BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8797
(122 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O00716|E2F3_HUMAN Transcription factor E2F3 OS=Homo sapiens GN=E2F3 PE=1 SV=1
Length = 465
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 74/109 (67%), Gaps = 7/109 (6%)
Query: 18 VKRRLNLDQDDEE---SPFKTPKSVKKMRVNPPTTPAKEKG----TRYDTSLGLLTKKFV 70
KRRL L + + KTPK + + P +P K TRYDTSLGLLTKKF+
Sbjct: 132 AKRRLELGESGHQYLSDGLKTPKGKGRAALRSPDSPKTPKSPSEKTRYDTSLGLLTKKFI 191
Query: 71 KLLQSSPQGVVDLNVASESLDVQKRRIYDITNVLEGIGILEKKSKNNIQ 119
+LL SP GV+DLN A+E L VQKRRIYDITNVLEGI +++KKSKNN+Q
Sbjct: 192 QLLSQSPDGVLDLNKAAEVLKVQKRRIYDITNVLEGIHLIKKKSKNNVQ 240
>sp|O35261|E2F3_MOUSE Transcription factor E2F3 OS=Mus musculus GN=E2f3 PE=1 SV=2
Length = 457
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 74/108 (68%), Gaps = 7/108 (6%)
Query: 19 KRRLNLDQDDEE---SPFKTPKSVKKMRVNPPTTPAKEKG----TRYDTSLGLLTKKFVK 71
KRRL L + + KTPK + + P +P K TRYDTSLGLLTKKF++
Sbjct: 125 KRRLELGESGHQYLSDGLKTPKGKGRAALRSPDSPKTPKSPSEKTRYDTSLGLLTKKFIQ 184
Query: 72 LLQSSPQGVVDLNVASESLDVQKRRIYDITNVLEGIGILEKKSKNNIQ 119
LL SP GV+DLN A+E L VQKRRIYDITNVLEGI +++KKSKNN+Q
Sbjct: 185 LLSQSPDGVLDLNKAAEVLKVQKRRIYDITNVLEGIHLIKKKSKNNVQ 232
>sp|P56931|E2F2_MOUSE Transcription factor E2F2 OS=Mus musculus GN=E2f2 PE=1 SV=2
Length = 443
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 70/92 (76%), Gaps = 7/92 (7%)
Query: 33 FKTPKSVKKMRVN---PPTTPAKEKG--TRYDTSLGLLTKKFVKLLQSSPQGVVDLNVAS 87
F+TPK K +RV+ P TP K G TRYDTSLGLLTKKF+ LL S GV+DLN A+
Sbjct: 104 FRTPKG-KCIRVDGLPSPKTP-KSPGEKTRYDTSLGLLTKKFIYLLSESEDGVLDLNWAA 161
Query: 88 ESLDVQKRRIYDITNVLEGIGILEKKSKNNIQ 119
E LDVQKRRIYDITNVLEGI ++ KKSKNNIQ
Sbjct: 162 EVLDVQKRRIYDITNVLEGIQLIRKKSKNNIQ 193
>sp|Q14209|E2F2_HUMAN Transcription factor E2F2 OS=Homo sapiens GN=E2F2 PE=1 SV=1
Length = 437
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 69/92 (75%), Gaps = 7/92 (7%)
Query: 33 FKTPKSVKKMRVN---PPTTPAKEKG--TRYDTSLGLLTKKFVKLLQSSPQGVVDLNVAS 87
F TPK K +RV+ P TP K G TRYDTSLGLLTKKF+ LL S GV+DLN A+
Sbjct: 102 FPTPKG-KCIRVDGLPSPKTP-KSPGEKTRYDTSLGLLTKKFIYLLSESEDGVLDLNWAA 159
Query: 88 ESLDVQKRRIYDITNVLEGIGILEKKSKNNIQ 119
E LDVQKRRIYDITNVLEGI ++ KK+KNNIQ
Sbjct: 160 EVLDVQKRRIYDITNVLEGIQLIRKKAKNNIQ 191
>sp|Q90977|E2F1_CHICK Transcription factor E2F1 OS=Gallus gallus GN=E2F1 PE=2 SV=1
Length = 403
Score = 103 bits (256), Expect = 4e-22, Method: Composition-based stats.
