..+.++... + .+. ..+.+.+++ .++|+.. ...++ ..
T Consensus 144 ----~~~~~~~~~~~----~--------------~~~----------~~~~~~~v~--------VvG~G~~-g~e~a-~~ 181 (357)
T 4a9w_A 144 ----SFAGIQLHSAH----Y--------------STP----------APFAGMRVA--------IIGGGNS-GAQIL-AE 181 (357)
T ss_dssp ----GCCSEEEEGGG----C--------------CCS----------GGGTTSEEE--------EECCSHH-HHHHH-HH
T ss_pred ----ccCCcEEEecc----C--------------CCh----------hhcCCCEEE--------EECCCcC-HHHHH-HH
Confidence 01111111100 0 000 011222222 2333322 12222 22
Q ss_pred HHHcCCCCCcEEEEEeCC-CcCCC----chhHHHHHHHHHH----------------------------hCCceEEcCCc
Q psy8791 242 LRKHKKRDAAKLTYCTGM-GVLFP----SPFYAEKIHDILI----------------------------GRGVDVHKGKA 288 (706)
Q Consensus 242 l~~~g~~~~~~v~l~~~~-~~~~~----~~~~~~~~~~~l~----------------------------~~gV~v~~~~~ 288 (706)
+.+.+ +++++++. +.+++ .+.+.+.+.+.+. +.|+ +..+..
T Consensus 182 l~~~~-----~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-i~~~~~ 255 (357)
T 4a9w_A 182 VSTVA-----ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDLPPGGFGDIVMVPPVLDARARGV-LAAVPP 255 (357)
T ss_dssp HTTTS-----EEEEECSSCCCBCCTTCCTHHHHTC----------------------CBCCCHHHHHHHHTTC-CCEECC
T ss_pred HHhhC-----CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCcccccccCcccChhHHHHHhcCc-eEEecC
Confidence 33333 48888876 44444 1233333333322 3454 555667
Q ss_pred eEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch-hhhhcCCCCCCCCceeeCccccccCCCCCEEEcc--ccCCCCC
Q psy8791 289 LVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV-PELATSRLVDQSGYVNVDKATLQHVKYSNVFAIG--DCSNLPT 365 (706)
Q Consensus 289 v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~-~~~~~~~l~~~~G~i~vd~~~l~~~~~~~Ifa~G--D~~~~~~ 365 (706)
+.+++.++ +. +++|+++++|+||+|+|++|+ +++.+.++.+++|++.||+++++.++.|||||+| ||+. +.
T Consensus 256 v~~~~~~~--v~---~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~G~i~vd~~~l~~t~~~~vya~Gd~d~~~-~~ 329 (357)
T 4a9w_A 256 PARFSPTG--MQ---WADGTERAFDAVIWCTGFRPALSHLKGLDLVTPQGQVEVDGSGLRALAVPSVWLLGYGDWNG-MA 329 (357)
T ss_dssp CSEEETTE--EE---CTTSCEEECSEEEECCCBCCCCGGGTTTTCBCTTSCBCBCTTSCBBSSCTTEEECSSCGGGS-TT
T ss_pred cceEeCCe--eE---ECCCCEecCCEEEECCCcCCCCcccCcccccCCCCCccccCCcccCCCCCCeEEeccccccc-cc
Confidence 77777643 43 348899999999999999999 7787788888899999999335669999999999 5555 34
Q ss_pred CchHHHHHHhHHHHHHHHHHHHcC
Q psy8791 366 SKTAAAVAGQCKVVYDNLSAVMKN 389 (706)
Q Consensus 366 ~~~~~~a~~qg~~~a~ni~~~l~g 389 (706)
+++...|..||+.+|+||.+.++|
T Consensus 330 ~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 330 SATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp CSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHh
Confidence 567778999999999999999988
No 72
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.93 E-value=2.7e-25 Score=246.12 Aligned_cols=281 Identities=12% Similarity=0.088 Sum_probs=190.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcc----------------------cccc--cCc--cccC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPM----------------------FTLI--GGG--MKKL 83 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~----------------------~~~~--~~~--~~~~ 83 (706)
++||+|||||+||++||.+|++. |.+|+|||+++. ...+. ++.+ ..+ ..+.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~--G~~V~liE~~~~-GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 84 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKH--TDKVVLIEGGAY-GTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVNG 84 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT--CSCEEEEESSCS-SCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--CCcEEEEeCCCC-CCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccCH
Confidence 47999999999999999999998 899999999762 11110 0000 000 0000
Q ss_pred cccccccc------------cccC-CCcEEEEceeEEEEcCCCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccc
Q psy8791 84 SDSRRPMK------------SVLP-SGATWVKDKIVSFDPENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINA 150 (706)
Q Consensus 84 ~~~~~~~~------------~~~~-~~v~~i~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~ 150 (706)
..+...+. .+.. .+++++.++..-.+ .++|.++++.++.||+||+|||+.+..|++++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~--~~~v~~~~~~~~~~d~lViATGs~p~~p~~~~~~----- 157 (492)
T 3ic9_A 85 KAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLD--EHTLQVDDHSQVIAKRIVIATGSRPNYPEFLAAA----- 157 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEE--TTEEEETTTEEEEEEEEEECCCEECCCCHHHHTT-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEec--CCEEEEcCCcEEEeCEEEEccCCCCcCCCCCCcc-----
Confidence 00000000 0111 24456666665554 4678888888999999999999998876655410
Q ss_pred cccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCCh
Q psy8791 151 LGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGA 230 (706)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~ 230 (706)
.. .+ ++.+.+.. +... ++. .+.++|+
T Consensus 158 -------------------------------~~-------~v---~t~~~~~~----~~~~--~k~-------vvViGgG 183 (492)
T 3ic9_A 158 -------------------------------GS-------RL---LTNDNLFE----LNDL--PKS-------VAVFGPG 183 (492)
T ss_dssp -------------------------------GG-------GE---ECHHHHTT----CSSC--CSE-------EEEESSC
T ss_pred -------------------------------CC-------cE---EcHHHHhh----hhhc--CCe-------EEEECCC
Confidence 00 00 01111000 0011 111 1223444
Q ss_pred hHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeC-CCc
Q psy8791 231 PMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSE-DKT 307 (706)
Q Consensus 231 ~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~-~~g 307 (706)
.. +......+.+.|. +|+++++.+.+++ ++++.+.+++.|++. |++++++.|++++.+++.+.+... .+|
T Consensus 184 ~i--g~E~A~~l~~~g~----~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G 256 (492)
T 3ic9_A 184 VI--GLELGQALSRLGV----IVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSG 256 (492)
T ss_dssp HH--HHHHHHHHHHTTC----EEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTC
T ss_pred HH--HHHHHHHHHHcCC----eEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCC
Confidence 22 2333345666664 4999999998876 688999999999998 999999999999876554544332 256
Q ss_pred --eEEeecEEEECCCCCchhh---hhcCCC-CCCCCceeeC-ccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHH
Q psy8791 308 --ERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGYVNVD-KATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVY 380 (706)
Q Consensus 308 --~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~i~vd-~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a 380 (706)
+++++|.||+|+|.+|+.. +...++ .+++|++.|| + +++ |+.|+|||+|||+.. ++++..|..||+++|
T Consensus 257 ~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~-~~~-t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa 332 (492)
T 3ic9_A 257 QKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDEL-TLQ-TSVDHIFVAGDANNT--LTLLHEAADDGKVAG 332 (492)
T ss_dssp CEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTT-TCB-CSSTTEEECGGGGTS--SCSHHHHHHHHHHHH
T ss_pred ceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcc-ccc-CCCCCEEEEEecCCC--CccHHHHHHHHHHHH
Confidence 7899999999999999954 566788 7889999999 6 687 899999999999986 458889999999999
Q ss_pred HHHHH
Q psy8791 381 DNLSA 385 (706)
Q Consensus 381 ~ni~~ 385 (706)
.||..
T Consensus 333 ~~i~~ 337 (492)
T 3ic9_A 333 TNAGA 337 (492)
T ss_dssp HHHHH
T ss_pred HHHcC
Confidence 99975
No 73
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.93 E-value=9e-25 Score=243.38 Aligned_cols=291 Identities=15% Similarity=0.151 Sum_probs=193.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCccc--CcccccccCc-cccCcccccccccc-cCCCcEEEEc
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYY--QPMFTLIGGG-MKKLSDSRRPMKSV-LPSGATWVKD 103 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~--~p~~~~~~~~-~~~~~~~~~~~~~~-~~~~v~~i~~ 103 (706)
...++|+|||||+||++||.+|++. |++|+|||+.....+ .+........ ......+...+.+. ...+++++.+
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~--G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~ 287 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARK--GIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDS 287 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECS
T ss_pred cCcccEEEECCcHHHHHHHHHHHhC--CCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcC
Confidence 3467999999999999999999998 899999997421111 0111111100 00111122222222 2468998886
Q ss_pred -eeEEEEcC-----CCEEEeCCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccC
Q psy8791 104 -KIVSFDPE-----NNRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRR 177 (706)
Q Consensus 104 -~v~~id~~-----~~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (706)
+|+.++++ ...|.+++|.++.||+||+|||+.+..+.+||.+ + |..+.
T Consensus 288 ~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~~~ipG~~--~------------------~~~~~------ 341 (521)
T 1hyu_A 288 QSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRNMNVPGED--Q------------------YRTKG------ 341 (521)
T ss_dssp CCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTT--T------------------TTTTT------
T ss_pred CEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCCCCCCChh--h------------------hcCce------
Confidence 99999864 3467888888999999999999998888889831 0 00000
Q ss_pred ccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEe
Q psy8791 178 PSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCT 257 (706)
Q Consensus 178 ~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~ 257 (706)
+......+. ..+.+.+++ .++|+.. ... ....+.+.+. +|++++
T Consensus 342 --------------v~~~~~~~~--------~~~~~k~V~--------ViGgG~~-g~E-~A~~L~~~g~----~Vtlv~ 385 (521)
T 1hyu_A 342 --------------VTYCPHCDG--------PLFKGKRVA--------VIGGGNS-GVE-AAIDLAGIVE----HVTLLE 385 (521)
T ss_dssp --------------EECCTTCCG--------GGGBTSEEE--------EECCSHH-HHH-HHHHHHHHBS----EEEEEC
T ss_pred --------------EEEeecCch--------hhcCCCeEE--------EECCCHH-HHH-HHHHHHhhCC----EEEEEE
Confidence 000000000 011222222 2333322 122 2234555553 599999
Q ss_pred CCCcCCCchhHHHHHHHHHHh-CCceEEcCCceEEEeCCCCE---EEEEeCCCc--eEEeecEEEECCCCCchh-hhhcC
Q psy8791 258 GMGVLFPSPFYAEKIHDILIG-RGVDVHKGKALVEIDLANKE---AVFKSEDKT--ERLPYAIMHVTPPMGPVP-ELATS 330 (706)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~~---v~~~~~~~g--~~i~~D~vI~a~G~~~~~-~~~~~ 330 (706)
+.+.+..+ ..+.+.|++ .||++++++.++++..+++. +.+....+| .++++|.||+++|.+|+. ++..
T Consensus 386 ~~~~l~~~----~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~- 460 (521)
T 1hyu_A 386 FAPEMKAD----QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEG- 460 (521)
T ss_dssp SSSSCCSC----HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGGTT-
T ss_pred eCcccCcC----HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHHhh-
Confidence 98887653 345667777 69999999999999875443 444432234 478999999999999995 5554
Q ss_pred CC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCC
Q psy8791 331 RL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNR 390 (706)
Q Consensus 331 ~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~ 390 (706)
.+ ++++|+|.||+ +++ |+.|||||+|||+..+ .+.+..|..||+.+|.||.+.+.++
T Consensus 461 ~l~~~~~G~I~Vd~-~~~-ts~p~VfA~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~L~~~ 518 (521)
T 1hyu_A 461 ALERNRMGEIIIDA-KCE-TSVKGVFAAGDCTTVP-YKQIIIATGEGAKASLSAFDYLIRT 518 (521)
T ss_dssp TSCBCTTSCBCCCT-TCB-CSSTTEEECSTTBCCS-SCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCCCCcEEeCC-CCC-CCCCCEEEeecccCCC-cceeeehHHhHHHHHHHHHHHHHhh
Confidence 45 67889999999 688 8999999999999875 3678899999999999999988654
No 74
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.93 E-value=5.1e-24 Score=242.08 Aligned_cols=286 Identities=18% Similarity=0.218 Sum_probs=188.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCC-CCc---cc--C---------cccccc-------------cCc
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPT-DDH---YY--Q---------PMFTLI-------------GGG 79 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~-~~~---~~--~---------p~~~~~-------------~~~ 79 (706)
...+||+|||||+||++||.+|++. +++|+|||+. +.. .+ . |..... ..+
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~--g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g 182 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKY--GAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFG 182 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHT--TCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccEEEECCCccHHHHHHHHHhC--CCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCC
Confidence 3467999999999999999999998 8999999973 210 00 0 100000 000
Q ss_pred cccCcc-ccccc------------------c-cccCCCcEEEEceeEEEEcCCCEEEeCCC--eEEEecEEEEccccccc
Q psy8791 80 MKKLSD-SRRPM------------------K-SVLPSGATWVKDKIVSFDPENNRVRTQAG--SEISYEYMIVASGIQMY 137 (706)
Q Consensus 80 ~~~~~~-~~~~~------------------~-~~~~~~v~~i~~~v~~id~~~~~v~~~~g--~~~~yd~lviAtG~~~~ 137 (706)
...... ...++ . .+...+++++.+.+..+++....+...+| .++.||+||+|||+.+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~p~ 262 (598)
T 2x8g_A 183 WSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPK 262 (598)
T ss_dssp CCCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEEECCCEEEC
T ss_pred ccccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCCCC
Confidence 000000 00000 0 11235899998888888876545555566 46899999999999999
Q ss_pred cCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEE
Q psy8791 138 YDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVL 217 (706)
Q Consensus 138 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~v 217 (706)
.|++||.+ ++.. . ..+.+. + ....+++
T Consensus 263 ~p~i~G~~--~~~~---------------------~-------~~~~~~---------------------~-~~~~~~v- 289 (598)
T 2x8g_A 263 YPEIPGAV--EYGI---------------------T-------SDDLFS---------------------L-PYFPGKT- 289 (598)
T ss_dssp CCSSTTHH--HHCE---------------------E-------HHHHTT---------------------C-SSCCCSE-
T ss_pred CCCCCCcc--cceE---------------------c-------HHHHhh---------------------C-ccCCCEE-
Confidence 88899821 0000 0 000000 0 0111222
Q ss_pred EecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeC-
Q psy8791 218 YTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDL- 294 (706)
Q Consensus 218 v~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~- 294 (706)
+.++|+.. +......+.+.|.. |+++++. .+++ ++.+.+.+.+.|++.||++++++.+.++..
T Consensus 290 -------vViGgG~~--g~E~A~~l~~~g~~----Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~ 355 (598)
T 2x8g_A 290 -------LVIGASYV--ALECAGFLASLGGD----VTVMVRS-ILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQL 355 (598)
T ss_dssp -------EEECCSHH--HHHHHHHHHHTTCC----EEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEEE
T ss_pred -------EEECCCHH--HHHHHHHHHHcCCE----EEEEECC-cCcCcCCHHHHHHHHHHHHhCCCEEEECCeEEEEEec
Confidence 22344422 22333456667643 9999887 5554 678889999999999999999988777742
Q ss_pred ------C--CCEEEEE-eCCCceEEe--ecEEEECCCCCchh-h--hhcCCC-CCCCCceeeCccccccCCCCCEEEccc
Q psy8791 295 ------A--NKEAVFK-SEDKTERLP--YAIMHVTPPMGPVP-E--LATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGD 359 (706)
Q Consensus 295 ------~--~~~v~~~-~~~~g~~i~--~D~vI~a~G~~~~~-~--~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD 359 (706)
+ .+.+.+. ...+|++++ +|.||+|+|++|+. + +...++ .+++|+|.||+ +++ |+.|+|||+||
T Consensus 356 ~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~-~~~-ts~~~VyA~GD 433 (598)
T 2x8g_A 356 KVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTD-DEQ-TTVSNVYAIGD 433 (598)
T ss_dssp ECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCCT-TSB-CSSTTEEECGG
T ss_pred cccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeCC-CCc-CCCCCEEEEee
Confidence 1 1333322 123566554 99999999999995 4 345677 67889999999 687 89999999999
Q ss_pred cCCCCCCchHHHHHHhHHHHHHHHHH
Q psy8791 360 CSNLPTSKTAAAVAGQCKVVYDNLSA 385 (706)
Q Consensus 360 ~~~~~~~~~~~~a~~qg~~~a~ni~~ 385 (706)
|+... ++++..|..||+.+|+||..
T Consensus 434 ~~~~~-~~~~~~A~~~g~~aa~~i~~ 458 (598)
T 2x8g_A 434 INAGK-PQLTPVAIQAGRYLARRLFA 458 (598)
T ss_dssp GBTTS-CCCHHHHHHHHHHHHHHHHH
T ss_pred ecCCC-CccHHHHHHhHHHHHHHHhc
Confidence 97542 56888999999999999964
No 75
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.93 E-value=2.3e-24 Score=230.38 Aligned_cols=288 Identities=16% Similarity=0.204 Sum_probs=182.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCC-eEEEEcCCCC-----------cccCcccccccCcc-----------------
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKG-QVSIVEPTDD-----------HYYQPMFTLIGGGM----------------- 80 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~-~Vtlie~~~~-----------~~~~p~~~~~~~~~----------------- 80 (706)
+++|+|||||+||+++|.+|++. ++ +|+|||+++. +.+.|.+.....+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~--g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDF--GITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFN 81 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHC
T ss_pred cCcEEEECcCHHHHHHHHHHHHc--CCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhcccccccccccc
Confidence 46899999999999999999998 78 9999999860 00111111000000
Q ss_pred ---ccCccccccccccc-CCCcEEEE-ceeEEEEcCC--CEEEeCCCeEEEecEEEEccccccccCCCCCCccccccccc
Q psy8791 81 ---KKLSDSRRPMKSVL-PSGATWVK-DKIVSFDPEN--NRVRTQAGSEISYEYMIVASGIQMYYDRVKGPSALINALGH 153 (706)
Q Consensus 81 ---~~~~~~~~~~~~~~-~~~v~~i~-~~v~~id~~~--~~v~~~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~ 153 (706)
.....+...+..+. ..+++++. .+|++++++. ..|.+.++ ++.||+||+|||+.+. |.+|+ + +.
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~-p~ip~-~---~~--- 152 (369)
T 3d1c_A 82 EEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF-PKKPF-K---YG--- 152 (369)
T ss_dssp CSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS-BCCCS-S---SC---
T ss_pred ccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc-cCCCC-C---ce---
Confidence 00000111122222 25788876 4789998764 35666666 6999999999998764 45554 1 00
Q ss_pred ccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHH
Q psy8791 154 CDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMK 233 (706)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~ 233 (706)
++. ... .+. ..+.+.++++ ++|+..
T Consensus 153 ------------------~~~-------~~~-----------~~~----------~~~~~~~vvV--------vG~G~~- 177 (369)
T 3d1c_A 153 ------------------IHY-------SEI-----------EDF----------DNFNKGQYVV--------IGGNES- 177 (369)
T ss_dssp ------------------EEG-------GGC-----------SCG----------GGSCSSEEEE--------ECCSHH-
T ss_pred ------------------ech-------hhc-----------CCh----------hhcCCCEEEE--------ECCCcC-
Confidence 000 000 000 0122222222 333322
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC---------chhHHHHHHHHHHhCC-ceEEcCCceEEEeCCCCEEEEEe
Q psy8791 234 AVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP---------SPFYAEKIHDILIGRG-VDVHKGKALVEIDLANKEAVFKS 303 (706)
Q Consensus 234 ~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~---------~~~~~~~~~~~l~~~g-V~v~~~~~v~~i~~~~~~v~~~~ 303 (706)
+......+.+.+. +|+++++.+.+++ ++.+.+.+++.|++.| |++++++.|.+++.+++.+.+.
T Consensus 178 -g~e~a~~l~~~g~----~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~- 251 (369)
T 3d1c_A 178 -GFDAAYQLAKNGS----DIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHIS- 251 (369)
T ss_dssp -HHHHHHHHHHTTC----EEEEECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEE-
T ss_pred -HHHHHHHHHhcCC----eEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEE-
Confidence 2222334555553 5999998877652 3566788889999997 9999999999996433433332
Q ss_pred CCCceEEe-ecEEEECCCCCchh-hhhcCCCCCCCCceeeCccccccCCCCCEEEccccCCCCCCc--hHHHHHHhHHHH
Q psy8791 304 EDKTERLP-YAIMHVTPPMGPVP-ELATSRLVDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSK--TAAAVAGQCKVV 379 (706)
Q Consensus 304 ~~~g~~i~-~D~vI~a~G~~~~~-~~~~~~l~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~--~~~~a~~qg~~~ 379 (706)
+.+|++++ +|.+|+|+|++|+. ++.+.++.+++|++.||+ .++.|++|||||+|||+..+... ....+.+||+++
T Consensus 252 ~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~~~~~~g~i~v~~-~~~~t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~ 330 (369)
T 3d1c_A 252 FDSGQSVHTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTT-HDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVL 330 (369)
T ss_dssp ESSSCCEEESSCCEECCCBCGGGSHHHHHHSCCTTSCCCBCT-TSBBSSSTTEEECSTTCCCSSCCCCSHHHHGGGHHHH
T ss_pred ecCCeEeccCCceEEeeccCCccchhhhhhccCCCCCEEech-hhcccCCCCeEEeccccccCCeeEEEEehhhHHHHHH
Confidence 24677665 59999999999996 666544557789999998 55669999999999999875543 345678899999
Q ss_pred HHHHHHHHcCC
Q psy8791 380 YDNLSAVMKNR 390 (706)
Q Consensus 380 a~ni~~~l~g~ 390 (706)
|+||...+...
T Consensus 331 a~~l~~~~~~p 341 (369)
T 3d1c_A 331 AHLLTQREGLP 341 (369)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHhcccCCC
Confidence 99998877544
No 76
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.92 E-value=2.2e-25 Score=243.12 Aligned_cols=290 Identities=16% Similarity=0.090 Sum_probs=182.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCccccc-ccCccccCcccccc-cccccCCCcEEEEcee
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTL-IGGGMKKLSDSRRP-MKSVLPSGATWVKDKI 105 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~-~~~~~~~~~~~~~~-~~~~~~~~v~~i~~~v 105 (706)
...++|+|||||+|||+||.+|++. |++|+|||+++..... +.+ ++. ...+..+... ...+...+++++.++.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~--G~~V~v~e~~~~~GG~--l~~gip~-~~~~~~~~~~~~~~l~~~gv~~~~~~~ 194 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAK--GYEVHVYDRYDRMGGL--LVYGIPG-FKLEKSVVERRVKLLADAGVIYHPNFE 194 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHH--TCCEEEECSSSSCSTH--HHHTSCT-TTSCHHHHHHHHHHHHHTTCEEETTCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeccCCCCCe--eeecCCC-ccCCHHHHHHHHHHHHHCCcEEEeCCE
Confidence 3567999999999999999999999 8999999999864211 111 111 1111122211 2223346888877654
Q ss_pred EEEEcCCCEEEeCCCeEEEecEEEEccccc-cccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhh
Q psy8791 106 VSFDPENNRVRTQAGSEISYEYMIVASGIQ-MYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEA 184 (706)
Q Consensus 106 ~~id~~~~~v~~~~g~~~~yd~lviAtG~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 184 (706)
+. +.++++++ .+.||+||+|||+. +..+.+||.+ ..|
T Consensus 195 v~-----~~v~~~~~-~~~~d~vvlAtG~~~~~~~~ipG~~----~~g-------------------------------- 232 (456)
T 2vdc_G 195 VG-----RDASLPEL-RRKHVAVLVATGVYKARDIKAPGSG----LGN-------------------------------- 232 (456)
T ss_dssp BT-----TTBCHHHH-HSSCSEEEECCCCCEECCTTCSCCT----TTT--------------------------------
T ss_pred ec-----cEEEhhHh-HhhCCEEEEecCCCCCCCCCCCCCc----CCC--------------------------------
Confidence 32 22334333 35799999999986 6677888821 000
Q ss_pred hcCCCCCcccCCChhHHHHHHH-H-HHh----------ccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcE
Q psy8791 185 LDQPDSGVSTNYSPQYVEKTLR-N-LQH----------FQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAK 252 (706)
Q Consensus 185 ~~~~~~~v~~~~~~~~~~~~~~-~-l~~----------~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~ 252 (706)
+.. ......... . +.. ...++.| ++++|+.. ....+ ..+.+.|.. +
T Consensus 233 -------v~~---a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~V-------vVIGgG~~-a~d~A-~~~~r~Ga~---~ 290 (456)
T 2vdc_G 233 -------IVA---ALDYLTTSNKVSLGDTVEAYENGSLNAAGKHV-------VVLGGGDT-AMDCV-RTAIRQGAT---S 290 (456)
T ss_dssp -------EEE---HHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEE-------EEECSSHH-HHHHH-HHHHHTTCS---E
T ss_pred -------cEE---HHHHHHHhhhhhcccccccccccccccCCCEE-------EEECCChh-HHHHH-HHHHHcCCC---E
Confidence 000 000000000 0 000 0112222 22344422 22222 334455532 4
Q ss_pred EEEEeCCCcC-CCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCE--EEEEe-----------------CCCceEEee
Q psy8791 253 LTYCTGMGVL-FPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKE--AVFKS-----------------EDKTERLPY 312 (706)
Q Consensus 253 v~l~~~~~~~-~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~--v~~~~-----------------~~~g~~i~~ 312 (706)
|+++++.+.. ++. .... .+.+++.||++++++.+.+|..+++. +.+.. .+++.++++
T Consensus 291 Vtiv~r~~~~~~p~--~~~e-~~~~~~~Gv~~~~~~~~~~i~~~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~a 367 (456)
T 2vdc_G 291 VKCLYRRDRKNMPG--SQRE-VAHAEEEGVEFIWQAAPEGFTGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQA 367 (456)
T ss_dssp EEEECSSCSTTCSS--CHHH-HHHHHHTTCEEECCSSSCCEEEEEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEEC
T ss_pred EEEEEeCCccCCCC--CHHH-HHHHHHCCCEEEeCCCceEEeCCCcEEEEEEEEEEecccCCcCCccccccCCcEEEEEC
Confidence 9999988765 441 1112 35677889999999998888753211 12210 112257999
Q ss_pred cEEEECCCCCchh---hhhcCCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHc
Q psy8791 313 AIMHVTPPMGPVP---ELATSRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMK 388 (706)
Q Consensus 313 D~vI~a~G~~~~~---~~~~~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~ 388 (706)
|+||+|+|+.|++ ++...++ ++++|+|.||+++++ |+.|+|||+|||+..+ +++..|+.||+.+|.+|...+.
T Consensus 368 D~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~-Ts~~~VfA~GD~~~g~--~~v~~A~~~G~~aA~~i~~~L~ 444 (456)
T 2vdc_G 368 DLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKM-TNMDGVFAAGDIVRGA--SLVVWAIRDGRDAAEGIHAYAK 444 (456)
T ss_dssp SEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCB-CSSTTEEECGGGGSSC--CSHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCCc-CCCCCEEEeccccCCc--hHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999984 5677788 788999999994477 8999999999999864 5889999999999999999998
Q ss_pred CCCC
Q psy8791 389 NRAL 392 (706)
Q Consensus 389 g~~~ 392 (706)
|++.
T Consensus 445 ~~~~ 448 (456)
T 2vdc_G 445 AKAE 448 (456)
T ss_dssp HHHT
T ss_pred cCCC
Confidence 7543
No 77
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.92 E-value=2.3e-23 Score=230.70 Aligned_cols=299 Identities=13% Similarity=0.159 Sum_probs=195.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc--------ccC-------cc--cc-------cc--cCccc--
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH--------YYQ-------PM--FT-------LI--GGGMK-- 81 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~--------~~~-------p~--~~-------~~--~~~~~-- 81 (706)
++|+||||||+||++||.++++. |.+|+|||+.+.. ... |. +. .. ....+
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~--G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi 119 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAH--GARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGW 119 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT--TCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTE
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCc
Confidence 57999999999999999999999 8999999976521 111 10 00 00 00000
Q ss_pred cCccccccc------------------cc-ccCCCcEEEEceeEEEEcCCCEEEeC----CCeEEEecEEEEcccccccc
Q psy8791 82 KLSDSRRPM------------------KS-VLPSGATWVKDKIVSFDPENNRVRTQ----AGSEISYEYMIVASGIQMYY 138 (706)
Q Consensus 82 ~~~~~~~~~------------------~~-~~~~~v~~i~~~v~~id~~~~~v~~~----~g~~~~yd~lviAtG~~~~~ 138 (706)
..+....++ .. +...+++++.+...-+++..-.|... +++++.+|++|||||++|..
T Consensus 120 ~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P~~ 199 (542)
T 4b1b_A 120 KFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPHI 199 (542)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEECC
T ss_pred ccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCCCC
Confidence 001111111 11 12368999998888777654344333 33578999999999999987
Q ss_pred CCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEE
Q psy8791 139 DRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLY 218 (706)
Q Consensus 139 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv 218 (706)
|+.++.+ .+. .++.+.+. .+..++
T Consensus 200 P~~~~~~------------------------------------~~~----------~~ts~~~l----~l~~lP------ 223 (542)
T 4b1b_A 200 PDDVEGA------------------------------------KEL----------SITSDDIF----SLKKDP------ 223 (542)
T ss_dssp CSSSBTH------------------------------------HHH----------CBCHHHHT----TCSSCC------
T ss_pred CCcccCC------------------------------------Ccc----------ccCchhhh----ccccCC------
Confidence 7544410 000 01111111 011122
Q ss_pred ecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC--chhHHHHHHHHHHhCCceEEcCCceEEEeCCC
Q psy8791 219 TFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP--SPFYAEKIHDILIGRGVDVHKGKALVEIDLAN 296 (706)
Q Consensus 219 ~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~ 296 (706)
..-+.++|+. +++.....+++.|.. |+++.+. ++++ ++++.+.+++.|++.||+++++..+.+++..+
T Consensus 224 ---~~lvIIGgG~--IGlE~A~~~~~lG~~----VTii~~~-~~L~~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~ 293 (542)
T 4b1b_A 224 ---GKTLVVGASY--VALECSGFLNSLGYD----VTVAVRS-IVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMD 293 (542)
T ss_dssp ---CSEEEECCSH--HHHHHHHHHHHHTCC----EEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEET
T ss_pred ---ceEEEECCCH--HHHHHHHHHHhcCCe----EEEeccc-ccccccchhHHHHHHHHHHhhcceeecceEEEEEEecC
Confidence 2223344442 233334467788854 8888764 5555 78999999999999999999999999998877
Q ss_pred CEEEEEeCCCceEEeecEEEECCCCCchhh---hhcCCC-CCCCCc-eeeCccccccCCCCCEEEccccCCCCCCchHHH
Q psy8791 297 KEAVFKSEDKTERLPYAIMHVTPPMGPVPE---LATSRL-VDQSGY-VNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAA 371 (706)
Q Consensus 297 ~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~---~~~~~l-~~~~G~-i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~ 371 (706)
+.+.+. .++++++++|.|++|+|.+||.. ++..++ .+.+|. +.+|+ ++| |+.|||||+|||+.. .|.+++.
T Consensus 294 ~~~~v~-~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~-~~~-Ts~p~IyAiGDv~~~-~p~La~~ 369 (542)
T 4b1b_A 294 DKILVE-FSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADH-LSC-TNIPSIFAVGDVAEN-VPELAPV 369 (542)
T ss_dssp TEEEEE-ETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCT-TSB-CSSTTEEECTTSBTT-CCCCHHH
T ss_pred CeEEEE-EcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccc-ccc-ccCCCeEEeccccCC-chhHHHH
Confidence 666554 34677899999999999999953 344566 455555 46777 566 999999999999864 2468899
Q ss_pred HHHhHHHHHHHHHHHHcCCCCCCcccceeeEE
Q psy8791 372 VAGQCKVVYDNLSAVMKNRALPHEYNGYTSCP 403 (706)
Q Consensus 372 a~~qg~~~a~ni~~~l~g~~~~~~~~~~~~~~ 403 (706)
|..||+++++|+. .+.+....|.....|+
T Consensus 370 A~~eg~~aa~~i~---g~~~~~~d~~~iP~~v 398 (542)
T 4b1b_A 370 AIKAGEILARRLF---KDSDEIMDYSYIPTSI 398 (542)
T ss_dssp HHHHHHHHHHHHH---SCCCCCCCCSSCCEEE
T ss_pred HHHHHHHHHHHHh---cCCCcccCCCCCceEE
Confidence 9999999999995 3333334555544443
No 78
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.89 E-value=4.7e-24 Score=245.72 Aligned_cols=278 Identities=17% Similarity=0.129 Sum_probs=179.8
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCccccccccccc-CC-CcEEEEc
Q psy8791 26 SSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PS-GATWVKD 103 (706)
Q Consensus 26 ~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~-~v~~i~~ 103 (706)
+....++|||||||+|||+||..|+++ |++|+|||+++.....+.......+......+...+.... .. ++++..+
T Consensus 387 ~~~~~~~VvIIGgG~AGl~aA~~La~~--G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~ 464 (690)
T 3k30_A 387 AKESDARVLVVGAGPSGLEAARALGVR--GYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRE 464 (690)
T ss_dssp CCSSCCEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESS
T ss_pred cccccceEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEEC
Confidence 445568999999999999999999999 9999999999865544332222222222222222222222 23 6776553
Q ss_pred eeEEEEcCCCEEEeCCCeEEEecEEEEccccccc--------cCCCCCCcccccccccccccccccccCccCCccccccc
Q psy8791 104 KIVSFDPENNRVRTQAGSEISYEYMIVASGIQMY--------YDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFL 175 (706)
Q Consensus 104 ~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~--------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (706)
+ .+...++.++.||+||+|||+.+. .+.+||.+
T Consensus 465 ~---------~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~------------------------------ 505 (690)
T 3k30_A 465 S---------PMTGDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAE------------------------------ 505 (690)
T ss_dssp C---------CCCHHHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCT------------------------------
T ss_pred C---------eecHHHHhhcCCCEEEEcCCCccccccccccCCCCCCCCC------------------------------
Confidence 2 133334456789999999999854 45566621
Q ss_pred cCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeC--ChhHHHHHHHHHHHHHcCCCCCcEE
Q psy8791 176 RRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCG--GAPMKAVLIGDEYLRKHKKRDAAKL 253 (706)
Q Consensus 176 ~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~--g~~~~~~~~~~~~l~~~g~~~~~~v 253 (706)
. . .+ ++... ..+. ....++.++ .++ |+. .+......+.+.|. +|
T Consensus 506 -------~----~--~v---~~~~~---~l~~--~~~~g~~Vv-------ViG~ggG~--~g~e~A~~L~~~g~----~V 551 (690)
T 3k30_A 506 -------G----M--QV---LGPDD---LFAG--RLPDGKKVV-------VYDDDHYY--LGGVVAELLAQKGY----EV 551 (690)
T ss_dssp -------T----S--EE---ECHHH---HHTT--CCCSSSEEE-------EEECSCSS--HHHHHHHHHHHTTC----EE
T ss_pred -------C----C--cE---EcHHH---HhCC--CCCCCCEEE-------EEcCCCCc--cHHHHHHHHHhCCC----ee
Confidence 0 0 00 11111 0000 112222222 122 221 12333445666664 59
Q ss_pred EEEeCCCcCCC---chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhcC
Q psy8791 254 TYCTGMGVLFP---SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELATS 330 (706)
Q Consensus 254 ~l~~~~~~~~~---~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~ 330 (706)
+++++.+.+++ ++.....+.+.|+++||+++++++|++++.++..+..+.+++++++++|.||+|+|++|+..+...
T Consensus 552 tlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~~ 631 (690)
T 3k30_A 552 SIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPREELYLD 631 (690)
T ss_dssp EEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEECCHHHHH
T ss_pred EEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCCChHHHHH
Confidence 99999888765 356678889999999999999999999987653333323446778999999999999999544321
Q ss_pred CCCCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCCCC
Q psy8791 331 RLVDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNRAL 392 (706)
Q Consensus 331 ~l~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~~~ 392 (706)
+ +..+. .|+.|+|||+|||+.. +....|..||+.+|.||.+.+.+++.
T Consensus 632 -l-~~~~~---------~t~~~~VyaiGD~~~~---~~~~~A~~~g~~aa~~i~~~l~g~~~ 679 (690)
T 3k30_A 632 -L-VARRD---------AGEIASVRGIGDAWAP---GTIAAAVWSGRRAAEEFDAVLPSNDE 679 (690)
T ss_dssp -H-HHHHH---------HTSCSEEEECGGGTSC---BCHHHHHHHHHHHHHHTTCCCCCTTS
T ss_pred -H-hhhhc---------ccCCCCEEEEeCCCch---hhHHHHHHHHHHHHHHHHhhccCCCC
Confidence 1 11111 3788999999999984 45667999999999999988888765
No 79
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.89 E-value=6.3e-23 Score=227.03 Aligned_cols=254 Identities=11% Similarity=0.098 Sum_probs=168.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccc-cccCccc-cCccccccc-ccccCCCcEEEE-ceeE
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFT-LIGGGMK-KLSDSRRPM-KSVLPSGATWVK-DKIV 106 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~-~~~~~~~-~~~~~~~~~-~~~~~~~v~~i~-~~v~ 106 (706)
+||+|||||+||++||.+|++. ++|+|||++++..+..... ....+.. ...++...+ ..+ ..++++.. .+|.
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~---~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~ 184 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY---LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSAL 184 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT---CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEEC
T ss_pred CCEEEECccHHHHHHHHHHHhc---CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEE
Confidence 5899999999999999999987 8999999998754332210 0000100 111121121 222 45777654 6788
Q ss_pred EEEcCCCEEEe---CCCe--EEEecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccch
Q psy8791 107 SFDPENNRVRT---QAGS--EISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGL 181 (706)
Q Consensus 107 ~id~~~~~v~~---~~g~--~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 181 (706)
+++.+.+.+.+ ++++ .+.||+||+|||+.+..+++||.+ +
T Consensus 185 ~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~~~g~~-----------------------------------~ 229 (493)
T 1y56_A 185 GVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTMLFENND-----------------------------------M 229 (493)
T ss_dssp CCEECSSSEEEEEEETTEEEEEEESCEEECCCEEECCCCCTTTT-----------------------------------S
T ss_pred EEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCCCCCCCC-----------------------------------C
Confidence 88887764433 4453 689999999999999888888832 0
Q ss_pred hhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCc
Q psy8791 182 QEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGV 261 (706)
Q Consensus 182 ~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~ 261 (706)
+ .+ +....+....+......+.+++ .++|+.. +.
T Consensus 230 ------~--gv---~~~~~~~~~~~~~~~~~~~~vv--------ViGgG~~-----gl---------------------- 263 (493)
T 1y56_A 230 ------P--GV---FRRDFALEVMNVWEVAPGRKVA--------VTGSKAD-----EV---------------------- 263 (493)
T ss_dssp ------T--TE---EEHHHHHHHHHTSCBCSCSEEE--------EESTTHH-----HH----------------------
T ss_pred ------C--CE---EEcHHHHHHHHhcccCCCCEEE--------EECCCHH-----HH----------------------
Confidence 0 11 1111111111111011111111 1233311 11
Q ss_pred CCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchh-hhhcCCC---CCCCC
Q psy8791 262 LFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVP-ELATSRL---VDQSG 337 (706)
Q Consensus 262 ~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~-~~~~~~l---~~~~G 337 (706)
++.+++.||++++++.|.+++.+++ +..+.+++|+++++|.||+++|.+|+. ++..+++ .+++|
T Consensus 264 -----------e~~l~~~GV~v~~~~~v~~i~~~~~-v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g 331 (493)
T 1y56_A 264 -----------IQELERWGIDYVHIPNVKRVEGNEK-VERVIDMNNHEYKVDALIFADGRRPDINPITQAGGKLRFRRGY 331 (493)
T ss_dssp -----------HHHHHHHTCEEEECSSEEEEECSSS-CCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCCEEEETTE
T ss_pred -----------HHHHHhCCcEEEeCCeeEEEecCCc-eEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCCccccCCc
Confidence 1567788999999999999987654 222234578899999999999999995 6677776 25689
Q ss_pred cee-eCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHH
Q psy8791 338 YVN-VDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVM 387 (706)
Q Consensus 338 ~i~-vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l 387 (706)
++. ||+ +++ +.|+|||+|||+..+ .+..|..||+.+|.||...+
T Consensus 332 ~i~~vd~-~~~--s~~~vya~GD~~~~~---~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 332 YSPVLDE-YHR--IKDGIYVAGSAVSIK---PHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp EEECCCT-TSE--EETTEEECSTTTCCC---CHHHHHHHHHHHHHHHHHHT
T ss_pred eeecccc-ccC--cCCCEEEEeccCCcc---CHHHHHHHHHHHHHHHHHHc
Confidence 887 888 687 789999999999863 57789999999999998876
No 80
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.89 E-value=5.8e-23 Score=224.69 Aligned_cols=301 Identities=15% Similarity=0.128 Sum_probs=177.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCccccccccccc-CCCcEEEEceeEE
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PSGATWVKDKIVS 107 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~i~~~v~~ 107 (706)
..++|+|||||+||++||..|++..++++|+|||+++..+.. ....+.......+.+...+.+.+ ..+++++.+...
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~-~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v- 82 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGL-VRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEV- 82 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTH-HHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCB-
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCce-eecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEE-
Confidence 357999999999999999999998444999999999865321 11111111111222332333333 468888765332
Q ss_pred EEcCCCEEEeCCCeEEEecEEEEcccccc-ccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhc
Q psy8791 108 FDPENNRVRTQAGSEISYEYMIVASGIQM-YYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALD 186 (706)
Q Consensus 108 id~~~~~v~~~~g~~~~yd~lviAtG~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 186 (706)
.+.|++++. .+.||+||+|||+.+ ..+++||.+ . +..+..+. +...+.
T Consensus 83 ----~~~V~~~~~-~~~~d~lVlAtGs~~~~~~~ipG~~----~-------------~gv~~~~~---------~~~~~~ 131 (460)
T 1cjc_A 83 ----GRDVTVQEL-QDAYHAVVLSYGAEDHQALDIPGEE----L-------------PGVFSARA---------FVGWYN 131 (460)
T ss_dssp ----TTTBCHHHH-HHHSSEEEECCCCCEECCCCCTTTT----S-------------TTEEEHHH---------HHHHHT
T ss_pred ----eeEEEeccc-eEEcCEEEEecCcCCCCCCCCCCCC----C-------------CcEEEHHH---------HHHHhh
Confidence 233544443 468999999999985 668899831 0 00000000 000000
Q ss_pred CCCCCcccCCChhHHHHHHHHHH-hccCCCEEEecCCCCeeeCChhH--HHHHHHH----------------HHHHHcCC
Q psy8791 187 QPDSGVSTNYSPQYVEKTLRNLQ-HFQSGPVLYTFPATPIKCGGAPM--KAVLIGD----------------EYLRKHKK 247 (706)
Q Consensus 187 ~~~~~v~~~~~~~~~~~~~~~l~-~~~~g~~vv~~~~~~v~~~g~~~--~~~~~~~----------------~~l~~~g~ 247 (706)
.. ++ . +.+. .+ .++.+ ++++|+.. +++..+. +.+++.+.
T Consensus 132 ~~---------~d----~-~~~~~~~-~~~~v-------vVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~ 189 (460)
T 1cjc_A 132 GL---------PE----N-RELAPDL-SCDTA-------VILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRV 189 (460)
T ss_dssp TC---------GG----G-TTCCCCT-TSSEE-------EEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCC
T ss_pred cC---------cc----c-cccccCC-CCCEE-------EEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCC
Confidence 00 00 0 0000 11 12222 22344422 2222111 11223332
Q ss_pred CCCcEEEEEeCCCcC--------------CCc-------hh-----------------HHHHHHHHHHh-----------
Q psy8791 248 RDAAKLTYCTGMGVL--------------FPS-------PF-----------------YAEKIHDILIG----------- 278 (706)
Q Consensus 248 ~~~~~v~l~~~~~~~--------------~~~-------~~-----------------~~~~~~~~l~~----------- 278 (706)
.+|+++.+.+.+ ++. .+ +.+.+.+.+++
T Consensus 190 ---~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 266 (460)
T 1cjc_A 190 ---KTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRA 266 (460)
T ss_dssp ---CEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred ---cEEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCC
Confidence 159999877654 110 01 23344455555
Q ss_pred ---CCceEEcCCceEEEeCC--C-C--EEEEEe--------------CCCceEEeecEEEECCCCCchhhhhcCCC--CC
Q psy8791 279 ---RGVDVHKGKALVEIDLA--N-K--EAVFKS--------------EDKTERLPYAIMHVTPPMGPVPELATSRL--VD 334 (706)
Q Consensus 279 ---~gV~v~~~~~v~~i~~~--~-~--~v~~~~--------------~~~g~~i~~D~vI~a~G~~~~~~~~~~~l--~~ 334 (706)
+||+++++..+.+|..+ + . .+.+.. +++++++++|+||+++|++|++. .++ .+
T Consensus 267 ~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~l---~gl~~~d 343 (460)
T 1cjc_A 267 SASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRPI---DPSVPFD 343 (460)
T ss_dssp TCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCCC---CTTSCCB
T ss_pred CCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCCC---CCCcccc
Confidence 89999999999999765 2 2 233321 11226899999999999999983 455 57
Q ss_pred CCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCCCC
Q psy8791 335 QSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNRAL 392 (706)
Q Consensus 335 ~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~~~ 392 (706)
++|++.||+ ++|+.+.|+|||+|||+..+. .....|..+|..+|.||...+.+..+
T Consensus 344 ~~g~i~vn~-~~rt~~~p~vya~Gd~~~g~~-~~i~~a~~~g~~aa~~i~~~l~~~~~ 399 (460)
T 1cjc_A 344 PKLGVVPNM-EGRVVDVPGLYCSGWVKRGPT-GVITTTMTDSFLTGQILLQDLKAGHL 399 (460)
T ss_dssp TTTTBCCEE-TTEETTCTTEEECTHHHHCTT-CCHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred cCCCeeECC-CCcCcCCCCEEEEEeCCcCCC-ccHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 778899999 688444799999999997542 24568999999999999999876543
No 81
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.88 E-value=1.3e-22 Score=242.59 Aligned_cols=289 Identities=15% Similarity=0.102 Sum_probs=178.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCC-eEEEEcCCCCcccCcccccccCccccCcccccccccccCCCcEEEEceeEE
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKG-QVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 107 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~-~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~v~~ 107 (706)
..++|+|||||+||++||.+|++. |+ +|+|||++++..... ...++......+.+......+...+++++.++...
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~--G~~~Vtv~E~~~~~GG~~-~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 262 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARL--GYSDITIFEKQEYVGGLS-TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLS 262 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHT--TCCCEEEEESSSSCSTHH-HHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBS
T ss_pred CCCEEEEECccHHHHHHHHHHHhc--CCCcEEEEeCCCCCCccc-cccCCcccCCHHHHHHHHHHHHHCCcEEEcccEec
Confidence 357999999999999999999999 88 799999987543211 00111101111112222233445789998876542
Q ss_pred EEcCCCEEEeCCCeEEEecEEEEcccc-ccccCCC-CCCcccccccccccccccccccCccCCccccccccCccchhhhh
Q psy8791 108 FDPENNRVRTQAGSEISYEYMIVASGI-QMYYDRV-KGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEAL 185 (706)
Q Consensus 108 id~~~~~v~~~~g~~~~yd~lviAtG~-~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 185 (706)
.+.++++++.++.||+||+|||+ .+..+++ +|.+..+
T Consensus 263 ----~~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~------------------------------------- 301 (1025)
T 1gte_A 263 ----ENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQ------------------------------------- 301 (1025)
T ss_dssp ----TTSBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTTT-------------------------------------
T ss_pred ----cceEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCCC-------------------------------------
Confidence 13455555555789999999998 4665543 3421000
Q ss_pred cCCCCCcccCCChhHHHHHHHHHHh-----------ccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEE
Q psy8791 186 DQPDSGVSTNYSPQYVEKTLRNLQH-----------FQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLT 254 (706)
Q Consensus 186 ~~~~~~v~~~~~~~~~~~~~~~l~~-----------~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~ 254 (706)
.+ ++...+....+.-.. ..++++ ++++|+.. +......+.+.|. .+|+
T Consensus 302 -----gv---~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~V--------vVIGgG~~--g~e~A~~~~~~G~---~~Vt 360 (1025)
T 1gte_A 302 -----GF---YTSKDFLPLVAKSSKAGMCACHSPLPSIRGAV--------IVLGAGDT--AFDCATSALRCGA---RRVF 360 (1025)
T ss_dssp -----TE---EEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEE--------EEECSSHH--HHHHHHHHHHTTC---SEEE
T ss_pred -----CE---EEhHHHHHHHHhhcccccccccccccccCCcE--------EEECCChH--HHHHHHHHHHcCC---CEEE
Confidence 00 011111111000000 011222 22344422 2223334556663 2599
Q ss_pred EEeCCC-cCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEE---EEe---CCC-------c--eEEeecEEEEC
Q psy8791 255 YCTGMG-VLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAV---FKS---EDK-------T--ERLPYAIMHVT 318 (706)
Q Consensus 255 l~~~~~-~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~---~~~---~~~-------g--~~i~~D~vI~a 318 (706)
++++.+ .+++. .... .+.+++.||+++++..+.++..+++.+. +.. .++ | .++++|+||+|
T Consensus 361 vv~r~~~~~~~~--~~~e-~~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A 437 (1025)
T 1gte_A 361 LVFRKGFVNIRA--VPEE-VELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISA 437 (1025)
T ss_dssp EECSSCGGGCCS--CHHH-HHHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEEC
T ss_pred EEEecChhhCCC--CHHH-HHHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEEC
Confidence 999887 34431 1111 2467789999999999998875444332 211 011 2 47999999999
Q ss_pred CCCCch--hhhhc-CCC-CCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHc
Q psy8791 319 PPMGPV--PELAT-SRL-VDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMK 388 (706)
Q Consensus 319 ~G~~~~--~~~~~-~~l-~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~ 388 (706)
+|++|+ .++.. .++ .+++|+|.||+.+++ |+.|+|||+|||+.. +.++..|..||+.+|++|...+.
T Consensus 438 ~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~-Ts~~~VfA~GD~~~~--~~~~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 438 FGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQ-TSEPWVFAGGDIVGM--ANTTVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp SCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCB-CSSTTEEECSGGGCS--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCchhhhhcccCceECCCCCEEECCCCCc-cCCCCEEEeCCCCCC--chHHHHHHHHHHHHHHHHHHHHH
Confidence 999874 44455 477 778999999974577 899999999999986 44788999999999999998876
No 82
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.88 E-value=3.1e-23 Score=226.58 Aligned_cols=299 Identities=15% Similarity=0.120 Sum_probs=180.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHh-hcC----CCeEEEEcCCCCcccCcccccccCccccCccccccccccc-CCCcEEEEc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTS-KLG----KGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PSGATWVKD 103 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~-~~~----~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~i~~ 103 (706)
.++|+|||||+||++||..|++ ..+ +++|+|||+.+..+..+. ..+.........+...+.+.+ ..+++|+.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~-~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~ 81 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR-SGVAPDHPKIKSISKQFEKTAEDPRFRFFGN 81 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH-HTSCTTCTGGGGGHHHHHHHHTSTTEEEEES
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc-cccCCCCCCHHHHHHHHHHHHhcCCCEEEee
Confidence 4689999999999999999999 644 789999999986432221 111111222233333333333 468888775
Q ss_pred eeEEEEcCCCEEEeCCCeEEEecEEEEccccc-cccCCCCCCcccccccccccccccccccCccCCccccccccCccchh
Q psy8791 104 KIVSFDPENNRVRTQAGSEISYEYMIVASGIQ-MYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQ 182 (706)
Q Consensus 104 ~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 182 (706)
. . + .+.|+++++ ++.||+||+|||+. +..+++||.+ ..| .+..+. +.
T Consensus 82 v-~-v---~~~v~~~~~-~~~~d~lViAtG~~~~~~~~ipG~~----~~g-------------v~~~~~---------~~ 129 (456)
T 1lqt_A 82 V-V-V---GEHVQPGEL-SERYDAVIYAVGAQSDRMLNIPGED----LPG-------------SIAAVD---------FV 129 (456)
T ss_dssp C-C-B---TTTBCHHHH-HHHSSEEEECCCCCEECCCCCTTTT----STT-------------EEEHHH---------HH
T ss_pred E-E-E---CCEEEECCC-eEeCCEEEEeeCCCCCCCCCCCCCC----CCC-------------cEEHHH---------HH
Confidence 2 1 3 234666555 47899999999996 6777889831 000 000000 00
Q ss_pred hhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhH--HHHHHHH----------------HHHHH
Q psy8791 183 EALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPM--KAVLIGD----------------EYLRK 244 (706)
Q Consensus 183 ~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~--~~~~~~~----------------~~l~~ 244 (706)
..+... ++. ...+..+.+.++ ++++|+.. +++.... +.+++
T Consensus 130 ~~~~~~---------~d~----~~~~~~~~~~~v--------vVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~ 188 (456)
T 1lqt_A 130 GWYNAH---------PHF----EQVSPDLSGARA--------VVIGNGNVALDVARILLTDPDVLARTDIADHALESLRP 188 (456)
T ss_dssp HHHTTC---------GGG----TTCCCCCCSSEE--------EEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTT
T ss_pred hhhhcC---------ccc----ccchhhcCCCEE--------EEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHH
Confidence 000000 000 000001111112 22333322 2222111 11111
Q ss_pred cCCCCCcEEEEEeCCCcCCC---c------------------hhH------------------HHHHHHHHHh------C
Q psy8791 245 HKKRDAAKLTYCTGMGVLFP---S------------------PFY------------------AEKIHDILIG------R 279 (706)
Q Consensus 245 ~g~~~~~~v~l~~~~~~~~~---~------------------~~~------------------~~~~~~~l~~------~ 279 (706)
.+. .+|+++.+...+.. + +++ .+.+.+.+++ +
T Consensus 189 ~g~---~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 265 (456)
T 1lqt_A 189 RGI---QEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHR 265 (456)
T ss_dssp CCC---CEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSE
T ss_pred CCC---cEEEEEecCChhhhccChHHHHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCc
Confidence 221 26999988765421 1 121 2344455555 7
Q ss_pred CceEEcCCceEEEeCCCC--EEEEEeC-------------CCc--eEEeecEEEECCCCCchhhhhcCCC-CCCCCceee
Q psy8791 280 GVDVHKGKALVEIDLANK--EAVFKSE-------------DKT--ERLPYAIMHVTPPMGPVPELATSRL-VDQSGYVNV 341 (706)
Q Consensus 280 gV~v~~~~~v~~i~~~~~--~v~~~~~-------------~~g--~~i~~D~vI~a~G~~~~~~~~~~~l-~~~~G~i~v 341 (706)
||++++++.+.+|..+++ .+.+... .+| ++++||+||+++|++|++. .++ .+++|++.+
T Consensus 266 gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~l---~gl~~d~~g~i~v 342 (456)
T 1lqt_A 266 RMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVPT---PGLPFDDQSGTIP 342 (456)
T ss_dssp EEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCCC---TTSCCBTTTTBCC
T ss_pred eEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCCC---CCCcccCCCCeeE
Confidence 999999999999987643 2444321 134 5799999999999999983 355 577889999
Q ss_pred CccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCC
Q psy8791 342 DKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNR 390 (706)
Q Consensus 342 d~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~ 390 (706)
|+ .+++++.|+|||+|||+..|.. ....|..||..+|.||...+.+.
T Consensus 343 n~-~~rvt~~pgvya~GD~~~gp~~-~i~~a~~~g~~~a~~i~~~l~~~ 389 (456)
T 1lqt_A 343 NV-GGRINGSPNEYVVGWIKRGPTG-VIGTNKKDAQDTVDTLIKNLGNA 389 (456)
T ss_dssp EE-TTEETTCSSEEECTHHHHCSCS-CTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CC-CCcCCCCCCEEEEeccCCCCch-hHHHHHHHHHHHHHHHHHHHHhC
Confidence 99 6888899999999999976432 34468999999999999988654
No 83
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.88 E-value=3.9e-22 Score=236.75 Aligned_cols=282 Identities=15% Similarity=0.118 Sum_probs=179.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCccc-c-cccCccccCcccccc-cccccC-CCcEEEE-ce
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMF-T-LIGGGMKKLSDSRRP-MKSVLP-SGATWVK-DK 104 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~-~-~~~~~~~~~~~~~~~-~~~~~~-~~v~~i~-~~ 104 (706)
.+||||||||+||++||.+|++. +++|+|||+++.....+.. + ....+.. ..++... ..++.. .+++++. .+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~--G~~V~lie~~~~~GG~~~~~~k~~i~~~~-~~~~~~~~~~~l~~~~~v~~~~~~~ 204 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRS--GARVMLLDERAEAGGTLLDTAGEQIDGMD-SSAWIEQVTSELAEAEETTHLQRTT 204 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSSGGGGGSSCCEETTEE-HHHHHHHHHHHHHHSTTEEEESSEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--CCcEEEEeCCCCCCceeccCCccccCCCC-HHHHHHHHHHHHhhcCCcEEEeCCE
Confidence 46899999999999999999998 8999999999865422221 0 0011100 1111111 122223 3788776 47
Q ss_pred eEEEEcCCCEEE---------e--------CCCeEEEecEEEEccccccccCCCCCCcccccccccccccccccccCccC
Q psy8791 105 IVSFDPENNRVR---------T--------QAGSEISYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFF 167 (706)
Q Consensus 105 v~~id~~~~~v~---------~--------~~g~~~~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 167 (706)
|.+++.++.... + .++.++.||+||+|||+.+..+++||.+
T Consensus 205 V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~---------------------- 262 (965)
T 2gag_A 205 VFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENND---------------------- 262 (965)
T ss_dssp EEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCC----------------------
T ss_pred EEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCC----------------------
Confidence 888876543211 1 1123689999999999999888888832
Q ss_pred CccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCC
Q psy8791 168 PRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKK 247 (706)
Q Consensus 168 ~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~ 247 (706)
. + .+ +....+....+......+.+++| ++|++. ++.....+.+.|.
