BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy880
(263 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VGH7|CLCN2_DROME Chloride channel protein 2 OS=Drosophila melanogaster GN=ClC-a PE=2
SV=3
Length = 1193
Score = 277 bits (708), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 167/309 (54%), Positives = 203/309 (65%), Gaps = 52/309 (16%)
Query: 3 EDESMLDTEWEDFDKLMTEYKRRRMHVTASPLLHRRHSSKH-QTQSQSFYPCPPPANLGE 61
E+ ++D+EW DF+K + + ++RR + S RH +H + +S +FYPCPPPA
Sbjct: 32 ENVELVDSEWADFEKFICQLRKRR-NSAMSMEEELRHVQRHPKIKSHAFYPCPPPAENAR 90
Query: 62 SDELQEYDASPG-----MYGRYTKELGEFAKEEAKKLNKKRKKDRLQADELRNK-YRGRC 115
+ + D G MYGRYTK+LGEFAK+EA+KL K +K R Q D+ RNK G+
Sbjct: 91 DSDSSDDDDPIGYIDTLMYGRYTKDLGEFAKDEARKL-KILEKRRKQEDKQRNKELLGKH 149
Query: 116 ATKFAAVFRFVWKHTFAKLGEDWVFLALLGIIMATISFFMDRGINIIGRS---------- 165
+T+ V ++W+HT A+LGEDWVFLALLGIIMA +SF MD+GI+I +
Sbjct: 150 STRAKRVSSWIWRHTVARLGEDWVFLALLGIIMALLSFIMDKGISICTNARIWLYRDLTS 209
Query: 166 ---------------------------------SGIPEMKTILRGVALKEYLTFNTLVAK 192
SGIPEMKTILRGV LKEYLTF TLVAK
Sbjct: 210 QPFVQYIAWVSLPVCLILFSAGFVHLIAPQSIGSGIPEMKTILRGVQLKEYLTFKTLVAK 269
Query: 193 IIGLTATLGSGLPLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLAAACAVGV 252
+IGLTATLGSG+PLGKEGPFVHIASIVA LLSKLVTSFQGIYENESRNSEMLAAACAVGV
Sbjct: 270 VIGLTATLGSGMPLGKEGPFVHIASIVAQLLSKLVTSFQGIYENESRNSEMLAAACAVGV 329
Query: 253 GSCFGAPIG 261
G+CF AP+G
Sbjct: 330 GACFAAPVG 338
>sp|P51788|CLCN2_HUMAN Chloride channel protein 2 OS=Homo sapiens GN=CLCN2 PE=1 SV=2
Length = 898
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 140/237 (59%), Gaps = 50/237 (21%)
Query: 74 MYGRYTKELGEFAKEEAKKLNK------KRKKDRLQADELRNKYRGRCATKFAAVFRFVW 127
MYGRYT++LG FAKEEA ++ K A EL R RCA R
Sbjct: 22 MYGRYTQDLGAFAKEEAARIRLGGPEPWKGPPSSRAAPELLEYGRSRCARCRVCSVR-CH 80
Query: 128 KHTFAKLGEDWVFLALLGIIMATISFFMD--------------RGIN------------- 160
K +++GEDW+FL LLG++MA +S+ MD RG+N
Sbjct: 81 KFLVSRVGEDWIFLVLLGLLMALVSWVMDYAIAACLQAQQWMSRGLNTSILLQYLAWVTY 140
Query: 161 ---IIGRS-------------SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGL 204
+I S SGIPEMKTILRGV LKEYLT T +AK+IGLT LGSG+
Sbjct: 141 PVVLITFSAGFTQILAPQAVGSGIPEMKTILRGVVLKEYLTLKTFIAKVIGLTCALGSGM 200
Query: 205 PLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPIG 261
PLGKEGPFVHIAS+ A LLSK ++ F GIYENESRN+EMLAAACAVGVG CF APIG
Sbjct: 201 PLGKEGPFVHIASMCAALLSKFLSLFGGIYENESRNTEMLAAACAVGVGCCFAAPIG 257
>sp|Q9WU45|CLCN2_CAVPO Chloride channel protein 2 OS=Cavia porcellus GN=CLCN2 PE=2 SV=1
Length = 902
Score = 187 bits (474), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 116/240 (48%), Positives = 139/240 (57%), Gaps = 52/240 (21%)
Query: 74 MYGRYTKELGEFAKEEAKKLN-------KKRKKDRLQADELRNKYRGRCATKFAAVFRFV 126
MYGRYT+ELG FAKEEA ++ K R+ EL + RCA R
Sbjct: 24 MYGRYTQELGAFAKEEAARIRLGGPEPWKGPPSPRV-PPELLEYGQSRCAPCCICSVR-C 81
Query: 127 WKHTFAKLGEDWVFLALLGIIMATISFFMDRGINIIGRS--------------------- 165
K +++GEDW+FL LLG++MA +S+ MD I + ++
Sbjct: 82 HKFLVSRVGEDWIFLVLLGLLMALVSWAMDYAIAVCLQAQQWMSQGLNTNILLQYLAWVT 141
Query: 166 ----------------------SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSG 203
SGIPEMKTILRGV LKEYLT T VAK+IGLT LGSG
Sbjct: 142 YPVVLITFSAGFTQILAPQAVGSGIPEMKTILRGVVLKEYLTLKTFVAKVIGLTCALGSG 201
Query: 204 LPLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPIGAT 263
+PLGKEGPFVHIAS+ A+LLSK ++ F GIYENESRN+EMLAAACAVGVG CF APIG
Sbjct: 202 MPLGKEGPFVHIASMCASLLSKFLSLFGGIYENESRNTEMLAAACAVGVGCCFAAPIGGV 261
>sp|P35525|CLCN2_RAT Chloride channel protein 2 OS=Rattus norvegicus GN=Clcn2 PE=2 SV=1
Length = 907
Score = 186 bits (472), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 139/237 (58%), Gaps = 50/237 (21%)
Query: 74 MYGRYTKELGEFAKEEAKKLNK------KRKKDRLQADELRNKYRGRCATKFAAVFRFVW 127
MYGRYT+ELG FAKEEA ++ K EL + RCA R
Sbjct: 28 MYGRYTQELGAFAKEEAARIRLGGPEPWKGSPSARATPELLEYGQSRCARCRICSVR-CH 86
Query: 128 KHTFAKLGEDWVFLALLGIIMATISFFMD--------------RGIN------------- 160
K +++GEDW+FL LLG++MA +S+ MD RG+N
Sbjct: 87 KFLVSRVGEDWIFLVLLGLLMALVSWAMDYAIAVCLQAQQWMSRGLNTNILLQYLAWVTY 146
Query: 161 ---IIGRS-------------SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGL 204
+I S SGIPEMKTILRGV LKEYLT T VAK+IGLT LGSG+
Sbjct: 147 PVVLITFSAGFTQILAPQAVGSGIPEMKTILRGVVLKEYLTLKTFVAKVIGLTCALGSGM 206
Query: 205 PLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPIG 261
PLGKEGPFVHIAS+ A LLSK ++ F GIYENESRN+EMLAAACAVGVG CF APIG
Sbjct: 207 PLGKEGPFVHIASMCAALLSKFLSLFGGIYENESRNTEMLAAACAVGVGCCFAAPIG 263
>sp|Q9R0A1|CLCN2_MOUSE Chloride channel protein 2 OS=Mus musculus GN=Clcn2 PE=2 SV=2
