Query psy8803
Match_columns 111
No_of_seqs 113 out of 1116
Neff 11.2
Searched_HMMs 46136
Date Fri Aug 16 19:40:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8803.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8803hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0279|consensus 99.9 3.1E-21 6.7E-26 115.5 10.6 100 2-111 80-180 (315)
2 KOG0272|consensus 99.9 1.2E-21 2.6E-26 122.4 6.3 99 1-111 277-375 (459)
3 KOG0271|consensus 99.9 3.8E-21 8.3E-26 119.4 7.8 100 1-111 131-235 (480)
4 KOG0263|consensus 99.8 1.9E-20 4.2E-25 123.7 9.8 99 1-111 551-649 (707)
5 KOG0272|consensus 99.8 1.7E-20 3.8E-25 117.3 8.4 99 1-110 319-417 (459)
6 KOG0266|consensus 99.8 4.1E-19 8.8E-24 115.9 11.6 99 1-111 219-318 (456)
7 KOG0279|consensus 99.8 2.9E-19 6.4E-24 107.1 9.6 96 2-111 167-262 (315)
8 KOG0277|consensus 99.8 6.2E-19 1.3E-23 104.8 9.8 95 2-111 122-221 (311)
9 KOG0286|consensus 99.8 2.1E-18 4.6E-23 104.2 9.5 98 2-111 161-259 (343)
10 KOG0315|consensus 99.8 2.9E-18 6.4E-23 101.8 9.5 93 6-111 60-154 (311)
11 KOG0266|consensus 99.8 4.9E-18 1.1E-22 110.9 10.9 100 1-111 262-364 (456)
12 KOG0647|consensus 99.8 1.6E-18 3.5E-23 105.0 7.7 97 1-111 44-145 (347)
13 PTZ00421 coronin; Provisional 99.8 1.3E-17 2.8E-22 109.5 11.8 104 1-111 142-245 (493)
14 KOG0285|consensus 99.8 3E-18 6.6E-23 106.1 8.2 95 1-111 167-265 (460)
15 PTZ00421 coronin; Provisional 99.8 1.9E-17 4.2E-22 108.7 10.9 99 1-111 92-198 (493)
16 KOG0302|consensus 99.8 9.8E-18 2.1E-22 104.2 8.9 100 1-110 274-377 (440)
17 KOG0295|consensus 99.7 4.7E-17 1E-21 100.7 10.5 97 2-110 309-405 (406)
18 KOG0271|consensus 99.7 7.6E-18 1.6E-22 105.0 7.0 93 1-109 383-479 (480)
19 KOG0286|consensus 99.7 3.4E-17 7.4E-22 99.0 9.4 98 2-110 204-302 (343)
20 KOG0282|consensus 99.7 6.6E-18 1.4E-22 107.3 6.0 98 2-111 232-330 (503)
21 KOG0273|consensus 99.7 2.7E-17 5.9E-22 104.5 8.7 104 1-111 333-440 (524)
22 KOG0313|consensus 99.7 3.4E-17 7.4E-22 101.7 7.7 99 2-111 276-376 (423)
23 KOG0283|consensus 99.7 7E-17 1.5E-21 107.6 9.5 96 2-111 385-481 (712)
24 KOG0263|consensus 99.7 4E-17 8.8E-22 108.3 8.0 99 1-111 509-607 (707)
25 PLN00181 protein SPA1-RELATED; 99.7 2.2E-16 4.7E-21 109.0 11.8 99 1-111 549-648 (793)
26 KOG0273|consensus 99.7 1.9E-16 4.2E-21 100.7 9.9 98 1-111 426-523 (524)
27 KOG0315|consensus 99.7 1.5E-16 3.2E-21 94.7 8.7 100 1-111 14-113 (311)
28 KOG0291|consensus 99.7 1.7E-16 3.8E-21 105.6 9.7 102 1-110 366-507 (893)
29 PTZ00420 coronin; Provisional 99.7 6.1E-16 1.3E-20 102.8 12.2 103 1-111 142-248 (568)
30 KOG0264|consensus 99.7 8.6E-17 1.9E-21 101.3 7.6 102 1-111 194-303 (422)
31 KOG0319|consensus 99.7 2.1E-16 4.6E-21 104.7 9.7 99 1-111 479-577 (775)
32 PTZ00420 coronin; Provisional 99.7 7.6E-16 1.7E-20 102.3 12.4 103 2-111 49-156 (568)
33 KOG0292|consensus 99.7 7.6E-17 1.6E-21 109.0 6.7 98 2-111 26-123 (1202)
34 KOG0269|consensus 99.7 7.9E-17 1.7E-21 107.2 6.5 101 2-111 194-296 (839)
35 KOG0265|consensus 99.7 5.5E-16 1.2E-20 94.1 9.5 99 1-111 63-163 (338)
36 KOG0264|consensus 99.7 6.6E-16 1.4E-20 97.4 8.8 99 2-110 245-346 (422)
37 KOG0276|consensus 99.7 1E-15 2.2E-20 100.5 9.5 99 2-110 72-170 (794)
38 KOG0316|consensus 99.7 1E-15 2.2E-20 90.6 8.6 98 2-111 34-131 (307)
39 KOG0645|consensus 99.7 3.6E-15 7.8E-20 89.6 10.1 93 1-109 77-178 (312)
40 KOG0276|consensus 99.6 3.8E-15 8.3E-20 97.8 10.5 95 2-111 114-215 (794)
41 KOG0295|consensus 99.6 2.4E-15 5.2E-20 93.2 8.9 99 1-111 251-364 (406)
42 KOG0292|consensus 99.6 1.9E-15 4.1E-20 102.5 9.1 97 2-110 68-164 (1202)
43 KOG0285|consensus 99.6 1.2E-15 2.7E-20 94.7 7.5 97 3-111 211-307 (460)
44 KOG0772|consensus 99.6 7E-16 1.5E-20 99.3 6.3 101 2-111 286-394 (641)
45 KOG0284|consensus 99.6 9E-16 1.9E-20 96.3 6.7 95 1-111 196-294 (464)
46 KOG0269|consensus 99.6 9.4E-16 2E-20 102.2 7.0 93 2-110 151-249 (839)
47 KOG0275|consensus 99.6 3E-16 6.6E-21 96.7 3.9 99 1-111 279-378 (508)
48 KOG0284|consensus 99.6 6.9E-16 1.5E-20 96.8 5.4 95 1-110 238-336 (464)
49 KOG0277|consensus 99.6 1.1E-15 2.4E-20 91.2 5.9 100 1-111 164-265 (311)
50 KOG0281|consensus 99.6 1.5E-15 3.2E-20 94.3 6.5 90 2-111 212-305 (499)
51 KOG0645|consensus 99.6 1.3E-14 2.9E-19 87.1 10.3 104 1-111 166-311 (312)
52 KOG0281|consensus 99.6 6.5E-16 1.4E-20 95.8 4.5 90 2-111 335-428 (499)
53 KOG0310|consensus 99.6 9.9E-15 2.1E-19 93.1 9.8 95 2-110 128-224 (487)
54 KOG0319|consensus 99.6 4.2E-15 9.2E-20 98.7 8.4 93 1-109 521-617 (775)
55 KOG0282|consensus 99.6 6.5E-15 1.4E-19 93.9 7.6 97 2-111 275-372 (503)
56 KOG0278|consensus 99.6 2E-14 4.4E-19 85.9 8.8 96 2-110 160-296 (334)
57 KOG0294|consensus 99.6 2E-14 4.3E-19 88.0 8.6 98 1-110 57-156 (362)
58 KOG0300|consensus 99.6 1.5E-14 3.2E-19 89.1 7.0 98 2-111 289-386 (481)
59 KOG1034|consensus 99.6 2.6E-14 5.6E-19 87.9 7.9 101 2-111 110-211 (385)
60 KOG0291|consensus 99.6 3E-14 6.5E-19 95.2 8.8 95 5-111 328-422 (893)
61 KOG1446|consensus 99.6 6.9E-14 1.5E-18 85.3 9.5 96 2-111 75-170 (311)
62 KOG0313|consensus 99.6 4.6E-14 1E-18 88.1 8.6 92 1-109 316-416 (423)
63 KOG0283|consensus 99.6 1.3E-14 2.8E-19 97.0 6.5 80 18-110 360-439 (712)
64 KOG1407|consensus 99.5 3.9E-14 8.3E-19 84.9 7.6 94 5-110 167-260 (313)
65 KOG1332|consensus 99.5 5.6E-14 1.2E-18 83.6 8.1 100 1-110 27-133 (299)
66 KOG0318|consensus 99.5 1.8E-13 4E-18 88.4 11.1 102 1-111 164-265 (603)
67 KOG0310|consensus 99.5 3.9E-14 8.4E-19 90.4 7.5 99 2-111 85-184 (487)
68 KOG0305|consensus 99.5 2.1E-13 4.6E-18 88.7 10.6 102 1-110 317-460 (484)
69 KOG0316|consensus 99.5 1.5E-13 3.3E-18 81.6 9.0 93 1-111 75-173 (307)
70 KOG0265|consensus 99.5 7.5E-14 1.6E-18 84.9 7.8 98 1-111 149-246 (338)
71 KOG2110|consensus 99.5 6.8E-13 1.5E-17 82.6 12.1 99 3-111 149-248 (391)
72 KOG0302|consensus 99.5 7E-14 1.5E-18 87.3 7.4 90 6-111 233-332 (440)
73 KOG0268|consensus 99.5 1.1E-13 2.4E-18 86.2 7.6 102 1-111 83-218 (433)
74 cd00200 WD40 WD40 domain, foun 99.5 9E-13 2E-17 79.7 11.2 97 3-111 111-207 (289)
75 KOG0274|consensus 99.5 2.8E-13 6E-18 89.9 9.5 90 3-111 307-400 (537)
76 KOG1407|consensus 99.5 3.9E-13 8.4E-18 80.7 9.1 105 1-110 205-310 (313)
77 KOG4283|consensus 99.5 3.8E-13 8.3E-18 82.1 9.0 94 2-111 119-219 (397)
78 KOG0293|consensus 99.5 5.3E-14 1.1E-18 88.9 5.3 97 3-110 413-512 (519)
79 KOG0289|consensus 99.5 4.8E-13 1E-17 84.9 9.4 88 2-92 364-451 (506)
80 KOG0289|consensus 99.5 6.1E-13 1.3E-17 84.4 9.8 98 2-111 320-419 (506)
81 KOG1036|consensus 99.5 2.5E-13 5.4E-18 82.8 7.6 92 2-111 30-124 (323)
82 KOG1539|consensus 99.5 2.7E-13 5.8E-18 91.4 8.4 96 2-109 551-646 (910)
83 KOG1445|consensus 99.5 8.9E-14 1.9E-18 92.1 6.1 102 1-109 694-796 (1012)
84 KOG0274|consensus 99.5 7.1E-13 1.5E-17 88.0 10.3 92 2-111 223-319 (537)
85 cd00200 WD40 WD40 domain, foun 99.5 1.2E-12 2.7E-17 79.1 10.7 98 2-111 68-165 (289)
86 KOG0290|consensus 99.5 8.4E-13 1.8E-17 80.4 9.2 103 2-111 168-318 (364)
87 PLN00181 protein SPA1-RELATED; 99.5 8E-13 1.7E-17 91.6 10.4 97 1-111 592-690 (793)
88 KOG0293|consensus 99.5 3.1E-13 6.7E-18 85.5 7.5 98 1-110 240-341 (519)
89 KOG0303|consensus 99.5 4.8E-13 1E-17 84.2 7.6 98 1-111 98-203 (472)
90 KOG0267|consensus 99.5 1.3E-13 2.7E-18 91.9 5.2 98 1-111 86-184 (825)
91 KOG0643|consensus 99.5 3.1E-12 6.8E-17 77.1 10.6 101 3-111 28-128 (327)
92 KOG0321|consensus 99.5 2.7E-13 5.9E-18 89.3 6.6 103 2-111 117-248 (720)
93 KOG1273|consensus 99.4 7.9E-13 1.7E-17 81.3 7.9 61 1-61 39-99 (405)
94 KOG0303|consensus 99.4 1.4E-12 3E-17 82.1 9.1 101 1-110 148-248 (472)
95 KOG2111|consensus 99.4 3.7E-12 8.1E-17 78.2 10.4 97 5-111 157-256 (346)
96 KOG0305|consensus 99.4 5E-13 1.1E-17 87.0 6.9 97 2-111 275-376 (484)
97 KOG0772|consensus 99.4 5.6E-13 1.2E-17 86.3 7.0 105 1-109 333-443 (641)
98 KOG0318|consensus 99.4 2.6E-12 5.7E-17 83.2 10.0 95 1-111 459-560 (603)
99 KOG0267|consensus 99.4 3.5E-13 7.6E-18 89.9 5.8 95 1-111 128-226 (825)
100 KOG0306|consensus 99.4 1.1E-12 2.3E-17 88.0 8.0 97 1-109 524-620 (888)
101 KOG0296|consensus 99.4 5.2E-12 1.1E-16 78.7 10.2 97 1-110 80-177 (399)
102 KOG0270|consensus 99.4 4.1E-12 8.9E-17 80.7 9.9 100 1-111 260-360 (463)
103 KOG0275|consensus 99.4 1.3E-13 2.9E-18 85.2 3.1 99 1-110 229-335 (508)
104 KOG4283|consensus 99.4 1.4E-12 3E-17 79.7 7.4 103 1-111 162-276 (397)
105 KOG2445|consensus 99.4 1.4E-11 3E-16 75.6 11.0 103 1-110 29-143 (361)
106 KOG1274|consensus 99.4 6.2E-12 1.3E-16 85.7 9.9 103 1-111 112-262 (933)
107 KOG0973|consensus 99.4 4.5E-12 9.7E-17 87.2 9.3 98 1-110 85-200 (942)
108 KOG2394|consensus 99.4 1.3E-12 2.9E-17 84.8 6.4 75 2-76 307-385 (636)
109 KOG0306|consensus 99.4 2.6E-12 5.7E-17 86.2 7.8 94 2-111 82-179 (888)
110 PF08662 eIF2A: Eukaryotic tra 99.4 2.9E-11 6.4E-16 71.3 11.2 97 4-111 80-179 (194)
111 KOG0308|consensus 99.4 8E-12 1.7E-16 82.7 9.6 94 2-111 188-285 (735)
112 KOG0641|consensus 99.4 1.4E-11 3E-16 73.2 9.7 95 1-111 198-303 (350)
113 KOG1539|consensus 99.4 1.5E-11 3.1E-16 83.3 10.7 99 2-111 177-275 (910)