T Consensus 263 -------------~------~--gv---~~~~~~~~~l~~~~~~~gk~vvV--------iGgG~~--g~E~A~~L~~~G~ 308 (965)
T 2gag_A 263 -------------R------P--GI---MLAGAVRSYLNRYGVRAGARIAV--------ATTNDS--AYELVRELAATGG 308 (965)
T ss_dssp -------------S------T--TE---EEHHHHHHHHHTTCEESCSSEEE--------EESSTT--HHHHHHHHGGGTC
T ss_pred -------------C------C--CE---EEhHHHHHHHHhcCCCCCCeEEE--------EcCCHH--HHHHHHHHHHcCC
Confidence 0 0 11 11111211111111122233322 233321 2233344666664
Q ss_pred CCCcEEEEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeC--CCC--EEEEEe--CC--Cc--eEEeecEEEE
Q psy8791 248 RDAAKLTYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDL--ANK--EAVFKS--ED--KT--ERLPYAIMHV 317 (706)
Q Consensus 248 ~~~~~v~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~~--~v~~~~--~~--~g--~~i~~D~vI~ 317 (706)
. |+++++.+.+++ . .+.+++.||++++++.+.++.. +++ .+++.. .. +| +++++|.||+
T Consensus 309 ~----Vtvv~~~~~~~~--~-----~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~ 377 (965)
T 2gag_A 309 V----VAVIDARSSISA--A-----AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAV 377 (965)
T ss_dssp C----SEEEESCSSCCH--H-----HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEE
T ss_pred c----EEEEECCCccch--h-----HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEE
Confidence 3 889998887652 2 5678899999999999999986 333 344432 10 24 6899999999
Q ss_pred CCCCCchhhhhcCCCCCCCCceeeCccccc----cCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcC
Q psy8791 318 TPPMGPVPELATSRLVDQSGYVNVDKATLQ----HVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKN 389 (706)
Q Consensus 318 a~G~~~~~~~~~~~l~~~~G~i~vd~~~l~----~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g 389 (706)
++|.+|+..+.. ..+|.+.+|+ .++ .|+.|+|||+|||+..+. . ..|..||+.+|.||...+..
T Consensus 378 a~G~~P~~~l~~----~~~g~i~vd~-~~~~~v~~ts~p~IyAaGD~a~~~~--l-~~A~~~G~~aA~~i~~~lg~ 445 (965)
T 2gag_A 378 AGGFNPVVHLHS----QRQGKLDWDT-TIHAFVPADAVANQHLAGAMTGRLD--T-ASALSTGAATGAAAATAAGF 445 (965)
T ss_dssp ECCEEECCHHHH----HTTCCEEEET-TTTEEEECSCCTTEEECGGGGTCCS--H-HHHHHHHHHHHHHHHHHTTC
T ss_pred CCCcCcChHHHH----hCCCcEEEcC-cccccccCCCCCCEEEEEecCCchh--H-HHHHHHHHHHHHHHHHHcCC
Confidence 999999954432 1257899998 565 378999999999998743 4 48999999999999988743
No 84
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.88 E-value=4.2e-23 Score=238.67 Aligned_cols=310 Identities=13% Similarity=0.097 Sum_probs=181.7
Q ss_pred cccccccccccccc--ccccCCCCCCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccc
Q psy8791 4 LKLCPLKSYNLLSS--SFSTSPLSSSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMK 81 (706)
Q Consensus 4 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~ 81 (706)
..+|..+....... .+.+....+....++|+|||||+|||+||..|+++ +++|+|||+++.............+..
T Consensus 361 ~~~C~~n~~~g~e~~~~~~~~~~~~~~~~~~VvIIGgGpAGl~aA~~L~~~--G~~Vtlie~~~~~GG~~~~~~~~pg~~ 438 (729)
T 1o94_A 361 PMICTQNATAGEEYRRGWHPEKFRQTKNKDSVLIVGAGPSGSEAARVLMES--GYTVHLTDTAEKIGGHLNQVAALPGLG 438 (729)
T ss_dssp CCCCSSCTTTTTHHHHCCCTTCCCCCSSCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSTTTTHHHHTTSTTCG
T ss_pred ceeeccCccccccccccccccccccccCCceEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCCcCCeeeecccCCChH
Confidence 34566655443211 12122223344568999999999999999999998 899999999986432211111101110
Q ss_pred cCcccccccccccCCCcEEE---EceeEEEEcCCCEEEeCCCeEEEecEEEEcccccc--------ccCCCCCCcccccc
Q psy8791 82 KLSDSRRPMKSVLPSGATWV---KDKIVSFDPENNRVRTQAGSEISYEYMIVASGIQM--------YYDRVKGPSALINA 150 (706)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~i---~~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~--------~~~~~~g~~~~~~~ 150 (706)
..... .++....++.+ ...++.++. ++.++++++.++.||+||+|||+.+ ..+++||.+
T Consensus 439 ~~~~~----~~~~~~~i~~~~~~~~~~v~i~~-~~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~----- 508 (729)
T 1o94_A 439 EWSYH----RDYRETQITKLLKKNKESQLALG-QKPMTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGAD----- 508 (729)
T ss_dssp GGHHH----HHHHHHHHHHHHHHSTTCEEECS-CCCCCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCC-----
T ss_pred HHHHH----HHHHHHHHHHhhcccCCceEEEe-CeEEehhhccccCCCEEEEcCCCCcccccccCccCCCCCCcc-----
Confidence 00000 00110011110 012333433 3345555555688999999999984 456677721
Q ss_pred cccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHHHhccCCCEEEecCCCCeeeCCh
Q psy8791 151 LGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNLQHFQSGPVLYTFPATPIKCGGA 230 (706)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~ 230 (706)
+.. . .+ ++...+ .+ .....+.+++|. | ++|+
T Consensus 509 --------------------------------~~~--~--~v---~~~~~~---l~-~~~~~gk~VvVI-G-----~GgG 539 (729)
T 1o94_A 509 --------------------------------ASL--P--DQ---LTPEQV---MD-GKKKIGKRVVIL-N-----ADTY 539 (729)
T ss_dssp --------------------------------TTS--T--TE---ECHHHH---HH-CCSCCCSEEEEE-E-----CCCS
T ss_pred --------------------------------ccC--C--CE---EEHHHH---hc-CCCCCCCeEEEE-c-----CCCC
Confidence 000 0 11 111111 11 001122222221 1 1133
Q ss_pred hHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCC---chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeC-CC
Q psy8791 231 PMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFP---SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSE-DK 306 (706)
Q Consensus 231 ~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~---~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~-~~ 306 (706)
. .+......+.+.|. +|+++++.+ +++ .+.....+.+.|++.||++++++.+.+|+.++ +.+... .+
T Consensus 540 ~--~g~e~A~~l~~~G~----~Vtlv~~~~-l~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~--v~~~~~~~~ 610 (729)
T 1o94_A 540 F--MAPSLAEKLATAGH----EVTIVSGVH-LANYMHFTLEYPNMMRRLHELHVEELGDHFCSRIEPGR--MEIYNIWGD 610 (729)
T ss_dssp S--HHHHHHHHHHHTTC----EEEEEESSC-TTHHHHHTTCHHHHHHHHHHTTCEEECSEEEEEEETTE--EEEEETTCS
T ss_pred c--hHHHHHHHHHHcCC----EEEEEeccc-ccccccccccHHHHHHHHHhCCCEEEcCcEEEEEECCe--EEEEEecCC
Confidence 2 12333445666664 599999988 543 11125678888999999999999999998754 443321 22
Q ss_pred c-eE------------------EeecEEEECCCCCchhhhhcCCCCCCCCceeeCccccccCCCCCEEEccccCCCCCCc
Q psy8791 307 T-ER------------------LPYAIMHVTPPMGPVPELATSRLVDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSK 367 (706)
Q Consensus 307 g-~~------------------i~~D~vI~a~G~~~~~~~~~~~l~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~ 367 (706)
+ ++ +++|.||+|+|.+|+..+.. ++. ..+|+ +++ |+.|+|||+|||+. ++
T Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~-~l~-----~~vd~-~~~-t~~~~VyAiGD~~~---~~ 679 (729)
T 1o94_A 611 GSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWN-ELK-----ARESE-WAE-NDIKGIYLIGDAEA---PR 679 (729)
T ss_dssp CSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHHH-HHH-----HTGGG-TGG-GTCCEEEECGGGTS---CC
T ss_pred ceEEecccccccccccCCcceeeeCCEEEECCCCCCChHHHH-HHh-----hhccc-ccc-cCCCCeEEEeCccc---hh
Confidence 2 33 99999999999999954432 110 13677 677 89999999999997 35
Q ss_pred hHHHHHHhHHHHHHHHHHHHcCCCCCC
Q psy8791 368 TAAAVAGQCKVVYDNLSAVMKNRALPH 394 (706)
Q Consensus 368 ~~~~a~~qg~~~a~ni~~~l~g~~~~~ 394 (706)
++..|..||+.+|.||...+.+.+.|+
T Consensus 680 ~~~~A~~~G~~aA~~i~~~l~~~~~p~ 706 (729)
T 1o94_A 680 LIADATFTGHRVAREIEEANPQIAIPY 706 (729)
T ss_dssp CHHHHHHHHHHHHHTTTSSCTTSCCCC
T ss_pred hHHHHHHHHHHHHHHhhhhcccCCCCe
Confidence 677899999999999987776666555
No 85
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.87 E-value=2.8e-21 Score=212.14 Aligned_cols=269 Identities=16% Similarity=0.151 Sum_probs=165.6
Q ss_pred CcEEEECCCHHHHHHHHHHHh---hcCCCe---EEEEcCCCCcccCccc------------------ccc----cCc---
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTS---KLGKGQ---VSIVEPTDDHYYQPMF------------------TLI----GGG--- 79 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~---~~~~~~---Vtlie~~~~~~~~p~~------------------~~~----~~~--- 79 (706)
++|+|||||+||++||..|++ . |.+ |+|||+++........ ... ...
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~--G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~ 80 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEK--GAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLE 80 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHT--TCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhc--CCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcc
Confidence 689999999999999999999 6 888 9999998753211000 000 000
Q ss_pred ----------------cccCcccccccccccC-CCcE--EE-EceeEEEEcCCC----EEEeCC---C--eEEEecEEEE
Q psy8791 80 ----------------MKKLSDSRRPMKSVLP-SGAT--WV-KDKIVSFDPENN----RVRTQA---G--SEISYEYMIV 130 (706)
Q Consensus 80 ----------------~~~~~~~~~~~~~~~~-~~v~--~i-~~~v~~id~~~~----~v~~~~---g--~~~~yd~lvi 130 (706)
......+...+..+.. .+++ +. .++|+.|+...+ .|++.+ | .++.||+||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVv 160 (464)
T 2xve_A 81 FADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVC 160 (464)
T ss_dssp BTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEE
T ss_pred cCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEE
Confidence 0000001111111111 2454 43 478899987655 676654 4 5789999999
Q ss_pred ccc--cccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChhHHHHHHHHH
Q psy8791 131 ASG--IQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQYVEKTLRNL 208 (706)
Q Consensus 131 AtG--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~l 208 (706)
||| +.+..|.+||.+ .|+++.+++.. + .+.
T Consensus 161 AtG~~s~p~~p~ipG~~--------------------~~~g~~~hs~~----~--------------~~~---------- 192 (464)
T 2xve_A 161 CTGHFSTPYVPEFEGFE--------------------KFGGRILHAHD----F--------------RDA---------- 192 (464)
T ss_dssp CCCSSSSBCCCCCBTTT--------------------TCCSEEEEGGG----C--------------CCG----------
T ss_pred CCCCCCCCccCCCCCcc--------------------cCCceEEehhh----h--------------CCH----------
Confidence 999 788888888832 12222222111 0 000
Q ss_pred HhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCc
Q psy8791 209 QHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKA 288 (706)
Q Consensus 209 ~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~ 288 (706)
..+.+.+++| ++|+.. ...++ ..+.+.+. +|+++++.+.+++.. + ..||+++ ..
T Consensus 193 ~~~~~k~VvV--------VG~G~s-g~eiA-~~l~~~g~----~V~li~~~~~~~~~~-~---------~~~V~~~--~~ 246 (464)
T 2xve_A 193 LEFKDKTVLL--------VGSSYS-AEDIG-SQCYKYGA----KKLISCYRTAPMGYK-W---------PENWDER--PN 246 (464)
T ss_dssp GGGTTSEEEE--------ECCSTT-HHHHH-HHHHHTTC----SEEEEECSSCCCCCC-C---------CTTEEEC--SC
T ss_pred hHcCCCEEEE--------EcCCCC-HHHHH-HHHHHhCC----eEEEEEECCCCCCCC-C---------CCceEEc--CC
Confidence 0122222222 222221 12222 23455554 389999887776521 1 2588888 68
Q ss_pred eEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch-hhhhc-CCC-CCCCCceeeCcc-ccccCCCCCEEEccccCCCC
Q psy8791 289 LVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV-PELAT-SRL-VDQSGYVNVDKA-TLQHVKYSNVFAIGDCSNLP 364 (706)
Q Consensus 289 v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~-~~~~~-~~l-~~~~G~i~vd~~-~l~~~~~~~Ifa~GD~~~~~ 364 (706)
|++++.+ .|++. +|+++++|.||+|||++|+ +++.. .++ .+++|++ ++.+ ....++.|+|||+|||+..
T Consensus 247 V~~i~~~--~V~~~---dG~~i~~D~Vi~atG~~p~~~~l~~~~gl~~~~~~~v-~~~~~~~~~t~~p~i~aiGd~~~~- 319 (464)
T 2xve_A 247 LVRVDTE--NAYFA---DGSSEKVDAIILCTGYIHHFPFLNDDLRLVTNNRLWP-LNLYKGVVWEDNPKFFYIGMQDQW- 319 (464)
T ss_dssp EEEECSS--EEEET---TSCEEECSEEEECCCBCCCCTTBCTTTCCCCCSSSCC-SSEETTTEESSSTTEEECSCSCCS-
T ss_pred eEEEeCC--EEEEC---CCCEEeCCEEEECCCCCCCCCCcCcccccccCCCccc-ccccceEecCCCCCEEEEeCcccc-
Confidence 8999753 46553 7889999999999999999 66665 466 4444465 4431 1223889999999998874
Q ss_pred CCchHHHHHHhHHHHHHHHH
Q psy8791 365 TSKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 365 ~~~~~~~a~~qg~~~a~ni~ 384 (706)
.....|..||+.+|+++.
T Consensus 320 --~~~~~a~~qa~~~a~~l~ 337 (464)
T 2xve_A 320 --YSFNMFDAQAWYARDVIM 337 (464)
T ss_dssp --SCHHHHHHHHHHHHHHHT
T ss_pred --cchHHHHHHHHHHHHHHc
Confidence 356788999999999994
No 86
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.85 E-value=6.8e-21 Score=209.89 Aligned_cols=111 Identities=6% Similarity=-0.026 Sum_probs=76.5
Q ss_pred CCceEEcCCceEEEeCCCCE--EEEEeCCCce--EEeecEEEECCCCCch---hhhhcCCCCCCCCceeeCccccccCC-
Q psy8791 279 RGVDVHKGKALVEIDLANKE--AVFKSEDKTE--RLPYAIMHVTPPMGPV---PELATSRLVDQSGYVNVDKATLQHVK- 350 (706)
Q Consensus 279 ~gV~v~~~~~v~~i~~~~~~--v~~~~~~~g~--~i~~D~vI~a~G~~~~---~~~~~~~l~~~~G~i~vd~~~l~~~~- 350 (706)
.||++++++.|++++.+++. +.+....+|+ ++++|.||+|+|++|+ +++...... .|++.||+ ++++..
T Consensus 329 ~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~--~g~i~v~~-~~~~~~~ 405 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEY--LGDHEIGR-DYRLQTD 405 (463)
T ss_dssp CCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGG--BC--CCCT-TSBCCBC
T ss_pred CCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHH--hCCcccCc-ccccccC
Confidence 69999999999999876554 3333333454 5999999999999998 444443221 18899998 688654
Q ss_pred ---CCCEEEccccCCC---CCCchHHHHHHhHHHHHHHHHHHHcCCCC
Q psy8791 351 ---YSNVFAIGDCSNL---PTSKTAAAVAGQCKVVYDNLSAVMKNRAL 392 (706)
Q Consensus 351 ---~~~Ifa~GD~~~~---~~~~~~~~a~~qg~~~a~ni~~~l~g~~~ 392 (706)
.|+|||+|||... ..|.....|.+++++++..+.+...+.++
T Consensus 406 ~~~~~~Ifa~G~~~~~~g~~~~~l~~~a~r~~~i~~~~~~~~~~~~~~ 453 (463)
T 3s5w_A 406 ERCKVAIYAQGFSQASHGLSDTLLSVLPVRAEEISGSLYQHLKPGTAA 453 (463)
T ss_dssp TTBCSEEEESSCCHHHHCTTTTSSTTHHHHHHHHHHHHHHHHC-----
T ss_pred CCCCCeEEEcCCCcccCCcCccchhHHHHHHHHHHHHHHhhcCCchhH
Confidence 4569999999752 34567778999999988888766555443
No 87
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.84 E-value=1.2e-20 Score=216.70 Aligned_cols=261 Identities=18% Similarity=0.159 Sum_probs=165.8
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcccccccCccccCcccccccccc-cCCCcEEEEcee
Q psy8791 27 SSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSV-LPSGATWVKDKI 105 (706)
Q Consensus 27 ~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~i~~~v 105 (706)
....++|+|||||+||++||..|+++ +++|+|||+++++.+.+.+.....+..........+... ...+++++.++.
T Consensus 370 ~~~~~~vvIIGgG~AGl~aA~~l~~~--g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 447 (671)
T 1ps9_A 370 AVQKKNLAVVGAGPAGLAFAINAAAR--GHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHT 447 (671)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHTT--TCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCC
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcE
Confidence 34568999999999999999999998 899999999987655443322211111111111112222 235788877553
Q ss_pred EEEEcCCCEEEeCCCeEE-EecEEEEccccccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhh
Q psy8791 106 VSFDPENNRVRTQAGSEI-SYEYMIVASGIQMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEA 184 (706)
Q Consensus 106 ~~id~~~~~v~~~~g~~~-~yd~lviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 184 (706)
+.. ..+ .||+||+|||+.+..|++||.+ .
T Consensus 448 v~~------------~~~~~~d~lviAtG~~p~~~~i~G~~-------------------------------------~- 477 (671)
T 1ps9_A 448 VTA------------DQLQAFDETILASGIVPRTPPIDGID-------------------------------------H- 477 (671)
T ss_dssp CCS------------SSSCCSSEEEECCCEEECCCCCBTTT-------------------------------------S-
T ss_pred ecH------------HHhhcCCEEEEccCCCcCCCCCCCCC-------------------------------------C-
Confidence 211 123 8999999999999988899832 0
Q ss_pred hcCCCCCcccCCChhHHHHHHHHHHh-ccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCC---------------
Q psy8791 185 LDQPDSGVSTNYSPQYVEKTLRNLQH-FQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKR--------------- 248 (706)
Q Consensus 185 ~~~~~~~v~~~~~~~~~~~~~~~l~~-~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~--------------- 248 (706)
. .+.+ .. +.+.. ...++.+ +.++|+.. ++.....+.+.|..
T Consensus 478 ---~--~v~~---~~------~~l~~~~~~~~~V-------vVIGgG~~--g~E~A~~l~~~G~~vtv~~~~~~~~~g~~ 534 (671)
T 1ps9_A 478 ---P--KVLS---YL------DVLRDKAPVGNKV-------AIIGCGGI--GFDTAMYLSQPGESTSQNIAGFCNEWGID 534 (671)
T ss_dssp ---T--TEEE---HH------HHHTSCCCCCSEE-------EEECCHHH--HHHHHHHHTCCSSCGGGCHHHHHHHTTBC
T ss_pred ---C--cEee---HH------HHhhCCCCCCCeE-------EEECCChh--HHHHHHHHHhcCCCcccchhhhhhhhccc
Confidence 0 0110 00 01111 1112222 22344432 12222233333311
Q ss_pred ------------------CCcEEEEEeCCCcCCC---chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCc
Q psy8791 249 ------------------DAAKLTYCTGMGVLFP---SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKT 307 (706)
Q Consensus 249 ------------------~~~~v~l~~~~~~~~~---~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g 307 (706)
...+++++++.+..++ ++.....+++.|++.||++++++.+++++.++ +++. .+|
T Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~--v~~~--~~G 610 (671)
T 1ps9_A 535 SSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDG--LHVV--ING 610 (671)
T ss_dssp TTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTE--EEEE--ETT
T ss_pred ccccccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCe--EEEe--cCC
Confidence 1246888888766553 45667778899999999999999999998653 5543 255
Q ss_pred --eEEeecEEEECCCCCchhhhhcCCCCCCCCceeeCccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHH
Q psy8791 308 --ERLPYAIMHVTPPMGPVPELATSRLVDQSGYVNVDKATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNL 383 (706)
Q Consensus 308 --~~i~~D~vI~a~G~~~~~~~~~~~l~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni 383 (706)
+++++|.||+|+|++|+..+.. .++ ...++||++|||+... ++.+..|++||..+|.||
T Consensus 611 ~~~~i~~D~Vi~a~G~~p~~~l~~---------------~l~-~~g~~v~aiGD~~~~~-~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 611 ETQVLAVDNVVICAGQEPNRALAQ---------------PLI-DSGKTVHLIGGCDVAM-ELDARRAIAQGTRLALEI 671 (671)
T ss_dssp EEEEECCSEEEECCCEEECCTTHH---------------HHH-TTTCCEEECGGGTCCS-SCCHHHHHHHHHHHHHHC
T ss_pred eEEEEeCCEEEECCCccccHHHHH---------------HHH-hcCCCEEEECCcCccC-chhHHHHHHHHHHHHHhC
Confidence 6899999999999999954332 012 1237899999999875 346889999999999985
No 88
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.84 E-value=2e-20 Score=208.36 Aligned_cols=104 Identities=11% Similarity=0.166 Sum_probs=76.3
Q ss_pred hCCceEEc--CCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchh-hhhcCCCCCCCCce---------eeCccc
Q psy8791 278 GRGVDVHK--GKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVP-ELATSRLVDQSGYV---------NVDKAT 345 (706)
Q Consensus 278 ~~gV~v~~--~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~-~~~~~~l~~~~G~i---------~vd~~~ 345 (706)
+.||+++. +..|++|++++ +++ .||+++++|+||+|||+.++. ++...++...+|.. .+-. .
T Consensus 342 ~~nV~lv~~~~~~I~~it~~g--v~~---~dG~~~~~DvIV~ATGf~~~~~~~~~~~i~g~~G~~l~~~w~~~~~~y~-g 415 (540)
T 3gwf_A 342 RPNVEAVAIKENPIREVTAKG--VVT---EDGVLHELDVLVFATGFDAVDGNYRRIEIRGRDGLHINDHWDGQPTSYL-G 415 (540)
T ss_dssp STTEEEEETTTSCEEEECSSE--EEE---TTCCEEECSEEEECCCBSCSSHHHHTSEEECGGGCBHHHHTSSSCCCBT-T
T ss_pred CCCEEEEeCCCCCccEEecCe--EEc---CCCCEEECCEEEECCccCccccCcCcceEECCCCcCHHHhhccChhhcc-c
Confidence 45899985 67999998765 554 489999999999999999986 66655444444422 1222 3
Q ss_pred cccCCCCCEEEc-cccCCCCCCchHHHHHHhHHHHHHHHHHHHcC
Q psy8791 346 LQHVKYSNVFAI-GDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKN 389 (706)
Q Consensus 346 l~~~~~~~Ifa~-GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g 389 (706)
+.+.++||+|++ |..+. .......+..|++++++.|.....+
T Consensus 416 ~~v~gfPN~f~~~Gp~~~--~~s~~~~~e~q~~~i~~~i~~~~~~ 458 (540)
T 3gwf_A 416 VSTANFPNWFMVLGPNGP--FTNLPPSIETQVEWISDTIGYAERN 458 (540)
T ss_dssp TBCTTCTTEEESSCSSCB--CSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCCCceEEEecCCCC--CccHHHHHHHHHHHHHHHHHHHHHC
Confidence 667899999999 87665 2335567889999999999777654
No 89
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.83 E-value=8.2e-20 Score=200.03 Aligned_cols=274 Identities=15% Similarity=0.136 Sum_probs=162.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCC--eEEEEcCCCCcc----cCcccc---ccc---------------------C
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKG--QVSIVEPTDDHY----YQPMFT---LIG---------------------G 78 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~--~Vtlie~~~~~~----~~p~~~---~~~---------------------~ 78 (706)
..++|+|||||++|+++|..|++. +. +|+|||+++... +.+... .++ .
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~--G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~ 82 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAE--KAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPS 82 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT--TCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhc--CCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccC
Confidence 357999999999999999999998 77 999999986421 111000 000 0
Q ss_pred cccc------------C------c---------ccccccccccC-CCcEEE-EceeEEEEcCCC--EEEeCC---Ce---
Q psy8791 79 GMKK------------L------S---------DSRRPMKSVLP-SGATWV-KDKIVSFDPENN--RVRTQA---GS--- 121 (706)
Q Consensus 79 ~~~~------------~------~---------~~~~~~~~~~~-~~v~~i-~~~v~~id~~~~--~v~~~~---g~--- 121 (706)
..+. . . .+...+.++.. .+..+. ..+|++|+...+ .|++.+ |.
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~ 162 (447)
T 2gv8_A 83 PLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPIS 162 (447)
T ss_dssp CCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEE
T ss_pred chhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeE
Confidence 0000 0 0 00000011111 122232 478888887655 566654 65
Q ss_pred EEEecEEEEcccc--ccccCCCCCCcccccccccccccccccccCccCCccccccccCccchhhhhcCCCCCcccCCChh
Q psy8791 122 EISYEYMIVASGI--QMYYDRVKGPSALINALGHCDLVRSFVTFPLFFPRRTLDFLRRPSGLQEALDQPDSGVSTNYSPQ 199 (706)
Q Consensus 122 ~~~yd~lviAtG~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~ 199 (706)
++.||+||+|||. .+..|.+||.+ ++. ..|+.+.+++.. ..+..
T Consensus 163 ~~~~d~VVvAtG~~s~p~~p~i~G~~--~~~--------------~~~~g~v~~~~~------------------~~~~~ 208 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYIPNIKGLD--EYA--------------KAVPGSVLHSSL------------------FREPE 208 (447)
T ss_dssp EEEESEEEECCCSSSSBCBCCCBTHH--HHH--------------HHSTTSEEEGGG------------------CCCGG
T ss_pred EEEeCEEEECCCCCCCCCCCCCCChh--hhh--------------ccCCccEEEecc------------------cCChh
Confidence 7899999999998 77778888831 000 000111111100 00110
Q ss_pred HHHHHHHHHHhccCCCEEEecCCCCeeeCChhHHHHHHHHHHHHHcCCCCCcEEEEEeCCCcCCCchhHHHHHHHHHHhC
Q psy8791 200 YVEKTLRNLQHFQSGPVLYTFPATPIKCGGAPMKAVLIGDEYLRKHKKRDAAKLTYCTGMGVLFPSPFYAEKIHDILIGR 279 (706)
Q Consensus 200 ~~~~~~~~l~~~~~g~~vv~~~~~~v~~~g~~~~~~~~~~~~l~~~g~~~~~~v~l~~~~~~~~~~~~~~~~~~~~l~~~ 279 (706)
.+.+.+++ +++|+.. ...++. .+.+.+.. .|+++++.+.+ +++.
T Consensus 209 ----------~~~~k~Vv--------VvG~G~s-g~e~A~-~l~~~~~~---~V~l~~r~~~~-------------l~~~ 252 (447)
T 2gv8_A 209 ----------LFVGESVL--------VVGGASS-ANDLVR-HLTPVAKH---PIYQSLLGGGD-------------IQNE 252 (447)
T ss_dssp ----------GGTTCCEE--------EECSSHH-HHHHHH-HHTTTSCS---SEEEECTTCCS-------------CBCS
T ss_pred ----------hcCCCEEE--------EEccCcC-HHHHHH-HHHHHhCC---cEEEEeCCCCc-------------CCCC
Confidence 12233322 2344422 222222 34444421 28888887655 3456
Q ss_pred CceEEcCCceEEEeCCCCEEEEEeCCCceE-EeecEEEECCCCCch-hh-----hhcC--CCCCCCCceeeCcccccc--
Q psy8791 280 GVDVHKGKALVEIDLANKEAVFKSEDKTER-LPYAIMHVTPPMGPV-PE-----LATS--RLVDQSGYVNVDKATLQH-- 348 (706)
Q Consensus 280 gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~-i~~D~vI~a~G~~~~-~~-----~~~~--~l~~~~G~i~vd~~~l~~-- 348 (706)
||.+ ...|+++..+++.|++. +|++ +++|.||+|+|++|+ ++ +... ++. .++++.++. +.++
T Consensus 253 ~i~~--~~~v~~~~~~~~~v~~~---dG~~~~~~D~vi~atG~~~~~~~l~~~~l~~~~~~i~-~~~~~~~~~-~~~v~~ 325 (447)
T 2gv8_A 253 SLQQ--VPEITKFDPTTREIYLK---GGKVLSNIDRVIYCTGYLYSVPFPSLAKLKSPETKLI-DDGSHVHNV-YQHIFY 325 (447)
T ss_dssp SEEE--ECCEEEEETTTTEEEET---TTEEECCCSEEEECCCBCCCCCCHHHHSCCSTTTCCC-SSSSSCCSE-ETTTEE
T ss_pred CeEE--ecCeEEEecCCCEEEEC---CCCEeccCCEEEECCCCCcCCCCCcccccccccCcee-cCCCccccc-cccccc
Confidence 7764 46789997655556653 6776 799999999999999 66 5443 332 245566665 3442
Q ss_pred CCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHH
Q psy8791 349 VKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLS 384 (706)
Q Consensus 349 ~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~ 384 (706)
++.|+||++||+.... ++..|..||+.+|++|.
T Consensus 326 ~~~p~l~~~G~~~~~~---~~~~a~~qa~~~a~~~~ 358 (447)
T 2gv8_A 326 IPDPTLAFVGLALHVV---PFPTSQAQAAFLARVWS 358 (447)
T ss_dssp TTCTTEEESSCCBSSC---HHHHHHHHHHHHHHHHT
T ss_pred CCCCcEEEEecccccc---CchHHHHHHHHHHHHHc
Confidence 7899999999998763 67889999999999994
No 90
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.79 E-value=3.3e-18 Score=162.79 Aligned_cols=119 Identities=13% Similarity=0.123 Sum_probs=96.7
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhcCCC-CCCCCceeeCcc
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELATSRL-VDQSGYVNVDKA 344 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~~l-~~~~G~i~vd~~ 344 (706)
+.+.+.+.+.+++.||+++.+ +|++++.+++.+.+ .+++| ++++|.||+|+|.+|+ .....++ .+ +|++.||+
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v-~~~~g-~i~ad~vI~A~G~~~~-~~~~~g~~~~-~g~i~vd~- 129 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEV-ETEEG-VEKAERLLLCTHKDPT-LPSLLGLTRR-GAYIDTDE- 129 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEE-ECSSC-EEEEEEEEECCTTCCH-HHHHHTCCEE-TTEECCCT-
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEE-EECCC-EEEECEEEECCCCCCC-ccccCCCCcc-CceEEeCC-
Confidence 345566777888899999999 99999865544443 34466 8999999999999985 3455566 55 89999999
Q ss_pred ccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCCCC
Q psy8791 345 TLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNRAL 392 (706)
Q Consensus 345 ~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~~~ 392 (706)
+++ |+.|+|||+|||+..+. +++..|..||+.+|.||...+.+++.
T Consensus 130 ~~~-t~~~~i~a~GD~~~~~~-~~~~~A~~~g~~aa~~i~~~~~~~~~ 175 (180)
T 2ywl_A 130 GGR-TSYPRVYAAGVARGKVP-GHAIISAGDGAYVAVHLVSDLRGEPY 175 (180)
T ss_dssp TCB-CSSTTEEECGGGGTCCS-CCHHHHHHHHHHHHHHHHHHHHTSCC
T ss_pred CCC-cCCCCEEEeecccCcch-hhHHHHHHhHHHHHHHHHHHhhhccc
Confidence 688 79999999999999754 37788999999999999999988764
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.79 E-value=2.2e-18 Score=192.31 Aligned_cols=105 Identities=13% Similarity=0.186 Sum_probs=70.9
Q ss_pred hCCceEE--cCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchh-hhhcCCCCCCCCceeeCc---------cc
Q psy8791 278 GRGVDVH--KGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVP-ELATSRLVDQSGYVNVDK---------AT 345 (706)
Q Consensus 278 ~~gV~v~--~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~-~~~~~~l~~~~G~i~vd~---------~~ 345 (706)
+.+|+++ ....|++|++++ +.. ++| ++++|+||+|||+.+++ ++...++...+| +.+++ ..
T Consensus 355 ~~~V~lvd~~~~~I~~it~~g--v~~---~dG-~~~~D~iI~ATGf~~~~~~~~~~~i~g~~G-~~l~~~w~~~~~~y~g 427 (549)
T 4ap3_A 355 RDNVELVDLRSTPIVGMDETG--IVT---TGA-HYDLDMIVLATGFDAMTGSLDKLEIVGRGG-RTLKETWAAGPRTYLG 427 (549)
T ss_dssp STTEEEEETTTSCEEEEETTE--EEE---SSC-EEECSEEEECCCEEESSTTGGGSEEECGGG-CBHHHHTTTSCCCBTT
T ss_pred CCCEEEEeCCCCCceEEeCCc--EEe---CCC-ceecCEEEECCcccccccccCceeEECCCC-cCHHHhhccchhhccc
Confidence 3488888 347899998755 544 378 99999999999999986 666554444444 33331 13
Q ss_pred cccCCCCCEEEc-cccCCCCCCchHHHHHHhHHHHHHHHHHHHcC
Q psy8791 346 LQHVKYSNVFAI-GDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKN 389 (706)
Q Consensus 346 l~~~~~~~Ifa~-GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g 389 (706)
+.+.++||+|.+ |-.+..........+..|++++++.|.....+
T Consensus 428 ~~~~gfPN~f~~~Gp~~~~~~~s~~~~~e~~~~~i~~~i~~~~~~ 472 (549)
T 4ap3_A 428 LGIDGFPNFFNLTGPGSPSVLANMVLHSELHVDWVADAIAYLDAR 472 (549)
T ss_dssp TBCTTCTTEEETTCTTSCGGGSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCCCcEEEEeCCCCCCcCccHHHHHHHHHHHHHHHHHHHHHC
Confidence 456789999998 43322112234556788999999988766544
No 92
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.78 E-value=6.9e-19 Score=196.24 Aligned_cols=108 Identities=12% Similarity=0.090 Sum_probs=71.5
Q ss_pred HHhCCceEEc--CCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch-hhhhcCCCCCCCCceeeCc--------c
Q psy8791 276 LIGRGVDVHK--GKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV-PELATSRLVDQSGYVNVDK--------A 344 (706)
Q Consensus 276 l~~~gV~v~~--~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~-~~~~~~~l~~~~G~i~vd~--------~ 344 (706)
|.+.||+++. +..|++|++++ +.. ++| ++++|+||+|||+.++ ..+....+...+|....+. .
T Consensus 348 l~~~nV~lv~~~~~~I~~it~~g--v~~---~dG-~~~~D~IV~ATGf~~~~~~~~~~~i~g~~G~~l~~~w~~~~~~y~ 421 (545)
T 3uox_A 348 YNRDNVHLVDIREAPIQEVTPEG--IKT---ADA-AYDLDVIIYATGFDAVTGSLDRIDIRGKDNVRLIDAWAEGPSTYL 421 (545)
T ss_dssp TTSTTEEEEETTTSCEEEEETTE--EEE---SSC-EEECSEEEECCCCBSSSCSCTTSEEECGGGCBHHHHTTTSCCCBT
T ss_pred hcCCCEEEEecCCCCceEEccCe--EEe---CCC-eeecCEEEECCccccccccCCCceEECCCCccHHHhhccccceee
Confidence 3345889986 78899998765 554 378 9999999999999986 3443333444445332211 1
Q ss_pred ccccCCCCCEEEcc-ccCCCCCCchHHHHHHhHHHHHHHHHHHHcC
Q psy8791 345 TLQHVKYSNVFAIG-DCSNLPTSKTAAAVAGQCKVVYDNLSAVMKN 389 (706)
Q Consensus 345 ~l~~~~~~~Ifa~G-D~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g 389 (706)
.+.+.++||+|.+. .............+..|++++++.|.....+
T Consensus 422 g~~~~gfPN~f~~~gp~~~~~~~s~~~~~e~~~~~i~~~i~~~~~~ 467 (545)
T 3uox_A 422 GLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLRMISYMKDN 467 (545)
T ss_dssp TTBCTTCTTEEECSSGGGTGGGSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCcEEEEeCCCCCCccccHHHHHHHHHHHHHHHHHHHHHC
Confidence 34567899999984 2221111234557789999999999776654
No 93
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.78 E-value=1e-19 Score=200.98 Aligned_cols=170 Identities=18% Similarity=0.253 Sum_probs=120.7
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
+++|||||||+||+++|++|++. +.+|+|||++++|.|+|+++.+.+|......+..|++.++
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~--~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~--------------- 104 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTK--KYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFA--------------- 104 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTT--TCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHH---------------
T ss_pred CCCEEEECCcHHHHHHHHHhhhC--CCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHH---------------
Confidence 45899999999999999999876 7899999999999999998877777654444433321110
Q ss_pred CCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhccCCcEEEeceEEEEEcCCCeEEcC---------
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDPENNRVRTQ--------- 617 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~V~~~--------- 617 (706)
.....+++|++++|+.||+++++|++.
T Consensus 105 --------------------------------------------~~~~~~v~~~~~~v~~ID~~~k~V~l~~~~~~~~~~ 140 (502)
T 4g6h_A 105 --------------------------------------------LKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLY 140 (502)
T ss_dssp --------------------------------------------TTCSSCEEEEEEEEEEEEGGGTEEEEEEEEEEEECS
T ss_pred --------------------------------------------HhhcCCeEEEEEEEEEEEhhhCEEEEeecccceeec
Confidence 011247899999999999999998753
Q ss_pred -----------CCcEEeeCEEEEecCcccCccCCCCchhh------hcccccccccc-cCccchhh-------hccCccE
Q psy8791 618 -----------AGSEISYEYMIVASGIQMYYDRVKGGTTS------LEDRGKMRGVS-DGFSTVTW-------EQKHKQY 672 (706)
Q Consensus 618 -----------~g~~i~yd~lViAtGs~~~~p~i~G~~~~------~~~~~~~~~~~-~~~~~~~~-------~~~~k~v 672 (706)
++.+++||+||||||++|+.+++||+.+. ++++..++... ..++.... .....++
T Consensus 141 ~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~v 220 (502)
T 4g6h_A 141 QPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSI 220 (502)
T ss_dssp SSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHHHHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEE
T ss_pred ccccccccccCCceEEeCCEEEEcCCcccccCCccCcccccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccce
Confidence 45689999999999999999999998642 22222222211 11111110 0122368
Q ss_pred EEE-----cHHHHHHHHHHHhhhhhhhccc
Q psy8791 673 QLV-----SPEIRAKAYDLTKRKMKKEAQW 697 (706)
Q Consensus 673 vVi-----G~E~A~~l~~~~~~~~~~~~~~ 697 (706)
+|| |+|+|++|+++..+.+++.++.
T Consensus 221 vVvGgG~tGvE~A~~l~~~~~~~l~~~~~~ 250 (502)
T 4g6h_A 221 VVVGGGPTGVEAAGELQDYVHQDLRKFLPA 250 (502)
T ss_dssp EEECCSHHHHHHHHHHHHHHHHTHHHHCHH
T ss_pred EEECCCcchhhhHHHHHHHHHHHHHhhccc
Confidence 888 8999999999987766655443
No 94
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.78 E-value=6.5e-18 Score=189.21 Aligned_cols=107 Identities=13% Similarity=0.141 Sum_probs=79.7
Q ss_pred hCCceEE--cCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch-hhhhcCCCCCCCCceeeC-------c-ccc
Q psy8791 278 GRGVDVH--KGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV-PELATSRLVDQSGYVNVD-------K-ATL 346 (706)
Q Consensus 278 ~~gV~v~--~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~-~~~~~~~l~~~~G~i~vd-------~-~~l 346 (706)
+.+|+++ .+..|++|+.++ |++. | +++++|+||||||++++ ..+...++.+.+|....+ . ..+
T Consensus 350 ~~~v~lv~~~~~~i~~i~~~g--v~~~---d-~~~~~D~ii~atG~~~~~~~~~~~~i~g~~G~~l~~~w~~~~~~y~~~ 423 (542)
T 1w4x_A 350 RDNVHLVDTLSAPIETITPRG--VRTS---E-REYELDSLVLATGFDALTGALFKIDIRGVGNVALKEKWAAGPRTYLGL 423 (542)
T ss_dssp STTEEEEETTTSCEEEECSSE--EEES---S-CEEECSEEEECCCCCCTTHHHHTSEEECGGGCBHHHHTTTSCCCBTTT
T ss_pred CCCEEEEecCCCCceEEcCCe--EEeC---C-eEEecCEEEEcCCccccccCcCceeeECCCCCCHHHhhcCchheeccc
Confidence 3568877 367899998654 6553 6 88999999999999996 566655556666655553 1 136
Q ss_pred ccCCCCCEEEc-cccCCCCCCchHHHHHHhHHHHHHHHHHHHcCC
Q psy8791 347 QHVKYSNVFAI-GDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNR 390 (706)
Q Consensus 347 ~~~~~~~Ifa~-GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~ 390 (706)
.+.++||+|++ ||.+....+.....+..|++++|++|....++.
T Consensus 424 ~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~~i~~~~~~~ 468 (542)
T 1w4x_A 424 STAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIAYMFKNG 468 (542)
T ss_dssp BCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHHHHHHHHHHCC
Confidence 67889999998 998754334456789999999999999887654
No 95
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.75 E-value=2.9e-19 Score=194.45 Aligned_cols=114 Identities=26% Similarity=0.542 Sum_probs=95.4
Q ss_pred cccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccCCC
Q psy8791 469 HLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDSS 548 (706)
Q Consensus 469 ~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 548 (706)
+|||||||+||+++|.+|++..++.+|+|||+++++.|.|+++.+.+|.....++
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i------------------------- 58 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDI------------------------- 58 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGS-------------------------
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHh-------------------------
Confidence 6999999999999999999987789999999999999888877666665443333
Q ss_pred ceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCcEEeeCEE
Q psy8791 549 YTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGSEISYEYM 627 (706)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~~i~yd~l 627 (706)
..++..+++ .||+|++++|++||+++++|++++|++++||+|
T Consensus 59 -------------------------------------~~~~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g~~i~YD~L 101 (430)
T 3hyw_A 59 -------------------------------------SVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYL 101 (430)
T ss_dssp -------------------------------------EEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEE
T ss_pred -------------------------------------hhcHHHHHHHCCcEEEEeEEEEEECCCCEEEECCCCEEECCEE
Confidence 233334443 489999999999999999999999999999999
Q ss_pred EEecCcccCccCCCCchh
Q psy8791 628 IVASGIQMYYDRVKGGTT 645 (706)
Q Consensus 628 ViAtGs~~~~p~i~G~~~ 645 (706)
|||||+++. +++||+++
T Consensus 102 ViAtG~~~~-~~i~G~~e 118 (430)
T 3hyw_A 102 VIATGPKLV-FGAEGQEE 118 (430)
T ss_dssp EECCCCEEE-CCSBTHHH
T ss_pred EEeCCCCcc-CCccCccc
Confidence 999999874 57999864
No 96
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.70 E-value=1.6e-17 Score=177.52 Aligned_cols=156 Identities=18% Similarity=0.204 Sum_probs=109.4
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCC-cceEEeeccccccccccccccccCCCCccccccccc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQ-PMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIV 543 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~-~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~ 543 (706)
.+..+|||||||+||++||..|+. ++.+|+|||++++..|. +.++.
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~--~~~~itlie~~~~~~y~~~~l~~------------------------------- 53 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALG--KCDDITMINSEKYLPYYRPRLNE------------------------------- 53 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTT--TCSCEEEECSSSSCCBCGGGHHH-------------------------------
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhC--CCCEEEEEECCCCCCcccChhhH-------------------------------
Confidence 345689999999999999999943 47999999998876542 22211
Q ss_pred ccCCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhc-cCCcEEEe-ceEEEEEcCCCeEEcCCCcE
Q psy8791 544 SFDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PSGATWVK-DKIVSFDPENNRVRTQAGSE 621 (706)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~~~~-~~v~~id~~~~~V~~~~g~~ 621 (706)
+..+....+++.....+++ +.+++++. .+|++||+++++|++++|++
T Consensus 54 -------------------------------~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~ 102 (385)
T 3klj_A 54 -------------------------------IIAKNKSIDDILIKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEK 102 (385)
T ss_dssp -------------------------------HHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEEEETTTTEEEETTSCE
T ss_pred -------------------------------HHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEEEECCCCEEEECCCCE
Confidence 1111112223333333333 36899965 48999999999999999999
Q ss_pred EeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 622 ISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 622 i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+.||+||||||++|+.|++||.+ .+..++...+..........+++++|| |+|+|..|++...
T Consensus 103 ~~yd~lvlAtG~~p~~p~i~G~~----~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~ 170 (385)
T 3klj_A 103 IKYEKLIIASGSIANKIKVPHAD----EIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGT 170 (385)
T ss_dssp EECSEEEECCCEEECCCCCTTCS----CEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTC
T ss_pred EECCEEEEecCCCcCCCCCCCCC----CeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCC
Confidence 99999999999999999999976 233333322222222222347899999 8999999988754
No 97
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.69 E-value=5.9e-17 Score=174.88 Aligned_cols=118 Identities=29% Similarity=0.489 Sum_probs=98.3
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDS 547 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 547 (706)
++|||||||+||+++|.+|++..++.+|+|||+++++.|.|+++.+.+|.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~------------------------------ 52 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGD------------------------------ 52 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTS------------------------------
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCC------------------------------
Confidence 57999999999999999999987778999999988776666554444433
Q ss_pred CceEEEeeecceecCCCcccccCcccccccccccccccccchhhhccCCcEEEeceEEEEEcCCCeEEcCCCcEEeeCEE
Q psy8791 548 SYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDPENNRVRTQAGSEISYEYM 627 (706)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~yd~l 627 (706)
...+++..+++.+.+.|++|++++|++||+++++|++.+|+++.||+|
T Consensus 53 --------------------------------~~~~~~~~~~~~~~~~gv~~i~~~v~~id~~~~~v~~~~g~~i~yd~L 100 (401)
T 3vrd_B 53 --------------------------------RELASLRVGYDGLRAHGIQVVHDSALGIDPDKKLVKTAGGAEFAYDRC 100 (401)
T ss_dssp --------------------------------SCGGGGEECSHHHHHTTCEEECSCEEEEETTTTEEEETTSCEEECSEE
T ss_pred --------------------------------CCHHHHhhCHHHHHHCCCEEEEeEEEEEEccCcEEEecccceeeccee
Confidence 333444455556666799999999999999999999999999999999
Q ss_pred EEecCcccCccCCCCchhhh
Q psy8791 628 IVASGIQMYYDRVKGGTTSL 647 (706)
Q Consensus 628 ViAtGs~~~~p~i~G~~~~~ 647 (706)
|||||+++.++++||+++..
T Consensus 101 viAtG~~~~~~~i~G~~e~~ 120 (401)
T 3vrd_B 101 VVAPGIDLLYDKIEGYSEAL 120 (401)
T ss_dssp EECCCEEECGGGSBTCCSGG
T ss_pred eeccCCccccCCccCchhhc
Confidence 99999999999999987544
No 98
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.65 E-value=2.3e-16 Score=170.43 Aligned_cols=159 Identities=14% Similarity=0.172 Sum_probs=109.0
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDS 547 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 547 (706)
++|||||||+||+++|..|+++..+.+|+|||+++++.|... |+
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~----------------~l-------------------- 46 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRP----------------SL-------------------- 46 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSG----------------GG--------------------
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCc----------------cc--------------------
Confidence 489999999999999999999855567999999887665321 00
Q ss_pred CceEEEeeecceecCCCcccccCcccccccccccccccccchhhhccCCcEEEec-eEEEEEcCCCeEEcCCCcEEeeCE
Q psy8791 548 SYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKD-KIVSFDPENNRVRTQAGSEISYEY 626 (706)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~id~~~~~V~~~~g~~i~yd~ 626 (706)
+..+..+....+++......+.+.+++++.+ +|+.+|++.++|.+.+|+++.||+
T Consensus 47 ------------------------~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~ 102 (410)
T 3ef6_A 47 ------------------------SKAVLDGSLERPPILAEADWYGEARIDMLTGPEVTALDVQTRTISLDDGTTLSADA 102 (410)
T ss_dssp ------------------------GTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEEEEETTTTEEEETTSCEEECSE
T ss_pred ------------------------cHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCE
Confidence 0001111111111211111222368999777 999999999999999999999999
Q ss_pred EEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 627 MIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 627 lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
||||||++|+.|++||.+ ...+..++...+..........+++++|| |+|+|..+.++..
T Consensus 103 lvlAtG~~p~~~~ipG~~--~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~ 167 (410)
T 3ef6_A 103 IVIATGSRARTMALPGSQ--LPGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGL 167 (410)
T ss_dssp EEECCCEEECCCCCTTTT--STTEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEEccCCcccCCCCCCcc--ccceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCC
Confidence 999999999999999976 33333333332222222223357889999 8999999877643
No 99
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.65 E-value=9.4e-17 Score=175.13 Aligned_cols=162 Identities=16% Similarity=0.310 Sum_probs=112.4
Q ss_pred ccccccccCcchhHHHHHHHHHhh-cCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSR-LGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~-~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
.|++|||||||+||+++|..|++. .++.+|+|||+++++.|.|+++.+..|.
T Consensus 3 ~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~--------------------------- 55 (437)
T 3sx6_A 3 GSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGW--------------------------- 55 (437)
T ss_dssp TSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTS---------------------------
T ss_pred CCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCc---------------------------
Confidence 478999999999999999999982 2378999999988776666543332222
Q ss_pred cCCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCcEEe
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGSEIS 623 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~~i~ 623 (706)
...+++...+..+++ .|++++.++|++||+++++|++++|+++.
T Consensus 56 -----------------------------------~~~~~~~~~l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~ 100 (437)
T 3sx6_A 56 -----------------------------------KERDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADGNTVH 100 (437)
T ss_dssp -----------------------------------SCHHHHEEECHHHHHTTTCEEECSCEEEEETTTTEEEETTSCEEE
T ss_pred -----------------------------------cCHHHHHHHHHHHHHHCCCEEEEeEEEEEEcCCCEEEECCCCEEE
Confidence 222233344444443 68999999999999999999999998999
Q ss_pred eCEEEEecCcccCccCCCCchhhhcccccccccccCccchh-hh--ccCccEEEE-c----------HHHHHHHHHHHhh
Q psy8791 624 YEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVT-WE--QKHKQYQLV-S----------PEIRAKAYDLTKR 689 (706)
Q Consensus 624 yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~-~~--~~~k~vvVi-G----------~E~A~~l~~~~~~ 689 (706)
||+||||||++|+.|++||+++..+....+....+...... +. ...++++|| | +|+|..+++.+++
T Consensus 101 ~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~ 180 (437)
T 3sx6_A 101 YDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKK 180 (437)
T ss_dssp CSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHH
Confidence 99999999999999999998743122222222222111111 11 113455666 2 9999888777654
No 100
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.63 E-value=5.5e-16 Score=167.94 Aligned_cols=160 Identities=18% Similarity=0.158 Sum_probs=109.6
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
.+++|||||||+||+++|..|+++..+.+|+|||+++.+.|... |+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~----------------~l------------------ 53 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERP----------------PL------------------ 53 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSG----------------GG------------------
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcc----------------cC------------------
Confidence 46799999999999999999999855566999999887654321 00
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhh-ccCCcEEEec-eEEEEEcCCCeEEcCCCcEEe
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSV-LPSGATWVKD-KIVSFDPENNRVRTQAGSEIS 623 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gv~~~~~-~v~~id~~~~~V~~~~g~~i~ 623 (706)
+..+..+....+++......+ .+.+++++.+ +|+.+|++.++|.+.+|+++.
T Consensus 54 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~ 107 (415)
T 3lxd_A 54 --------------------------SKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEVVSLDPAAHTVKLGDGSAIE 107 (415)
T ss_dssp --------------------------GTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCCEEEEETTTTEEEETTSCEEE
T ss_pred --------------------------CHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCEEEEEECCCCEEEECCCCEEE
Confidence 000111111112222222222 2368999776 899999999999999999999
Q ss_pred eCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhcc-CccEEEE-----cHHHHHHHHHHH
Q psy8791 624 YEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQK-HKQYQLV-----SPEIRAKAYDLT 687 (706)
Q Consensus 624 yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~k~vvVi-----G~E~A~~l~~~~ 687 (706)
||+||||||++|+.|++||.+ ...+..++...+.......... +++++|| |+|+|..+.++.
T Consensus 108 ~d~lvlAtG~~~~~~~i~g~~--~~~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g 175 (415)
T 3lxd_A 108 YGKLIWATGGDPRRLSCVGAD--LAGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFG 175 (415)
T ss_dssp EEEEEECCCEECCCCBTTSSC--CBTEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTT
T ss_pred eeEEEEccCCccCCCCCCCcc--ccCEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcC
Confidence 999999999999999999976 3333333322222222222233 7899999 899998887764
No 101
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.62 E-value=1.2e-15 Score=164.67 Aligned_cols=159 Identities=17% Similarity=0.191 Sum_probs=109.3
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDS 547 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 547 (706)
++|||||||+||+++|..|++...+.+|+|||++++..|... |+
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~----------------~l-------------------- 45 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRP----------------PL-------------------- 45 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSG----------------GG--------------------
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCc----------------cC--------------------
Confidence 479999999999999999999855559999999886654321 00
Q ss_pred CceEEEeeecceecCCCcccccCcccccccccccccccccchhh-hccCCcEEEeceEEEEEcCCCeEEcCCCcEEeeCE
Q psy8791 548 SYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKS-VLPSGATWVKDKIVSFDPENNRVRTQAGSEISYEY 626 (706)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~yd~ 626 (706)
+..+..+....+++...... +.+.+++++.++|+.+|++.++|.+.+|+++.||+
T Consensus 46 ------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~v~~id~~~~~v~~~~g~~~~~d~ 101 (404)
T 3fg2_P 46 ------------------------SKAYLKSGGDPNSLMFRPEKFFQDQAIELISDRMVSIDREGRKLLLASGTAIEYGH 101 (404)
T ss_dssp ------------------------GTGGGGSCCCTTSSBSSCHHHHHHTTEEEECCCEEEEETTTTEEEESSSCEEECSE
T ss_pred ------------------------CHHHHCCCCCHHHccCCCHHHHHhCCCEEEEEEEEEEECCCCEEEECCCCEEECCE
Confidence 00001111111222222222 22368999779999999999999999999999999
Q ss_pred EEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 627 MIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 627 lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
||+|||++|+.|++||.+ ...+..++...+..........+++++|| |+|+|..+.++..
T Consensus 102 lvlAtG~~p~~~~i~g~~--~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~ 166 (404)
T 3fg2_P 102 LVLATGARNRMLDVPNAS--LPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGL 166 (404)
T ss_dssp EEECCCEEECCCCSTTTT--STTEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEEeeCCCccCCCCCCCC--CCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCC
Confidence 999999999999999975 33333333332222222333457889999 8999988876643
No 102
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.59 E-value=1.1e-15 Score=162.30 Aligned_cols=150 Identities=15% Similarity=0.207 Sum_probs=99.5
Q ss_pred cccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCC-cceEEeeccccccccccccccccCCCCcccccccccccCC
Q psy8791 469 HLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQ-PMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDS 547 (706)
Q Consensus 469 ~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~-~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 547 (706)
|++|||||+||+++|..|++. + +|+|||+++...|. ++++....
T Consensus 10 ~vvIIGgG~AGl~aA~~l~~~--g-~V~lie~~~~~~~~~~~l~~~~~-------------------------------- 54 (367)
T 1xhc_A 10 KVVIVGNGPGGFELAKQLSQT--Y-EVTVIDKEPVPYYSKPMLSHYIA-------------------------------- 54 (367)
T ss_dssp EEEEECCSHHHHHHHHHHTTT--S-EEEEECSSSSCCCCSTTHHHHHT--------------------------------
T ss_pred cEEEECCcHHHHHHHHHHhhc--C-CEEEEECCCCCccccchhHHHHh--------------------------------
Confidence 899999999999999999887 5 99999998765432 11110000
Q ss_pred CceEEEeeecceecCCCcccccCcccccccccccccccccchhhhc-cCCcEEEec-eEEEEEcCCCeEEcCCCcEEeeC
Q psy8791 548 SYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PSGATWVKD-KIVSFDPENNRVRTQAGSEISYE 625 (706)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~~~~~-~v~~id~~~~~V~~~~g~~i~yd 625 (706)
+....+++.....+++ +.|++++.+ +|+++|+++++|. .+|+++.||
T Consensus 55 ------------------------------g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~id~~~~~V~-~~g~~~~~d 103 (367)
T 1xhc_A 55 ------------------------------GFIPRNRLFPYSLDWYRKRGIEIRLAEEAKLIDRGRKVVI-TEKGEVPYD 103 (367)
T ss_dssp ------------------------------TSSCGGGGCSSCHHHHHHHTEEEECSCCEEEEETTTTEEE-ESSCEEECS
T ss_pred ------------------------------CCCCHHHhccCCHHHHHhCCcEEEECCEEEEEECCCCEEE-ECCcEEECC
Confidence 0011111112222222 258999877 6999999998888 778899999
Q ss_pred EEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 626 YMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 626 ~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+||||||++|+.|++||.+ .+..++...+..........+++++|| |+|+|..|+++..
T Consensus 104 ~lViATGs~p~~p~i~G~~----~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~ 167 (367)
T 1xhc_A 104 TLVLATGARAREPQIKGKE----YLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGY 167 (367)
T ss_dssp EEEECCCEEECCCCSBTGG----GEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCCCCCCCCcC----CEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCC
Confidence 9999999999999999932 222122211111111111235889999 8999999887653
No 103
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.59 E-value=1.3e-15 Score=166.73 Aligned_cols=160 Identities=18% Similarity=0.259 Sum_probs=104.0
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcc-eEEeeccccccccccccccccCCCCccccccccc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPM-FTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIV 543 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~-~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~ 543 (706)
|+++||||||||+||+++|..|++..++.+|+|||+++...|.+. ++....+
T Consensus 1 M~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~--------------------------- 53 (449)
T 3kd9_A 1 MSLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEG--------------------------- 53 (449)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC---------------------------------------
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCC---------------------------
Confidence 346799999999999999999999877889999999887654432 1111110
Q ss_pred ccCCCceEEEeeecceecCCCcccccCccccccccccccccccc-chhhhc-cCCcEEEec-eEEEEEcCCCeEEcCCC-
Q psy8791 544 SFDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRR-PMKSVL-PSGATWVKD-KIVSFDPENNRVRTQAG- 619 (706)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~gv~~~~~-~v~~id~~~~~V~~~~g- 619 (706)
....+++.. ....+. ..+++++.+ +|+++|++.+.|.+.++
T Consensus 54 -----------------------------------~~~~~~~~~~~~~~~~~~~gi~v~~~~~v~~i~~~~~~v~~~~g~ 98 (449)
T 3kd9_A 54 -----------------------------------LSTPDKLMYYPPEVFIKKRGIDLHLNAEVIEVDTGYVRVRENGGE 98 (449)
T ss_dssp -----------------------------------------------CTHHHHTTCEEETTCEEEEECSSEEEEECSSSE
T ss_pred -----------------------------------CCCHHHhhhcCHHHHHHhcCcEEEecCEEEEEecCCCEEEECCce
Confidence 000111111 112221 258899776 89999998888888777
Q ss_pred cEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhc--cCccEEEE-----cHHHHHHHHHHHh
Q psy8791 620 SEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQ--KHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 620 ~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
.++.||+||||||++|..|++||.+ ...+...+...+......... .+++++|| |+|+|..++++..
