Your job contains 1 sequence.
>psy8798
MAETEDDQWLYGDQAGQNTGDPNTTEPPQPDPKEQSSFSELPAFSDIAQNPDPQGKFTVE
EFEQIGTINSTAPHEFNLDQLEDKPWRKPGADITDYFNYGFTEETWRAHHMSSI
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8798
(114 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0037255 - symbol:Fip1 species:7227 "Drosophila mel... 248 2.1e-22 2
UNIPROTKB|Q6UN15 - symbol:FIP1L1 "Pre-mRNA 3'-end-process... 170 2.7e-14 2
ZFIN|ZDB-GENE-041010-138 - symbol:fip1l1b "FIP1 like 1b (... 163 8.4e-14 2
UNIPROTKB|E1BKM0 - symbol:E1BKM0 "Uncharacterized protein... 170 9.2e-14 2
RGD|1309336 - symbol:Fip1l1 "FIP1 like 1 (S. cerevisiae)"... 170 1.0e-13 2
UNIPROTKB|Q5U317 - symbol:Fip1l1 "Pre-mRNA 3'-end-process... 170 1.0e-13 2
MGI|MGI:1914149 - symbol:Fip1l1 "FIP1 like 1 (S. cerevisi... 170 1.4e-13 2
UNIPROTKB|E1BWP4 - symbol:Gga.5511 "Uncharacterized prote... 169 1.4e-13 2
WB|WBGene00017988 - symbol:fipp-1 species:6239 "Caenorhab... 178 8.2e-13 1
DICTYBASE|DDB_G0288797 - symbol:fip1l1 "cleavage and poly... 155 2.6e-11 2
POMBASE|SPAC22G7.10 - symbol:SPAC22G7.10 "mRNA cleavage a... 157 6.7e-11 1
CGD|CAL0000262 - symbol:orf19.4258 species:5476 "Candida ... 132 5.5e-10 2
UNIPROTKB|Q5AGC1 - symbol:FIP1 "Pre-mRNA polyadenylation ... 132 5.5e-10 2
SGD|S000003853 - symbol:FIP1 "Subunit of cleavage polyade... 123 1.1e-09 2
TAIR|locus:2155806 - symbol:FIP1[V] "homolog of yeast FIP... 125 3.9e-08 2
ASPGD|ASPL0000044774 - symbol:AN2433 species:162425 "Emer... 127 1.2e-07 1
UNIPROTKB|G4NIC0 - symbol:MGG_14293 "Uncharacterized prot... 118 1.2e-06 1
>FB|FBgn0037255 [details] [associations]
symbol:Fip1 species:7227 "Drosophila melanogaster"
[GO:0005515 "protein binding" evidence=IPI] [GO:0006398 "histone
mRNA 3'-end processing" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] EMBL:AE014297 GO:GO:0005634 GO:GO:0006398
Gene3D:1.10.10.440 InterPro:IPR002713 Pfam:PF01846 SUPFAM:SSF81698
eggNOG:COG5213 KO:K14405 InterPro:IPR007854 Pfam:PF05182
GeneTree:ENSGT00530000062987 RefSeq:NP_649476.1 UniGene:Dm.1059
ProteinModelPortal:Q9VN31 IntAct:Q9VN31 MINT:MINT-1547159
STRING:Q9VN31 PaxDb:Q9VN31 PRIDE:Q9VN31 EnsemblMetazoa:FBtr0078928
GeneID:40569 KEGG:dme:Dmel_CG1078 UCSC:CG1078-RA CTD:40569
FlyBase:FBgn0037255 InParanoid:Q9VN31 OMA:FEGAGTI OrthoDB:EOG4G4F64
PhylomeDB:Q9VN31 GenomeRNAi:40569 NextBio:819441
ArrayExpress:Q9VN31 Bgee:Q9VN31 Uniprot:Q9VN31
Length = 701
Score = 248 (92.4 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 44/67 (65%), Positives = 52/67 (77%)
Query: 43 AFSDIAQNPDPQGKFTVEEFEQIGTINSTAPHEFNLDQLEDKPWRKPGADITDYFNYGFT 102
A D A+ GKF++E+FE GTIN A HEF++D LE+KPWRKPGADITDYFNYGF
Sbjct: 187 AAGDKAKPAGQAGKFSIEDFEGAGTINGVAVHEFSIDSLEEKPWRKPGADITDYFNYGFN 246
Query: 103 EETWRAH 109
EETWRA+
Sbjct: 247 EETWRAY 253
Score = 46 (21.3 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 12 GDQAGQNTGDPNTTEPPQPDPKEQSSFSELPAFSDIAQ 49
G++ G + G +T + P+ +E +SE F D AQ