114 KOG0640|consensus 99.4 4E-12 8.6E-17 78.3 7.2 100 1-109 188-289 (430)
115 PF00400 WD40: WD domain, G-be 99.4 6.7E-12 1.5E-16 55.4 6.2 39 17-55 1-39 (39)
116 KOG0643|consensus 99.4 4.5E-12 9.8E-17 76.5 7.1 99 3-109 165-315 (327)
117 KOG0288|consensus 99.3 2.1E-11 4.6E-16 77.1 10.0 99 2-110 317-416 (459)
118 TIGR03866 PQQ_ABC_repeats PQQ- 99.3 4.3E-11 9.4E-16 73.8 11.1 97 2-111 6-103 (300)
119 KOG0278|consensus 99.3 2.5E-13 5.3E-18 81.3 1.0 94 1-111 75-173 (334)
120 KOG1188|consensus 99.3 8.3E-12 1.8E-16 77.3 7.7 104 1-111 44-196 (376)
121 KOG0270|consensus 99.3 3.3E-12 7.3E-17 81.1 5.8 100 1-111 196-317 (463)
122 KOG4378|consensus 99.3 9.7E-12 2.1E-16 80.5 7.7 97 2-111 182-280 (673)
123 KOG2096|consensus 99.3 9.4E-12 2E-16 76.9 6.9 84 20-110 79-162 (420)
124 KOG0973|consensus 99.3 2.6E-11 5.6E-16 83.6 9.5 58 1-58 145-202 (942)
125 KOG0296|consensus 99.3 2.5E-11 5.4E-16 75.8 8.5 93 1-111 302-398 (399)
126 KOG0308|consensus 99.3 2.7E-11 5.9E-16 80.3 8.0 95 1-111 134-243 (735)
127 KOG1009|consensus 99.3 4.3E-11 9.2E-16 75.6 8.1 103 1-111 30-153 (434)
128 KOG0299|consensus 99.3 1.7E-11 3.7E-16 78.3 6.3 58 1-58 218-275 (479)
129 KOG0321|consensus 99.3 1.6E-11 3.6E-16 81.1 6.2 101 2-111 69-175 (720)
130 KOG0288|consensus 99.3 6E-11 1.3E-15 75.1 8.3 98 2-109 358-459 (459)
131 KOG1036|consensus 99.2 9.8E-11 2.1E-15 71.7 8.5 91 2-111 70-163 (323)
132 KOG0301|consensus 99.2 2.6E-10 5.6E-15 76.2 10.6 91 2-110 195-287 (745)
133 KOG1007|consensus 99.2 6.7E-11 1.4E-15 72.3 7.0 93 3-110 189-288 (370)
134 KOG0642|consensus 99.2 1.3E-10 2.8E-15 75.9 8.2 93 2-110 311-425 (577)
135 KOG0307|consensus 99.2 8.2E-12 1.8E-16 86.5 2.9 102 1-111 84-192 (1049)
136 KOG0294|consensus 99.2 3.5E-10 7.7E-15 69.7 9.5 95 2-110 102-196 (362)
137 KOG0301|consensus 99.2 1.3E-10 2.8E-15 77.5 8.1 93 2-110 156-248 (745)
138 TIGR03866 PQQ_ABC_repeats PQQ- 99.2 7.5E-10 1.6E-14 68.3 11.0 97 3-111 175-279 (300)
139 KOG0647|consensus 99.2 1.9E-10 4.1E-15 70.5 8.0 91 2-111 89-184 (347)
140 KOG1332|consensus 99.2 7.5E-11 1.6E-15 70.5 6.0 103 1-110 74-192 (299)
141 KOG1310|consensus 99.2 1.5E-10 3.3E-15 76.0 7.8 82 19-110 42-124 (758)
142 KOG1063|consensus 99.2 1.6E-10 3.5E-15 77.1 7.9 87 8-110 553-647 (764)
143 KOG0268|consensus 99.2 6.1E-11 1.3E-15 74.2 5.4 91 3-109 247-343 (433)
144 KOG1272|consensus 99.2 6.8E-11 1.5E-15 76.0 5.6 92 2-108 268-359 (545)
145 KOG1408|consensus 99.2 2.2E-10 4.8E-15 77.3 8.0 97 2-110 613-712 (1080)
146 KOG1445|consensus 99.2 6.1E-11 1.3E-15 79.1 5.3 95 1-111 644-750 (1012)
147 KOG4378|consensus 99.2 2.4E-10 5.2E-15 74.3 7.8 97 2-111 96-195 (673)
148 KOG0640|consensus 99.2 1.9E-10 4.1E-15 71.1 6.9 96 5-110 236-334 (430)
149 KOG0639|consensus 99.2 4.8E-11 1E-15 77.6 4.5 58 2-59 526-583 (705)
150 KOG2048|consensus 99.1 2E-09 4.4E-14 71.8 11.1 100 2-111 85-184 (691)
151 KOG1007|consensus 99.1 2.5E-10 5.5E-15 69.8 6.3 98 3-111 140-245 (370)
152 KOG0641|consensus 99.1 1.8E-09 3.8E-14 64.4 9.5 93 2-110 248-348 (350)
153 KOG0649|consensus 99.1 1.5E-09 3.3E-14 65.2 9.3 60 4-63 133-192 (325)
154 KOG1310|consensus 99.1 4.5E-10 9.7E-15 73.9 7.2 104 1-111 66-178 (758)
155 KOG2919|consensus 99.1 5.6E-10 1.2E-14 69.2 7.1 97 1-111 224-327 (406)
156 KOG0646|consensus 99.1 2E-09 4.4E-14 69.1 9.5 100 2-110 193-306 (476)
157 KOG1538|consensus 99.1 1.5E-09 3.3E-14 73.0 9.2 70 6-75 32-103 (1081)
158 KOG1034|consensus 99.1 3.7E-10 7.9E-15 70.0 5.8 57 2-58 153-212 (385)
159 KOG0300|consensus 99.1 3.2E-10 6.8E-15 70.4 5.3 54 2-55 165-218 (481)
160 KOG0322|consensus 99.1 9.5E-11 2.1E-15 70.8 2.8 56 1-56 267-322 (323)
161 KOG0646|consensus 99.1 7.7E-10 1.7E-14 71.0 6.9 92 5-110 101-205 (476)
162 KOG1273|consensus 99.1 8.3E-10 1.8E-14 68.3 6.8 70 30-111 26-95 (405)
163 KOG0299|consensus 99.1 1.3E-09 2.8E-14 69.9 7.5 97 3-111 160-274 (479)
164 KOG4328|consensus 99.1 3.7E-10 8E-15 72.4 5.0 100 2-111 252-353 (498)
165 KOG2394|consensus 99.0 6.2E-10 1.3E-14 72.8 5.9 79 20-110 283-361 (636)
166 KOG1446|consensus 99.0 4.5E-09 9.8E-14 64.6 9.1 98 2-111 31-130 (311)
167 COG2319 FOG: WD40 repeat [Gene 99.0 1.5E-08 3.3E-13 64.0 11.9 98 3-111 130-229 (466)
168 KOG2919|consensus 99.0 3E-09 6.5E-14 66.1 8.1 57 1-58 127-189 (406)
169 KOG1272|consensus 99.0 3.3E-10 7.1E-15 72.9 3.8 99 1-111 225-323 (545)
170 KOG2096|consensus 99.0 2.6E-09 5.5E-14 66.4 6.7 99 2-110 204-307 (420)
171 KOG0322|consensus 99.0 2.7E-09 5.9E-14 64.6 6.6 96 3-110 223-322 (323)
172 KOG2048|consensus 99.0 1.1E-08 2.3E-13 68.5 9.3 97 1-110 126-232 (691)
173 PF08662 eIF2A: Eukaryotic tra 99.0 2.6E-08 5.7E-13 58.8 10.2 93 7-111 37-133 (194)
174 KOG0280|consensus 98.9 1.4E-08 2.9E-13 62.4 8.7 100 2-111 138-241 (339)
175 KOG4328|consensus 98.9 8.6E-09 1.9E-13 66.3 7.8 99 1-109 339-448 (498)
176 KOG1524|consensus 98.9 1.4E-09 3.1E-14 71.4 4.3 100 2-110 80-215 (737)
177 KOG0650|consensus 98.9 1.9E-08 4.1E-13 66.9 9.1 64 18-86 391-454 (733)
178 KOG0639|consensus 98.9 2.8E-09 6.1E-14 69.6 5.0 94 2-111 482-581 (705)
179 KOG0771|consensus 98.9 5.5E-09 1.2E-13 66.3 6.1 61 1-62 160-220 (398)
180 KOG1274|consensus 98.9 2.7E-08 5.9E-13 68.5 9.5 99 1-111 70-168 (933)
181 KOG0290|consensus 98.9 2.1E-08 4.5E-13 61.7 8.0 93 4-111 118-227 (364)
182 KOG0307|consensus 98.9 3.1E-09 6.6E-14 74.2 4.8 94 7-111 232-327 (1049)
183 KOG0644|consensus 98.9 8E-10 1.7E-14 75.6 1.5 90 2-111 207-300 (1113)
184 KOG2055|consensus 98.9 5.2E-08 1.1E-12 63.0 9.3 55 3-58 362-418 (514)
185 KOG1188|consensus 98.9 1.6E-08 3.4E-13 63.1 6.7 92 5-111 141-242 (376)
186 KOG2055|consensus 98.8 4.7E-08 1E-12 63.2 8.7 94 2-110 320-416 (514)
187 PF02239 Cytochrom_D1: Cytochr 98.8 3.1E-07 6.6E-12 59.3 12.2 95 4-110 13-107 (369)
188 KOG2445|consensus 98.8 4E-08 8.7E-13 60.8 7.7 72 24-109 10-89 (361)
189 KOG0650|consensus 98.8 1.3E-07 2.9E-12 63.0 10.4 53 1-55 416-470 (733)
190 KOG1408|consensus 98.8 6E-08 1.3E-12 66.0 8.9 52 8-59 59-112 (1080)
191 PRK01742 tolB translocation pr 98.8 1.3E-07 2.8E-12 62.0 9.9 92 5-109 182-276 (429)
192 KOG2111|consensus 98.8 2.6E-08 5.6E-13 61.7 6.1 58 1-58 197-257 (346)
193 COG2319 FOG: WD40 repeat [Gene 98.8 2.9E-07 6.2E-12 58.2 10.7 95 5-111 176-271 (466)
194 KOG3914|consensus 98.8 6E-08 1.3E-12 61.5 7.1 89 5-111 130-223 (390)
195 KOG0974|consensus 98.7 1.1E-07 2.4E-12 66.2 8.8 90 3-110 151-245 (967)
196 KOG1063|consensus 98.7 6.4E-08 1.4E-12 65.2 7.2 98 3-110 590-698 (764)
197 KOG0974|consensus 98.7 3.6E-08 7.9E-13 68.5 6.0 95 2-110 192-287 (967)
198 KOG2106|consensus 98.7 6.5E-07 1.4E-11 58.8 10.8 92 1-110 384-476 (626)
199 KOG1524|consensus 98.7 4.4E-07 9.4E-12 60.1 9.4 55 20-74 179-236 (737)
200 KOG1517|consensus 98.7 2.6E-07 5.6E-12 65.2 8.8 102 3-111 1183-1287(1387)
201 KOG3881|consensus 98.6 4.3E-07 9.3E-12 57.7 8.1 98 2-111 221-320 (412)
202 KOG1963|consensus 98.6 5.7E-07 1.2E-11 61.8 9.0 96 1-109 221-320 (792)
203 KOG1587|consensus 98.6 2E-07 4.3E-12 62.7 6.7 97 3-110 416-515 (555)
204 KOG2139|consensus 98.6 1.1E-06 2.5E-11 55.7 9.5 86 3-92 214-299 (445)
205 smart00320 WD40 WD40 repeats. 98.6 4.7E-07 1E-11 38.3 5.7 39 17-55 2-40 (40)
206 KOG2106|consensus 98.6 3E-06 6.5E-11 55.8 11.1 93 5-109 426-519 (626)
207 KOG1523|consensus 98.6 1.1E-06 2.3E-11 54.9 8.6 99 3-110 28-129 (361)
208 KOG4547|consensus 98.6 1.2E-06 2.6E-11 58.0 9.3 96 2-110 119-219 (541)
209 PRK11028 6-phosphogluconolacto 98.6 2.1E-06 4.5E-11 54.4 10.3 98 2-110 7-109 (330)
210 KOG4227|consensus 98.6 8.6E-07 1.9E-11 56.9 8.2 101 2-111 122-225 (609)
211 PF11768 DUF3312: Protein of u 98.5 2.4E-06 5.2E-11 56.9 10.2 72 25-110 257-328 (545)
212 KOG1587|consensus 98.5 2.3E-06 5E-11 57.7 9.9 98 5-111 220-323 (555)
213 KOG1240|consensus 98.5 4.9E-06 1.1E-10 59.7 11.5 58 1-58 1065-1129(1431)
214 KOG1009|consensus 98.5 4.4E-07 9.4E-12 58.0 5.2 85 1-89 81-181 (434)
215 KOG4227|consensus 98.5 3.2E-06 7E-11 54.4 9.0 98 1-111 72-179 (609)
216 KOG1064|consensus 98.5 2.7E-07 5.8E-12 68.1 4.5 85 3-110 2311-2397(2439)
217 KOG0644|consensus 98.5 6.3E-08 1.4E-12 66.7 1.3 77 19-111 182-262 (1113)
218 KOG1517|consensus 98.5 2.3E-06 5E-11 60.7 8.7 102 1-111 1225-1333(1387)
219 KOG2110|consensus 98.4 5.5E-06 1.2E-10 52.6 9.6 93 7-110 106-203 (391)
220 PRK05137 tolB translocation pr 98.4 9.9E-06 2.1E-10 53.4 11.0 80 7-92 182-264 (435)
221 KOG0771|consensus 98.4 1.3E-06 2.7E-11 55.9 6.5 64 31-111 148-215 (398)
222 PRK11028 6-phosphogluconolacto 98.4 6.2E-06 1.3E-10 52.3 9.7 99 4-110 99-204 (330)
223 KOG4497|consensus 98.4 4.8E-06 1E-10 52.5 8.4 84 3-91 67-151 (447)
224 KOG2139|consensus 98.4 7.2E-06 1.6E-10 52.2 9.0 101 1-110 114-225 (445)
225 PRK04922 tolB translocation pr 98.4 9.3E-06 2E-10 53.5 9.5 93 7-110 184-279 (433)
226 PRK01742 tolB translocation pr 98.3 1.4E-05 3E-10 52.7 10.0 89 7-110 228-321 (429)
227 KOG0649|consensus 98.3 5.8E-06 1.3E-10 50.2 7.5 72 28-111 115-186 (325)