T Consensus 99 ~~~~~d~lviAtG~~p~~p~i~G~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~ 172 (449)
T 3kd9_A 99 KSYEWDYLVFANGASPQVPAIEGVN--LKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGK 172 (449)
T ss_dssp EEEECSEEEECCCEEECCCSCBTTT--STTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEEEcCEEEECCCCCCCCCCCCCCC--CCCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCC
Confidence 4899999999999999999999976 222222222222222222222 56789999 8999998887654
No 104
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.58 E-value=2.5e-15 Score=164.54 Aligned_cols=158 Identities=16% Similarity=0.238 Sum_probs=106.6
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcce-EEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMF-TLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~-~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
+||||||||+||+++|.+|+++.++.+|+|||+++...|.+.. +...++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~----------------------------- 53 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHT----------------------------- 53 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC--------------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCC-----------------------------
Confidence 5899999999999999999998778999999998876654421 1111100
Q ss_pred CCceEEEeeecceecCCCcccccCccccccccccccccccc-chhhhccCCcEE-EeceEEEEEcCCCeEEc---CCCcE
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRR-PMKSVLPSGATW-VKDKIVSFDPENNRVRT---QAGSE 621 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gv~~-~~~~v~~id~~~~~V~~---~~g~~ 621 (706)
....+++.. ....+.+.++++ ++.+|+.+|++.+.|.+ .++++
T Consensus 54 --------------------------------~~~~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~ 101 (452)
T 3oc4_A 54 --------------------------------INELHEARYITEEELRRQKIQLLLNREVVAMDVENQLIAWTRKEEQQW 101 (452)
T ss_dssp ---------------------------------------CCCCHHHHHHTTEEEECSCEEEEEETTTTEEEEEETTEEEE
T ss_pred --------------------------------CCCHHHhhcCCHHHHHHCCCEEEECCEEEEEECCCCEEEEEecCceEE
Confidence 000111111 112222358888 56799999999998866 35678
Q ss_pred EeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 622 ISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 622 i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+.||+||||||++|..|++||.+. ..+...+...+..........+++++|| |+|+|..++++..
T Consensus 102 ~~~d~lviAtG~~p~~p~i~g~~~--~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~ 171 (452)
T 3oc4_A 102 YSYDKLILATGASQFSTQIRGSQT--EKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKK 171 (452)
T ss_dssp EECSEEEECCCCCBCCCCCBTTTC--TTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEcCEEEECCCcccCCCCCCCCCC--CCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCC
Confidence 999999999999999999999762 2333333333333334445578999999 8999998887654
No 105
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.58 E-value=3.3e-15 Score=155.31 Aligned_cols=155 Identities=18% Similarity=0.151 Sum_probs=97.5
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeecccccccccc--ccccccCCCCccccccccccc
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSR--RPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~ 545 (706)
|||+|||||+||++||.+|+++ +.+|+|||++.. ||.|....+. .|.+.
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~~--g~~V~liE~~~~-----------gG~~~~~~~i~~~p~~~---------------- 57 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASRA--NLKTVMIERGIP-----------GGQMANTEEVENFPGFE---------------- 57 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCT-----------TGGGGGCSCBCCSTTCS----------------
T ss_pred CCEEEECCCHHHHHHHHHHHHC--CCCEEEEecCCC-----------CCeeecccccCCcCCcc----------------
Confidence 8999999999999999999998 899999997431 3333211110 01000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccc-hhhhccCCcEE-EeceEEEEEcCCCeEEcCCCcEEe
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRP-MKSVLPSGATW-VKDKIVSFDPENNRVRTQAGSEIS 623 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~gv~~-~~~~v~~id~~~~~V~~~~g~~i~ 623 (706)
. ....++... .....+.+..+ ....+...+.....+...+++++.
T Consensus 58 ----------------------------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (312)
T 4gcm_A 58 ----------------------------M-----ITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELT 104 (312)
T ss_dssp ----------------------------S-----BCHHHHHHHHHHHHHHTTCEEEECCCCEEEECSSCEEEECSSCEEE
T ss_pred ----------------------------c-----cchHHHHHHHHHHHhhccccccceeeeeeeeeecceeeccCCeEEE
Confidence 0 000111111 11122234445 334455566666667777888999
Q ss_pred eCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 624 YEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 624 yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
||+||||||++|+.|++||.++.... ..............+|+|+|| |+|+|..|++++.+
T Consensus 105 ~d~liiAtGs~~~~~~ipG~~~~~~~-----~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~ 170 (312)
T 4gcm_A 105 AKAVIIATGAEYKKIGVPGEQELGGR-----GVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADK 170 (312)
T ss_dssp EEEEEECCCEEECCCCCTTTTTTBTT-----TEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSE
T ss_pred eceeEEcccCccCcCCCCChhhhCCc-----cEEeeeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCE
Confidence 99999999999999999998743221 111111122233467899999 89999998876643
No 106
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.57 E-value=5.3e-15 Score=159.60 Aligned_cols=156 Identities=19% Similarity=0.232 Sum_probs=103.6
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
++||+|||||+||+++|..|++...+.+|+|||+++...|... ++.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~----------------~~~------------------ 52 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRP----------------PLS------------------ 52 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSG----------------GGG------------------
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCC----------------CCC------------------
Confidence 4799999999999999999999855557999999776543210 000
Q ss_pred CCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhccCCcEEEec-eEEEEEcCCCeEEcCCCcEEeeC
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKD-KIVSFDPENNRVRTQAGSEISYE 625 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~id~~~~~V~~~~g~~i~yd 625 (706)
..+..+.. .+++... .+.+.+++++.+ +|+++|++.++|++.+|+++.||
T Consensus 53 --------------------------~~~~~~~~-~~~~~~~--~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~~~~d 103 (408)
T 2gqw_A 53 --------------------------KDFMAHGD-AEKIRLD--CKRAPEVEWLLGVTAQSFDPQAHTVALSDGRTLPYG 103 (408)
T ss_dssp --------------------------THHHHHCC-GGGSBCC--CTTSCSCEEEETCCEEEEETTTTEEEETTSCEEECS
T ss_pred --------------------------HHHhCCCc-hhhhhHH--HHHHCCCEEEcCCEEEEEECCCCEEEECCCCEEECC
Confidence 00000000 0000011 222358999777 49999999999999999999999
Q ss_pred EEEEecCcccCccCC-CCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 626 YMIVASGIQMYYDRV-KGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 626 ~lViAtGs~~~~p~i-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+||||||++|..|++ ||.+ ..+..++...+..........+++++|| |+|+|..|+++..
T Consensus 104 ~lviAtG~~~~~~~i~~G~~---~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~ 169 (408)
T 2gqw_A 104 TLVLATGAAPRALPTLQGAT---MPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGV 169 (408)
T ss_dssp EEEECCCEEECCCGGGTTCS---SCEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCCCCCccCCCC---CcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCC
Confidence 999999999999999 9975 2222222211111111112247899999 8999999887654
No 107
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.56 E-value=4.6e-15 Score=161.23 Aligned_cols=159 Identities=14% Similarity=0.157 Sum_probs=104.9
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeecccccccccccccc-ccCCCCccccccccccc
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMK-SVLPSGATWVKDKIVSF 545 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~ 545 (706)
.+||||||||+||+++|..|++...+.+|+|||+++...|.. .++. .++..
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~----------------~~l~~~~~~~------------ 55 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHL----------------PPLSKAYLAG------------ 55 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCS----------------GGGGTTTTTT------------
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcC----------------CCCcHHHhCC------------
Confidence 469999999999999999999984445899999877544321 0110 00000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhh-hccCCcEEEec-eEEEEEcCCCeEEcCCCcEEe
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKS-VLPSGATWVKD-KIVSFDPENNRVRTQAGSEIS 623 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~gv~~~~~-~v~~id~~~~~V~~~~g~~i~ 623 (706)
....+++.....+ +.+.|++++.+ +|+++|++.++|.+.+|+++.
T Consensus 56 ---------------------------------~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~g~~~~ 102 (431)
T 1q1r_A 56 ---------------------------------KATAESLYLRTPDAYAAQNIQLLGGTQVTAINRDRQQVILSDGRALD 102 (431)
T ss_dssp ---------------------------------CSCSGGGBSSCHHHHHHTTEEEECSCCEEEEETTTTEEEETTSCEEE
T ss_pred ---------------------------------CCChHHhcccCHHHHHhCCCEEEeCCEEEEEECCCCEEEECCCCEEE
Confidence 0001111111112 22368998764 789999998999999998999
Q ss_pred eCEEEEecCcccCccCCCCchhhhcc---cccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 624 YEYMIVASGIQMYYDRVKGGTTSLED---RGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 624 yd~lViAtGs~~~~p~i~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
||+||+|||++|..|++||.+ ... +..++...+..........+++++|| |+|+|..|.++..
T Consensus 103 ~d~lviAtG~~p~~~~i~G~~--~~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~ 173 (431)
T 1q1r_A 103 YDRLVLATGGRPRPLPVASGA--VGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANM 173 (431)
T ss_dssp CSEEEECCCEEECCCGGGTTH--HHHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred CCEEEEcCCCCccCCCCCCcc--cCCCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCC
Confidence 999999999999999999976 222 22222221211122222357899999 8999999887654
No 108
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.56 E-value=3.8e-15 Score=154.87 Aligned_cols=168 Identities=15% Similarity=0.172 Sum_probs=103.9
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
..||||+|||||+||++||.+++++ +.+|+|||++.. +|.|.. .+.|.++++..
T Consensus 2 ~~~yDvvIIG~GpAGl~AA~~la~~--g~~v~liE~~~~-----------gg~~~~--G~~~~~~~i~~----------- 55 (314)
T 4a5l_A 2 SNIHDVVIIGSGPAAHTAAIYLGRS--SLKPVMYEGFMA-----------GGVAAG--GQLTTTTIIEN----------- 55 (314)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHT--TCCCEEECCSSG-----------GGCCTT--CGGGGSSEECC-----------
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHC--CCCEEEEecCCC-----------CCcccC--CCcCChHHhhh-----------
Confidence 4589999999999999999999998 889999998543 122211 11222221110
Q ss_pred cCCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhc-cCCcEEEeceEEEEEcCCC--eEEcCCCcE
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PSGATWVKDKIVSFDPENN--RVRTQAGSE 621 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~~~~~~v~~id~~~~--~V~~~~g~~ 621 (706)
.+.++. + ....++........ ..++++...++..+..... .+.+.++.+
T Consensus 56 ------------------------~~g~~~---~-i~~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 107 (314)
T 4a5l_A 56 ------------------------FPGFPN---G-IDGNELMMNMRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKE 107 (314)
T ss_dssp ------------------------STTCTT---C-EEHHHHHHHHHHHHHHTTCEEECCCEEEEECSSSSEEEEETTCCE
T ss_pred ------------------------ccCCcc---c-CCHHHHHHHHHHHHhhcCcEEEEeEEEEeecCCCceEEEECCCeE
Confidence 000000 0 01112222222222 2577888888887776554 456778889
Q ss_pred EeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 622 ISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 622 i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
+.||+||||||++|+.|++||.+...... +..... .........+++++|| |+|+|..|++++.+
T Consensus 108 ~~~~~liiATG~~~~~~~ipG~~~~~~~~--~~~~~~-~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~ 177 (314)
T 4a5l_A 108 VLTKSVIIATGATAKRMHVPGEDKYWQNG--VSACAI-CDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSK 177 (314)
T ss_dssp EEEEEEEECCCEEECCCCCTTHHHHBTTT--EESCHH-HHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSE
T ss_pred EEEeEEEEcccccccccCCCccccccccc--eeeehh-hhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCe
Confidence 99999999999999999999987432211 111101 0111122356889999 99999998877654
No 109
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.54 E-value=2.8e-14 Score=147.64 Aligned_cols=146 Identities=12% Similarity=0.196 Sum_probs=88.7
Q ss_pred cccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccc
Q psy8791 463 VFRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKI 542 (706)
Q Consensus 463 ~~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~ 542 (706)
.+|+.|||+|||||+||++||.++++. +.+|+|||++.. ||....+....+
T Consensus 2 n~M~~yDVvIIGaGpAGlsAA~~lar~--g~~v~lie~~~~-----------gg~~~~~~~~~~---------------- 52 (304)
T 4fk1_A 2 NAMKYIDCAVIGAGPAGLNASLVLGRA--RKQIALFDNNTN-----------RNRVTQNSHGFI---------------- 52 (304)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSCC-----------GGGGSSCBCCST----------------
T ss_pred CCCCCcCEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCCC-----------CCeeeeecCCcc----------------
Confidence 467889999999999999999999987 789999998542 121110000000
Q ss_pred cccCCCceEEEeeecceecCCCcccccCccccccccccccccccc-chhhhcc-CCcEEEeceEEEEEcCC---CeEEcC
Q psy8791 543 VSFDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRR-PMKSVLP-SGATWVKDKIVSFDPEN---NRVRTQ 617 (706)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~gv~~~~~~v~~id~~~---~~V~~~ 617 (706)
. .+ + ....++.. ...+..+ .++.++..++..++... .+|.+.
T Consensus 53 ------------------~----------~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 99 (304)
T 4fk1_A 53 ------------------T----------RD----G-IKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTK 99 (304)
T ss_dssp ------------------T----------CT----T-BCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEEET
T ss_pred ------------------C----------CC----C-CCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEEC
Confidence 0 00 0 00011111 1222233 35677888887776543 367888
Q ss_pred CCcEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE
Q psy8791 618 AGSEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV 675 (706)
Q Consensus 618 ~g~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi 675 (706)
+|+++.||+||||||++|+.|++||.++.... ..............+++++||
T Consensus 100 ~g~~~~a~~liiATGs~p~~p~i~G~~~~~~~-----~v~~~~~~~~~~~~~~~~~VI 152 (304)
T 4fk1_A 100 DHTKYLAERVLLATGMQEEFPSIPNVREYYGK-----SLFSCPYCDGWELKDQPLIII 152 (304)
T ss_dssp TCCEEEEEEEEECCCCEEECCSCTTHHHHBTT-----TEESCHHHHSGGGTTSCEEEE
T ss_pred CCCEEEeCEEEEccCCccccccccCccccccc-----eeeeccccchhHhcCCceeee
Confidence 99999999999999999999999998753321 222222222333456777777
No 110
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.53 E-value=1.3e-14 Score=160.46 Aligned_cols=189 Identities=19% Similarity=0.226 Sum_probs=109.2
Q ss_pred ccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccc
Q psy8791 464 FRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIV 543 (706)
Q Consensus 464 ~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~ 543 (706)
++.+++|||||||+||+++|..|++..++.+|+|||+++++.|... .+.|.++...........
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~---------------~lsk~l~~~~~~~~~~~~- 71 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRP---------------PLSKELWFSDDPNVTKTL- 71 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSG---------------GGGTGGGCC--CTHHHHC-
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCC---------------CCCHHhhcCCccchhhcc-
Confidence 3456899999999999999999998877899999999877654221 112222221100000000
Q ss_pred ccCCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhccCCcEEEec-eEEEEEcCCCeEEcCCCcEE
Q psy8791 544 SFDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKD-KIVSFDPENNRVRTQAGSEI 622 (706)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~id~~~~~V~~~~g~~i 622 (706)
.+ ..+. .......+.+. .++. .. ..+....+.|++++.+ +|+.||++.++|.+.+|+++
T Consensus 72 ~~-~~~~----------~~~~~~~~~~~-~~~~----~~----~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i 131 (493)
T 1m6i_A 72 RF-KQWN----------GKERSIYFQPP-SFYV----SA----QDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQI 131 (493)
T ss_dssp EE-ECTT----------SCEEESBSSCG-GGSB----CT----TTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEE
T ss_pred cc-cccc----------cccccccccch-Hhhc----ch----hhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEE
Confidence 00 0000 00000000000 0000 00 0111112358999776 89999999999999999999
Q ss_pred eeCEEEEecCcccCccCCCCch--hhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 623 SYEYMIVASGIQMYYDRVKGGT--TSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 623 ~yd~lViAtGs~~~~p~i~G~~--~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
.||+||||||++|+.|+++|.. ...+.+..++...+..........+++|+|| |+|+|..|++.++
T Consensus 132 ~yd~lviATGs~p~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~ 204 (493)
T 1m6i_A 132 TYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKAR 204 (493)
T ss_dssp EEEEEEECCCEEECCCHHHHTSCHHHHHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHH
T ss_pred ECCEEEECCCCCCCCCCCcccccccccCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhh
Confidence 9999999999999877765531 1122222222222211122223357899999 9999999988654
No 111
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.53 E-value=1.8e-15 Score=167.59 Aligned_cols=196 Identities=13% Similarity=0.087 Sum_probs=121.2
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDS 547 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 547 (706)
||+||||+|+||+.+|.++++. +.+|+|||++....+.. ....||.| ++..|+|.|.|+.++..+......+...
T Consensus 43 YDviVIG~GpaG~~aA~~aa~~--G~kValIE~~~~~~~~~--k~~lGGtC-ln~GCIPsK~L~~aa~~~~~~~~~~~~~ 117 (542)
T 4b1b_A 43 YDYVVIGGGPGGMASAKEAAAH--GARVLLFDYVKPSSQGT--KWGIGGTC-VNVGCVPKKLMHYAGHMGSIFKLDSKAY 117 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT--TCCEEEECCCCCCTTCC--CCCSSHHH-HHHSHHHHHHHHHHHHHHHHHHHTGGGG
T ss_pred CCEEEECCCHHHHHHHHHHHHC--CCeEEEEeccccccccc--cCCCCCcc-cccchHHHHHHHHHHHHHHHHHhhhHhc
Confidence 8999999999999999999998 89999999754321100 01124444 4566678888777654332221111111
Q ss_pred CceEEEeeecceecCCCcccccCccccccccc-ccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcC----CCcE
Q psy8791 548 SYTFTILILHSIVEPTDDHYYQPMFTLIGGGM-KKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQ----AGSE 621 (706)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~----~g~~ 621 (706)
++.+. ... ..|..+.... ...+.+...+...++ .+|+++.+.+.++++....|... ++++
T Consensus 118 Gi~~~--------~~~------~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~ 183 (542)
T 4b1b_A 118 GWKFD--------NLK------HDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEET 183 (542)
T ss_dssp TEEEE--------EEE------ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEE
T ss_pred CcccC--------ccc------ccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEE
Confidence 11111 000 0000000000 011122223333333 69999999999999875555433 3467
Q ss_pred EeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhhh
Q psy8791 622 ISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKRK 690 (706)
Q Consensus 622 i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~~ 690 (706)
+.+|++||||||+|..|+.++.+.. ...++...+.+...|++++|| |+|+|..++++..++
T Consensus 184 i~a~~iiIATGs~P~~P~~~~~~~~--------~~~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~V 249 (542)
T 4b1b_A 184 VTGKYILIATGCRPHIPDDVEGAKE--------LSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDV 249 (542)
T ss_dssp EEEEEEEECCCEEECCCSSSBTHHH--------HCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHHTCCE
T ss_pred EeeeeEEeccCCCCCCCCcccCCCc--------cccCchhhhccccCCceEEEECCCHHHHHHHHHHHhcCCeE
Confidence 9999999999999998865554321 123444455666789999999 999999999998764
No 112
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.52 E-value=1.5e-14 Score=159.31 Aligned_cols=165 Identities=15% Similarity=0.165 Sum_probs=95.1
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcc-eEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPM-FTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~-~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
++++|+|||||+||+++|..|+++.++.+|+|||+++.+.|.+. ++...+|.........
T Consensus 2 ~~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~------------------- 62 (472)
T 3iwa_A 2 SLKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQ------------------- 62 (472)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC--------------------------------------------
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhc-------------------
Confidence 35699999999999999999999877899999999988766542 2222222110000000
Q ss_pred cCCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEE-EeceEEEEEcCCCeEEcCC---C
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATW-VKDKIVSFDPENNRVRTQA---G 619 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~-~~~~v~~id~~~~~V~~~~---g 619 (706)
+ ...++......+.+ .++++ ++.+|+.+|++.+.+.+.+ |
T Consensus 63 -----------------~------------------~~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g 107 (472)
T 3iwa_A 63 -----------------A------------------TPYNVVRDPEFFRINKDVEALVETRAHAIDRAAHTVEIENLRTG 107 (472)
T ss_dssp -----------------------------------------------------CEEECSEEEEEEETTTTEEEEEETTTC
T ss_pred -----------------c------------------ccchhccCHHHHhhhcCcEEEECCEEEEEECCCCEEEEeecCCC
Confidence 0 00001111222222 47887 5689999999999887654 6
Q ss_pred c--EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhh--ccCccEEEE-----cHHHHHHHHHH
Q psy8791 620 S--EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWE--QKHKQYQLV-----SPEIRAKAYDL 686 (706)
Q Consensus 620 ~--~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~k~vvVi-----G~E~A~~l~~~ 686 (706)
+ ++.||+||||||++|..|++||.+ ...+..++...+........ ..+++++|| |+|+|..+.++
T Consensus 108 ~~~~~~~d~lviAtG~~p~~p~i~G~~--~~~v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~ 181 (472)
T 3iwa_A 108 ERRTLKYDKLVLALGSKANRPPVEGMD--LAGVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADM 181 (472)
T ss_dssp CEEEEECSEEEECCCEEECCCSCTTTT--SBTEEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECCEEEEeCCCCcCCCCCCCCC--CCCEEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHh
Confidence 5 799999999999999999999986 23222222211111111111 347899999 89999988877
No 113
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.52 E-value=9.7e-15 Score=158.80 Aligned_cols=156 Identities=16% Similarity=0.165 Sum_probs=102.1
Q ss_pred cccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCc-ceEEeeccccccccccccccccCCCCcccccccccccCC
Q psy8791 469 HLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQP-MFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDS 547 (706)
Q Consensus 469 ~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~-~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 547 (706)
||||||||+||++||.+|++..++.+|+|||+++++.|.. +++...++...
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~---------------------------- 53 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVE---------------------------- 53 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSC----------------------------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCcc----------------------------
Confidence 7999999999999999999987778999999988766532 11111111000
Q ss_pred CceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEE-eceEEEEEcCCCeEEcCC-----Cc
Q psy8791 548 SYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWV-KDKIVSFDPENNRVRTQA-----GS 620 (706)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~-~~~v~~id~~~~~V~~~~-----g~ 620 (706)
+. ...+......+++ .++++. ..+|+.||++.+.+.+.+ +.
T Consensus 54 -------------~~-------------------~~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~ 101 (437)
T 4eqs_A 54 -------------DR-------------------RYALAYTPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQF 101 (437)
T ss_dssp -------------CG-------------------GGTBCCCHHHHHHHHCCEEEETEEEEEEETTTTEEEEEETTTTEEE
T ss_pred -------------ch-------------------hhhhhcCHHHHHHhcCCEEEeCCeEEEEEccCcEEEEEeccCCceE
Confidence 00 0001111222222 588884 568999999999876532 24
Q ss_pred EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchh--hhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 621 EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVT--WEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 621 ~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
++.||+||||||++|+.|++||... ..++...+...... ....+++++|| |+|+|..++++..+
T Consensus 102 ~~~yd~lVIATGs~p~~p~i~g~~~-----~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~ 172 (437)
T 4eqs_A 102 EESYDKLILSPGASANSLGFESDIT-----FTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLH 172 (437)
T ss_dssp EEECSEEEECCCEEECCCCCCCTTE-----ECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCE
T ss_pred EEEcCEEEECCCCccccccccCceE-----EeeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCc
Confidence 6899999999999999999988542 11222222222111 12357889999 99999999888754
No 114
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.51 E-value=1.7e-14 Score=155.84 Aligned_cols=117 Identities=20% Similarity=0.363 Sum_probs=89.9
Q ss_pred cccccccCcchhHHHHHHHHHh-hcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTS-RLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~-~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
|++|||||||+||+++|..|++ ..++.+|+|||+++.+.|.+.++....
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~------------------------------ 50 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAI------------------------------ 50 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCS------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhccc------------------------------
Confidence 5689999999999999999998 334789999999887665554322211
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCcE---
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGSE--- 621 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~~--- 621 (706)
+....+++...+.+.++ .|++++.++|+.++++.++|++.+++.
T Consensus 51 --------------------------------~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~~~g~~~~~ 98 (409)
T 3h8l_A 51 --------------------------------GVRDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMA 98 (409)
T ss_dssp --------------------------------SCCCCCCEEEEHHHHTGGGTCEEEECEEEEEETTTTEEEEECTTSCEE
T ss_pred --------------------------------CCcCHHHHHHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEEccCCcccc
Confidence 11222333444555544 589999999999999999998887754
Q ss_pred -EeeCEEEEecCcccCccCCCCchh
Q psy8791 622 -ISYEYMIVASGIQMYYDRVKGGTT 645 (706)
Q Consensus 622 -i~yd~lViAtGs~~~~p~i~G~~~ 645 (706)
+.||+||+|||++|..|++||+++
T Consensus 99 ~~~~d~lViAtG~~~~~~~ipG~~~ 123 (409)
T 3h8l_A 99 EEEYDYVIVGIGAHLATELVKGWDK 123 (409)
T ss_dssp EEECSEEEECCCCEECGGGSBTHHH
T ss_pred eeeCCEEEECCCCCcCccCCCChhh
Confidence 999999999999999999999874
No 115
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.50 E-value=5.2e-14 Score=144.87 Aligned_cols=153 Identities=14% Similarity=0.170 Sum_probs=101.7
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
|+||+|||||+||+++|..|++. +.+|+|||+++.....+.. ..
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~~~~~~~~-----------~~----------------------- 45 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRA--RKNILLVDAGERRNRFASH-----------SH----------------------- 45 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEEECCCCGGGGCSC-----------CC-----------------------
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCCcccccchh-----------hc-----------------------
Confidence 47999999999999999999998 7899999986532100000 00
Q ss_pred CCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-C-CcEEEeceEEEEEcCCC--eEEcCCCcEE
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-S-GATWVKDKIVSFDPENN--RVRTQAGSEI 622 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-gv~~~~~~v~~id~~~~--~V~~~~g~~i 622 (706)
.+.........++...+.+.+. . +++++.++|++++++.. .|.+.+|+++
T Consensus 46 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~ 99 (297)
T 3fbs_A 46 --------------------------GFLGQDGKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGGRRE 99 (297)
T ss_dssp --------------------------SSTTCTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTEEEEEETTSCEE
T ss_pred --------------------------CCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCCCEE
Confidence 0000000111222233333333 3 78999999999998754 6778888899
Q ss_pred eeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHH
Q psy8791 623 SYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDL 686 (706)
Q Consensus 623 ~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~ 686 (706)
.||+||+|||+.|..|++||.+..... ..............+++++|| |+|+|..|.++
T Consensus 100 ~~d~vviAtG~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~ 163 (297)
T 3fbs_A 100 TAGRLILAMGVTDELPEIAGLRERWGS-----AVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLPDW 163 (297)
T ss_dssp EEEEEEECCCCEEECCCCBTTGGGBTT-----TEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGGGT
T ss_pred EcCEEEECCCCCCCCCCCCCchhhcCC-----eeEEcccCcchhhcCCEEEEEecCccHHHHHHHhhhc
Confidence 999999999999999999998753321 112221222233467899999 88998887654
No 116
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.49 E-value=2.7e-14 Score=159.30 Aligned_cols=192 Identities=18% Similarity=0.171 Sum_probs=112.6
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
.++||||||||+||+++|.+|++. +.+|+|||+++... |.+..+.. |- ..-++.+.
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~--G~~v~iiE~~~~~G----------Gtw~~~~y--pg----------~~~dv~s~ 75 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQ--GLTVRAFEAASGVG----------GVWYWNRY--PG----------ARCDVESI 75 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSC----------THHHHCCC--TT----------CBCSSCTT
T ss_pred CCCCEEEECchHHHHHHHHHHHhC--CCCEEEEeCCCCCC----------CccccCCC--CC----------ceeCCCch
Confidence 457999999999999999999986 78999999976532 22111100 00 00000000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCc--EE-EeceEEEEEcCCC----eEEcC
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGA--TW-VKDKIVSFDPENN----RVRTQ 617 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv--~~-~~~~v~~id~~~~----~V~~~ 617 (706)
...+.+ .+. ....+.+.. ......++...+....+ .++ ++ ++.+|+.++.+.. +|++.
T Consensus 76 ~y~~~f---------~~~--~~~~~~~~~---~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~ 141 (549)
T 4ap3_A 76 DYSYSF---------SPE--LEQEWNWSE---KYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTD 141 (549)
T ss_dssp TSSCCS---------CHH--HHHHCCCSS---SSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEET
T ss_pred hccccc---------ccc--cccCCCCcc---CCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEEC
Confidence 000000 000 000000000 00111222222222222 344 44 5678999987665 78888
Q ss_pred CCcEEeeCEEEEecC--cccCccCCCCchhhhcccccccccccCccc-hhhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 618 AGSEISYEYMIVASG--IQMYYDRVKGGTTSLEDRGKMRGVSDGFST-VTWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 618 ~g~~i~yd~lViAtG--s~~~~p~i~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
+|+++.||+||+||| +.|..|++||++.+... .+++..+. ...+..+|+|+|| |+|+|.+|++.+.+
T Consensus 142 ~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~-----~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~ 216 (549)
T 4ap3_A 142 RGDEVSARFLVVAAGPLSNANTPAFDGLDRFTGD-----IVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQ 216 (549)
T ss_dssp TCCEEEEEEEEECCCSEEECCCCCCTTGGGCCSE-----EEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSE
T ss_pred CCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCc-----eEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCE
Confidence 999999999999999 89999999998754332 12222222 2334578999999 99999999988765
Q ss_pred --hhhhhcccccc
Q psy8791 690 --KMKKEAQWIRF 700 (706)
Q Consensus 690 --~~~~~~~~~~~ 700 (706)
.+.+..+|+-+
T Consensus 217 Vtv~~r~~~~ilp 229 (549)
T 4ap3_A 217 LFVFQRSANYSIP 229 (549)
T ss_dssp EEEEESSCCCEEE
T ss_pred EEEEECCCCcccc
Confidence 35566666543
No 117
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.49 E-value=2.3e-14 Score=156.92 Aligned_cols=160 Identities=15% Similarity=0.143 Sum_probs=104.9
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcce-EEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMF-TLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~-~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
+||||||||+||+++|..|++..++.+|+|||+++...|.+.. +...++..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~---------------------------- 52 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEI---------------------------- 52 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCB----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCc----------------------------
Confidence 4899999999999999999998778999999998765432210 00000000
Q ss_pred CCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhc-cCCcEE-EeceEEEEEcCCCeEEcCC-----C
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PSGATW-VKDKIVSFDPENNRVRTQA-----G 619 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~~-~~~~v~~id~~~~~V~~~~-----g 619 (706)
. ....+++.......+ +.|+++ ...+|.++|++.++|.+.+ +
T Consensus 53 --------------~-----------------~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~ 101 (452)
T 2cdu_A 53 --------------K-----------------NNDPRGLFYSSPEELSNLGANVQMRHQVTNVDPETKTIKVKDLITNEE 101 (452)
T ss_dssp --------------G-----------------GGCGGGGBSCCHHHHHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCE
T ss_pred --------------c-----------------cCCHHHhhhcCHHHHHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCce
Confidence 0 000111111112222 358998 5557999998888887753 4
Q ss_pred cEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 620 SEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 620 ~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+++.||+||||||++|..|++||.+ ...+..++.+.+..........+++++|| |+|+|..++++..
T Consensus 102 ~~~~~d~lviAtGs~p~~p~i~g~~--~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~ 173 (452)
T 2cdu_A 102 KTEAYDKLIMTTGSKPTVPPIPGID--SSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNY 173 (452)
T ss_dssp EEEECSEEEECCCEEECCCCCTTTT--STTEEECSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTC
T ss_pred EEEECCEEEEccCCCcCCCCCCCCC--CCCEEEeCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCC
Confidence 6799999999999999999999976 22232233322222333344568899999 8999998876543
No 118
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.49 E-value=2.3e-14 Score=158.50 Aligned_cols=160 Identities=18% Similarity=0.176 Sum_probs=103.3
Q ss_pred ccccccCcchhHHHHHHHHHhhc-CCCcEEEECCCCCCcCCcce-EEeeccccccccccccccccCCCCccccccccccc
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRL-GKGQVSIVEPTDDHYYQPMF-TLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~-~~~~i~vid~~~~~~~~~~~-~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
+||||||||+||+++|..|++.. ++.+|+|||+++...|.+.. +...++.
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~---------------------------- 87 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQ---------------------------- 87 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTS----------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCc----------------------------
Confidence 79999999999999999999984 45899999998765432210 0000000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhc-cCCcEEE-eceEEEEEcCCCeEEcC-CC--c
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PSGATWV-KDKIVSFDPENNRVRTQ-AG--S 620 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~~~-~~~v~~id~~~~~V~~~-~g--~ 620 (706)
....+++.....+.+ +.|++++ ..+|++||++.++|.+. ++ +
T Consensus 88 ---------------------------------~~~~~~~~~~~~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~ 134 (490)
T 2bc0_A 88 ---------------------------------IAGPEGLFYSDKEELESLGAKVYMESPVQSIDYDAKTVTALVDGKNH 134 (490)
T ss_dssp ---------------------------------SSCSGGGBSCCHHHHHHTTCEEETTCCEEEEETTTTEEEEEETTEEE
T ss_pred ---------------------------------cCCHHHhhhcCHHHHHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEE
Confidence 000011111111222 3588984 56799999988888776 53 5
Q ss_pred EEeeCEEEEecCcccCccCCCCch------hh---hcccccccccccCccchhhh--ccCccEEEE-----cHHHHHHHH
Q psy8791 621 EISYEYMIVASGIQMYYDRVKGGT------TS---LEDRGKMRGVSDGFSTVTWE--QKHKQYQLV-----SPEIRAKAY 684 (706)
Q Consensus 621 ~i~yd~lViAtGs~~~~p~i~G~~------~~---~~~~~~~~~~~~~~~~~~~~--~~~k~vvVi-----G~E~A~~l~ 684 (706)
++.||+||||||++|..|++||.+ ++ ...+..++.+.+........ ..+++|+|| |+|+|..|+
T Consensus 135 ~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~ 214 (490)
T 2bc0_A 135 VETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQ 214 (490)
T ss_dssp EEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHH
T ss_pred EEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHH
Confidence 799999999999999999999975 11 11222222222222222222 467899999 899999988
Q ss_pred HHHh
Q psy8791 685 DLTK 688 (706)
Q Consensus 685 ~~~~ 688 (706)
++..
T Consensus 215 ~~g~ 218 (490)
T 2bc0_A 215 RKGK 218 (490)
T ss_dssp HTTC
T ss_pred HCCC
Confidence 7654
No 119
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.49 E-value=8.3e-15 Score=161.18 Aligned_cols=187 Identities=17% Similarity=0.167 Sum_probs=109.9
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
.++||+|||||+||+++|.+|++. +.+|+|||++. . ||.|. +..+.|.|.++.+...+.......+
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~--g~~V~lie~~~-~----------GG~~~-~~g~ip~k~l~~~~~~~~~~~~~~~ 68 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQ--GAQVTLIERGT-I----------GGTCV-NVGCVPSKIMIRAAHIAHLRRESPF 68 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSS-T----------THHHH-HHSHHHHHHHHHHHHHHHHHHCCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCC-C----------Ccccc-CCCccchHHHHHHHHHHHHHhhhhh
Confidence 467999999999999999999997 78999999862 1 33332 2333555544433211100000000
Q ss_pred CCCceEEEeeecceecCCCcccccCccccccccccc-cccccc-chhhhcc-C-CcEEEeceEEEEEcCCCeEEcCCC--
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKK-LSDSRR-PMKSVLP-S-GATWVKDKIVSFDPENNRVRTQAG-- 619 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~-~-gv~~~~~~v~~id~~~~~V~~~~g-- 619 (706)
..++ .... ....+..+...... .+.+.. .+..+++ . +++++.+++..+|+...+|.+.+|
T Consensus 69 ~~g~-----------~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~ 134 (467)
T 1zk7_A 69 DGGI-----------AATV---PTIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGE 134 (467)
T ss_dssp TTTS-----------CCCC---CCCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSE
T ss_pred cCCc-----------cCCC---CccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCce
Confidence 0000 0000 00000000000000 000110 1223333 4 899999999999987677777788
Q ss_pred cEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 620 SEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 620 ~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+++.||+||||||++|..|++||++.. .+.+..........+++++|| |+|+|..++++..
T Consensus 135 ~~~~~d~lviAtGs~p~~p~i~G~~~~--------~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~ 200 (467)
T 1zk7_A 135 RVVMFDRCLVATGASPAVPPIPGLKES--------PYWTSTEALASDTIPERLAVIGSSVVALELAQAFARLGS 200 (467)
T ss_dssp EEEECSEEEECCCEEECCCCCTTTTTS--------CCBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEEEeCEEEEeCCCCCCCCCCCCCCcC--------ceecHHHHhcccccCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 689999999999999999999997531 112222222333457899999 8999999887654
No 120
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.49 E-value=2.3e-14 Score=161.65 Aligned_cols=159 Identities=18% Similarity=0.188 Sum_probs=105.3
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcc-eEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPM-FTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~-~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
|++|+|||||+||+++|..|++..++.+|+|||+++.+.|.+. ++...++
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~----------------------------- 51 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISG----------------------------- 51 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTS-----------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcC-----------------------------
Confidence 5689999999999999999999877899999999887665432 1000000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccc-cccchhhhcc-CCcEE-EeceEEEEEcCCCeEEcCC---C
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSD-SRRPMKSVLP-SGATW-VKDKIVSFDPENNRVRTQA---G 619 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~gv~~-~~~~v~~id~~~~~V~~~~---g 619 (706)
......+ +......+.+ .++++ ++++|+.||++.+.|.+.+ |
T Consensus 52 --------------------------------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g 99 (565)
T 3ntd_A 52 --------------------------------EIAQRSALVLQTPESFKARFNVEVRVKHEVVAIDRAAKLVTVRRLLDG 99 (565)
T ss_dssp --------------------------------SSCCGGGGBCCCHHHHHHHHCCEEETTEEEEEEETTTTEEEEEETTTC
T ss_pred --------------------------------CcCChHHhhccCHHHHHHhcCcEEEECCEEEEEECCCCEEEEEecCCC
Confidence 0000111 1122222323 48888 4689999999999887643 5
Q ss_pred c--EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchh--hhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 620 S--EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVT--WEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 620 ~--~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+ ++.||+||||||++|..|++||.+ ...+..++...+...... ....+++++|| |+|+|..++++..
T Consensus 100 ~~~~~~~d~lviAtG~~p~~p~ipG~~--~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~ 175 (565)
T 3ntd_A 100 SEYQESYDTLLLSPGAAPIVPPIPGVD--NPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGI 175 (565)
T ss_dssp CEEEEECSEEEECCCEEECCCCCTTCC--STTEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred CeEEEECCEEEECCCCCCCCCCCCCCC--CCCEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCC
Confidence 4 789999999999999999999985 222222222211111111 12357899999 8999998877653
No 121
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.49 E-value=3.6e-14 Score=155.19 Aligned_cols=159 Identities=14% Similarity=0.195 Sum_probs=102.5
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDS 547 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 547 (706)
+||||||||+||+++|..|++..++.+|+|||+++...|.+.. .|.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~--------------~~~-------------------- 46 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAG--------------MQL-------------------- 46 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGG--------------HHH--------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCccccc--------------chh--------------------
Confidence 4899999999999999999998778999999998765432210 000
Q ss_pred CceEEEeeecceecCCCcccccCcccccccccccccccccchhhhc-cCCcEE-EeceEEEEEcCCCeEEcCC---Cc--
Q psy8791 548 SYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PSGATW-VKDKIVSFDPENNRVRTQA---GS-- 620 (706)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~~-~~~~v~~id~~~~~V~~~~---g~-- 620 (706)
+........+++.....+.+ +.|+++ ...+|.++|++.++|.+.+ |+
T Consensus 47 --------------------------~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~ 100 (447)
T 1nhp_A 47 --------------------------YLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEER 100 (447)
T ss_dssp --------------------------HHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEEEEETTTTEEEEEETTTCCEE
T ss_pred --------------------------hhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEEEEeCCCCEEEEEecCCCceE
Confidence 00000000111111112222 358998 5678899999988887753 65
Q ss_pred EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhc--cCccEEEE-----cHHHHHHHHHHHh
Q psy8791 621 EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQ--KHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 621 ~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
++.||+||||||++|..|++||.+ ...+..++...+......... .+++++|| |+|+|..++++..
T Consensus 101 ~~~~d~lviAtG~~p~~p~i~G~~--~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~ 173 (447)
T 1nhp_A 101 VENYDKLIISPGAVPFELDIPGKD--LDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGK 173 (447)
T ss_dssp EEECSEEEECCCEEECCCCSTTTT--SBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEeCCEEEEcCCCCcCCCCCCCCC--CCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCC
Confidence 489999999999999999999975 222222222211111112122 67899999 8999988877654
No 122
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.49 E-value=6.8e-15 Score=161.70 Aligned_cols=184 Identities=19% Similarity=0.183 Sum_probs=111.7
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
..+||+|||||+||+++|..|++. +.+|+|||+++.. ||.|. +..+.|.+.++.....+......
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~--G~~V~liEk~~~~----------GG~~~-~~gciPsk~l~~~a~~~~~~~~~-- 67 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKA--KYNVLMADPKGEL----------GGNCL-YSGCVPSKTVREVIQTAWRLTNI-- 67 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECTTSSS----------SHHHH-HHSHHHHHHHHHHHHHHHHHHHH--
T ss_pred ccceEEEECCCHHHHHHHHHHHhC--CCeEEEEECCCCC----------CCccc-ccCCCchHHHHHHHHHHHHHHhc--
Confidence 358999999999999999999988 8899999976543 34333 22234554444332111110000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccc--cchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCcE-
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSR--RPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGSE- 621 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~~- 621 (706)
.. ......+..+........++. ..+...+. .+++++.+++..+|++...|.+.+|++
T Consensus 68 ---------------~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~ 129 (466)
T 3l8k_A 68 ---------------AN---VKIPLDFSTVQDRKDYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEI 129 (466)
T ss_dssp ---------------HC---SCCCCCHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEE
T ss_pred ---------------cc---CCCCcCHHHHHHHHHhheeccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEE
Confidence 00 000000110000000000111 22333333 689999999999998877888888888
Q ss_pred -EeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 622 -ISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 622 -i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+.||+||||||++|..|++||.+. ........... ..+...+++++|| |+|+|..++++..
T Consensus 130 ~~~~d~lviAtG~~p~~p~i~G~~~----~~t~~~~~~~~--~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~ 196 (466)
T 3l8k_A 130 EAETRYMIIASGAETAKLRLPGVEY----CLTSDDIFGYK--TSFRKLPQDMVIIGAGYIGLEIASIFRLMGV 196 (466)
T ss_dssp EEEEEEEEECCCEEECCCCCTTGGG----SBCHHHHHSTT--CSCCSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEecCEEEECCCCCccCCCCCCccc----eEeHHHHHHHH--HHHhhCCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 999999999999999999999762 11111111000 0223457899999 8999998887653
No 123
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.49 E-value=2.8e-14 Score=152.82 Aligned_cols=159 Identities=15% Similarity=0.169 Sum_probs=101.8
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
.++||||||||+||+++|..|++...+.+|++||+++...|... ++..
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~--------------------~l~~------------ 50 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKP--------------------MLST------------ 50 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGG--------------------GGGG------------
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcc--------------------cccH------------
Confidence 45799999999999999999999855578999998653221100 0000
Q ss_pred CCCceEEEeeecceecCCCcccccCccccccccccccccccc-chhhhc-cCCcEEEe-ceEEEEEcCCCeEEcCCCcEE
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRR-PMKSVL-PSGATWVK-DKIVSFDPENNRVRTQAGSEI 622 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~gv~~~~-~~v~~id~~~~~V~~~~g~~i 622 (706)
........+++.. ....+. ..+++++. .+|+++|++.++|.+.++ ++
T Consensus 51 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~-~~ 100 (384)
T 2v3a_A 51 -----------------------------GFSKNKDADGLAMAEPGAMAEQLNARILTHTRVTGIDPGHQRIWIGEE-EV 100 (384)
T ss_dssp -----------------------------TTTTTCCHHHHEEECHHHHHHHTTCEEECSCCCCEEEGGGTEEEETTE-EE
T ss_pred -----------------------------HHhCCCCHHHhhccCHHHHHHhCCcEEEeCCEEEEEECCCCEEEECCc-EE
Confidence 0000001111211 223332 36899874 579999998888988654 79
Q ss_pred eeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 623 SYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 623 ~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
.||+||||||++|..|++||.+ ...+...+...+..........+++++|| |+|+|..++++..
T Consensus 101 ~~d~lviAtG~~p~~p~i~g~~--~~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~ 169 (384)
T 2v3a_A 101 RYRDLVLAWGAEPIRVPVEGDA--QDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGY 169 (384)
T ss_dssp ECSEEEECCCEEECCCCCBSTT--TTCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred ECCEEEEeCCCCcCCCCCCCcC--cCCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCC
Confidence 9999999999999999999975 12222222222211111122347899999 8999999887654
No 124
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.48 E-value=3.4e-14 Score=154.57 Aligned_cols=110 Identities=26% Similarity=0.562 Sum_probs=84.6
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
+++|||||||+||+++|..|++..++.+|+|||+++.+.|.+.++.+..+.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~----------------------------- 52 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGW----------------------------- 52 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTC-----------------------------
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCc-----------------------------
Confidence 358999999999999999999954578999999988777655443322221
Q ss_pred CCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCcEEeeC
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGSEISYE 625 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~~i~yd 625 (706)
...+++...+...++ .|++++.++|+.+|++.++|.+++++++.||
T Consensus 53 ---------------------------------~~~~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g~~i~~d 99 (430)
T 3h28_A 53 ---------------------------------RKFEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYD 99 (430)
T ss_dssp ---------------------------------SCGGGSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECS
T ss_pred ---------------------------------cCHHHHHHHHHHHHHhcCCEEEEEEEEEEECCCCEEEECCCcEEECC
Confidence 112223333334443 5899999999999999999999999899999
Q ss_pred EEEEecCcccCcc
Q psy8791 626 YMIVASGIQMYYD 638 (706)
Q Consensus 626 ~lViAtGs~~~~p 638 (706)
+||+|||+++..|
T Consensus 100 ~liiAtG~~~~~p 112 (430)
T 3h28_A 100 YLVIATGPKLVFG 112 (430)
T ss_dssp EEEECCCCEEECC
T ss_pred EEEEcCCcccccC
Confidence 9999999998655
No 125
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.48 E-value=5e-14 Score=159.54 Aligned_cols=162 Identities=16% Similarity=0.228 Sum_probs=107.8
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcc-eEEeeccccccccccccccccCCCCccccccccc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPM-FTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIV 543 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~-~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~ 543 (706)
+.+++|||||||+||++||.+|++..++.+|+|||+++.+.|.+. ++...++.
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~-------------------------- 87 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGV-------------------------- 87 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTS--------------------------
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCc--------------------------
Confidence 346799999999999999999999877899999999887665431 11111110
Q ss_pred ccCCCceEEEeeecceecCCCcccccCcccccccccccccc-cccchhhhc-cCCcEE-EeceEEEEEcCCCeEEcC---
Q psy8791 544 SFDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSD-SRRPMKSVL-PSGATW-VKDKIVSFDPENNRVRTQ--- 617 (706)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~gv~~-~~~~v~~id~~~~~V~~~--- 617 (706)
....++ +...+..+. ..++++ ++.+|+.++++.+++.+.
T Consensus 88 -----------------------------------~~~~~~~~~~~~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~ 132 (588)
T 3ics_A 88 -----------------------------------ITERQKLLVQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVT 132 (588)
T ss_dssp -----------------------------------SCCGGGGBSSCHHHHHHHTTCEEECSEEEEEEETTTTEEEEEETT
T ss_pred -----------------------------------CCChHHhhccCHHHHHHhcCcEEEECCEEEEEECCCCEEEEeecC
Confidence 000111 122233333 258888 578999999999988763
Q ss_pred CCc--EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhh--hccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 618 AGS--EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTW--EQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 618 ~g~--~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+|+ ++.||+||||||++|..|++||.++ ...+...+...+....... ...+++++|| |+|+|..++++..
T Consensus 133 ~g~~~~~~~d~lviAtG~~p~~p~i~G~~~-~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~ 211 (588)
T 3ics_A 133 TNETYNEAYDVLILSPGAKPIVPSIPGIEE-AKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGI 211 (588)
T ss_dssp TCCEEEEECSEEEECCCEEECCCCCTTTTT-CTTEEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCEEEECCCCCCCCCCCCCccc-CCCeEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCC
Confidence 565 7899999999999999999999832 2222222222211111111 2357899999 8999999887654
No 126
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.48 E-value=5.3e-14 Score=155.09 Aligned_cols=159 Identities=17% Similarity=0.243 Sum_probs=102.3
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcc-eEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPM-FTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~-~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
|+||||||||+||+++|..|++..++.+|+|||+++...|.+. ++...++
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~----------------------------- 86 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISG----------------------------- 86 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTT-----------------------------
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcC-----------------------------
Confidence 6799999999999999999998766789999999876543221 0000000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccc-hhhhcc-CCcEEEe-ceEEEEEcCCCeEEcC---CC
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRP-MKSVLP-SGATWVK-DKIVSFDPENNRVRTQ---AG 619 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~gv~~~~-~~v~~id~~~~~V~~~---~g 619 (706)
.....+++... ...+.+ .+++++. .+|++||++.++|.+. +|
T Consensus 87 --------------------------------~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g 134 (480)
T 3cgb_A 87 --------------------------------AIASTEKLIARNVKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTK 134 (480)
T ss_dssp --------------------------------SSSCGGGGBSSCHHHHHHTTCCEEESSEEEEEEETTTTEEEEEETTTC
T ss_pred --------------------------------CcCCHHHhhhcCHHHHHhhcCCEEEeCCEEEEEECCCCEEEEEEcCCC
Confidence 00001111111 122223 4899875 6899999988888765 36
Q ss_pred c--EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhh--ccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 620 S--EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWE--QKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 620 ~--~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+ ++.||+||||||++|..|++||.+. ..+..++...+........ ..+++++|| |+|+|..++++..
T Consensus 135 ~~~~~~~d~lviAtG~~p~~p~i~G~~~--~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~ 210 (480)
T 3cgb_A 135 DVFEFSYDRLLIATGVRPVMPEWEGRDL--QGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGK 210 (480)
T ss_dssp CEEEEECSEEEECCCEEECCCCCBTTTS--BTEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTC
T ss_pred ceEEEEcCEEEECCCCcccCCCCCCccC--CCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCC
Confidence 6 7999999999999999999999752 2222222111111111111 167899999 8999988877653
No 127
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.47 E-value=1.5e-14 Score=161.09 Aligned_cols=192 Identities=14% Similarity=0.119 Sum_probs=108.4
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
.++||||||||+||+++|.+|++. +.+|+|||+++... |.+..+. .|-.. + +..++
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~--g~~v~iiE~~~~~G----------Gtw~~~~--yPg~~-~---------d~~~~ 63 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQA--GMKVLGIEAGEDVG----------GTWYWNR--YPGCR-L---------DTESY 63 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSC----------THHHHCC--CTTCB-C---------SSCHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhC--CCCEEEEeCCCCCC----------CccccCC--CCcee-e---------cCchh
Confidence 457999999999999999999986 78999999977542 2221111 11000 0 00000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCc--EE-EeceEEEEEcCCC----eEEcC
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGA--TW-VKDKIVSFDPENN----RVRTQ 617 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv--~~-~~~~v~~id~~~~----~V~~~ 617 (706)
..++.+ .+... ..+.+.. ......++...+....+ .++ ++ ++.+|+.++.+.. +|+++
T Consensus 64 ~y~~~f---------~~~~~--~~~~~~~---~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~ 129 (545)
T 3uox_A 64 AYGYFA---------LKGII--PEWEWSE---NFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLD 129 (545)
T ss_dssp HHCHHH---------HTTSS--TTCCCSB---SSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEET
T ss_pred hccccc---------Ccccc--cCCCccc---cCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEEC
Confidence 000000 00000 0000000 00111122222222222 233 33 5678888876554 78888
Q ss_pred CCcEEeeCEEEEecC--cccCccCCCCchhhhcccccccccccCccchh-------hhccCccEEEE-----cHHHHHHH
Q psy8791 618 AGSEISYEYMIVASG--IQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVT-------WEQKHKQYQLV-----SPEIRAKA 683 (706)
Q Consensus 618 ~g~~i~yd~lViAtG--s~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~k~vvVi-----G~E~A~~l 683 (706)
+|+++.||+||+||| +.|..|++||++.+... .+++..+... .+..+|+|+|| |+|+|.+|
T Consensus 130 ~G~~~~ad~lV~AtG~~s~p~~p~ipG~~~f~g~-----~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~l 204 (545)
T 3uox_A 130 NEEVVTCRFLISATGPLSASRMPDIKGIDSFKGE-----SFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIA 204 (545)
T ss_dssp TTEEEEEEEEEECCCSCBC---CCCTTGGGCCSE-----EEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHH
T ss_pred CCCEEEeCEEEECcCCCCCCcCCCCCCccccCCC-----eEEcccccccccccccccccCCCeEEEECCCccHHHHHHHH
Confidence 999999999999999 89999999998754332 1222222222 44578899999 99999999
Q ss_pred HHHHhh--hhhhhcccccc
Q psy8791 684 YDLTKR--KMKKEAQWIRF 700 (706)
Q Consensus 684 ~~~~~~--~~~~~~~~~~~ 700 (706)
++.+.+ .+.+..+|+.+
T Consensus 205 a~~~~~Vtv~~r~~~~i~p 223 (545)
T 3uox_A 205 AETAKELYVFQRTPNWCTP 223 (545)
T ss_dssp TTTBSEEEEEESSCCCCEE
T ss_pred HhhCCEEEEEEcCCCcccc
Confidence 887654 35566666543
No 128
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.46 E-value=2.9e-14 Score=158.65 Aligned_cols=101 Identities=10% Similarity=0.079 Sum_probs=73.0
Q ss_pred CCc--EE-EeceEEEEEcCCC----eEEcCCCcEEeeCEEEEecC--cccCccCCCCchhhhcccccccccccCccchhh
Q psy8791 595 SGA--TW-VKDKIVSFDPENN----RVRTQAGSEISYEYMIVASG--IQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTW 665 (706)
Q Consensus 595 ~gv--~~-~~~~v~~id~~~~----~V~~~~g~~i~yd~lViAtG--s~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~ 665 (706)
.++ ++ ++.+|++++.+.. +|++.+|+++.||+||+||| +.|..|++||++.+... .+++..+....
T Consensus 100 ~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~-----~~~~~~~~~~~ 174 (540)
T 3gwf_A 100 FDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFEGE-----TIHTAAWPEGK 174 (540)
T ss_dssp TTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCTTGGGCCSE-----EEEGGGCCSSC
T ss_pred cCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCCCccccCCC-----EEEeecCCCcc
Confidence 355 44 6778999987655 68888998999999999999 79999999998754332 22333333344
Q ss_pred hccCccEEEE-----cHHHHHHHHHHHhh--hhhhhcccccc
Q psy8791 666 EQKHKQYQLV-----SPEIRAKAYDLTKR--KMKKEAQWIRF 700 (706)
Q Consensus 666 ~~~~k~vvVi-----G~E~A~~l~~~~~~--~~~~~~~~~~~ 700 (706)
...+|+|+|| |+|+|.+|++.+.+ .+.+..+|+-+
T Consensus 175 ~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p 216 (540)
T 3gwf_A 175 SLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVP 216 (540)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEE
T ss_pred ccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCcccc
Confidence 5578999999 89999999877654 34555665543
No 129
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.46 E-value=3e-13 Score=133.90 Aligned_cols=118 Identities=10% Similarity=0.032 Sum_probs=80.9
Q ss_pred hhHHHHHHHHHHhC-CceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhh------------------
Q psy8791 266 PFYAEKIHDILIGR-GVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPE------------------ 326 (706)
Q Consensus 266 ~~~~~~~~~~l~~~-gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~------------------ 326 (706)
..+.+.+.+.+++. |++++ +++|+++..+++.+..+.+++|+++++|.||+|+|..++..
T Consensus 68 ~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~ 146 (232)
T 2cul_A 68 WAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASY 146 (232)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECC
T ss_pred HHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccch
Confidence 45667788888887 99999 46899998665555444455788999999999999954421
Q ss_pred ------hhcCCCCCCC---------Cc-------eeeC-----ccccccCCCCCEEEccccCCCCCCchHHHHHHhHHHH
Q psy8791 327 ------LATSRLVDQS---------GY-------VNVD-----KATLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVV 379 (706)
Q Consensus 327 ------~~~~~l~~~~---------G~-------i~vd-----~~~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~ 379 (706)
+.+.++.-.+ |. ..+. ..++..|++|+|||+|||+ ... +...+..||+.+
T Consensus 147 ~~l~~~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g--~~~~~~~~g~~~ 223 (232)
T 2cul_A 147 PDLLEDLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REG--DYARMSEEGKRL 223 (232)
T ss_dssp SHHHHHHHHTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCC--CHHHHHHHHHHH
T ss_pred hhhCHHHHhCCCeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCc--cHHHHHHHHHHH
Confidence 2223331000 10 1111 0123336899999999999 533 778899999999
Q ss_pred HHHHHHHH
Q psy8791 380 YDNLSAVM 387 (706)
Q Consensus 380 a~ni~~~l 387 (706)
|+||.+.+
T Consensus 224 a~~i~~~l 231 (232)
T 2cul_A 224 AEHLLHEL 231 (232)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhhc
Confidence 99998765
No 130
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.45 E-value=2e-13 Score=141.67 Aligned_cols=157 Identities=18% Similarity=0.175 Sum_probs=100.1
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCC-cEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKG-QVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~-~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
|+||+|||||+||+++|..|++. +. +|+|||++.. ||.+......