Identities = 59/104 (56%), Positives = 73/104 (70%), Gaps = 4/104 (3%)
Query: 18 VKRRLNLDQDDEESPFKTPKSVKKMRVNPPTTPAKEKG--TRYDTSLGLLTKKFVKLLQS 75
VKR+LNL+ D + P + + R+ P AK G +RY+TSL L TK+F++LL
Sbjct: 65 VKRKLNLETDHQYIAESLPAARGRARI--PGRGAKSPGEKSRYETSLNLTTKRFLELLSQ 122
Query: 76 SPQGVVDLNVASESLDVQKRRIYDITNVLEGIGILEKKSKNNIQ 119
SP GVVDLN A+E L VQKRRIYDITNVLEGI ++ KKSKNNIQ
Sbjct: 123 SPDGVVDLNWAAEVLKVQKRRIYDITNVLEGIQLITKKSKNNIQ 166
>sp|Q27368|E2F_DROME Transcription factor E2f OS=Drosophila melanogaster GN=E2f PE=1
SV=2
Length = 805
Score = 99.8 bits (247), Expect = 4e-21, Method: Composition-based stats.
Identities = 53/63 (84%), Positives = 54/63 (85%)
Query: 57 RYDTSLGLLTKKFVKLLQSSPQGVVDLNVASESLDVQKRRIYDITNVLEGIGILEKKSKN 116
R DTSLG+LTKKFV LLQ SP GVVDLN AS L VQKRRIYDITNVLEGI ILEKKSKN
Sbjct: 254 RADTSLGILTKKFVDLLQESPDGVVDLNEASNRLHVQKRRIYDITNVLEGINILEKKSKN 313
Query: 117 NIQ 119
NIQ
Sbjct: 314 NIQ 316
>sp|Q9FV71|E2FB_ARATH Transcription factor E2FB OS=Arabidopsis thaliana GN=E2FB PE=1 SV=1
Length = 469
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 58/71 (81%)
Query: 51 AKEKGTRYDTSLGLLTKKFVKLLQSSPQGVVDLNVASESLDVQKRRIYDITNVLEGIGIL 110
A+ RYD+SLGLLTKKF+ L++ + G++DLN A+++L+VQKRRIYDITNVLEGIG++
Sbjct: 123 AQAGTCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLI 182
Query: 111 EKKSKNNIQCK 121
EK KN IQ K
Sbjct: 183 EKTLKNRIQWK 193
>sp|Q9FV70|E2FC_ARATH Transcription factor E2FC OS=Arabidopsis thaliana GN=E2FC PE=1 SV=1
Length = 396
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 55/65 (84%)
Query: 57 RYDTSLGLLTKKFVKLLQSSPQGVVDLNVASESLDVQKRRIYDITNVLEGIGILEKKSKN 116
RYD+SLGLLTKKFVKL+Q + G +DLN + L+VQKRRIYDITNVLEGIG++EK +KN
Sbjct: 155 RYDSSLGLLTKKFVKLIQEAEDGTLDLNYCAVVLEVQKRRIYDITNVLEGIGLIEKTTKN 214
Query: 117 NIQCK 121
+I+ K
Sbjct: 215 HIRWK 219
>sp|Q61501|E2F1_MOUSE Transcription factor E2F1 OS=Mus musculus GN=E2f1 PE=1 SV=1
Length = 430
Score = 93.6 bits (231), Expect = 3e-19, Method: Composition-based stats.
Identities = 57/109 (52%), Positives = 70/109 (64%), Gaps = 14/109 (12%)
Query: 18 VKRRLNLDQDDE-----ESPFKTPKSVKKMRVNPPTTPAKEKG--TRYDTSLGLLTKKFV 70
VKRRL+L+ D + PF+ R P K G +RY+TSL L TK+F+
Sbjct: 83 VKRRLDLETDHQYLAGSSGPFRG-------RGRHPGKGVKSPGEKSRYETSLNLTTKRFL 135
Query: 71 KLLQSSPQGVVDLNVASESLDVQKRRIYDITNVLEGIGILEKKSKNNIQ 119
+LL S GVVDLN A+E L VQKRRIYDITNVLEGI ++ KKSKN+IQ
Sbjct: 136 ELLSRSADGVVDLNWAAEVLKVQKRRIYDITNVLEGIQLIAKKSKNHIQ 184
>sp|Q01094|E2F1_HUMAN Transcription factor E2F1 OS=Homo sapiens GN=E2F1 PE=1 SV=1
Length = 437
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/104 (52%), Positives = 68/104 (65%), Gaps = 4/104 (3%)
Query: 18 VKRRLNLDQDDEESPFKTPKSVKKMRVNPPTTPAKEKG--TRYDTSLGLLTKKFVKLLQS 75
VKRRL+L+ D + + R P K G +RY+TSL L TK+F++LL
Sbjct: 88 VKRRLDLETDHQY--LAESSGPARGRGRHPGKGVKSPGEKSRYETSLNLTTKRFLELLSH 145
Query: 76 SPQGVVDLNVASESLDVQKRRIYDITNVLEGIGILEKKSKNNIQ 119
S GVVDLN A+E L VQKRRIYDITNVLEGI ++ KKSKN+IQ