228 PRK02889 tolB translocation pr 98.3 1.8E-05 3.8E-10 52.1 10.3 90 7-109 176-268 (427)
229 KOG0280|consensus 98.3 1.5E-06 3.2E-11 53.7 4.8 57 2-58 183-242 (339)
230 KOG2321|consensus 98.3 3.3E-06 7E-11 56.4 6.6 94 1-109 191-300 (703)
231 KOG1963|consensus 98.3 6.7E-06 1.4E-10 56.8 7.9 77 25-111 203-281 (792)
232 KOG2315|consensus 98.3 1.5E-05 3.2E-10 53.0 9.1 92 8-110 295-389 (566)
233 KOG4532|consensus 98.3 1.9E-05 4.2E-10 48.6 8.6 95 3-111 134-233 (344)
234 KOG2321|consensus 98.2 7.3E-06 1.6E-10 54.9 7.2 91 13-111 161-258 (703)
235 KOG1240|consensus 98.2 1.9E-05 4E-10 57.0 9.3 90 12-110 1034-1127(1431)
236 PRK03629 tolB translocation pr 98.2 6.3E-05 1.4E-09 49.7 11.0 93 7-110 179-274 (429)
237 KOG0642|consensus 98.1 7.1E-06 1.5E-10 54.5 5.5 80 22-110 289-373 (577)
238 KOG1523|consensus 98.1 2.5E-05 5.5E-10 49.0 7.6 94 4-109 74-174 (361)
239 KOG1409|consensus 98.1 2.2E-05 4.8E-10 49.7 7.4 79 17-111 187-270 (404)
240 KOG4190|consensus 98.1 5.2E-06 1.1E-10 55.7 4.7 58 2-61 752-816 (1034)
241 KOG1645|consensus 98.1 1.8E-05 3.9E-10 51.0 6.6 91 9-111 175-266 (463)
242 KOG1064|consensus 98.1 2.4E-05 5.3E-10 58.5 7.2 102 2-111 2225-2366(2439)
243 PRK00178 tolB translocation pr 98.0 0.00024 5.3E-09 46.8 11.1 92 8-110 180-274 (430)
244 TIGR02800 propeller_TolB tol-p 98.0 0.00023 4.9E-09 46.6 10.8 93 7-110 170-265 (417)
245 KOG2695|consensus 98.0 3.1E-05 6.8E-10 49.1 5.9 95 5-111 272-376 (425)
246 PRK05137 tolB translocation pr 98.0 0.0002 4.4E-09 47.3 9.7 81 6-92 225-308 (435)
247 KOG1334|consensus 97.9 2.1E-05 4.6E-10 51.7 4.8 103 1-111 158-263 (559)
248 PF00400 WD40: WD domain, G-be 97.9 3.2E-05 7E-10 33.5 4.0 28 74-109 12-39 (39)
249 KOG2315|consensus 97.9 0.00045 9.8E-09 46.3 10.4 89 9-110 253-343 (566)
250 KOG4547|consensus 97.9 0.00031 6.7E-09 47.1 9.2 95 3-111 76-172 (541)
251 KOG4714|consensus 97.9 6E-06 1.3E-10 50.5 1.3 57 2-58 197-255 (319)
252 PRK03629 tolB translocation pr 97.9 0.0004 8.6E-09 46.0 9.7 81 6-92 222-305 (429)
253 PRK04922 tolB translocation pr 97.8 0.00046 1E-08 45.6 9.6 80 7-92 228-310 (433)
254 KOG2695|consensus 97.8 3.9E-05 8.5E-10 48.7 4.1 62 2-63 316-382 (425)
255 KOG4714|consensus 97.8 3.5E-05 7.6E-10 47.2 3.6 86 9-110 161-253 (319)
256 PRK02889 tolB translocation pr 97.8 0.00032 6.8E-09 46.4 8.4 80 7-92 220-302 (427)
257 KOG3881|consensus 97.8 4.8E-05 1E-09 48.8 4.3 61 3-63 265-326 (412)
258 PF02239 Cytochrom_D1: Cytochr 97.8 0.0027 5.8E-08 41.4 12.3 60 3-63 54-114 (369)
259 KOG1354|consensus 97.8 0.0001 2.2E-09 46.9 5.5 78 25-111 162-244 (433)
260 PRK04792 tolB translocation pr 97.8 0.00075 1.6E-08 45.0 9.8 79 8-92 199-280 (448)
261 PLN02919 haloacid dehalogenase 97.7 0.0013 2.9E-08 48.1 11.3 74 30-111 806-888 (1057)
262 KOG0309|consensus 97.7 0.00012 2.6E-09 50.8 5.7 99 2-111 86-188 (1081)
263 KOG1538|consensus 97.7 0.00026 5.5E-09 48.9 6.8 65 29-110 14-82 (1081)
264 COG4946 Uncharacterized protei 97.7 0.0031 6.7E-08 42.2 11.2 99 3-110 377-476 (668)
265 PF11768 DUF3312: Protein of u 97.6 0.00018 3.8E-09 48.4 5.4 55 2-58 276-330 (545)
266 KOG3914|consensus 97.6 0.00011 2.5E-09 47.1 4.1 60 2-62 168-228 (390)
267 TIGR02658 TTQ_MADH_Hv methylam 97.6 0.0051 1.1E-07 39.9 11.3 96 7-111 27-136 (352)
268 PF10282 Lactonase: Lactonase, 97.5 0.0062 1.3E-07 39.3 11.3 98 4-110 211-321 (345)
269 KOG1409|consensus 97.5 0.00024 5.2E-09 45.2 4.7 56 3-58 215-271 (404)
270 KOG4190|consensus 97.5 6.4E-05 1.4E-09 50.7 2.2 40 19-58 727-766 (1034)
271 PF12894 Apc4_WD40: Anaphase-p 97.5 0.00081 1.8E-08 30.6 5.1 31 27-57 11-41 (47)
272 TIGR02800 propeller_TolB tol-p 97.5 0.0037 8.1E-08 40.9 10.0 80 7-92 214-296 (417)
273 PRK01029 tolB translocation pr 97.4 0.0029 6.2E-08 42.0 9.0 81 20-110 319-402 (428)
274 KOG0309|consensus 97.4 0.00018 3.8E-09 50.1 3.4 100 1-110 131-231 (1081)
275 PRK00178 tolB translocation pr 97.4 0.0046 1E-07 40.9 9.6 79 8-92 224-305 (430)
276 PRK04792 tolB translocation pr 97.4 0.005 1.1E-07 41.1 9.8 79 8-92 243-324 (448)
277 KOG4497|consensus 97.3 0.0007 1.5E-08 43.1 5.1 94 5-110 27-121 (447)
278 PRK01029 tolB translocation pr 97.3 0.0054 1.2E-07 40.8 9.2 96 6-110 256-358 (428)
279 KOG1354|consensus 97.3 0.00091 2E-08 42.8 5.2 99 3-110 232-358 (433)
280 KOG4532|consensus 97.2 0.0072 1.6E-07 37.7 8.0 78 26-111 202-282 (344)
281 KOG1334|consensus 97.1 0.00015 3.3E-09 47.9 0.5 57 2-58 411-467 (559)
282 PF08450 SGL: SMP-30/Gluconola 97.1 0.026 5.6E-07 34.5 12.0 91 7-110 60-163 (246)
283 KOG4640|consensus 97.0 0.0036 7.8E-08 42.9 6.3 41 23-63 57-98 (665)
284 KOG1275|consensus 97.0 0.0017 3.7E-08 46.2 4.9 56 3-60 193-257 (1118)
285 COG5170 CDC55 Serine/threonine 97.0 0.003 6.6E-08 40.1 5.3 77 26-111 171-252 (460)
286 PF15492 Nbas_N: Neuroblastoma 96.9 0.0056 1.2E-07 38.1 5.8 37 26-62 228-264 (282)
287 KOG1275|consensus 96.9 0.012 2.7E-07 42.2 7.9 89 11-111 161-254 (1118)
288 COG5170 CDC55 Serine/threonine 96.8 0.0045 9.8E-08 39.4 5.3 100 3-111 189-309 (460)
289 PLN02919 haloacid dehalogenase 96.8 0.029 6.2E-07 41.5 9.8 74 31-111 686-770 (1057)
290 COG2706 3-carboxymuconate cycl 96.7 0.068 1.5E-06 34.5 9.9 72 30-110 147-220 (346)
291 PF10282 Lactonase: Lactonase, 96.7 0.072 1.6E-06 34.4 12.5 99 5-110 60-173 (345)
292 COG5354 Uncharacterized protei 96.7 0.045 9.7E-07 37.0 9.3 95 6-110 297-394 (561)
293 KOG2314|consensus 96.7 0.008 1.7E-07 40.9 6.0 51 7-58 282-335 (698)
294 KOG1832|consensus 96.6 0.0033 7.1E-08 45.1 4.0 69 20-92 1094-1162(1516)
295 KOG1645|consensus 96.6 0.01 2.3E-07 38.8 5.8 55 4-59 213-268 (463)
296 PF10313 DUF2415: Uncharacteri 96.6 0.016 3.4E-07 25.8 4.7 31 28-58 1-34 (43)
297 COG4946 Uncharacterized protei 96.6 0.086 1.9E-06 35.7 9.8 93 6-104 422-518 (668)
298 KOG2079|consensus 96.6 0.0084 1.8E-07 43.6 5.6 61 3-63 105-166 (1206)
299 PF00930 DPPIV_N: Dipeptidyl p 96.5 0.035 7.7E-07 35.9 7.7 86 5-92 21-119 (353)
300 KOG2314|consensus 96.5 0.017 3.8E-07 39.4 6.3 74 31-111 214-290 (698)
301 smart00320 WD40 WD40 repeats. 96.3 0.01 2.2E-07 24.0 3.3 27 75-109 14-40 (40)
302 KOG1832|consensus 96.2 0.0042 9E-08 44.7 2.7 57 2-58 1118-1176(1516)
303 PF10313 DUF2415: Uncharacteri 96.2 0.023 5E-07 25.3 4.1 29 76-111 3-33 (43)
304 KOG1912|consensus 96.1 0.051 1.1E-06 38.8 7.3 62 1-62 83-148 (1062)
305 PF12234 Rav1p_C: RAVE protein 96.0 0.19 4E-06 35.3 9.5 88 5-92 49-147 (631)
306 PRK02888 nitrous-oxide reducta 95.8 0.37 8.1E-06 33.9 10.1 29 76-111 323-351 (635)
307 PF14655 RAB3GAP2_N: Rab3 GTPa 95.7 0.25 5.5E-06 33.0 9.0 42 21-62 301-342 (415)
308 PF04762 IKI3: IKI3 family; I 95.7 0.14 3E-06 37.7 8.3 91 7-109 237-331 (928)
309 KOG0882|consensus 95.7 0.01 2.2E-07 39.5 2.6 58 2-59 25-86 (558)
310 KOG2041|consensus 95.7 0.069 1.5E-06 37.9 6.5 32 27-58 14-45 (1189)
311 KOG1912|consensus 95.7 0.071 1.5E-06 38.1 6.4 52 8-59 36-99 (1062)
312 KOG2041|consensus 95.6 0.044 9.5E-07 38.9 5.3 58 2-59 31-103 (1189)
313 PRK04043 tolB translocation pr 95.6 0.41 8.8E-06 32.1 11.1 80 7-92 213-295 (419)
314 PRK02888 nitrous-oxide reducta 95.4 0.37 8E-06 33.9 9.2 97 6-110 295-403 (635)
315 PF15492 Nbas_N: Neuroblastoma 95.4 0.056 1.2E-06 33.9 4.9 30 29-58 45-74 (282)
316 KOG3617|consensus 95.3 0.07 1.5E-06 38.7 5.4 56 2-57 76-131 (1416)
317 TIGR02658 TTQ_MADH_Hv methylam 95.2 0.27 5.8E-06 32.2 7.7 57 7-64 279-337 (352)
318 KOG2444|consensus 95.2 0.083 1.8E-06 32.3 5.0 61 3-63 76-138 (238)
319 KOG1008|consensus 95.1 0.0051 1.1E-07 42.5 -0.2 102 2-111 75-184 (783)
320 KOG4640|consensus 95.1 0.18 4E-06 35.1 6.9 72 27-111 20-92 (665)
321 PF04053 Coatomer_WDAD: Coatom 95.1 0.34 7.5E-06 32.7 8.1 50 5-57 124-173 (443)
322 COG5354 Uncharacterized protei 95.0 0.42 9E-06 32.6 8.0 89 8-109 256-346 (561)
323 KOG2066|consensus 94.9 0.23 5.1E-06 35.5 7.0 53 1-55 87-144 (846)
324 PF08553 VID27: VID27 cytoplas 94.8 0.055 1.2E-06 38.8 4.1 55 1-56 592-646 (794)
325 KOG3621|consensus 94.8 0.16 3.4E-06 35.8 5.9 89 3-92 51-142 (726)
326 KOG1008|consensus 94.6 0.012 2.6E-07 40.8 0.4 91 5-109 127-223 (783)
327 KOG2066|consensus 94.5 0.46 9.9E-06 34.2 7.6 50 37-92 81-135 (846)
328 PF12894 Apc4_WD40: Anaphase-p 94.2 0.22 4.7E-06 22.6 4.0 28 75-110 13-40 (47)
329 KOG3617|consensus 94.1 0.092 2E-06 38.1 3.9 70 29-110 61-130 (1416)
330 KOG4649|consensus 94.0 0.95 2.1E-05 28.7 8.0 61 2-63 68-129 (354)
331 PF07433 DUF1513: Protein of u 94.0 1 2.2E-05 28.9 10.1 97 6-110 137-246 (305)
332 PF07569 Hira: TUP1-like enhan 93.9 0.84 1.8E-05 27.8 7.3 29 35-63 18-46 (219)
333 KOG2444|consensus 93.8 0.078 1.7E-06 32.4 2.7 57 2-58 119-178 (238)
334 PF12768 Rax2: Cortical protei 93.7 1.1 2.4E-05 28.5 11.1 56 4-59 13-74 (281)
335 TIGR03300 assembly_YfgL outer 93.5 1.4 2.9E-05 28.8 8.4 58 4-63 286-344 (377)
336 PF08553 VID27: VID27 cytoplas 93.2 0.69 1.5E-05 33.6 6.9 84 4-92 549-637 (794)
337 PRK04043 tolB translocation pr 93.2 1.7 3.7E-05 29.2 11.2 72 29-110 189-264 (419)