Sbjct: 51 GEKPGASAGTNSTEDSPRCPKEEVPEYSE---FDDPAQ 85
>UNIPROTKB|Q6UN15 [details] [associations]
symbol:FIP1L1 "Pre-mRNA 3'-end-processing factor FIP1"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] GO:GO:0005634 GO:GO:0006397 GO:GO:0003723
GO:GO:0005847 eggNOG:COG5213 KO:K14405 InterPro:IPR007854
Pfam:PF05182 OrthoDB:EOG4S4PGB EMBL:AY366510 EMBL:AL136910
EMBL:BC011543 EMBL:BC017724 EMBL:BC024016 EMBL:BC052959
EMBL:BC110383 EMBL:AY229892 IPI:IPI00008449 IPI:IPI00395337
IPI:IPI00965581 RefSeq:NP_001128409.1 RefSeq:NP_001128410.1
RefSeq:NP_112179.2 UniGene:Hs.624245 ProteinModelPortal:Q6UN15
DIP:DIP-42503N IntAct:Q6UN15 MINT:MINT-1475441 STRING:Q6UN15
PhosphoSite:Q6UN15 DMDM:74749365 PaxDb:Q6UN15 PeptideAtlas:Q6UN15
PRIDE:Q6UN15 DNASU:81608 Ensembl:ENST00000306932
Ensembl:ENST00000337488 Ensembl:ENST00000507166
Ensembl:ENST00000507922 GeneID:81608 KEGG:hsa:81608 UCSC:uc003gzx.4
UCSC:uc003gzy.3 UCSC:uc003gzz.3 CTD:81608 GeneCards:GC04P054159
HGNC:HGNC:19124 HPA:HPA037475 MIM:607685 MIM:607686
neXtProt:NX_Q6UN15 Orphanet:3260 PharmGKB:PA134875694
HOVERGEN:HBG059889 InParanoid:Q6UN15 OMA:GNNIQVI PhylomeDB:Q6UN15
ChiTaRS:FIP1L1 GenomeRNAi:81608 NextBio:71928 PMAP-CutDB:Q6UN15
ArrayExpress:Q6UN15 Bgee:Q6UN15 CleanEx:HS_FIP1L1
Genevestigator:Q6UN15 GermOnline:ENSG00000145216 Uniprot:Q6UN15
Length = 594
Score = 170 (64.9 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 66 GTINSTAPHEFNLDQLEDKPWRKPGADITDYFNYGFTEETWRAH 109
G+IN E +LD EDKPWRKPGAD++DYFNYGF E+TW+A+
Sbjct: 145 GSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAY 188
Score = 46 (21.3 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 5 EDDQWLYG---DQAGQNTGDPNTTEPPQPDPKEQSSFSELPAF--SDIAQNPDPQGKFTV 59
E+++WLYG D + + E P+E+++ + P+ + A+N P+ K T
Sbjct: 21 EEEEWLYGGPWDVHVHSDLAKDLDENEVERPEEENASANPPSGIEDETAENGVPKPKVTE 80
Query: 60 EE 61
E
Sbjct: 81 TE 82
>ZFIN|ZDB-GENE-041010-138 [details] [associations]
symbol:fip1l1b "FIP1 like 1b (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] ZFIN:ZDB-GENE-041010-138
GO:GO:0005634 GO:GO:0006397 eggNOG:COG5213 KO:K14405
InterPro:IPR007854 Pfam:PF05182 EMBL:BC083370 IPI:IPI00508997
RefSeq:NP_001006042.1 UniGene:Dr.36945 STRING:Q5XJD3 PRIDE:Q5XJD3
GeneID:450021 KEGG:dre:450021 CTD:450021 HOGENOM:HOG000004854
HOVERGEN:HBG096024 InParanoid:Q5XJD3 OrthoDB:EOG4S4PGB
NextBio:20833004 ArrayExpress:Q5XJD3 Uniprot:Q5XJD3
Length = 570
Score = 163 (62.4 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 61 EFEQIGTINSTAPHEFNLDQLEDKPWRKPGADITDYFNYGFTEETWRAH 109
+ E G+IN E +++ E+KPWRKPGAD++DYFNYGF E+TW+A+
Sbjct: 149 DLEAPGSINGVPVLEADMESFEEKPWRKPGADLSDYFNYGFNEDTWKAY 197
Score = 48 (22.0 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 2 AETEDDQWLYGDQ 14
A E+++WLYGD+
Sbjct: 16 AGDEEEEWLYGDE 28
>UNIPROTKB|E1BKM0 [details] [associations]
symbol:E1BKM0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005847 "mRNA cleavage and polyadenylation specificity