Sbjct: 146 SADGVVDLNWAAEVLKVQKRRIYDITNVLEGIQLIAKKSKNHIQ 189
>sp|Q9FNY0|E2FA_ARATH Transcription factor E2FA OS=Arabidopsis thaliana GN=E2FA PE=1 SV=1
Length = 485
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 60/87 (68%)
Query: 35 TPKSVKKMRVNPPTTPAKEKGTRYDTSLGLLTKKFVKLLQSSPQGVVDLNVASESLDVQK 94
TP++ P T RYD+SLGLLTKKFV L++ + G++DLN A+E+L+VQK
Sbjct: 145 TPQTPISTNAGSPITLTPSGSCRYDSSLGLLTKKFVNLIKQAKDGMLDLNKAAETLEVQK 204
Query: 95 RRIYDITNVLEGIGILEKKSKNNIQCK 121
RRIYDITNVLEGI ++EK KN I K
Sbjct: 205 RRIYDITNVLEGIDLIEKPFKNRILWK 231
>sp|Q16254|E2F4_HUMAN Transcription factor E2F4 OS=Homo sapiens GN=E2F4 PE=1 SV=2
Length = 413
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Query: 56 TRYDTSLGLLTKKFVKLLQSSPQGVVDLNVASESLDV-QKRRIYDITNVLEGIGILEKKS 114
+R++ SLGLLT KFV LLQ + GV+DL +A+++L V QKRRIYDITNVLEGIG++EKKS
Sbjct: 16 SRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKS 75
Query: 115 KNNIQCK 121
KN+IQ K
Sbjct: 76 KNSIQWK 82
>sp|Q8R0K9|E2F4_MOUSE Transcription factor E2F4 OS=Mus musculus GN=E2f4 PE=2 SV=1
Length = 410
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Query: 56 TRYDTSLGLLTKKFVKLLQSSPQGVVDLNVASESLDV-QKRRIYDITNVLEGIGILEKKS 114
+R++ SLGLLT KFV LLQ + GV+DL +A+++L V QKRRIYDITNVLEGIG++EKKS
Sbjct: 16 SRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKS 75
Query: 115 KNNIQCK 121
KN+IQ K
Sbjct: 76 KNSIQWK 82
>sp|Q61502|E2F5_MOUSE Transcription factor E2F5 OS=Mus musculus GN=E2f5 PE=2 SV=2
Length = 335
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Query: 47 PTTPAKEKGTRYDTSLGLLTKKFVKLLQSSPQGVVDLNVASESLDV-QKRRIYDITNVLE 105
P+ +R++ SLGLLT KFV LLQ + GV+DL A+++L V QKRRIYDITNVLE
Sbjct: 30 PSAALAGGSSRHEKSLGLLTTKFVSLLQEAQDGVLDLKAAADTLAVRQKRRIYDITNVLE 89
Query: 106 GIGILEKKSKNNIQCK 121
GI ++EKKSKN+IQ K
Sbjct: 90 GIDLIEKKSKNSIQWK 105
>sp|Q15329|E2F5_HUMAN Transcription factor E2F5 OS=Homo sapiens GN=E2F5 PE=1 SV=1
Length = 346
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 56 TRYDTSLGLLTKKFVKLLQSSPQGVVDLNVASESLDV-QKRRIYDITNVLEGIGILEKKS 114
+R++ SLGLLT KFV LLQ + GV+DL A+++L V QKRRIYDITNVLEGI ++EKKS
Sbjct: 49 SRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKS 108
Query: 115 KNNIQCK 121
KN+IQ K
Sbjct: 109 KNSIQWK 115
>sp|Q62814|E2F5_RAT Transcription factor E2F5 (Fragment) OS=Rattus norvegicus GN=E2f5
PE=2 SV=1
Length = 300
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 56 TRYDTSLGLLTKKFVKLLQSSPQGVVDLNVASESLDV-QKRRIYDITNVLEGIGILEKKS 114
+R++ SLGLLT KFV LLQ + GV+DL A+++L V QKRRIYDITNVLEGI ++EKKS
Sbjct: 4 SRHEKSLGLLTTKFVSLLQEAQDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKS 63
Query: 115 KNNIQCK 121
KN+IQ K
Sbjct: 64 KNSIQWK 70
>sp|Q08DY6|E2F6_BOVIN Transcription factor E2F6 OS=Bos taurus GN=E2F6 PE=2 SV=1
Length = 285
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 54/68 (79%)
Query: 52 KEKGTRYDTSLGLLTKKFVKLLQSSPQGVVDLNVASESLDVQKRRIYDITNVLEGIGILE 111
K K R+D SL LT+KF+ L++S+P G++DLN + L V+KRR+YDITNVL+GI ++E