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~--g~~~v~lie~~~~-----------gg~~~~~~~~--------------------- 46 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRG--GVKNAVLFEKGMP-----------GGQITGSSEI--------------------- 46 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCSSEEEECSSST-----------TCGGGGCSCB---------------------
T ss_pred CceEEEECccHHHHHHHHHHHHC--CCCcEEEEcCCCC-----------Cccccccccc---------------------
Confidence 57999999999999999999987 78 9999998421 2221110000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhc-cCCcEEEeceEEEEEcCCC--eEEcCCCcEE
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PSGATWVKDKIVSFDPENN--RVRTQAGSEI 622 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~~~~~~v~~id~~~~--~V~~~~g~~i 622 (706)
.. .+.++. .....++...+.+.+ +.+++++.++|+.++.+.+ +|.+.+|+++
T Consensus 47 ---------------~~------~~~~~~----~~~~~~~~~~l~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~ 101 (311)
T 2q0l_A 47 ---------------EN------YPGVKE----VVSGLDFMQPWQEQCFRFGLKHEMTAVQRVSKKDSHFVILAEDGKTF 101 (311)
T ss_dssp ---------------CC------STTCCS----CBCHHHHHHHHHHHHHTTSCEEECSCEEEEEEETTEEEEEETTSCEE
T ss_pred ---------------cc------CCCCcc----cCCHHHHHHHHHHHHHHcCCEEEEEEEEEEEEcCCEEEEEEcCCCEE
Confidence 00 000000 001112222222222 2588988799999998776 6667888899
Q ss_pred eeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHH
Q psy8791 623 SYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLT 687 (706)
Q Consensus 623 ~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~ 687 (706)
.||+||+|||+.|..|++||.+++... ..............+++|+|| |+|+|..|+++.
T Consensus 102 ~~~~vv~AtG~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g 166 (311)
T 2q0l_A 102 EAKSVIIATGGSPKRTGIKGESEYWGK-----GVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANIC 166 (311)
T ss_dssp EEEEEEECCCEEECCCCCBTHHHHBTT-----TEESCHHHHGGGGTTSEEEEECCSHHHHHHHHHHHTTS
T ss_pred ECCEEEECCCCCCCCCCCCChhhccCC-----cEEEeecCChhhcCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 999999999999999999997643221 111111111223356889999 889888877654
No 131
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.45 E-value=2.1e-14 Score=159.75 Aligned_cols=197 Identities=12% Similarity=0.070 Sum_probs=114.5
Q ss_pred ccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccc-cc
Q psy8791 464 FRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKD-KI 542 (706)
Q Consensus 464 ~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~-~~ 542 (706)
++..+||+|||||+||+++|..|++. +.+|+|||+++...... ....||.|. +..|.|.|.++.+...+... ..
T Consensus 29 ~~~~~DVvVIGgGpaGl~aA~~la~~--G~~V~liEk~~~~~~~~--~~~~GGtc~-~~GciPsk~l~~~~~~~~~~~~~ 103 (519)
T 3qfa_A 29 KSYDYDLIIIGGGSGGLAAAKEAAQY--GKKVMVLDFVTPTPLGT--RWGLGGTCV-NVGCIPKKLMHQAALLGQALQDS 103 (519)
T ss_dssp SSCSEEEEEECCSHHHHHHHHHHHHT--TCCEEEECCCCCCTTCC--CCCTTCHHH-HHSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhC--CCeEEEEeccCcccccc--CCCcccccC-CcCccchHHHHHHHHHHHHHHHH
Confidence 34468999999999999999999998 88999999865221110 011244443 33345655444332111110 00
Q ss_pred cccCCCceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCc
Q psy8791 543 VSFDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGS 620 (706)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~ 620 (706)
..++ +.. .... ...+..+... ....+.+...+...+. .+|+++.+++..+|+....|.+.+|+
T Consensus 104 ~~~g--~~~---------~~~~----~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~ 168 (519)
T 3qfa_A 104 RNYG--WKV---------EETV----KHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGK 168 (519)
T ss_dssp HHTT--BCC---------CSSC----CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCC
T ss_pred HhcC--ccc---------CCcC----ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCC
Confidence 0000 000 0000 0000000000 0001111112222233 69999999999999987777777774
Q ss_pred --EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 621 --EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 621 --~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
++.||+||||||++|..|++||.++.. .+..........+++++|| |+|+|..|+++..+
T Consensus 169 ~~~i~~d~lViATGs~p~~p~i~G~~~~~---------~t~~~~~~l~~~~~~vvVIGgG~ig~E~A~~l~~~G~~ 235 (519)
T 3qfa_A 169 EKIYSAERFLIATGERPRYLGIPGDKEYC---------ISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLD 235 (519)
T ss_dssp CCEEEEEEEEECCCEEECCCCCTTHHHHC---------BCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCC
T ss_pred EEEEECCEEEEECCCCcCCCCCCCccCce---------EcHHHHhhhhhcCCeEEEECCcHHHHHHHHHHHHcCCe
Confidence 799999999999999999999975321 1111222233467889999 89999999887543
No 132
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.43 E-value=3.5e-13 Score=140.81 Aligned_cols=159 Identities=18% Similarity=0.154 Sum_probs=100.8
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
+.++||+|||||+||+++|..|++. +.+|+|||++. . ||.+......
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~-~----------gg~~~~~~~~-------------------- 52 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRA--QLSTLILEKGM-P----------GGQIAWSEEV-------------------- 52 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSC-T----------TGGGGGCSCB--------------------
T ss_pred cccCCEEEECCCHHHHHHHHHHHHc--CCcEEEEeCCC-C----------Cccccccccc--------------------
Confidence 4568999999999999999999997 78999999862 1 2222111000
Q ss_pred cCCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEEeceEEEEEcC--C---CeEEcCC
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPE--N---NRVRTQA 618 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~--~---~~V~~~~ 618 (706)
.. + +.++. . ....++...+.+.+. .|++++.++|++++++ . .+|.+.+
T Consensus 53 ----------------~~-----~-~~~~~---~-~~~~~~~~~l~~~~~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~ 106 (325)
T 2q7v_A 53 ----------------EN-----F-PGFPE---P-IAGMELAQRMHQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGY 106 (325)
T ss_dssp ----------------CC-----S-TTCSS---C-BCHHHHHHHHHHHHHHTTCEEEECCEEEEEECTTSSSCCEEEEES
T ss_pred ----------------cc-----C-CCCCC---C-CCHHHHHHHHHHHHHHcCCEEEeeeEEEEEeccCCCceEEEEECC
Confidence 00 0 00000 0 001112222222222 5889988999999876 4 3677778
Q ss_pred CcEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHH
Q psy8791 619 GSEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLT 687 (706)
Q Consensus 619 g~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~ 687 (706)
|+++.||+||+|||+.|..|++||.++.... ..............+++++|| |+|+|..|+++.
T Consensus 107 g~~~~~~~vv~AtG~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g 175 (325)
T 2q7v_A 107 NGEYRAKAVILATGADPRKLGIPGEDNFWGK-----GVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFA 175 (325)
T ss_dssp SCEEEEEEEEECCCEEECCCCCTTTTTTBTT-----TEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTC
T ss_pred CCEEEeCEEEECcCCCcCCCCCCChhhccCc-----eEEEeccCCHHHcCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 8899999999999999999999997643211 111111111223356889999 888888876553
No 133
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.43 E-value=2.9e-14 Score=157.27 Aligned_cols=186 Identities=14% Similarity=0.130 Sum_probs=109.8
Q ss_pred cccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccc
Q psy8791 463 VFRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKI 542 (706)
Q Consensus 463 ~~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~ 542 (706)
.++.++||+|||||+||+++|..|++. +.+|+|||++.. ||.| .+..|.|.|.++...........
T Consensus 16 ~~~~~~dVvIIGgG~aGl~aA~~la~~--G~~V~liE~~~~-----------GG~~-~~~gc~p~k~l~~~~~~~~~~~~ 81 (478)
T 3dk9_A 16 GAVASYDYLVIGGGSGGLASARRAAEL--GARAAVVESHKL-----------GGTC-VNVGCVPKKVMWNTAVHSEFMHD 81 (478)
T ss_dssp -CEEECSEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCT-----------THHH-HHHSHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCCEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCC-----------CCcc-cccCccchHHHHHHHHHHHHHHH
Confidence 344578999999999999999999998 889999997531 3443 23334555554443211110000
Q ss_pred cccCCCceEEEeeecceecCCCcccccCccccccccc-ccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCc
Q psy8791 543 VSFDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGM-KKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGS 620 (706)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~ 620 (706)
...+.+. .... ...+..+.... ...+.+...+...+. .+++++.+++..+++...+|. .+++
T Consensus 82 ---~~~~g~~--------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~-~~g~ 145 (478)
T 3dk9_A 82 ---HADYGFP--------SCEG----KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIE-VSGK 145 (478)
T ss_dssp ---TTTTTSC--------CCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEE-ETTE
T ss_pred ---HHhcCcc--------CCCC----ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEE-ECCE
Confidence 0000000 0000 00000000000 000111111222222 689999999999998877787 4677
Q ss_pred EEeeCEEEEecCcccCcc---CCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 621 EISYEYMIVASGIQMYYD---RVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 621 ~i~yd~lViAtGs~~~~p---~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
++.||+||||||++|..| ++||.+.. .+..........+++++|| |+|+|..|+++..
T Consensus 146 ~~~~d~lviAtG~~p~~p~~~~i~G~~~~----------~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~ 211 (478)
T 3dk9_A 146 KYTAPHILIATGGMPSTPHESQIPGASLG----------ITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGS 211 (478)
T ss_dssp EEECSCEEECCCEEECCCCTTTSTTGGGS----------BCHHHHTTCCSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEEeeEEEEccCCCCCCCCcCCCCCCcee----------EchHHhhchhhcCccEEEECCCHHHHHHHHHHHHcCC
Confidence 899999999999999999 89997511 1111112223457899999 8999999887654
No 134
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.42 E-value=1.7e-13 Score=143.85 Aligned_cols=165 Identities=15% Similarity=0.138 Sum_probs=101.9
Q ss_pred ccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccc
Q psy8791 464 FRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIV 543 (706)
Q Consensus 464 ~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~ 543 (706)
+..++||+|||||+||+++|..|++. +.+|+|||+++.....+ ||....... .
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~--g~~v~vie~~~~~~~~~------gg~~~~~~~------------------~- 71 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARA--EIKPILYEGMMANGIAA------GGQLTTTTE------------------I- 71 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHT--TCCCEEECCSSBTTBCT------TCGGGGSSE------------------E-
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHC--CCCEEEEecCCCCCCCc------Ccccccchh------------------h-
Confidence 33468999999999999999999998 88999999965222111 222110000 0
Q ss_pred ccCCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEc-----C
Q psy8791 544 SFDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRT-----Q 617 (706)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~-----~ 617 (706)
. .+ +.++. .....++...+...+. .+++++.++|+.++++.+.+.+ .
T Consensus 72 -----------------~-----~~-~~~~~----~~~~~~~~~~~~~~~~~~gv~i~~~~v~~i~~~~~~~~v~~~~~~ 124 (338)
T 3itj_A 72 -----------------E-----NF-PGFPD----GLTGSELMDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNE 124 (338)
T ss_dssp -----------------C-----CS-TTCTT----CEEHHHHHHHHHHHHHHTTCEEECSCEEEEECSSSSEEEEETTCS
T ss_pred -----------------c-----cc-CCCcc----cCCHHHHHHHHHHHHHHcCCEEEEeEEEEEEEcCCEEEEEEEecC
Confidence 0 00 00000 0011122222333333 6899988889999998876654 4
Q ss_pred CCcEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhh--hccCccEEEE-----cHHHHHHHHHHH
Q psy8791 618 AGSEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTW--EQKHKQYQLV-----SPEIRAKAYDLT 687 (706)
Q Consensus 618 ~g~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~k~vvVi-----G~E~A~~l~~~~ 687 (706)
++.++.||+||+|||++|..|++||.+..... ........... ...+++++|| |+|+|..|.++.
T Consensus 125 ~~~~~~~d~vvlAtG~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g 196 (338)
T 3itj_A 125 DAEPVTTDAIILATGASAKRMHLPGEETYWQK-----GISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYG 196 (338)
T ss_dssp SSCCEEEEEEEECCCEEECCCCCTTHHHHBTT-----TEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTS
T ss_pred CCcEEEeCEEEECcCCCcCCCCCCCchhccCc-----cEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 67789999999999999999999997643221 11111111111 2357889999 788888776553
No 135
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.42 E-value=2.8e-14 Score=156.01 Aligned_cols=182 Identities=13% Similarity=0.179 Sum_probs=104.9
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
+++||+|||||+||+++|.+|++. +.+|+|||+++ .||.|. +..|.|.|.++.+......... .
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~--g~~V~liE~~~-----------~GG~~~-~~gciP~k~l~~~a~~~~~~~~--~ 66 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMY--GQKCALIEAKE-----------LGGTCV-NVGCVPKKVMWHAAQIREAIHM--Y 66 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT--TCCEEEEESSC-----------TTHHHH-HHSHHHHHHHHHHHHHHHHHHT--T
T ss_pred ccCCEEEECCCHHHHHHHHHHHhC--CCeEEEEcCCC-----------CCCccc-ccCccChHHHHHHHHHHHHHHH--H
Confidence 468999999999999999999987 88999999863 133332 2233455443332211000000 0
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCcEEe
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGSEIS 623 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~~i~ 623 (706)
...+.+. ..... ..+..+... ....+.+...+...+. .+++++.++++.+|+ ++|.+ +|+++.
T Consensus 67 ~~~~g~~--------~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~--~~v~~-~g~~~~ 131 (450)
T 1ges_A 67 GPDYGFD--------TTINK----FNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDA--KTLEV-NGETIT 131 (450)
T ss_dssp GGGGTEE--------EEEEE----ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEET--TEEEE-TTEEEE
T ss_pred HHhcCcc--------CCCCc----cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecC--CEEEE-CCEEEE
Confidence 0000000 00000 000000000 0001111112222223 689999999999986 46777 777899
Q ss_pred eCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 624 YEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 624 yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
||+||||||++|..|++||.+.. .+..........+++++|| |+|+|..|+++..
T Consensus 132 ~d~lviAtGs~p~~p~i~g~~~~----------~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~ 191 (450)
T 1ges_A 132 ADHILIATGGRPSHPDIPGVEYG----------IDSDGFFALPALPERVAVVGAGYIGVELGGVINGLGA 191 (450)
T ss_dssp EEEEEECCCEEECCCCSTTGGGS----------BCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred eCEEEECCCCCCCCCCCCCccce----------ecHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHhcCC
Confidence 99999999999999999997421 1111112223457899999 8999999887653
No 136
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.41 E-value=6.7e-14 Score=154.23 Aligned_cols=189 Identities=11% Similarity=0.046 Sum_probs=108.9
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
.++||+|||||+||+++|..|++. +.+|+|||+++.. ||.|. +..+.|.|.++.+...+...... .
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~--g~~V~liE~~~~~----------GG~~~-~~g~~Psk~l~~~~~~~~~~~~~-~ 70 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQL--GFKTVCIEKNETL----------GGTCL-NVGCIPSKALLNNSHYYHMAHGT-D 70 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSS----------SHHHH-HHSHHHHHHHHHHHHHHHHHHSS-H
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCCc----------CCccc-ccCccchHHHHHHHHHHHHhhhh-h
Confidence 468999999999999999999998 7899999997643 33332 22335555544432111100000 0
Q ss_pred CCCceEEEeeecceecCCCcccccCccccccccc-ccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCC-C-cE
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGM-KKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQA-G-SE 621 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~-g-~~ 621 (706)
...+.+. .... ...+..+.... ...+.+...+...+. .+++++.++++.+|++..+|.+.+ + ++
T Consensus 71 ~~~~g~~---------~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~ 138 (474)
T 1zmd_A 71 FASRGIE---------MSEV---RLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQV 138 (474)
T ss_dssp HHHTTEE---------ESCE---EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEE
T ss_pred HhhCccc---------cCCC---ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEE
Confidence 0000000 0000 00000000000 000011111223333 689999999989987766677766 4 57
Q ss_pred EeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 622 ISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 622 i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+.||+||||||++|..|++||.+.. . +.+..........+++++|| |+|+|..|+++..
T Consensus 139 ~~~d~lViAtGs~p~~p~i~g~~~~--~------v~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~ 202 (474)
T 1zmd_A 139 IDTKNILIATGSEVTPFPGITIDED--T------IVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGA 202 (474)
T ss_dssp EEEEEEEECCCEEECCCTTCCCCSS--S------EECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEeCEEEECCCCCCCCCCCCCCCcC--c------EEcHHHHhhccccCceEEEECCCHHHHHHHHHHHHcCC
Confidence 9999999999999999999997521 1 11111112223357899999 8999998877653
No 137
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.41 E-value=2.8e-14 Score=157.69 Aligned_cols=195 Identities=15% Similarity=0.119 Sum_probs=112.7
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccc-ccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDK-IVS 544 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~-~~~ 544 (706)
..+||+|||||+||+++|..+++. +.+|+|||+++...+.. ....||.|. +..|.|.|.++.+...+.... ...
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~--G~~V~liEk~~~~~~~~--~~~~GGtc~-~~gciPsk~l~~~~~~~~~~~~~~~ 79 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQL--GKKVAVADYVEPSPRGT--KWGLGGTCV-NVGCIPKKLMHQAALLGGMIRDAHH 79 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECCCCCCTTSC--CCCTTCHHH-HHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC--CCeEEEEEecccccccc--cCCcCCeec-ccCCcccHHHHHHHHHHHHHHHHHh
Confidence 468999999999999999999998 78999999743211100 011244443 333456655444332111100 000
Q ss_pred cCCCceEEEeeecceecCCCcccccCccccccccc-ccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCC--c
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGM-KKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAG--S 620 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g--~ 620 (706)
++ +.. .... ...+..+.... ...+.+...+...+. .+|+++.+++..+|+....|.+.+| .
T Consensus 80 ~g--~~~---------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~ 144 (488)
T 3dgz_A 80 YG--WEV---------AQPV----QHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKAT 144 (488)
T ss_dssp TT--CCC---------CSSC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEE
T ss_pred cC--ccc---------CCcC----ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceE
Confidence 00 000 0000 00000000000 001111111222222 6899999999999988777777777 4
Q ss_pred EEeeCEEEEecCcccCccC-CCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 621 EISYEYMIVASGIQMYYDR-VKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 621 ~i~yd~lViAtGs~~~~p~-i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
++.||+||||||++|..|+ +||.++.. .+..........+++++|| |+|+|..|+++..+
T Consensus 145 ~~~~d~lViATGs~p~~p~~i~G~~~~~---------~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~ 210 (488)
T 3dgz_A 145 LLSAEHIVIATGGRPRYPTQVKGALEYG---------ITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLD 210 (488)
T ss_dssp EEEEEEEEECCCEEECCCSSCBTHHHHC---------BCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCC
T ss_pred EEECCEEEEcCCCCCCCCCCCCCccccc---------CcHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHHcCCc
Confidence 7999999999999999998 99975321 1111222233467889999 89999999877543
No 138
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.40 E-value=5.4e-14 Score=155.31 Aligned_cols=195 Identities=13% Similarity=0.112 Sum_probs=111.7
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCc-CCcceEEeeccccccccccccccccCCCCcccccccc-
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHY-YQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKI- 542 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~-~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~- 542 (706)
+..+||+|||||+||+++|.+|++. +.+|+|||+..... -.. ....||.|. +..|.|.|.++.+...+.....
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~--G~~V~liEk~~~~~~~~~--~~~~GG~c~-~~gciPsk~l~~~~~~~~~~~~~ 81 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLN--GARVACLDFVKPTPTLGT--KWGVGGTCV-NVGCIPKKLMHQASLLGEAVHEA 81 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHT--TCCEEEECCCCCCTTTTC--CCCSSCHHH-HHSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC--CCEEEEEEeccccccccc--cCCcCCeec-ccCchhhHHHHHHHHHHHHHHHH
Confidence 3468999999999999999999998 88999999522110 000 001244443 3344565554443311111000
Q ss_pred cccCCCceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCc
Q psy8791 543 VSFDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGS 620 (706)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~ 620 (706)
..+ ++.+ ..... ..+..+... ....+.+...+...+. .+++++.+++..+++....|.+.+|+
T Consensus 82 ~~~--g~~~---------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~ 146 (483)
T 3dgh_A 82 AAY--GWNV---------DDKIK----PDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGE 146 (483)
T ss_dssp HHT--TBCC---------CCCCC----BCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCC
T ss_pred Hhc--Cccc---------CCcCc----cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCe
Confidence 000 0000 00000 000000000 0000111111222222 68999999999999887777777774
Q ss_pred -EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 621 -EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 621 -~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
++.||+||||||++|..|++||.++.. .+..........+++++|| |+|+|..++++..
T Consensus 147 ~~~~~d~lviATGs~p~~p~i~G~~~~~---------~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~ 211 (483)
T 3dgh_A 147 RTITAQTFVIAVGGRPRYPDIPGAVEYG---------ITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGY 211 (483)
T ss_dssp EEEEEEEEEECCCEEECCCSSTTHHHHC---------BCHHHHTTCSSCCCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEEEcCEEEEeCCCCcCCCCCCCccccc---------CcHHHHhhhhhcCCcEEEECCCHHHHHHHHHHHHcCC
Confidence 799999999999999999999976321 1111122233467899999 8999999987754
No 139
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.40 E-value=7.9e-13 Score=137.65 Aligned_cols=156 Identities=15% Similarity=0.067 Sum_probs=100.2
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
++||+|||||+||+++|..|++. +.+|+|||++ . ||.+......
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~--~----------gg~~~~~~~~---------------------- 58 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARY--MLKTLVIGET--P----------GGQLTEAGIV---------------------- 58 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESS--T----------TGGGGGCCEE----------------------
T ss_pred ccCEEEECccHHHHHHHHHHHHC--CCcEEEEecc--C----------CCeecccccc----------------------
Confidence 57999999999999999999998 7899999985 1 2221110000
Q ss_pred CCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEEeceEEEEEcCCC--eEEcCCCcEEe
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENN--RVRTQAGSEIS 623 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~--~V~~~~g~~i~ 623 (706)
+..+.++. ....++...+.+.+. .+++++.++|+.++++.+ .|.+.+++++.
T Consensus 59 --------------------~~~~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~ 113 (323)
T 3f8d_A 59 --------------------DDYLGLIE-----IQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFK 113 (323)
T ss_dssp --------------------CCSTTSTT-----EEHHHHHHHHHHHHHTTTCCEEESCEEEEEEC--CEEEEESSSCEEE
T ss_pred --------------------cccCCCCC-----CCHHHHHHHHHHHHHHcCCEEEEEEEEEEEecCCEEEEEECCCCEEE
Confidence 00000000 011122223333332 588887799999998754 56778888999
Q ss_pred eCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 624 YEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 624 yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
||+||+|||+.|..|++||.+.+... ..............+++++|| |+|+|..|.+...
T Consensus 114 ~d~lvlAtG~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~ 178 (323)
T 3f8d_A 114 ADSVILGIGVKRRKLGVPGEQEFAGR-----GISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYST 178 (323)
T ss_dssp EEEEEECCCCEECCCCCTTTTTTBTT-----TEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHHHHSS
T ss_pred cCEEEECcCCCCccCCCCchhhhcCC-----ceEEeccCCHhHcCCCEEEEECCCHHHHHHHHHHHHhCC
Confidence 99999999999999999998743221 111111112233457889999 8899888877643
No 140
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.40 E-value=7e-13 Score=140.12 Aligned_cols=172 Identities=12% Similarity=0.083 Sum_probs=102.5
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
|+++||+|||||++|+++|..|+++ +.+|+|||+++... |.+.. +.|...+..
T Consensus 1 m~~~~vvIIG~G~aGl~~A~~l~~~--g~~v~vie~~~~~g----------g~~~~---~~~~~~~~~------------ 53 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSGLSAGYFLRRS--GLSYVILDAEASPG----------GAWQH---AWHSLHLFS------------ 53 (357)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHS--SCCEEEECCSSSSS----------GGGGG---SCTTCBCSS------------
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCCCCC----------CcccC---CCCCcEecC------------
Confidence 3578999999999999999999998 78999999976532 21110 011100000
Q ss_pred cCCCceEEEeeecceecCCCcccccCccccc--ccccccccccccchhhhcc-CCcEEE-eceEEEEEcCCCe---EEcC
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLI--GGGMKKLSDSRRPMKSVLP-SGATWV-KDKIVSFDPENNR---VRTQ 617 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~gv~~~-~~~v~~id~~~~~---V~~~ 617 (706)
+...+ ..+.++.. .......+++...+.+..+ .++++. +.+|+.++++.+. |.+.
T Consensus 54 -----------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~ 115 (357)
T 4a9w_A 54 -----------------PAGWS-SIPGWPMPASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARD 115 (357)
T ss_dssp -----------------CGGGS-CCSSSCCCCCSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETT
T ss_pred -----------------chhhh-hCCCCCCCCCccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeC
Confidence 00000 00000000 0000111222222333333 588884 4689999987776 6677
Q ss_pred CCcEEeeCEEEEecC--cccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHH
Q psy8791 618 AGSEISYEYMIVASG--IQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLT 687 (706)
Q Consensus 618 ~g~~i~yd~lViAtG--s~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~ 687 (706)
+| ++.||+||+||| +.|..|++||.++..... .............+++|+|| |+|+|..|.+.+
T Consensus 116 ~g-~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~ 186 (357)
T 4a9w_A 116 GR-QWLARAVISATGTWGEAYTPEYQGLESFAGIQ-----LHSAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA 186 (357)
T ss_dssp SC-EEEEEEEEECCCSGGGBCCCCCTTGGGCCSEE-----EEGGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS
T ss_pred CC-EEEeCEEEECCCCCCCCCCCCCCCccccCCcE-----EEeccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC
Confidence 77 899999999999 577778999976432221 11111111223357889999 899999987765
No 141
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.40 E-value=5.9e-14 Score=154.72 Aligned_cols=190 Identities=16% Similarity=0.123 Sum_probs=106.9
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
.++||+|||||+||+++|.+|++. +.+|+|||+++ .||.|. +..|.|.|.++.+...+.....
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~--g~~V~liE~~~-----------~GG~~~-n~gciP~k~l~~~~~~~~~~~~--- 72 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY--GAKTLLVEAKA-----------LGGTCV-NVGCVPKKVMWYASDLATRVSH--- 72 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--SCCEEEEESSC-----------TTHHHH-HHSHHHHHHHHHHHHHHHHHTT---
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC--CCcEEEEeCCC-----------cCCcCc-ccCcHHHHHHHHHHHHHHHHHh---
Confidence 468999999999999999999997 89999999863 133332 2233454443322111000000
Q ss_pred CCCceEEEeeecceecCCCcccccCccccccccc-ccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCc--E
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGM-KKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGS--E 621 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~--~ 621 (706)
...+.+. ...+.........+..+.... ...+.+...+...+. .+++++.++++.+|+....|.+.+|+ +
T Consensus 73 ~~~~g~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~ 146 (479)
T 2hqm_A 73 ANEYGLY------QNLPLDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEV 146 (479)
T ss_dssp TTTTTBS------TTSCCSGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEE
T ss_pred HHhcCcc------cccccccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEE
Confidence 0000000 000000000000000000000 000111112222232 68999999999988776667767776 8
Q ss_pred EeeCEEEEecCcccCcc-CCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 622 ISYEYMIVASGIQMYYD-RVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 622 i~yd~lViAtGs~~~~p-~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+.||+||||||++|..| ++||.+.. .+..........+++++|| |+|+|..|+++..
T Consensus 147 ~~~d~lviAtGs~p~~p~~i~g~~~~----------~~~~~~~~l~~~~~~vvViGgG~ig~E~A~~l~~~g~ 209 (479)
T 2hqm_A 147 YSANHILVATGGKAIFPENIPGFELG----------TDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGS 209 (479)
T ss_dssp EEEEEEEECCCEEECCCTTSTTGGGS----------BCHHHHHHCSSCCSEEEEECSSHHHHHHHHHHHHTTC
T ss_pred EEeCEEEEcCCCCCCCCCCCCCcccc----------cchHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 99999999999999999 89997421 1111112223467899999 8999999887653
No 142
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.39 E-value=5.8e-13 Score=138.06 Aligned_cols=154 Identities=16% Similarity=0.132 Sum_probs=98.1
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDS 547 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 547 (706)
+||+|||||+||+++|..|++. +.+|+|||+.. ||.+..... .
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~--g~~v~li~~~~------------gG~~~~~~~-~---------------------- 44 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARK--GIRTGLMGERF------------GGQILDTVD-I---------------------- 44 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT--TCCEEEECSST------------TGGGGGCCE-E----------------------
T ss_pred CCEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCC------------Cceeccccc-c----------------------
Confidence 6899999999999999999987 78999997531 222110000 0
Q ss_pred CceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEEec-eEEEEEcC-----CCeEEcCCCc
Q psy8791 548 SYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKD-KIVSFDPE-----NNRVRTQAGS 620 (706)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~-~v~~id~~-----~~~V~~~~g~ 620 (706)
.. +.........++...+.+.+. .+++++.+ +|++++++ ...|.+++|+
T Consensus 45 -------------~~-----------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~ 100 (310)
T 1fl2_A 45 -------------EN-----------YISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGA 100 (310)
T ss_dssp -------------CC-----------BTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSC
T ss_pred -------------cc-----------ccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCC
Confidence 00 000000011122223333333 58999877 89999875 3467788888
Q ss_pred EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHH
Q psy8791 621 EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLT 687 (706)
Q Consensus 621 ~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~ 687 (706)
++.||+||+|||++|..|++||.+++... ..............+++|+|| |+|+|..|++..
T Consensus 101 ~~~~~~lv~AtG~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g 167 (310)
T 1fl2_A 101 VLKARSIIVATGAKWRNMNVPGEDQYRTK-----GVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIV 167 (310)
T ss_dssp EEEEEEEEECCCEEECCCCCTTTTTTBTT-----TEESCHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTTB
T ss_pred EEEeCEEEECcCCCcCCCCCCChhhcccc-----eeEEeccCcHhhcCCCEEEEECCCHHHHHHHHHHHHhC
Confidence 99999999999999999999997643211 111111111223457899999 889998887654
No 143
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.39 E-value=4.7e-14 Score=156.16 Aligned_cols=190 Identities=13% Similarity=0.148 Sum_probs=110.0
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
.++||+|||||+||+++|..|++. +.+|+|||+++.. ||.|. +..+.|.+.++.....+......
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~--G~~V~liEk~~~~----------GG~~~-~~gciP~k~l~~~~~~~~~~~~~-- 88 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQL--GMKVAVVEKRSTY----------GGTCL-NVGCIPSKALLHASEMFHQAQHG-- 88 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSS----------SHHHH-HHSHHHHHHHHHHHHHHHHHHHS--
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCCC----------CCccc-cccchhhHHHHHHHHHHHHHHhh--
Confidence 357999999999999999999998 8899999986543 34332 23344555544433222111000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCC--cE
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAG--SE 621 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g--~~ 621 (706)
...+.+. ...... .+..+... ....+.+...+...+. .+++++.+++..+++....|.+.+| ++
T Consensus 89 ~~~~g~~--------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~ 156 (491)
T 3urh_A 89 LEALGVE--------VANPKL----NLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQV 156 (491)
T ss_dssp SGGGTEE--------CCCCEE----CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEE
T ss_pred HhhcCcc--------cCCCcc----CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEE
Confidence 0000000 000000 00000000 0001111112222233 6899999999999887777777777 57
Q ss_pred EeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 622 ISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 622 i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+.||+||||||++| +++||+++.... ....+..........+++++|| |+|+|..|+++..
T Consensus 157 ~~~d~lViATGs~p--~~ipg~~~~~~~----~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~ 222 (491)
T 3urh_A 157 LEAKNVVIATGSDV--AGIPGVEVAFDE----KTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGA 222 (491)
T ss_dssp EECSEEEECCCEEC--CCBTTBCCCCCS----SSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTC
T ss_pred EEeCEEEEccCCCC--CCCCCcccccCC----eeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 99999999999986 478887532222 1222333333344568899999 8999999987754
No 144
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.39 E-value=9.4e-14 Score=152.32 Aligned_cols=180 Identities=17% Similarity=0.197 Sum_probs=104.1
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccc-cccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKD-KIVS 544 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~-~~~~ 544 (706)
+++||+|||||+||+++|.+|++. +.+|+|||+++ .||.|. +..|.|.|.++.+...+... ....
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~--g~~V~liE~~~-----------~GG~~~-~~gciP~k~l~~~a~~~~~~~~~~~ 68 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAF--GKRVALIESKA-----------LGGTCV-NVGCVPKKVMWYASHLAEAVRDAPG 68 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSC-----------TTHHHH-HHSHHHHHHHHHHHHHHHHHHHGGG
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC--CCcEEEEcCCC-----------CCCcCc-CcCchhHHHHHHHHHHHHHHhhhhh
Confidence 468999999999999999999987 88999999863 133332 22234544433222110000 0000
Q ss_pred cCCCceEEEeeecceecCCCcccccCccccccccc-ccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCcEE
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGM-KKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGSEI 622 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~~i 622 (706)
+ ++.. ... ...+..+.... ...+.+...+...+. .+++++.++++.+|+ ++|.+ +|+++
T Consensus 69 ~--g~~~----------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~--~~v~~-~g~~~ 129 (463)
T 2r9z_A 69 F--GVQA----------SGG----TLDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDA--HTIEV-EGQRL 129 (463)
T ss_dssp G--TBCC----------C-------CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--TEEEE-TTEEE
T ss_pred c--Cccc----------CCC----CcCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccC--CEEEE-CCEEE
Confidence 0 0000 000 00000000000 001111112222222 689999999988875 47777 67789
Q ss_pred eeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 623 SYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 623 ~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
.||+||||||++|..|++||.+.. .+..........+++++|| |+|+|..|+++..
T Consensus 130 ~~d~lviAtGs~p~~p~i~G~~~~----------~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~G~ 190 (463)
T 2r9z_A 130 SADHIVIATGGRPIVPRLPGAELG----------ITSDGFFALQQQPKRVAIIGAGYIGIELAGLLRSFGS 190 (463)
T ss_dssp EEEEEEECCCEEECCCSCTTGGGS----------BCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EcCEEEECCCCCCCCCCCCCccce----------ecHHHHhhhhccCCEEEEECCCHHHHHHHHHHHhcCC
Confidence 999999999999999999997411 1111112223357899999 8999998887653
No 145
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.38 E-value=4.1e-14 Score=155.65 Aligned_cols=188 Identities=14% Similarity=0.079 Sum_probs=109.0
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
++||+|||||+||+++|.+|++. +.+|+|||+++.. ||.|. +..+.|.|.++.....+..... ..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~--g~~V~lie~~~~~----------GG~~~-~~g~~psk~l~~~~~~~~~~~~--~~ 66 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL--GMKTACVEKRGAL----------GGTCL-NVGCIPSKALLHATHLYHDAHA--NF 66 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSS----------SHHHH-HHSHHHHHHHHHHHHHHHHHHH--TH
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCCc----------CCcCC-CcCcHhHHHHHHHHHHHHHHHH--HH
Confidence 47999999999999999999998 7899999997643 33332 2234565554433211111000 00
Q ss_pred CCceEEEeeecceecCCCcccccCccccccccc-ccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCC--cEE
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGGM-KKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAG--SEI 622 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g--~~i 622 (706)
..+.+. ...... ..+..+.... ...+.+...+...++ .+++++.++++.+|++..+|.+.+| +++
T Consensus 67 ~~~g~~-------~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~ 135 (468)
T 2qae_A 67 ARYGLM-------GGEGVT----MDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEML 135 (468)
T ss_dssp HHHTEE-------CGGGCE----ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEE
T ss_pred HhcCcc-------cCCCCc----cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEE
Confidence 000000 000000 0000000000 000011112222333 5899999988889887667777777 789
Q ss_pred eeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 623 SYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 623 ~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
.||+||||||++|..|+++|.+. .. ..+..+.......+++++|| |+|+|..++++..
T Consensus 136 ~~d~lviAtG~~p~~p~~~g~~~--~~------v~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~ 198 (468)
T 2qae_A 136 ETKKTIIATGSEPTELPFLPFDE--KV------VLSSTGALALPRVPKTMVVIGGGVIGLELGSVWARLGA 198 (468)
T ss_dssp EEEEEEECCCEEECCBTTBCCCS--SS------EECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EcCEEEECCCCCcCCCCCCCCCc--Cc------eechHHHhhcccCCceEEEECCCHHHHHHHHHHHHhCC
Confidence 99999999999999999998652 11 11211222223367899999 8999999887653
No 146
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.38 E-value=1.1e-13 Score=153.32 Aligned_cols=189 Identities=15% Similarity=0.141 Sum_probs=108.5
Q ss_pred cccccccCcchhHHHHHHHHHhhcC-CCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLG-KGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~-~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
++||||||||+||+++|.+|++..| +.+|+|||+++ . ||.|. +..+.|.|.++.....+.....
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~----------GG~~~-~~g~~psk~l~~~a~~~~~~~~--- 66 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-I----------GGAAV-LDDCVPSKTFIASTGLRTELRR--- 66 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-T----------THHHH-HTSHHHHHHHHHHHHHHHHHTT---
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-c----------CCccc-CcCccchHHHHHHHHHHHHHHH---
Confidence 3799999999999999999999866 78999999865 2 33332 2233565554443221111000
Q ss_pred CCCceEEEeeecceecCCCcccccCccccccccc-ccccccccchhhhcc-CCcEEEeceEEEEEc------CCCeEEcC
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGM-KKLSDSRRPMKSVLP-SGATWVKDKIVSFDP------ENNRVRTQ 617 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~------~~~~V~~~ 617 (706)
...+.+. ...... ...+..+.... ...+.+...+...++ .|++++.++++++|+ ....|.+.
T Consensus 67 ~~~~g~~-----~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~ 136 (499)
T 1xdi_A 67 APHLGFH-----IDFDDA-----KISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAA 136 (499)
T ss_dssp TTTTTBC----------------CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECT
T ss_pred HHhCCCc-----cccCCC-----ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeC
Confidence 0000000 000000 00000000000 000011112233333 689999999999988 33345666
Q ss_pred CCc--EEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 618 AGS--EISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 618 ~g~--~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+|+ ++.||+||||||++|..|++||.+.. . +.+..........+++++|| |+|+|..+.++..
T Consensus 137 ~g~~~~~~~d~lviATGs~p~~p~i~g~~~~--~------v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~ 206 (499)
T 1xdi_A 137 DGSTSEHEADVVLVATGASPRILPSAQPDGE--R------ILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYTELGV 206 (499)
T ss_dssp TSCEEEEEESEEEECCCEEECCCGGGCCCSS--S------EEEGGGGGGCSSCCSSEEEESCSHHHHHHHHHHHHTTC
T ss_pred CCcEEEEEeCEEEEcCCCCCCCCCCCCCCcC--c------EEehhHhhhhhccCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 776 79999999999999999999997521 1 11222222333457899999 8999998887653
No 147
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.36 E-value=2.3e-13 Score=150.39 Aligned_cols=191 Identities=13% Similarity=0.140 Sum_probs=104.5
Q ss_pred ccccccccCcchhHHHHHHHHHh-hcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTS-RLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~-~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
.++||+|||||+||+++|.+|++ . +.+|+|||+.... -.+.-.. .||.|.. ..|.|.|.++.+...+.....
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~--G~~V~liE~~~~~-~~~~~~~-~GG~~~~-~gciP~k~l~~~a~~~~~~~~-- 78 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLY--GKRVAVVDVQTSH-GPPFYAA-LGGTCVN-VGCVPKKLMVTGAQYMDHLRE-- 78 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHH--CCCEEEEESCSSS-BTTTBCB-TTHHHHH-HSHHHHHHHHHHHHHHHHHHH--
T ss_pred cccCEEEECCChhHHHHHHHHHHhc--CCeEEEEeccccc-ccccCCC-CCCeeec-CCcchHHHHHHHHHHHHHHhH--
Confidence 46899999999999999999999 7 8899999931100 0000001 2444332 223465544332211100000
Q ss_pred cCCCceEEEeeecceecCCCcccccCccccccccc-ccccccccchhhhcc-C-CcEEEeceEEEEEcCCCeEEcC---C
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGM-KKLSDSRRPMKSVLP-S-GATWVKDKIVSFDPENNRVRTQ---A 618 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~-gv~~~~~~v~~id~~~~~V~~~---~ 618 (706)
...+.+. .... . ....+..+.... ...+.+...+...+. . +|+++.++++.+|+ ++|.+. +
T Consensus 79 -~~~~g~~--------~~~~-~-~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~--~~v~v~~~~~ 145 (495)
T 2wpf_A 79 -SAGFGWE--------FDGS-S-VKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESK--NVVVVRETAD 145 (495)
T ss_dssp -HHTTTEE--------CCGG-G-CEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEET--TEEEEESSSS
T ss_pred -HHhcCcc--------cCCc-c-cccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeC--CEEEEeecCC
Confidence 0000000 0000 0 000000000000 001111122223333 5 89999999999985 467665 4
Q ss_pred -----CcEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHH
Q psy8791 619 -----GSEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDL 686 (706)
Q Consensus 619 -----g~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~ 686 (706)
++++.||+||||||++|..|++||.+... +..........+++++|| |+|+|..|+++
T Consensus 146 ~~~~~~~~~~~d~lViATGs~p~~p~i~G~~~~~----------~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~ 213 (495)
T 2wpf_A 146 PKSAVKERLQADHILLATGSWPQMPAIPGIEHCI----------SSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAY 213 (495)
T ss_dssp TTSCEEEEEEEEEEEECCCEEECCCCCTTGGGCE----------EHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred ccCCCCeEEEcCEEEEeCCCCcCCCCCCCccccc----------cHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHhh
Confidence 67899999999999999999999974211 111111223357899999 89999999877
No 148
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.36 E-value=1.5e-12 Score=135.10 Aligned_cols=158 Identities=18% Similarity=0.139 Sum_probs=97.9
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEE-ECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSI-VEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIV 543 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~v-id~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~ 543 (706)
..|+||+|||||+||+++|..|++. +.+|+| +|++. . ||.+......
T Consensus 2 ~~~~~vvIIG~G~aGl~aA~~l~~~--g~~v~li~e~~~-~----------gG~~~~~~~~------------------- 49 (315)
T 3r9u_A 2 NAMLDVAIIGGGPAGLSAGLYATRG--GLKNVVMFEKGM-P----------GGQITSSSEI------------------- 49 (315)
T ss_dssp CSCEEEEEECCSHHHHHHHHHHHHH--TCSCEEEECSSS-T----------TGGGGGCSCB-------------------
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC--CCCeEEEEeCCC-C----------Cceeeeecee-------------------
Confidence 3578999999999999999999998 789999 99832 1 2221111000
Q ss_pred ccCCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEEeceEEEEEcCC--CeEE--cCC
Q psy8791 544 SFDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPEN--NRVR--TQA 618 (706)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~--~~V~--~~~ 618 (706)
. ..|.++ ......++...+...+. .+++++.++|+.+ ++. +.+. +.+
T Consensus 50 -----------------~------~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i-~~~~~~~~~v~~~~ 101 (315)
T 3r9u_A 50 -----------------E------NYPGVA----QVMDGISFMAPWSEQCMRFGLKHEMVGVEQI-LKNSDGSFTIKLEG 101 (315)
T ss_dssp -----------------C------CSTTCC----SCBCHHHHHHHHHHHHTTTCCEEECCCEEEE-EECTTSCEEEEETT
T ss_pred -----------------c------cCCCCC----CCCCHHHHHHHHHHHHHHcCcEEEEEEEEEE-ecCCCCcEEEEEec
Confidence 0 000000 00011222233333333 5899988899999 444 3333 433
Q ss_pred CcEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHH
Q psy8791 619 GSEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLT 687 (706)
Q Consensus 619 g~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~ 687 (706)
+.++.||+||+|||+.|..|++||.+..... ..............+++++|| |+|+|..|.+..
T Consensus 102 ~~~~~~d~lvlAtG~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g 170 (315)
T 3r9u_A 102 GKTELAKAVIVCTGSAPKKAGFKGEDEFFGK-----GVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANIC 170 (315)
T ss_dssp SCEEEEEEEEECCCEEECCCCCBTTTTTBTT-----TEESCHHHHGGGGTTSEEEEECCBHHHHHHHHHHHTTS
T ss_pred CCEEEeCEEEEeeCCCCCCCCCCChhhcCCC-----eEEeeecccccccCcCEEEEECCCHHHHHHHHHHHhhC
Confidence 3399999999999999999999998743221 122222222333467889999 788888876653
No 149
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.36 E-value=6.3e-13 Score=138.43 Aligned_cols=159 Identities=16% Similarity=0.141 Sum_probs=99.1
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
|.++||+|||||+||+++|..|++. +.+|+|||+... ||.+......
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~-----------gg~~~~~~~~-------------------- 49 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARA--NLQPVLITGMEK-----------GGQLTTTTEV-------------------- 49 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTT--TCCCEEECCSST-----------TGGGGGCSBC--------------------
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHC--CCcEEEEccCCC-----------CceEecchhh--------------------
Confidence 4568999999999999999999987 789999996321 2211100000
Q ss_pred cCCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhc-cCCcEEEeceEEEEEcCCCeEE-cCCCcEE
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PSGATWVKDKIVSFDPENNRVR-TQAGSEI 622 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~~~~~~v~~id~~~~~V~-~~~g~~i 622 (706)
. ..+.++. . ....++...+.... +.+++++.++|+.++++.+.+. +.+++++
T Consensus 50 ----------------~------~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~~~~ 103 (320)
T 1trb_A 50 ----------------E------NWPGDPN---D-LTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEY 103 (320)
T ss_dssp ----------------C------CSTTCCS---S-CBHHHHHHHHHHHHHHTTCEEECCCEEEEECSSSSEEEEESSCEE
T ss_pred ----------------h------hCCCCCC---C-CCHHHHHHHHHHHHHHCCCEEEEeeeeEEEecCCEEEEEeCCCEE
Confidence 0 0000000 0 00111122222222 2589998889999998776554 5677899
Q ss_pred eeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHH
Q psy8791 623 SYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLT 687 (706)
Q Consensus 623 ~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~ 687 (706)
.||+||+|||++|..|++||.+..... ..............+++|+|| |+|+|..|+++.
T Consensus 104 ~~~~lv~AtG~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g 168 (320)
T 1trb_A 104 TCDALIIATGASARYLGLPSEEAFKGR-----GVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIA 168 (320)
T ss_dssp EEEEEEECCCEEECCCCCHHHHHTBTT-----TEESCHHHHGGGGTTSEEEEECSSHHHHHHHHHHTTTS
T ss_pred EcCEEEECCCCCcCCCCCCChHHhCCc-----eeEecccCCccccCCCeEEEECCCHHHHHHHHHHHhcC
Confidence 999999999999998889887542111 111111112223467889999 888888876553
No 150
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.35 E-value=1.3e-13 Score=151.10 Aligned_cols=184 Identities=15% Similarity=0.147 Sum_probs=107.6
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
++||+|||||+||+++|.+|++. +.+|+|||++. . ||.|. +..+.|.|.++.....+..... .
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~--g~~V~lie~~~-~----------gG~~~-~~g~~p~k~l~~~~~~~~~~~~---~ 65 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQL--GQKVTIVEKGN-L----------GGVCL-NVGCIPSKALISASHRYEQAKH---S 65 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT--TCCEEEEESSC-T----------THHHH-HTSHHHHHHHHHHHHHHHHHHT---C
T ss_pred cCCEEEECCCHHHHHHHHHHHhC--CCeEEEEECCC-C----------CCcCc-CcCchhhHHHHHHHHHHHHHHH---H
Confidence 57999999999999999999998 78999999862 1 33332 2234555554433221111000 0
Q ss_pred CCceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCC-cEEe
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAG-SEIS 623 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g-~~i~ 623 (706)
..+.+. -.... ..+..+... ....+.+...+...+. .+++++.+++..+|++...|.+.+| +++.
T Consensus 66 ~~~g~~--------~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~i~ 133 (455)
T 1ebd_A 66 EEMGIK--------AENVT----IDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYT 133 (455)
T ss_dssp GGGTEE--------CCSCE----ECHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTEEEEEE
T ss_pred HhcCcc--------cCCCc----cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCcEEEE
Confidence 000000 00000 000000000 0000111112223333 6899999998888876666777777 6899
Q ss_pred eCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 624 YEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 624 yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
||+||||||++|..|+++|.+.. ..+..........+++++|| |+|+|..|+++..
T Consensus 134 ~d~lViATGs~p~~~~~~g~~~~---------v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~ 194 (455)
T 1ebd_A 134 FKNAIIATGSRPIELPNFKFSNR---------ILDSTGALNLGEVPKSLVVIGGGYIGIELGTAYANFGT 194 (455)
T ss_dssp CSEEEECCCEEECCBTTBCCCSS---------EECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred eCEEEEecCCCCCCCCCCCccce---------EecHHHHhccccCCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 99999999999999999886521 11111122223357899999 8999999887654
No 151
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.35 E-value=9.7e-14 Score=152.82 Aligned_cols=188 Identities=16% Similarity=0.146 Sum_probs=108.0
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
.++||+|||||+||+++|..|++. +.+|+|||+++.. ||.|. +..+.|.|.++.....+..... .
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~--g~~V~liE~~~~~----------GG~~~-~~g~~p~k~l~~~~~~~~~~~~--~ 69 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQL--GFKTTCIEKRGAL----------GGTCL-NVGCIPSKALLHSSHMYHEAKH--S 69 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSS----------CCSHH-HHSHHHHHHHHHHHHHHHHHHH--T
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCCc----------ccccc-CcCccchHHHHHHHHHHHHHHH--H
Confidence 468999999999999999999998 7899999997643 33332 2223455544333211111000 0
Q ss_pred CCCceEEEeeecceecCCCcccccCccccccccc-ccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCC--cE
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGM-KKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAG--SE 621 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g--~~ 621 (706)
...+.+. ..... ..+..+.... ...+.+...+...+. .+++++.++++.+|++..+|.+.+| ++
T Consensus 70 ~~~~g~~--------~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~ 137 (470)
T 1dxl_A 70 FANHGVK--------VSNVE----IDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTV 137 (470)
T ss_dssp HHHHTEE--------ESCEE----ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEE
T ss_pred HHhcCcc--------cCCCc----cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEE
Confidence 0000000 00000 0000000000 000111111222222 5899999888888876556666677 68
Q ss_pred EeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 622 ISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 622 i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+.||+||+|||++|..|+++|.+. .. ..+..........+++++|| |+|+|..|+++..
T Consensus 138 i~~d~lIiAtGs~p~~p~~~g~~~--~~------v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~ 201 (470)
T 1dxl_A 138 VKGKHIIIATGSDVKSLPGVTIDE--KK------IVSSTGALALSEIPKKLVVIGAGYIGLEMGSVWGRIGS 201 (470)
T ss_dssp EECSEEEECCCEEECCBTTBCCCS--SS------EECHHHHTTCSSCCSEEEESCCSHHHHHHHHHHHHHTC
T ss_pred EEcCEEEECCCCCCCCCCCCCCCc--cc------EEeHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 999999999999999999998652 11 11111222223357899999 8999999887653
No 152
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.35 E-value=1.6e-12 Score=136.41 Aligned_cols=159 Identities=20% Similarity=0.178 Sum_probs=99.3
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
+.++||+|||||+||+++|..|++. +.+|+|||++.. ||.+.....
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~-----------gg~~~~~~~--------------------- 57 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARA--QLAPLVFEGTSF-----------GGALMTTTD--------------------- 57 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHT--TCCCEEECCSSC-----------SCGGGSCSC---------------------
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCC-----------CCceeccch---------------------
Confidence 3468999999999999999999987 789999996421 222110000
Q ss_pred cCCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhc-cCCcEEEeceEEEEEcCC-CeE-EcCCCcE
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PSGATWVKDKIVSFDPEN-NRV-RTQAGSE 621 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~~~~~~v~~id~~~-~~V-~~~~g~~ 621 (706)
+.. .+.++. . ....++...+.+.. +.+++++.++|+.++..+ .+| .+.+|++
T Consensus 58 ---------------~~~------~~~~~~---~-~~~~~~~~~l~~~~~~~~v~~~~~~v~~i~~~~~~~v~~~~~g~~ 112 (335)
T 2a87_A 58 ---------------VEN------YPGFRN---G-ITGPELMDEMREQALRFGADLRMEDVESVSLHGPLKSVVTADGQT 112 (335)
T ss_dssp ---------------BCC------STTCTT---C-BCHHHHHHHHHHHHHHTTCEEECCCEEEEECSSSSEEEEETTSCE
T ss_pred ---------------hhh------cCCCCC---C-CCHHHHHHHHHHHHHHcCCEEEEeeEEEEEeCCcEEEEEeCCCCE
Confidence 000 000000 0 00111222222222 258999888899999732 357 7778889
Q ss_pred EeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHH
Q psy8791 622 ISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLT 687 (706)
Q Consensus 622 i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~ 687 (706)
+.||+||+|||+.|..|++||.+.+... ..............+++|+|| |+|+|..|+++.
T Consensus 113 ~~~d~lviAtG~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g 178 (335)
T 2a87_A 113 HRARAVILAMGAAARYLQVPGEQELLGR-----GVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFA 178 (335)
T ss_dssp EEEEEEEECCCEEECCCCCTHHHHTBTT-----TEESCHHHHGGGGTTCEEEEECSSHHHHHHHHHHTTTC
T ss_pred EEeCEEEECCCCCccCCCCCchHhccCC-----ceEEeeccchhhcCCCEEEEECCCHHHHHHHHHHHHhC
Confidence 9999999999999999999987643211 111111112222457899999 888888876553
No 153
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.34 E-value=3.2e-13 Score=148.20 Aligned_cols=179 Identities=19% Similarity=0.237 Sum_probs=102.1
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
+++||+|||||+||+++|.+|++. +.+|+|||+++. ||.|. +..+.|.|.++.+...+......
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~~--g~~V~lie~~~~-----------GG~~~-~~g~iP~k~l~~~~~~~~~~~~~-- 68 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQL--GLKVLAVEAGEV-----------GGVCL-NVGCIPTKALLHAAETLHHLKVA-- 68 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCT-----------THHHH-HTSHHHHHHHHHHHHHHHHHHHH--
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCCC-----------CCCCC-CcChHHHHHHHHHHHHHHHHHhH--
Confidence 358999999999999999999987 789999998651 33332 22334555444332111110000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCcEEe
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGSEIS 623 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~~i~ 623 (706)
..+.+ ..... ..+..+... ....+.+...+...++ .|++++.++++.+|+ ++|.+. |++++
T Consensus 69 -~~~g~---------~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~--~~v~v~-g~~~~ 131 (464)
T 2eq6_A 69 -EGFGL---------KAKPE----LDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGP--KEVEVG-GERYG 131 (464)
T ss_dssp -GGGTE---------ECCCE----ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--TEEEET-TEEEE
T ss_pred -HhcCC---------CCCCC----cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccC--CEEEEc-cEEEE
Confidence 00000 00000 000000000 0000111111222333 689999999888875 477776 67899
Q ss_pred eCEEEEecCcccCccC-CCCchhhhcccccccccccCccchhhhc-cCccEEEE-----cHHHHHHHHHHH
Q psy8791 624 YEYMIVASGIQMYYDR-VKGGTTSLEDRGKMRGVSDGFSTVTWEQ-KHKQYQLV-----SPEIRAKAYDLT 687 (706)
Q Consensus 624 yd~lViAtGs~~~~p~-i~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~k~vvVi-----G~E~A~~l~~~~ 687 (706)
||+||||||++|..|+ +||.. . +.+......... .+++++|| |+|+|..|+++.
T Consensus 132 ~d~lViATGs~p~~p~gi~~~~----~------v~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g 192 (464)
T 2eq6_A 132 AKSLILATGSEPLELKGFPFGE----D------VWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLG 192 (464)
T ss_dssp EEEEEECCCEEECCBTTBCCSS----S------EECHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTT
T ss_pred eCEEEEcCCCCCCCCCCCCCCC----c------EEcHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCC
Confidence 9999999999999886 66621 1 111111122222 57899999 899998887764
No 154
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.34 E-value=3.5e-13 Score=147.66 Aligned_cols=184 Identities=14% Similarity=0.087 Sum_probs=103.5
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
.++||+|||||+||+++|.++++. +.+|+|||++. . ||.|. +..+.|.|.++.+...+........
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~-~----------GG~~~-~~g~~Psk~l~~~~~~~~~~~~~~~ 69 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQL--GIPTVLVEGQA-L----------GGTCL-NIGCIPSKALIHVAEQFHQASRFTE 69 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHH--TCCEEEECSSC-T----------THHHH-HHSHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC--CCEEEEEccCC-C----------CCcCC-CcCcHhHHHHHHHHHHHHHHhhccc
Confidence 468999999999999999999998 78999999832 1 34443 2334566555443321111000000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCcEEe
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGSEIS 623 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~~i~ 623 (706)
...+.+. .... ...+..+... ....+.+...+..+++ .|++++.+++..++. ++|.+++ +++.
T Consensus 70 ~~~~g~~--------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~--~~v~v~~-~~~~ 134 (458)
T 1lvl_A 70 PSPLGIS--------VASP----RLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDG--KQVEVDG-QRIQ 134 (458)
T ss_dssp CCTTCCC--------CCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEET--TEEEETT-EEEE
T ss_pred ccccCcc--------cCCC----ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccC--CEEEEee-EEEE
Confidence 0000000 0000 0000000000 0000111111223333 689999999888874 5787766 7899
Q ss_pred eCEEEEecCcccCccC-CCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 624 YEYMIVASGIQMYYDR-VKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 624 yd~lViAtGs~~~~p~-i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
||+||||||++|..|+ +|. +. . ..+..+.......+++++|| |+|+|..|+++..
T Consensus 135 ~d~lviATGs~p~~~~~~~~-~~---~------v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~ 195 (458)
T 1lvl_A 135 CEHLLLATGSSSVELPMLPL-GG---P------VISSTEALAPKALPQHLVVVGGGYIGLELGIAYRKLGA 195 (458)
T ss_dssp CSEEEECCCEEECCBTTBCC-BT---T------EECHHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHHTC
T ss_pred eCEEEEeCCCCCCCCCCCCc-cC---c------EecHHHHhhhhccCCeEEEECcCHHHHHHHHHHHHCCC
Confidence 9999999999998775 552 21 1 11111112222357899999 9999999887754
No 155
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.34 E-value=1.6e-10 Score=127.73 Aligned_cols=75 Identities=13% Similarity=0.083 Sum_probs=47.7
Q ss_pred CCceEEeecEEEECCCCCch--hhhhc-C-CC-CCCCCceeeCccccccC-------CCCCEEEccccCC---CCCCchH
Q psy8791 305 DKTERLPYAIMHVTPPMGPV--PELAT-S-RL-VDQSGYVNVDKATLQHV-------KYSNVFAIGDCSN---LPTSKTA 369 (706)
Q Consensus 305 ~~g~~i~~D~vI~a~G~~~~--~~~~~-~-~l-~~~~G~i~vd~~~l~~~-------~~~~Ifa~GD~~~---~~~~~~~ 369 (706)
++|+++++|.||+|||++++ .++.. . .+ .+.+|...|+. .+++. ..++||+.|=+-. ...|.+.