factor complex" evidence=IEA] GO:GO:0005847 InterPro:IPR007854
Pfam:PF05182 OMA:GNNIQVI GeneTree:ENSGT00690000102147
EMBL:DAAA02017681 EMBL:DAAA02017684 EMBL:DAAA02017682
EMBL:DAAA02017683 IPI:IPI00691560 Ensembl:ENSBTAT00000027525
Uniprot:E1BKM0
Length = 597
Score = 170 (64.9 bits), Expect = 9.2e-14, Sum P(2) = 9.2e-14
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 66 GTINSTAPHEFNLDQLEDKPWRKPGADITDYFNYGFTEETWRAH 109
G+IN E +LD EDKPWRKPGAD++DYFNYGF E+TW+A+
Sbjct: 147 GSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAY 190
Score = 41 (19.5 bits), Expect = 9.2e-14, Sum P(2) = 9.2e-14
Identities = 17/66 (25%), Positives = 28/66 (42%)
Query: 5 EDDQWLYGD--------QAGQNTGDPNTTEPPQPDPKEQSSFSELPAFSD-IAQNPDPQG 55
E+++WLYG ++ D N E P+ +E +S + D +N P+
Sbjct: 21 EEEEWLYGGPWDVHVHTDLAKDLVDENEVERPE---EENASANPPSGIEDETPENGVPKP 77
Query: 56 KFTVEE 61
K T E
Sbjct: 78 KVTETE 83
>RGD|1309336 [details] [associations]
symbol:Fip1l1 "FIP1 like 1 (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] RGD:1309336 GO:GO:0005634 GO:GO:0006397 GO:GO:0003723
eggNOG:COG5213 KO:K14405 InterPro:IPR007854 Pfam:PF05182
HOGENOM:HOG000004854 CTD:81608 HOVERGEN:HBG059889
GeneTree:ENSGT00690000102147 EMBL:BC085767 IPI:IPI00361823
RefSeq:NP_001008296.1 UniGene:Rn.138993 STRING:Q5U317
PhosphoSite:Q5U317 Ensembl:ENSRNOT00000045050 GeneID:289582
KEGG:rno:289582 UCSC:RGD:1309336 NextBio:630008 ArrayExpress:Q5U317
Genevestigator:Q5U317 GermOnline:ENSRNOG00000002275 Uniprot:Q5U317
Length = 536
Score = 170 (64.9 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 66 GTINSTAPHEFNLDQLEDKPWRKPGADITDYFNYGFTEETWRAH 109
G+IN E +LD EDKPWRKPGAD++DYFNYGF E+TW+A+
Sbjct: 144 GSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAY 187
Score = 39 (18.8 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 5/8 (62%), Positives = 8/8 (100%)
Query: 5 EDDQWLYG 12
E+++WLYG
Sbjct: 20 EEEEWLYG 27
>UNIPROTKB|Q5U317 [details] [associations]
symbol:Fip1l1 "Pre-mRNA 3'-end-processing factor FIP1"
species:10116 "Rattus norvegicus" [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
RGD:1309336 GO:GO:0005634 GO:GO:0006397 GO:GO:0003723
eggNOG:COG5213 KO:K14405 InterPro:IPR007854 Pfam:PF05182
HOGENOM:HOG000004854 CTD:81608 HOVERGEN:HBG059889
GeneTree:ENSGT00690000102147 EMBL:BC085767 IPI:IPI00361823
RefSeq:NP_001008296.1 UniGene:Rn.138993 STRING:Q5U317
PhosphoSite:Q5U317 Ensembl:ENSRNOT00000045050 GeneID:289582
KEGG:rno:289582 UCSC:RGD:1309336 NextBio:630008 ArrayExpress:Q5U317
Genevestigator:Q5U317 GermOnline:ENSRNOG00000002275 Uniprot:Q5U317
Length = 536
Score = 170 (64.9 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 66 GTINSTAPHEFNLDQLEDKPWRKPGADITDYFNYGFTEETWRAH 109
G+IN E +LD EDKPWRKPGAD++DYFNYGF E+TW+A+
Sbjct: 144 GSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAY 187
Score = 39 (18.8 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 5/8 (62%), Positives = 8/8 (100%)
Query: 5 EDDQWLYG 12