Sbjct: 58 KVKRPRFDVSLVYLTRKFMDLVRSAPGGILDLNKVATKLGVRKRRVYDITNVLDGIDLVE 117
Query: 112 KKSKNNIQ 119
KKSKN+I+
Sbjct: 118 KKSKNHIR 125
>sp|O75461|E2F6_HUMAN Transcription factor E2F6 OS=Homo sapiens GN=E2F6 PE=1 SV=1
Length = 281
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 54/68 (79%)
Query: 52 KEKGTRYDTSLGLLTKKFVKLLQSSPQGVVDLNVASESLDVQKRRIYDITNVLEGIGILE 111
K K R+D SL LT+KF+ L++S+P G++DLN + L V+KRR+YDITNVL+GI ++E
Sbjct: 58 KVKRPRFDVSLVYLTRKFMDLVRSAPGGILDLNKVATKLGVRKRRVYDITNVLDGIDLVE 117
Query: 112 KKSKNNIQ 119
KKSKN+I+
Sbjct: 118 KKSKNHIR 125
>sp|O54917|E2F6_MOUSE Transcription factor E2F6 OS=Mus musculus GN=E2f6 PE=1 SV=2
Length = 272
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 54/68 (79%)
Query: 52 KEKGTRYDTSLGLLTKKFVKLLQSSPQGVVDLNVASESLDVQKRRIYDITNVLEGIGILE 111
K K R+D SL LT+KF+ L++S+P G++DLN + L V+KRR+YDITNVL+GI ++E
Sbjct: 58 KVKRPRFDVSLVYLTRKFMDLVRSAPGGILDLNKVATKLGVRKRRVYDITNVLDGIELVE 117
Query: 112 KKSKNNIQ 119
KKSKN+I+
Sbjct: 118 KKSKNHIR 125
>sp|O77051|E2F2_DROME Transcription factor E2F2 OS=Drosophila melanogaster GN=E2f2 PE=1
SV=1
Length = 370
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 45/52 (86%), Gaps = 1/52 (1%)
Query: 61 SLGLLTKKFVKLLQSSPQGVVDLNVASESLDVQKRRIYDITNVLEGIGILEK 112
SL LLT+KFV L++++ +G +DL A++ LDVQKRRIYDITNVLEGIG+++K
Sbjct: 77 SLVLLTQKFVDLVKAN-EGSIDLKAATKILDVQKRRIYDITNVLEGIGLIDK 127
>sp|O09139|E2F1_RAT Transcription factor E2F1 (Fragment) OS=Rattus norvegicus GN=E2f1
PE=1 SV=1
Length = 38
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/38 (73%), Positives = 31/38 (81%)
Query: 69 FVKLLQSSPQGVVDLNVASESLDVQKRRIYDITNVLEG 106
F++LL S GVVDLN A+E L VQKRRIYDITNVLEG
Sbjct: 1 FLELLSHSADGVVDLNWAAEVLKVQKRRIYDITNVLEG 38
>sp|Q8LSZ4|E2FE_ARATH E2F transcription factor-like E2FE OS=Arabidopsis thaliana GN=E2FE
PE=2 SV=1
Length = 403
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 56 TRYDTSLGLLTKKFVKLLQSSPQGVVDLNVASESLDVQKRRIYDITNVLEGIGILEKKSK 115
+R SLGLL F+ L +V L+ A+ L V++RRIYDI NVLE +G+L +++K
Sbjct: 33 SRKQKSLGLLCTNFLALYNREGIEMVGLDDAASKLGVERRRIYDIVNVLESVGVLTRRAK 92
Query: 116 NNIQCK 121
N K
Sbjct: 93 NQYTWK 98
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 21/98 (21%)
Query: 26 QDDEESPFKTPKSVKKMRVNPPTTPAKEKGTRYDTSLGLLTKKFVKLLQSSPQ-GVVDLN 84
Q D P P+S +++ R + SLGLLT+ F+KL S ++ L+
Sbjct: 148 QTDSSKPGSLPQSSDPSKID----------NRREKSLGLLTQNFIKLFICSEAIRIISLD 197
Query: 85 VASESL--DVQK--------RRIYDITNVLEGIGILEK 112
A++ L D RR+YDI NVL + ++EK
Sbjct: 198 DAAKLLLGDAHNTSIMRTKVRRLYDIANVLSSMNLIEK 235
>sp|Q8RWL0|E2FF_ARATH E2F transcription factor-like E2FF OS=Arabidopsis thaliana GN=E2FF
PE=2 SV=1
Length = 354
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%)
Query: 56 TRYDTSLGLLTKKFVKLLQSSPQGVVDLNVASESLDVQKRRIYDITNVLEGIGILEKKSK 115
+R + SLG+L F++L ++ L+ A+ L V++RRIYD+ N+LE IGI+ ++ K
Sbjct: 20 SRKEKSLGVLVSNFLRLYNRDDVDLIGLDDAAGQLGVERRRIYDVVNILESIGIVARRGK 79
Query: 116 NNIQCK 121