Length = 908
Score = 184 bits (467), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 118/237 (49%), Positives = 139/237 (58%), Gaps = 50/237 (21%)
Query: 74 MYGRYTKELGEFAKEEAKKLNK------KRKKDRLQADELRNKYRGRCATKFAAVFRFVW 127
MYGRYT+ELG FAKEEA ++ K EL + RCA R
Sbjct: 30 MYGRYTQELGAFAKEEAARIRLGGPEPWKGSPSARATPELLEYGQSRCARCRICSVR-CH 88
Query: 128 KHTFAKLGEDWVFLALLGIIMATISFFMD--------------RGIN------------- 160
K +++GEDW+FL LLG++MA +S+ MD RG+N
Sbjct: 89 KFLVSRVGEDWIFLVLLGLLMALVSWAMDYAIAVCLQAQQWMSRGLNTNILLQYLAWVTY 148
Query: 161 ---IIGRS-------------SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGL 204
+I S SGIPEMKTILRGV LKEYLT T VAK+IGLT LGSG+
Sbjct: 149 PVVLITFSAGFTQILAPQAVGSGIPEMKTILRGVVLKEYLTLKTFVAKVIGLTCALGSGM 208
Query: 205 PLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPIG 261
PLGKEGPFVHIAS+ A LLSK ++ F GIYE+ESRN+EMLAAACAVGVG CF APIG
Sbjct: 209 PLGKEGPFVHIASMCAALLSKFLSLFGGIYEHESRNTEMLAAACAVGVGCCFAAPIG 265
>sp|P51789|CLCN2_RABIT Chloride channel protein 2 OS=Oryctolagus cuniculus GN=CLCN2 PE=2
SV=1
Length = 898
Score = 184 bits (466), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 117/237 (49%), Positives = 139/237 (58%), Gaps = 50/237 (21%)
Query: 74 MYGRYTKELGEFAKEEAKKLNK------KRKKDRLQADELRNKYRGRCATKFAAVFRFVW 127
MYGRYT++LG FAKEEA ++ + EL + RCA R
Sbjct: 25 MYGRYTQDLGAFAKEEAARIRLGGPEPWRSPPSPRTPPELLEYGQSRCARCRMCSVR-CH 83
Query: 128 KHTFAKLGEDWVFLALLGIIMATISFFMD--------------RGIN------------- 160
K +++GEDW+FL LLG++MA +S+ MD RG+N
Sbjct: 84 KFLVSRVGEDWIFLVLLGLLMALVSWAMDYAIAACLQAQQWMSRGLNTNLLLQYLAWVTY 143
Query: 161 ---IIGRS-------------SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGL 204
+I S SGIPEMKTILRGV LKEYLT T VAK+IGLT LGSG+
Sbjct: 144 PVVLITFSAGFTQILAPQAVGSGIPEMKTILRGVVLKEYLTLKTFVAKVIGLTCALGSGM 203
Query: 205 PLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPIG 261
PLGKEGPFVHIAS+ A LLSK ++ F GIYENESRN+EMLAAACAVGVG CF APIG
Sbjct: 204 PLGKEGPFVHIASMCAALLSKFLSLFGGIYENESRNTEMLAAACAVGVGCCFAAPIG 260
>sp|Q9MZT1|CLCN1_CANFA Chloride channel protein 1 OS=Canis familiaris GN=CLCN1 PE=1 SV=1
Length = 976
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 120/235 (51%), Gaps = 54/235 (22%)
Query: 74 MYGRYTKELGEFAKEE--AKKLNKKRKKDRLQADELRNKYRGRCATKFAAVFRFVWKHTF 131
+YG Y ++ + ++ +KK+ D D +K +G C + V R
Sbjct: 61 IYGHYKQQFSDKEQDTGMSKKMGSSESMDSKDEDHY-SKCQG-CVRRLGHVVR------- 111
Query: 132 AKLGEDWVFLALLGIIMATISFFMD----------------------------------- 156
KLGEDW+FL LLG++MA +S+ MD
Sbjct: 112 RKLGEDWIFLVLLGLLMALVSWSMDYVSAKSLQAYKWSYYQMQPNLPLQYLVWVTFPLTL 171
Query: 157 --------RGINIIGRSSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGK 208
I+ SGIPEMKTILRGV LKEYLT VAK++ LTA LGSG+P+GK
Sbjct: 172 ILFSAVFCHLISPQAVGSGIPEMKTILRGVILKEYLTLKAFVAKVVALTAGLGSGIPVGK 231
Query: 209 EGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPIGAT 263
EGPFVHIASI A +LSK ++ F G+YE ++ML CAVGVG CFG P+G
Sbjct: 232 EGPFVHIASICAAVLSKFMSMFCGVYEQPYYYTDMLTVGCAVGVGCCFGTPLGGV 286
>sp|P35524|CLCN1_RAT Chloride channel protein 1 OS=Rattus norvegicus GN=Clcn1 PE=2 SV=1
Length = 994
Score = 137 bits (346), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 122/242 (50%), Gaps = 55/242 (22%)
Query: 68 YDASPG-MYGRYTKELGEFAKEEA--KKLNKKRKKDRLQADELRNKYRGRCATKFAAVFR 124
++A P +YG + ++ A++ KK + D L DE C + V R
Sbjct: 54 HNAHPTQIYGHHKEQYSYQAQDRGIPKKTDSSSTVDSL--DEDHYSKCQDCVHRLGRVLR 111
Query: 125 FVWKHTFAKLGEDWVFLALLGIIMATISFFMD---------------------------- 156
KLGEDW+FL LLG++MA +S+ MD
Sbjct: 112 -------RKLGEDWIFLVLLGLLMALVSWCMDYVSAKSLQAYKWTYAQMQPSLPLQYLAW 164
Query: 157 ---------------RGINIIGRSSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLG 201
+ I+ SGIPEMKTILRGV LKEYLT VAK++ LTA LG
Sbjct: 165 VTFPLILILFSALFCQLISPQAVGSGIPEMKTILRGVVLKEYLTLKAFVAKVVALTAGLG 224
Query: 202 SGLPLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPIG 261
SG+P+GKEGPFVHIASI A +LSK ++ F G+YE +++L CAVGVG CFG P+G
Sbjct: 225 SGIPVGKEGPFVHIASICAAVLSKFMSMFSGVYEQPYYYTDILTVGCAVGVGCCFGTPLG 284
Query: 262 AT 263
Sbjct: 285 GV 286
>sp|P35523|CLCN1_HUMAN Chloride channel protein 1 OS=Homo sapiens GN=CLCN1 PE=1 SV=3
Length = 988
Score = 137 bits (345), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 85/126 (67%), Gaps = 3/126 (2%)
Query: 138 WVFLALLGIIMATISFFMDRGINIIGRSSGIPEMKTILRGVALKEYLTFNTLVAKIIGLT 197
WV L+ I+ + + + I+ SGIPEMKTILRGV LKEYLT VAK++ LT
Sbjct: 164 WVTFPLVLILFSALFCHL---ISPQAVGSGIPEMKTILRGVVLKEYLTMKAFVAKVVALT 220
Query: 198 ATLGSGLPLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLAAACAVGVGSCFG 257
A LGSG+P+GKEGPFVHIASI A +LSK ++ F G+YE S++L CAVGVG CFG
Sbjct: 221 AGLGSGIPVGKEGPFVHIASICAAVLSKFMSVFCGVYEQPYYYSDILTVGCAVGVGCCFG 280
Query: 258 APIGAT 263
P+G
Sbjct: 281 TPLGGV 286
>sp|Q64347|CLCN1_MOUSE Chloride channel protein 1 OS=Mus musculus GN=Clcn1 PE=1 SV=3
Length = 994
Score = 137 bits (345), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 85/126 (67%), Gaps = 3/126 (2%)
Query: 138 WVFLALLGIIMATISFFMDRGINIIGRSSGIPEMKTILRGVALKEYLTFNTLVAKIIGLT 197
WV L+ I+ + + + I+ SGIPEMKTILRGV LKEYLT VAK++ LT
Sbjct: 164 WVTFPLILILFSAL---FCQLISPQAVGSGIPEMKTILRGVVLKEYLTLKAFVAKVVALT 220
Query: 198 ATLGSGLPLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLAAACAVGVGSCFG 257
A LGSG+P+GKEGPFVHIASI A +LSK ++ F G+YE +++L CAVGVG CFG
Sbjct: 221 AGLGSGIPVGKEGPFVHIASICAAVLSKFMSMFSGVYEQPYYYTDILTVGCAVGVGCCFG 280
Query: 258 APIGAT 263
P+G
Sbjct: 281 TPLGGV 286
>sp|Q9W701|CLCKB_XENLA Chloride channel protein ClC-Kb OS=Xenopus laevis GN=clcnkb PE=1
SV=1
Length = 689
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 97/178 (54%), Gaps = 45/178 (25%)
Query: 128 KHTFAKLGEDWVFLALLGIIMATISFFMD----------------RGINIIGR------- 164
K+ ++G+DW FL LG+IMA ISF MD G N++ R
Sbjct: 41 KNFLFRIGDDWYFLFALGVIMALISFTMDFTVSKMLNAHRWLQQELGGNVLLRYLSWIVY 100
Query: 165 --------------------SSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATL--GS 202
SGIPE+KTIL GV L+EYLT AK++GLT TL GS
Sbjct: 101 PIALVAFSTGFAQSITPHSGGSGIPELKTILSGVILEEYLTIKNFGAKVVGLTCTLSAGS 160
Query: 203 GLPLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPI 260
+ LGK GPFVH++S++A L ++ TS G YEN+S+ EML AA AVGV + FGAPI
Sbjct: 161 TMFLGKVGPFVHLSSMIAAYLGRMRTSVAGDYENKSKEHEMLVAAAAVGVSTVFGAPI 218
>sp|P21564|CICH_TORMA Chloride channel protein OS=Torpedo marmorata PE=1 SV=1
Length = 805
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 99/192 (51%), Gaps = 44/192 (22%)
Query: 116 ATKFAAVFRFVWKHTFAKLGEDWVFLALLGIIMATISFFMD----RGINI---------- 161
+++ AV +++H LGEDW+FL LLG +MA +S+ MD RG+
Sbjct: 30 VSRWRAVKNCLYRHLVKVLGEDWIFLLLLGALMALVSWAMDFIGSRGLRFYKYLFALVEG 89
Query: 162 -IGRS----------------------------SGIPEMKTILRGVALKEYLTFNTLVAK 192
IG SGIPE+KTI+RG L EYLT T VAK
Sbjct: 90 NIGLQYLVWVCYPLALILFSSLFCQIVSPQAVGSGIPELKTIIRGAVLHEYLTLRTFVAK 149
Query: 193 IIGLTATLGSGLPLGKEGPFVHIASIVATLLSKLVTSFQGIYENESR-NSEMLAAACAVG 251
+GLT L +G PLGKEGPFVHIASI ATLL++L+ G E +++L CA+G
Sbjct: 150 TVGLTVALSAGFPLGKEGPFVHIASICATLLNQLLCFISGRREEPYYLRADILTVGCALG 209
Query: 252 VGSCFGAPIGAT 263
+ CFG P+
Sbjct: 210 ISCCFGTPLAGV 221
>sp|P35522|CICH_TORCA Chloride channel protein OS=Torpedo californica PE=1 SV=3
Length = 810
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 97/192 (50%), Gaps = 44/192 (22%)
Query: 116 ATKFAAVFRFVWKHTFAKLGEDWVFLALLGIIMATISFFMD----RGINII--------- 162
+++ AV +++H LGEDW+FL LLG +MA +S+ MD RG+
Sbjct: 30 VSRWRAVKNCLYRHLVKVLGEDWIFLLLLGALMALVSWAMDFIGSRGLRFYKYLFAMVEG 89
Query: 163 ------------------------------GRSSGIPEMKTILRGVALKEYLTFNTLVAK 192
SGIPE+KTI+RG L EYLT T VAK
Sbjct: 90 NLGLQYLVWVCYPLILILFSSLFCQIVSPQAVGSGIPELKTIIRGAVLHEYLTLRTFVAK 149
Query: 193 IIGLTATLGSGLPLGKEGPFVHIASIVATLLSKLVTSFQGIYENESR-NSEMLAAACAVG 251
+GLT L +G PLGKEGPFVHIASI ATLL++L+ G E +++L CA+G
Sbjct: 150 TVGLTVALSAGFPLGKEGPFVHIASICATLLNQLLCFISGRREEPYYLRADILTVGCALG 209
Query: 252 VGSCFGAPIGAT 263
+ CFG P+
Sbjct: 210 ISCCFGTPLAGV 221
>sp|P51804|CLCKB_RABIT Chloride channel protein ClC-Kb OS=Oryctolagus cuniculus GN=CLCNKB
PE=2 SV=1
Length = 678
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 88/177 (49%), Gaps = 45/177 (25%)
Query: 128 KHTFAKLGEDWVFLALLGIIMATISFFMDRGINIIGRS---------------------- 165
K ++GEDW FL LG++MA IS+ M+ + + R+
Sbjct: 40 KQKLFRVGEDWYFLMTLGVLMALISYAMNFALGRVVRAHKWLYREIGDSHLLRYLSWTVY 99
Query: 166 ---------------------SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATL--GS 202
SGIPE+KTIL GV L+ YL AK++GL+ TL GS
Sbjct: 100 PVALVSFSSGFSQSITPFSGGSGIPELKTILSGVVLENYLDIKNFGAKVVGLSCTLATGS 159
Query: 203 GLPLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLAAACAVGVGSCFGAP 259
L LGK GPFVH++ ++A L ++ T G EN+S+ +EML A AVGV + F AP
Sbjct: 160 TLFLGKVGPFVHLSVMIAAYLGRVRTKTIGEAENKSKQNEMLVAGAAVGVATVFAAP 216
>sp|P51803|CLCKA_RABIT Chloride channel protein ClC-Ka OS=Oryctolagus cuniculus GN=CLCNKA
PE=2 SV=1
Length = 687
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 88/177 (49%), Gaps = 45/177 (25%)
Query: 128 KHTFAKLGEDWVFLALLGIIMATISFFMDRGINIIGRS---------------------- 165
K ++GEDW FL LG++MA IS+ M+ + + R+
Sbjct: 40 KQKLFRVGEDWYFLMTLGVLMALISYAMNFALGRVVRAHKWLYREIGDSHLLRYLSWTVY 99