E+++WLYG
Sbjct: 20 EEEEWLYG 27
>MGI|MGI:1914149 [details] [associations]
symbol:Fip1l1 "FIP1 like 1 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IDA] [GO:0006378 "mRNA polyadenylation"
evidence=IC] [GO:0006397 "mRNA processing" evidence=IEA]
MGI:MGI:1914149 GO:GO:0006378 GO:GO:0003723 GO:GO:0005847
eggNOG:COG5213 KO:K14405 InterPro:IPR007854 Pfam:PF05182
HOGENOM:HOG000004854 OrthoDB:EOG4S4PGB CTD:81608 HOVERGEN:HBG059889
ChiTaRS:FIP1L1 EMBL:AK005061 EMBL:AK008561 EMBL:AK049672
EMBL:AK164105 EMBL:BC003263 IPI:IPI00110716 IPI:IPI00116897
IPI:IPI00119501 IPI:IPI00667065 RefSeq:NP_001153045.1
RefSeq:NP_001153046.1 RefSeq:NP_077145.2 UniGene:Mm.272468
ProteinModelPortal:Q9D824 IntAct:Q9D824 STRING:Q9D824
PhosphoSite:Q9D824 PaxDb:Q9D824 PRIDE:Q9D824
Ensembl:ENSMUST00000080164 Ensembl:ENSMUST00000113534
Ensembl:ENSMUST00000113535 Ensembl:ENSMUST00000113536 GeneID:66899
KEGG:mmu:66899 UCSC:uc008xtm.2 UCSC:uc008xtn.2 UCSC:uc008xto.2
UCSC:uc008xtp.2 GeneTree:ENSGT00690000102147 NextBio:322965
Bgee:Q9D824 CleanEx:MM_FIP1L1 Genevestigator:Q9D824 Uniprot:Q9D824
Length = 581
Score = 170 (64.9 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 66 GTINSTAPHEFNLDQLEDKPWRKPGADITDYFNYGFTEETWRAH 109
G+IN E +LD EDKPWRKPGAD++DYFNYGF E+TW+A+
Sbjct: 144 GSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAY 187
Score = 39 (18.8 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 5/8 (62%), Positives = 8/8 (100%)
Query: 5 EDDQWLYG 12
E+++WLYG
Sbjct: 20 EEEEWLYG 27
>UNIPROTKB|E1BWP4 [details] [associations]
symbol:Gga.5511 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=IEA] GO:GO:0005847
InterPro:IPR007854 Pfam:PF05182 OMA:GNNIQVI
GeneTree:ENSGT00690000102147 EMBL:AADN02031298 EMBL:AADN02031299
EMBL:AADN02031300 EMBL:AADN02031301 EMBL:AADN02031302
IPI:IPI00684130 Ensembl:ENSGALT00000022597 ArrayExpress:E1BWP4
Uniprot:E1BWP4
Length = 580
Score = 169 (64.5 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 66 GTINSTAPHEFNLDQLEDKPWRKPGADITDYFNYGFTEETWRAH 109
G IN E +LD EDKPWRKPGAD++DYFNYGF E+TW+A+
Sbjct: 144 GNINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAY 187
Score = 40 (19.1 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 2 AETEDDQWLYG 12
A E+++WLYG
Sbjct: 16 AVDEEEEWLYG 26
>WB|WBGene00017988 [details] [associations]
symbol:fipp-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] GO:GO:0009792 EMBL:FO081012 eggNOG:COG5213 KO:K14405
InterPro:IPR007854 Pfam:PF05182 GeneTree:ENSGT00690000102147
PIR:T03916 RefSeq:NP_504203.1 ProteinModelPortal:O16293
IntAct:O16293 STRING:O16293 PaxDb:O16293 EnsemblMetazoa:F32D1.9.1
EnsemblMetazoa:F32D1.9.2 GeneID:178835 KEGG:cel:CELE_F32D1.9
UCSC:F32D1.9.1 CTD:178835 WormBase:F32D1.9 InParanoid:O16293
OMA:DQWLYGD NextBio:902752 Uniprot:O16293
Length = 513
Score = 178 (67.7 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 32/56 (57%), Positives = 40/56 (71%)