338 PF04762 IKI3: IKI3 family; I 93.0 2.9 6.2E-05 31.2 9.8 61 27-92 75-139 (928)
339 COG0823 TolB Periplasmic compo 92.8 1.1 2.4E-05 30.2 7.1 77 8-92 219-300 (425)
340 PF07433 DUF1513: Protein of u 92.7 1.8 3.9E-05 27.9 9.1 75 32-111 9-85 (305)
341 PF13360 PQQ_2: PQQ-like domai 92.3 1.5 3.3E-05 26.3 8.2 57 5-62 1-59 (238)
342 KOG2114|consensus 92.3 3.1 6.6E-05 30.6 8.9 80 8-87 93-185 (933)
343 TIGR03300 assembly_YfgL outer 92.3 1.3 2.8E-05 28.9 6.9 55 4-62 248-302 (377)
344 PF14783 BBS2_Mid: Ciliary BBS 92.0 1.2 2.5E-05 24.3 8.0 18 40-57 16-33 (111)
345 COG2706 3-carboxymuconate cycl 92.0 2.3 5.1E-05 27.8 9.3 96 6-110 15-118 (346)
346 KOG2395|consensus 92.0 1.6 3.4E-05 30.4 7.0 85 3-92 400-490 (644)
347 PF04053 Coatomer_WDAD: Coatom 91.9 2.2 4.9E-05 29.0 7.7 47 39-92 117-163 (443)
348 PF11715 Nup160: Nucleoporin N 91.2 1 2.2E-05 31.1 5.8 34 29-62 216-253 (547)
349 KOG1920|consensus 91.1 5.7 0.00012 30.4 10.4 50 6-56 89-138 (1265)
350 KOG2079|consensus 90.9 0.29 6.4E-06 36.3 3.0 63 38-111 98-160 (1206)
351 KOG0882|consensus 90.7 3.5 7.5E-05 28.2 7.5 99 4-111 119-231 (558)
352 KOG2395|consensus 90.4 0.42 9E-06 33.0 3.2 56 1-57 445-500 (644)
353 PF07569 Hira: TUP1-like enhan 90.0 2.1 4.6E-05 26.1 5.8 53 5-58 30-96 (219)
354 PF13360 PQQ_2: PQQ-like domai 89.7 2.6 5.7E-05 25.3 6.2 58 4-63 43-100 (238)
355 COG0823 TolB Periplasmic compo 89.3 4.8 0.0001 27.3 7.5 80 17-108 182-265 (425)
356 PF08450 SGL: SMP-30/Gluconola 89.3 3.5 7.6E-05 25.2 10.6 76 27-110 133-212 (246)
357 PF02897 Peptidase_S9_N: Proly 89.1 4.9 0.00011 26.7 10.3 77 29-110 125-209 (414)
358 PF10168 Nup88: Nuclear pore c 88.8 7.4 0.00016 28.4 9.8 74 29-111 86-179 (717)
359 PF06433 Me-amine-dh_H: Methyl 88.5 4.3 9.3E-05 26.7 6.6 54 9-63 271-326 (342)
360 KOG1920|consensus 87.9 5.2 0.00011 30.6 7.3 97 7-110 222-321 (1265)
361 PF06433 Me-amine-dh_H: Methyl 87.9 5.9 0.00013 26.1 10.2 84 7-92 17-113 (342)
362 PF01731 Arylesterase: Arylest 87.8 1.9 4.1E-05 22.3 4.0 31 74-111 54-84 (86)
363 PF03088 Str_synth: Strictosid 87.3 2.8 6.1E-05 21.8 6.0 43 45-92 33-75 (89)
364 PF00930 DPPIV_N: Dipeptidyl p 87.3 4.3 9.2E-05 26.5 6.3 49 48-110 22-70 (353)
365 PF04841 Vps16_N: Vps16, N-ter 87.3 5.9 0.00013 26.6 7.0 50 8-59 62-111 (410)
366 PF14870 PSII_BNR: Photosynthe 87.3 6 0.00013 25.6 8.7 59 27-90 144-203 (302)
367 KOG1916|consensus 86.7 0.61 1.3E-05 34.4 2.3 53 4-57 202-265 (1283)
368 PF01436 NHL: NHL repeat; Int 86.5 1.4 3E-05 17.4 3.9 25 30-54 4-28 (28)
369 PF07676 PD40: WD40-like Beta 86.4 1.7 3.7E-05 18.3 4.9 29 26-54 7-38 (39)
370 KOG3621|consensus 86.2 2.4 5.3E-05 30.3 4.8 57 2-58 93-155 (726)
371 PF05694 SBP56: 56kDa selenium 85.6 9.3 0.0002 26.2 10.7 100 5-111 220-342 (461)
372 PF08596 Lgl_C: Lethal giant l 85.5 8.8 0.00019 25.8 10.8 44 19-63 78-121 (395)
373 PF00780 CNH: CNH domain; Int 83.2 8.6 0.00019 23.9 6.8 59 37-110 5-63 (275)
374 KOG2114|consensus 82.7 13 0.00028 27.7 7.1 53 4-58 42-101 (933)
375 KOG3630|consensus 82.4 7.6 0.00016 29.9 6.1 56 3-58 174-229 (1405)
376 PF12234 Rav1p_C: RAVE protein 80.5 19 0.00041 26.0 9.5 64 31-108 33-101 (631)
377 KOG2377|consensus 80.2 17 0.00036 25.4 6.6 33 26-58 65-97 (657)
378 COG3391 Uncharacterized conser 80.1 15 0.00032 24.5 11.2 92 6-110 95-189 (381)
379 PF05096 Glu_cyclase_2: Glutam 79.1 14 0.0003 23.5 9.9 55 3-60 106-160 (264)
380 COG5167 VID27 Protein involved 78.6 5.4 0.00012 28.0 4.2 56 1-57 577-632 (776)
381 PF03178 CPSF_A: CPSF A subuni 77.9 16 0.00034 23.5 7.6 93 5-109 105-200 (321)
382 PF07995 GSDH: Glucose / Sorbo 75.4 20 0.00043 23.4 7.4 54 29-84 3-59 (331)
383 TIGR02276 beta_rpt_yvtn 40-res 74.5 5.6 0.00012 16.7 3.4 9 101-109 12-20 (42)
384 PF08596 Lgl_C: Lethal giant l 74.5 24 0.00051 23.9 8.2 87 6-92 234-325 (395)
385 KOG4499|consensus 73.4 7.9 0.00017 24.4 3.6 34 3-36 229-262 (310)
386 PF14783 BBS2_Mid: Ciliary BBS 72.4 14 0.0003 20.2 10.3 53 2-58 20-72 (111)
387 TIGR03606 non_repeat_PQQ dehyd 70.8 32 0.0007 23.8 6.5 59 27-85 29-90 (454)
388 PF10584 Proteasome_A_N: Prote 70.5 0.98 2.1E-05 17.2 -0.4 7 35-41 8-14 (23)
389 COG2133 Glucose/sorbosone dehy 70.5 28 0.0006 23.6 5.8 64 28-91 177-256 (399)
390 KOG4460|consensus 67.9 42 0.00091 24.0 8.4 27 29-55 105-131 (741)
391 PF04841 Vps16_N: Vps16, N-ter 67.2 36 0.00079 23.0 10.9 31 28-58 217-247 (410)
392 PF03178 CPSF_A: CPSF A subuni 66.7 32 0.00068 22.1 9.1 89 7-110 2-114 (321)
393 PRK10115 protease 2; Provision 66.3 49 0.0011 24.2 8.2 59 29-93 128-191 (686)
394 COG3391 Uncharacterized conser 65.8 37 0.00081 22.6 11.3 85 6-92 139-225 (381)
395 PRK13616 lipoprotein LpqB; Pro 65.6 48 0.001 23.8 7.8 63 29-92 398-466 (591)
396 PF05694 SBP56: 56kDa selenium 65.3 43 0.00093 23.2 6.5 65 27-92 311-392 (461)
397 COG3386 Gluconolactonase [Carb 64.9 22 0.00047 23.1 4.5 41 17-57 152-193 (307)
398 KOG2280|consensus 64.6 56 0.0012 24.3 7.1 50 8-59 65-114 (829)
399 PRK11138 outer membrane biogen 62.7 36 0.00077 22.6 5.3 13 6-18 344-356 (394)
400 COG3386 Gluconolactonase [Carb 62.4 18 0.00038 23.5 3.7 29 75-110 164-192 (307)
401 PF10168 Nup88: Nuclear pore c 62.2 32 0.0007 25.3 5.3 34 26-59 145-181 (717)
402 PF14870 PSII_BNR: Photosynthe 62.0 41 0.0009 21.9 9.0 63 26-90 185-249 (302)
403 PF13570 PQQ_3: PQQ-like domai 61.4 12 0.00027 15.7 3.3 21 38-58 20-40 (40)
404 TIGR02608 delta_60_rpt delta-6 61.1 17 0.00037 17.1 3.2 18 29-46 2-19 (55)
405 PF11715 Nup160: Nucleoporin N 60.7 7.5 0.00016 27.0 2.0 20 4-23 237-256 (547)
406 smart00564 PQQ beta-propeller 58.8 12 0.00026 14.7 3.6 21 41-61 8-28 (33)
407 PF14761 HPS3_N: Hermansky-Pud 58.5 41 0.0009 20.8 7.2 63 40-108 29-92 (215)
408 TIGR02604 Piru_Ver_Nterm putat 58.5 51 0.0011 21.8 8.0 18 28-45 14-31 (367)
409 KOG3616|consensus 56.2 45 0.00097 25.2 5.1 33 27-59 14-46 (1636)
410 KOG2109|consensus 54.0 15 0.00033 26.6 2.5 46 11-56 299-345 (788)
411 PF07250 Glyoxal_oxid_N: Glyox 53.7 54 0.0012 20.6 6.0 49 10-58 49-100 (243)
412 KOG4460|consensus 51.0 70 0.0015 23.0 5.2 33 28-60 166-201 (741)
413 KOG1900|consensus 50.7 1E+02 0.0023 24.5 6.3 52 5-57 97-157 (1311)
414 PRK11138 outer membrane biogen 50.5 73 0.0016 21.2 8.4 25 39-63 335-359 (394)
415 PF10214 Rrn6: RNA polymerase 50.5 1E+02 0.0022 22.9 7.7 29 28-56 146-175 (765)
416 PF14727 PHTB1_N: PTHB1 N-term 50.4 81 0.0018 21.7 7.5 54 3-57 151-204 (418)
417 PF07995 GSDH: Glucose / Sorbo 49.8 53 0.0012 21.4 4.5 27 26-52 304-330 (331)
418 TIGR03075 PQQ_enz_alc_DH PQQ-d 48.9 93 0.002 22.0 7.9 57 6-63 440-496 (527)
419 PF12657 TFIIIC_delta: Transcr 48.3 54 0.0012 19.1 4.6 31 28-58 86-122 (173)
420 PF02897 Peptidase_S9_N: Proly 47.4 84 0.0018 21.0 9.8 84 4-92 147-245 (414)
421 PF08801 Nucleoporin_N: Nup133 45.4 50 0.0011 22.3 3.9 31 28-58 190-220 (422)
422 PF06977 SdiA-regulated: SdiA- 45.3 77 0.0017 20.0 9.4 36 22-57 16-52 (248)
423 PF14583 Pectate_lyase22: Olig 43.3 1.1E+02 0.0023 21.0 10.2 73 29-108 284-378 (386)
424 PF06739 SBBP: Beta-propeller 41.0 33 0.00072 14.5 3.4 22 28-49 13-34 (38)
425 PF02870 Methyltransf_1N: 6-O- 40.8 41 0.0009 16.5 2.4 24 35-58 8-31 (77)
426 COG5167 VID27 Protein involved 40.1 1.4E+02 0.0031 21.6 7.6 21 38-58 572-592 (776)
427 COG4590 ABC-type uncharacteriz 39.9 1.4E+02 0.003 21.3 6.9 58 39-110 328-385 (733)
428 PF08728 CRT10: CRT10; InterP 39.7 1.6E+02 0.0035 22.0 7.3 75 27-110 163-245 (717)
429 PF05096 Glu_cyclase_2: Glutam 39.5 1E+02 0.0022 19.8 9.6 85 7-92 149-249 (264)
430 PRK10526 acyl-CoA thioesterase 37.8 72 0.0016 20.4 3.7 26 29-54 260-285 (286)
431 cd03444 Thioesterase_II_repeat 34.4 64 0.0014 17.1 2.6 20 30-49 83-102 (104)
432 PF11635 Med16: Mediator compl 33.5 2.1E+02 0.0045 21.5 6.4 66 27-92 259-339 (753)
433 KOG1983|consensus 33.0 87 0.0019 24.2 3.8 25 36-60 243-267 (993)
434 cd00216 PQQ_DH Dehydrogenases 33.0 1.7E+02 0.0037 20.4 5.7 58 5-62 364-429 (488)
435 PF01011 PQQ: PQQ enzyme repea 33.0 46 0.001 13.8 3.6 20 43-62 4-23 (38)
436 PRK13616 lipoprotein LpqB; Pro 32.5 2E+02 0.0043 20.9 9.1 26 27-53 447-472 (591)
437 COG4880 Secreted protein conta 31.6 1.9E+02 0.0041 20.4 8.0 46 17-62 415-462 (603)
438 PF15525 DUF4652: Domain of un 31.1 1.3E+02 0.0028 18.4 6.6 59 49-110 88-147 (200)
439 KOG4499|consensus 30.7 1.5E+02 0.0033 19.1 7.2 48 33-84 217-264 (310)
440 cd01211 GAPCenA GAPCenA Phosph 30.5 1.1E+02 0.0023 17.3 3.5 21 4-24 48-68 (125)
441 KOG4649|consensus 30.2 1.6E+02 0.0035 19.2 5.9 22 39-60 63-84 (354)
442 PF15390 DUF4613: Domain of un 30.1 2.3E+02 0.0049 20.9 6.9 68 25-92 54-131 (671)
443 PF13983 YsaB: YsaB-like lipop 29.3 52 0.0011 16.3 1.6 12 31-42 61-72 (77)
444 PF00843 Arena_nucleocap: Aren 28.5 27 0.00058 24.1 0.6 12 100-111 149-160 (533)
445 PF06200 tify: tify domain; I 28.5 37 0.00081 14.4 0.9 12 4-15 11-22 (36)
446 PF15390 DUF4613: Domain of un 28.4 2.4E+02 0.0053 20.7 7.7 67 32-109 117-184 (671)
447 COG3490 Uncharacterized protei 28.3 1.8E+02 0.004 19.3 7.7 74 31-111 71-148 (366)