Query: 166 ---------------------SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATL--GS 202
SGIPE+KTIL GV L+ YL AK++GL+ TL GS
Sbjct: 100 PVALVSFSSGFSQSITPFSGGSGIPELKTILSGVVLENYLDIKNFGAKVVGLSCTLATGS 159
Query: 203 GLPLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLAAACAVGVGSCFGAP 259
L LGK GPFVH++ ++A L ++ T G EN+S+ +EML A AVGV + F AP
Sbjct: 160 TLFLGKVGPFVHLSVMIAAYLGRVRTKTIGEAENKSKQNEMLVAGAAVGVATVFAAP 216
>sp|Q54C67|CLCF_DICDI Chloride channel protein F OS=Dictyostelium discoideum GN=clcF PE=3
SV=1
Length = 809
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 91/149 (61%), Gaps = 12/149 (8%)
Query: 122 VFRFV---WKHTFAKLGEDWVFLALLGII-----MATISFFMDRGINIIGRSSGIPEMKT 173
+F++V W+ F L E++ FL L I +AT S F+ + I SGIP++K+
Sbjct: 89 IFKYVVFSWREAFMSLTENY-FLQYLSFIAWTVALATGSCFIIKKICPAAVGSGIPDLKS 147
Query: 174 ILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEGPFVHIASIVA-TLLSKLVTSFQG 232
I G + L+ K IGL + GSGL +GKEGP++HI++ +A TLLS + F+
Sbjct: 148 IFSGFWNPFVVAPMVLLWKTIGLLLSYGSGLSIGKEGPYIHISATLANTLLS--IKPFKS 205
Query: 233 IYENESRNSEMLAAACAVGVGSCFGAPIG 261
I +N+++ S++LAA CA+GV + FG+PIG
Sbjct: 206 IAQNDTQRSQLLAACCALGVAATFGSPIG 234
>sp|P51800|CLCKA_HUMAN Chloride channel protein ClC-Ka OS=Homo sapiens GN=CLCNKA PE=1 SV=1
Length = 687
Score = 87.8 bits (216), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 81/162 (50%), Gaps = 45/162 (27%)
Query: 128 KHTFAKLGEDWVFLALLGIIMATISFFMDRGINIIGRS---------------------- 165
K +LGEDW FL LG++MA +S+ M+ I + R+
Sbjct: 40 KQKVFRLGEDWYFLMTLGVLMALVSYAMNFAIGCVVRAHQWLYREIGDSHLLRYLSWTVY 99
Query: 166 ---------------------SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATL--GS 202
SGIPE+KT+L GV L++YL AK++GL+ TL GS
Sbjct: 100 PVALVSFSSGFSQSITPSSGGSGIPELKTMLAGVILEDYLDIKNFGAKVVGLSCTLATGS 159
Query: 203 GLPLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEML 244
L LGK GPFVH++ ++A L ++ T+ G EN+S+ +EML
Sbjct: 160 TLFLGKVGPFVHLSVMIAAYLGRVRTTTIGEPENKSKQNEML 201
>sp|P51801|CLCKB_HUMAN Chloride channel protein ClC-Kb OS=Homo sapiens GN=CLCNKB PE=1 SV=3
Length = 687
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 80/162 (49%), Gaps = 45/162 (27%)
Query: 128 KHTFAKLGEDWVFLALLGIIMATISFFMDRGINIIGRS---------------------- 165
K +LGEDW FL LG++MA +S MD + + R+
Sbjct: 40 KQKLFRLGEDWYFLMTLGVLMALVSCAMDLAVESVVRAHQWLYREIGDSHLLRYLSWTVY 99
Query: 166 ---------------------SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATL--GS 202
SGIPE+KT+L GV L++YL AK++GL+ TL GS
Sbjct: 100 PVALVSFSSGFSQSITPSSGGSGIPEVKTMLAGVVLEDYLDIKNFGAKVVGLSCTLACGS 159
Query: 203 GLPLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEML 244
L LGK GPFVH++ ++A L ++ T+ G EN+S+ +EML
Sbjct: 160 TLFLGKVGPFVHLSVMMAAYLGRVRTTTIGEPENKSKQNEML 201
>sp|Q54LQ4|CLCE_DICDI Chloride channel protein E OS=Dictyostelium discoideum GN=clcE PE=3
SV=1
Length = 994
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 8/124 (6%)
Query: 139 VFLALLGIIMATISFFMDRGINIIGRSSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTA 198
VF AL+ + ISF + SGIPEMK+I+ G+ L L F TLV+KI+G+
Sbjct: 234 VFFALISV--CCISFISPYAV-----GSGIPEMKSIMSGINLSRVLGFKTLVSKIVGMVC 286
Query: 199 TLGSGLPLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLAAACAVGVGSCFGA 258
+GL +G+ GPF+H ++I++ +L L F I +N+ +ML A GV + FGA
Sbjct: 287 ASAAGLTIGRTGPFMHASAIISQMLMNL-KVFGAIKKNQIVRYQMLICALTSGVVANFGA 345
Query: 259 PIGA 262
PIG
Sbjct: 346 PIGG 349
>sp|P51802|CLCKB_RAT Chloride channel protein ClC-Kb OS=Rattus norvegicus GN=Clcnkb PE=1
SV=1
Length = 687
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 90/178 (50%), Gaps = 45/178 (25%)
Query: 128 KHTFAKLGEDWVFLALLGIIMATISFFMDRGINIIGRS---------------------- 165
K ++GEDW FL LG++MA IS+ M+ I + R+
Sbjct: 40 KERLFRVGEDWYFLVALGVLMALISYAMNFAIGRVVRAHKWLYREIGDGHLLRYLSWTVY 99
Query: 166 ---------------------SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATL--GS 202
SGIPE+KTIL GV L++YL AK++GL+ TL GS
Sbjct: 100 PVALLSFSSGFSQSITPSSGGSGIPEVKTILTGVILEDYLDIKNFGAKVVGLSCTLATGS 159
Query: 203 GLPLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPI 260
+ LGK GPFVH++ ++A L ++ T G EN+++ E+LAA AVGV + F API
Sbjct: 160 TIFLGKLGPFVHLSVMIAAYLGRVRTKTVGEPENKTKEMELLAAGAAVGVATVFAAPI 217
>sp|Q75JF3|CLCC_DICDI Chloride channel protein C OS=Dictyostelium discoideum GN=clcC PE=3
SV=1
Length = 757
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 73/141 (51%), Gaps = 17/141 (12%)
Query: 130 TFAKLGEDWVFLALLGIIMATISFFMDRGINIIGRSSGIPEMKTILRGVALKEYLTFNTL 189
TF + +VFL+ L +I+A + SSGIPE+K IL GV ++E L F L
Sbjct: 143 TFLGINLLFVFLSCLMVIVA----------GPLASSSGIPEVKGILNGVKVREALGFRAL 192