Query: 54 QGKFTVEEFEQIGTINSTAPHEFNLDQLEDKPWRKPGADITDYFNYGFTEETWRAH 109
QGK + + TIN ++ +L Q+ED+PWRKPGADITDYFNYGFTEETW +
Sbjct: 116 QGKL---DLDTTATINDKPIYDLDLAQMEDRPWRKPGADITDYFNYGFTEETWNLY 168
>DICTYBASE|DDB_G0288797 [details] [associations]
symbol:fip1l1 "cleavage and polyadenylation
specificity factor FIP1" species:44689 "Dictyostelium discoideum"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0006379 "mRNA cleavage"
evidence=ISS] [GO:0006378 "mRNA polyadenylation" evidence=ISS]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=ISS] dictyBase:DDB_G0288797 GO:GO:0006378
GenomeReviews:CM000154_GR EMBL:AAFI02000125 GO:GO:0005847
GO:GO:0006379 eggNOG:COG5213 InterPro:IPR007854 Pfam:PF05182
RefSeq:XP_636526.1 EnsemblProtists:DDB0233703 GeneID:8626811
KEGG:ddi:DDB_G0288797 InParanoid:Q54IF1 OMA:AYCERQN Uniprot:Q54IF1
Length = 560
Score = 155 (59.6 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 25/41 (60%), Positives = 32/41 (78%)
Query: 69 NSTAPHEFNLDQLEDKPWRKPGADITDYFNYGFTEETWRAH 109
N EF+++ E+KPW KPGADI+DYFNY FTEETW+A+
Sbjct: 146 NQKTIFEFDIESFEEKPWLKPGADISDYFNYNFTEETWKAY 186
Score = 32 (16.3 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 7/21 (33%), Positives = 9/21 (42%)
Query: 1 MAETEDDQWLYGDQAGQNTGD 21
M E D GD G+N +
Sbjct: 15 MNEPTDKTTTEGDNGGENENE 35
Score = 32 (16.3 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 6/27 (22%), Positives = 12/27 (44%)
Query: 14 QAGQNTGDPNTTEPPQPDPKEQSSFSE 40
+ G+N D N + + +E+ E
Sbjct: 41 EGGENQEDNNNNNEGEEEEEEEEEEEE 67
>POMBASE|SPAC22G7.10 [details] [associations]
symbol:SPAC22G7.10 "mRNA cleavage and polyadenylation
specificity factor complex subunit, Fip1 homolog (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=IDA] [GO:0006378 "mRNA polyadenylation" evidence=ISO]
[GO:0006379 "mRNA cleavage" evidence=ISO] PomBase:SPAC22G7.10
GO:GO:0005829 EMBL:CU329670 GO:GO:0006378 GO:GO:0005847
GO:GO:0006379 PIR:T11620 RefSeq:NP_593059.1 STRING:Q09801
EnsemblFungi:SPAC22G7.10.1 GeneID:2541873 KEGG:spo:SPAC22G7.10
eggNOG:COG5213 KO:K14405 OrthoDB:EOG4K6KDG NextBio:20802960
InterPro:IPR007854 Pfam:PF05182 Uniprot:Q09801
Length = 344
Score = 157 (60.3 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 39/103 (37%), Positives = 53/103 (51%)
Query: 12 GDQAGQNTGDPNTTEPPQPDPKEQSSFSELPAFSDIAQNPDPQGKFTVE-----EFEQIG 66
G++A G T +P K Q E A + +PQ T E + + +
Sbjct: 57 GERAEPLGGSIATLGSTRPSAKPQV---EKTAVE--VKTTEPQDLSTAETAPKVDIDAVP 111
Query: 67 TINSTAPHEFNLDQLEDKPWRKPGADITDYFNYGFTEETWRAH 109
TI+ E +L+ +DKPWRKPGADI+DYFNYGF E TW A+
Sbjct: 112 TIDGKNIFEIDLESFDDKPWRKPGADISDYFNYGFDEFTWAAY 154
>CGD|CAL0000262 [details] [associations]
symbol:orf19.4258 species:5476 "Candida albicans" [GO:0042493
"response to drug" evidence=IMP] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0006379 "mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0030674 "protein binding, bridging" evidence=IEA]
CGD:CAL0000262 GO:GO:0005634 GO:GO:0042493 GO:GO:0006397