448 PF08728 CRT10: CRT10; InterP 28.0 1E+02 0.0022 22.9 3.4 56 1-56 181-245 (717)
449 PF12566 DUF3748: Protein of u 27.5 72 0.0016 17.7 2.0 22 34-55 74-95 (122)
450 PF14655 RAB3GAP2_N: Rab3 GTPa 27.4 2.1E+02 0.0046 19.8 8.3 22 32-53 6-27 (415)
451 PRK14751 tetracycline resistan 27.1 50 0.0011 12.8 1.0 10 48-57 14-23 (28)
452 TIGR02171 Fb_sc_TIGR02171 Fibr 26.6 1.8E+02 0.0039 22.4 4.4 50 8-58 330-386 (912)
453 PF14781 BBS2_N: Ciliary BBSom 26.6 1.3E+02 0.0029 17.2 8.2 25 34-58 5-29 (136)
454 COG3204 Uncharacterized protei 26.3 2E+02 0.0043 19.0 7.1 37 24-60 82-118 (316)
455 KOG0183|consensus 25.8 44 0.00095 20.7 1.2 9 34-42 10-18 (249)
456 PF08954 DUF1900: Domain of un 24.2 1.5E+02 0.0032 16.9 5.0 32 28-59 11-43 (136)
457 KOG1520|consensus 24.0 1.8E+02 0.0039 19.8 3.7 18 75-92 220-237 (376)
458 KOG2467|consensus 22.9 82 0.0018 21.6 2.0 18 87-111 342-359 (477)
459 PF10395 Utp8: Utp8 family; I 22.0 2.8E+02 0.0061 20.7 4.5 30 27-56 129-158 (670)
460 PF09081 DUF1921: Domain of un 22.0 68 0.0015 14.6 1.1 10 100-109 42-51 (51)
461 TIGR00189 tesB acyl-CoA thioes 21.9 1.4E+02 0.0031 18.7 3.0 23 29-51 248-270 (271)
462 smart00135 LY Low-density lipo 21.8 79 0.0017 12.8 4.0 28 76-110 11-38 (43)
463 KOG3950|consensus 21.0 2.4E+02 0.0052 18.1 3.8 19 27-45 259-277 (292)
464 PF09984 DUF2222: Uncharacteri 20.1 1.8E+02 0.0038 16.8 2.8 26 26-51 49-75 (146)
No 1
>KOG0279|consensus
Probab=99.87 E-value=3.1e-21 Score=115.50 Aligned_cols=100 Identities=23% Similarity=0.316 Sum_probs=83.8
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
+.+||+++++||..+++....|.+|...|.+++|++|.+.|++|+.|++|++|+........-.... . -.-++++.|
T Consensus 80 S~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~-~--~~WVscvrf 156 (315)
T KOG0279|consen 80 SASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDS-H--REWVSCVRF 156 (315)
T ss_pred eccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCC-C--cCcEEEEEE
Confidence 5789999999999999999999999999999999999999999999999999999876554311111 0 134678899
Q ss_pred ccCC-CEEEEeccccCCccccCceEEEeecC
Q psy8803 82 NESD-TLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 82 ~~~~-~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|.. +.+++++ +.|++|++||++
T Consensus 157 sP~~~~p~Ivs~-------s~DktvKvWnl~ 180 (315)
T KOG0279|consen 157 SPNESNPIIVSA-------SWDKTVKVWNLR 180 (315)
T ss_pred cCCCCCcEEEEc-------cCCceEEEEccC
Confidence 9964 6667777 999999999985
No 2
>KOG0272|consensus
Probab=99.85 E-value=1.2e-21 Score=122.42 Aligned_cols=99 Identities=19% Similarity=0.194 Sum_probs=85.8
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
+|+++|.+=++||++++..+...+||...|.+++|.|||.++++|+.|..-+|||++++.+... ......++..|+
T Consensus 277 ~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~----L~gH~k~I~~V~ 352 (459)
T KOG0272|consen 277 GTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMF----LAGHIKEILSVA 352 (459)
T ss_pred eecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEE----ecccccceeeEe
Confidence 4789999999999999999999999999999999999999999999999999999999877652 111235667788
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|++..+ ++| +.|++++|||+|
T Consensus 353 fsPNGy~l-ATg-------s~Dnt~kVWDLR 375 (459)
T KOG0272|consen 353 FSPNGYHL-ATG-------SSDNTCKVWDLR 375 (459)
T ss_pred ECCCceEE-eec-------CCCCcEEEeeec
Confidence 99999776 566 889999999986
No 3
>KOG0271|consensus
Probab=99.85 E-value=3.8e-21 Score=119.44 Aligned_cols=100 Identities=20% Similarity=0.256 Sum_probs=85.0
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee-----eecceeeeecCc
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK-----YSHDMKTFSWKY 75 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~-----~~~~~~~~~~~~ 75 (111)
|+++.|.++|+||..+..+..+.++|...|.|++|+|||..|++|+.|+.|++||.+++.... |...|.+++|.|
T Consensus 131 ~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep 210 (480)
T KOG0271|consen 131 VTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEP 210 (480)
T ss_pred EecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecc
Confidence 578899999999999999999999999999999999999999999999999999998865443 777888888875
Q ss_pred eeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 76 TQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
. -..|+.. .++++ +.||.|+|||+.
T Consensus 211 ~---hl~p~~r-~las~-------skDg~vrIWd~~ 235 (480)
T KOG0271|consen 211 L---HLVPPCR-RLASS-------SKDGSVRIWDTK 235 (480)
T ss_pred c---ccCCCcc-ceecc-------cCCCCEEEEEcc
Confidence 3 2344555 45666 899999999963
No 4
>KOG0263|consensus
Probab=99.84 E-value=1.9e-20 Score=123.69 Aligned_cols=99 Identities=24% Similarity=0.345 Sum_probs=83.0
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
||++.|.+||+||+.+|..++.|.||.+.|.+++|||+|++|++|++|+.|++||+.++..... ..... +.+.++.
T Consensus 551 aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~---l~~Ht-~ti~Sls 626 (707)
T KOG0263|consen 551 ATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQ---LKGHT-GTIYSLS 626 (707)
T ss_pred ccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhh---hhccc-CceeEEE
Confidence 6889999999999999999999999999999999999999999999999999999998765441 11111 3455678
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+.++..+ ++| +.|+.|++||+.
T Consensus 627 FS~dg~vL-asg-------g~DnsV~lWD~~ 649 (707)
T KOG0263|consen 627 FSRDGNVL-ASG-------GADNSVRLWDLT 649 (707)
T ss_pred EecCCCEE-Eec-------CCCCeEEEEEch
Confidence 88888776 555 789999999973
No 5
>KOG0272|consensus
Probab=99.84 E-value=1.7e-20 Score=117.31 Aligned_cols=99 Identities=21% Similarity=0.266 Sum_probs=86.2
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
+|++.|..-+|||++++.++..|.+|.+.|..++|+|+|..|+||+.|.+++|||++...... .+..+. +.+..|.
T Consensus 319 ~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly---~ipAH~-nlVS~Vk 394 (459)
T KOG0272|consen 319 ATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELY---TIPAHS-NLVSQVK 394 (459)
T ss_pred eccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccce---eccccc-chhhheE
Confidence 578899999999999999999999999999999999999999999999999999999766544 244333 4566789
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
|+|....+++++ +.|++++||.-
T Consensus 395 ~~p~~g~fL~Ta-------syD~t~kiWs~ 417 (459)
T KOG0272|consen 395 YSPQEGYFLVTA-------SYDNTVKIWST 417 (459)
T ss_pred ecccCCeEEEEc-------ccCcceeeecC
Confidence 999788888888 99999999964
No 6
>KOG0266|consensus
Probab=99.82 E-value=4.1e-19 Score=115.95 Aligned_cols=99 Identities=23% Similarity=0.280 Sum_probs=82.3
Q ss_pred CcccccCeeeecCC-CCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 1 KKSWYEEYKRLDYH-TPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 1 ~~~~~d~~i~iw~~-~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
++++.|++++|||+ ..+..+..+.+|...|++++|+|+++++++|+.|++|++||++++.+... ...+. .+++.+
T Consensus 219 ~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~---l~~hs-~~is~~ 294 (456)
T KOG0266|consen 219 LSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRK---LKGHS-DGISGL 294 (456)
T ss_pred EEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEe---eeccC-CceEEE
Confidence 46789999999999 55588999999999999999999999999999999999999998766541 22221 456678
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|++++..+++ + +.|+.|+|||+.
T Consensus 295 ~f~~d~~~l~s-~-------s~d~~i~vwd~~ 318 (456)
T KOG0266|consen 295 AFSPDGNLLVS-A-------SYDGTIRVWDLE 318 (456)
T ss_pred EECCCCCEEEE-c-------CCCccEEEEECC
Confidence 88999888754 4 679999999974
No 7
>KOG0279|consensus
Probab=99.81 E-value=2.9e-19 Score=107.13 Aligned_cols=96 Identities=16% Similarity=0.209 Sum_probs=81.6
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
+.++|+++++||++..+...++.+|++.+..+.+||||.++++|+.|+.+.+||++..+.++.... ..+++.++|
T Consensus 167 s~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a-----~~~v~sl~f 241 (315)
T KOG0279|consen 167 SASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEA-----FDIVNSLCF 241 (315)
T ss_pred EccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEeccC-----CCeEeeEEe
Confidence 578999999999999999999999999999999999999999999999999999998776653221 246678899
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|....++. ..+..|+|||+.
T Consensus 242 spnrywL~~---------at~~sIkIwdl~ 262 (315)
T KOG0279|consen 242 SPNRYWLCA---------ATATSIKIWDLE 262 (315)
T ss_pred cCCceeEee---------ccCCceEEEecc
Confidence 999877765 346669999974
No 8
>KOG0277|consensus
Probab=99.81 E-value=6.2e-19 Score=104.84 Aligned_cols=95 Identities=15% Similarity=0.284 Sum_probs=79.8
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCC-ceee---eecceeeeecCce
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYP-SKVK---YSHDMKTFSWKYT 76 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~-~~~~---~~~~~~~~~~~~~ 76 (111)
+|+||++||+|+....+.+.++.+|...|+...|+|. .+++++++.|+.+++||++.. +.+. |..++.