N K
Sbjct: 80 NQYSWK 85
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 10/62 (16%)
Query: 61 SLGLLTKKFVKLLQSSPQGVVDLNVASESL----------DVQKRRIYDITNVLEGIGIL 110
SL LL + FVK+ S ++ L+ A+++L + RR+YDI NV + ++
Sbjct: 149 SLWLLAQNFVKMFLCSDDDLITLDSAAKALLSDSPDSVHMRTKVRRLYDIANVFASMNLI 208
Query: 111 EK 112
EK
Sbjct: 209 EK 210
>sp|Q9LFQ9|E2FD_ARATH E2F transcription factor-like E2FD OS=Arabidopsis thaliana GN=E2FD
PE=1 SV=1
Length = 359
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 56 TRYDTSLGLLTKKFVKLLQSSPQGVVDLNVASESLDVQKRRIYDITNVLEGIGILEKKSK 115
+R D SLG+L F+ L + L+ A+ L V++RRIYD+ N+LE IG++ + K
Sbjct: 12 SRKDKSLGVLVANFLTLYNRPDVDLFGLDDAAAKLGVERRRIYDVVNILESIGLVARSGK 71
Query: 116 NNIQCK 121
N K
Sbjct: 72 NQYSWK 77
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 49 TPAKEKGTRYDTSLGLLTKKFVKLLQSSPQGVVDLNVA-------SESLDVQK--RRIYD 99
+P+ R + +L LL + FVKL S +V + A S+ ++++K RR+YD
Sbjct: 130 SPSPRPDNRKERTLWLLAQNFVKLFLCSDDDLVTFDSATKALLNESQDMNMRKKVRRLYD 189
Query: 100 ITNVLEGIGILEK 112
I NV + ++EK
Sbjct: 190 IANVFSSMKLIEK 202
>sp|F1LMN3|E2F8_RAT Transcription factor E2F8 OS=Rattus norvegicus GN=E2f8 PE=2 SV=2
Length = 860
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 52 KEKGTRYDTSLGLLTKKFVKLLQSSPQGVVD----LNVASESLDVQKRRIYDITNVLEGI 107
K + +R + SLGLL KF+ P V+ L+ +E LDV++RRIYDI NVLE +
Sbjct: 107 KSQPSRKEKSLGLLCHKFLARYPKYPNPAVNNDICLDEVAEELDVERRRIYDIVNVLESL 166
Query: 108 GILEKKSKN 116
++ + +KN
Sbjct: 167 HMVSRLAKN 175
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 16/77 (20%)
Query: 51 AKEKGTRYDTSLGLLTKKFVKL-LQSSPQGVVDLNVAS---------ESLDVQK-----R 95
A +R D SL ++++KFV L L S+PQ +V L +A+ E LD K R
Sbjct: 255 AASANSRKDKSLRVMSQKFVMLFLVSTPQ-IVSLEIAAKILIGEDHVEDLDKSKFKTKIR 313
Query: 96 RIYDITNVLEGIGILEK 112
R+YDI NVL + +++K
Sbjct: 314 RLYDIANVLSSLDLIKK 330
>sp|Q5RIX9|E2F7_DANRE Transcription factor E2F7 OS=Danio rerio GN=e2f7 PE=3 SV=2
Length = 723
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 56 TRYDTSLGLLTKKFVKLLQSSPQGVVDLNVA----SESLDVQKRRIYDITNVLEGIGILE 111
+R SLGLL +KF+ L P+ +N++ + L V++RRIYDI NVLE + ++
Sbjct: 146 SRKQKSLGLLCQKFLALYPDYPESSESINISLDEVATCLGVERRRIYDIVNVLESLMLVS 205
Query: 112 KKSKN 116
+K+KN
Sbjct: 206 RKAKN 210
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 13/69 (18%)
Query: 57 RYDTSLGLLTKKFVKLLQSSPQGVVDLNVAS---------ESLD----VQKRRIYDITNV 103
R D SL ++++KFV L S V L++A+ ES D + RR+YDI NV
Sbjct: 264 RKDKSLRIMSQKFVMLFLVSKTQTVTLDMAAKILIEEGQEESYDSKYKTKVRRLYDIANV 323
Query: 104 LEGIGILEK 112
L + +++K
Sbjct: 324 LTSLNLIKK 332
>sp|F6YVB9|E2F7_XENTR Transcription factor E2F7 OS=Xenopus tropicalis GN=e2f7 PE=3 SV=1
Length = 862
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 52 KEKGTRYDTSLGLLTKKFVKLLQSSP----QGVVDLNVASESLDVQKRRIYDITNVLEGI 107
+++ +R SLGLL +KF+ S P + + L+ A+ SL V++RRIYDI NVLE +
Sbjct: 135 EKRPSRKQKSLGLLCQKFLARYPSYPISTEKMTISLDEAASSLGVERRRIYDIVNVLESL 194
Query: 108 GILEKKSKN 116
++ + +KN