Query: 190 VAKIIGLTATLGSGLPLGKEGPFVHIASIVATLLSKLVTSFQGI-------YENESRNSE 242
+ KI+ L + SGL +G EGP +HI S V +S+ +S G Y N+ +
Sbjct: 193 LGKIVSLVLSFSSGLFVGPEGPMIHIGSAVGAAISQFKSSTMGFYPSLFLSYRNDRDKRD 252
Query: 243 MLAAACAVGVGSCFGAPIGAT 263
++ A G+ + FGAPIG
Sbjct: 253 FISIGAATGLAAAFGAPIGGV 273
>sp|Q9WUB6|CLCKB_MOUSE Chloride channel protein ClC-Kb OS=Mus musculus GN=Clcnkb PE=1 SV=2
Length = 687
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 90/178 (50%), Gaps = 45/178 (25%)
Query: 128 KHTFAKLGEDWVFLALLGIIMATISFFMDRGINIIGRS---------------------- 165
K ++GEDW FL LG++MA IS+ M+ I + R+
Sbjct: 40 KERLFRVGEDWYFLVALGVLMALISYAMNFTIGRVVRAHKWLYREIGDGHLLRYLSWTVY 99
Query: 166 ---------------------SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATL--GS 202
SGIPE+KTIL GV L++YL AK++GL+ TL GS
Sbjct: 100 PVALLSFSSGFSQSITPSSGGSGIPEVKTILTGVVLEDYLDIKNFGAKVVGLSCTLATGS 159
Query: 203 GLPLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPI 260
+ LGK GPFVH++ ++A L ++ T G E++++ E+LAA AVGV + F API
Sbjct: 160 TIFLGKLGPFVHLSVMIAAYLGRVRTKTVGEPESKTKEMELLAAGAAVGVATVFAAPI 217
>sp|Q06393|CLCKA_RAT Chloride channel protein ClC-Ka OS=Rattus norvegicus GN=Clcnka PE=1
SV=3
Length = 687
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 45/163 (27%)
Query: 128 KHTFAKLGEDWVFLALLGIIMATISFFMDRGINIIGRS---------------------- 165
K ++GEDW FL LG++MA IS+ M+ I + R+
Sbjct: 40 KERLFRVGEDWHFLVALGVLMALISYAMNFAIGRVVRAHKWLYREVGDGHLLRYLSWTVY 99
Query: 166 ---------------------SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATL--GS 202
SG+PE+KT+L GV L++YL AK++GL+ TL GS
Sbjct: 100 PVALLSFSSGFSQSISPFSGGSGLPELKTMLSGVVLEDYLDIKNFGAKVVGLSCTLATGS 159
Query: 203 GLPLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLA 245
+ LGK GPFVH++ +++ L ++ G EN+++ EML+
Sbjct: 160 TIFLGKVGPFVHLSVMISAYLGRVRAKTIGETENKAKEIEMLS 202
>sp|Q99P66|CLCN5_CAVPO H(+)/Cl(-) exchange transporter 5 OS=Cavia porcellus GN=CLCN5 PE=2
SV=1
Length = 746
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 166 SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEGPFVHIASIVATLLSK 225
SGIPE+KTIL G ++ YL TL+ K I L + SGL LGKEGP VH+A +L
Sbjct: 168 SGIPEIKTILSGFIIRGYLGKWTLIIKTITLVLAVSSGLSLGKEGPLVHVACCCGNILCH 227
Query: 226 LVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPIGAT 263
++ ENE++ E+L+AA A GV FGAPIG
Sbjct: 228 CFNKYR---ENEAKRREVLSAAAAAGVSVAFGAPIGGV 262
>sp|Q5RBK4|CLCN5_PONAB H(+)/Cl(-) exchange transporter 5 OS=Pongo abelii GN=CLCN5 PE=2
SV=1
Length = 746
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 166 SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEGPFVHIASIVATLLSK 225
SGIPE+KTIL G ++ YL TLV K I L + SGL LGKEGP VH+A +L
Sbjct: 168 SGIPEIKTILSGFIIRGYLGKWTLVIKTITLVLAVSSGLSLGKEGPLVHVACCCGNILCH 227
Query: 226 LVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPIGAT 263
++ +NE++ E+L+AA A GV FGAPIG
Sbjct: 228 CFNKYR---KNEAKRREVLSAAAAAGVSVAFGAPIGGV 262
>sp|P51795|CLCN5_HUMAN H(+)/Cl(-) exchange transporter 5 OS=Homo sapiens GN=CLCN5 PE=1
SV=1
Length = 746
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 166 SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEGPFVHIASIVATLLSK 225
SGIPE+KTIL G ++ YL TLV K I L + SGL LGKEGP VH+A +L
Sbjct: 168 SGIPEIKTILSGFIIRGYLGKWTLVIKTITLVLAVSSGLSLGKEGPLVHVACCCGNILCH 227
Query: 226 LVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPIGAT 263
++ +NE++ E+L+AA A GV FGAPIG
Sbjct: 228 CFNKYR---KNEAKRREVLSAAAAAGVSVAFGAPIGGV 262
>sp|P51796|CLCN5_RAT H(+)/Cl(-) exchange transporter 5 OS=Rattus norvegicus GN=Clcn5
PE=2 SV=1
Length = 746
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 166 SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEGPFVHIASIVATLLSK 225
SGIPE+KTIL G ++ YL TLV K I L + SGL LGKEGP VH+A +L
Sbjct: 168 SGIPEIKTILSGFIIRGYLGKWTLVIKTITLVLAVSSGLSLGKEGPLVHVACCCGNILCH 227
Query: 226 LVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPIGAT 263
++ +NE++ E+L+AA A GV FGAPIG
Sbjct: 228 CFNKYR---KNEAKRREVLSAAAAAGVSVAFGAPIGGV 262
>sp|P51794|CLCN4_RAT H(+)/Cl(-) exchange transporter 4 OS=Rattus norvegicus GN=Clcn4
PE=2 SV=1
Length = 747
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 69/127 (54%), Gaps = 3/127 (2%)
Query: 137 DWVFLALLGIIMATISFFMDRGINIIGRSSGIPEMKTILRGVALKEYLTFNTLVAKIIGL 196
+++ L ++ A ++ + R SGIPE+KTIL G ++ YL TL+ K + L
Sbjct: 139 NYLMYILWALLFAFLAVSLVRVFAPYACGSGIPEIKTILSGFIIRGYLGKWTLLIKTVTL 198
Query: 197 TATLGSGLPLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLAAACAVGVGSCF 256
+ SGL LGKEGP VH+A S L + + +NE + E+L+AA A GV F
Sbjct: 199 VLVVSSGLSLGKEGPLVHVACCCGNFFSSLFSKYS---KNEGKRREVLSAAAAAGVSVAF 255