T Consensus 122 tsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil------- 194 (311)
T KOG0277|consen 122 TSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEIL------- 194 (311)
T ss_pred eeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeE-------
Confidence 6899999999999999999999999999999999995 899999999999999999763 3222 333444
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
++.|+.-...++++| +.|+.|++||+|
T Consensus 195 -~cdw~ky~~~vl~Tg-------~vd~~vr~wDir 221 (311)
T KOG0277|consen 195 -CCDWSKYNHNVLATG-------GVDNLVRGWDIR 221 (311)
T ss_pred -eecccccCCcEEEec-------CCCceEEEEehh
Confidence 455566777888888 899999999986
No 9
>KOG0286|consensus
Probab=99.79 E-value=2.1e-18 Score=104.15 Aligned_cols=98 Identities=18% Similarity=0.193 Sum_probs=83.8
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcC-CCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSH-NGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
|++.|.++.+||+++++.+..|.+|.+.|.+++++| +++.+++|+.|+..++||++.+.+.+. ..... +-++.|+
T Consensus 161 T~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qt---F~ghe-sDINsv~ 236 (343)
T KOG0286|consen 161 TGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQT---FEGHE-SDINSVR 236 (343)
T ss_pred ecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEe---ecccc-cccceEE
Confidence 789999999999999999999999999999999999 899999999999999999998766541 11111 3456788
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|.|++..+ ++| +.|+++++||+|
T Consensus 237 ffP~G~af-atG-------SDD~tcRlyDlR 259 (343)
T KOG0286|consen 237 FFPSGDAF-ATG-------SDDATCRLYDLR 259 (343)
T ss_pred EccCCCee-eec-------CCCceeEEEeec
Confidence 89888775 677 899999999987
No 10
>KOG0315|consensus
Probab=99.78 E-value=2.9e-18 Score=101.80 Aligned_cols=93 Identities=25% Similarity=0.325 Sum_probs=78.1
Q ss_pred cCeeeecCCCCce--eeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEcc
Q psy8803 6 EEYKRLDYHTPIV--ETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 6 d~~i~iw~~~~~~--~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
..+||+||++++. ++.++++|++.|..+.|..+|+++.+|++||+++|||++...+.. ..... +|+++|..+|
T Consensus 60 ~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR----~~~~~-spVn~vvlhp 134 (311)
T KOG0315|consen 60 NQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQR----NYQHN-SPVNTVVLHP 134 (311)
T ss_pred CCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccch----hccCC-CCcceEEecC
Confidence 4689999999874 688999999999999999999999999999999999999855443 22222 6788899999
Q ss_pred CCCEEEEeccccCCccccCceEEEeecC
Q psy8803 84 SDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.+..|++ | ..++.|+|||++
T Consensus 135 nQteLis-~-------dqsg~irvWDl~ 154 (311)
T KOG0315|consen 135 NQTELIS-G-------DQSGNIRVWDLG 154 (311)
T ss_pred CcceEEe-e-------cCCCcEEEEEcc
Confidence 9888765 3 678899999985
No 11
>KOG0266|consensus
Probab=99.78 E-value=4.9e-18 Score=110.94 Aligned_cols=100 Identities=21% Similarity=0.232 Sum_probs=84.3
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCce--eeeecceeeeecC-cee
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSK--VKYSHDMKTFSWK-YTQ 77 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~--~~~~~~~~~~~~~-~~~ 77 (111)
+++++|++|+|||++.++++..+.+|.+.|.+++|+++++.|++++.|+.|++||+.++.. ... +...... +++
T Consensus 262 ~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~---~~~~~~~~~~~ 338 (456)
T KOG0266|consen 262 VSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKL---LSGAENSAPVT 338 (456)
T ss_pred EEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeec---ccCCCCCCcee
Confidence 4678999999999999999999999999999999999999999999999999999998773 331 2222223 577
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.++|+|++.++++. ..|+.+++||++
T Consensus 339 ~~~fsp~~~~ll~~--------~~d~~~~~w~l~ 364 (456)
T KOG0266|consen 339 SVQFSPNGKYLLSA--------SLDRTLKLWDLR 364 (456)
T ss_pred EEEECCCCcEEEEe--------cCCCeEEEEEcc
Confidence 89999999998764 578899999975
No 12
>KOG0647|consensus
Probab=99.77 E-value=1.6e-18 Score=105.02 Aligned_cols=97 Identities=16% Similarity=0.166 Sum_probs=77.5
Q ss_pred CcccccCeeeecCCCC-ceeee-eeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee---eecceeeeecCc
Q psy8803 1 KKSWYEEYKRLDYHTP-IVETE-VLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK---YSHDMKTFSWKY 75 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~-~~~~~-~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~---~~~~~~~~~~~~ 75 (111)
+.++||++||+|++.. +..+. ....|++.|.+++|+.||..+++++.|+.+++||+.+++... |...++.+.|.
T Consensus 44 ~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~~~v~~Hd~pvkt~~wv- 122 (347)
T KOG0647|consen 44 AAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQVSQVAAHDAPVKTCHWV- 122 (347)
T ss_pred EecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCCeeeeeecccceeEEEEe-
Confidence 4689999999999975 33332 224589999999999999999999999999999999876543 66667666663
Q ss_pred eeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 76 TQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.+....++++| +.|.+|++||+|
T Consensus 123 ------~~~~~~cl~TG-------SWDKTlKfWD~R 145 (347)
T KOG0647|consen 123 ------PGMNYQCLVTG-------SWDKTLKFWDTR 145 (347)
T ss_pred ------cCCCcceeEec-------ccccceeecccC
Confidence 22335678999 999999999986
No 13
>PTZ00421 coronin; Provisional
Probab=99.77 E-value=1.3e-17 Score=109.54 Aligned_cols=104 Identities=14% Similarity=0.164 Sum_probs=80.3
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++.|++|+|||+.+++.+..+.+|...|.+++|+|++.+|++++.|++|++||++++..... .....-.....+.
T Consensus 142 aSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~t---l~~H~~~~~~~~~ 218 (493)
T PTZ00421 142 ASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSS---VEAHASAKSQRCL 218 (493)
T ss_pred EEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEE---EecCCCCcceEEE
Confidence 3678899999999999998889999999999999999999999999999999999998765431 1111101123456
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|.++...++++|.. . +.|+.|++||++
T Consensus 219 w~~~~~~ivt~G~s--~--s~Dr~VklWDlr 245 (493)
T PTZ00421 219 WAKRKDLIITLGCS--K--SQQRQIMLWDTR 245 (493)
T ss_pred EcCCCCeEEEEecC--C--CCCCeEEEEeCC
Confidence 77887787766511 1 358899999985
No 14
>KOG0285|consensus
Probab=99.77 E-value=3e-18 Score=106.05 Aligned_cols=95 Identities=16% Similarity=0.192 Sum_probs=81.6
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee----eecceeeeecCce
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK----YSHDMKTFSWKYT 76 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~~~~~~~~ 76 (111)
|+++.|++++|||+.++++..++.||-..|..+++|+...+++++++|+.++.||++..+.+. |.. .+
T Consensus 167 ~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS--------~V 238 (460)
T KOG0285|consen 167 ATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLS--------GV 238 (460)
T ss_pred EecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccccc--------ee
Confidence 588999999999999999999999999999999999999999999999999999999876554 433 44
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.+++.+|....+ ++| +.|.+++|||+|
T Consensus 239 ~~L~lhPTldvl-~t~-------grDst~RvWDiR 265 (460)
T KOG0285|consen 239 YCLDLHPTLDVL-VTG-------GRDSTIRVWDIR 265 (460)
T ss_pred EEEeccccceeE-Eec-------CCcceEEEeeec
Confidence 455667777665 555 789999999987
No 15
>PTZ00421 coronin; Provisional
Probab=99.75 E-value=1.9e-17 Score=108.73 Aligned_cols=99 Identities=17% Similarity=0.099 Sum_probs=78.7
Q ss_pred CcccccCeeeecCCCCc-------eeeeeeecccccEEEEEEcCCC-cEEEEEeCCCeEEEEecCCCceeeeecceeeee
Q psy8803 1 KKSWYEEYKRLDYHTPI-------VETEVLTQHTHQVLHVSFSHNG-RYFATCSKDGYILVWTSSYPSKVKYSHDMKTFS 72 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~-------~~~~~~~~~~~~v~~i~~s~~~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~ 72 (111)
++++.|++|++||+..+ .++..+.+|...|.+++|+|++ ++|++++.|+.|++||++....... +...
T Consensus 92 aSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~---l~~h- 167 (493)
T PTZ00421 92 FTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEV---IKCH- 167 (493)
T ss_pred EEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEE---EcCC-
Confidence 46789999999999754 3567788999999999999985 7999999999999999987654431 1111
Q ss_pred cCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 73 WKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 73 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
-..+++++|+|++..+ +++ +.|+.|+|||+|
T Consensus 168 ~~~V~sla~spdG~lL-atg-------s~Dg~IrIwD~r 198 (493)
T PTZ00421 168 SDQITSLEWNLDGSLL-CTT-------SKDKKLNIIDPR 198 (493)
T ss_pred CCceEEEEEECCCCEE-EEe-------cCCCEEEEEECC
Confidence 1456788899988765 555 789999999975
No 16
>KOG0302|consensus
Probab=99.75 E-value=9.8e-18 Score=104.17 Aligned_cols=100 Identities=12% Similarity=0.190 Sum_probs=76.9
Q ss_pred CcccccCeeeecCCCCce--eeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeec--Cce
Q psy8803 1 KKSWYEEYKRLDYHTPIV--ETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSW--KYT 76 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~--~~~ 76 (111)
|+.+-||+|+|||++.+. .....++|.+-|.-|.|+.+-.+|++|+.||+++|||++..+... ++....+ .|+
T Consensus 274 aScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~---pVA~fk~Hk~pI 350 (440)
T KOG0302|consen 274 ASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQ---PVATFKYHKAPI 350 (440)
T ss_pred EeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCC---cceeEEeccCCe
Confidence 456789999999999872 222338899999999999887799999999999999998743321 2222111 577
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+++.|+|.+...++++ +.|.+|.||||
T Consensus 351 tsieW~p~e~s~iaas-------g~D~QitiWDl 377 (440)
T KOG0302|consen 351 TSIEWHPHEDSVIAAS-------GEDNQITIWDL 377 (440)
T ss_pred eEEEeccccCceEEec-------cCCCcEEEEEe
Confidence 7888899766666666 78999999997
No 17
>KOG0295|consensus
Probab=99.74 E-value=4.7e-17 Score=100.69 Aligned_cols=97 Identities=19% Similarity=0.281 Sum_probs=83.0
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
+.+.|++|++||+.++.++.+|.+|...|..++|+|.|++|+++.+|+++++||+++.+++.. .. ..-..++++.|
T Consensus 309 s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~---~~-ah~hfvt~lDf 384 (406)
T KOG0295|consen 309 SGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKT---LE-AHEHFVTSLDF 384 (406)
T ss_pred eecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeec---cC-CCcceeEEEec
Confidence 468999999999999999999999999999999999999999999999999999999888862 11 11245677788
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+....+ +++| +-|.++++|.=
T Consensus 385 h~~~p~-VvTG-------sVdqt~KvwEc 405 (406)
T KOG0295|consen 385 HKTAPY-VVTG-------SVDQTVKVWEC 405 (406)
T ss_pred CCCCce-EEec-------cccceeeeeec
Confidence 877765 5777 89999999964
No 18
>KOG0271|consensus
Probab=99.74 E-value=7.6e-18 Score=105.01 Aligned_cols=93 Identities=15% Similarity=0.246 Sum_probs=80.4
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee----eecceeeeecCce
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK----YSHDMKTFSWKYT 76 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~~~~~~~~ 76 (111)
|+.++|..|++|+-++|+.+..|.||-..|+.++|+.|.++|++|+.|.++++|++++.+... |..++.++.|
T Consensus 383 ASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDw--- 459 (480)
T KOG0271|consen 383 ASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDW--- 459 (480)
T ss_pred EEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEe---
Confidence 578999999999999999999999999999999999999999999999999999999865433 5556665555
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEee
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
+|++..+ ++| +.|..+++|.
T Consensus 460 -----spDG~rV-~sg-------gkdkv~~lw~ 479 (480)
T KOG0271|consen 460 -----SPDGQRV-ASG-------GKDKVLRLWR 479 (480)
T ss_pred -----cCCCcee-ecC-------CCceEEEeec
Confidence 6677664 666 7899999995
No 19
>KOG0286|consensus
Probab=99.74 E-value=3.4e-17 Score=99.04 Aligned_cols=98 Identities=19% Similarity=0.162 Sum_probs=82.4
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee-eecceeeeecCceeeEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK-YSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~-~~~~~~~~~~~~~~~v~ 80 (111)
+++-|++.+|||++.+.++.+|.+|++.|..+.|.|+|.-|++|++|+++++||++..+.+. +.. .....++++++
T Consensus 204 Sg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~---~~~~~gitSv~ 280 (343)
T KOG0286|consen 204 SGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSH---DSIICGITSVA 280 (343)
T ss_pred ecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeecc---CcccCCceeEE
Confidence 56779999999999999999999999999999999999999999999999999999876554 211 11126788999
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
|+..+.+|++ | -.|..+.+||.
T Consensus 281 FS~SGRlLfa-g-------y~d~~c~vWDt 302 (343)
T KOG0286|consen 281 FSKSGRLLFA-G-------YDDFTCNVWDT 302 (343)
T ss_pred EcccccEEEe-e-------ecCCceeEeec
Confidence 9999988765 3 46788999984
No 20
>KOG0282|consensus
Probab=99.73 E-value=6.6e-18 Score=107.30 Aligned_cols=98 Identities=14% Similarity=0.219 Sum_probs=85.3
Q ss_pred cccccCeeeecCCCC-ceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 2 KSWYEEYKRLDYHTP-IVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~-~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
+++.|+.|+||++.. +.++.++.+|...|..++|+++|.-|++++-|+.+++||.+++++.... .. -..+.++.
T Consensus 232 S~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f----~~-~~~~~cvk 306 (503)
T KOG0282|consen 232 SGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRF----HL-DKVPTCVK 306 (503)
T ss_pred ecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEE----ec-CCCceeee
Confidence 578999999999986 7899999999999999999999999999999999999999998876511 11 14566889
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|++..++.+| ..|+.|+.||+|
T Consensus 307 f~pd~~n~fl~G-------~sd~ki~~wDiR 330 (503)
T KOG0282|consen 307 FHPDNQNIFLVG-------GSDKKIRQWDIR 330 (503)
T ss_pred cCCCCCcEEEEe-------cCCCcEEEEecc
Confidence 999998888888 889999999987
No 21
>KOG0273|consensus
Probab=99.73 E-value=2.7e-17 Score=104.45 Aligned_cols=104 Identities=19% Similarity=0.305 Sum_probs=94.1
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCcee----eeecceeeeecCce
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKV----KYSHDMKTFSWKYT 76 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~----~~~~~~~~~~~~~~ 76 (111)
|+++.|+.|+++.+....++.++.+|.+.|.++.|.|.+.+|++++.|++++||.+...... .|..++..+.|+|.