Sbjct: 195 HLVSRVAKN 203
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 50 PAKEKGTRYDTSLGLLTKKFVKLLQSSPQGVVDLNVAS-----ESLDVQK--------RR 96
P+ +R D SL ++++KFV L S ++ L +A+ ES D RR
Sbjct: 272 PSVSSSSRKDKSLRIMSQKFVMLFLVSTTKIITLEIAAKILIEESQDAADHSKFKTKVRR 331
Query: 97 IYDITNVLEGIGILEK 112
+YDI NVL +G+++K
Sbjct: 332 LYDIANVLTSLGLIKK 347
>sp|E1BKK0|E2F8_BOVIN Transcription factor E2F8 OS=Bos taurus GN=E2F8 PE=3 SV=2
Length = 866
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 52 KEKGTRYDTSLGLLTKKFVKLLQSSPQGVVD----LNVASESLDVQKRRIYDITNVLEGI 107
K + +R + SLGLL KF+ + P V+ L+ +E L+V++RRIYDI NVLE +
Sbjct: 108 KSQPSRKEKSLGLLCHKFLARYPNYPNPAVNNDICLDEVAEELNVERRRIYDIVNVLESL 167
Query: 108 GILEKKSKN 116
++ + +KN
Sbjct: 168 HMVSRLAKN 176
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 16/77 (20%)
Query: 51 AKEKGTRYDTSLGLLTKKFVKL-LQSSPQGVVDLNVAS---------ESLDVQK-----R 95
A +R D SL ++++KFV L L S+PQ +V L +A+ E LD K R
Sbjct: 255 AASVNSRKDKSLKVMSQKFVTLFLVSTPQ-IVSLEIAAKILTWEDHVEDLDRSKFKTKIR 313
Query: 96 RIYDITNVLEGIGILEK 112
R+YDI NVL + +++K
Sbjct: 314 RLYDIANVLSSLDLIKK 330
>sp|A0AVK6|E2F8_HUMAN Transcription factor E2F8 OS=Homo sapiens GN=E2F8 PE=1 SV=1
Length = 867
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 52 KEKGTRYDTSLGLLTKKFVKLLQSSPQGVVD----LNVASESLDVQKRRIYDITNVLEGI 107
K + +R + SLGLL KF+ + P V+ L+ +E L+V++RRIYDI NVLE +
Sbjct: 108 KSQPSRKEKSLGLLCHKFLARYPNYPNPAVNNDICLDEVAEELNVERRRIYDIVNVLESL 167
Query: 108 GILEKKSKN 116
++ + +KN
Sbjct: 168 HMVSRLAKN 176
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 16/77 (20%)
Query: 51 AKEKGTRYDTSLGLLTKKFVKL-LQSSPQGVVDLNVAS---------ESLDVQK-----R 95
A +R D SL ++++KFV L L S+PQ +V L VA+ E LD K R
Sbjct: 255 AASVNSRKDKSLRVMSQKFVMLFLVSTPQ-IVSLEVAAKILIGEDHVEDLDKSKFKTKIR 313
Query: 96 RIYDITNVLEGIGILEK 112
R+YDI NVL + +++K
Sbjct: 314 RLYDIANVLSSLDLIKK 330
>sp|Q58FA4|E2F8_MOUSE Transcription factor E2F8 OS=Mus musculus GN=E2f8 PE=1 SV=1
Length = 860
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 52 KEKGTRYDTSLGLLTKKFVKLLQSSPQGVVD----LNVASESLDVQKRRIYDITNVLEGI 107
K + +R + SLGLL KF+ P V+ L+ +E L+V++RRIYDI NVLE +
Sbjct: 108 KSQPSRKEKSLGLLCHKFLARYPKYPNPAVNNDICLDEVAEELNVERRRIYDIVNVLESL 167
Query: 108 GILEKKSKN 116
++ + +KN
Sbjct: 168 HMVSRLAKN 176
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 16/77 (20%)
Query: 51 AKEKGTRYDTSLGLLTKKFVKL-LQSSPQGVVDLNVAS---------ESLDVQK-----R 95
A +R D SL ++++KFV L L S+PQ +V L +A+ E LD K R
Sbjct: 255 AASVNSRKDKSLRVMSQKFVMLFLVSTPQ-IVSLEIAAKILIGEDHVEDLDKSKYKTKIR 313
Query: 96 RIYDITNVLEGIGILEK 112
R+YDI NVL + +++K
Sbjct: 314 RLYDIANVLSSLDLIKK 330
>sp|Q6S7F2|E2F7_MOUSE Transcription factor E2F7 OS=Mus musculus GN=E2f7 PE=1 SV=1
Length = 904
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 52 KEKGTRYDTSLGLLTKKFVKLLQSSP----QGVVDLNVASESLDVQKRRIYDITNVLEGI 107
K++ +R SLGLL +KF+ S P + + L+ + SL V++RRIYDI NVLE +