Query: 257 GAPIGAT 263
GAPIG
Sbjct: 256 GAPIGGV 262
>sp|Q61418|CLCN4_MOUSE H(+)/Cl(-) exchange transporter 4 OS=Mus musculus GN=Clcn4 PE=2
SV=2
Length = 747
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 69/127 (54%), Gaps = 3/127 (2%)
Query: 137 DWVFLALLGIIMATISFFMDRGINIIGRSSGIPEMKTILRGVALKEYLTFNTLVAKIIGL 196
+++ L ++ A ++ + R SGIPE+KTIL G ++ YL TL+ K + L
Sbjct: 139 NYLMYILWALLFAFLAVSLVRVFAPYACGSGIPEIKTILSGFIIRGYLGKWTLLIKTVTL 198
Query: 197 TATLGSGLPLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLAAACAVGVGSCF 256
+ SGL LGKEGP VH+A S L + + +NE + E+L+AA A GV F
Sbjct: 199 VLVVSSGLSLGKEGPLVHVACCCGNFFSSLFSKYS---KNEGKRREVLSAAAAAGVSVAF 255
Query: 257 GAPIGAT 263
GAPIG
Sbjct: 256 GAPIGGV 262
>sp|Q9WVD4|CLCN5_MOUSE H(+)/Cl(-) exchange transporter 5 OS=Mus musculus GN=Clcn5 PE=2
SV=1
Length = 746
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 166 SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEGPFVHIASIVATLLSK 225
SGIPE+KTIL G ++ YL TLV K I L + SGL LGKEGP VH+A +L
Sbjct: 168 SGIPEIKTILSGFIIRGYLGKWTLVIKTITLVLAVSSGLSLGKEGPLVHVACCCGNILCH 227
Query: 226 LVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPIGAT 263
++ +NE++ E+L+AA A GV FGAPIG
Sbjct: 228 CFNKYR---KNEAKRREVLSAAAAAGVSVAFGAPIGGV 262
>sp|P51793|CLCN4_HUMAN H(+)/Cl(-) exchange transporter 4 OS=Homo sapiens GN=CLCN4 PE=1
SV=2
Length = 760
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 69/127 (54%), Gaps = 3/127 (2%)
Query: 137 DWVFLALLGIIMATISFFMDRGINIIGRSSGIPEMKTILRGVALKEYLTFNTLVAKIIGL 196
+++ L ++ A ++ + R SGIPE+KTIL G ++ YL TL+ K + L
Sbjct: 152 NYLMYILWALLFAFLAVSLVRVFAPYACGSGIPEIKTILSGFIIRGYLGKWTLLIKTVTL 211
Query: 197 TATLGSGLPLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLAAACAVGVGSCF 256
+ SGL LGKEGP VH+A S L + + +NE + E+L+AA A GV F
Sbjct: 212 VLVVSSGLSLGKEGPLVHVACCCGNFFSSLFSKYS---KNEGKRREVLSAAAAAGVSVAF 268
Query: 257 GAPIGAT 263
GAPIG
Sbjct: 269 GAPIGGV 275
>sp|Q9GKE7|CLCN5_PIG H(+)/Cl(-) exchange transporter 5 OS=Sus scrofa GN=CLCN5 PE=2 SV=1
Length = 746
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 166 SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEGPFVHIASIVATLLSK 225
SGIPE+KTIL G ++ YL TL+ K I L + SGL LGKEGP VH+A +L
Sbjct: 168 SGIPEIKTILSGFIIRGYLGKWTLIIKTITLVLAVSSGLSLGKEGPLVHVACCCGNILCH 227
Query: 226 LVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPIGAT 263
++ +NE++ E+L+AA A GV FGAPIG
Sbjct: 228 CFNKYR---KNEAKRREVLSAAAAAGVSVAFGAPIGGV 262
>sp|Q9WUB7|CLCKA_MOUSE Chloride channel protein ClC-Ka OS=Mus musculus GN=Clcnka PE=1 SV=2
Length = 687
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 45/155 (29%)
Query: 136 EDWVFLALLGIIMATISFFMDRGINIIGRS------------------------------ 165
EDW FL LG++MA IS+ M+ I + R+
Sbjct: 48 EDWYFLVALGVLMALISYAMNFAIGRVVRAHKWLYREVGDGHLLRYLSWTVYPVALLSFS 107
Query: 166 -------------SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATL--GSGLPLGKEG 210
SG+PE+KT+L GV L+ YL AK++GL+ TL GS + LGK G
Sbjct: 108 SGFSQSITPFSGGSGLPELKTMLSGVVLENYLDIKNFGAKVVGLSCTLATGSTIFLGKVG 167
Query: 211 PFVHIASIVATLLSKLVTSFQGIYENESRNSEMLA 245
PFVH++ +++ L ++ G E++++ EML+
Sbjct: 168 PFVHLSVMISAYLGRVRAKAVGDTESKAKEVEMLS 202
>sp|P51791|CLCN3_MOUSE H(+)/Cl(-) exchange transporter 3 OS=Mus musculus GN=Clcn3 PE=1
SV=2
Length = 818
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 166 SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEGPFVHIASIVATLLSK 225
SGIPE+KTIL G ++ YL TL+ K I L + SGL LGKEGP VH+A + S
Sbjct: 239 SGIPEIKTILSGFIIRGYLGKWTLMIKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSY 298
Query: 226 LVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPIGAT 263
L + NE++ E+L+AA A GV FGAPIG
Sbjct: 299 LFPKYS---TNEAKKREVLSAASAAGVSVAFGAPIGGV 333
>sp|P51792|CLCN3_RAT H(+)/Cl(-) exchange transporter 3 OS=Rattus norvegicus GN=Clcn3
PE=2 SV=2
Length = 818
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 166 SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEGPFVHIASIVATLLSK 225
SGIPE+KTIL G ++ YL TL+ K I L + SGL LGKEGP VH+A + S
Sbjct: 239 SGIPEIKTILSGFIIRGYLGKWTLMIKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSY 298
Query: 226 LVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPIGAT 263
L + NE++ E+L+AA A GV FGAPIG
Sbjct: 299 LFPKYS---TNEAKKREVLSAASAAGVSVAFGAPIGGV 333
>sp|O18894|CLCN3_RABIT H(+)/Cl(-) exchange transporter 3 OS=Oryctolagus cuniculus GN=CLCN3
PE=2 SV=3
Length = 818
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 166 SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEGPFVHIASIVATLLSK 225
SGIPE+KTIL G ++ YL TL+ K I L + SGL LGKEGP VH+A + S
Sbjct: 239 SGIPEIKTILSGFIIRGYLGKWTLMIKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSY 298
Query: 226 LVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPIGAT 263
L + NE++ E+L+AA A GV FGAPIG
Sbjct: 299 LFPKYS---TNEAKKREVLSAASAAGVSVAFGAPIGGV 333
>sp|P51790|CLCN3_HUMAN H(+)/Cl(-) exchange transporter 3 OS=Homo sapiens GN=CLCN3 PE=1
SV=2
Length = 818
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 166 SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEGPFVHIASIVATLLSK 225
SGIPE+KTIL G ++ YL TL+ K I L + SGL LGKEGP VH+A + S
Sbjct: 239 SGIPEIKTILSGFIIRGYLGKWTLMIKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSY 298
Query: 226 LVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPIGAT 263
L + NE++ E+L+AA A GV FGAPIG
Sbjct: 299 LFPKYS---TNEAKKREVLSAASAAGVSVAFGAPIGGV 333
>sp|Q9TTU3|CLCN5_RABIT H(+)/Cl(-) exchange transporter 5 OS=Oryctolagus cuniculus GN=CLCN5
PE=2 SV=1
Length = 746
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 166 SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEGPFVHIASIVATLLSK 225
SGIPE+KTIL G ++ YL TLV K I L + SGL LGKEGP VH+A +L
Sbjct: 168 SGIPEIKTILSGFIIRGYLGKWTLVIKTITLVLAVSSGLSLGKEGPLVHVACCCGNILCH 227
Query: 226 LVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPIGAT 263
F +NE++ E+L+AA A GV FGAPIG
Sbjct: 228 ---RFNKYRKNEAKRREVLSAAAAAGVSVAFGAPIGGV 262
>sp|Q9R279|CLCN3_CAVPO H(+)/Cl(-) exchange transporter 3 OS=Cavia porcellus GN=CLCN3 PE=2
SV=1
Length = 760
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 166 SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEGPFVHIASIVATLLSK 225
SGIPE+KTIL G ++ YL TL+ K I L + SGL LGKEGP VH+A + S
Sbjct: 181 SGIPEIKTILSGFIIRGYLGKWTLMIKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSY 240
Query: 226 LVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPIGAT 263
L + NE++ E+L+AA A GV FGAPIG
Sbjct: 241 LFPKYS---TNEAKKREVLSAASAAGVSVAFGAPIGGV 275
>sp|Q5RDJ7|CLCN3_PONAB H(+)/Cl(-) exchange transporter 3 OS=Pongo abelii GN=CLCN3 PE=2
SV=1
Length = 801
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 166 SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEGPFVHIASIVATLLSK 225
SGIPE+KTIL G ++ YL TL+ K + L + SGL LGKEGP VH+A + S
Sbjct: 239 SGIPEIKTILSGFIIRGYLGKWTLMIKTVTLVLAVASGLSLGKEGPLVHVACCCGNIFSY 298
Query: 226 LVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPIGAT 263
L + NE++ E+L+AA A GV FGAPIG
Sbjct: 299 LFPKYS---TNEAKKREVLSAASAAGVSVAFGAPIGGV 333
>sp|P92943|CLCD_ARATH Chloride channel protein CLC-d OS=Arabidopsis thaliana GN=CLC-D
PE=1 SV=2
Length = 792
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 118 KFAAVFRFVWKHTFAKLGEDWVFLALLGIIMATISFFMDRGINIIGRSSGIPEMKTILRG 177
KFA F + K FA ++ L+ +++ S ++ SGIPE+K L G
Sbjct: 105 KFALTFAIIQKSYFA----GFIVYLLINLVLVFSSAYIITQFAPAAAGSGIPEIKGYLNG 160
Query: 178 VALKEYLTFNTLVAKIIGLTATLGSGLPLGKEGPFVHIASIVATLLSK 225
+ + L F TL+ KI G ++G GL LGKEGP VH + +A+LL +
Sbjct: 161 IDIPGTLLFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQ 208
>sp|P0C197|CLCNX_USTMA Probable chloride channel protein UM03490-D OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=UM11084.2 PE=3 SV=1
Length = 1131
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 138 WVFLALLGIIMATISFFMDRGINIIGRSSGIPEMKTILRGVALKEYLTFNTLVAKIIGLT 197
W+ L +++ I + + SGI E+K IL G + YL F TL K + L
Sbjct: 308 WIIYMLFAGLLSFICAHLVKSFAPYAAGSGISEIKCILAGFVINGYLGFWTLAIKSLTLP 367
Query: 198 ATLGSGLPLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLAAACAVGVGSCFG 257
+ SGL +GKEGP VH+A + +++ SF ++++ E+L A+ A GV FG
Sbjct: 368 LAIASGLSVGKEGPAVHVACCIGNVVASFFRSFN---RSQAKMRELLTASSAAGVAVAFG 424
Query: 258 APIGAT 263
+PIG
Sbjct: 425 SPIGGV 430
>sp|O60159|YHYB_SCHPO Putative anion/proton exchange transporter C19C7.11
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC19C7.11 PE=3 SV=2
Length = 766
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 127 WKHTFAKLGEDWVFLALLGIIMATISFFMDRGINIIGRSSGIPEMKTILRGVALKEYLTF 186
W + F+ + ALL ++ A I M R + + SGI E+K I+ G +L+F
Sbjct: 139 WTYKFSLNYLIYTAFALLFVLCAAI---MVRDVAPLAAGSGISEIKCIISGFLRDSFLSF 195
Query: 187 NTLVAKIIGLTATLGSGLPLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLAA 246
++ K +GL + SGL +GKEGP VH+A+ + +SK+ F+ E R ++ A
Sbjct: 196 RVMLVKCVGLPLAIASGLSVGKEGPSVHLATTIGHNISKI---FKYAREGSIRYRDICVA 252
Query: 247 ACAVGVGSCFGAPIGAT 263
+ A GV FG+PIG
Sbjct: 253 SAASGVAVAFGSPIGGV 269
>sp|P92941|CLCA_ARATH Chloride channel protein CLC-a OS=Arabidopsis thaliana GN=CLC-A
PE=1 SV=2
Length = 775