EMBL:AACQ01000021 EMBL:AACQ01000022 eggNOG:COG5213 KO:K14405
InterPro:IPR007854 Pfam:PF05182 RefSeq:XP_720566.1
RefSeq:XP_720694.1 STRING:Q5AGC1 GeneID:3637596 GeneID:3637762
KEGG:cal:CaO19.11734 KEGG:cal:CaO19.4258 Uniprot:Q5AGC1
Length = 326
Score = 132 (51.5 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 30/86 (34%), Positives = 45/86 (52%)
Query: 31 DPKEQSSFSELPAFSDIAQNPDPQGKFTVE-------EFEQIGTINSTAPHEFNLDQLED 83
DP+E +S S A + Q T+ + E+ G + T + +++ L+
Sbjct: 108 DPEESTSSSSTTAAAGTTTINKRQSSSTINLESVPRYQQEEDGEGDGTLITQLDIETLKL 167
Query: 84 KPWRKPGADITDYFNYGFTEETWRAH 109
KPWR PG D++DYFNYGF E TW A+
Sbjct: 168 KPWRAPGVDVSDYFNYGFDEFTWLAY 193
Score = 35 (17.4 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 1 MAETEDDQ-WLYGDQ 14
MA ++DD +LY D+
Sbjct: 1 MANSDDDDAFLYSDE 15
>UNIPROTKB|Q5AGC1 [details] [associations]
symbol:FIP1 "Pre-mRNA polyadenylation factor FIP1"
species:237561 "Candida albicans SC5314" [GO:0042493 "response to
drug" evidence=IMP] CGD:CAL0000262 GO:GO:0005634 GO:GO:0042493
GO:GO:0006397 EMBL:AACQ01000021 EMBL:AACQ01000022 eggNOG:COG5213
KO:K14405 InterPro:IPR007854 Pfam:PF05182 RefSeq:XP_720566.1
RefSeq:XP_720694.1 STRING:Q5AGC1 GeneID:3637596 GeneID:3637762
KEGG:cal:CaO19.11734 KEGG:cal:CaO19.4258 Uniprot:Q5AGC1
Length = 326
Score = 132 (51.5 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 30/86 (34%), Positives = 45/86 (52%)
Query: 31 DPKEQSSFSELPAFSDIAQNPDPQGKFTVE-------EFEQIGTINSTAPHEFNLDQLED 83
DP+E +S S A + Q T+ + E+ G + T + +++ L+
Sbjct: 108 DPEESTSSSSTTAAAGTTTINKRQSSSTINLESVPRYQQEEDGEGDGTLITQLDIETLKL 167
Query: 84 KPWRKPGADITDYFNYGFTEETWRAH 109
KPWR PG D++DYFNYGF E TW A+
Sbjct: 168 KPWRAPGVDVSDYFNYGFDEFTWLAY 193
Score = 35 (17.4 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 1 MAETEDDQ-WLYGDQ 14
MA ++DD +LY D+
Sbjct: 1 MANSDDDDAFLYSDE 15
>SGD|S000003853 [details] [associations]
symbol:FIP1 "Subunit of cleavage polyadenylation factor
(CPF)" species:4932 "Saccharomyces cerevisiae" [GO:0006378 "mRNA
polyadenylation" evidence=IDA] [GO:0006379 "mRNA cleavage"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IMP] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IGI;IMP;IPI]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IDA] SGD:S000003853 EMBL:BK006943 GO:GO:0006378
GO:GO:0030674 GO:GO:0005847 GO:GO:0006379 eggNOG:COG5213 KO:K14405
OrthoDB:EOG4K6KDG InterPro:IPR007854 Pfam:PF05182
GeneTree:ENSGT00690000102147 EMBL:X83796 EMBL:Z49593 PIR:A56545
RefSeq:NP_012626.1 PDB:3C66 PDBsum:3C66 ProteinModelPortal:P45976
DIP:DIP-2029N IntAct:P45976 MINT:MINT-383835 STRING:P45976
PaxDb:P45976 EnsemblFungi:YJR093C GeneID:853555 KEGG:sce:YJR093C
CYGD:YJR093c HOGENOM:HOG000000819 OMA:TWMEYLH
EvolutionaryTrace:P45976 NextBio:974296 Genevestigator:P45976
GermOnline:YJR093C Uniprot:P45976
Length = 327
Score = 123 (48.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 61 EFEQIGTINSTAPHEFNLDQLEDKPWRKPGADITDYFNYGFTEETW 106