T Consensus 391 ~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~r-dy~~~~~~~~~~~~~~i~~qg~~~~thG~~~~~Ls 469 (501)
T 4b63_A 391 DVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPHR-DYRVEMDPSKVSSEAGIWLQGCNERTHGLSDSLLS 469 (501)
T ss_dssp -CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCBCT-TSBBCCCTTTBCTTCEEEECSCCHHHHCTTTTSST
T ss_pred CCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeeeCC-CcEEeecCCccCCCceEEecCCCcccCCcchhhHH
Confidence 47889999999999999987 34433 2 23 56778888876 34432 2467999984321 2234344
Q ss_pred HHHHHhHHHHH
Q psy8791 370 AAVAGQCKVVY 380 (706)
Q Consensus 370 ~~a~~qg~~~a 380 (706)
..|.+.++++.
T Consensus 470 ~~a~R~~~I~~ 480 (501)
T 4b63_A 470 VLAVRGGEMVQ 480 (501)
T ss_dssp THHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 45677665443
No 156
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.34 E-value=2e-12 Score=134.57 Aligned_cols=156 Identities=19% Similarity=0.167 Sum_probs=96.6
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
..+||+|||||+||+++|..|++. +.+|+|||++.. ||.+......
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~-----------gg~~~~~~~~--------------------- 60 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARS--GFSVAILDKAVA-----------GGLTAEAPLV--------------------- 60 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSST-----------TGGGGGCSCB---------------------
T ss_pred CCCcEEEECcCHHHHHHHHHHHhC--CCcEEEEeCCCC-----------Cccccccchh---------------------
Confidence 357999999999999999999998 789999998421 2221110000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhc-cCCcEEEeceEEEEEcCCC--eEEcCCCcEE
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PSGATWVKDKIVSFDPENN--RVRTQAGSEI 622 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~~~~~~v~~id~~~~--~V~~~~g~~i 622 (706)
.. + +.+. .....++...+.+.. +.+++++.++|+.++.+.+ +|.+ +++++
T Consensus 61 ---------------~~-----~-~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~-~~~~~ 113 (319)
T 3cty_A 61 ---------------EN-----Y-LGFK-----SIVGSELAKLFADHAANYAKIREGVEVRSIKKTQGGFDIET-NDDTY 113 (319)
T ss_dssp ---------------CC-----B-TTBS-----SBCHHHHHHHHHHHHHTTSEEEETCCEEEEEEETTEEEEEE-SSSEE
T ss_pred ---------------hh-----c-CCCc-----ccCHHHHHHHHHHHHHHcCCEEEEeeEEEEEEeCCEEEEEE-CCCEE
Confidence 00 0 0000 000011112222222 2588988889999997666 4555 56789
Q ss_pred eeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHH
Q psy8791 623 SYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLT 687 (706)
Q Consensus 623 ~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~ 687 (706)
.||+||+|||+.|..|++||.+..... ..............+++++|| |+|+|..|+++.
T Consensus 114 ~~~~li~AtG~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g 178 (319)
T 3cty_A 114 HAKYVIITTGTTHKHLGVKGESEYFGK-----GTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYV 178 (319)
T ss_dssp EEEEEEECCCEEECCCCCBTTTTTBTT-----TEESCHHHHGGGGBTSEEEEECCSHHHHHHHHHHTTTB
T ss_pred EeCEEEECCCCCcccCCCCChHHhCCc-----eEEEEEecchhhcCCCeEEEECCCHHHHHHHHHHHhhC
Confidence 999999999999999999987542211 111111111223356889999 788888876553
No 157
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.34 E-value=1.5e-12 Score=136.11 Aligned_cols=158 Identities=13% Similarity=0.134 Sum_probs=100.2
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
.++||+|||||+||+++|..|++. +.+|+|||+++... |.... ..|...+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~~g----------G~~~~---~~~~~~~--------------- 55 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMR--QASVKIIESLPQLG----------GQLSA---LYPEKYI--------------- 55 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSC----------HHHHH---HCTTSEE---------------
T ss_pred ccceEEEECCCHHHHHHHHHHHHC--CCCEEEEEcCCCCC----------ceehh---cCCCceE---------------
Confidence 468999999999999999999997 78999999977532 21100 0000000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEE-eceEEEEEcCCC---eEEcCCCc
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWV-KDKIVSFDPENN---RVRTQAGS 620 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~-~~~v~~id~~~~---~V~~~~g~ 620 (706)
...+.++ ....+++...+.+.+. .+++++ +.+|+.++++.+ .|.+.+|+
T Consensus 56 ---------------------~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~ 109 (332)
T 3lzw_A 56 ---------------------YDVAGFP-----KIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET 109 (332)
T ss_dssp ---------------------CCSTTCS-----SEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE
T ss_pred ---------------------eccCCCC-----CCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE
Confidence 0000000 0011222233333333 578885 689999999876 67888875
Q ss_pred EEeeCEEEEecCc---ccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHH
Q psy8791 621 EISYEYMIVASGI---QMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDL 686 (706)
Q Consensus 621 ~i~yd~lViAtGs---~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~ 686 (706)
+.||+||+|||+ .|..|++||.+.+... .....+ .......+++++|| |+|+|..|.+.
T Consensus 110 -~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~-----~~~~~~-~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~ 176 (332)
T 3lzw_A 110 -HYSKTVIITAGNGAFKPRKLELENAEQYEGK-----NLHYFV-DDLQKFAGRRVAILGGGDSAVDWALMLEPI 176 (332)
T ss_dssp -EEEEEEEECCTTSCCEECCCCCTTGGGGBTT-----TEESSC-SCGGGGBTCEEEEECSSHHHHHHHHHHTTT
T ss_pred -EEeCEEEECCCCCcCCCCCCCCCChhhccCc-----eEEEec-CCHHHcCCCEEEEECCCHhHHHHHHHHHhh
Confidence 999999999999 8999999998753221 111111 11122357889999 78888777654
No 158
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.33 E-value=5.9e-13 Score=146.98 Aligned_cols=191 Identities=16% Similarity=0.197 Sum_probs=104.1
Q ss_pred ccccccccCcchhHHHHHHHHHh-hcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTS-RLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~-~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
.++||+|||||+||+++|.+|++ . +.+|+|||+.... -.+.-.. .||.|. +..|.|.|.++.++........
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~--G~~V~liE~~~~~-~~~~~~~-~GG~c~-~~gciPsk~l~~~a~~~~~~~~-- 74 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLH--KKRVAVIDLQKHH-GPPHYAA-LGGTCV-NVGCVPKKLMVTGANYMDTIRE-- 74 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHH--CCCEEEEESCSSS-BTTTBSC-TTCHHH-HHSHHHHHHHHHHHHHHHHHHH--
T ss_pred ccccEEEECCCHHHHHHHHHHHHHc--CCEEEEEeccccc-ccccCCC-cCcccc-CCCcchhhHHHHHHHHHHHHHH--
Confidence 36899999999999999999999 7 8899999931100 0000000 144433 2233465544433211100000
Q ss_pred cCCCceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc-C-CcEEEeceEEEEEcCCCeEEc-----
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP-S-GATWVKDKIVSFDPENNRVRT----- 616 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~-gv~~~~~~v~~id~~~~~V~~----- 616 (706)
...+.+. .... . ....+..+... ....+.+...+...+. . +|+++.++++.+|+. +|.+
T Consensus 75 -~~~~g~~--------~~~~-~-~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~--~v~v~~~~~ 141 (490)
T 1fec_A 75 -SAGFGWE--------LDRE-S-VRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNH--TVLVRESAD 141 (490)
T ss_dssp -GGGGTEE--------CCGG-G-CEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETT--EEEEESSSS
T ss_pred -HHhcCcc--------cCCc-c-cccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCC--EEEEEeecc
Confidence 0000000 0000 0 00000000000 0000111122233333 5 899999999999864 5555
Q ss_pred CCC---cEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHH
Q psy8791 617 QAG---SEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDL 686 (706)
Q Consensus 617 ~~g---~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~ 686 (706)
.+| +++.||+||||||++|..|++||.+.. .+..........+++++|| |+|+|..|+++
T Consensus 142 ~~g~~~~~~~~d~lviAtGs~p~~p~i~g~~~~----------~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~ 209 (490)
T 1fec_A 142 PNSAVLETLDTEYILLATGSWPQHLGIEGDDLC----------ITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAY 209 (490)
T ss_dssp TTSCEEEEEEEEEEEECCCEEECCCCSBTGGGC----------BCHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred CCCCceEEEEcCEEEEeCCCCCCCCCCCCccce----------ecHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHhh
Confidence 266 689999999999999999999997421 1111112223457899999 89999999877
No 159
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.32 E-value=6.7e-12 Score=139.46 Aligned_cols=157 Identities=15% Similarity=0.130 Sum_probs=101.0
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
.++||+|||||+||+++|..|++. +.+++|||+.. ||.+..... .
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~--G~~v~lie~~~------------GG~~~~~~~-~-------------------- 255 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARK--GIRTGLMGERF------------GGQVLDTVD-I-------------------- 255 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSST------------TGGGTTCSC-B--------------------
T ss_pred CcccEEEECCcHHHHHHHHHHHhC--CCeEEEEECCC------------CCccccccc-c--------------------
Confidence 467999999999999999999997 78999998621 222110000 0
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhc-cCCcEEEec-eEEEEEcC-----CCeEEcCC
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PSGATWVKD-KIVSFDPE-----NNRVRTQA 618 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~~~~~-~v~~id~~-----~~~V~~~~ 618 (706)
+. + +..+ .....++...+...+ +.|++++.+ +|++++++ ..+|.+.+
T Consensus 256 ---------------~~---~---~~~~-----~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~ 309 (521)
T 1hyu_A 256 ---------------EN---Y---ISVP-----KTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETAS 309 (521)
T ss_dssp ---------------CC---B---TTBS-----SBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETT
T ss_pred ---------------cc---c---CCCC-----CCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECC
Confidence 00 0 0000 001112222233333 368999877 89999874 34678888
Q ss_pred CcEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 619 GSEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 619 g~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
|+++.||+||+|||++|..|++||.+++... ..............+++|+|| |+|+|..|++...
T Consensus 310 g~~~~~d~vVlAtG~~~~~~~ipG~~~~~~~-----~v~~~~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~ 379 (521)
T 1hyu_A 310 GAVLKARSIIIATGAKWRNMNVPGEDQYRTK-----GVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVE 379 (521)
T ss_dssp SCEEEEEEEEECCCEEECCCCCTTTTTTTTT-----TEECCTTCCGGGGBTSEEEEECCSHHHHHHHHHHHHHBS
T ss_pred CCEEEcCEEEECCCCCcCCCCCCChhhhcCc-----eEEEeecCchhhcCCCeEEEECCCHHHHHHHHHHHhhCC
Confidence 9899999999999999999999997643221 111111111223467899999 8999998887653
No 160
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.32 E-value=4.1e-13 Score=147.45 Aligned_cols=185 Identities=14% Similarity=0.076 Sum_probs=105.9
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
+++||+|||||+||+++|..|++. +.+|+|||++. . ||.|. +..+.|.+.++.....|.... ..
T Consensus 2 ~~~dvvIIGaG~aGl~aA~~l~~~--G~~V~liE~~~-~----------gG~~~-~~g~~psk~ll~~~~~~~~~~--~~ 65 (464)
T 2a8x_A 2 THYDVVVLGAGPGGYVAAIRAAQL--GLSTAIVEPKY-W----------GGVCL-NVGCIPSKALLRNAELVHIFT--KD 65 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSC-T----------THHHH-HHSHHHHHHHHHHHHHHHHHH--HH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCC-C----------CCccc-ccCchhhHHHHHHHHHHHHHH--HH
Confidence 357999999999999999999998 78999999862 1 23332 222345554443322221110 00
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCC--cE
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAG--SE 621 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g--~~ 621 (706)
...+.+ ..... ..+...... ....+.+...+...+. .+++++.+++..+|.+..+|.+.+| ++
T Consensus 66 ~~~~g~---------~~~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~ 132 (464)
T 2a8x_A 66 AKAFGI---------SGEVT----FDYGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTES 132 (464)
T ss_dssp TTTTTE---------EECCE----ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEE
T ss_pred HHhcCC---------CCCCc----cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEE
Confidence 000110 00000 000000000 0000111111222222 6899988887777665556666777 68
Q ss_pred EeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 622 ISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 622 i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+.||+||+|||++|..|+++|.+.. ..+..........+++++|| |+|+|..|+++..
T Consensus 133 ~~~d~lViAtG~~~~~~~~~g~~~~---------~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~ 195 (464)
T 2a8x_A 133 VTFDNAIIATGSSTRLVPGTSLSAN---------VVTYEEQILSRELPKSIIIAGAGAIGMEFGYVLKNYGV 195 (464)
T ss_dssp EEEEEEEECCCEEECCCTTCCCBTT---------EECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEcCEEEECCCCCCCCCCCCCCCce---------EEecHHHhhccccCCeEEEECCcHHHHHHHHHHHHcCC
Confidence 9999999999999999999886521 11111122223357899999 8999999887653
No 161
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.32 E-value=1.8e-12 Score=145.04 Aligned_cols=97 Identities=11% Similarity=0.120 Sum_probs=67.2
Q ss_pred cEE-EeceEEEEEcCC----CeEEcCCCcEEeeCEEEEecC--cccCccCCCCchhhhcccccccccccCccc-hhhhcc
Q psy8791 597 ATW-VKDKIVSFDPEN----NRVRTQAGSEISYEYMIVASG--IQMYYDRVKGGTTSLEDRGKMRGVSDGFST-VTWEQK 668 (706)
Q Consensus 597 v~~-~~~~v~~id~~~----~~V~~~~g~~i~yd~lViAtG--s~~~~p~i~G~~~~~~~~~~~~~~~~~~~~-~~~~~~ 668 (706)
+++ ++.+|++++.+. .+|++++|+++.||+||+||| +.|..|++||++.+.+. .+++..+. ...+..
T Consensus 111 ~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i~G~~~f~G~-----~~hs~~~~~~~~~~~ 185 (542)
T 1w4x_A 111 SGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKDFAGN-----LYHTGNWPHEPVDFS 185 (542)
T ss_dssp GGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCCTTGGGCCSE-----EEEGGGCCSSCCCCB
T ss_pred ceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCc-----eEECCCCCCchhccC
Confidence 444 467888887643 267778888999999999999 57888999998643221 12222222 123346
Q ss_pred CccEEEE-----cHHHHHHHHHHHhh--hhhhhcccc
Q psy8791 669 HKQYQLV-----SPEIRAKAYDLTKR--KMKKEAQWI 698 (706)
Q Consensus 669 ~k~vvVi-----G~E~A~~l~~~~~~--~~~~~~~~~ 698 (706)
+|+|+|| |+|+|..+++.+.+ .+.+...|+
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~ 222 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFA 222 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCE
T ss_pred CCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCccc
Confidence 8999999 79999999887654 355666664
No 162
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.32 E-value=3e-12 Score=140.21 Aligned_cols=90 Identities=16% Similarity=0.221 Sum_probs=62.2
Q ss_pred CCcE--E-EeceEEEEEcCCC----eEEcCC---C--cEEeeCEEEEecC--cccCccCCCCchhhhcccccccccccCc
Q psy8791 595 SGAT--W-VKDKIVSFDPENN----RVRTQA---G--SEISYEYMIVASG--IQMYYDRVKGGTTSLEDRGKMRGVSDGF 660 (706)
Q Consensus 595 ~gv~--~-~~~~v~~id~~~~----~V~~~~---g--~~i~yd~lViAtG--s~~~~p~i~G~~~~~~~~~~~~~~~~~~ 660 (706)
.+++ + ++++|+.|+++.. +|++.+ | .++.||+||+||| +.|+.|++||++.+.+.......+.
T Consensus 114 ~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~--- 190 (464)
T 2xve_A 114 AGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFR--- 190 (464)
T ss_dssp HTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCC---
T ss_pred cCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCCCCCCccCCCCCcccCCceEEehhhhC---
Confidence 3665 4 5678999987655 666654 4 5789999999999 8999999999874322211111111
Q ss_pred cchhhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 661 STVTWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 661 ~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
......+|+|+|| |+|+|.+|++.+++
T Consensus 191 --~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~ 222 (464)
T 2xve_A 191 --DALEFKDKTVLLVGSSYSAEDIGSQCYKYGAK 222 (464)
T ss_dssp --CGGGGTTSEEEEECCSTTHHHHHHHHHHTTCS
T ss_pred --CHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCe
Confidence 1112367899999 99999999887654
No 163
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.32 E-value=1.4e-13 Score=150.93 Aligned_cols=183 Identities=16% Similarity=0.174 Sum_probs=104.1
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFDS 547 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 547 (706)
+||+|||||+||+++|.+|++. +.+|+|||+++.. ||.|. +..+.|.|.++.....+..... .
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~----------GG~~~-~~g~~p~k~l~~~~~~~~~~~~----~ 64 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQL--GMKVGVVEKEKAL----------GGTCL-RVGCIPSKALLETTERIYEAKK----G 64 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSS----------SHHHH-HHSHHHHHHHHHHHHHHHHHHH----C
T ss_pred CCEEEECCChhHHHHHHHHHHC--CCeEEEEeCCCCC----------CCccc-eecchhHHHHHHHHHHHHHHhh----h
Confidence 6899999999999999999998 7899999987543 33322 2223455554443221111000 0
Q ss_pred CceEEEeeecceecCCCcccccCccccccccc-ccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCcEEeeC
Q psy8791 548 SYTFTILILHSIVEPTDDHYYQPMFTLIGGGM-KKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGSEISYE 625 (706)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~~i~yd 625 (706)
.+.+. .. ... ..+..+.... ...+.+...+...+. .+++++.+++..+|++...|.+ +|+++.||
T Consensus 65 ~~g~~-------~~-~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~-~g~~~~~d 131 (455)
T 2yqu_A 65 LLGAK-------VK-GVE----LDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEE-TGEELEAR 131 (455)
T ss_dssp CTTEE-------EC-CEE----ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETT-TCCEEEEE
T ss_pred cCCcc-------cC-CCc----cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEee-CCEEEEec
Confidence 11110 00 000 0000000000 000111111222333 5899999988887664334444 67889999
Q ss_pred EEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 626 YMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 626 ~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+||||||++|..|+++|.+. .. ..+..........+++++|| |+|+|..|+++..
T Consensus 132 ~lviAtG~~p~~~~~~g~~~--~~------v~~~~~~~~~~~~~~~vvIiGgG~~g~e~A~~l~~~g~ 191 (455)
T 2yqu_A 132 YILIATGSAPLIPPWAQVDY--ER------VVTSTEALSFPEVPKRLIVVGGGVIGLELGVVWHRLGA 191 (455)
T ss_dssp EEEECCCEEECCCTTBCCCS--SS------EECHHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCCCCCCCCCCc--Cc------EechHHhhccccCCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 99999999999999888652 11 11111112223357899999 8999998877653
No 164
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.31 E-value=1.6e-13 Score=151.41 Aligned_cols=194 Identities=14% Similarity=0.091 Sum_probs=110.3
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
..+||+|||||+||+++|..|++. +.+|+|||+++...- ....||.|. +..+.|.+.++.....+..... .
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~--G~~V~liEk~~~~gG----~~~~GG~~~-~~gciPsk~l~~~~~~~~~~~~--~ 72 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQL--GLKTALIEKYKGKEG----KTALGGTCL-NVGCIPSKALLDSSYKFHEAHE--S 72 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH--TCCEEEEECCBCTTS----SBCCSHHHH-HHSHHHHHHHHHHHHHHHHHHT--T
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC--CCEEEEEeCCCccCC----CCCcCCccc-cccHHHHHHHHHHHHHHHHHHH--H
Confidence 358999999999999999999998 889999999763221 111244432 3334565554443321111000 0
Q ss_pred CCCceEEEeeecceecCCCcccccCccccccccc-ccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCC--cE
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGM-KKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAG--SE 621 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g--~~ 621 (706)
...+.+. ..... ..+....... ...+.+...+...+. .+++++.+++..+|+....|.+.+| ++
T Consensus 73 ~~~~g~~--------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~ 140 (476)
T 3lad_A 73 FKLHGIS--------TGEVA----IDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQV 140 (476)
T ss_dssp SGGGTEE--------CSCCE----ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEE
T ss_pred HHhcCcc--------cCCCc----cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEE
Confidence 0000000 00000 0000000000 000111112222232 5899999999999888777887777 57
Q ss_pred EeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 622 ISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 622 i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
+.||+||||||++|..|+.++.+. . ...+..........+++++|| |+|+|..++++..
T Consensus 141 ~~~d~lvlAtG~~p~~~~~~~~~~--~------~v~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~ 204 (476)
T 3lad_A 141 LDTENVILASGSKPVEIPPAPVDQ--D------VIVDSTGALDFQNVPGKLGVIGAGVIGLELGSVWARLGA 204 (476)
T ss_dssp ECCSCEEECCCEEECCCTTSCCCS--S------SEEEHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEcCEEEEcCCCCCCCCCCCCCCc--c------cEEechhhhccccCCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 999999999999998766555331 1 112222222333467899999 8999998877653
No 165
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.29 E-value=3.4e-12 Score=133.78 Aligned_cols=160 Identities=18% Similarity=0.212 Sum_probs=97.1
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
.++||+|||||+||+++|..|++. +.+|+|||+++.+. |.+... .|.+.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~~g----------g~~~~~---~~~~~~--------------- 53 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMR--GLSFRFVDPLPEPG----------GQLTAL---YPEKYI--------------- 53 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSSC----------HHHHHT---CTTSEE---------------
T ss_pred CcCcEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCCCCC----------Ceeecc---CCCcee---------------
Confidence 468999999999999999999987 78999999976542 211100 110000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhc-cCCcEE-EeceEEEEEcCCC--eEEcCCCcE
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PSGATW-VKDKIVSFDPENN--RVRTQAGSE 621 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~~-~~~~v~~id~~~~--~V~~~~g~~ 621 (706)
+..+.++.+ ...++...+.+.. +.++++ ++.+|+.++.+.. +|.+.+|++
T Consensus 54 ---------------------~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~ 107 (335)
T 2zbw_A 54 ---------------------YDVAGFPKV-----YAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNA 107 (335)
T ss_dssp ---------------------CCSTTCSSE-----EHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCE
T ss_pred ---------------------eccCCCCCC-----CHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCE
Confidence 000000000 0111222222222 246777 5678999987653 466778888
Q ss_pred EeeCEEEEecCc---ccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHH
Q psy8791 622 ISYEYMIVASGI---QMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLT 687 (706)
Q Consensus 622 i~yd~lViAtGs---~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~ 687 (706)
+.||+||+|||+ .|..|++||.+..... .....+... ....+++|+|| |+|+|..|.+..
T Consensus 108 ~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~-----~~~~~~~~~-~~~~~~~v~viG~G~~g~e~a~~l~~~g 175 (335)
T 2zbw_A 108 YTAKAVIIAAGVGAFEPRRIGAPGEREFEGR-----GVYYAVKSK-AEFQGKRVLIVGGGDSAVDWALNLLDTA 175 (335)
T ss_dssp EEEEEEEECCTTSEEEECCCCCTTTTTTBTT-----TEESSCSCG-GGGTTCEEEEECSSHHHHHHHHHTTTTS
T ss_pred EEeCEEEECCCCCCCCCCCCCCCChhhccCc-----EEEEecCch-hhcCCCEEEEECCCHHHHHHHHHHHhhC
Confidence 999999999999 5777788887542211 111111111 12257889999 788888876543
No 166
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.29 E-value=6.7e-13 Score=146.44 Aligned_cols=185 Identities=16% Similarity=0.178 Sum_probs=102.9
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
.++||+|||||+||+++|..|++. +.+|+|||+++.. ||.|. +..+.|.+.++.....+......
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~--G~~V~liE~~~~~----------GG~~~-~~g~~psk~ll~~~~~~~~~~~~-- 69 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADE--GLKVAIVERYKTL----------GGVCL-NVGCIPSKALLHNAAVIDEVRHL-- 69 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSCS----------SHHHH-HHSHHHHHHHHHHHHHHHHHHHG--
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCCC----------CCcee-eecccchHHHHHHHHHHHHHHHH--
Confidence 468999999999999999999997 7899999986543 23222 22344555544432222111000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCC----
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAG---- 619 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g---- 619 (706)
..+.+. ... . ...+..+... ....+.+...+...+. .|++++.+++..++.....|.+.+|
T Consensus 70 -~~~gi~-------~~~-~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~ 136 (482)
T 1ojt_A 70 -AANGIK-------YPE-P----ELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYE 136 (482)
T ss_dssp -GGGTCC-------CCC-C----CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETT
T ss_pred -HhCCcc-------cCC-C----ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccc
Confidence 000000 000 0 0000000000 0000111111222223 6899998888777764334444455
Q ss_pred --------cEEeeCEEEEecCcccCccC-CCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHH
Q psy8791 620 --------SEISYEYMIVASGIQMYYDR-VKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYD 685 (706)
Q Consensus 620 --------~~i~yd~lViAtGs~~~~p~-i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~ 685 (706)
.++.||+||+|||++|..|+ +| .+. . ..+..........+++++|| |+|+|..|++
T Consensus 137 ~~~~~g~~~~i~ad~lViAtGs~p~~~~~i~-~~~---~------v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~ 206 (482)
T 1ojt_A 137 QAAPTGEKKIVAFKNCIIAAGSRVTKLPFIP-EDP---R------IIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYST 206 (482)
T ss_dssp EEEEEEEEEEEEEEEEEECCCEEECCCSSCC-CCT---T------EECHHHHTTCCCCCSEEEEESCSHHHHHHHHHHHH
T ss_pred cccccCcceEEEcCEEEECCCCCCCCCCCCC-ccC---c------EEcHHHHhcccccCCeEEEECCCHHHHHHHHHHHH
Confidence 67999999999999998876 55 221 1 11111112223357899999 9999999987
Q ss_pred HHh
Q psy8791 686 LTK 688 (706)
Q Consensus 686 ~~~ 688 (706)
+..
T Consensus 207 ~G~ 209 (482)
T 1ojt_A 207 LGS 209 (482)
T ss_dssp HTC
T ss_pred cCC
Confidence 754
No 167
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.29 E-value=2e-13 Score=151.16 Aligned_cols=178 Identities=16% Similarity=0.188 Sum_probs=92.8
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccc-ccccc
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKD-KIVSF 545 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~ 545 (706)
++||+|||||+||+++|.+|++. +.+|+|||+++. ||.|.. ..+.|.|.++.+....... ....+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~--g~~V~liE~~~~-----------GG~c~~-~gc~P~k~l~~~a~~~~~~~~~~~~ 67 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARH--NAKVALVEKSRL-----------GGTCVN-VGCVPKKIMFNAASVHDILENSRHY 67 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT--TCCEEEEESSST-----------THHHHH-TSHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred ccCEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCCc-----------Cccccc-cCCcchHHHHHHHHHHHHHHhhHhc
Confidence 37999999999999999999997 889999998641 333322 2223443332221000000 00000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCC-----
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQA----- 618 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~----- 618 (706)
.+ .... ...++.+... ....+.+...+...+. .+++++.++++.+|+ ++|.+.+
T Consensus 68 ----g~---------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~--~~v~v~~~~~~~ 128 (500)
T 1onf_A 68 ----GF---------DTKF----SFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSE--NRILIKGTKDNN 128 (500)
T ss_dssp ----TC---------CCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC----------------
T ss_pred ----CC---------ccCC----ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeC--CEEEEEeccccc
Confidence 00 0000 0000000000 0001111122223333 689999998888775 3555533
Q ss_pred --------CcEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHH
Q psy8791 619 --------GSEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYD 685 (706)
Q Consensus 619 --------g~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~ 685 (706)
++++.||+||||||++|..|++||.+... +......... +++++|| |+|+|..|++
T Consensus 129 ~~~~~~~~~~~~~~d~lViAtGs~p~~p~i~G~~~~~----------~~~~~~~~~~-~~~vvViGgG~ig~E~A~~l~~ 197 (500)
T 1onf_A 129 NKDNGPLNEEILEGRNILIAVGNKPVFPPVKGIENTI----------SSDEFFNIKE-SKKIGIVGSGYIAVELINVIKR 197 (500)
T ss_dssp ------------CBSSEEECCCCCBCCCSCTTGGGCE----------EHHHHTTCCC-CSEEEEECCSHHHHHHHHHHHT
T ss_pred cccccCCCceEEEeCEEEECCCCCCCCCCCCCCCccc----------CHHHHhccCC-CCeEEEECChHHHHHHHHHHHH
Confidence 66899999999999999999999974211 1011111222 7899999 8999999877
Q ss_pred HHh
Q psy8791 686 LTK 688 (706)
Q Consensus 686 ~~~ 688 (706)
+..
T Consensus 198 ~g~ 200 (500)
T 1onf_A 198 LGI 200 (500)
T ss_dssp TTC
T ss_pred cCC
Confidence 653
No 168
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.29 E-value=3e-12 Score=134.09 Aligned_cols=167 Identities=17% Similarity=0.082 Sum_probs=98.7
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
+.++||+|||||++|+++|..|++. +.+|+|||+...... ..||.+.....
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~--g~~v~lie~~~~~~~------~~gg~~~~~~~--------------------- 56 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARA--ELKPLLFEGWMANDI------APGGQLTTTTD--------------------- 56 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT--TCCCEEECCSSBTTB------CTTCGGGGCSE---------------------
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC--CCeEEEEeccCcccc------CCCceeeeccc---------------------
Confidence 3467999999999999999999987 789999997211000 01121110000
Q ss_pred cCCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEEeceEEEEEcCCC--eEEcCCCcE
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENN--RVRTQAGSE 621 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~--~V~~~~g~~ 621 (706)
+. ..+.++. . ....++...+.+.+. .+++++.++|+.++.+.+ +|++ ++++
T Consensus 57 ---------------~~------~~~~~~~---~-~~~~~~~~~l~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~-~~~~ 110 (333)
T 1vdc_A 57 ---------------VE------NFPGFPE---G-ILGVELTDKFRKQSERFGTTIFTETVTKVDFSSKPFKLFT-DSKA 110 (333)
T ss_dssp ---------------EC------CSTTCTT---C-EEHHHHHHHHHHHHHHTTCEEECCCCCEEECSSSSEEEEC-SSEE
T ss_pred ---------------cc------cCCCCcc---C-CCHHHHHHHHHHHHHHCCCEEEEeEEEEEEEcCCEEEEEE-CCcE
Confidence 00 0000000 0 001122222223222 689998888999998766 5666 7788
Q ss_pred EeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhh--ccCccEEEE-----cHHHHHHHHHHH
Q psy8791 622 ISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWE--QKHKQYQLV-----SPEIRAKAYDLT 687 (706)
Q Consensus 622 i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~k~vvVi-----G~E~A~~l~~~~ 687 (706)
+.||+||+|||++|..|++||.+.. ......+............ ..+++|+|| |+|+|..|.++.
T Consensus 111 ~~~~~vv~A~G~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g 182 (333)
T 1vdc_A 111 ILADAVILAIGAVAKRLSFVGSGEV-LGGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYG 182 (333)
T ss_dssp EEEEEEEECCCEEECCCCCBTCSSS-SSCCBTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTS
T ss_pred EEcCEEEECCCCCcCCCCCCCcccc-ccccccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcC
Confidence 9999999999999999999997641 0000001111111111111 457889999 888888876543
No 169
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.29 E-value=1.2e-12 Score=145.63 Aligned_cols=177 Identities=15% Similarity=0.101 Sum_probs=105.3
Q ss_pred ccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccc
Q psy8791 464 FRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIV 543 (706)
Q Consensus 464 ~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~ 543 (706)
++.++||||||||+||+++|.+|++. +.+|+|||+++.. ||.|.. ..+.|.+.++.....+.....
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~~~~~----------GG~~~~-~g~~p~k~l~~~~~~~~~~~~- 105 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAM--GGRQLIVDRWPFL----------GGSCPH-NACVPHHLFSDCAAELMLART- 105 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSS----------SCHHHH-HSHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCCCC----------CCcccc-cCcCchHHHHHHHHHHHHHhh-
Confidence 34568999999999999999999998 7899999997642 333322 222444433322211000000
Q ss_pred ccCCCceEEEeeecceecCCCcccccCcccccccccccccccc----cchh---hhc------cCCcEEE-eceEEEEEc
Q psy8791 544 SFDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSR----RPMK---SVL------PSGATWV-KDKIVSFDP 609 (706)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~------~~gv~~~-~~~v~~id~ 609 (706)
.. . +. .++.........+++. ..+. ..+ ..+++++ .++++++|+
T Consensus 106 ------------------~~-~--~g-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~ 163 (523)
T 1mo9_A 106 ------------------FS-G--QY-WFPDMTEKVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN 163 (523)
T ss_dssp ------------------TT-T--ST-TCCCCTTCCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET
T ss_pred ------------------hh-h--cC-cHHHHHhhhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC
Confidence 00 0 00 0000000000011111 1111 233 3689997 999999986
Q ss_pred CCCeEEcCCCcEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccch-hhhccC-ccEEEE-----cHHHHHH
Q psy8791 610 ENNRVRTQAGSEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTV-TWEQKH-KQYQLV-----SPEIRAK 682 (706)
Q Consensus 610 ~~~~V~~~~g~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~-k~vvVi-----G~E~A~~ 682 (706)
++|.+. ++++.||+||||||++|..|++||.+. ..+ .+..... .....+ ++++|| |+|+|..
T Consensus 164 --~~v~~~-g~~~~~d~lViATGs~p~~p~i~G~~~--~~v------~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~ 232 (523)
T 1mo9_A 164 --HTVEAA-GKVFKAKNLILAVGAGPGTLDVPGVNA--KGV------FDHATLVEELDYEPGSTVVVVGGSKTAVEYGCF 232 (523)
T ss_dssp --TEEEET-TEEEEBSCEEECCCEECCCCCSTTTTS--BTE------EEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHH
T ss_pred --CEEEEC-CEEEEeCEEEECCCCCCCCCCCCCccc--CcE------eeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHH
Confidence 467765 778999999999999999999999763 111 1111122 222345 899999 8999998
Q ss_pred HHHHH
Q psy8791 683 AYDLT 687 (706)
Q Consensus 683 l~~~~ 687 (706)
++++.
T Consensus 233 l~~~G 237 (523)
T 1mo9_A 233 FNATG 237 (523)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 87765
No 170
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.28 E-value=1.4e-12 Score=143.96 Aligned_cols=180 Identities=19% Similarity=0.194 Sum_probs=104.5
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccc-ccccc
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKD-KIVSF 545 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~ 545 (706)
++||+|||||+||+++|..|+++ +.+|+|||++. . ||.|. +..+.|.+.++......... ....+
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~--G~~V~liEk~~-~----------GG~~~-~~gcip~k~l~~~a~~~~~~~~~~~~ 91 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGAL--GKRVAIAEEYR-I----------GGTCV-IRGCVPKKLYFYASQYAQEFSKSIGF 91 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSC-T----------THHHH-HHSHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHhC--cCEEEEEeCCC-C----------CCcee-ccCccccHHHHHHHHHHHHHHHHHhC
Confidence 57999999999999999999998 88999999832 1 33332 22334554444332111100 00000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcC-CCcEE
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQ-AGSEI 622 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~-~g~~i 622 (706)
+ +.. .... ..+..+... ....+.+...+...+. .+++++.+++..+++. ++.+. +++++
T Consensus 92 g--~~~----------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~--~v~v~~~~~~~ 153 (484)
T 3o0h_A 92 G--WKY----------ADPI----FNWEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEH--TLELSVTGERI 153 (484)
T ss_dssp T--BCC----------CCCE----ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETT--EEEETTTCCEE
T ss_pred C--ccc----------CCCc----cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCC--EEEEecCCeEE
Confidence 0 000 0000 000000000 0001111122222233 6899999999999864 67766 77899
Q ss_pred eeCEEEEecCcccC-ccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 623 SYEYMIVASGIQMY-YDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 623 ~yd~lViAtGs~~~-~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
.||+||||||++|. .|++||.+.. .+..........+++++|| |+|+|..++++..
T Consensus 154 ~~d~lviAtG~~p~~~p~i~G~~~~----------~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~ 215 (484)
T 3o0h_A 154 SAEKILIATGAKIVSNSAIKGSDLC----------LTSNEIFDLEKLPKSIVIVGGGYIGVEFANIFHGLGV 215 (484)
T ss_dssp EEEEEEECCCEEECCC--CBTGGGS----------BCTTTGGGCSSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EeCEEEEccCCCcccCCCCCCcccc----------ccHHHHHhHHhcCCcEEEECcCHHHHHHHHHHHHcCC
Confidence 99999999999999 8999997521 1222222333468899999 7899988877643
No 171
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.27 E-value=6.2e-12 Score=133.25 Aligned_cols=162 Identities=16% Similarity=0.138 Sum_probs=96.9
Q ss_pred ccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccc
Q psy8791 464 FRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIV 543 (706)
Q Consensus 464 ~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~ 543 (706)
++.++||+|||||+||+++|..|++. +.+|+|||+++... |.+... .|.+.
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~~g----------g~~~~~---~~~~~-------------- 61 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMN--NISCRIIESMPQLG----------GQLAAL---YPEKH-------------- 61 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSC----------HHHHHT---CTTSE--------------
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhC--CCCEEEEecCCCCC----------Cccccc---CCCcc--------------
Confidence 44568999999999999999999987 78999999876532 221100 01000
Q ss_pred ccCCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhc-cCCcEEE-eceEEEEEcCCC---eEEcCC
Q psy8791 544 SFDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PSGATWV-KDKIVSFDPENN---RVRTQA 618 (706)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~~~-~~~v~~id~~~~---~V~~~~ 618 (706)
.+..+.++. ....++...+.+.+ ..+++++ +.+|+.++++.. +|.+.+
T Consensus 62 ----------------------~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~ 114 (360)
T 3ab1_A 62 ----------------------IYDVAGFPE-----VPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNT 114 (360)
T ss_dssp ----------------------ECCSTTCSS-----EEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETT
T ss_pred ----------------------cccCCCCCC-----CCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECC
Confidence 000000000 00111222222222 2478874 568999998654 677888
Q ss_pred CcEEeeCEEEEecCc---ccCccCCCC-chhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHH
Q psy8791 619 GSEISYEYMIVASGI---QMYYDRVKG-GTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLT 687 (706)
Q Consensus 619 g~~i~yd~lViAtGs---~~~~p~i~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~ 687 (706)
|+++.||+||+|||+ .|..|++|| .++.... .....+.. .....+++|+|| |+|+|..|.+..
T Consensus 115 g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~-----~v~~~~~~-~~~~~~~~vvVvG~G~~g~e~A~~l~~~g 186 (360)
T 3ab1_A 115 GNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGS-----SVYYAVKS-VEDFKGKRVVIVGGGDSALDWTVGLIKNA 186 (360)
T ss_dssp SCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTT-----TEESSCSC-GGGGTTCEEEEECSSHHHHHHHHHTTTTS
T ss_pred CcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCc-----eEEEecCC-HHHcCCCcEEEECCCHHHHHHHHHHHhcC
Confidence 889999999999999 566677888 5432211 11111111 112357889999 788888776543
No 172
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.27 E-value=5.8e-13 Score=147.12 Aligned_cols=183 Identities=9% Similarity=0.068 Sum_probs=106.7
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
++||+|||||+||+++|.+|++. +.+|+|||+++ .||.|. +..|.|.|.++.+...+..... .
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~--G~~V~liE~~~-----------~GGtc~-~~gciPsk~l~~~a~~~~~~~~---~ 70 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKH--TDKVVLIEGGA-----------YGTTCA-RVGCMPSKLLIAAADASYHASQ---T 70 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT--CSCEEEEESSC-----------SSCHHH-HHSHHHHHHHHHHHHHHHHHTC---G
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--CCcEEEEeCCC-----------CCCccc-ccChhcCHHHHHHHHHHHHHhh---h
Confidence 48999999999999999999998 88999999854 144432 3445676666554422111100 0
Q ss_pred CCceEEEeeecceecCCCcccccCcccccccccc-cccccccchhhhc-c-CCcEEEeceEEEEEcCCCeEEcCCCcEEe
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMK-KLSDSRRPMKSVL-P-SGATWVKDKIVSFDPENNRVRTQAGSEIS 623 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~-~gv~~~~~~v~~id~~~~~V~~~~g~~i~ 623 (706)
+.+.+. .... ...+..+..... ..+.....+.... . .+++++.+++.+++. ++|.+.+++++.
T Consensus 71 ~~~g~~---------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~--~~v~~~~~~~~~ 136 (492)
T 3ic9_A 71 DLFGIQ---------VDRI---SVNGKAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDE--HTLQVDDHSQVI 136 (492)
T ss_dssp GGGTEE---------CSEE---EECHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEET--TEEEETTTEEEE
T ss_pred hhcCcC---------CCCC---ccCHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecC--CEEEEcCCcEEE
Confidence 000000 0000 000000000000 0000101111111 1 256788999888875 478888888999
Q ss_pred eCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 624 YEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 624 yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
||+||||||++|..|+++|... . ...+..........+++++|| |+|+|..|+++..
T Consensus 137 ~d~lViATGs~p~~p~~~~~~~--~------~v~t~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~ 198 (492)
T 3ic9_A 137 AKRIVIATGSRPNYPEFLAAAG--S------RLLTNDNLFELNDLPKSVAVFGPGVIGLELGQALSRLGV 198 (492)
T ss_dssp EEEEEECCCEECCCCHHHHTTG--G------GEECHHHHTTCSSCCSEEEEESSCHHHHHHHHHHHHTTC
T ss_pred eCEEEEccCCCCcCCCCCCccC--C------cEEcHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 9999999999999887665321 1 122222233334468999999 8999999987654
No 173
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.26 E-value=6.1e-13 Score=146.03 Aligned_cols=181 Identities=15% Similarity=0.141 Sum_probs=105.2
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
++||+|||||++|+++|..|++. +.+|+|||++. .||.|. +..+.|.+.++.....+.... ..
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~--G~~V~liEk~~-----------~GG~~~-~~gcip~k~l~~~~~~~~~~~---~~ 67 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAAL--GKKVAIAEEFR-----------YGGTCV-IRGCVPKKLYVYASQFAEHFE---DA 67 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT--TCCEEEEESSC-----------TTHHHH-HHSHHHHHHHHHHHHHHHHHH---HG
T ss_pred CCcEEEECcCHHHHHHHHHHHhC--CCEEEEEeCCC-----------CCCccc-ccCchhhHHHHHHHHHHHHHH---HH
Confidence 58999999999999999999998 88999999832 133332 223345444333321111000 00
Q ss_pred CCceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEc-CCCcEEe
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRT-QAGSEIS 623 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~-~~g~~i~ 623 (706)
+.+.+. ..... ..+..+... ....+.+...+...+. .+++++.+++..+++ ++|.+ .+++++.
T Consensus 68 ~~~g~~--------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~--~~v~~~~~~~~~~ 133 (463)
T 4dna_A 68 AGFGWT--------VGESR----FDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGP--NTVKLLASGKTVT 133 (463)
T ss_dssp GGGTEE--------ECCCE----ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSS--SEEEETTTTEEEE
T ss_pred HhcCcc--------cCCCC----cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeC--CEEEEecCCeEEE
Confidence 001110 00000 000000000 0001111112222222 589999999998875 47777 5778999
Q ss_pred eCEEEEecCcccC-ccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 624 YEYMIVASGIQMY-YDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 624 yd~lViAtGs~~~-~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
||+||||||++|. .|++||.+.. .+..........+++++|| |+|+|..++++..
T Consensus 134 ~d~lviAtG~~p~~~p~i~G~~~~----------~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~ 194 (463)
T 4dna_A 134 AERIVIAVGGHPSPHDALPGHELC----------ITSNEAFDLPALPESILIAGGGYIAVEFANIFHGLGV 194 (463)
T ss_dssp EEEEEECCCEEECCCTTSTTGGGC----------BCHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred eCEEEEecCCCcccCCCCCCcccc----------ccHHHHhhhhcCCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 9999999999999 9999997621 1111122223457899999 8899998877643
No 174
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.25 E-value=1.5e-12 Score=147.62 Aligned_cols=86 Identities=14% Similarity=0.109 Sum_probs=64.1
Q ss_pred CCcEEEeceEEEEEcCCCeEEcCCC--cEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccE
Q psy8791 595 SGATWVKDKIVSFDPENNRVRTQAG--SEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQY 672 (706)
Q Consensus 595 ~gv~~~~~~v~~id~~~~~V~~~~g--~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v 672 (706)
.+|+++.+.+..+++....+...+| +++.||+||||||++|+.|++||.++..- +..........++++
T Consensus 219 ~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~p~~p~i~G~~~~~~---------~~~~~~~~~~~~~~v 289 (598)
T 2x8g_A 219 NQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYPEIPGAVEYGI---------TSDDLFSLPYFPGKT 289 (598)
T ss_dssp TTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEEECCCEEECCCSSTTHHHHCE---------EHHHHTTCSSCCCSE
T ss_pred CCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCCCCCCCCCCcccceE---------cHHHHhhCccCCCEE
Confidence 5899999999999987656666667 47999999999999999999999754211 111111222357889
Q ss_pred EEE-----cHHHHHHHHHHHhh
Q psy8791 673 QLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 673 vVi-----G~E~A~~l~~~~~~ 689 (706)
+|| |+|+|..|+++..+
T Consensus 290 vViGgG~~g~E~A~~l~~~g~~ 311 (598)
T 2x8g_A 290 LVIGASYVALECAGFLASLGGD 311 (598)
T ss_dssp EEECCSHHHHHHHHHHHHTTCC
T ss_pred EEECCCHHHHHHHHHHHHcCCE
Confidence 999 89999999887643
No 175
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.25 E-value=2.1e-12 Score=142.41 Aligned_cols=189 Identities=15% Similarity=0.167 Sum_probs=104.0
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
+.++||+|||||+||+++|..|++. +.+|+|||+++.. ||.|. +..+.|.|.++.....|.... .
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~~~~~----------GG~~~-~~g~~psk~l~~~~~~~~~~~--~ 67 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQL--GFNTACVEKRGKL----------GGTCL-NVGCIPSKALLNNSHLFHQMH--T 67 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSS----------SHHHH-HHSHHHHHHHHHHHHHHHHHH--H
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCCc----------CCccc-eeccHHHHHHHHHHHHHHHHH--H
Confidence 4568999999999999999999998 7899999986543 33332 223356555544332221110 0
Q ss_pred cCCCceEEEeeecceecCCCcccccCcccccccc-cccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCC--c
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGG-MKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAG--S 620 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g--~ 620 (706)
....+.+. . ..... ..+..+... ....+.+...+...+. .|++++.+++..+|.+..+|.+.+| +
T Consensus 68 ~~~~~gi~------~-~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~ 136 (478)
T 1v59_A 68 EAQKRGID------V-NGDIK----INVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEG 136 (478)
T ss_dssp TSGGGTEE------E-CSCEE----ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTT
T ss_pred HHHhcCcc------c-CCCCc----cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcc
Confidence 00001110 0 00000 000000000 0000111111222222 6899988887776655445666666 5
Q ss_pred E------EeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHH
Q psy8791 621 E------ISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLT 687 (706)
Q Consensus 621 ~------i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~ 687 (706)
+ +.||+||+|||++|. .+||.+ ... . ...+..........+++++|| |+|+|..|+++.
T Consensus 137 ~~~~~~~i~~d~lViAtGs~p~--~~~g~~--~~~-~---~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g 206 (478)
T 1v59_A 137 TVKEDHILDVKNIIVATGSEVT--PFPGIE--IDE-E---KIVSSTGALSLKEIPKRLTIIGGGIIGLEMGSVYSRLG 206 (478)
T ss_dssp CCSSCEEEEEEEEEECCCEEEC--CCTTCC--CCS-S---SEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTT
T ss_pred cccccceEEeCEEEECcCCCCC--CCCCCC--CCC-c---eEEcHHHHHhhhccCceEEEECCCHHHHHHHHHHHHcC
Confidence 6 999999999999984 567764 211 1 111211222222357899999 899999988764
No 176
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.24 E-value=8.7e-12 Score=136.19 Aligned_cols=92 Identities=13% Similarity=0.131 Sum_probs=59.9
Q ss_pred CcEE-EeceEEEEEcCCC--eEEcCC---Cc---EEeeCEEEEecCc--ccCccCCCCchhhhccc-ccccccccCccch
Q psy8791 596 GATW-VKDKIVSFDPENN--RVRTQA---GS---EISYEYMIVASGI--QMYYDRVKGGTTSLEDR-GKMRGVSDGFSTV 663 (706)
Q Consensus 596 gv~~-~~~~v~~id~~~~--~V~~~~---g~---~i~yd~lViAtGs--~~~~p~i~G~~~~~~~~-~~~~~~~~~~~~~ 663 (706)
+..+ ++++|+.|+.+.. +|++.+ |+ ++.||+||+|||+ .|+.|++||++++...- ..+ .+...+. .
T Consensus 129 ~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v-~~~~~~~-~ 206 (447)
T 2gv8_A 129 LPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSV-LHSSLFR-E 206 (447)
T ss_dssp GGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSE-EEGGGCC-C
T ss_pred hCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccE-EEecccC-C
Confidence 3444 5778999987655 566554 66 7999999999999 88889999987432110 000 0111111 1
Q ss_pred hhhccCccEEEE-----cHHHHHHHHHHHhh
Q psy8791 664 TWEQKHKQYQLV-----SPEIRAKAYDLTKR 689 (706)
Q Consensus 664 ~~~~~~k~vvVi-----G~E~A~~l~~~~~~ 689 (706)
.....+++|+|| |+|+|.+|++.+++
T Consensus 207 ~~~~~~k~VvVvG~G~sg~e~A~~l~~~~~~ 237 (447)
T 2gv8_A 207 PELFVGESVLVVGGASSANDLVRHLTPVAKH 237 (447)
T ss_dssp GGGGTTCCEEEECSSHHHHHHHHHHTTTSCS
T ss_pred hhhcCCCEEEEEccCcCHHHHHHHHHHHhCC
Confidence 112357899999 89999998877643
No 177
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.16 E-value=3.1e-11 Score=132.49 Aligned_cols=43 Identities=19% Similarity=0.204 Sum_probs=36.4
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCC---CcEEEECCCCCCcCCc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGK---GQVSIVEPTDDHYYQP 508 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~---~~i~vid~~~~~~~~~ 508 (706)
.++||||||||+||+++|..|++..+. .+|+|||+++.+.|.+
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~ 74 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHG 74 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSG
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcC
Confidence 467999999999999999999998322 8999999988766544
No 178
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.16 E-value=6.1e-11 Score=125.92 Aligned_cols=82 Identities=9% Similarity=0.043 Sum_probs=54.6
Q ss_pred CCcEEEe-ceEEEEEcCC--CeEEcCCCcEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCcc
Q psy8791 595 SGATWVK-DKIVSFDPEN--NRVRTQAGSEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQ 671 (706)
Q Consensus 595 ~gv~~~~-~~v~~id~~~--~~V~~~~g~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 671 (706)
.|++++. .+|+.++++. ..|.+.++ ++.||+||+|||+.+. |.+|+ .. .. +...+.. ......++
T Consensus 101 ~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~-p~ip~-~~----~~----~~~~~~~-~~~~~~~~ 168 (369)
T 3d1c_A 101 YELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF-PKKPF-KY----GI----HYSEIED-FDNFNKGQ 168 (369)
T ss_dssp TTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS-BCCCS-SS----CE----EGGGCSC-GGGSCSSE
T ss_pred cCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc-cCCCC-Cc----ee----chhhcCC-hhhcCCCE
Confidence 6888865 4799999864 35666666 7999999999999875 66776 11 00 0011110 11124568
Q ss_pred EEEE-----cHHHHHHHHHHHh
Q psy8791 672 YQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 672 vvVi-----G~E~A~~l~~~~~ 688 (706)
|+|| |+|+|..|.+...
T Consensus 169 vvVvG~G~~g~e~a~~l~~~g~ 190 (369)
T 3d1c_A 169 YVVIGGNESGFDAAYQLAKNGS 190 (369)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC
T ss_pred EEEECCCcCHHHHHHHHHhcCC
Confidence 9999 8999999887653
No 179
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.10 E-value=1.9e-11 Score=133.25 Aligned_cols=150 Identities=13% Similarity=0.140 Sum_probs=91.5
Q ss_pred ccccccccCcchhHHHHHHHHHh-hcC----CCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTS-RLG----KGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKD 540 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~-~~~----~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~ 540 (706)
++++|+|||||+||+++|..|++ ..+ +.+|+|||+.+.++ |.+... ..|
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~g----------g~~~~g--v~p-------------- 55 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPW----------GLVRSG--VAP-------------- 55 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCS----------THHHHT--SCT--------------
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCC----------Cccccc--cCC--------------
Confidence 46799999999999999999998 655 78999999976532 111100 000
Q ss_pred cccccCCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCC
Q psy8791 541 KIVSFDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAG 619 (706)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g 619 (706)
. .....++...+...+. .+++++.+. . + .+.|+++++
T Consensus 56 ----------------------~---------------~~~~~~~~~~~~~~~~~~~v~~~~~v-~-v---~~~v~~~~~ 93 (456)
T 1lqt_A 56 ----------------------D---------------HPKIKSISKQFEKTAEDPRFRFFGNV-V-V---GEHVQPGEL 93 (456)
T ss_dssp ----------------------T---------------CTGGGGGHHHHHHHHTSTTEEEEESC-C-B---TTTBCHHHH
T ss_pred ----------------------C---------------CCCHHHHHHHHHHHHhcCCCEEEeeE-E-E---CCEEEECCC
Confidence 0 0001122222333332 588887652 1 3 245666665
Q ss_pred cEEeeCEEEEecCcc-cCccCCCCchhhhcccccccccccCc----cc-hhh-hccCccEEEE-----cHHHHHHHHHH
Q psy8791 620 SEISYEYMIVASGIQ-MYYDRVKGGTTSLEDRGKMRGVSDGF----ST-VTW-EQKHKQYQLV-----SPEIRAKAYDL 686 (706)
Q Consensus 620 ~~i~yd~lViAtGs~-~~~p~i~G~~~~~~~~~~~~~~~~~~----~~-~~~-~~~~k~vvVi-----G~E~A~~l~~~ 686 (706)
++.||+||||||+. +..|++||.+ +..+...+.+...+ .. ..+ ...+++|+|| |+|+|..|.+.
T Consensus 94 -~~~~d~lViAtG~~~~~~~~ipG~~--~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~ 169 (456)
T 1lqt_A 94 -SERYDAVIYAVGAQSDRMLNIPGED--LPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTD 169 (456)
T ss_dssp -HHHSSEEEECCCCCEECCCCCTTTT--STTEEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSC
T ss_pred -eEeCCEEEEeeCCCCCCCCCCCCCC--CCCcEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhh
Confidence 58999999999997 6888999975 33322222221100 00 111 1257889999 89999998864
No 180
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.09 E-value=7.1e-11 Score=129.45 Aligned_cols=31 Identities=19% Similarity=0.434 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCC
Q psy8791 32 KLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPT 64 (706)
Q Consensus 32 ~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~ 64 (706)
||||||||+||++||..|++. +.+|+|||+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~--G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRA--GKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--TCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCCEEEEeCC
Confidence 699999999999999999998 8999999998
No 181
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.07 E-value=5.6e-11 Score=129.64 Aligned_cols=149 Identities=14% Similarity=0.175 Sum_probs=89.3
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
.+++|+|||||+||+++|..|++..++.+|+|||+++..+ |+.... +.|.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~g----------g~~~~g--~~p~------------------ 54 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPF----------GLVRFG--VAPD------------------ 54 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSC----------THHHHT--SCTT------------------
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCC----------ceeecc--cCCC------------------
Confidence 3568999999999999999999985559999999876542 111000 0000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEEeceEEEEEcCCCeEEcCCCcEEee
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENNRVRTQAGSEISY 624 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~~V~~~~g~~i~y 624 (706)
....+++...+...++ .|++++.+... .+.|++.+. .+.|
T Consensus 55 ---------------------------------~~~~~~~~~~~~~~~~~~gv~~~~~~~v-----~~~V~~~~~-~~~~ 95 (460)
T 1cjc_A 55 ---------------------------------HPEVKNVINTFTQTARSDRCAFYGNVEV-----GRDVTVQEL-QDAY 95 (460)
T ss_dssp ---------------------------------CGGGGGHHHHHHHHHTSTTEEEEBSCCB-----TTTBCHHHH-HHHS
T ss_pred ---------------------------------CccHHHHHHHHHHHHHhCCcEEEeeeEE-----eeEEEeccc-eEEc
Confidence 0001112222333333 58888665322 234555443 5789
Q ss_pred CEEEEecCccc-CccCCCCchhhhcccccccccccCcc----chhh--hccCccEEEE-----cHHHHHHHHH
Q psy8791 625 EYMIVASGIQM-YYDRVKGGTTSLEDRGKMRGVSDGFS----TVTW--EQKHKQYQLV-----SPEIRAKAYD 685 (706)
Q Consensus 625 d~lViAtGs~~-~~p~i~G~~~~~~~~~~~~~~~~~~~----~~~~--~~~~k~vvVi-----G~E~A~~l~~ 685 (706)
|+||||||+.+ +.|++||.+ ...+...+.+...+. ...+ ...+++|+|| |+|+|..|.+
T Consensus 96 d~lVlAtGs~~~~~~~ipG~~--~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~ 166 (460)
T 1cjc_A 96 HAVVLSYGAEDHQALDIPGEE--LPGVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLT 166 (460)
T ss_dssp SEEEECCCCCEECCCCCTTTT--STTEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHS
T ss_pred CEEEEecCcCCCCCCCCCCCC--CCcEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhh
Confidence 99999999995 778999975 222222222211000 0011 1247889999 9999999873
No 182
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.00 E-value=1.2e-10 Score=126.69 Aligned_cols=38 Identities=24% Similarity=0.421 Sum_probs=33.5
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
...++|+|||||+||+++|..|++. +.+|+|||+++..
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~--G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAK--GYEVHVYDRYDRM 157 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHH--TCCEEEECSSSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeccCCC
Confidence 3567999999999999999999998 7899999987643
No 183
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.96 E-value=1.2e-10 Score=133.56 Aligned_cols=140 Identities=17% Similarity=0.201 Sum_probs=86.3
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
.++||+|||||+||+++|..|+++ +.+|+|||+++...+ .+..... .| ..