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 167 GIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEGPFVHIASIVATLLS-- 224
GIPE+K L G+ F T++ KI+G + +GL LGKEGP VHI S +A+LL
Sbjct: 161 GIPEIKAYLNGIDTPNMFGFTTMMVKIVGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQG 220
Query: 225 -----KLVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPIGAT 263
++ + + N+ +++ A GV + F +P+G
Sbjct: 221 GPDNHRIKWRWLRYFNNDRDRRDLITCGSASGVCAAFRSPVGGV 264
>sp|P92942|CLCB_ARATH Chloride channel protein CLC-b OS=Arabidopsis thaliana GN=CLC-B
PE=1 SV=1
Length = 780
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 167 GIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEGPFVHIASIVATLLSKL 226
GIPE+K L GV T++ KI+G + +GL LGKEGP VHI S +A+LL +
Sbjct: 160 GIPEIKAYLNGVDTPNMFGATTMIVKIVGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQG 219
Query: 227 VTSFQGI-------YENESRNSEMLAAACAVGVGSCFGAPIGAT 263
T I + N+ +++ A GV + F +P+G
Sbjct: 220 GTDNHRIKWRWLRYFNNDRDRRDLITCGSAAGVCAAFRSPVGGV 263
>sp|P60300|CLCG_ARATH Putative chloride channel-like protein CLC-g OS=Arabidopsis
thaliana GN=CBSCLC6 PE=2 SV=2
Length = 765
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 SGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEGPFVHIASIVATLLS- 224
SGIPE+K L GV E + TL+ KIIG + + + L +GK GP VH + VA++L
Sbjct: 144 SGIPEVKAYLNGVDAPEIFSLRTLIIKIIGNISAVSASLLIGKAGPMVHTGACVASILGQ 203
Query: 225 ------KLVTSFQGIYENESRNSEMLAAACAVGVGSCFGAPIGAT 263
+L + ++N+ +++ A G+ + F AP+G
Sbjct: 204 GGSKRYRLTWRWLRFFKNDRDRRDLVTCGAAAGIAASFRAPVGGV 248
>sp|P37020|GEF1_YEAST Anion/proton exchange transporter GEF1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GEF1 PE=1 SV=2
Length = 779
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 138 WVFLALLGIIMATISFFMDRGINIIGRSSGIPEMKTILRGVAL-KEYLTFNTLVAKIIGL 196
++ LL ++ A IS + + + + SGI E+K + G KE+L F TLV K + L
Sbjct: 158 FIIFMLLSVLFALISTLLVKYVAPMATGSGISEIKVWVSGFEYNKEFLGFLTLVIKSVAL 217
Query: 197 TATLGSGLPLGKEGPFVHIASIVATLLSKLVTSFQGIYENESRNSEMLAAACAVGVGSCF 256
+ SGL +GKEGP VH A+ LL+K + Y S E + AA GV F
Sbjct: 218 PLAISSGLSVGKEGPSVHYATCCGYLLTKWLLRDTLTY---SSQYEYITAASGAGVAVAF 274
Query: 257 GAPIGAT 263
GAPIG
Sbjct: 275 GAPIGGV 281
>sp|O94287|YOO2_SCHPO Uncharacterized chloride channel protein C887.02
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC887.02 PE=3 SV=2
Length = 696
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 79/145 (54%), Gaps = 17/145 (11%)
Query: 125 FVWKHTFAKLGEDWVFLALLGIIMATISF-FMDRGINII----GRSSGIPEMKTILRGVA 179
F W++ + VF++ L + ++ F F+ + + R+SGIP +K IL G
Sbjct: 94 FFWRNNHS------VFVSCLIYVSVSVGFAFIATTLGYVVAPAARASGIPTIKAILSGYK 147
Query: 180 ---LKEYLTFNTLVAKIIGLTATLGSGLPLGKEGPFVHIASIVATLLSKLVTSFQGIYEN 236
+ + + TL +K + + ++ SGL +GKEGPFVHIA+ + L+ ++ S ++
Sbjct: 148 YPDMNVFFSIKTLCSKSLAVCFSVASGLWVGKEGPFVHIATNIIYLVERIAPSLA---DS 204
Query: 237 ESRNSEMLAAACAVGVGSCFGAPIG 261
E ++LAAA A G+ + F AP+G
Sbjct: 205 EIFTRQLLAAAMASGIAASFNAPVG 229
>sp|Q1ZXJ0|CLCD_DICDI Chloride channel protein D OS=Dictyostelium discoideum GN=clcD PE=3
SV=1
Length = 1000
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 7/128 (5%)
Query: 143 LLGIIMATISFFMDRGINIIGRSSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGS 202
LL ++AT S + SGIPE+K L G + L TL K + + + S
Sbjct: 305 LLNTLLATCSSLLAVYYEPTAAGSGIPEVKGYLNGTKIPHTLKMKTLWTKFLSMVLAVSS 364
Query: 203 GLPLGKEGPFVHIASIVATLLSKLVTS-------FQGIYENESRNSEMLAAACAVGVGSC 255
GL G EGP +HI +IV S+ + F + N+ + + + GV +
Sbjct: 365 GLQAGSEGPMIHIGAIVGNGFSQAQSKEFGFKIPFLRSFRNDKDKRDFVTSGAGAGVAAA 424
Query: 256 FGAPIGAT 263
F AP+G T
Sbjct: 425 FSAPLGGT 432
>sp|Q4PKH3|CLCN7_BOVIN H(+)/Cl(-) exchange transporter 7 OS=Bos taurus GN=CLCN7 PE=2 SV=1
Length = 809
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 159 INIIGRSSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEGPFVHIASI 218
I + SGIP++K L GV + + TLV K+ G+ ++ GL +GKEGP +H S+
Sbjct: 201 IEPVAAGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVVGGLAVGKEGPMIHSGSV 260
Query: 219 VATLLSK 225
+A +S+
Sbjct: 261 IAAGISQ 267
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,174,116
Number of Sequences: 539616
Number of extensions: 3939467
Number of successful extensions: 12488
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 12267
Number of HSP's gapped (non-prelim): 190
length of query: 263
length of database: 191,569,459
effective HSP length: 115
effective length of query: 148
effective length of database: 129,513,619
effective search space: 19168015612
effective search space used: 19168015612
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)