+ ++ G +S + + L++KPWR+PGA+++DYFNYGF E TW
Sbjct: 165 DLDKEGIFDSVGITTIDPEVLKEKPWRQPGANLSDYFNYGFNEFTW 210
Score = 42 (19.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 2 AETEDDQWLYGDQA 15
+E EDD++LYG +
Sbjct: 4 SEDEDDKFLYGSDS 17
>TAIR|locus:2155806 [details] [associations]
symbol:FIP1[V] "homolog of yeast FIP1 [V]" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0003723 "RNA
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006397 "mRNA processing" evidence=RCA] [GO:0008284 "positive
regulation of cell proliferation" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] EMBL:CP002688 GO:GO:0003723
InterPro:IPR007854 Pfam:PF05182 IPI:IPI00524599 RefSeq:NP_200612.2
UniGene:At.43567 PRIDE:F4KDH9 EnsemblPlants:AT5G58040.1
GeneID:835916 KEGG:ath:AT5G58040 OMA:YCKQLDQ ArrayExpress:F4KDH9
Uniprot:F4KDH9
Length = 1196
Score = 125 (49.1 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 75 EFNLDQLEDKPWRKPGADITDYFNYGFTEETWR 107
E ++D E+KPWR PG ++TDYFN+G EE+W+
Sbjct: 337 EVDIDSFEEKPWRYPGVEMTDYFNFGLNEESWK 369
Score = 40 (19.1 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 12 GDQAGQNTGDPNTTEPPQ 29
G +AG+ +G T PP+
Sbjct: 223 GGEAGKGSGPGGATGPPK 240
>ASPGD|ASPL0000044774 [details] [associations]
symbol:AN2433 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] GO:GO:0005634 EMBL:BN001307 GO:GO:0006397
eggNOG:COG5213 KO:K14405 OrthoDB:EOG4K6KDG InterPro:IPR007854
Pfam:PF05182 EMBL:AACD01000040 RefSeq:XP_660037.1 GeneID:2874664
KEGG:ani:AN2433.2 HOGENOM:HOG000216541 OMA:NIITEAP Uniprot:Q5BAJ7
Length = 327
Score = 127 (49.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 19/28 (67%), Positives = 24/28 (85%)
Query: 82 EDKPWRKPGADITDYFNYGFTEETWRAH 109
+DKPWR+PG D+TDYFNYGF E TW ++
Sbjct: 161 DDKPWRRPGTDLTDYFNYGFDEFTWASY 188
>UNIPROTKB|G4NIC0 [details] [associations]
symbol:MGG_14293 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] EMBL:CM001236 KO:K14405 InterPro:IPR007854
Pfam:PF05182 RefSeq:XP_003720347.1 EnsemblFungi:MGG_14293T0
GeneID:5051781 KEGG:mgr:MGG_14293 Uniprot:G4NIC0
Length = 332
Score = 118 (46.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 29/78 (37%), Positives = 43/78 (55%)
Query: 30 PDPKEQS-SFSELPAFSDIAQNPDPQGKFTVEEFEQIGTINSTAPHEFNLDQLEDKPWRK 88
P+ KE + S+LP + N DP + + E + G + + +L + + PWRK
Sbjct: 116 PNKKEDTVKGSDLPPVTK--SNFDP---YAIPEHKPTGKPLTQVNIDEDLGE-DAAPWRK 169
Query: 89 PGADITDYFNYGFTEETW 106
PG DI+DYFNYGF E +W
Sbjct: 170 PGTDISDYFNYGFDEFSW 187
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.309 0.130 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 114 114 0.00091 102 3 11 23 0.44 31
29 0.44 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 543 (58 KB)
Total size of DFA: 140 KB (2088 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.64u 0.10s 16.74t Elapsed: 00:00:05
Total cpu time: 16.64u 0.10s 16.74t Elapsed: 00:00:05
Start: Thu Aug 15 15:03:27 2013 End: Thu Aug 15 15:03:32 2013