T Consensus 333 ~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~ 412 (524)
T KOG0273|consen 333 ATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPT 412 (524)
T ss_pred eecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCC
Confidence 57889999999999999999999999999999999999999999999999999998764333 38889999999999
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
..+..+|....+++++ +.|++|++||+.
T Consensus 413 g~v~~n~~~~~~l~sa-------s~dstV~lwdv~ 440 (524)
T KOG0273|consen 413 GPVTSNPNMNLMLASA-------SFDSTVKLWDVE 440 (524)
T ss_pred CCccCCCcCCceEEEe-------ecCCeEEEEEcc
Confidence 9999999888888887 899999999973
No 22
>KOG0313|consensus
Probab=99.72 E-value=3.4e-17 Score=101.74 Aligned_cols=99 Identities=15% Similarity=0.216 Sum_probs=80.4
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCc--eeeeecceeeeecCceeeE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPS--KVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~~~~~~v 79 (111)
+.+||++|+.||+.++..+.++. ....+.++..+|..++|++|+.|+.|++||.+.+. ...+ ....+. +.++.+
T Consensus 276 S~SwDHTIk~WDletg~~~~~~~-~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~--s~~gH~-nwVssv 351 (423)
T KOG0313|consen 276 SVSWDHTIKVWDLETGGLKSTLT-TNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQ--SLIGHK-NWVSSV 351 (423)
T ss_pred eecccceEEEEEeecccceeeee-cCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEE--eeecch-hhhhhe
Confidence 57899999999999999888887 45688999999999999999999999999998752 2221 111111 234567
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.++|...++++++ +.|+++++||+|
T Consensus 352 kwsp~~~~~~~S~-------S~D~t~klWDvR 376 (423)
T KOG0313|consen 352 KWSPTNEFQLVSG-------SYDNTVKLWDVR 376 (423)
T ss_pred ecCCCCceEEEEE-------ecCCeEEEEEec
Confidence 7788999999999 999999999987
No 23
>KOG0283|consensus
Probab=99.72 E-value=7e-17 Score=107.62 Aligned_cols=96 Identities=21% Similarity=0.259 Sum_probs=80.7
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcC-CCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSH-NGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
+++.|.|||||.+....++..|. |...|+|++|+| |.++|++|+.|++++||++...+... -+.+. .-++.++
T Consensus 385 SSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~----W~Dl~-~lITAvc 458 (712)
T KOG0283|consen 385 SSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVD----WNDLR-DLITAVC 458 (712)
T ss_pred eccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEe----ehhhh-hhheeEE
Confidence 68999999999999999998887 999999999999 78999999999999999998766554 12222 4567899
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|.|++... +.| +..|.+++|+.+
T Consensus 459 y~PdGk~a-vIG-------t~~G~C~fY~t~ 481 (712)
T KOG0283|consen 459 YSPDGKGA-VIG-------TFNGYCRFYDTE 481 (712)
T ss_pred eccCCceE-EEE-------EeccEEEEEEcc
Confidence 99998775 455 789999999853
No 24
>KOG0263|consensus
Probab=99.72 E-value=4e-17 Score=108.25 Aligned_cols=99 Identities=24% Similarity=0.258 Sum_probs=86.1
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
||.+.|++-++|......+.+.+-+|.+.|.|+.|+|+..++++||.|+++++||+.++..+. +....-.++..++
T Consensus 509 atas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VR----iF~GH~~~V~al~ 584 (707)
T KOG0263|consen 509 ATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVR----IFTGHKGPVTALA 584 (707)
T ss_pred EecCCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEE----EecCCCCceEEEE
Confidence 578999999999999899999999999999999999999999999999999999999887765 2222236778899
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|.+.+| ++| +.|+.|.+||+.
T Consensus 585 ~Sp~Gr~L-aSg-------~ed~~I~iWDl~ 607 (707)
T KOG0263|consen 585 FSPCGRYL-ASG-------DEDGLIKIWDLA 607 (707)
T ss_pred EcCCCceE-eec-------ccCCcEEEEEcC
Confidence 99988775 777 899999999974
No 25
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.71 E-value=2.2e-16 Score=108.98 Aligned_cols=99 Identities=18% Similarity=0.230 Sum_probs=80.3
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcC-CCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSH-NGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
|+++.||+|++||+.+++.+..+.+|.+.|.+++|+| ++.+|++++.|+.+++||++........ .. . ..+.++
T Consensus 549 as~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~---~~-~-~~v~~v 623 (793)
T PLN00181 549 ASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTI---KT-K-ANICCV 623 (793)
T ss_pred EEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEE---ec-C-CCeEEE
Confidence 4678899999999999998999999999999999997 7899999999999999999876654421 11 1 245567
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|+++...++++| +.|+.|++||++
T Consensus 624 ~~~~~~g~~latg-------s~dg~I~iwD~~ 648 (793)
T PLN00181 624 QFPSESGRSLAFG-------SADHKVYYYDLR 648 (793)
T ss_pred EEeCCCCCEEEEE-------eCCCeEEEEECC
Confidence 8876655556777 889999999975
No 26
>KOG0273|consensus
Probab=99.71 E-value=1.9e-16 Score=100.66 Aligned_cols=98 Identities=24% Similarity=0.329 Sum_probs=83.1
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++.++|++|++||+..+.++..|..|+.+|+.++|+|+|+++++|+.|+.+.+|+.+..+.++....- ..+..++
T Consensus 426 ~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~~-----~~Ifel~ 500 (524)
T KOG0273|consen 426 ASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQGT-----GGIFELC 500 (524)
T ss_pred EEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeecCC-----CeEEEEE
Confidence 46789999999999999999999999999999999999999999999999999999998877632111 2345678
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+..+.++.++. .|+.+++.|+|
T Consensus 501 Wn~~G~kl~~~~--------sd~~vcvldlr 523 (524)
T KOG0273|consen 501 WNAAGDKLGACA--------SDGSVCVLDLR 523 (524)
T ss_pred EcCCCCEEEEEe--------cCCCceEEEec
Confidence 888898887654 58889999886
No 27
>KOG0315|consensus
Probab=99.70 E-value=1.5e-16 Score=94.66 Aligned_cols=100 Identities=11% Similarity=0.116 Sum_probs=80.5
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
+++++|.+||+|...+|.+..++.-.++.|..+...||++.|+.++. -.|++||+++...... .-....-..+..|.
T Consensus 14 vsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv--~t~e~h~kNVtaVg 90 (311)
T KOG0315|consen 14 VSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPV--ATFEGHTKNVTAVG 90 (311)
T ss_pred EeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCce--eEEeccCCceEEEE
Confidence 47899999999999999999999977899999999999999999885 5899999987654320 00111114566788
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|..++..+ .+| +.||+++|||||
T Consensus 91 F~~dgrWM-yTg-------seDgt~kIWdlR 113 (311)
T KOG0315|consen 91 FQCDGRWM-YTG-------SEDGTVKIWDLR 113 (311)
T ss_pred EeecCeEE-Eec-------CCCceEEEEecc
Confidence 88888776 666 899999999997
No 28
>KOG0291|consensus
Probab=99.70 E-value=1.7e-16 Score=105.59 Aligned_cols=102 Identities=18% Similarity=0.173 Sum_probs=82.5
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee-----------------
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK----------------- 63 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~----------------- 63 (111)
||+..||.|++||..++-++.+|..|++.|..+.|+..++.+++++.||+++.||+...+...
T Consensus 366 aTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~ 445 (893)
T KOG0291|consen 366 ATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDP 445 (893)
T ss_pred EeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcC
Confidence 578899999999999999999999999999999999999999999999999999986421110
Q ss_pred -----------------------eecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 64 -----------------------YSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 64 -----------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+.-.+....-+|+.+++|+|.+..+ +++ ++|.+|++||+
T Consensus 446 sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~L-aS~-------SWDkTVRiW~i 507 (893)
T KOG0291|consen 446 SGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLL-ASG-------SWDKTVRIWDI 507 (893)
T ss_pred CCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeE-Eec-------cccceEEEEEe
Confidence 0001111222467788999999865 777 99999999996
No 29
>PTZ00420 coronin; Provisional
Probab=99.70 E-value=6.1e-16 Score=102.79 Aligned_cols=103 Identities=8% Similarity=0.086 Sum_probs=75.7
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee----eecceeeeecCce
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK----YSHDMKTFSWKYT 76 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~~~~~~~~ 76 (111)
|+++.|++|+|||+++++.+..+. |...|.+++|+|+|.+|++++.|+.+++||++.+.... |...+.... +
T Consensus 142 aSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~---v 217 (568)
T PTZ00420 142 CSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKN---I 217 (568)
T ss_pred EEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEE---E
Confidence 357889999999999888777776 66789999999999999999999999999999876543 322221111 1
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
....|++++..++++|.+.. .+++|+|||++
T Consensus 218 ~~~~fs~d~~~IlTtG~d~~----~~R~VkLWDlr 248 (568)
T PTZ00420 218 WIDGLGGDDNYILSTGFSKN----NMREMKLWDLK 248 (568)
T ss_pred EeeeEcCCCCEEEEEEcCCC----CccEEEEEECC
Confidence 12356778888877761111 13589999985
No 30
>KOG0264|consensus
Probab=99.70 E-value=8.6e-17 Score=101.32 Aligned_cols=102 Identities=20% Similarity=0.307 Sum_probs=81.4
Q ss_pred CcccccCeeeecCCCCc-------eeeeeeecccccEEEEEEcC-CCcEEEEEeCCCeEEEEecCCCceeeeecceeeee
Q psy8803 1 KKSWYEEYKRLDYHTPI-------VETEVLTQHTHQVLHVSFSH-NGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFS 72 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~-------~~~~~~~~~~~~v~~i~~s~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~ 72 (111)
++++.|++|++||+... .+...+.+|.+.|..++|++ +..+|+++++|+.+.|||.|.. .......+....
T Consensus 194 ls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~-~~~~~~~~~ah~ 272 (422)
T KOG0264|consen 194 LSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSN-TSKPSHSVKAHS 272 (422)
T ss_pred eeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCC-CCCCcccccccC
Confidence 46789999999999743 34566789999999999999 4789999999999999999963 211111222222
Q ss_pred cCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 73 WKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 73 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.++++++|+|-+..++++| +.|++|++||+|
T Consensus 273 -~~vn~~~fnp~~~~ilAT~-------S~D~tV~LwDlR 303 (422)
T KOG0264|consen 273 -AEVNCVAFNPFNEFILATG-------SADKTVALWDLR 303 (422)
T ss_pred -CceeEEEeCCCCCceEEec-------cCCCcEEEeech
Confidence 5678899999888999999 999999999987
No 31
>KOG0319|consensus
Probab=99.70 E-value=2.1e-16 Score=104.69 Aligned_cols=99 Identities=23% Similarity=0.317 Sum_probs=82.9
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
||++.|.+.+||++.++.....|.||...|.++.|+|..+.++++|.|++++||.+.+..+++. ...+. +.+.-+.
T Consensus 479 AT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT---~eGH~-~aVlra~ 554 (775)
T KOG0319|consen 479 ATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKT---FEGHT-SAVLRAS 554 (775)
T ss_pred EecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeee---ecCcc-ceeEeee
Confidence 6899999999999999999999999999999999999999999999999999999999877761 11111 3344567
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|-..+..++.+ +.||-|++||++
T Consensus 555 F~~~~~qliS~--------~adGliKlWnik 577 (775)
T KOG0319|consen 555 FIRNGKQLISA--------GADGLIKLWNIK 577 (775)
T ss_pred eeeCCcEEEec--------cCCCcEEEEecc
Confidence 77788887554 579999999974
No 32
>PTZ00420 coronin; Provisional
Probab=99.70 E-value=7.6e-16 Score=102.33 Aligned_cols=103 Identities=17% Similarity=0.180 Sum_probs=79.5
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCce-eee-ecc--eeeeecCce
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSK-VKY-SHD--MKTFSWKYT 76 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~-~~~-~~~--~~~~~~~~~ 76 (111)
+++.++.+++|+......+..+.+|.+.|.+++|+|+ +++|++|+.|++|++||+..... ... ... .....-..+
T Consensus 49 gGG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V 128 (568)
T PTZ00420 49 GGGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKI 128 (568)
T ss_pred CCCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcE
Confidence 3566889999998877888889999999999999997 78999999999999999975321 100 000 011111457
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
..++|+|.+..+++++ +.|+.|+|||++
T Consensus 129 ~sVaf~P~g~~iLaSg-------S~DgtIrIWDl~ 156 (568)
T PTZ00420 129 SIIDWNPMNYYIMCSS-------GFDSFVNIWDIE 156 (568)
T ss_pred EEEEECCCCCeEEEEE-------eCCCeEEEEECC
Confidence 7889999988887777 889999999985
No 33
>KOG0292|consensus
Probab=99.69 E-value=7.6e-17 Score=109.04 Aligned_cols=98 Identities=17% Similarity=0.150 Sum_probs=82.7
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
+|.-.|.|++||++-+.++..|..|+++|..+.|+|.+.+|++||+|.+|++|+.+..++.. ....+ ..++.++.|
T Consensus 26 tslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclf---tL~GH-lDYVRt~~F 101 (1202)
T KOG0292|consen 26 TSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLF---TLLGH-LDYVRTVFF 101 (1202)
T ss_pred EeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehh---hhccc-cceeEEeec
Confidence 46678999999999999999999999999999999999999999999999999999876654 11111 246667888
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
++.-..|+. + |.|.+|+|||.+
T Consensus 102 HheyPWIlS-A-------SDDQTIrIWNwq 123 (1202)
T KOG0292|consen 102 HHEYPWILS-A-------SDDQTIRIWNWQ 123 (1202)
T ss_pred cCCCceEEE-c-------cCCCeEEEEecc
Confidence 988888755 4 899999999975
No 34
>KOG0269|consensus
Probab=99.69 E-value=7.9e-17 Score=107.21 Aligned_cols=101 Identities=15% Similarity=0.185 Sum_probs=78.4
Q ss_pred cccccCeeeecCCCC-ceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee-eecceeeeecCceeeE
Q psy8803 2 KSWYEEYKRLDYHTP-IVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK-YSHDMKTFSWKYTQYS 79 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~-~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~-~~~~~~~~~~~~~~~v 79 (111)
+....|.+++||++. .++..++.+|.+.|.|+.|+|++.+||+||.|+.++|||+-+.+... + .|..+ .|+..|
T Consensus 194 s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~--tInTi--apv~rV 269 (839)
T KOG0269|consen 194 SIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKH--TINTI--APVGRV 269 (839)
T ss_pred EecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCcccee--EEeec--ceeeee
Confidence 455679999999985 46788889999999999999999999999999999999998654322 2 23332 467788
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|.|...+.++++. -..|..|+|||+|
T Consensus 270 kWRP~~~~hLAtcs-----mv~dtsV~VWDvr 296 (839)
T KOG0269|consen 270 KWRPARSYHLATCS-----MVVDTSVHVWDVR 296 (839)
T ss_pred eeccCccchhhhhh-----ccccceEEEEeec
Confidence 88997665555441 2347889999986
No 35
>KOG0265|consensus
Probab=99.68 E-value=5.5e-16 Score=94.06 Aligned_cols=99 Identities=14% Similarity=0.207 Sum_probs=79.8
Q ss_pred CcccccCeeeecCCC-CceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee-eecceeeeecCceee
Q psy8803 1 KKSWYEEYKRLDYHT-PIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK-YSHDMKTFSWKYTQY 78 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~-~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~-~~~~~~~~~~~~~~~ 78 (111)
|++++|..|-+|+.. ..+....+++|.+.|..+.|.+|++.+++++.|++++.||++++++.. |...- ..++.