Sbjct: 138 KQRPSRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVSLGVERRRIYDIVNVLESL 197
Query: 108 GILEKKSKN 116
++ + +KN
Sbjct: 198 HLVSRVAKN 206
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 50 PAKEKGTRYDTSLGLLTKKFVKLLQSSPQGVVDLNVAS-----ESLDVQK--------RR 96
P+ +R D SL ++++KFV L S +V L+VA+ ES D RR
Sbjct: 276 PSSSANSRKDKSLRIMSQKFVMLFLVSKTKIVTLDVAAKILIEESQDTPDHSKFKTKVRR 335
Query: 97 IYDITNVLEGIGILEK 112
+YDI NVL + +++K
Sbjct: 336 LYDIANVLTSLALIKK 351
>sp|E1BE02|E2F7_BOVIN Transcription factor E2F7 OS=Bos taurus GN=E2F7 PE=3 SV=1
Length = 911
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 52 KEKGTRYDTSLGLLTKKFVKLLQSSP----QGVVDLNVASESLDVQKRRIYDITNVLEGI 107
K++ +R SLGLL +KF+ S P + + L+ + SL V++RRIYDI NVLE +
Sbjct: 136 KQRPSRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVSLGVERRRIYDIVNVLESL 195
Query: 108 GILEKKSKN 116
++ + +KN
Sbjct: 196 HLVSRVAKN 204
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 47 PTTPAKEKGTRYDTSLGLLTKKFVKLLQSSPQGVVDLNVAS-----ESLDVQK------- 94
P P+ +R D SL ++++KFV L S +V L+VA+ ES D+
Sbjct: 271 PDCPSSSANSRKDKSLKIMSQKFVMLFLVSKTKIVTLDVAAKILIEESQDIPDHSKFKTK 330
Query: 95 -RRIYDITNVLEGIGILEK 112
RR+YDI NVL + +++K
Sbjct: 331 VRRLYDIANVLTSLMLIKK 349
>sp|Q96AV8|E2F7_HUMAN Transcription factor E2F7 OS=Homo sapiens GN=E2F7 PE=1 SV=3
Length = 911
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 52 KEKGTRYDTSLGLLTKKFVKLLQSSP----QGVVDLNVASESLDVQKRRIYDITNVLEGI 107
K++ +R SLGLL +KF+ S P + + L+ + SL V++RRIYDI NVLE +
Sbjct: 137 KQRPSRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVSLGVERRRIYDIVNVLESL 196
Query: 108 GILEKKSKN 116
++ + +KN
Sbjct: 197 HLVSRVAKN 205
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 47 PTTPAKEKGTRYDTSLGLLTKKFVKLLQSSPQGVVDLNVAS-----ESLDVQK------- 94
P P+ +R D SL ++++KFV L S +V L+VA+ ES D
Sbjct: 272 PDCPSSSANSRKDKSLRIMSQKFVMLFLVSKTKIVTLDVAAKILIEESQDAPDHSKFKTK 331
Query: 95 -RRIYDITNVLEGIGILEK 112
RR+YDI NVL + +++K
Sbjct: 332 VRRLYDIANVLTSLALIKK 350
>sp|D4A4D7|E2F7_RAT Transcription factor E2F7 OS=Rattus norvegicus GN=E2f7 PE=3 SV=1
Length = 902
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 52 KEKGTRYDTSLGLLTKKFVKLLQSSP----QGVVDLNVASESLDVQKRRIYDITNVLEGI 107
K + +R SLGLL +KF+ S P + + L+ + SL V++RRIYDI NVLE +
Sbjct: 138 KRRPSRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVSLGVERRRIYDIVNVLESL 197
Query: 108 GILEKKSKN 116
++ + +KN
Sbjct: 198 HLVSRVAKN 206
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 50 PAKEKGTRYDTSLGLLTKKFVKLLQSSPQGVVDLNVAS-----ESLDVQK--------RR 96
P+ +R D SL ++++KFV L S +V L+VA+ ES D RR
Sbjct: 276 PSSSANSRKDKSLRIMSQKFVMLFLVSKTKIVTLDVAAKILIEESQDTPDHSKFKTKVRR 335
Query: 97 IYDITNVLEGIGILEK 112
+YDI NVL + +++K
Sbjct: 336 LYDIANVLTSLALIKK 351
>sp|F7EA39|E2F8_XENTR Transcription factor E2F8 OS=Xenopus tropicalis GN=e2f8 PE=3 SV=1
Length = 736
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 56 TRYDTSLGLLTKKFVKLLQSSPQGVVD----LNVASESLDVQKRRIYDITNVLEGIGILE 111