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~--g~~V~lie~~~~~gg----------~~~~~~~-~~------~~----------- 421 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAAR--GHQVTLFDAHSEIGG----------QFNIAKQ-IP------GK----------- 421 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT--TCEEEEEESSSSSCT----------THHHHTT-ST------TC-----------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCCCCC----------eeecccc-CC------CH-----------
Confidence 467999999999999999999987 789999999776432 1111000 00 00
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhc-cCCcEEEeceEEEEEcCCCeEEcCCCcEE-e
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PSGATWVKDKIVSFDPENNRVRTQAGSEI-S 623 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~~~~~~v~~id~~~~~V~~~~g~~i-~ 623 (706)
....++...+...+ +.|++++.++.+.. ..+ .
T Consensus 422 ----------------------------------~~~~~~~~~~~~~~~~~gv~~~~~~~v~~------------~~~~~ 455 (671)
T 1ps9_A 422 ----------------------------------EEFYETLRYYRRMIEVTGVTLKLNHTVTA------------DQLQA 455 (671)
T ss_dssp ----------------------------------TTHHHHHHHHHHHHHHHTCEEEESCCCCS------------SSSCC
T ss_pred ----------------------------------HHHHHHHHHHHHHHHHcCCEEEeCcEecH------------HHhhc
Confidence 00001111122222 24788866543211 124 8
Q ss_pred eCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhhccCccEEEE-----cHHHHHHHHHHHh
Q psy8791 624 YEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWEQKHKQYQLV-----SPEIRAKAYDLTK 688 (706)
Q Consensus 624 yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVi-----G~E~A~~l~~~~~ 688 (706)
||+||||||++|..|++||.+. ..+......+. .....+++|+|| |+|+|..|+++..
T Consensus 456 ~d~lviAtG~~p~~~~i~G~~~--~~v~~~~~~l~-----~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~ 518 (671)
T 1ps9_A 456 FDETILASGIVPRTPPIDGIDH--PKVLSYLDVLR-----DKAPVGNKVAIIGCGGIGFDTAMYLSQPGE 518 (671)
T ss_dssp SSEEEECCCEEECCCCCBTTTS--TTEEEHHHHHT-----SCCCCCSEEEEECCHHHHHHHHHHHTCCSS
T ss_pred CCEEEEccCCCcCCCCCCCCCC--CcEeeHHHHhh-----CCCCCCCeEEEECCChhHHHHHHHHHhcCC
Confidence 9999999999999999999763 22211111111 112357899999 8999999886653
No 184
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.95 E-value=3.7e-10 Score=134.10 Aligned_cols=156 Identities=12% Similarity=0.064 Sum_probs=92.2
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
.++||||||||+||++||..+++. +.+|+|||+++.. ||.+. + + + +..+.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~--G~~V~lie~~~~~----------GG~~~-~-~--~-k~~i~------------- 176 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRS--GARVMLLDERAEA----------GGTLL-D-T--A-GEQID------------- 176 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSS----------SGGGG-G-S--S-CCEET-------------
T ss_pred cCCCEEEECCCHHHHHHHHHHHhC--CCcEEEEeCCCCC----------Cceec-c-C--C-ccccC-------------
Confidence 467999999999999999999998 7899999987653 22222 1 0 0 00000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccc-hhhhcc-CCcEEEe-ceEEEEEcCCCe---------
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRP-MKSVLP-SGATWVK-DKIVSFDPENNR--------- 613 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~gv~~~~-~~v~~id~~~~~--------- 613 (706)
. . ...+.... ...+.+ .+++++. .+|..++.++..
T Consensus 177 ----------------~----------------~-~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~ 223 (965)
T 2gag_A 177 ----------------G----------------M-DSSAWIEQVTSELAEAEETTHLQRTTVFGSYDANYLIAAQRRTVH 223 (965)
T ss_dssp ----------------T----------------E-EHHHHHHHHHHHHHHSTTEEEESSEEEEEEETTTEEEEEEECSTT
T ss_pred ----------------C----------------C-CHHHHHHHHHHHHhhcCCcEEEeCCEEEeeecCCceeeeEeeccc
Confidence 0 0 00001111 112222 3788764 478888765431
Q ss_pred --EEc------CCCcEEeeCEEEEecCcccCccCCCCchhhhcccccccccccCccchhhh-ccCccEEEE-----cHHH
Q psy8791 614 --VRT------QAGSEISYEYMIVASGIQMYYDRVKGGTTSLEDRGKMRGVSDGFSTVTWE-QKHKQYQLV-----SPEI 679 (706)
Q Consensus 614 --V~~------~~g~~i~yd~lViAtGs~~~~p~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~k~vvVi-----G~E~ 679 (706)
+.+ .++.++.||+||||||++|+.|++||.+ ...+.......+. ...+. ...++++|| |+|+
T Consensus 224 ~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~--~~gv~~~~~~~~~--l~~~~~~~gk~vvViGgG~~g~E~ 299 (965)
T 2gag_A 224 LDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENND--RPGIMLAGAVRSY--LNRYGVRAGARIAVATTNDSAYEL 299 (965)
T ss_dssp CSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCC--STTEEEHHHHHHH--HHTTCEESCSSEEEEESSTTHHHH
T ss_pred ccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCC--CCCEEEhHHHHHH--HHhcCCCCCCeEEEEcCCHHHHHH
Confidence 111 1123689999999999999999999976 2222111111010 00111 234789998 8999
Q ss_pred HHHHHHHHh
Q psy8791 680 RAKAYDLTK 688 (706)
Q Consensus 680 A~~l~~~~~ 688 (706)
|..|.++..
T Consensus 300 A~~L~~~G~ 308 (965)
T 2gag_A 300 VRELAATGG 308 (965)
T ss_dssp HHHHGGGTC
T ss_pred HHHHHHcCC
Confidence 998877653
No 185
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.94 E-value=2.8e-11 Score=126.35 Aligned_cols=72 Identities=10% Similarity=-0.091 Sum_probs=48.1
Q ss_pred EEeecEEEECCCCCchhhhhcCCCCCCCCceeeCccccccCCCCCEEEccccCCC--CCC---chHHHHHHhHHHHHHHH
Q psy8791 309 RLPYAIMHVTPPMGPVPELATSRLVDQSGYVNVDKATLQHVKYSNVFAIGDCSNL--PTS---KTAAAVAGQCKVVYDNL 383 (706)
Q Consensus 309 ~i~~D~vI~a~G~~~~~~~~~~~l~~~~G~i~vd~~~l~~~~~~~Ifa~GD~~~~--~~~---~~~~~a~~qg~~~a~ni 383 (706)
.+++|.++.+.|.++..... ..+.+.+|. .++ |+.|+|||+||++.. +.+ ++...++..|+.+|+.|
T Consensus 249 ~~~~~~~~~~~g~~~~~~~~------~e~~iv~~~-~~~-t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I 320 (326)
T 3fpz_A 249 IVDIDQNQKLGGMKGLDMNH------AEHDVVIHS-GAY-AGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQI 320 (326)
T ss_dssp HHHHCTTCCCCCCCCBCHHH------HHHHHHHHC-EEC-TTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHH
T ss_pred EEecCceeeecceecccccc------cCCeEEECC-CeE-ECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHH
Confidence 45677777778877753221 124566666 444 899999999999752 111 12234567899999999
Q ss_pred HHHHc
Q psy8791 384 SAVMK 388 (706)
Q Consensus 384 ~~~l~ 388 (706)
.+.|+
T Consensus 321 ~~~la 325 (326)
T 3fpz_A 321 LKHFA 325 (326)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 98874
No 186
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.90 E-value=7.3e-10 Score=122.21 Aligned_cols=116 Identities=12% Similarity=0.097 Sum_probs=76.0
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
.++||+|||||+||+++|..|++. .+|+|||+++...+... . ...
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~---~~V~vie~~~~~GG~~~---------~-~~~---------------------- 151 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY---LTVALIEERGWLGGDMW---------L-KGI---------------------- 151 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT---CCEEEECTTSSSSCSGG---------G-TCS----------------------
T ss_pred ccCCEEEECccHHHHHHHHHHHhc---CCEEEEeCCCCCCCeee---------c-ccc----------------------
Confidence 467999999999999999999986 89999999876532110 0 000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhccCCcEE-EeceEEEEEcCCCeEEc---CCCc-
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATW-VKDKIVSFDPENNRVRT---QAGS- 620 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~-~~~~v~~id~~~~~V~~---~~g~- 620 (706)
. . +.++. ...++...+.+.+..++++ ++.+|..|+.+.+.+.+ ++++
T Consensus 152 -------------------~--~-~g~~~------~~~~~~~~l~~~l~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~ 203 (493)
T 1y56_A 152 -------------------K--Q-EGFNK------DSRKVVEELVGKLNENTKIYLETSALGVFDKGEYFLVPVVRGDKL 203 (493)
T ss_dssp -------------------E--E-TTTTE------EHHHHHHHHHHTCCTTEEEETTEEECCCEECSSSEEEEEEETTEE
T ss_pred -------------------c--c-CCCCC------CHHHHHHHHHHHHhcCCEEEcCCEEEEEEcCCcEEEEEEecCCeE
Confidence 0 0 00000 0111112222222457887 45678888887765433 3453
Q ss_pred -EEeeCEEEEecCcccCccCCCCch
Q psy8791 621 -EISYEYMIVASGIQMYYDRVKGGT 644 (706)
Q Consensus 621 -~i~yd~lViAtGs~~~~p~i~G~~ 644 (706)
.+.||+||||||+.|..|++||.+
T Consensus 204 ~~~~~d~lvlAtGa~~~~~~~~g~~ 228 (493)
T 1y56_A 204 IEILAKRVVLATGAIDSTMLFENND 228 (493)
T ss_dssp EEEEESCEEECCCEEECCCCCTTTT
T ss_pred EEEECCEEEECCCCCccCCCCCCCC
Confidence 689999999999999999999976
No 187
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.89 E-value=2.2e-10 Score=132.23 Aligned_cols=37 Identities=16% Similarity=0.241 Sum_probs=33.2
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.+++|+|||||+||+++|..|+++ +.+|+|||+++..
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~--G~~Vtlie~~~~~ 424 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMES--GYTVHLTDTAEKI 424 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSST
T ss_pred CCceEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCCc
Confidence 467999999999999999999998 7899999997653
No 188
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.81 E-value=1.2e-09 Score=125.64 Aligned_cols=37 Identities=27% Similarity=0.288 Sum_probs=33.5
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..+||+|||||+||+++|..|+++ +.+|+|||+++..
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~--G~~V~liE~~~~~ 426 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVR--GYDVVLAEAGRDL 426 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCCC
Confidence 467999999999999999999998 8999999997654
No 189
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.78 E-value=2.9e-08 Score=109.90 Aligned_cols=59 Identities=5% Similarity=0.026 Sum_probs=50.7
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCc
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGP 323 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~ 323 (706)
...+.+.+.+.+++.|++|+++++|++|..++++++.+.+++|+++.||.||.+++...
T Consensus 220 ~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 220 TGALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---
T ss_pred CcchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHH
Confidence 46788899999999999999999999999888888877788999999999999877543
No 190
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.76 E-value=1.7e-09 Score=129.38 Aligned_cols=151 Identities=15% Similarity=0.150 Sum_probs=87.9
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCC-cEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKG-QVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVS 544 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~-~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 544 (706)
..+||+|||||+||+++|..|++. +. +|+|||+.+.. ||.... ..|-
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~--G~~~Vtv~E~~~~~----------GG~~~~---~ip~----------------- 233 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARL--GYSDITIFEKQEYV----------GGLSTS---EIPQ----------------- 233 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHT--TCCCEEEEESSSSC----------STHHHH---TSCT-----------------
T ss_pred CCCEEEEECccHHHHHHHHHHHhc--CCCcEEEEeCCCCC----------Cccccc---cCCc-----------------
Confidence 467999999999999999999998 66 79999986543 222110 0000
Q ss_pred cCCCceEEEeeecceecCCCcccccCcccccccccccccccc-cchhhhccCCcEEEeceEEEEEcCCCeEEcCCCcEEe
Q psy8791 545 FDSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSR-RPMKSVLPSGATWVKDKIVSFDPENNRVRTQAGSEIS 623 (706)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~ 623 (706)
+. ...+.. .....+.+.||+++.++++. .+.|++++++++.
T Consensus 234 ---------------------------~~-------~~~~~~~~~~~~~~~~gv~~~~~~~v~----~~~v~~~~~~~~~ 275 (1025)
T 1gte_A 234 ---------------------------FR-------LPYDVVNFEIELMKDLGVKIICGKSLS----ENEITLNTLKEEG 275 (1025)
T ss_dssp ---------------------------TT-------SCHHHHHHHHHHHHTTTCEEEESCCBS----TTSBCHHHHHHTT
T ss_pred ---------------------------cc-------CCHHHHHHHHHHHHHCCcEEEcccEec----cceEEhhhcCccC
Confidence 00 000011 11122233689987776542 1346666666688
Q ss_pred eCEEEEecCc-ccCccCC-CCchhhhcccccccccccCcc---------ch-hhhccCccEEEE-----cHHHHHHHHHH
Q psy8791 624 YEYMIVASGI-QMYYDRV-KGGTTSLEDRGKMRGVSDGFS---------TV-TWEQKHKQYQLV-----SPEIRAKAYDL 686 (706)
Q Consensus 624 yd~lViAtGs-~~~~p~i-~G~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~k~vvVi-----G~E~A~~l~~~ 686 (706)
||+||||||+ +|+.+++ ||++.. ..+.....++.... .. .....+++|+|| |+|+|..+.++
T Consensus 276 ~d~vvlAtGa~~p~~l~~~~G~~~~-~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~ 354 (1025)
T 1gte_A 276 YKAAFIGIGLPEPKTDDIFQGLTQD-QGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRC 354 (1025)
T ss_dssp CCEEEECCCCCEECCCGGGTTCCTT-TTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHT
T ss_pred CCEEEEecCCCCCCCCCCCCCCCCC-CCEEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHc
Confidence 9999999999 5876654 465421 11111111111000 00 012235689999 89999888776
Q ss_pred H
Q psy8791 687 T 687 (706)
Q Consensus 687 ~ 687 (706)
.
T Consensus 355 G 355 (1025)
T 1gte_A 355 G 355 (1025)
T ss_dssp T
T ss_pred C
Confidence 4
No 191
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.76 E-value=7.9e-09 Score=97.51 Aligned_cols=115 Identities=17% Similarity=0.136 Sum_probs=73.4
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCcccccccccccC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSFD 546 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 546 (706)
|++|+|||||++|+.+|..|++. +.+|+|||+++....... .
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~--g~~v~lie~~~~~~~~~~------------~------------------------ 42 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARA--GLKVLVLDGGRSKVKGVS------------R------------------------ 42 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSCCTTTTCS------------C------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCCCcccCch------------h------------------------
Confidence 57999999999999999999998 789999998653210000 0
Q ss_pred CCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEEeceEEEEEcCCC--eEEcCCCcEEe
Q psy8791 547 SSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWVKDKIVSFDPENN--RVRTQAGSEIS 623 (706)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~~v~~id~~~~--~V~~~~g~~i~ 623 (706)
+... +.++. .....++...+.+.+. .|++++.++|++++.+.. .|++++| ++.
T Consensus 43 -------------~~~~------~~~~~----~~~~~~~~~~l~~~~~~~gv~v~~~~v~~i~~~~~~~~v~~~~g-~i~ 98 (180)
T 2ywl_A 43 -------------VPNY------PGLLD----EPSGEELLRRLEAHARRYGAEVRPGVVKGVRDMGGVFEVETEEG-VEK 98 (180)
T ss_dssp -------------CCCS------TTCTT----CCCHHHHHHHHHHHHHHTTCEEEECCCCEEEECSSSEEEECSSC-EEE
T ss_pred -------------hhcc------CCCcC----CCCHHHHHHHHHHHHHHcCCEEEeCEEEEEEEcCCEEEEEECCC-EEE
Confidence 0000 00000 0001112222333332 689997669999987543 5677788 899
Q ss_pred eCEEEEecCcccCccCCCCc
Q psy8791 624 YEYMIVASGIQMYYDRVKGG 643 (706)
Q Consensus 624 yd~lViAtGs~~~~p~i~G~ 643 (706)
+|.||+|+|..|..+...|+
T Consensus 99 ad~vI~A~G~~~~~~~~~g~ 118 (180)
T 2ywl_A 99 AERLLLCTHKDPTLPSLLGL 118 (180)
T ss_dssp EEEEEECCTTCCHHHHHHTC
T ss_pred ECEEEECCCCCCCccccCCC
Confidence 99999999999865433343
No 192
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.74 E-value=1.3e-08 Score=110.27 Aligned_cols=91 Identities=11% Similarity=0.080 Sum_probs=65.5
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCC--------CCch-hhhhc--CCCCC
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPP--------MGPV-PELAT--SRLVD 334 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G--------~~~~-~~~~~--~~l~~ 334 (706)
..+...++..+++.| +++++++|++|+.+++.+.+. +++|+++.||.||+|+| +.|+ +.... .+...
T Consensus 204 ~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~-~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~ 281 (431)
T 3k7m_X 204 NGSADLVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVT-VKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGH 281 (431)
T ss_dssp TCTHHHHHHHHTTCS-CEESSCCEEEEECSSSSEEEE-ETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCC
T ss_pred CcHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEE-ECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCC
Confidence 345566667777788 999999999998766656544 45778899999999999 7777 22111 12223
Q ss_pred CCCceeeCccccccCCCCCEEEcccc
Q psy8791 335 QSGYVNVDKATLQHVKYSNVFAIGDC 360 (706)
Q Consensus 335 ~~G~i~vd~~~l~~~~~~~Ifa~GD~ 360 (706)
....++|+. .++ +..++||+.||+
T Consensus 282 ~~~~~kv~~-~~~-~~~~~i~~~~d~ 305 (431)
T 3k7m_X 282 GGQGLKILI-HVR-GAEAGIECVGDG 305 (431)
T ss_dssp CCCEEEEEE-EEE-SCCTTEEEEBSS
T ss_pred CcceEEEEE-EEC-CCCcCceEcCCC
Confidence 334488998 566 678999999986
No 193
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.72 E-value=9.6e-08 Score=101.91 Aligned_cols=58 Identities=7% Similarity=0.069 Sum_probs=42.6
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEE---eCCCceEEeecEEEECCCCCc
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFK---SEDKTERLPYAIMHVTPPMGP 323 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~---~~~~g~~i~~D~vI~a~G~~~ 323 (706)
..+...+.+.+.+.|++++.++++..+..+++.+..+ ..+++.++.+|+||-|.|...
T Consensus 102 ~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCcccc
Confidence 3455666777778899999999999887666554332 222345789999999999765
No 194
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.68 E-value=4.5e-09 Score=112.49 Aligned_cols=38 Identities=24% Similarity=0.273 Sum_probs=34.0
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
|+.+||+|||||++|+++|..++++ +.+|+|+|+++..
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~--G~~V~vlEk~~~~ 39 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKL--GKSVTVFDNGKKI 39 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSS
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhC--CCCEEEEeCCCCC
Confidence 4568999999999999999999998 7899999997754
No 195
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.63 E-value=3e-07 Score=98.64 Aligned_cols=58 Identities=9% Similarity=0.036 Sum_probs=47.5
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
...+.+.+.+.+++.||+++++++|+++..+++.+.+. +++| ++.+|.||+|+|..+.
T Consensus 131 ~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~-~~~g-~i~ad~VIlAtG~~S~ 188 (417)
T 3v76_A 131 AKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVT-TSAG-TVDAASLVVASGGKSI 188 (417)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEE-ETTE-EEEESEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEE-ECCc-EEEeeEEEECCCCccC
Confidence 35788888899999999999999999998766555543 3455 8999999999999874
No 196
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.62 E-value=3.8e-07 Score=96.26 Aligned_cols=76 Identities=5% Similarity=-0.086 Sum_probs=57.0
Q ss_pred EeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCE-EEEEeCCCc--eEEeecEEEECCCCCchhhhhcC-C
Q psy8791 256 CTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKE-AVFKSEDKT--ERLPYAIMHVTPPMGPVPELATS-R 331 (706)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~-v~~~~~~~g--~~i~~D~vI~a~G~~~~~~~~~~-~ 331 (706)
..+......+..+.+.+.+.+++.|++++++++|+++..+++. +.+ .+++| .++.+|.||+|+|.+...++... |
T Consensus 140 ~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v-~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g 218 (369)
T 3dme_A 140 VSPSTGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFEL-DFGGAEPMTLSCRVLINAAGLHAPGLARRIEG 218 (369)
T ss_dssp EETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEE-EECTTSCEEEEEEEEEECCGGGHHHHHHTEET
T ss_pred ECCCCEEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEE-EECCCceeEEEeCEEEECCCcchHHHHHHhcC
Confidence 3333333445788889999999999999999999999876443 433 34455 58999999999999987777655 4
Q ss_pred C
Q psy8791 332 L 332 (706)
Q Consensus 332 l 332 (706)
+
T Consensus 219 ~ 219 (369)
T 3dme_A 219 I 219 (369)
T ss_dssp S
T ss_pred C
Confidence 4
No 197
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.61 E-value=9.4e-08 Score=105.41 Aligned_cols=44 Identities=18% Similarity=0.326 Sum_probs=33.0
Q ss_pred cccccccccCcchhHHHHHHHHHhhc------------CCCcEEEECCCCCCcCCc
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRL------------GKGQVSIVEPTDDHYYQP 508 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~------------~~~~i~vid~~~~~~~~~ 508 (706)
..++||||||+|++||++|..|++.. +......+|+.+.+.|.+
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~ 92 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHS 92 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSG
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCC
Confidence 35789999999999999999998752 123566778877665443
No 198
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.59 E-value=4.9e-07 Score=98.13 Aligned_cols=74 Identities=11% Similarity=-0.034 Sum_probs=57.2
Q ss_pred EEEeCCC-cCCCchhHHHHHHHHHHhCCceEEcCC---ceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhh
Q psy8791 254 TYCTGMG-VLFPSPFYAEKIHDILIGRGVDVHKGK---ALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPEL 327 (706)
Q Consensus 254 ~l~~~~~-~~~~~~~~~~~~~~~l~~~gV~v~~~~---~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~ 327 (706)
.++.+.. ....+..+...+.+.+++.|+++++++ +|+++..+++.++.+.+.+|+++.+|.||+|+|......+
T Consensus 148 g~~~~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l~ 225 (438)
T 3dje_A 148 GYFARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAGQFL 225 (438)
T ss_dssp EEEESSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGGGTS
T ss_pred EEEeCCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChhhhc
Confidence 3344444 334456788889999999999999999 9999987666676455667889999999999999876554
No 199
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.59 E-value=1.2e-08 Score=109.45 Aligned_cols=158 Identities=18% Similarity=0.266 Sum_probs=77.9
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
.++||+|||||+||+++|..|++. +.+|+|+|+++...... ...++|.|+..........++.....+.......+
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~--G~~V~llEk~~~~g~~~--~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~ 101 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKR--GRRVLVIDHARAPGEKI--RISGGGRCNFTNIHASPRNFLSGNPHFCKSALARY 101 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCHHH--HHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCCCCCcee--EEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhc
Confidence 467999999999999999999998 88999999987643111 01234555443332222222211111111000000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhcc-CCcEEE-eceEEEEEcCCC--eEEcCCCcE
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLP-SGATWV-KDKIVSFDPENN--RVRTQAGSE 621 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~-~~~v~~id~~~~--~V~~~~g~~ 621 (706)
.+. ++ ...++.............+.. .....++...+.+.+. .|+++. +.+|+.|+.+.. .|.+.+| +
T Consensus 102 ~~~-~~-----~~~~~~~Gi~~~~~~~g~~~~-~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~ 173 (417)
T 3v76_A 102 RPQ-DF-----VALVERHGIGWHEKTLGQLFC-DHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-T 173 (417)
T ss_dssp CHH-HH-----HHHHHHTTCCEEECSTTEEEE-SSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-E
T ss_pred CHH-HH-----HHHHHHcCCCcEEeeCCEEee-CCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-E
Confidence 000 00 000000000000000000000 0011122222222222 589985 468998876554 4666777 8
Q ss_pred EeeCEEEEecCccc
Q psy8791 622 ISYEYMIVASGIQM 635 (706)
Q Consensus 622 i~yd~lViAtGs~~ 635 (706)
+.+|+||+|||+.+
T Consensus 174 i~ad~VIlAtG~~S 187 (417)
T 3v76_A 174 VDAASLVVASGGKS 187 (417)
T ss_dssp EEESEEEECCCCSS
T ss_pred EEeeEEEECCCCcc
Confidence 99999999999876
No 200
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.58 E-value=5.9e-08 Score=95.57 Aligned_cols=127 Identities=20% Similarity=0.196 Sum_probs=75.0
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCcCCcceEEeeccccccccccccccccCCCCccccccccccc
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVLPSGATWVKDKIVSF 545 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 545 (706)
+.+||+|||||++|+.+|..|++. +.+|+|||++.... |. . +.|.-.-+... ...
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~--g~~v~lie~~~~~~----------G~-~----~~~~~~~~~~~-----~~~--- 56 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQK--GVRVGLLTQSLDAV----------MM-P----FLPPKPPFPPG-----SLL--- 56 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCGGGT----------TC-C----SSCCCSCCCTT-----CHH---
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--CCCEEEEecCCCcC----------Cc-c----cCccccccchh-----hHH---
Confidence 457999999999999999999998 88999999864321 10 0 00000000000 000
Q ss_pred CCCceEEEeeecceecCCCcccccCcccccccccccccccccchhhhc-cC-CcEEEeceEEEEEcCCC---eEEcCCCc
Q psy8791 546 DSSYTFTILILHSIVEPTDDHYYQPMFTLIGGGMKKLSDSRRPMKSVL-PS-GATWVKDKIVSFDPENN---RVRTQAGS 620 (706)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-gv~~~~~~v~~id~~~~---~V~~~~g~ 620 (706)
+. ++. ..+. ....+...+.+.+ +. |+++++++|++++.+.. .|.+.+|+
T Consensus 57 -----------~~-~~d-------------~~g~-~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~ 110 (232)
T 2cul_A 57 -----------ER-AYD-------------PKDE-RVWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGP 110 (232)
T ss_dssp -----------HH-HCC-------------TTCC-CHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSC
T ss_pred -----------hh-hcc-------------CCCC-CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCC
Confidence 00 000 0000 0111122222223 23 89998889999987554 35677888
Q ss_pred EEeeCEEEEecCcccCccCCCCc
Q psy8791 621 EISYEYMIVASGIQMYYDRVKGG 643 (706)
Q Consensus 621 ~i~yd~lViAtGs~~~~p~i~G~ 643 (706)
++.+|+||+|+|..+.....+|.
T Consensus 111 ~i~a~~VV~A~G~~s~~~~~~G~ 133 (232)
T 2cul_A 111 PARGEKVVLAVGSFLGARLFLGG 133 (232)
T ss_dssp CEECSEEEECCTTCSSCEEEETT
T ss_pred EEECCEEEECCCCChhhceecCC
Confidence 99999999999997665444554
No 201
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.57 E-value=8.3e-07 Score=94.32 Aligned_cols=75 Identities=8% Similarity=-0.170 Sum_probs=56.3
Q ss_pred EEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhc
Q psy8791 254 TYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELAT 329 (706)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~ 329 (706)
.++.+....+.+..+...+.+.+++.|++++.+++|++++.+++.+..+.+++| ++.+|.||+|+|.........
T Consensus 137 ~~~~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~ 211 (382)
T 1y56_B 137 ASWNPTDGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAM 211 (382)
T ss_dssp EEEETTCCEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHH
T ss_pred EEEcCCCeeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHH
Confidence 344444444456778888999999999999999999999876665552334455 799999999999987655443
No 202
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.55 E-value=1.3e-06 Score=93.60 Aligned_cols=78 Identities=5% Similarity=-0.126 Sum_probs=58.8
Q ss_pred EEEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhcCC
Q psy8791 253 LTYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELATSR 331 (706)
Q Consensus 253 v~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~~ 331 (706)
-.++.+....+.+..+.+.+.+.+++.|++++.+++|+++..+++.+..+.+++| ++.+|.||+|+|...+......+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g 238 (405)
T 2gag_B 161 GATWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAG 238 (405)
T ss_dssp EEEEETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHT
T ss_pred eEEEeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcC
Confidence 4455555555556788888999999999999999999999866554444444456 79999999999998865554443
No 203
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.53 E-value=1.4e-06 Score=92.84 Aligned_cols=79 Identities=9% Similarity=0.002 Sum_probs=60.3
Q ss_pred cEEEEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhcC
Q psy8791 251 AKLTYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELATS 330 (706)
Q Consensus 251 ~~v~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~ 330 (706)
....++.+....+.+..+...+.+.+++.|++++.+++|++++.+++.+.+. +++| ++.+|.||+|+|.+++..+...
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~-~~~g-~~~a~~vV~A~G~~~~~l~~~~ 212 (389)
T 2gf3_A 135 NYNAIFEPNSGVLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIE-TANG-SYTADKLIVSMGAWNSKLLSKL 212 (389)
T ss_dssp TEEEEEETTCEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEE-ETTE-EEEEEEEEECCGGGHHHHGGGG
T ss_pred CceEEEeCCCcEEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEE-eCCC-EEEeCEEEEecCccHHHHhhhh
Confidence 4566666666555567888899999999999999999999998755545443 3344 7999999999999887665543
Q ss_pred C
Q psy8791 331 R 331 (706)
Q Consensus 331 ~ 331 (706)
+
T Consensus 213 g 213 (389)
T 2gf3_A 213 N 213 (389)
T ss_dssp T
T ss_pred c
Confidence 3
No 204
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.51 E-value=1.4e-06 Score=93.88 Aligned_cols=57 Identities=12% Similarity=0.274 Sum_probs=48.9
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
...+.+.+.+.+++.|++++++++|++|..+++.+ + . .+|+++++|.||+|+|....
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~-~~g~~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-T-RDNEEYSFDVAISNVGVRET 244 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-E-TTCCEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-E-eCCcEEEeCEEEECCCHHHH
Confidence 46788999999999999999999999999877776 3 3 36789999999999997654
No 205
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.50 E-value=5.1e-07 Score=99.68 Aligned_cols=61 Identities=8% Similarity=0.070 Sum_probs=51.4
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhh
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPE 326 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~ 326 (706)
+.+.+.+.+.+++.|++++++++|+++..+++.+..+.+++|+++.+|.||+|+|..+.+.
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~~~ 280 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSARDT 280 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCHHH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhH
Confidence 5677888888999999999999999998766656555566888999999999999999743
No 206
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.49 E-value=1.4e-07 Score=104.96 Aligned_cols=50 Identities=14% Similarity=0.093 Sum_probs=40.5
Q ss_pred CCcEEEeceEEEEEcCCC---eEEcCCCcEEeeCEEEEecCcccCccCCCCch
Q psy8791 595 SGATWVKDKIVSFDPENN---RVRTQAGSEISYEYMIVASGIQMYYDRVKGGT 644 (706)
Q Consensus 595 ~gv~~~~~~v~~id~~~~---~V~~~~g~~i~yd~lViAtGs~~~~p~i~G~~ 644 (706)
.|+++++++|+++..++. .|.+.+|.++.+|.||+|||+.+..+.++|..
T Consensus 138 ~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~~i~G~~ 190 (651)
T 3ces_A 138 PNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLD 190 (651)
T ss_dssp TTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCCEEECC--
T ss_pred CCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccCccccCcc
Confidence 489999999999976554 35677888899999999999998877777764
No 207
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.48 E-value=4.6e-07 Score=98.51 Aligned_cols=59 Identities=14% Similarity=0.074 Sum_probs=48.1
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
..+.+.+.+.+++.||+++++++|+++..+++.+..+.+++|+++.+|.||+|+|..+.
T Consensus 134 ~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s~ 192 (447)
T 2i0z_A 134 QSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKSV 192 (447)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSSS
T ss_pred HHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCcC
Confidence 56778888889999999999999999985555544444557777999999999999884
No 208
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.48 E-value=1.9e-07 Score=99.33 Aligned_cols=105 Identities=19% Similarity=0.227 Sum_probs=69.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcc-cc----------c------cc-C------------c
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPM-FT----------L------IG-G------------G 79 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~-~~----------~------~~-~------------~ 79 (706)
.++|+|||||++|+++|..|++. |.+|+|||+++.....+. .. . +. . +
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~--G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g 88 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQN--GWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHN 88 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETT
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCC
Confidence 57999999999999999999998 899999999875422110 00 0 00 0 0
Q ss_pred c----cc---Cccc-------cccc-ccccCCCcEEEE-ceeEEEEcCCCEEEeCCCeEEEecEEEEccccccc
Q psy8791 80 M----KK---LSDS-------RRPM-KSVLPSGATWVK-DKIVSFDPENNRVRTQAGSEISYEYMIVASGIQMY 137 (706)
Q Consensus 80 ~----~~---~~~~-------~~~~-~~~~~~~v~~i~-~~v~~id~~~~~v~~~~g~~~~yd~lviAtG~~~~ 137 (706)
. .. .... ...+ +.+...++++.. .+|++++.+. .|++.+|.++.+|+||.|+|....
T Consensus 89 ~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 89 KSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVG-RLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp EEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTT-EEEETTSCEEECSEEEECCCTTCH
T ss_pred ceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCC-EEEECCCCEEEcCEEEECCCccHH
Confidence 0 00 0000 0001 111125788876 5788888755 888888888999999999998654
No 209
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.47 E-value=3.2e-07 Score=102.78 Aligned_cols=59 Identities=15% Similarity=0.213 Sum_probs=44.0
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCC-CCEEEEEeCCCc--eEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLA-NKEAVFKSEDKT--ERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~-~~~v~~~~~~~g--~~i~~D~vI~a~G~~~~ 324 (706)
..+...+.+.+++.||+++.+++|+++..+ ++.+.+...++| .++.+|+||.|+|..+.
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~ 189 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGGP 189 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGCH
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcch
Confidence 456677778888899999999999999864 332322222145 68999999999999764
No 210
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.46 E-value=7.1e-07 Score=94.70 Aligned_cols=75 Identities=8% Similarity=-0.122 Sum_probs=56.5
Q ss_pred EEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhcCC
Q psy8791 255 YCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELATSR 331 (706)
Q Consensus 255 l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~~ 331 (706)
++.+....+.+..+...+.+.+++.|++++.+++|+++..+++.+.+ .+++| ++.+|.||+|+|......+...+
T Consensus 143 ~~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V-~t~~g-~i~a~~VV~A~G~~s~~l~~~~g 217 (381)
T 3nyc_A 143 TYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEV-RCDAG-SYRAAVLVNAAGAWCDAIAGLAG 217 (381)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEE-ECSSE-EEEESEEEECCGGGHHHHHHHHT
T ss_pred EEcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEE-EeCCC-EEEcCEEEECCChhHHHHHHHhC
Confidence 33444333445778888999999999999999999999876665444 45455 89999999999998876655433
No 211
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.45 E-value=1.8e-07 Score=104.20 Aligned_cols=113 Identities=17% Similarity=0.188 Sum_probs=74.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC-cccC---ccccc-----------ccCccc------------
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD-HYYQ---PMFTL-----------IGGGMK------------ 81 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~-~~~~---p~~~~-----------~~~~~~------------ 81 (706)
..+||||||||+||++||..|++. |.+|+|||+++. .... |.... ..++..
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~--G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~ 104 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARM--GQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFR 104 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhC--CCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchh
Confidence 357999999999999999999998 899999999842 1110 11000 000000
Q ss_pred ------cCc-----------cccccccc-ccC-CCcEEEEceeEEEEcCCC---EEEeCCCeEEEecEEEEccccccccC
Q psy8791 82 ------KLS-----------DSRRPMKS-VLP-SGATWVKDKIVSFDPENN---RVRTQAGSEISYEYMIVASGIQMYYD 139 (706)
Q Consensus 82 ------~~~-----------~~~~~~~~-~~~-~~v~~i~~~v~~id~~~~---~v~~~~g~~~~yd~lviAtG~~~~~~ 139 (706)
.+. .+...+.+ +.. .++++..++|+.+..+++ .|.+.+|.++.+|.||+|||+.+..+
T Consensus 105 ~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~ 184 (651)
T 3ces_A 105 ILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGK 184 (651)
T ss_dssp EESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCCE
T ss_pred hhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccCc
Confidence 000 00001111 223 489998899999976555 35677888899999999999877666
Q ss_pred CCCC
Q psy8791 140 RVKG 143 (706)
Q Consensus 140 ~~~g 143 (706)
.++|
T Consensus 185 ~i~G 188 (651)
T 3ces_A 185 IHIG 188 (651)
T ss_dssp EECC
T ss_pred cccC
Confidence 6666
No 212
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.44 E-value=2.4e-06 Score=90.77 Aligned_cols=74 Identities=5% Similarity=-0.046 Sum_probs=55.7
Q ss_pred EeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhcCC
Q psy8791 256 CTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELATSR 331 (706)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~~ 331 (706)
..+....+.+..+.+.+.+.+++.|++++.+++|.+++.+++.+.+ .+++| ++.+|.||+|+|......+...+
T Consensus 154 ~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v-~~~~g-~~~a~~vV~A~G~~s~~l~~~~~ 227 (382)
T 1ryi_A 154 FIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFI-KTPSG-DVWANHVVVASGVWSGMFFKQLG 227 (382)
T ss_dssp EETTCCBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEE-EETTE-EEEEEEEEECCGGGTHHHHHHTT
T ss_pred EeCCCeEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEE-EcCCc-eEEcCEEEECCChhHHHHHHhcC
Confidence 3333334445778888999999999999999999999876655543 34455 89999999999998776655544
No 213
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.44 E-value=1.9e-07 Score=103.56 Aligned_cols=113 Identities=23% Similarity=0.246 Sum_probs=74.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC-ccc---Ccccc---------cc--cCcc---------c---
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD-HYY---QPMFT---------LI--GGGM---------K--- 81 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~-~~~---~p~~~---------~~--~~~~---------~--- 81 (706)
..+||||||||+||++||..|++. |.+|+|||+++. ... .|... .+ .++. .
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~--G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~ 103 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARM--GAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFK 103 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC--CCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhccccee
Confidence 357999999999999999999998 899999999842 111 01100 00 0000 0
Q ss_pred ------cC-----------ccccccccc-ccC-CCcEEEEceeEEEEcCCCE---EEeCCCeEEEecEEEEccccccccC
Q psy8791 82 ------KL-----------SDSRRPMKS-VLP-SGATWVKDKIVSFDPENNR---VRTQAGSEISYEYMIVASGIQMYYD 139 (706)
Q Consensus 82 ------~~-----------~~~~~~~~~-~~~-~~v~~i~~~v~~id~~~~~---v~~~~g~~~~yd~lviAtG~~~~~~ 139 (706)
.+ ..+...+.+ +.. .+++++.++|++|..+.+. |.+.+|.++.+|.+|+|||..+..+
T Consensus 104 ~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~~ 183 (637)
T 2zxi_A 104 MLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGV 183 (637)
T ss_dssp EESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTCE
T ss_pred ecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccCc
Confidence 00 000011111 223 4899988999998866553 6677888899999999999877666
Q ss_pred CCCC
Q psy8791 140 RVKG 143 (706)
Q Consensus 140 ~~~g 143 (706)
.++|
T Consensus 184 ~~~G 187 (637)
T 2zxi_A 184 IYIG 187 (637)
T ss_dssp EEET
T ss_pred eecc
Confidence 6666
No 214
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.43 E-value=1.4e-06 Score=99.84 Aligned_cols=73 Identities=7% Similarity=-0.008 Sum_probs=55.4
Q ss_pred eCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhcC
Q psy8791 257 TGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELATS 330 (706)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~ 330 (706)
.+....+.+..+...+.+.+++.|++++++++|+++..+++.+.+ .+.+|.++.+|.||+|+|.....+....
T Consensus 408 ~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V-~t~~G~~i~Ad~VVlAtG~~s~~l~~~~ 480 (676)
T 3ps9_A 408 YPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLL-NFAGDQQATHSVVVLANGHQISRFSQTS 480 (676)
T ss_dssp ETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEE-EETTSCEEEESEEEECCGGGGGCSTTTT
T ss_pred ecCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEE-EECCCCEEECCEEEECCCcchhcccccc
Confidence 333333345778888999999999999999999999876666644 3446778999999999999876544433
No 215
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.42 E-value=4.9e-07 Score=100.14 Aligned_cols=59 Identities=10% Similarity=0.074 Sum_probs=45.5
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEE--EEeCCCc--eEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAV--FKSEDKT--ERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~--~~~~~~g--~~i~~D~vI~a~G~~~~ 324 (706)
..+.+.+.+.+++.||+++.+++|+++..+++.+. .....+| .++.+|+||.|+|....
T Consensus 111 ~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 111 ARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTR 173 (512)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCS
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchH
Confidence 45667777888889999999999999987666543 2223356 48999999999999764
No 216
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.42 E-value=3.5e-06 Score=90.87 Aligned_cols=59 Identities=10% Similarity=0.099 Sum_probs=49.2
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
...+.+.+.+.+++.|++++++++|++|..+++.++.+.+ +|+++.+|.||+|+|....
T Consensus 195 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 195 CKGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHH
Confidence 4678889999999999999999999999876666654444 4789999999999987655
No 217
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.41 E-value=1.9e-06 Score=98.90 Aligned_cols=67 Identities=7% Similarity=-0.026 Sum_probs=51.9
Q ss_pred CCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCce-EEeecEEEECCCCCchhhhhcC
Q psy8791 263 FPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTE-RLPYAIMHVTPPMGPVPELATS 330 (706)
Q Consensus 263 ~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~-~i~~D~vI~a~G~~~~~~~~~~ 330 (706)
+.+..+...+.+.+++.|++++.+++|+++..+++.+.+. +++|+ ++.+|.||+|+|.....+....
T Consensus 409 v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~-t~~G~~~i~Ad~VVlAtG~~s~~l~~~~ 476 (689)
T 3pvc_A 409 LCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLT-FGQSQAAKHHATVILATGHRLPEWEQTH 476 (689)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEE-EC-CCCCEEESEEEECCGGGTTCSTTTT
T ss_pred ECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEE-eCCCcEEEECCEEEECCCcchhcccccc
Confidence 3457788889999999999999999999998766555443 44666 8999999999999876554433
No 218
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.40 E-value=1.7e-07 Score=102.10 Aligned_cols=78 Identities=12% Similarity=-0.010 Sum_probs=58.4
Q ss_pred EEEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeC---------------CCCEEEEEeCCCceEE--eecEE
Q psy8791 253 LTYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDL---------------ANKEAVFKSEDKTERL--PYAIM 315 (706)
Q Consensus 253 v~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~---------------~~~~v~~~~~~~g~~i--~~D~v 315 (706)
..++.+....+.+..+...+.+.+++.|++++.+++|+++.. +++.+..+.+++| ++ .+|.|
T Consensus 168 ~~~~~~~~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~V 246 (448)
T 3axb_A 168 GAVLIRSAGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKL 246 (448)
T ss_dssp EEEEESSEEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEE
T ss_pred EEEEeCCCeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEE
Confidence 344555444455668889999999999999999999999976 4555544445566 68 99999
Q ss_pred EECCCCCchhhhhcCC
Q psy8791 316 HVTPPMGPVPELATSR 331 (706)
Q Consensus 316 I~a~G~~~~~~~~~~~ 331 (706)
|+|+|.....++...+
T Consensus 247 V~AtG~~s~~l~~~~g 262 (448)
T 3axb_A 247 VVAAGVWSNRLLNPLG 262 (448)
T ss_dssp EECCGGGHHHHHGGGT
T ss_pred EECCCcCHHHHHHHcC
Confidence 9999998776665544
No 219
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.39 E-value=2.9e-07 Score=102.04 Aligned_cols=50 Identities=22% Similarity=0.250 Sum_probs=41.2
Q ss_pred CCcEEEeceEEEEEcCCCe---EEcCCCcEEeeCEEEEecCcccCccCCCCch
Q psy8791 595 SGATWVKDKIVSFDPENNR---VRTQAGSEISYEYMIVASGIQMYYDRVKGGT 644 (706)
Q Consensus 595 ~gv~~~~~~v~~id~~~~~---V~~~~g~~i~yd~lViAtGs~~~~p~i~G~~ 644 (706)
.|+++++++|++|..+... |.+.+|.++.+|.||+|||+.+..+.++|..
T Consensus 137 ~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~~~~~G~~ 189 (637)
T 2zxi_A 137 ENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGVIYIGDK 189 (637)
T ss_dssp TTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTCEEEETTE
T ss_pred CCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccCceeccce
Confidence 4899999999999766553 6778888999999999999988877776643
No 220
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.38 E-value=2.3e-06 Score=91.28 Aligned_cols=59 Identities=7% Similarity=0.110 Sum_probs=46.2
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEE---EEeCCCceEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAV---FKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~---~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
..+.+.+.+.+++.|++++.+++|+++..+++.+. +...+++.++.+|+||.|.|..+.
T Consensus 102 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~ 163 (397)
T 3cgv_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESE 163 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcchH
Confidence 35667777788888999999999999987666544 333346778999999999998873
No 221
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.38 E-value=3.5e-07 Score=97.24 Aligned_cols=37 Identities=24% Similarity=0.317 Sum_probs=32.8
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
+++||+|||||++|+++|..|++. +.+|+|||+++..
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~--G~~v~viE~~~~~ 46 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQN--GWDVRLHEKSSEL 46 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--CCCEEEEecCCCC
Confidence 457999999999999999999998 8899999987654
No 222
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.37 E-value=3.9e-06 Score=88.71 Aligned_cols=73 Identities=7% Similarity=-0.079 Sum_probs=53.2
Q ss_pred EEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhh
Q psy8791 254 TYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELA 328 (706)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~ 328 (706)
.++.+....+.+..+...+.+.+++.|++++.+++|++++.+++.+.+. +++| ++.+|.||+|+|.....++.
T Consensus 137 ~~~~~~~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~-~~~g-~~~a~~vV~a~G~~s~~l~~ 209 (372)
T 2uzz_A 137 GLFETDSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIE-TADG-EYQAKKAIVCAGTWVKDLLP 209 (372)
T ss_dssp EEEESSCEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEE-ESSC-EEEEEEEEECCGGGGGGTST
T ss_pred EEEeCCCcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEE-ECCC-eEEcCEEEEcCCccHHhhcc
Confidence 3344433333356788888899999999999999999998655545443 3455 59999999999988765554
No 223
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.32 E-value=8.2e-07 Score=94.87 Aligned_cols=35 Identities=23% Similarity=0.382 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
++||+|||||++|++||..|+++ |.+|+|||+++.
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~--G~~V~vlEk~~~ 38 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKL--GKSVTVFDNGKK 38 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHhC--CCCEEEEeCCCC
Confidence 47999999999999999999998 899999999875
No 224
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.31 E-value=7.3e-07 Score=95.72 Aligned_cols=46 Identities=20% Similarity=0.234 Sum_probs=33.3
Q ss_pred cccCCCCCCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 19 FSTSPLSSSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 19 ~~~~~~~~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..+.+..+...+++|+|||||++|+++|..|+++ |++|+|||+.+.
T Consensus 12 ~~~~~~~~~~~~~dV~IVGaG~aGl~~A~~La~~--G~~V~v~E~~~~ 57 (407)
T 3rp8_A 12 HSSGENLYFQGHMKAIVIGAGIGGLSAAVALKQS--GIDCDVYEAVKE 57 (407)
T ss_dssp -----------CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSC
T ss_pred cCCCCcccCCCCCEEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCCC
Confidence 3334444555678999999999999999999999 899999999875
No 225
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.30 E-value=4.6e-07 Score=100.84 Aligned_cols=109 Identities=19% Similarity=0.252 Sum_probs=71.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC-ccc---Cccccc-----------ccCccc------------
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD-HYY---QPMFTL-----------IGGGMK------------ 81 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~-~~~---~p~~~~-----------~~~~~~------------ 81 (706)
..+||+|||||+||++||..|++. |.+|+|||+++. ... .|.... ..++..
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~--G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~ 97 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARG--GLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFR 97 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHC--CCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchh
Confidence 457999999999999999999999 899999999842 111 011000 000000
Q ss_pred ------cCc-----------cccccccc-ccC-CCcEEEEceeEEEEcCCCE---EEeCCCeEEEecEEEEccccccccC
Q psy8791 82 ------KLS-----------DSRRPMKS-VLP-SGATWVKDKIVSFDPENNR---VRTQAGSEISYEYMIVASGIQMYYD 139 (706)
Q Consensus 82 ------~~~-----------~~~~~~~~-~~~-~~v~~i~~~v~~id~~~~~---v~~~~g~~~~yd~lviAtG~~~~~~ 139 (706)
.+. .+...+.+ +.. .+++++.++|+.+..+... |.+.+|.++.+|.+|+|||+.+...
T Consensus 98 ~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~~~ 177 (641)
T 3cp8_A 98 MLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLNGL 177 (641)
T ss_dssp EECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBTCE
T ss_pred hcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCCcc
Confidence 000 00001111 223 4899988999998766554 5677888899999999999875543
No 226
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.30 E-value=1.2e-06 Score=97.42 Aligned_cols=38 Identities=29% Similarity=0.498 Sum_probs=34.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHY 68 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~ 68 (706)
.+++|+|||||+|||+||..|++. |++|+|+|++++..
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~--G~~V~vlE~~~~~G 40 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDS--GLNVVVLEARDRVG 40 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHT--TCCEEEECSSSSSB
T ss_pred CCceEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCCCCC
Confidence 357999999999999999999998 89999999998743
No 227
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.30 E-value=5.4e-07 Score=99.24 Aligned_cols=114 Identities=18% Similarity=0.236 Sum_probs=71.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCccc---c-------cccC----ccc--------cCcc
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMF---T-------LIGG----GMK--------KLSD 85 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~---~-------~~~~----~~~--------~~~~ 85 (706)
...++|+|||||++||++|..|++. |.+|+|||+++........ + .... +.. ....
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~--G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 167 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALL--GARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQ 167 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHH
T ss_pred cCCCCEEEECccHHHHHHHHHHHHC--CCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHH
Confidence 3467999999999999999999998 8999999998753211000 0 0000 000 0001
Q ss_pred ccccccc-ccCCCcEEEE-ceeEEEEcCC-----CEEEe--C-CC--eEEEecEEEEccccccccCCCCC
Q psy8791 86 SRRPMKS-VLPSGATWVK-DKIVSFDPEN-----NRVRT--Q-AG--SEISYEYMIVASGIQMYYDRVKG 143 (706)
Q Consensus 86 ~~~~~~~-~~~~~v~~i~-~~v~~id~~~-----~~v~~--~-~g--~~~~yd~lviAtG~~~~~~~~~g 143 (706)
+...+.+ +...++++.. .+|+++..+. -.|.+ . +| .++.+|+||+|+|..+......+
T Consensus 168 l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~~~~ 237 (497)
T 2bry_A 168 LQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEGFTI 237 (497)
T ss_dssp HHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCTTCEE
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccccccc
Confidence 1111111 1125788876 5888988631 25655 3 55 46899999999998775544333
No 228
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.30 E-value=5.2e-06 Score=88.64 Aligned_cols=75 Identities=8% Similarity=-0.000 Sum_probs=54.1
Q ss_pred EEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhcCC
Q psy8791 255 YCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELATSR 331 (706)
Q Consensus 255 l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~~ 331 (706)
++.+....+.+..+...+.+.+++.|++++.+++|+++..+++.+.+. +++ .++.+|.||.|+|......+...+
T Consensus 142 ~~~~~~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~-t~~-g~i~a~~VV~A~G~~s~~l~~~~g 216 (397)
T 2oln_A 142 FLQPDGGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVT-TDR-GTYRAGKVVLACGPYTNDLLEPLG 216 (397)
T ss_dssp EEETTCEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEE-ESS-CEEEEEEEEECCGGGHHHHHGGGT
T ss_pred EEcCCCCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEE-ECC-CEEEcCEEEEcCCcChHHHhhhcC
Confidence 333333333345677788888899999999999999998665556543 334 479999999999998766655544
No 229
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.30 E-value=1.2e-06 Score=89.09 Aligned_cols=108 Identities=19% Similarity=0.204 Sum_probs=67.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCccc-----c-------------cccC-----ccc----c
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPMF-----T-------------LIGG-----GMK----K 82 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~-----~-------------~~~~-----~~~----~ 82 (706)
.+||+|||||++|+++|..|+++ ++.+|+|||+++........ . .... +.+ .
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~-~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 117 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKN-PNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKH 117 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTS-TTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred ccCEEEECccHHHHHHHHHHHHc-CCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecC
Confidence 46999999999999999999983 37899999998753211000 0 0000 000 0
Q ss_pred Ccccccc-cccccC-CCcEEEE-ceeEEEEcCCCEE---EeC---------CC-----eEEEecEEEEcccccccc
Q psy8791 83 LSDSRRP-MKSVLP-SGATWVK-DKIVSFDPENNRV---RTQ---------AG-----SEISYEYMIVASGIQMYY 138 (706)
Q Consensus 83 ~~~~~~~-~~~~~~-~~v~~i~-~~v~~id~~~~~v---~~~---------~g-----~~~~yd~lviAtG~~~~~ 138 (706)
...+... .+.+.. .++++.. .+|++++.+.+.+ .+. ++ .++.+|.+|+|+|..+..
T Consensus 118 ~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~ 193 (284)
T 1rp0_A 118 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPF 193 (284)
T ss_dssp HHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTT
T ss_pred HHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHH
Confidence 0001001 122333 5899877 5888988665533 331 22 578999999999987654
No 230
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.29 E-value=9.7e-06 Score=95.17 Aligned_cols=77 Identities=9% Similarity=-0.055 Sum_probs=58.0
Q ss_pred EEEeCCCcCCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhcCC
Q psy8791 254 TYCTGMGVLFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELATSR 331 (706)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~~ 331 (706)
.+..+....+.+..+...+.+.+++.|++++.+++|+++..+++.+..+.+++| ++.||.||+|+|.....+....+
T Consensus 139 g~~~~~~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l~~~~g 215 (830)
T 1pj5_A 139 GLHVPSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKIGAMIG 215 (830)
T ss_dssp EEEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHHHHTTT
T ss_pred EEEECCCceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHHHHHhC
Confidence 344444444445688889999999999999999999999876565544445555 79999999999998876554443
No 231
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.27 E-value=1e-06 Score=94.29 Aligned_cols=106 Identities=18% Similarity=0.232 Sum_probs=67.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccCcc---c-c-------------cc--------------cC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQPM---F-T-------------LI--------------GG 78 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~p~---~-~-------------~~--------------~~ 78 (706)
+++|+|||||++|+++|..|+++ |++|+|||+++....... + + .+ ..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~--G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQ--GHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHD 83 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEET
T ss_pred cCCEEEECcCHHHHHHHHHHHhC--CCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCC
Confidence 46999999999999999999998 899999999865311100 0 0 00 00
Q ss_pred c----cccCcc-------cccc-------cc-cccCC-CcEEEE-ceeEEEEcCCC----EEEeCCCeEEEecEEEEccc
Q psy8791 79 G----MKKLSD-------SRRP-------MK-SVLPS-GATWVK-DKIVSFDPENN----RVRTQAGSEISYEYMIVASG 133 (706)
Q Consensus 79 ~----~~~~~~-------~~~~-------~~-~~~~~-~v~~i~-~~v~~id~~~~----~v~~~~g~~~~yd~lviAtG 133 (706)
+ ...... ...+ +. .+.+. ++++.. .+|++++.+.. .|++.+|+++.+|+||.|+|
T Consensus 84 g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG 163 (399)
T 2x3n_A 84 GELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADG 163 (399)
T ss_dssp TEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCC
T ss_pred CCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCC
Confidence 0 000000 0000 00 11123 788775 68888876544 57778888899999999999
Q ss_pred cccc
Q psy8791 134 IQMY 137 (706)
Q Consensus 134 ~~~~ 137 (706)
....
T Consensus 164 ~~s~ 167 (399)
T 2x3n_A 164 IASY 167 (399)
T ss_dssp TTCH
T ss_pred CChH
Confidence 7653
No 232
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.27 E-value=2.3e-06 Score=91.45 Aligned_cols=107 Identities=16% Similarity=0.183 Sum_probs=66.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcccC-c-c--c-c-------cccCcc----ccCcc--cccc-
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHYYQ-P-M--F-T-------LIGGGM----KKLSD--SRRP- 89 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~~~-p-~--~-~-------~~~~~~----~~~~~--~~~~- 89 (706)
..++|+|||||++|+++|..|++. |++|+|||+.+..... . . + + ...... ..... +...
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~--G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 81 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDA--GVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDAL 81 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC--CCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecC
Confidence 357999999999999999999998 8999999998752111 0 0 0 0 000000 00000 0000
Q ss_pred -------------------ccccc-C--CCcEEEE-ceeEEEEcCCC--EEEeCCCeEEEecEEEEccccccc
Q psy8791 90 -------------------MKSVL-P--SGATWVK-DKIVSFDPENN--RVRTQAGSEISYEYMIVASGIQMY 137 (706)
Q Consensus 90 -------------------~~~~~-~--~~v~~i~-~~v~~id~~~~--~v~~~~g~~~~yd~lviAtG~~~~ 137 (706)
+.+.+ . .++++.. .+|++++.+.. +|++.+|.++.+|+||.|+|....
T Consensus 82 ~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 82 TGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp TCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred CCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchh
Confidence 00000 0 2455554 57888876544 567788888999999999997643
No 233
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.23 E-value=2.7e-06 Score=90.97 Aligned_cols=36 Identities=28% Similarity=0.479 Sum_probs=33.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..++|+|||||++|+++|..|++. |.+|+|||+++.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~--G~~v~v~E~~~~ 60 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQN--GIDVSVYERDND 60 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT--TCEEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCCC
Confidence 457999999999999999999998 899999999864
No 234
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.23 E-value=2.2e-06 Score=95.69 Aligned_cols=58 Identities=7% Similarity=0.029 Sum_probs=45.5
Q ss_pred hhHHHHHHHHHHhC-CceEEcCCceEEEeCC-CCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGR-GVDVHKGKALVEIDLA-NKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~-gV~v~~~~~v~~i~~~-~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
..+.+.+.+.+++. ||+++.+ +|+++..+ ++.+..+.+++|+++.+|+||.|+|..+.
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 56788888888888 9999999 99999753 33333334457888999999999998764
No 235
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.23 E-value=2.9e-06 Score=88.71 Aligned_cols=34 Identities=26% Similarity=0.428 Sum_probs=31.4
Q ss_pred CcEEEECCCHHHHHHHHHHHh---hcCCCeEEEEcCCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTS---KLGKGQVSIVEPTDD 66 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~---~~~~~~Vtlie~~~~ 66 (706)
+||+|||||++|+++|+.|++ . |++|+|||+++.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~--G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG--PLYLAVWDKADD 38 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C--CEEEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC--CceEEEEECCCC
Confidence 589999999999999999999 6 899999999864
No 236
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.21 E-value=9.5e-07 Score=98.33 Aligned_cols=49 Identities=16% Similarity=0.233 Sum_probs=38.6
Q ss_pred CCcEEEeceEEEEEcCCCe---EEcCCCcEEeeCEEEEecCcccCccCCCCc
Q psy8791 595 SGATWVKDKIVSFDPENNR---VRTQAGSEISYEYMIVASGIQMYYDRVKGG 643 (706)
Q Consensus 595 ~gv~~~~~~v~~id~~~~~---V~~~~g~~i~yd~lViAtGs~~~~p~i~G~ 643 (706)
.|+++++++|+.+..+... |.+.+|+++.+|.||+|||+.+..+.++|.
T Consensus 131 ~GV~I~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~~~i~~G~ 182 (641)
T 3cp8_A 131 PNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLNGLIHIGM 182 (641)
T ss_dssp TTEEEEECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBTCEEEETT
T ss_pred CCCEEEeeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCCccceeee
Confidence 3899999999998765554 667788899999999999998765544443
No 237
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.20 E-value=1.2e-06 Score=94.32 Aligned_cols=35 Identities=31% Similarity=0.392 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
++||+|||||++|+++|..|+++ |.+|+|||+++.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~--G~~V~v~E~~~~ 39 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKS--GFKVKIVEKQKF 39 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT--TCCEEEECSSCS
T ss_pred cCcEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCCC
Confidence 47999999999999999999998 899999999863
No 238
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.19 E-value=4.6e-07 Score=98.49 Aligned_cols=36 Identities=19% Similarity=0.366 Sum_probs=32.3
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.+||+|||||++|+++|..|++. +.+|+|||+.+..
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~--G~~V~llEk~~~~ 61 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEE--GANVLLLDKGNKL 61 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHC--CCCEEEEECCCCC
Confidence 36999999999999999999987 7899999987653
No 239
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.19 E-value=1.3e-05 Score=89.57 Aligned_cols=70 Identities=9% Similarity=-0.122 Sum_probs=52.5
Q ss_pred CCCchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCC---C--ceEEeecEEEECCCCCchhhhhcCC
Q psy8791 262 LFPSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSED---K--TERLPYAIMHVTPPMGPVPELATSR 331 (706)
Q Consensus 262 ~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~---~--g~~i~~D~vI~a~G~~~~~~~~~~~ 331 (706)
...+..+...+.+.+++.|++++.+++|+++..+++.+..+... + +.++.+|.||.|+|.+........+
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g 240 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDR 240 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTT
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcC
Confidence 34457788888888999999999999999998766654322221 2 3579999999999998876655443
No 240
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.14 E-value=6.1e-06 Score=85.79 Aligned_cols=35 Identities=26% Similarity=0.436 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
+++|+|||||++|+++|..|++. |.+|+|||+++.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~--G~~V~vlE~~~~ 36 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA--GHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHC--CCcEEEEECCCC
Confidence 36899999999999999999998 899999999864
No 241
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.12 E-value=3.1e-06 Score=90.52 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=32.6
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
++||+|||||++|+++|..|++. +.+|+|||+++..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~--G~~V~viE~~~~~ 41 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQ--GHRVVVVEQARRE 41 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC--CCcEEEEeCCCCC
Confidence 57999999999999999999998 8999999987653
No 242
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.11 E-value=1.8e-06 Score=92.60 Aligned_cols=40 Identities=20% Similarity=0.293 Sum_probs=33.0
Q ss_pred cccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 463 VFRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 463 ~~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..++.+||+|||||++|+++|..|++. +.+|+|+|+.+..
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~--G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQS--GIDCDVYEAVKEI 58 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSCC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCCCC
Confidence 344568999999999999999999998 8999999997654
No 243
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.10 E-value=3.7e-06 Score=88.57 Aligned_cols=36 Identities=19% Similarity=0.340 Sum_probs=32.7
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
.++||+|||||.+|+++|..|+++ +.+|+|||+++.
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~--G~~V~vlE~~~~ 38 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAG--GHEVLVAEAAEG 38 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCC
Confidence 457999999999999999999997 889999999753
No 244
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.09 E-value=2.6e-06 Score=91.76 Aligned_cols=36 Identities=28% Similarity=0.277 Sum_probs=32.4
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.+||+|||||++|+++|..|++. +.+|+|+|+++..
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~--G~~V~v~E~~~~~ 40 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKS--GFKVKIVEKQKFP 40 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT--TCCEEEECSSCSS
T ss_pred cCcEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCCCC
Confidence 37999999999999999999987 8899999997643
No 245
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.08 E-value=4.8e-06 Score=89.18 Aligned_cols=35 Identities=20% Similarity=0.335 Sum_probs=32.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
++|+|||||++||++|..|+++ |++|+|+|+.+..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~--G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH--GIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCCEEEEecCCCC
Confidence 6899999999999999999999 9999999997653
No 246
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.08 E-value=2.7e-06 Score=95.08 Aligned_cols=36 Identities=22% Similarity=0.386 Sum_probs=31.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
.+++|+|||||++|+++|..|+++ |++|+|||+.+.
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~--G~~V~VlEr~~~ 83 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAG--GVGALVLEKLVE 83 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHT--TCCEEEEBSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--CCCEEEEcCCCC
Confidence 357999999999999999999999 999999999765
No 247
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.07 E-value=2e-06 Score=94.70 Aligned_cols=37 Identities=24% Similarity=0.242 Sum_probs=33.1
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..+||+|||||++|+++|..|++. +.+|+|||+++..
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~--G~~V~liEk~~~~ 127 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALL--GARVVLVEKRIKF 127 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHHC--CCeEEEEEecccc
Confidence 467999999999999999999998 7899999987653
No 248
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.07 E-value=2.7e-06 Score=88.96 Aligned_cols=37 Identities=27% Similarity=0.378 Sum_probs=31.6
Q ss_pred cccccccCcchhHHHHHHHHHh-hcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTS-RLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~-~~~~~~i~vid~~~~ 503 (706)
|+||+|||||++|+++|..|++ ...+.+|+|+|+++.
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADD 38 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSS
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCC
Confidence 5799999999999999999998 112789999999764
No 249
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.05 E-value=1.2e-05 Score=88.37 Aligned_cols=58 Identities=10% Similarity=0.160 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCc---eEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKT---ERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g---~~i~~D~vI~a~G~~~~ 324 (706)
..+.+.+.+.+++.|++++.++++++++.+++.+++.. .++ .++.+|+||-|.|....
T Consensus 107 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~-~~~~g~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 107 STTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEV-EGPDGPRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEE-ECSSCEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEE-EcCCCcEEEEeCEEEEccCcccH
Confidence 45667777888888999999999999987665555432 233 27999999999999864
No 250
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.05 E-value=3.3e-06 Score=93.19 Aligned_cols=35 Identities=20% Similarity=0.077 Sum_probs=31.9
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
.+||||||||++|+++|..|++. +.+|+|||+.+.
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~--G~kV~VlEr~~~ 141 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQM--GFNPIIVERGKE 141 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHT--TCCCEEECSSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCeEEEEEccCc
Confidence 47999999999999999999997 889999998764
No 251
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.04 E-value=1.3e-05 Score=88.22 Aligned_cols=58 Identities=10% Similarity=0.129 Sum_probs=44.8
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCc---eEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKT---ERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g---~~i~~D~vI~a~G~~~~ 324 (706)
..+.+.+.+.+++.|++++.+++|++++.+++.+++.. .++ .++.+|+||.|.|....
T Consensus 106 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~-~~~~g~~~~~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 106 SVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEV-RGPEGKHTLRAAYLVGCDGGRSS 166 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEE-EETTEEEEEEESEEEECCCTTCH
T ss_pred HHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEE-EcCCCCEEEEeCEEEECCCcchH
Confidence 45667777888888999999999999987666555432 233 37999999999999864
No 252
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.04 E-value=3e-06 Score=85.03 Aligned_cols=36 Identities=25% Similarity=0.422 Sum_probs=33.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
+.+|+|||||+|||+||..|+++ |++|+|||+++..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~--G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAA--GHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCCCC
Confidence 46899999999999999999999 9999999998853
No 253
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.04 E-value=2.9e-06 Score=91.94 Aligned_cols=37 Identities=27% Similarity=0.366 Sum_probs=32.9
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCC-cEEEECCCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKG-QVSIVEPTDD 503 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~-~i~vid~~~~ 503 (706)
+..+||||||||.+|+++|..|+++ +. +|+|+|+++.
T Consensus 4 ~~~~dVvIIGgG~aGlsaA~~La~~--G~~~V~vlE~~~~ 41 (438)
T 3dje_A 4 TKSSSLLIVGAGTWGTSTALHLARR--GYTNVTVLDPYPV 41 (438)
T ss_dssp CTTSCEEEECCSHHHHHHHHHHHHT--TCCCEEEEESSCS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHc--CCCcEEEEeCCCC
Confidence 3457999999999999999999998 77 9999999764
No 254
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.04 E-value=3.9e-06 Score=89.54 Aligned_cols=38 Identities=21% Similarity=0.314 Sum_probs=33.8
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
|.++||+|||||++|+++|..|++. +.+|+|||+++..
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~--G~~V~l~E~~~~~ 39 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKY--GLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSST
T ss_pred CccCCEEEECcCHHHHHHHHHHHHC--CCCEEEEeCCCCC
Confidence 3568999999999999999999998 8899999997743
No 255
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.04 E-value=9.9e-06 Score=86.52 Aligned_cols=38 Identities=26% Similarity=0.422 Sum_probs=33.7
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
+..+||+|||||++|+++|..|++. +.+|+|+|+++..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~--G~~v~v~E~~~~~ 61 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQN--GIDVSVYERDNDR 61 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT--TCEEEEEECSSST
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCCCc
Confidence 3457999999999999999999997 8999999997654
No 256
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.02 E-value=3.2e-05 Score=86.72 Aligned_cols=59 Identities=15% Similarity=0.068 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCC-CEEE-EEeCC-----C---------ceEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLAN-KEAV-FKSED-----K---------TERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~-~~v~-~~~~~-----~---------g~~i~~D~vI~a~G~~~~ 324 (706)
..+.+.+.+.+++.||+++.++++.++..++ +.+. +...+ + |.++.+|+||.|.|..+.
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 3566677778888899999999999997543 3343 22221 2 368999999999999886
No 257
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.02 E-value=6.2e-06 Score=88.10 Aligned_cols=36 Identities=22% Similarity=0.314 Sum_probs=32.7
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
..+||+|||||++|+++|..|++. +.+|+|+|+.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~--G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDA--GVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC--CCCEEEEecCCC
Confidence 357999999999999999999998 899999998765
No 258
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.01 E-value=5.1e-06 Score=88.59 Aligned_cols=35 Identities=14% Similarity=0.271 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
+++|+|||||++|+++|..|++. |++|+|||+.+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKA--GIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHH--TCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCCC
Confidence 46899999999999999999999 899999999873
No 259
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.99 E-value=1.2e-05 Score=89.90 Aligned_cols=40 Identities=20% Similarity=0.275 Sum_probs=34.0
Q ss_pred cccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 463 VFRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 463 ~~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.+|+.+||||||||+||+++|..|++. +.+|+|||+.+..
T Consensus 19 ~~M~~~DVvIVGgG~AGl~aA~~Lar~--G~~V~LiEr~~~~ 58 (591)
T 3i3l_A 19 SHMTRSKVAIIGGGPAGSVAGLTLHKL--GHDVTIYERSAFP 58 (591)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCSS
T ss_pred CcCCCCCEEEECcCHHHHHHHHHHHcC--CCCEEEEcCCCCC
Confidence 344557999999999999999999998 8899999997643
No 260
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.98 E-value=1.2e-05 Score=89.60 Aligned_cols=37 Identities=24% Similarity=0.479 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhc-CCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKL-GKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~-~~~~Vtlie~~~~ 66 (706)
.++|||||||++|+++|..|++.. .|.+|+|||+.+.
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 42 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAI 42 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 579999999999999999999932 2899999999653
No 261
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.98 E-value=6.6e-06 Score=91.01 Aligned_cols=37 Identities=30% Similarity=0.488 Sum_probs=33.0
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..+||+|||||++|+++|..|++. +.+|+|||+++..
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~--G~~V~liE~~~~~ 42 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMR--GHRVLLLEREAFP 42 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT--TCCEEEECSSCSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhC--CCCEEEEccCCCC
Confidence 357999999999999999999987 8899999997643
No 262
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.98 E-value=5.9e-06 Score=89.92 Aligned_cols=35 Identities=26% Similarity=0.462 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
++||+|||||+||+++|..|++. |++|+|||+.+.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~--G~~V~vlE~~~~ 40 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRR--GLKILLVDSKPW 40 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSS--SCCEEEECSSCG
T ss_pred cCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCCC
Confidence 47999999999999999999998 899999999874
No 263
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.97 E-value=8.7e-06 Score=90.66 Aligned_cols=36 Identities=33% Similarity=0.446 Sum_probs=33.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..++|+|||||++||++|..|+++ |.+|+|||+++.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~--G~~v~viEr~~~ 39 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQ--GVRVLVVERRPG 39 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT--TCCEEEECSSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHC--CCCEEEEeCCCC
Confidence 357999999999999999999999 899999999864
No 264
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.96 E-value=1.3e-05 Score=83.34 Aligned_cols=36 Identities=25% Similarity=0.413 Sum_probs=32.2
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
++||+|||||++|+++|..|++. +.+|+|+|+++..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~--G~~V~vlE~~~~~ 37 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA--GHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHC--CCcEEEEECCCCC
Confidence 36999999999999999999998 8899999997643
No 265
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.94 E-value=2.2e-05 Score=86.79 Aligned_cols=58 Identities=5% Similarity=-0.119 Sum_probs=43.5
Q ss_pred hHHHHHHHHHHhCCceEEcCCceEEEeCC-CCEEEEEeC-CCc--eEEeec-EEEECCCCCch
Q psy8791 267 FYAEKIHDILIGRGVDVHKGKALVEIDLA-NKEAVFKSE-DKT--ERLPYA-IMHVTPPMGPV 324 (706)
Q Consensus 267 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~~-~~~v~~~~~-~~g--~~i~~D-~vI~a~G~~~~ 324 (706)
.+.+.+.+.+++.||+++++++++++..+ +++++.+.. +++ .++.+| .||+|+|-...
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~ 265 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAY 265 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhh
Confidence 78888889999999999999999999865 444432221 133 268997 99999987664
No 266
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.94 E-value=1.1e-05 Score=90.61 Aligned_cols=35 Identities=31% Similarity=0.443 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
.+||||||||+|||+||..|+++ |.+|+|||+.+.
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~--G~~V~vlEk~~~ 160 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDS--GAKVILIEKEPV 160 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCCC
Confidence 57999999999999999999998 899999999875
No 267
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.93 E-value=0.00017 Score=77.84 Aligned_cols=58 Identities=10% Similarity=-0.022 Sum_probs=47.9
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeC-CCCEEEEEeCCCceEEeecEEEECCCCC
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDL-ANKEAVFKSEDKTERLPYAIMHVTPPMG 322 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~-~~~~v~~~~~~~g~~i~~D~vI~a~G~~ 322 (706)
...+.+.+.+.+++.|++++++++|++|.. ++++++.+.+.+|+++.||.||.+++..
T Consensus 255 ~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 255 LGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp TTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 367889999999999999999999999986 5555666666678899999999999987
No 268
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.92 E-value=9.9e-06 Score=90.74 Aligned_cols=36 Identities=25% Similarity=0.382 Sum_probs=33.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..+||||||||+|||+||..|++. |.+|+|||+.+.
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~--G~~V~vlEk~~~ 155 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKA--GANVILVDKAPF 155 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHH--TCCEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCCC
Confidence 456999999999999999999999 899999999875
No 269
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.89 E-value=1.3e-05 Score=85.02 Aligned_cols=38 Identities=18% Similarity=0.432 Sum_probs=33.1
Q ss_pred cccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 463 VFRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 463 ~~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
+...++||+|||||.+|+++|..|+++ +.+|+|||+++
T Consensus 13 ~~~~~~dvvIIGgG~~Gl~~A~~La~~--G~~V~llE~~~ 50 (382)
T 1ryi_A 13 AMKRHYEAVVIGGGIIGSAIAYYLAKE--NKNTALFESGT 50 (382)
T ss_dssp -CCSEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHhC--CCcEEEEeCCC
Confidence 334568999999999999999999997 88999999865
No 270
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.88 E-value=8e-06 Score=86.83 Aligned_cols=38 Identities=21% Similarity=0.314 Sum_probs=34.5
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
|+.|||+|||||+||+++|..|++. +.+|+|+|+.+..
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~--G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKY--GLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSST
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCCCC
Confidence 4679999999999999999999998 8999999987654
No 271
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.87 E-value=5.9e-05 Score=76.37 Aligned_cols=122 Identities=8% Similarity=0.003 Sum_probs=77.7
Q ss_pred hHHHHHHHHHHh-CCceEEcCCceEEEeCCCCEEEEEeC-------C--Cc-----eEEeecEEEECCCCCch--h----
Q psy8791 267 FYAEKIHDILIG-RGVDVHKGKALVEIDLANKEAVFKSE-------D--KT-----ERLPYAIMHVTPPMGPV--P---- 325 (706)
Q Consensus 267 ~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~~v~~~~~-------~--~g-----~~i~~D~vI~a~G~~~~--~---- 325 (706)
.+...+.+.+.+ .||+++++++|.++..+++.+..+.. + +| .++++|.||.|+|..++ .
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~~ 199 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 199 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHHH
Confidence 344455666655 69999999999999865554422211 1 22 67999999999997665 1
Q ss_pred hhhcC----CCCCCCCceeeCcc------ccccCCCCCEEEccccCCCC-----CCchHHHHHHhHHHHHHHHHHHHcCC
Q psy8791 326 ELATS----RLVDQSGYVNVDKA------TLQHVKYSNVFAIGDCSNLP-----TSKTAAAVAGQCKVVYDNLSAVMKNR 390 (706)
Q Consensus 326 ~~~~~----~l~~~~G~i~vd~~------~l~~~~~~~Ifa~GD~~~~~-----~~~~~~~a~~qg~~~a~ni~~~l~g~ 390 (706)
.+... ++...+| +.++.. ..+ +.+|++|++||++... ..++...+..+|+.+|.+|...+...
T Consensus 200 ~~~~~g~~~~v~~~~g-~~~~~~~~~~v~~~~-~~~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l~~~ 277 (284)
T 1rp0_A 200 RLKSIGMIDHVPGMKA-LDMNTAEDAIVRLTR-EVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGLP 277 (284)
T ss_dssp HHHHTTSSSCCCCCEE-ECHHHHHHHHHHHCE-EEETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HhhhccCCCCcCCcCC-chhhhhhHHHhhccc-cccCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHHHhhhh
Confidence 12122 2223333 333310 112 4679999999987421 11245578899999999999988643
No 272
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.87 E-value=2.1e-05 Score=86.56 Aligned_cols=39 Identities=26% Similarity=0.308 Sum_probs=34.1
Q ss_pred ccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 464 FRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 464 ~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
+..++||+|||||++|+++|..|++. +.+|+|||+.+..
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~--G~~v~vlE~~~~~ 46 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLA--GVEVVVLERLVER 46 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCCC-
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHC--CCCEEEEeCCCCC
Confidence 44578999999999999999999998 8999999997654
No 273
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.86 E-value=1.5e-05 Score=88.93 Aligned_cols=39 Identities=26% Similarity=0.482 Sum_probs=33.6
Q ss_pred ccccccccCcchhHHHHHHHHHhhc-CCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRL-GKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~-~~~~i~vid~~~~~ 504 (706)
+++||||||||+||+++|..|++.. .+.+|+|||+.+..
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~ 63 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIP 63 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCC
Confidence 4679999999999999999999943 48899999986643
No 274
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.85 E-value=0.00016 Score=80.95 Aligned_cols=58 Identities=16% Similarity=0.133 Sum_probs=43.8
Q ss_pred hhHHHHHHHHHHhCCceEEcCCceEEEeCCC-CEE---EEEeCCCce--EEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGRGVDVHKGKALVEIDLAN-KEA---VFKSEDKTE--RLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~-~~v---~~~~~~~g~--~i~~D~vI~a~G~~~~ 324 (706)
..+...+.+.+++.||+++++++|+++..++ +.+ .+.. .+|+ ++.+|.||+|+|..+.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~-~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKG-EYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEE-TTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEe-CCCcEEEEEcCEEEEeCCCCcc
Confidence 4677888888999999999999999996544 433 3322 2454 6899999999997765
No 275
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.85 E-value=2e-05 Score=87.67 Aligned_cols=38 Identities=24% Similarity=0.455 Sum_probs=32.7
Q ss_pred ccccccccCcchhHHHHHHHHHhhc-CCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRL-GKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~-~~~~i~vid~~~~ 503 (706)
+++||||||||++|+++|..|++.. .+.+|+|||+.+.
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 42 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAI 42 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 5689999999999999999999932 3789999998653
No 276
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.83 E-value=1.6e-05 Score=88.76 Aligned_cols=36 Identities=22% Similarity=0.312 Sum_probs=31.5
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.+||+|||||++|+++|..|++. +.+|+|||+.+..
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~--G~~V~VlEr~~~~ 84 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAG--GVGALVLEKLVEP 84 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHT--TCCEEEEBSCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCCEEEEcCCCCC
Confidence 46999999999999999999998 8999999997654
No 277
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.81 E-value=2.2e-05 Score=83.16 Aligned_cols=35 Identities=26% Similarity=0.506 Sum_probs=31.9
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
.++||+|||||.+|+++|..|+++ +.+|+|||++.
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~--G~~V~lle~~~ 38 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKR--GEEVTVIEKRF 38 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCC
Confidence 367999999999999999999998 78999999874
No 278
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.80 E-value=3.2e-06 Score=87.69 Aligned_cols=39 Identities=23% Similarity=0.270 Sum_probs=33.4
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..+||+|||||+||++||.+|+++..+.+|+|||+++..
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~ 102 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 356999999999999999999865558999999997653
No 279
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.80 E-value=7.9e-06 Score=87.39 Aligned_cols=35 Identities=23% Similarity=0.347 Sum_probs=32.0
Q ss_pred ccccccccCcchhHHHHHHHHHh-hcCC-CcEEEECCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTS-RLGK-GQVSIVEPTD 502 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~-~~~~-~~i~vid~~~ 502 (706)
.++||+|||||.+|+++|..|++ + + .+|+|||+++
T Consensus 20 ~~~dVvIIG~G~~Gl~~A~~La~~~--G~~~V~vlE~~~ 56 (405)
T 2gag_B 20 KSYDAIIVGGGGHGLATAYFLAKNH--GITNVAVLEKGW 56 (405)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHH--CCCCEEEECSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHhc--CCCcEEEEeCCC
Confidence 36799999999999999999999 7 7 8999999976
No 280
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.79 E-value=3.3e-05 Score=84.96 Aligned_cols=37 Identities=24% Similarity=0.279 Sum_probs=33.4
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..+||+|||||++|+++|..|++. +.+|+|||+.+..
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~--G~~v~vlE~~~~~ 47 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLG--GVDVMVLEQLPQR 47 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESCSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCCCC
Confidence 467999999999999999999998 8999999997654
No 281
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.77 E-value=6.2e-05 Score=83.46 Aligned_cols=43 Identities=21% Similarity=0.347 Sum_probs=33.3
Q ss_pred CCcEEEEceeEEEEcCC--C--EEEeCCCeEEEecEEEEcccccccc
Q psy8791 96 SGATWVKDKIVSFDPEN--N--RVRTQAGSEISYEYMIVASGIQMYY 138 (706)
Q Consensus 96 ~~v~~i~~~v~~id~~~--~--~v~~~~g~~~~yd~lviAtG~~~~~ 138 (706)
.++++..++|++++.+. . .|.+.+|.++.+|+||.|+|.....
T Consensus 189 ~Gv~i~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 189 LGVTHIRDHVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp SCCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCC
T ss_pred CCCEEEEeEEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 57888888899987643 2 4666777779999999999986543
No 282
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.72 E-value=1.3e-05 Score=84.78 Aligned_cols=38 Identities=24% Similarity=0.309 Sum_probs=33.0
Q ss_pred ccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 464 FRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 464 ~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
...++||+|||||.+|+++|..|+ + +.+|+|+|+++..
T Consensus 6 ~~~~~dv~IIGaGi~Gls~A~~La-~--G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 6 HPIEADYLVIGAGIAGASTGYWLS-A--HGRVVVLEREAQP 43 (381)
T ss_dssp EEEECSEEEECCSHHHHHHHHHHT-T--TSCEEEECSSSST
T ss_pred CCCcCCEEEECCcHHHHHHHHHHh-C--CCCEEEEECCCCc
Confidence 345789999999999999999999 5 7899999997643
No 283
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.72 E-value=1.9e-05 Score=90.53 Aligned_cols=36 Identities=19% Similarity=0.296 Sum_probs=32.2
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.+||||||||.+|+++|..|+++ +.+|+|||+++..
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~--G~~V~vlEk~~~~ 307 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRR--GWQVTLYCADEAP 307 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCcc
Confidence 47999999999999999999998 8899999986543
No 284
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.72 E-value=1.8e-05 Score=90.86 Aligned_cols=37 Identities=16% Similarity=0.289 Sum_probs=32.7
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..+||||||||.+|+++|..|+++ +.+|+|||+++..
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~--G~~V~vlEk~~~~ 299 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRR--GAVVTLYCADAQP 299 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTT--TCCEEEEESSSST
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC--CCcEEEEeCCCcc
Confidence 357999999999999999999998 8899999996543
No 285
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.71 E-value=2.5e-05 Score=84.90 Aligned_cols=35 Identities=26% Similarity=0.439 Sum_probs=32.1
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
.+||+|||||+||+++|..|++. +.+|+|+|+.+.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~--G~~V~vlE~~~~ 40 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRR--GLKILLVDSKPW 40 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSS--SCCEEEECSSCG
T ss_pred cCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCCC
Confidence 47999999999999999999987 899999999764
No 286
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.70 E-value=2.3e-05 Score=84.09 Aligned_cols=38 Identities=18% Similarity=0.294 Sum_probs=32.7
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCc-EEEECCCCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQ-VSIVEPTDDH 504 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~-i~vid~~~~~ 504 (706)
|..+||+|||||++|+++|..|++. +.+ |+|+|+.+..
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~--G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQA--GIGKVTLLESSSEI 40 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhC--CCCeEEEEECCCCc
Confidence 3457999999999999999999998 889 9999997653
No 287
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.68 E-value=0.00011 Score=83.50 Aligned_cols=59 Identities=5% Similarity=0.030 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHHhCCc--eEEcCCceEEEeCCCC----EEEEEeC-----CCc--eEEeecEEEECCCCCch
Q psy8791 266 PFYAEKIHDILIGRGV--DVHKGKALVEIDLANK----EAVFKSE-----DKT--ERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 266 ~~~~~~~~~~l~~~gV--~v~~~~~v~~i~~~~~----~v~~~~~-----~~g--~~i~~D~vI~a~G~~~~ 324 (706)
..+.+.+.+.+++.|+ +++.++++++++.+++ .+.+... .+| +++.+|+||.|.|....
T Consensus 141 ~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 141 ARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSN 212 (639)
T ss_dssp HHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchH
Confidence 4566777788888877 9999999999975531 2433211 134 67999999999999875
No 288
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.65 E-value=2.7e-05 Score=82.21 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=31.8
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
++||+|||||.+|+++|..|+++ +.+|+|||+.+.
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~--G~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRA--GLNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHT--TCCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCC
Confidence 36999999999999999999998 789999998754
No 289
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.65 E-value=4.9e-05 Score=84.27 Aligned_cols=43 Identities=21% Similarity=0.347 Sum_probs=34.1
Q ss_pred CCcEEEeceEEEEEcCC--C--eEEcCCCcEEeeCEEEEecCcccCc
Q psy8791 595 SGATWVKDKIVSFDPEN--N--RVRTQAGSEISYEYMIVASGIQMYY 637 (706)
Q Consensus 595 ~gv~~~~~~v~~id~~~--~--~V~~~~g~~i~yd~lViAtGs~~~~ 637 (706)
.|++++.++|++++.+. . .|++.+|.++.+|+||.|+|.....
T Consensus 189 ~Gv~i~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 189 LGVTHIRDHVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp SCCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCC
T ss_pred CCCEEEEeEEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 58999877899997653 2 4667787789999999999987654
No 290
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.64 E-value=2.9e-05 Score=86.42 Aligned_cols=36 Identities=28% Similarity=0.276 Sum_probs=32.7
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.+||+|||||++|+++|..|++. +.+|+|||+++..
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~--G~~v~viEr~~~~ 40 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQ--GVRVLVVERRPGL 40 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT--TCCEEEECSSSSC
T ss_pred cCcEEEECcCHHHHHHHHHHHHC--CCCEEEEeCCCCC
Confidence 47999999999999999999998 8899999997654
No 291
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.62 E-value=4.4e-05 Score=84.42 Aligned_cols=37 Identities=27% Similarity=0.442 Sum_probs=29.9
Q ss_pred cccccccCcchhHHHHHHHHHhhc-CCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRL-GKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~-~~~~i~vid~~~~ 503 (706)
++||||||||.+|+++|..|++.. .+.+|+|||+.+.
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 468999999999999999999922 2789999998653
No 292
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.61 E-value=6.3e-05 Score=80.34 Aligned_cols=36 Identities=25% Similarity=0.482 Sum_probs=32.3
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCCc
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDHY 505 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~~ 505 (706)
++|+|||||++|+++|..|++. +.+|+|+|+++...
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~--G~~v~v~Er~~~~~ 37 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH--GIKVTIYERNSAAS 37 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCCEEEEecCCCCC
Confidence 3799999999999999999998 89999999876543
No 293
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.58 E-value=5.4e-05 Score=82.57 Aligned_cols=31 Identities=19% Similarity=0.390 Sum_probs=29.1
Q ss_pred cccccCcchhHHHHHHHHHhhcCCCcEEEECCC
Q psy8791 469 HLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPT 501 (706)
Q Consensus 469 ~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~ 501 (706)
||||||+|.||+++|..|++. +.+|+|||+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~--G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRA--GKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--TCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCCEEEEeCC
Confidence 689999999999999999987 7899999997
No 294
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.55 E-value=7.5e-05 Score=83.72 Aligned_cols=38 Identities=26% Similarity=0.307 Sum_probs=32.9
Q ss_pred cccccccCcchhHHHHHHHHHhh----cCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSR----LGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~----~~~~~i~vid~~~~~ 504 (706)
.+||||||||+||+++|..|++. .++.+|+|||+.+..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~ 76 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHI 76 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCC
Confidence 37999999999999999999986 337899999997654
No 295
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.54 E-value=4.3e-05 Score=84.47 Aligned_cols=54 Identities=9% Similarity=0.076 Sum_probs=46.0
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCC
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPM 321 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~ 321 (706)
...+.+.+.+.|.+.|++++++++|++|..+++.++. .+|+++.||.||.+++.
T Consensus 221 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~v~~---~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 221 TGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTL---QDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHHHHHHTSCGGGEEESGGGCEEEEETTTTEEEE---TTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHHHHHHhcCeeeecceEEEEEEccCCEEEE---cCCCEEECCEEEECCCH
Confidence 4567778888888899999999999999998877654 38999999999999764
No 296
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.53 E-value=0.00011 Score=82.32 Aligned_cols=37 Identities=30% Similarity=0.340 Sum_probs=33.1
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..+||||||||.||+++|..|++. +.+|+|+|+.+..
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~--G~~V~vlEk~~~~ 161 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDS--GAKVILIEKEPVI 161 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCCCC
Confidence 357999999999999999999998 7899999997653
No 297
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.50 E-value=0.00011 Score=78.26 Aligned_cols=34 Identities=15% Similarity=0.273 Sum_probs=31.4
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
+||+|||||++|+++|..|++. +.+|+|+|+.+.
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~ 36 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA--GIDNVILERQTP 36 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH--TCCEEEECSSCH
T ss_pred ccEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCCC
Confidence 6899999999999999999998 899999998763
No 298
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.48 E-value=0.00025 Score=77.95 Aligned_cols=35 Identities=34% Similarity=0.482 Sum_probs=31.8
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
+++||+|||||.+|+++|..|+++ +.+|+|+|+++
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~--G~~V~llE~~~ 36 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGR--GLSVLMLEAQD 36 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC--CCCEEEEECCC
Confidence 468999999999999999999998 88999999965
No 299
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.46 E-value=0.00015 Score=74.44 Aligned_cols=39 Identities=23% Similarity=0.254 Sum_probs=33.8
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..+||+|||||++|+++|..|+++.++.+|+|||+++..
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~ 116 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAP 116 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCcc
Confidence 357999999999999999999986567899999987653
No 300
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.46 E-value=0.00015 Score=81.17 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=33.2
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..+||||||||.||+++|..|++. +.+|+|||+.+..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~--G~~V~vlEk~~~~ 156 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKA--GANVILVDKAPFS 156 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHH--TCCEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCCCC
Confidence 357999999999999999999998 7899999997654
No 301
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.41 E-value=0.00012 Score=78.66 Aligned_cols=37 Identities=22% Similarity=0.415 Sum_probs=33.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCC-CeEEEEcCCCCc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGK-GQVSIVEPTDDH 67 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~-~~Vtlie~~~~~ 67 (706)
.+++|+|||||++||+||++|++. | ++|+|+|++++.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~--g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA--GFHDYTILERTDHV 42 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT--TCCCEEEECSSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC--CCCcEEEEECCCCC
Confidence 457999999999999999999998 8 899999998864
No 302
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.37 E-value=0.00015 Score=76.07 Aligned_cols=38 Identities=26% Similarity=0.434 Sum_probs=34.3
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCC-CC
Q psy8791 27 SSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPT-DD 66 (706)
Q Consensus 27 ~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~-~~ 66 (706)
+...++|+|||||++||+||+.|++. |++|+|+|++ +.
T Consensus 41 ~~~~~~V~IIGAGiaGL~aA~~L~~~--G~~V~VlE~~~~~ 79 (376)
T 2e1m_A 41 PGPPKRILIVGAGIAGLVAGDLLTRA--GHDVTILEANANR 79 (376)
T ss_dssp CCSCCEEEEECCBHHHHHHHHHHHHT--SCEEEEECSCSSC
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHC--CCcEEEEeccccc
Confidence 34567999999999999999999999 8999999999 64
No 303
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.35 E-value=0.00015 Score=78.75 Aligned_cols=59 Identities=8% Similarity=-0.062 Sum_probs=48.5
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCC--CCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLA--NKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~--~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
...+.+.+.+.+++.|++++++++|++|..+ +++++.+.+ +|+++.||.||+|+|..+.
T Consensus 241 ~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 241 LGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp TTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 4678889999999999999999999999765 555544444 5788999999999998764
No 304
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.35 E-value=0.00012 Score=80.17 Aligned_cols=56 Identities=18% Similarity=0.245 Sum_probs=44.6
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCE-EEEEeCCCceEEeecEEEECCCCC
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKE-AVFKSEDKTERLPYAIMHVTPPMG 322 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~-v~~~~~~~g~~i~~D~vI~a~G~~ 322 (706)
...+.+.+.+.+++.|++|+++++|++|+.+++. +.+ .+ ++.++.||.||+|++..
T Consensus 233 ~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v-~~-~~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 233 LEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKV-SL-RDSSLEADHVISAIPAS 289 (477)
T ss_dssp TTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEE-EC-SSCEEEESEEEECSCHH
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEE-EE-CCeEEEcCEEEECCCHH
Confidence 3578888999999999999999999999865543 333 33 45689999999998754
No 305
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.35 E-value=0.0002 Score=83.95 Aligned_cols=36 Identities=14% Similarity=0.355 Sum_probs=31.8
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCC-cEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKG-QVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~-~i~vid~~~~ 503 (706)
.++||||||||.+|+++|..|+++ +. +|+|||+++.
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~--G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTR--GWNNITVLDQGPL 39 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT--TCCCEEEECSSCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC--CCCcEEEEeCCCC
Confidence 467999999999999999999998 66 8999998764
No 306
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.35 E-value=0.00033 Score=77.92 Aligned_cols=37 Identities=27% Similarity=0.408 Sum_probs=33.1
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..+||+|||||++|+++|..|++. +.+|+|||+.+..
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~--G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHR--QVGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSCSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--CCCEEEEeCCCCC
Confidence 357999999999999999999998 8999999997654
No 307
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.35 E-value=8.4e-05 Score=81.03 Aligned_cols=38 Identities=18% Similarity=0.357 Sum_probs=33.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhc----CCCeEEEEcCCCCc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKL----GKGQVSIVEPTDDH 67 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~----~~~~Vtlie~~~~~ 67 (706)
+++|+|||||++||+||++|+++. ++++|+|+|+++..
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCC
Confidence 479999999999999999999992 23999999998763
No 308
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.34 E-value=0.00016 Score=75.90 Aligned_cols=35 Identities=26% Similarity=0.301 Sum_probs=32.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
.++||+|||||++|+++|++|+++ |.+|+|||++.
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~--G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARK--GYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC--CCEEEEEeccC
Confidence 457999999999999999999998 89999999976
No 309
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.32 E-value=0.00012 Score=78.96 Aligned_cols=35 Identities=17% Similarity=0.298 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
.+++|+|||||++|+++|..|+++ |++|+|||+.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~--G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQH--DVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHT--TCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC--CCeEEEEcCCC
Confidence 347999999999999999999999 99999999987
No 310
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.32 E-value=0.00017 Score=76.45 Aligned_cols=37 Identities=32% Similarity=0.520 Sum_probs=33.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
++|+|||||++|+++|..|++..+|.+|+|+|+++..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999998678999999998753
No 311
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.31 E-value=0.00012 Score=73.07 Aligned_cols=35 Identities=26% Similarity=0.431 Sum_probs=32.4
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
+||+|||||+||++||..|+++ +.+|+|+|+++..
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~--G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAA--GHQVHLFDKSRGS 37 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCCCC
Confidence 5899999999999999999998 8999999997754
No 312
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.25 E-value=0.00021 Score=73.40 Aligned_cols=37 Identities=24% Similarity=0.362 Sum_probs=33.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
.+||+|||||++|+++|..|+++.++++|+|||+++.
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~ 115 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVA 115 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSS
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCc
Confidence 5799999999999999999999756899999999874
No 313
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.25 E-value=0.00023 Score=78.14 Aligned_cols=37 Identities=27% Similarity=0.417 Sum_probs=33.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
..++|+|||||++||+||+.|++. |++|+|+|+++..
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~--g~~v~v~E~~~~~ 46 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKA--GYKVTVLEARTRP 46 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC--CCCEEEEeccCCC
Confidence 357999999999999999999998 8999999999863
No 314
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.23 E-value=0.00013 Score=82.67 Aligned_cols=37 Identities=27% Similarity=0.417 Sum_probs=33.0
Q ss_pred ccccccccCcchhHHHHHHHHHh-hcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTS-RLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~-~~~~~~i~vid~~~~~ 504 (706)
..+||+|||||++|+++|..|++ . +.+|+|||+.+..
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~--G~~V~viEr~~~~ 68 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFP--DIRTCIVEQKEGP 68 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCT--TSCEEEECSSSSC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhC--CCCEEEEeCCCCC
Confidence 35799999999999999999998 7 8999999997654
No 315
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.23 E-value=0.00097 Score=68.08 Aligned_cols=38 Identities=24% Similarity=0.279 Sum_probs=33.6
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.+||+|||+|++|+++|..|.+..++.+|+|+|+++..
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ 102 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccc
Confidence 56999999999999999999987667899999987653
No 316
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.22 E-value=0.00015 Score=80.28 Aligned_cols=36 Identities=22% Similarity=0.419 Sum_probs=33.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCC-CeEEEEcCCCCc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGK-GQVSIVEPTDDH 67 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~-~~Vtlie~~~~~ 67 (706)
.++|+|||||+|||+||+.|++. | ++|+|+|+++..
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~--G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQN--GIQDCLVLEARDRV 44 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHT--TCCSEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc--CCCCEEEEeCCCCC
Confidence 46899999999999999999998 8 999999999863
No 317
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.22 E-value=0.00018 Score=75.11 Aligned_cols=63 Identities=13% Similarity=0.110 Sum_probs=44.5
Q ss_pred CchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhhcCCCCCCCCce
Q psy8791 264 PSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELATSRLVDQSGYV 339 (706)
Q Consensus 264 ~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~~~~l~~~~G~i 339 (706)
.+..+...+.+.+++.|++++. ++|++++.+ ..+.+|.||.|+|.....++....+...+|++
T Consensus 140 ~p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~------------~~~~a~~VV~A~G~~s~~l~~~~~l~p~rg~~ 202 (351)
T 3g3e_A 140 EGKNYLQWLTERLTERGVKFFQ-RKVESFEEV------------AREGADVIVNCTGVWAGALQRDPLLQPGRGQI 202 (351)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEE-CCCCCHHHH------------HHTTCSEEEECCGGGGGGTSCCTTCEEEEEEE
T ss_pred cHHHHHHHHHHHHHHCCCEEEE-EEeCCHHHh------------hcCCCCEEEECCCcChHhhcCCCceeecCCcE
Confidence 3567888888999999999988 777766432 12679999999999887655433333334443
No 318
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.22 E-value=0.00024 Score=75.07 Aligned_cols=38 Identities=32% Similarity=0.465 Sum_probs=34.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
...++|+|||||++|++||.+|++. +.+|+|+|+++..
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~--g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASS--GQRVLIVDRRPHI 64 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHC--CCceEEEeccCCC
Confidence 3467999999999999999999998 8999999998863
No 319
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.20 E-value=0.00026 Score=78.84 Aligned_cols=36 Identities=33% Similarity=0.439 Sum_probs=32.5
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
..+||+|||||.+|+++|..|+++ +.+|+|+|+++.
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~--G~~V~LlEk~d~ 52 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVR--GIQTGLVEMNDF 52 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTT--TCCEEEEESSST
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC--CCcEEEEECCCC
Confidence 358999999999999999999998 899999999753
No 320
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.19 E-value=0.00024 Score=76.04 Aligned_cols=35 Identities=23% Similarity=0.415 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCe-EEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQ-VSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~-Vtlie~~~~ 66 (706)
.++|+|||||++|+++|..|++. |.+ |+|||+.+.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~--G~~~v~v~E~~~~ 39 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQA--GIGKVTLLESSSE 39 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhC--CCCeEEEEECCCC
Confidence 47999999999999999999998 899 999999875
No 321
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.16 E-value=0.00025 Score=77.49 Aligned_cols=38 Identities=24% Similarity=0.401 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHY 68 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~ 68 (706)
.+++|+|||||++||+||..|++. |++|+|+|+++...
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~--g~~v~v~E~~~~~G 52 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSR--GTDAVLLESSARLG 52 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTT--TCCEEEECSSSSSB
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCCEEEEEcCCCCC
Confidence 457999999999999999999998 89999999998643
No 322
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.15 E-value=0.00026 Score=75.60 Aligned_cols=67 Identities=10% Similarity=0.095 Sum_probs=47.9
Q ss_pred CchhHHHHHHHHHHhCCceEEcCCceE---------EEeCCCCEEEEEeCCCceEEeecEEEECCCCCchhhhh-cCCC
Q psy8791 264 PSPFYAEKIHDILIGRGVDVHKGKALV---------EIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPVPELA-TSRL 332 (706)
Q Consensus 264 ~~~~~~~~~~~~l~~~gV~v~~~~~v~---------~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~~~-~~~l 332 (706)
.+..+...+.+.+++.|++++.+++|+ ++..+++.+. +.+++| ++.+|.||.|+|.....++. ..++
T Consensus 170 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~-v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~g~ 246 (405)
T 3c4n_A 170 RPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQI-VVHETR-QIRAGVIIVAAGAAGPALVEQGLGL 246 (405)
T ss_dssp CHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC--------CBCCE-EEEEEEEEECCGGGHHHHHHHHHCC
T ss_pred cHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEE-EEECCc-EEECCEEEECCCccHHHHHHHhcCC
Confidence 346788888899999999999999999 8876555553 334455 79999999999998766655 4443
No 323
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.15 E-value=0.00036 Score=74.26 Aligned_cols=38 Identities=24% Similarity=0.362 Sum_probs=33.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
.++||+|||||++||+||+.|++. +|++|+|+|++++.
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~-~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQ-LDKRVLVLERRPHI 43 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHH-SCCCEEEECSSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHh-CCCCEEEEeCCCCC
Confidence 357999999999999999999987 36899999999864
No 324
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.11 E-value=0.00037 Score=76.05 Aligned_cols=38 Identities=24% Similarity=0.390 Sum_probs=33.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
+++|+|||||++||+||++|++..++.+|+|+|+++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERL 41 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCC
Confidence 57999999999999999999999333999999998763
No 325
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.10 E-value=0.00027 Score=76.70 Aligned_cols=37 Identities=22% Similarity=0.342 Sum_probs=33.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHY 68 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~ 68 (706)
+++|+|||||++||+||.+|++. |++|+|+|+++...
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~--g~~v~v~E~~~~~G 41 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKA--GLSVAVIEARDRVG 41 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHHC--CCcEEEEECCCCCC
Confidence 46899999999999999999998 89999999998643
No 326
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.08 E-value=0.00036 Score=71.28 Aligned_cols=36 Identities=25% Similarity=0.389 Sum_probs=33.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
+||+|||||++|++||..|++..++++|+|+|+++.
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~ 101 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcc
Confidence 489999999999999999999766799999999884
No 327
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.07 E-value=0.00036 Score=73.35 Aligned_cols=34 Identities=21% Similarity=0.414 Sum_probs=32.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
++|+|||||++|++||.+|++. |++|+|+|+++.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~--g~~v~v~E~~~~ 35 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKL--NKKVLVIEKRNH 35 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGG--TCCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhC--CCcEEEEecCCC
Confidence 5899999999999999999998 899999999885
No 328
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.06 E-value=0.00044 Score=71.61 Aligned_cols=45 Identities=13% Similarity=0.003 Sum_probs=39.2
Q ss_pred ccccCCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCCCC
Q psy8791 345 TLQHVKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNRAL 392 (706)
Q Consensus 345 ~l~~~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~~~ 392 (706)
+|+.+..+|+|++|+..... -...|..||-.++.|++..+.|++.
T Consensus 322 tle~k~~~~Lf~AGqi~G~~---Gy~eAaa~Gl~AG~naa~~~~g~~p 366 (443)
T 3g5s_A 322 TLEFREAEGLYAAGVLAGVE---GYLESAATGFLAGLNAARKALGLPP 366 (443)
T ss_dssp TSEETTEEEEEECGGGGTBC---SHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred hceecCCCCEEECccccccH---HHHHHHHhHHHHHHHHHHHhcCCCC
Confidence 78988899999999998873 3457889999999999999999876
No 329
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.06 E-value=0.00039 Score=76.50 Aligned_cols=37 Identities=22% Similarity=0.357 Sum_probs=33.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
..++|+|||||++||+||+.|++. |++|+|+|+++..
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~--g~~v~v~E~~~~~ 48 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIH--GLNVTVFEAEGKA 48 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTT--SCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--CCcEEEEEeCCCC
Confidence 457999999999999999999998 8999999999864
No 330
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.04 E-value=0.00037 Score=76.50 Aligned_cols=57 Identities=12% Similarity=0.141 Sum_probs=46.3
Q ss_pred chhHHHHHHHHHHhCC-ceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCC
Q psy8791 265 SPFYAEKIHDILIGRG-VDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMG 322 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~g-V~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~ 322 (706)
...+.+.+.+.+++.| ++++++++|++|+.+++.+.+. +++|+++.+|.||+|+|..
T Consensus 254 ~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~-~~~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 254 QSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVT-ARDGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEE-ETTCCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEE-ECCCCEEEcCEEEECCCHH
Confidence 4678888888999998 9999999999998655555543 3467789999999999863
No 331
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.02 E-value=0.00056 Score=75.16 Aligned_cols=38 Identities=29% Similarity=0.453 Sum_probs=34.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
...++|+|||||++||+||..|++. |++|+|+|+++..
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~--g~~v~vlE~~~~~ 68 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGA--GHQVTVLEASERP 68 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHH--TCEEEEECSSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC--CCeEEEEECCCCC
Confidence 3457999999999999999999999 8999999999864
No 332
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.97 E-value=0.0011 Score=74.15 Aligned_cols=36 Identities=19% Similarity=0.267 Sum_probs=32.4
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.+||+|||+|.+|+++|..|++. +.+|+|+|+.+..
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~--g~~v~~~e~~~~~ 161 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDA--GAKVILLEKEPIP 161 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSS--SCCEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCCC
Confidence 56999999999999999999987 7899999997654
No 333
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.96 E-value=0.00039 Score=76.72 Aligned_cols=59 Identities=8% Similarity=-0.004 Sum_probs=45.8
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCC-CCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLA-NKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~-~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
...+.+.+.+.+++.||+++.+ +|++++.+ ++.+..+.+++|+++.+|+||.|+|.+..
T Consensus 172 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 172 ADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 3567788888888899999999 99999753 33333334457778999999999998764
No 334
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=96.96 E-value=0.0005 Score=73.96 Aligned_cols=35 Identities=31% Similarity=0.473 Sum_probs=32.2
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
|+||||||||.+|+++|..|++. +.+|+|+|+++.
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~--G~~V~vlE~~~~ 35 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNA--GKKVLLLEGGER 35 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHT--TCCEEEECSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHc--CCeEEEEecCCC
Confidence 57999999999999999999998 889999998664
No 335
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=96.96 E-value=0.00061 Score=72.08 Aligned_cols=36 Identities=33% Similarity=0.557 Sum_probs=33.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
+++|+|||||++|+++|..|++. +++|+|+|+++..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~--g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK--GHQVHIIDQRDHI 38 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEEESSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC--CCcEEEEEecCCc
Confidence 36999999999999999999998 8999999998863
No 336
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=96.94 E-value=0.00035 Score=76.86 Aligned_cols=36 Identities=25% Similarity=0.363 Sum_probs=31.5
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
|++|||||||.+||+||..|++. +.+|+|+|+++..
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~--G~~V~VlEa~~~~ 36 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAA--GIPVLLLEQRDKP 36 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHT--TCCEEEECCC---
T ss_pred CCCEEEECCcHHHHHHHHHHHHC--CCcEEEEccCCCC
Confidence 77999999999999999999998 8999999997753
No 337
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=96.94 E-value=0.00054 Score=76.25 Aligned_cols=35 Identities=29% Similarity=0.551 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
.++|+|||||++||++|..|++. |.+|+|||+.+.
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~--G~~V~vlEr~~~ 60 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHR--QVGHLVVEQTDG 60 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCCEEEEeCCCC
Confidence 46899999999999999999998 899999999875
No 338
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=96.94 E-value=0.00053 Score=75.37 Aligned_cols=64 Identities=6% Similarity=-0.104 Sum_probs=48.7
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCE--EEEEeCCCce--EEeecEEEECCCCCchhhhh
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKE--AVFKSEDKTE--RLPYAIMHVTPPMGPVPELA 328 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~--v~~~~~~~g~--~i~~D~vI~a~G~~~~~~~~ 328 (706)
+..+...+.+.+++.|++++.+++|+++..+++. +......+|+ ++.+|.||.|+|.+......
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~ 215 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFD 215 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHH
Confidence 5677888888899999999999999999765542 3222213454 79999999999999876544
No 339
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=96.85 E-value=0.00081 Score=73.51 Aligned_cols=37 Identities=22% Similarity=0.359 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCC-CeEEEEcCCCCc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGK-GQVSIVEPTDDH 67 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~-~~Vtlie~~~~~ 67 (706)
..++|+|||||++||+||++|++. + .+|+|+|+++..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~--g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTEL--GYKNWHLYECNDTP 45 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHT--TCCSEEEEESSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHc--CCCCEEEEeCCCCC
Confidence 357999999999999999999998 6 799999999863
No 340
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.81 E-value=0.00094 Score=75.91 Aligned_cols=36 Identities=22% Similarity=0.339 Sum_probs=32.4
Q ss_pred cccccccCcchhHHHHHHHHHh-----hcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTS-----RLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~-----~~~~~~i~vid~~~~~ 504 (706)
.+||+|||||++|+++|..|++ . +.+|+|||+.+..
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~--Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKP--DLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHST--TCCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccC--CCCEEEEeCCCCC
Confidence 5799999999999999999998 6 8999999987653
No 341
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.80 E-value=0.00082 Score=75.04 Aligned_cols=66 Identities=8% Similarity=-0.151 Sum_probs=49.2
Q ss_pred CchhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEe-----CCCceEEeecEEEECCCCCchhhhhc
Q psy8791 264 PSPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKS-----EDKTERLPYAIMHVTPPMGPVPELAT 329 (706)
Q Consensus 264 ~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~-----~~~g~~i~~D~vI~a~G~~~~~~~~~ 329 (706)
.+..+...+.+.+++.|++++.+++|+++..+++.+..+. ++++.++.+|.||.|+|.+.......
T Consensus 186 ~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~ 256 (571)
T 2rgh_A 186 NDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNL 256 (571)
T ss_dssp CHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTT
T ss_pred chHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHh
Confidence 3566777777888899999999999999986655543222 22334799999999999987765543
No 342
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=96.73 E-value=0.0012 Score=71.01 Aligned_cols=59 Identities=14% Similarity=0.011 Sum_probs=48.9
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCCCch
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPMGPV 324 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~~~~ 324 (706)
...+.+.+.+.+++.|++++++++|++|..+++.++.+.. +|+++.||.||+|+|..+.
T Consensus 233 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~-~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 233 LGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKS-EGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp TTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEE-TTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEE-CCeEEECCEEEECCCCCcc
Confidence 3578888889999999999999999999876666654443 6889999999999988764
No 343
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=96.70 E-value=0.00084 Score=75.14 Aligned_cols=35 Identities=17% Similarity=0.305 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
.+||||||||.|||+||..|++. |.+|+|||+.+.
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~--G~~V~vlEK~~~ 41 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQS--GQTCALLSKVFP 41 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCG
T ss_pred cCCEEEECcCHHHHHHHHHHHHC--CCcEEEEecCCC
Confidence 46999999999999999999998 899999999753
No 344
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.66 E-value=0.0018 Score=73.73 Aligned_cols=38 Identities=24% Similarity=0.476 Sum_probs=34.6
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 27 SSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 27 ~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
....++|+|||||++||+||..|++. |++|+|+|+++.
T Consensus 104 ~~~~~~v~viG~G~~gl~~a~~l~~~--g~~v~~~e~~~~ 141 (662)
T 2z3y_A 104 TKKTGKVIIIGSGVSGLAAARQLQSF--GMDVTLLEARDR 141 (662)
T ss_dssp SSCCCEEEEECCBHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHC--CCeEEEEecCCC
Confidence 34568999999999999999999998 899999999985
No 345
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.65 E-value=0.0012 Score=74.63 Aligned_cols=35 Identities=29% Similarity=0.368 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
.+||||||||.|||+||..|++. |.+|+|||+.+.
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~--G~~V~vlEK~~~ 39 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQK--GLSTIVLSLIPV 39 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTT--TCCEEEECSSCG
T ss_pred cccEEEECchHHHHHHHHHHHHC--CCcEEEEeccCC
Confidence 46999999999999999999998 899999999753
No 346
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.63 E-value=0.0011 Score=74.38 Aligned_cols=34 Identities=24% Similarity=0.215 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
.+||||||||.|||+||..|++. |.+|+|||+.+
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~--G~~V~vlEK~~ 51 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEA--GFNTACVTKLF 51 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSC
T ss_pred cCCEEEECccHHHHHHHHHHHHC--CCcEEEEeccC
Confidence 46999999999999999999998 89999999975
No 347
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.61 E-value=0.002 Score=74.74 Aligned_cols=37 Identities=24% Similarity=0.475 Sum_probs=34.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
...++|+|||||++||+||+.|+++ |++|+|+|+++.
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~--g~~v~v~E~~~~ 312 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSF--GMDVTLLEARDR 312 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC--CCcEEEEEecCc
Confidence 4567999999999999999999998 899999999986
No 348
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=96.60 E-value=0.0013 Score=73.96 Aligned_cols=37 Identities=19% Similarity=0.430 Sum_probs=33.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHY 68 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~ 68 (706)
.+||||||||+||++||..|++. |++|+|||+.+...
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~--G~~V~liE~~~~~g 82 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGA--GYKVAMFDIGEIDS 82 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCCS
T ss_pred cCCEEEECCcHHHHHHHHHHHhC--CCcEEEEeccCCCC
Confidence 46999999999999999999998 89999999988643
No 349
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.59 E-value=0.002 Score=74.10 Aligned_cols=36 Identities=25% Similarity=0.497 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..++|+|||||++|++||..|++. |++|+|+|+++.
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~--g~~v~v~E~~~~ 370 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNF--GIKVTVLEAKDR 370 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--CCcEEEEecccc
Confidence 457999999999999999999999 899999999875
No 350
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=96.58 E-value=0.0015 Score=73.36 Aligned_cols=35 Identities=20% Similarity=0.378 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCC--CeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGK--GQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~--~~Vtlie~~~~ 66 (706)
.+||||||||+||++||..|++. | .+|+|||+.+.
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~--G~~~~V~vlEk~~~ 41 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQA--NPNAKIALISKVYP 41 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH--CTTCCEEEEESSCG
T ss_pred cCCEEEECCCHHHHHHHHHHHhc--CCCCcEEEEeCCCC
Confidence 46999999999999999999998 6 99999999753
No 351
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.58 E-value=0.0024 Score=70.57 Aligned_cols=37 Identities=30% Similarity=0.734 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..+|+||||||.||+.+|.+|++. ++++|.|+|+++.
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~-~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSED-PDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTS-TTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhC-CCCeEEEEcCCCC
Confidence 468999999999999999999984 4789999999975
No 352
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.58 E-value=0.0012 Score=74.92 Aligned_cols=35 Identities=29% Similarity=0.527 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHh-----hcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTS-----KLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~-----~~~~~~Vtlie~~~~ 66 (706)
.++|+|||||++||++|..|++ . |++|+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~--Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKP--DLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHST--TCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccC--CCCEEEEeCCCC
Confidence 4689999999999999999999 7 899999999764
No 353
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=96.51 E-value=0.0014 Score=72.45 Aligned_cols=37 Identities=27% Similarity=0.370 Sum_probs=33.2
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.++||||||||.||++||..|++. +.+|+|+|+++..
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~--G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDS--GLNVVVLEARDRV 39 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHT--TCCEEEECSSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCCCC
Confidence 357999999999999999999998 7899999997754
No 354
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.48 E-value=0.0018 Score=73.24 Aligned_cols=35 Identities=29% Similarity=0.532 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHH---h-hcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFT---S-KLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~---~-~~~~~~Vtlie~~~~ 66 (706)
.+||||||||.|||+||..|+ + . |.+|+|||+.+.