+R + SLGLL KF+ S P V+ L+ + L V++RRIYDI NVLE + ++
Sbjct: 97 SRKEKSLGLLCHKFLARYPSYPNPAVNNSICLDEVAGELSVERRRIYDIVNVLESLHMVS 156
Query: 112 KKSKN 116
+ +KN
Sbjct: 157 RLAKN 161
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 16/77 (20%)
Query: 51 AKEKGTRYDTSLGLLTKKFVKL-LQSSPQGVVDLNVAS---------ESLDVQK-----R 95
A +R + SL +++++FV L L S PQ +V L VA+ E LD K R
Sbjct: 234 AASVNSRKEKSLRVMSQRFVMLFLVSDPQ-IVSLEVAAKILIGEDQLEDLDKSKFKTKIR 292
Query: 96 RIYDITNVLEGIGILEK 112
R+YDI NVL + +++K
Sbjct: 293 RLYDIANVLTSLNLIKK 309
>sp|F1QZ88|E2F8_DANRE Transcription factor E2F8 OS=Danio rerio GN=e2f8 PE=2 SV=1
Length = 917
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 6/66 (9%)
Query: 56 TRYDTSLGLLTKKFVKLLQSSPQ-----GVVDLNVASESLDVQKRRIYDITNVLEGIGIL 110
+R D SLGLL KF+ + P G+ +VA+E L V++RRIYDI NVLE + ++
Sbjct: 125 SRKDKSLGLLCYKFLARYPNYPNPALNNGISLDDVAAE-LHVERRRIYDIMNVLESLNMV 183
Query: 111 EKKSKN 116
+ +KN
Sbjct: 184 SRLAKN 189
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 14/76 (18%)
Query: 51 AKEKGTRYDTSLGLLTKKFVKLLQSSPQGVVDLNVASESL-------DVQK-------RR 96
A +R D SL ++++KFV L S VV L+VA++ L D K RR
Sbjct: 267 AASANSRKDKSLRVMSQKFVMLFLVSSPPVVSLDVAAKILIGEDHVVDQDKNKFKTKIRR 326
Query: 97 IYDITNVLEGIGILEK 112
+YDI NVL + +++K
Sbjct: 327 LYDIANVLSSLELIKK 342
>sp|P98161|PKD1_HUMAN Polycystin-1 OS=Homo sapiens GN=PKD1 PE=1 SV=3
Length = 4303
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 16 NMVKRRLNLDQDDE--ESPFKTPKSVKKMRVNPPTT----PAKEKGTRYDTSLGLLTKKF 69
++V +RL+ D+DD ESP TP S + RV PP AKE+ + G+L
Sbjct: 3616 SLVAKRLHPDEDDTLVESPAVTPVSARVPRVRPPHGFALFLAKEEARKVKRLHGMLRSLL 3675
Query: 70 VKLL 73
V +L
Sbjct: 3676 VYML 3679
>sp|O08852|PKD1_MOUSE Polycystin-1 OS=Mus musculus GN=Pkd1 PE=1 SV=2
Length = 4293
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 16 NMVKRRLNLDQDDE--ESPFKTPKSVKKMRVNPP 47
++V +RL+ D+DD ESP TP S + RV PP
Sbjct: 3606 SLVAKRLHPDEDDTLVESPAVTPVSERVPRVRPP 3639
>sp|Q98QW4|PGK_MYCPU Phosphoglycerate kinase OS=Mycoplasma pulmonis (strain UAB CTIP)
GN=pgk PE=3 SV=1
Length = 771
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 30 ESPFKTPKSVKKMRVNPPTTPAKEKGTRYDTSLGLLTKKFVKLLQSSPQGVVDL-NVASE 88
E+P + P++ M V P T K + DT LG+ K + + P GV + S
Sbjct: 284 ENPLEIPQTFIGMDVGPKTIELIHKYIKGDTKLGISPAK--TIFWNGPMGVTEFEEFQSG 341
Query: 89 SLDV-----QKRRIYDITNVLEGIGILEK 112
SL V Q Y + + I I+EK
Sbjct: 342 SLAVVEAISQLVGAYSVVGGGDSIAIIEK 370
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,394,285
Number of Sequences: 539616
Number of extensions: 1675435
Number of successful extensions: 3723
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3646
Number of HSP's gapped (non-prelim): 67
length of query: 122
length of database: 191,569,459
effective HSP length: 89
effective length of query: 33
effective length of database: 143,543,635
effective search space: 4736939955
effective search space used: 4736939955
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)