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~--G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLG--GLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTT--TCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhC--CCeEEEEeCcCC
Confidence 479999999999999999999 5 6 899999999863
No 355
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=96.47 E-value=0.0016 Score=69.79 Aligned_cols=37 Identities=22% Similarity=0.360 Sum_probs=32.8
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCC-CcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGK-GQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~-~~i~vid~~~~~ 504 (706)
+.+||+|||||.+|++||..|++. + .+|+|+|+++..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~--g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA--GFHDYTILERTDHV 42 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT--TCCCEEEECSSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC--CCCcEEEEECCCCC
Confidence 457999999999999999999998 7 899999987653
No 356
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=96.47 E-value=0.0013 Score=69.89 Aligned_cols=35 Identities=29% Similarity=0.422 Sum_probs=32.1
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
++||+|||||.+|+++|..|+++ +.+|+|||+.+.
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~--G~~V~vlE~~~~ 38 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAER--GHRVLVLERHTF 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCC
Confidence 57999999999999999999998 889999998754
No 357
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.43 E-value=0.002 Score=70.11 Aligned_cols=55 Identities=7% Similarity=0.062 Sum_probs=41.8
Q ss_pred hhHHHHHHHHHHhC--------CceEEcCCceEEEeCCCCEEEEEeCCCceEEeecEEEECCCC
Q psy8791 266 PFYAEKIHDILIGR--------GVDVHKGKALVEIDLANKEAVFKSEDKTERLPYAIMHVTPPM 321 (706)
Q Consensus 266 ~~~~~~~~~~l~~~--------gV~v~~~~~v~~i~~~~~~v~~~~~~~g~~i~~D~vI~a~G~ 321 (706)
..+.+.+.+.+.+. |++++++++|++|+.+++.+.+ .+.+|+++.+|.||+|++.
T Consensus 206 ~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v-~~~~g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 206 EAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTV-KTEDNSVYSADYVMVSASL 268 (472)
T ss_dssp THHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEE-EETTSCEEEESEEEECSCH
T ss_pred HHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEE-EECCCCEEEcCEEEEecCH
Confidence 45666666665544 7899999999999876666664 4457889999999999874
No 358
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.41 E-value=0.0022 Score=72.48 Aligned_cols=42 Identities=7% Similarity=0.102 Sum_probs=33.4
Q ss_pred CCCCCEEEccccCCCCCCchHHHHHHhHHHHHHHHHHHHcCC
Q psy8791 349 VKYSNVFAIGDCSNLPTSKTAAAVAGQCKVVYDNLSAVMKNR 390 (706)
Q Consensus 349 ~~~~~Ifa~GD~~~~~~~~~~~~a~~qg~~~a~ni~~~l~g~ 390 (706)
|+.|++||+|||+....-..+..+..+|.+++.++...+.+.
T Consensus 450 t~v~gl~a~Ge~~~~~~hg~~~~sl~~g~~ag~~a~~~~~~~ 491 (662)
T 3gyx_A 450 TTVEGLWTCADGVGASGHKFSSGSHAEGRIVGKQMVRWYLDH 491 (662)
T ss_dssp CSSBTEECCSSSBCSCCCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CccCCeEeCccccccccCccHhHHHHHHHHHHHHHHHHHhhC
Confidence 899999999999864333346677888999999998888654
No 359
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=96.39 E-value=0.0017 Score=71.56 Aligned_cols=37 Identities=19% Similarity=0.294 Sum_probs=32.9
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCC-CcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGK-GQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~-~~i~vid~~~~~ 504 (706)
..+||+|||||.|||+||..|++. + .+|+|+|+++..
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~--G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQN--GIQDCLVLEARDRV 44 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHT--TCCSEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhc--CCCCEEEEeCCCCC
Confidence 457999999999999999999997 7 899999997753
No 360
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=96.36 E-value=0.0018 Score=69.41 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=31.9
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
|||||||||.+|++||..|+++ +.+|+|+|+++..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~--G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKA--GHEVEVFERLPIT 35 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHT--TCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhC--CCceEEEeCCCCC
Confidence 4899999999999999999998 7999999997654
No 361
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=96.34 E-value=0.0019 Score=69.19 Aligned_cols=35 Identities=20% Similarity=0.254 Sum_probs=31.8
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
+||+|||||.+|+++|..|+++ +.+|+|+|+++..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~--G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARN--GHEIIVLEKSAMI 35 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCCC
Confidence 4899999999999999999998 7899999997754
No 362
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=96.34 E-value=0.002 Score=70.21 Aligned_cols=38 Identities=21% Similarity=0.308 Sum_probs=33.4
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
.++||+|||||.+|+++|..|++..++.+|+|+|+++.
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~ 40 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGER 40 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSS
T ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 46799999999999999999999844489999999764
No 363
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=96.32 E-value=0.0024 Score=70.64 Aligned_cols=34 Identities=35% Similarity=0.646 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
.+||||||||.|||+||..|++ +.+|+|||+.+.
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~---G~~V~vlEk~~~ 41 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD---QHQVIVLSKGPV 41 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT---TSCEEEECSSCT
T ss_pred CCCEEEECccHHHHHHHHHHhc---CCcEEEEECCCC
Confidence 4799999999999999999987 589999999874
No 364
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=96.31 E-value=0.0023 Score=69.22 Aligned_cols=37 Identities=16% Similarity=0.333 Sum_probs=33.5
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..+||||||||.+|+++|..|++. +.+|+|+|+++..
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~--G~~V~vlE~~~~~ 46 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVD--GKKVLHIDKQDHY 46 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCCCC
Confidence 457999999999999999999998 8899999998754
No 365
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=96.31 E-value=0.0018 Score=67.74 Aligned_cols=35 Identities=23% Similarity=0.215 Sum_probs=31.8
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
.++||+|||||.+|+++|..|+++ +.+|+|||+..
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~--G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARK--GYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC--CCEEEEEeccC
Confidence 467999999999999999999987 78999999864
No 366
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.29 E-value=0.0026 Score=70.70 Aligned_cols=38 Identities=18% Similarity=0.371 Sum_probs=33.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
...+|+||||||++|+.+|.+|++. +.+|+|+|+++..
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~--g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEA--GKKVLLLERGGPS 42 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSCCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCCCC
Confidence 3568999999999999999999998 8999999998753
No 367
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=96.28 E-value=0.002 Score=70.29 Aligned_cols=36 Identities=22% Similarity=0.353 Sum_probs=31.9
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCC--cEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKG--QVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~--~i~vid~~~~~ 504 (706)
|+||+|||||.+|+++|..|++. +. +|+|+|+++..
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~--G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRA--PCPPKVVLVESSERL 39 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTS--SSCCEEEEECSSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHhC--CCCCcEEEEeCCCCC
Confidence 46999999999999999999998 56 99999997654
No 368
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=96.28 E-value=0.0022 Score=67.68 Aligned_cols=37 Identities=27% Similarity=0.442 Sum_probs=33.2
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
+||+|||||++|+++|..|++..|+.+|+|+|+++..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 3799999999999999999998678999999997654
No 369
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=96.27 E-value=0.0019 Score=71.08 Aligned_cols=38 Identities=21% Similarity=0.414 Sum_probs=33.2
Q ss_pred CCcEE-EeceEEEEEcCCCeEEcCCCcEEeeCEEEEecC
Q psy8791 595 SGATW-VKDKIVSFDPENNRVRTQAGSEISYEYMIVASG 632 (706)
Q Consensus 595 ~gv~~-~~~~v~~id~~~~~V~~~~g~~i~yd~lViAtG 632 (706)
.|+++ ++.+|++|+.+++.|++.+|+++.||++|.++-
T Consensus 235 ~g~~i~~~~~V~~I~~~~~~v~~~~G~~~~ad~vI~t~P 273 (513)
T 4gde_A 235 EKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMA 273 (513)
T ss_dssp GGEEESGGGCEEEEETTTTEEEETTSCEEEEEEEEECSC
T ss_pred cCeeeecceEEEEEEccCCEEEEcCCCEEECCEEEECCC
Confidence 47777 677999999999999999999999999987665
No 370
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.27 E-value=0.0019 Score=72.91 Aligned_cols=36 Identities=25% Similarity=0.393 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCC--------CeEEEEcCCC-Cc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGK--------GQVSIVEPTD-DH 67 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~--------~~Vtlie~~~-~~ 67 (706)
.++|+|||||++||+||+.|++. + ++|+|+|+++ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~--g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRL--AATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH--HTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHc--CcccccCCCceEEEEeccCccc
Confidence 46899999999999999999998 5 8999999998 64
No 371
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=96.25 E-value=0.0018 Score=69.68 Aligned_cols=33 Identities=21% Similarity=0.412 Sum_probs=31.1
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
++|+|||||++|+++|..|++. +.+|+|||+.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~--G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH--DVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT--TCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHC--CCeEEEEcCCC
Confidence 6899999999999999999998 89999999876
No 372
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=96.25 E-value=0.0024 Score=66.15 Aligned_cols=35 Identities=29% Similarity=0.293 Sum_probs=32.1
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
|+||+|||||+||+.+|..+++. +.+|+|||+++.
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~--G~~V~liE~~~~ 35 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRL--GVPVRLFEMRPK 35 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCCEEEECCTTT
T ss_pred CCCEEEECchHHHHHHHHHHHHC--CCcEEEEeccCC
Confidence 57999999999999999999998 899999998763
No 373
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=96.21 E-value=0.0017 Score=70.54 Aligned_cols=38 Identities=21% Similarity=0.336 Sum_probs=33.0
Q ss_pred cccccccCcchhHHHHHHHHHhhc----CCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRL----GKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~----~~~~i~vid~~~~~ 504 (706)
++||+|||||.+|++||..|++.. |+.+|+|+|+++..
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCC
Confidence 579999999999999999999984 34899999997653
No 374
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=96.19 E-value=0.003 Score=66.08 Aligned_cols=37 Identities=24% Similarity=0.312 Sum_probs=33.0
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCC-CC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPT-DD 503 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~-~~ 503 (706)
.+.++|+|||||.+|+++|..|++. +.+|+|+|++ +.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~--G~~V~VlE~~~~~ 79 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA--GHDVTILEANANR 79 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT--SCEEEEECSCSSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC--CCcEEEEeccccc
Confidence 3467999999999999999999998 7899999997 54
No 375
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=96.15 E-value=0.0029 Score=68.46 Aligned_cols=37 Identities=22% Similarity=0.356 Sum_probs=33.1
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..+||+|||||.+|++||..|++. +.+|+|+|+++..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~--g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA--GLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC--CCcEEEEECCCCC
Confidence 457999999999999999999997 7899999997654
No 376
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=96.11 E-value=0.0034 Score=66.63 Aligned_cols=38 Identities=26% Similarity=0.358 Sum_probs=32.8
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.++||+|||||.+|+++|..|++. ++.+|+|+|+++..
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~-~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQ-LDKRVLVLERRPHI 43 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHH-SCCCEEEECSSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHh-CCCCEEEEeCCCCC
Confidence 467999999999999999999986 35799999997653
No 377
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=96.07 E-value=0.003 Score=66.61 Aligned_cols=35 Identities=23% Similarity=0.386 Sum_probs=31.8
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
++||+|||||.+|+++|..|+++ +.+|+|||+++.
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~--G~~V~vie~~~~ 37 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQ--GVKTLLVDAFDP 37 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCC
Confidence 46999999999999999999998 789999998653
No 378
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=96.06 E-value=0.0027 Score=66.10 Aligned_cols=35 Identities=20% Similarity=0.246 Sum_probs=31.1
Q ss_pred ccccccCcchhHHHHHHHHHhhc----CCCcEEEECCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRL----GKGQVSIVEPTD 502 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~----~~~~i~vid~~~ 502 (706)
+||+|||||.+|+++|..|+++. |+.+|+|+|++.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 48999999999999999999984 458999999865
No 379
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=96.03 E-value=0.004 Score=65.71 Aligned_cols=37 Identities=30% Similarity=0.422 Sum_probs=33.1
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..+||+|||||++|+++|..|++. +.+|+|+|+++..
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~--g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASS--GQRVLIVDRRPHI 64 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHC--CCceEEEeccCCC
Confidence 467999999999999999999987 7899999997653
No 380
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=96.02 E-value=0.0034 Score=66.86 Aligned_cols=36 Identities=22% Similarity=0.312 Sum_probs=32.8
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
++||+|||||.+|+++|..|+++.|+.+|+|||+..
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 579999999999999999999986778999999864
No 381
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=96.02 E-value=0.0023 Score=69.19 Aligned_cols=36 Identities=28% Similarity=0.384 Sum_probs=32.0
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCC-CcEEEECCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGK-GQVSIVEPTD 502 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~-~~i~vid~~~ 502 (706)
|.++||||||||.+|+++|..|+++ + .+|+|||++.
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~--G~~~V~vlE~~~ 57 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVW--SGGSVLVVDAGH 57 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHH--HCSCEEEEESSS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhC--CCCcEEEEccCC
Confidence 4568999999999999999999998 5 7999999833
No 382
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=95.92 E-value=0.0044 Score=64.97 Aligned_cols=35 Identities=23% Similarity=0.425 Sum_probs=31.7
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
++||+|||||.+|+++|..|.+. +.+|+|+|+++.
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~--g~~v~v~E~~~~ 35 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKL--NKKVLVIEKRNH 35 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGG--TCCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhC--CCcEEEEecCCC
Confidence 36899999999999999999987 789999999764
No 383
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=95.89 E-value=0.004 Score=65.76 Aligned_cols=36 Identities=22% Similarity=0.413 Sum_probs=32.1
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.++|+|||||.+|+++|..|.+. +.+|+|+|+++..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~--g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK--GHQVHIIDQRDHI 38 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEEESSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC--CCcEEEEEecCCc
Confidence 46899999999999999999987 7899999997653
No 384
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=95.86 E-value=0.0053 Score=68.21 Aligned_cols=38 Identities=24% Similarity=0.441 Sum_probs=33.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
...+|+||||||.||+.+|.+|++. ++.+|+|||+.++
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~-~~~~VLlLEaG~~ 54 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTEN-PNISVLVIESGSY 54 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTS-TTCCEEEECSSCC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhC-CCCcEEEEecCCC
Confidence 3468999999999999999999875 5789999999983
No 385
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=95.85 E-value=0.0048 Score=67.42 Aligned_cols=36 Identities=25% Similarity=0.369 Sum_probs=32.3
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
+.+||+|||||.||++||..|++. +.+|+|+|+++.
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~--g~~v~v~E~~~~ 45 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKA--GYKVTVLEARTR 45 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC--CCCEEEEeccCC
Confidence 356999999999999999999987 789999999765
No 386
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=95.80 E-value=0.0058 Score=66.92 Aligned_cols=35 Identities=23% Similarity=0.371 Sum_probs=32.1
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
+||+|||||.||++||..|++. +.+|+|+|+++..
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~--g~~v~v~E~~~~~ 74 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVA--GFKTLLLEARDRI 74 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT--TCCEEEECSSSBS
T ss_pred CCEEEECCcHHHHHHHHHHHHC--CCCEEEEeCCCCC
Confidence 7999999999999999999997 7899999998653
No 387
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=95.79 E-value=0.0049 Score=67.08 Aligned_cols=37 Identities=27% Similarity=0.475 Sum_probs=32.1
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..+||+|||||.+|+++|..|++. +.+|+|+|+++..
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~--g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSR--GTDAVLLESSARL 51 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTT--TCCEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCCEEEEEcCCCC
Confidence 356999999999999999999987 7899999998753
No 388
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=95.75 E-value=0.004 Score=68.83 Aligned_cols=36 Identities=33% Similarity=0.597 Sum_probs=32.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
..+|+||||||.||+.+|.+|++ +.+|+|+|+++..
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse---g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE---KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT---TSCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhc---CCcEEEEecCCCc
Confidence 45899999999999999999998 5899999999853
No 389
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=95.75 E-value=0.005 Score=67.58 Aligned_cols=37 Identities=22% Similarity=0.337 Sum_probs=32.8
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
+++||+|||||.+|+++|..|++. +.+|+|+|+++..
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~--g~~v~v~E~~~~~ 48 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIH--GLNVTVFEAEGKA 48 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTT--SCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--CCcEEEEEeCCCC
Confidence 457999999999999999999987 7899999998754
No 390
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=95.70 E-value=0.0065 Score=67.49 Aligned_cols=37 Identities=30% Similarity=0.480 Sum_probs=33.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..+|+||||||.||+.+|.+|++. +..+|+|||+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~-~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAEN-PNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTS-TTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhC-CCCcEEEEecCCC
Confidence 358999999999999999999987 3479999999986
No 391
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=95.70 E-value=0.0054 Score=67.46 Aligned_cols=37 Identities=22% Similarity=0.224 Sum_probs=33.3
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..+||||||+|.||+++|..|++. +.+|+|||+.+..
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~--G~~V~vlEk~~~~ 76 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARA--GADVLVLERTSGW 76 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCCCC
Confidence 458999999999999999999998 7899999997653
No 392
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=95.61 E-value=0.0063 Score=66.36 Aligned_cols=37 Identities=19% Similarity=0.267 Sum_probs=32.6
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCC-CcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGK-GQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~-~~i~vid~~~~~ 504 (706)
+++||+|||||.+|+++|..|.+. + .+|+|+|+++..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~--g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTEL--GYKNWHLYECNDTP 45 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHT--TCCSEEEEESSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHc--CCCCEEEEeCCCCC
Confidence 457999999999999999999987 5 699999998654
No 393
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=95.38 E-value=0.01 Score=64.98 Aligned_cols=37 Identities=30% Similarity=0.412 Sum_probs=33.0
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.++||+|||||.+|+++|..|++. +.+|+|+|+++..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~--g~~v~vlE~~~~~ 68 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGA--GHQVTVLEASERP 68 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHH--TCEEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC--CCeEEEEECCCCC
Confidence 356999999999999999999998 7899999997653
No 394
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=95.37 E-value=0.0096 Score=64.17 Aligned_cols=39 Identities=8% Similarity=0.254 Sum_probs=34.6
Q ss_pred ccccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 464 FRQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 464 ~~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
++.++||+|||+|.+|+++|..|.+. +.+|+++|++++.
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~--g~~v~~~e~~~~~ 55 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHY--GKKILVLDRNPYY 55 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSS
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHC--CCcEEEEeccCCC
Confidence 44578999999999999999999987 8899999998753
No 395
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=95.35 E-value=0.011 Score=63.52 Aligned_cols=37 Identities=14% Similarity=0.284 Sum_probs=33.0
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
...+||+|||+|.+|+++|..|.+. +.+|+++|+++.
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~--g~~v~~~e~~~~ 40 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVN--GKKVLHMDRNPY 40 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHC--CCcEEEEecCCC
Confidence 3467999999999999999999987 789999999765
No 396
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=95.34 E-value=0.013 Score=64.21 Aligned_cols=38 Identities=26% Similarity=0.318 Sum_probs=34.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
...+|++|||||.+|+.+|.+|.+. +.+|+|||+++..
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~--~~~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQA--GIPTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC--CCcEEEEECCCCC
Confidence 3458999999999999999999997 8999999998753
No 397
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=95.23 E-value=0.0093 Score=67.05 Aligned_cols=37 Identities=19% Similarity=0.418 Sum_probs=32.7
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..+||||||||+||+++|..|++. +.+|+|||+.+..
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~--G~~V~liE~~~~~ 81 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGA--GYKVAMFDIGEID 81 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCC
T ss_pred ccCCEEEECCcHHHHHHHHHHHhC--CCcEEEEeccCCC
Confidence 357999999999999999999997 8899999997654
No 398
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.20 E-value=0.01 Score=66.32 Aligned_cols=35 Identities=20% Similarity=0.306 Sum_probs=31.9
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
.+||||||||.||+++|..+++. +.+|+|+|+.+.
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~--G~~V~vlEK~~~ 41 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQS--GQTCALLSKVFP 41 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCG
T ss_pred cCCEEEECcCHHHHHHHHHHHHC--CCcEEEEecCCC
Confidence 57999999999999999999987 789999999754
No 399
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.20 E-value=0.0096 Score=66.77 Aligned_cols=36 Identities=25% Similarity=0.209 Sum_probs=32.3
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
..+||||||||.||++||..+++. +.+|+|||+.+.
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~--G~~V~vlEK~~~ 52 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEA--GFNTACVTKLFP 52 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCG
T ss_pred ccCCEEEECccHHHHHHHHHHHHC--CCcEEEEeccCC
Confidence 457999999999999999999987 789999999653
No 400
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.07 E-value=0.014 Score=63.94 Aligned_cols=38 Identities=16% Similarity=0.108 Sum_probs=33.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCcc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDHY 68 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~~ 68 (706)
..+|++|||||.+|+.+|.+|++. +.+|+|||+++...
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~--~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEA--GVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC--CCcEEEEeCCCCCC
Confidence 347999999999999999999997 89999999988543
No 401
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=95.05 E-value=0.011 Score=66.67 Aligned_cols=36 Identities=22% Similarity=0.202 Sum_probs=32.2
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
..+||||||||.||+++|..+++. +.+|+|||+.+.
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~--G~~V~vlEK~~~ 39 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQK--GLSTIVLSLIPV 39 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTT--TCCEEEECSSCG
T ss_pred ccccEEEECchHHHHHHHHHHHHC--CCcEEEEeccCC
Confidence 357999999999999999999987 789999999653
No 402
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=94.88 E-value=0.016 Score=65.41 Aligned_cols=36 Identities=25% Similarity=0.390 Sum_probs=31.4
Q ss_pred ccccccccCcchhHHHHHHHHH---h-hcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFT---S-RLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~---~-~~~~~~i~vid~~~~ 503 (706)
..+||||||||.||++||..++ + . +.+|+|||+.+.
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~--G~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLG--GLKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTT--TCCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhC--CCeEEEEeCcCC
Confidence 3479999999999999999998 4 5 789999999763
No 403
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=94.85 E-value=0.021 Score=63.74 Aligned_cols=38 Identities=29% Similarity=0.440 Sum_probs=33.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
..+|++|||||.+|+.+|.+|++. ++.+|+|||+++..
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~-~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTEN-PKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTS-TTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEecCCcc
Confidence 458999999999999999999992 38999999999754
No 404
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=94.85 E-value=0.014 Score=64.94 Aligned_cols=34 Identities=24% Similarity=0.454 Sum_probs=31.7
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
++||+|||||.+|+++|..|+++ +.+|+|||+++
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~r--G~~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAAS--GIKTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence 57999999999999999999998 89999999875
No 405
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=94.79 E-value=0.014 Score=65.42 Aligned_cols=37 Identities=19% Similarity=0.293 Sum_probs=32.0
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
.+||||||||.||+++|..|++..++.+|+|||+.+.
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~ 41 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYP 41 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCC
Confidence 4799999999999999999999833389999999653
No 406
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.75 E-value=0.032 Score=49.26 Aligned_cols=36 Identities=19% Similarity=0.317 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
.+.+|+|+|+|.-|...|..|.+. |++|+++|+++.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~--g~~v~vid~~~~ 41 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLAS--DIPLVVIETSRT 41 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCHH
Confidence 346899999999999999999998 899999999873
No 407
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=94.58 E-value=0.014 Score=64.76 Aligned_cols=37 Identities=30% Similarity=0.411 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
.+|+||||||.||+.+|.+|++. ++.+|.|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~-~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTED-PDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTS-TTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhC-cCCcEEEEecCCcc
Confidence 47999999999999999999983 48999999998754
No 408
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=94.55 E-value=0.023 Score=62.80 Aligned_cols=38 Identities=34% Similarity=0.594 Sum_probs=33.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCCc
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDDH 67 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~~ 67 (706)
..+|++|||||.+|+.+|.+|++. ++.+|+|||+.+..
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~-~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSED-PAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTS-TTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCCCEEEEecCCcC
Confidence 357999999999999999999985 57899999999753
No 409
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.54 E-value=0.038 Score=49.77 Aligned_cols=36 Identities=22% Similarity=0.305 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..++|+|+|+|..|...|..|.+. +++|+++|+++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~--g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSS--GHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHH
Confidence 346899999999999999999998 899999999863
No 410
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.51 E-value=0.03 Score=49.11 Aligned_cols=34 Identities=15% Similarity=0.401 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
.++|+|+|+|..|...|..|.+. +++|+++|+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~--g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEK--GHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCH
Confidence 46899999999999999999998 89999999875
No 411
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.47 E-value=0.031 Score=47.29 Aligned_cols=34 Identities=24% Similarity=0.334 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCC-CeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGK-GQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~-~~Vtlie~~~ 65 (706)
.++|+|+|+|..|..++..|.+. + ++|+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~--g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTS--SNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC--SSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhC--CCceEEEEeCCH
Confidence 46899999999999999999998 7 8999999975
No 412
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=94.45 E-value=0.021 Score=64.49 Aligned_cols=37 Identities=22% Similarity=0.352 Sum_probs=31.8
Q ss_pred cccccccCcchhHHHHHHHHHhh----cCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSR----LGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~----~~~~~i~vid~~~~ 503 (706)
.+||||||||.||++||..|++. .|+.+|+|||+.+.
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 47999999999999999999885 24689999998653
No 413
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=94.41 E-value=0.023 Score=61.65 Aligned_cols=36 Identities=31% Similarity=0.345 Sum_probs=31.0
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCC-cEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKG-QVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~-~i~vid~~~~ 503 (706)
+.+||+|||||.+|+++|..|.+. +. +|+|+|+++.
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~--g~~~v~~~e~~~~ 39 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEA--GITDLLILEATDH 39 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHT--TCCCEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhc--CCCceEEEeCCCC
Confidence 356899999999999999999987 66 8999999764
No 414
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.38 E-value=0.034 Score=49.08 Aligned_cols=34 Identities=24% Similarity=0.431 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
+++|+|+|+|.-|...|..|.+. |++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~--g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA--GKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECCH
Confidence 46899999999999999999998 89999999976
No 415
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=94.37 E-value=0.021 Score=63.20 Aligned_cols=36 Identities=19% Similarity=0.341 Sum_probs=32.4
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
..+|+||||+|++|+.+|.+|.+. +.+|+|+|+.+.
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~--g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEA--GKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCCC
Confidence 468999999999999999999987 789999998753
No 416
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=94.25 E-value=0.028 Score=64.60 Aligned_cols=37 Identities=22% Similarity=0.321 Sum_probs=32.8
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
..+||+|||||.+|+++|..|++. +.+|+|+|+.+..
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~--g~~v~v~E~~~~~ 371 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNF--GIKVTVLEAKDRI 371 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--CCcEEEEecccce
Confidence 357999999999999999999998 7899999986643
No 417
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=94.22 E-value=0.021 Score=63.00 Aligned_cols=34 Identities=26% Similarity=0.408 Sum_probs=30.6
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
.+||||||||.||+++|..|++ +.+|+|||+.+.
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~---G~~V~vlEk~~~ 41 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD---QHQVIVLSKGPV 41 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT---TSCEEEECSSCT
T ss_pred CCCEEEECccHHHHHHHHHHhc---CCcEEEEECCCC
Confidence 5799999999999999999987 579999999764
No 418
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=94.08 E-value=0.023 Score=62.62 Aligned_cols=35 Identities=29% Similarity=0.523 Sum_probs=31.0
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
.||+||||+|+||+.+|.+|.+ +++.+|+|+|..+
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse-~~~~~VLvLEaG~ 51 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSE-DPDSRVLLIEAGE 51 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTT-STTSCEEEECSSB
T ss_pred CeeEEEECccHHHHHHHHHHHh-CCCCeEEEEcCCC
Confidence 5899999999999999999987 3578999999864
No 419
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=94.04 E-value=0.034 Score=63.09 Aligned_cols=38 Identities=21% Similarity=0.343 Sum_probs=33.4
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
.+.++|+|||||++|+++|..|.+. +.+|+|+|+.+..
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~--g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSF--GMDVTLLEARDRV 142 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHT--TCEEEEECSSSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHC--CCeEEEEecCCCC
Confidence 3467999999999999999999987 8899999987653
No 420
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.98 E-value=0.062 Score=48.16 Aligned_cols=34 Identities=9% Similarity=0.207 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
+.+|+|+|+|..|...|..|.+. +++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~--g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR--GQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT--TCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCCEEEEECCC
Confidence 46899999999999999999998 89999999974
No 421
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=93.84 E-value=0.03 Score=62.17 Aligned_cols=37 Identities=32% Similarity=0.493 Sum_probs=32.6
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
+.||+||||||.||+.+|.+|.+. ++.+|+|||+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~-~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAEN-PNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTS-TTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhC-CCCcEEEEecCCC
Confidence 358999999999999999999875 5579999998765
No 422
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=93.81 E-value=0.029 Score=62.21 Aligned_cols=36 Identities=25% Similarity=0.405 Sum_probs=32.1
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
..||+||||||.||+.+|.+|.+. ++.+|+|||+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~-~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTEN-PNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTS-TTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhC-CCCcEEEEecCC
Confidence 468999999999999999999763 578999999876
No 423
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=93.68 E-value=0.043 Score=63.62 Aligned_cols=38 Identities=21% Similarity=0.343 Sum_probs=33.5
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDDH 504 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~~ 504 (706)
...++|+|||||++|+++|..|.+. +.+|+|+|+.+..
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~--g~~v~v~E~~~~~ 313 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSF--GMDVTLLEARDRV 313 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC--CCcEEEEEecCcC
Confidence 3467999999999999999999988 8899999987653
No 424
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=93.56 E-value=0.035 Score=61.43 Aligned_cols=36 Identities=33% Similarity=0.369 Sum_probs=31.7
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
.||+||||||.||+.+|.+|.+ +++.+|+|||+.+.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse-~~~~~VlllEaG~~ 37 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTE-DPDVSVLVLEAGVS 37 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTT-STTCCEEEECSSBC
T ss_pred CcCEEEECCcHHHHHHHHHHHh-CcCCcEEEEecCCc
Confidence 4799999999999999999987 35899999998654
No 425
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.51 E-value=0.075 Score=53.76 Aligned_cols=36 Identities=28% Similarity=0.446 Sum_probs=32.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..++|.|||+|.-|.+.|..|++. |++|+++|+++.
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~--G~~V~~~d~~~~ 49 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAAT--GHTVVLVDQTED 49 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHH
Confidence 346899999999999999999998 899999999863
No 426
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=93.51 E-value=0.032 Score=61.51 Aligned_cols=35 Identities=31% Similarity=0.598 Sum_probs=31.4
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
..+|+||||+|+||+.+|.+|.+ +.+|+|+|+.+.
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse---g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE---KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT---TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc---CCcEEEEecCCC
Confidence 46899999999999999999988 579999998754
No 427
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.36 E-value=0.085 Score=50.42 Aligned_cols=35 Identities=29% Similarity=0.491 Sum_probs=32.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
..++|+|||||-.|...|..|.+. |.+|+||+++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~--GA~VtVvap~~ 64 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE--GAAITVVAPTV 64 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG--CCCEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCC
Confidence 457899999999999999999999 89999999864
No 428
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=93.09 E-value=0.035 Score=62.66 Aligned_cols=38 Identities=24% Similarity=0.388 Sum_probs=32.2
Q ss_pred cccccccCcchhHHHHHHHHHhhcCC------CcEEEECCCC-CC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGK------GQVSIVEPTD-DH 504 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~------~~i~vid~~~-~~ 504 (706)
+++|+|||||.||+++|..|.+..+. .+|+|+|+++ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 56899999999999999999987311 7899999987 54
No 429
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=92.79 E-value=0.073 Score=58.23 Aligned_cols=37 Identities=24% Similarity=0.232 Sum_probs=32.7
Q ss_pred cccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 465 RQMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 465 ~~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
...+|++|||+|.+|+.+|.+|.+. +.+|+|||+...
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~--~~~v~~~e~~~~ 45 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQA--GIPTQIVEMGRS 45 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC--CCcEEEEECCCC
Confidence 3568999999999999999999985 889999998753
No 430
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.73 E-value=0.055 Score=47.67 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=30.7
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
.|++|+|+|+|.-|...|..|.+. +.+|+++|.++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~--g~~V~~id~~~ 39 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAA--GKKVLAVDKSK 39 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECCH
Confidence 456899999999999999999987 78999999754
No 431
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=92.60 E-value=0.1 Score=45.81 Aligned_cols=34 Identities=21% Similarity=0.291 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
+++|+|+|+|..|...|..|.+. +++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~--g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRM--GHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCH
Confidence 35799999999999999999998 89999999875
No 432
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.32 E-value=0.081 Score=50.61 Aligned_cols=34 Identities=24% Similarity=0.443 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
++|+|+|+|.-|...|..|.+. +++|+++|+++.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~--g~~v~vid~~~~ 34 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR--KYGVVIINKDRE 34 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT--TCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHH
Confidence 4799999999999999999998 899999998863
No 433
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.16 E-value=0.087 Score=52.05 Aligned_cols=35 Identities=23% Similarity=0.486 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
..++|+|||||-.|...|..|.+. |++|+||+++.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~--Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPT--GCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGG--TCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhC--CCEEEEEcCCC
Confidence 357899999999999999999999 99999999865
No 434
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=92.16 E-value=0.078 Score=57.96 Aligned_cols=36 Identities=17% Similarity=0.101 Sum_probs=31.9
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
..+|++|||+|++|+.+|.+|.+. +.+|+|||+.+.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~--~~~v~~~e~~~~ 39 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEA--GVQTLMLEMGQL 39 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC--CCcEEEEeCCCC
Confidence 357999999999999999999986 789999998763
No 435
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=91.61 E-value=0.092 Score=58.52 Aligned_cols=37 Identities=30% Similarity=0.417 Sum_probs=32.1
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
..+|+||||+|.+|+.+|.+|.+. ++.+|+|||+...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~-~~~~v~~~e~g~~ 59 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTEN-PKIKVLVIEKGFY 59 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTS-TTCCEEEEESSCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEecCCc
Confidence 458999999999999999999882 3789999998754
No 436
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=91.37 E-value=0.19 Score=51.87 Aligned_cols=35 Identities=29% Similarity=0.539 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCC-eEEEEcCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKG-QVSIVEPTD 65 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~-~Vtlie~~~ 65 (706)
...+|||+|||.||+++|..|... |. +|+++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~--Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAA--GATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH--TCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHc--CCCeEEEEECCC
Confidence 457999999999999999999998 77 999999974
No 437
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.35 E-value=0.19 Score=52.38 Aligned_cols=36 Identities=25% Similarity=0.313 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
...+|+|||+|.+|+.+|..|+.. |.+|+++|+++.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~ 224 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL--GAVVSATDVRPA 224 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--CCEEEEEcCCHH
Confidence 346899999999999999999988 899999999974
No 438
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=91.03 E-value=0.13 Score=55.04 Aligned_cols=35 Identities=14% Similarity=0.256 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
.++|+|||.|.+|+++|..|.++ |++|+++|.++.
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~--G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLAR--GVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTT--TCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhC--CCEEEEEECCCC
Confidence 46899999999999999999998 999999999874
No 439
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.02 E-value=0.21 Score=51.71 Aligned_cols=36 Identities=19% Similarity=0.214 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
...+|+|||+|..|+.+|..|+.. |.+|+++|+++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~ 218 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL--GAKTTGYDVRPE 218 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSGG
T ss_pred CCCEEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHH
Confidence 346899999999999999999998 899999999873
No 440
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=90.96 E-value=0.091 Score=56.51 Aligned_cols=36 Identities=22% Similarity=0.606 Sum_probs=32.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
+.|+|+|+|+|-.|.+.|..|.+. +++|++||+++.
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~--~~~v~vId~d~~ 37 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGE--NNDITIVDKDGD 37 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCST--TEEEEEEESCHH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHC--CCCEEEEECCHH
Confidence 457899999999999999999988 899999999873
No 441
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=90.68 E-value=0.23 Score=50.76 Aligned_cols=37 Identities=16% Similarity=0.044 Sum_probs=31.6
Q ss_pred CCCCcEEEECCCHHHHH-HHHHHHhhcCCCeEEEEcCCCC
Q psy8791 28 SHSCKLLVVGGGAAGCS-MAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~-aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
+..++|.|||.|-+|++ +|..|.++ |++|++.|.++.
T Consensus 2 ~~~~~i~~iGiGg~Gms~~A~~L~~~--G~~V~~~D~~~~ 39 (326)
T 3eag_A 2 NAMKHIHIIGIGGTFMGGLAAIAKEA--GFEVSGCDAKMY 39 (326)
T ss_dssp -CCCEEEEESCCSHHHHHHHHHHHHT--TCEEEEEESSCC
T ss_pred CCCcEEEEEEECHHHHHHHHHHHHhC--CCEEEEEcCCCC
Confidence 34678999999999997 77788888 999999999873
No 442
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=90.65 E-value=0.24 Score=55.08 Aligned_cols=62 Identities=3% Similarity=-0.129 Sum_probs=49.6
Q ss_pred chhHHHHHHHHHHhCCceEEcCCceEEEeCCC--CEEEEEeCCCceEEeecEEEECCCCCchhh
Q psy8791 265 SPFYAEKIHDILIGRGVDVHKGKALVEIDLAN--KEAVFKSEDKTERLPYAIMHVTPPMGPVPE 326 (706)
Q Consensus 265 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~--~~v~~~~~~~g~~i~~D~vI~a~G~~~~~~ 326 (706)
...+.+.+.+.+++.|.+++++++|.+|..++ ++++.+.+.+|+++.||.||..+...|...
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~~~ 440 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSENT 440 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBCTTT
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcCHhH
Confidence 46788899999999999999999999987554 556665555799999999998766655433
No 443
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=90.61 E-value=0.32 Score=51.52 Aligned_cols=39 Identities=26% Similarity=0.237 Sum_probs=34.5
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 26 SSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 26 ~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
+.+.+.+|.|||.|+.||..|..|++. |++|+.+|-++.
T Consensus 17 ~~~~m~~IaViGlGYVGLp~A~~~A~~--G~~V~g~Did~~ 55 (444)
T 3vtf_A 17 RGSHMASLSVLGLGYVGVVHAVGFALL--GHRVVGYDVNPS 55 (444)
T ss_dssp TTCCCCEEEEECCSHHHHHHHHHHHHH--TCEEEEECSCHH
T ss_pred CCCCCCEEEEEccCHHHHHHHHHHHhC--CCcEEEEECCHH
Confidence 444667999999999999999999999 999999998763
No 444
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=90.58 E-value=0.25 Score=50.95 Aligned_cols=34 Identities=26% Similarity=0.299 Sum_probs=31.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCC-eEEEEcCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKG-QVSIVEPT 64 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~-~Vtlie~~ 64 (706)
...+|||+|||-+|+.+|..|... |. +|+++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~--G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDL--GVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH--TCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECC
Confidence 467999999999999999999998 76 89999998
No 445
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=90.34 E-value=0.2 Score=53.76 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
.++|.|||.|.+|+++|..|+++ |++|++.|.++
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~--G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKL--GAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHT--TCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC--CCEEEEEeCCc
Confidence 57899999999999999999999 99999999986
No 446
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.19 E-value=0.2 Score=44.78 Aligned_cols=34 Identities=15% Similarity=0.180 Sum_probs=30.0
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
..+++|+|+|.-|...+..|.+. +.+|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~--g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR--GQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT--TCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCCEEEEECCC
Confidence 45799999999999999999887 78999999853
No 447
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.14 E-value=0.27 Score=50.06 Aligned_cols=34 Identities=24% Similarity=0.401 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCC--eEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKG--QVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~--~Vtlie~~~ 65 (706)
.++|+|||+|..|...|..|.+. ++ +|+++|+++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~--g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR--GIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCCh
Confidence 46899999999999999999988 77 999999975
No 448
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=90.12 E-value=0.15 Score=56.22 Aligned_cols=36 Identities=39% Similarity=0.594 Sum_probs=31.7
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
.+|++|||+|.+|+.+|.+|.+. ++.+|+|+|+.+.
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~-~~~~v~~~e~g~~ 48 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSED-PAVSVALVEAGPD 48 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTS-TTSCEEEECSSCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-CCCCEEEEecCCc
Confidence 58999999999999999999875 5689999998754
No 449
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.80 E-value=0.34 Score=44.68 Aligned_cols=35 Identities=14% Similarity=0.247 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
..+|+|+|+|..|..+|..|.+.. +++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~-g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARY-GKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHH-CSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhcc-CCeEEEEECCH
Confidence 468999999999999999998751 57999999986
No 450
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=89.76 E-value=0.31 Score=50.61 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
+++|+|||||.-|..+|+.+++. |++|+++|+++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~--G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKA--GMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCCC
Confidence 47899999999999999999998 999999998874
No 451
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.53 E-value=0.2 Score=43.55 Aligned_cols=33 Identities=12% Similarity=0.355 Sum_probs=29.2
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
++|+|+|+|.-|...+..|.+. +.+|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~--g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK--GHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCH
Confidence 4799999999999999999887 78999998744
No 452
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.53 E-value=0.33 Score=49.42 Aligned_cols=33 Identities=33% Similarity=0.469 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
++|.|||+|.-|.+.|..|++. |++|+++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT--GHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT--TCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCh
Confidence 6899999999999999999998 89999999976
No 453
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=89.46 E-value=0.43 Score=48.75 Aligned_cols=35 Identities=17% Similarity=0.267 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCC-eEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKG-QVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~-~Vtlie~~~~ 66 (706)
+++|.|||+|..|.+.|..|+.. ++ +|+|+|.++.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~--g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALR--ELADVVLYDVVKG 44 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECChh
Confidence 46899999999999999999998 76 8999999864
No 454
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=89.45 E-value=0.19 Score=43.95 Aligned_cols=35 Identities=20% Similarity=0.273 Sum_probs=29.7
Q ss_pred ccccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 466 QMFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 466 ~~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
+|.+|+|+|+|.-|..++..|.+. +.+|+++|+++
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~--g~~v~~~d~~~ 39 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRM--GHEVLAVDINE 39 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHT--TCCCEEEESCH
T ss_pred cCCcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCH
Confidence 356799999999999999999987 68899998743
No 455
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=89.43 E-value=0.18 Score=42.35 Aligned_cols=34 Identities=24% Similarity=0.360 Sum_probs=29.4
Q ss_pred cccccccCcchhHHHHHHHHHhhcCC-CcEEEECCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGK-GQVSIVEPTD 502 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~-~~i~vid~~~ 502 (706)
|++|+|+|+|..|..++..|.+. + .+|+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~--g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTS--SNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC--SSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhC--CCceEEEEeCCH
Confidence 45899999999999999999987 5 7899998743
No 456
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=89.37 E-value=0.32 Score=52.51 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
.++|.|||+|+.|+..|..|++. |++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~--G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI--GHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhC--CCEEEEEECCH
Confidence 57999999999999999999998 89999999876
No 457
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=89.29 E-value=0.33 Score=48.43 Aligned_cols=35 Identities=20% Similarity=0.232 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
.++|.|||+|.-|...|..|++. |++|+++|+++.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~--G~~V~l~d~~~~ 38 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH--GFAVTAYDINTD 38 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCHH
Confidence 46899999999999999999998 899999999863
No 458
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=89.19 E-value=0.41 Score=45.27 Aligned_cols=36 Identities=17% Similarity=0.356 Sum_probs=31.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..++|.|||+|..|.+.|..|.+. +++|+++++++.
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~--g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIA--GHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT--TCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHH
Confidence 356899999999999999999998 899999998864
No 459
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=89.09 E-value=0.39 Score=48.58 Aligned_cols=37 Identities=22% Similarity=0.229 Sum_probs=33.4
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 27 SSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 27 ~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
...+++|.|||.|.-|...|..|.+. |++|+++|+++
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~--G~~V~~~dr~~ 54 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKN--GFKVTVWNRTL 54 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSG
T ss_pred cccCCEEEEECccHHHHHHHHHHHHC--CCeEEEEeCCH
Confidence 34467999999999999999999998 89999999986
No 460
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=88.84 E-value=0.39 Score=47.87 Aligned_cols=34 Identities=21% Similarity=0.167 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
++|.|||+|..|...|..|.+. |++|+++++++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~ 34 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ--GHEVQGWLRVPQ 34 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCC
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCCEEEEEcCcc
Confidence 4799999999999999999998 899999999874
No 461
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=88.80 E-value=0.31 Score=49.46 Aligned_cols=35 Identities=29% Similarity=0.360 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
.++|.|||+|.-|.+.|..|++. |++|+++|+++.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~--G~~V~l~d~~~~ 40 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCCHH
Confidence 46899999999999999999998 899999999874
No 462
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=88.61 E-value=0.33 Score=49.07 Aligned_cols=35 Identities=29% Similarity=0.360 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..+|.|||+|.-|..-|..++.. |++|+|+|.++.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~--G~~V~l~D~~~~ 40 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhC--CCeEEEEECCHH
Confidence 45899999999999999999998 999999999863
No 463
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=88.59 E-value=0.4 Score=50.45 Aligned_cols=35 Identities=23% Similarity=0.374 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..+|+|||+|.+|+.+|..++.. |.+|+++|+++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~--Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSL--GAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHH
Confidence 56899999999999999999988 889999999863
No 464
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=88.57 E-value=0.4 Score=48.45 Aligned_cols=34 Identities=18% Similarity=0.406 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
+++|.|||+|..|...|..|.+. |++|+++++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~ 36 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQG--GNDVTLIDQWP 36 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCH
T ss_pred CCeEEEECcCHHHHHHHHHHHhC--CCcEEEEECCH
Confidence 46899999999999999999998 89999999875
No 465
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=88.48 E-value=0.39 Score=51.38 Aligned_cols=34 Identities=24% Similarity=0.321 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
++|.|||+|+.|+..|..|++. |++|+++|+++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~--G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL--GANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhc--CCEEEEEECCHH
Confidence 6899999999999999999998 899999999863
No 466
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=88.48 E-value=0.51 Score=47.93 Aligned_cols=35 Identities=20% Similarity=0.319 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCC-eEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKG-QVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~-~Vtlie~~~~ 66 (706)
+++|.|||+|..|.+.|..|++. ++ +|+++|+++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~--g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKD--NLADVVLFDIAEG 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCceEEEEeCCch
Confidence 46899999999999999999998 77 9999999863
No 467
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=88.39 E-value=0.43 Score=47.41 Aligned_cols=35 Identities=11% Similarity=0.122 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
.+++|+|.|+|+-|-..+..|.++ |++|+++++++
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~--g~~V~~~~r~~ 38 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQ--GWRIIGTSRNP 38 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGG--TCEEEEEESCG
T ss_pred CcCcEEEECCcHHHHHHHHHHHHC--CCEEEEEEcCh
Confidence 357899999999999999999998 89999999876
No 468
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=88.39 E-value=0.61 Score=49.66 Aligned_cols=37 Identities=22% Similarity=0.312 Sum_probs=33.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 28 SHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 28 ~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
...++|.|||+|.-|...|..|++. |++|+++|+++.
T Consensus 52 ~~i~kVaVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e 88 (460)
T 3k6j_A 52 YDVNSVAIIGGGTMGKAMAICFGLA--GIETFLVVRNEQ 88 (460)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECcHH
Confidence 3457899999999999999999998 999999999874
No 469
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=88.35 E-value=0.27 Score=44.01 Aligned_cols=34 Identities=21% Similarity=0.251 Sum_probs=29.8
Q ss_pred cccccccCcchhHHHHHHHHHhhcCCCcEEEECCCC
Q psy8791 467 MFHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTD 502 (706)
Q Consensus 467 ~~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~ 502 (706)
..+|+|+|+|.-|..++..|++. +.+|+++|+++
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~--g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSS--GHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCeEEEEECCH
Confidence 34799999999999999999887 78999998754
No 470
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=88.17 E-value=0.3 Score=42.79 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=30.4
Q ss_pred ccccccCcchhHHHHHHHHHhhcCCCcEEEECCCCC
Q psy8791 468 FHLGVVGGGAAGCSMAAKFTSRLGKGQVSIVEPTDD 503 (706)
Q Consensus 468 ~~ivIIGaG~aG~~~a~~l~~~~~~~~i~vid~~~~ 503 (706)
.+|+|+|+|.-|...|..|++. +.+|+++|.++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~--g~~v~vid~~~~ 41 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS--DIPLVVIETSRT 41 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHH
T ss_pred CCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCHH
Confidence 4799999999999999999987 789999998653
No 471
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=88.02 E-value=0.49 Score=46.01 Aligned_cols=40 Identities=23% Similarity=0.292 Sum_probs=32.5
Q ss_pred CCCCCCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 25 SSSSHSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 25 ~~~~~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
......++|.|||+|.-|.+.|..|.+. |++|+++++++.
T Consensus 14 ~~~~~~~kIgiIG~G~mG~alA~~L~~~--G~~V~~~~r~~~ 53 (245)
T 3dtt_A 14 NLYFQGMKIAVLGTGTVGRTMAGALADL--GHEVTIGTRDPK 53 (245)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHH
T ss_pred ccccCCCeEEEECCCHHHHHHHHHHHHC--CCEEEEEeCChh
Confidence 3444568999999999999999999998 899999998863
No 472
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=87.95 E-value=0.5 Score=49.43 Aligned_cols=36 Identities=22% Similarity=0.235 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
...+|+|+|+|.+|+.+|..++.. |.+|+++|+++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~--Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL--GAVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHH
Confidence 456899999999999999999988 889999999864
No 473
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=87.81 E-value=0.37 Score=48.86 Aligned_cols=33 Identities=24% Similarity=0.362 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
++|.|||+|.-|.+.|..|++. |++|+++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS--GEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT--SCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCeEEEEEcCc
Confidence 6899999999999999999998 89999999975
No 474
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=87.73 E-value=0.53 Score=47.59 Aligned_cols=36 Identities=19% Similarity=0.409 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
++|.|||+|..|.+.|..|++...+++|+++|+++.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 479999999999999999998522689999999864
No 475
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=87.68 E-value=0.26 Score=43.43 Aligned_cols=34 Identities=24% Similarity=0.369 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
.++|+|||+|..|...|..|.+. +++|+++++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~--g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYP--QYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTT--TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEcCCH
Confidence 56899999999999999999886 78899999876
No 476
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=87.51 E-value=0.51 Score=47.57 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCC--eEEEEcCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKG--QVSIVEPTD 65 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~--~Vtlie~~~ 65 (706)
++|.|||+|..|.+.|..|+.. ++ +|+++|.++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~--g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLR--GSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCCH
Confidence 4799999999999999999988 77 999999975
No 477
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=87.50 E-value=0.54 Score=47.72 Aligned_cols=34 Identities=18% Similarity=0.403 Sum_probs=29.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCC--eEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKG--QVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~--~Vtlie~~~ 65 (706)
+++|+|||+|..|.+.|..|... +. +|+++|.++
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~--~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALR--QTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCCh
Confidence 46899999999999999999987 55 899999875
No 478
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=87.35 E-value=0.57 Score=47.10 Aligned_cols=35 Identities=23% Similarity=0.424 Sum_probs=30.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCC--eEEEEcCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKG--QVSIVEPTD 65 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~--~Vtlie~~~ 65 (706)
..++|.|||+|..|.+.|..|... ++ +|+|+|.++
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~--g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAK--GIADRLVLLDLSE 49 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhc--CCCCEEEEEcCCc
Confidence 457899999999999999999888 66 999999986
No 479
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=87.18 E-value=0.64 Score=47.25 Aligned_cols=35 Identities=26% Similarity=0.423 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCC-eEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKG-QVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~-~Vtlie~~~~ 66 (706)
.++|.|||+|..|...|..|+.. ++ +|+|+|.++.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~--g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQK--NLGDVVLFDIVKN 39 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeCCHH
Confidence 46899999999999999999988 66 8999998763
No 480
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=87.13 E-value=0.53 Score=50.70 Aligned_cols=36 Identities=17% Similarity=0.275 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
.++|.|||.|+.|+..|..|++..++++|+++|+++
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 468999999999999999999885568999999876
No 481
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=87.09 E-value=0.57 Score=49.88 Aligned_cols=35 Identities=23% Similarity=0.336 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..+|.|||.|+-|+..|..|++. |++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~--G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF--GHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC--CCEEEEEeCCHH
Confidence 35899999999999999999999 999999999874
No 482
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=87.01 E-value=0.45 Score=50.22 Aligned_cols=35 Identities=14% Similarity=0.248 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
..+|+|||.|.-|...|..|.+. +++|++||+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~--g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSS--GVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCCEEEEECCHH
Confidence 46899999999999999999998 899999999974
No 483
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=86.99 E-value=0.47 Score=47.61 Aligned_cols=34 Identities=18% Similarity=0.375 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
+++|.|||+|.-|.+.|..|.+. +++|+++++++
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~--g~~V~~~~r~~ 35 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQS--LPHTTLIGRHA 35 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHH--CTTCEEEESSC
T ss_pred CcEEEEECCCHHHHHHHHHHHHC--CCeEEEEEecc
Confidence 36899999999999999999998 78999999985
No 484
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=86.92 E-value=0.65 Score=47.36 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCC-eEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKG-QVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~-~Vtlie~~~~ 66 (706)
+++|.|||+|..|.+.|..|+.. ++ +|+|+|.++.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~--g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQK--DLGDVYMFDIIEG 49 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECCHH
Confidence 36899999999999999999988 77 8999999864
No 485
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=86.81 E-value=0.49 Score=50.70 Aligned_cols=34 Identities=21% Similarity=0.240 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
.++|+|||||-.|...|..|.+. |.+|+|++++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~--ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEA--GARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT--TBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--cCEEEEEcCCC
Confidence 47899999999999999999998 89999999864
No 486
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=86.74 E-value=0.65 Score=45.26 Aligned_cols=34 Identities=21% Similarity=0.476 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCC-eEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKG-QVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~-~Vtlie~~~ 65 (706)
..+|+|||+|-.|..+|..|++. |. +|+|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~--Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA--GVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH--TCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc--CCCeEEEEcCCC
Confidence 46899999999999999999999 75 899999986
No 487
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=86.71 E-value=0.7 Score=45.45 Aligned_cols=35 Identities=20% Similarity=0.366 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
.++++|||+|-+|-++|..|.+. |.+|+|++|+..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~--G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQ--GLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHH
Confidence 67999999999999999999998 689999999863
No 488
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=86.68 E-value=0.55 Score=48.51 Aligned_cols=35 Identities=20% Similarity=0.344 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
.++|.|||+|.-|.+.|..|++. |++|+++++++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~--G~~V~l~~r~~~ 63 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK--GQKVRLWSYESD 63 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT--TCCEEEECSCHH
T ss_pred CCeEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHH
Confidence 46899999999999999999998 899999999753
No 489
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=86.65 E-value=0.57 Score=50.60 Aligned_cols=37 Identities=24% Similarity=0.328 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
.++|.|||.|+.|+..|..|++..++++|+++|+++.
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~ 45 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTA 45 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 4689999999999999999999855689999998763
No 490
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=86.41 E-value=0.58 Score=47.58 Aligned_cols=35 Identities=20% Similarity=0.291 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
..++|.|||.|..|...|..|.+. |++|+++|+++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA--GYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT--TCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhC--CCeEEEEcCCH
Confidence 457999999999999999999998 89999999886
No 491
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=86.41 E-value=0.61 Score=48.30 Aligned_cols=34 Identities=26% Similarity=0.391 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
..+|+|+|+|.+|+.++..|+.. |.+|+++|+++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~--Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGL--GAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCH
Confidence 36899999999999999999988 88999999986
No 492
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=86.31 E-value=0.63 Score=47.61 Aligned_cols=34 Identities=18% Similarity=0.391 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
.++|.|||+|.-|.+.|..|++. +++|+++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~--g~~V~~~~r~~ 36 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA--GEAINVLARGA 36 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT--TCCEEEECCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCEEEEEEChH
Confidence 36899999999999999999998 89999999853
No 493
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=86.28 E-value=0.8 Score=46.50 Aligned_cols=35 Identities=20% Similarity=0.388 Sum_probs=30.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCC--eEEEEcCCC
Q psy8791 29 HSCKLLVVGGGAAGCSMAAKFTSKLGKG--QVSIVEPTD 65 (706)
Q Consensus 29 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~--~Vtlie~~~ 65 (706)
..++|.|||+|..|.+.|..|+.. +. +|+++|.++
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~--~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQ--GITDELVVIDVNK 40 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCCceEEEEecch
Confidence 356899999999999999999988 55 899999865
No 494
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=86.26 E-value=0.68 Score=43.98 Aligned_cols=34 Identities=18% Similarity=0.222 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
.++|.|||+|..|.+.|..|.+. +++|+++++++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~--g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGS--GFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT--TCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCH
Confidence 46899999999999999999988 88999999875
No 495
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=86.20 E-value=0.5 Score=50.36 Aligned_cols=34 Identities=18% Similarity=0.272 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
++|.|||+|+.|+..|..|++. |++|+++|+++.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~--G~~V~~~d~~~~ 34 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR--GHEVIGVDVSST 34 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEECCHH
Confidence 4799999999999999999998 899999998763
No 496
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=86.13 E-value=0.66 Score=46.25 Aligned_cols=34 Identities=24% Similarity=0.319 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 31 CKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 31 ~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
++|.|||.|..|...|..|.+. |++|+++|+++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA--GCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHC--CCeEEEEcCCHH
Confidence 5899999999999999999998 899999999863
No 497
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=86.13 E-value=0.5 Score=47.42 Aligned_cols=35 Identities=29% Similarity=0.385 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTDD 66 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~~ 66 (706)
+++|.|||.|.-|...|..|.+. |++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW--PGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS--TTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCHH
Confidence 46899999999999999999998 899999999874
No 498
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=85.97 E-value=0.69 Score=47.68 Aligned_cols=34 Identities=26% Similarity=0.224 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 30 SCKLLVVGGGAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 30 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
+++|.|||+|..|...|..|.+. +++|+++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~--g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALK--GQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCH
Confidence 36899999999999999999998 89999999875
No 499
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=85.84 E-value=0.71 Score=44.33 Aligned_cols=35 Identities=17% Similarity=0.320 Sum_probs=31.7
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 29 HSCKLLVVGG-GAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 29 ~~~~VvIIGg-G~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
..++|+|.|| |.-|...+.+|.++ |++|+++++++
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNK--GHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhC--CCeEEEEECCh
Confidence 4578999999 99999999999998 89999999976
No 500
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=85.81 E-value=0.77 Score=43.32 Aligned_cols=33 Identities=18% Similarity=0.371 Sum_probs=30.4
Q ss_pred CcEEEECC-CHHHHHHHHHHHhhcCCCeEEEEcCCC
Q psy8791 31 CKLLVVGG-GAAGCSMAAKFTSKLGKGQVSIVEPTD 65 (706)
Q Consensus 31 ~~VvIIGg-G~aGl~aA~~L~~~~~~~~Vtlie~~~ 65 (706)
++|+|.|| |+-|...+..|.++ |++|++++|++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR--GHEVTAIVRNA 34 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhC--CCEEEEEEcCc
Confidence 47999997 99999999999998 89999999986
Done!