T Consensus 63 aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~-----~~vNs 137 (338)
T KOG0265|consen 63 ASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHT-----SFVNS 137 (338)
T ss_pred eecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhcccc-----ceeee
Confidence 688999999999965 446777888999999999999999999999999999999999987665 21111 22333
Q ss_pred EEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 79 SQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+.-..-+..++.++ +.|+++++||+|
T Consensus 138 ~~p~rrg~~lv~Sg-------sdD~t~kl~D~R 163 (338)
T KOG0265|consen 138 LDPSRRGPQLVCSG-------SDDGTLKLWDIR 163 (338)
T ss_pred cCccccCCeEEEec-------CCCceEEEEeec
Confidence 44344667888888 999999999987
No 36
>KOG0264|consensus
Probab=99.67 E-value=6.6e-16 Score=97.39 Aligned_cols=99 Identities=16% Similarity=0.153 Sum_probs=77.8
Q ss_pred cccccCeeeecCCC--CceeeeeeecccccEEEEEEcC-CCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceee
Q psy8803 2 KSWYEEYKRLDYHT--PIVETEVLTQHTHQVLHVSFSH-NGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQY 78 (111)
Q Consensus 2 ~~~~d~~i~iw~~~--~~~~~~~~~~~~~~v~~i~~s~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (111)
+-+.|+.+.|||.+ +.++...-.+|.+.|.|++|.| ++..||+|+.|+++++||+|+.....|. ...+. ..+..
T Consensus 245 sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~--~e~H~-dev~~ 321 (422)
T KOG0264|consen 245 SVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHT--FEGHE-DEVFQ 321 (422)
T ss_pred eecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCcee--ccCCC-cceEE
Confidence 34679999999999 5566777789999999999999 5788999999999999999985443221 11111 33456
Q ss_pred EEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 79 SQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
|.|+|....++++. +.|+.+.|||+
T Consensus 322 V~WSPh~etvLASS-------g~D~rl~vWDl 346 (422)
T KOG0264|consen 322 VEWSPHNETVLASS-------GTDRRLNVWDL 346 (422)
T ss_pred EEeCCCCCceeEec-------ccCCcEEEEec
Confidence 67788888888888 88999999997
No 37
>KOG0276|consensus
Probab=99.66 E-value=1e-15 Score=100.49 Aligned_cols=99 Identities=17% Similarity=0.123 Sum_probs=87.1
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
+++.|..|++|++++++.+..|++|...|++++.+|..-+++++++|..|++||.+......+ .....-..+..++|
T Consensus 72 ~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~q---tfeGH~HyVMqv~f 148 (794)
T KOG0276|consen 72 TGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQ---TFEGHEHYVMQVAF 148 (794)
T ss_pred EecCCceEEEEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeee---EEcCcceEEEEEEe
Confidence 678999999999999999999999999999999999999999999999999999998765542 22222367889999
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+|.+...++++ +-|++|+||.+
T Consensus 149 nPkD~ntFaS~-------sLDrTVKVWsl 170 (794)
T KOG0276|consen 149 NPKDPNTFASA-------SLDRTVKVWSL 170 (794)
T ss_pred cCCCccceeee-------eccccEEEEEc
Confidence 99888888888 99999999986
No 38
>KOG0316|consensus
Probab=99.66 E-value=1e-15 Score=90.59 Aligned_cols=98 Identities=19% Similarity=0.281 Sum_probs=82.4
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
+...|.++++|+...+.+++++.+|..+|..++.+.|...|++|+.|+.+.+||+.+++... ..+.+. ..++.|+|
T Consensus 34 tcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~R---r~rgH~-aqVNtV~f 109 (307)
T KOG0316|consen 34 TCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDR---RFRGHL-AQVNTVRF 109 (307)
T ss_pred EcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeee---eccccc-ceeeEEEe
Confidence 45789999999999999999999999999999999999999999999999999999988765 222222 45667777
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+.+. .++++| +.|.++++||-|
T Consensus 110 Nees-SVv~Sg-------sfD~s~r~wDCR 131 (307)
T KOG0316|consen 110 NEES-SVVASG-------SFDSSVRLWDCR 131 (307)
T ss_pred cCcc-eEEEec-------cccceeEEEEcc
Confidence 8554 556788 999999999954
No 39
>KOG0645|consensus
Probab=99.65 E-value=3.6e-15 Score=89.56 Aligned_cols=93 Identities=23% Similarity=0.365 Sum_probs=75.6
Q ss_pred CcccccCeeeecCCCCc--eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCce-------eeeecceeee
Q psy8803 1 KKSWYEEYKRLDYHTPI--VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSK-------VKYSHDMKTF 71 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~--~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~-------~~~~~~~~~~ 71 (111)
|++++|.++.||.-..+ +++..|+||...|.+++|+++|++||+++.|+.+=||.+..... ..|.+.+..+
T Consensus 77 a~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V 156 (312)
T KOG0645|consen 77 ASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHV 156 (312)
T ss_pred EEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEE
Confidence 56899999999998766 68889999999999999999999999999999999999874322 2255666544
Q ss_pred ecCceeeEEEccCCCEEEEeccccCCccccCceEEEee
Q psy8803 72 SWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 72 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
.|+|....| +++ +.|++|++|+
T Consensus 157 --------~WHPt~dlL-~S~-------SYDnTIk~~~ 178 (312)
T KOG0645|consen 157 --------IWHPTEDLL-FSC-------SYDNTIKVYR 178 (312)
T ss_pred --------EEcCCccee-EEe-------ccCCeEEEEe
Confidence 456666554 666 8999999996
No 40
>KOG0276|consensus
Probab=99.64 E-value=3.8e-15 Score=97.84 Aligned_cols=95 Identities=22% Similarity=0.282 Sum_probs=76.9
Q ss_pred cccccCeeeecCCCCc-eeeeeeecccccEEEEEEcC-CCcEEEEEeCCCeEEEEecCCCcee----eeecceeeeecCc
Q psy8803 2 KSWYEEYKRLDYHTPI-VETEVLTQHTHQVLHVSFSH-NGRYFATCSKDGYILVWTSSYPSKV----KYSHDMKTFSWKY 75 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~-~~~~~~~~~~~~v~~i~~s~-~~~~l~s~~~d~~i~iw~~~~~~~~----~~~~~~~~~~~~~ 75 (111)
+|+.|-+|++||-..+ .+...|+||+..|++++|.| |.+.+++++.|+++++|.+....+. .|...
T Consensus 114 tsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekG-------- 185 (794)
T KOG0276|consen 114 TSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKG-------- 185 (794)
T ss_pred ecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccC--------
Confidence 7899999999999865 78889999999999999999 5789999999999999999765432 24444
Q ss_pred eeeEEEcc-CCCEEEEeccccCCccccCceEEEeecC
Q psy8803 76 TQYSQFNE-SDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 76 ~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+++|.|-+ .+...+++| +.|..|+|||.+
T Consensus 186 VN~Vdyy~~gdkpylIsg-------aDD~tiKvWDyQ 215 (794)
T KOG0276|consen 186 VNCVDYYTGGDKPYLISG-------ADDLTIKVWDYQ 215 (794)
T ss_pred cceEEeccCCCcceEEec-------CCCceEEEeecc
Confidence 44555555 444556777 889999999975
No 41
>KOG0295|consensus
Probab=99.64 E-value=2.4e-15 Score=93.25 Aligned_cols=99 Identities=15% Similarity=0.228 Sum_probs=80.2
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCC----------C-----cEEEEEeCCCeEEEEecCCCceeeee
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHN----------G-----RYFATCSKDGYILVWTSSYPSKVKYS 65 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~----------~-----~~l~s~~~d~~i~iw~~~~~~~~~~~ 65 (111)
|+.+.|.++++|-..++++...+..|+..|.|++|.|+ + +.+++++.|++|++||+.++.++..
T Consensus 251 As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~t- 329 (406)
T KOG0295|consen 251 ASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFT- 329 (406)
T ss_pred EecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEE-
Confidence 56789999999999999888889999999999999773 2 4889999999999999999876641
Q ss_pred cceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 66 HDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 66 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
...+. +.+..++|+|.+.+|+.+ ..|+++++||++
T Consensus 330 --L~ghd-nwVr~~af~p~Gkyi~Sc--------aDDktlrvwdl~ 364 (406)
T KOG0295|consen 330 --LVGHD-NWVRGVAFSPGGKYILSC--------ADDKTLRVWDLK 364 (406)
T ss_pred --Eeccc-ceeeeeEEcCCCeEEEEE--------ecCCcEEEEEec
Confidence 22222 345567889999887665 579999999985
No 42
>KOG0292|consensus
Probab=99.64 E-value=1.9e-15 Score=102.46 Aligned_cols=97 Identities=20% Similarity=0.187 Sum_probs=85.4
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
+++.|..|++|++.+.+++.+|.||...|..+.|++.--+|+++|+|-+|+||+..+..+.. +.....+++.+.+|
T Consensus 68 SGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~ia----vltGHnHYVMcAqF 143 (1202)
T KOG0292|consen 68 SGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIA----VLTGHNHYVMCAQF 143 (1202)
T ss_pred ecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEE----EEecCceEEEeecc
Confidence 57889999999999999999999999999999999999999999999999999999988775 33333467888899
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+|.+..+ +++ |-|.+|+|||+
T Consensus 144 hptEDlI-VSa-------SLDQTVRVWDi 164 (1202)
T KOG0292|consen 144 HPTEDLI-VSA-------SLDQTVRVWDI 164 (1202)
T ss_pred CCccceE-EEe-------cccceEEEEee
Confidence 9977665 666 89999999996
No 43
>KOG0285|consensus
Probab=99.64 E-value=1.2e-15 Score=94.70 Aligned_cols=97 Identities=12% Similarity=0.121 Sum_probs=80.8
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEc
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFN 82 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 82 (111)
.+-|+.|+-||+...+.+..+.||-+.|+|++.+|.-+.|++++.|.++++||+++...+.. ...+. .++..|.+.
T Consensus 211 ~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~---l~GH~-~~V~~V~~~ 286 (460)
T KOG0285|consen 211 AGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHV---LSGHT-NPVASVMCQ 286 (460)
T ss_pred ecCCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEE---ecCCC-CcceeEEee
Confidence 45689999999999999999999999999999999999999999999999999998655541 11121 456677888
Q ss_pred cCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 83 ESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|.+..+ ++| +.|++|++||++
T Consensus 287 ~~dpqv-it~-------S~D~tvrlWDl~ 307 (460)
T KOG0285|consen 287 PTDPQV-ITG-------SHDSTVRLWDLR 307 (460)
T ss_pred cCCCce-EEe-------cCCceEEEeeec
Confidence 877776 555 899999999985
No 44
>KOG0772|consensus
Probab=99.63 E-value=7e-16 Score=99.35 Aligned_cols=101 Identities=16% Similarity=0.242 Sum_probs=73.5
Q ss_pred cccccCeeeecCCCCc-eeeeeee-----cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeec--
Q psy8803 2 KSWYEEYKRLDYHTPI-VETEVLT-----QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSW-- 73 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~-~~~~~~~-----~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~-- 73 (111)
|+++||++||||.+.- +....++ +-.-.+..++|++|+.+||+|+.||.|.+|+...... .....+.....
T Consensus 286 T~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v-~p~~~vk~AH~~g 364 (641)
T KOG0772|consen 286 TCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTV-RPVMKVKDAHLPG 364 (641)
T ss_pred EecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCccc-ccceEeeeccCCC
Confidence 6789999999999754 3333333 2234677899999999999999999999999864211 10012222222
Q ss_pred CceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 74 KYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 74 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
..+++++|++++++|+. ++.|+++++||||
T Consensus 365 ~~Itsi~FS~dg~~LlS--------Rg~D~tLKvWDLr 394 (641)
T KOG0772|consen 365 QDITSISFSYDGNYLLS--------RGFDDTLKVWDLR 394 (641)
T ss_pred CceeEEEeccccchhhh--------ccCCCceeeeecc
Confidence 25678999999999876 5789999999986
No 45
>KOG0284|consensus
Probab=99.63 E-value=9e-16 Score=96.31 Aligned_cols=95 Identities=20% Similarity=0.232 Sum_probs=81.1
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee----eecceeeeecCce
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK----YSHDMKTFSWKYT 76 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~~~~~~~~ 76 (111)
++.+.||+|+|||....++...|.||.-.|.+++|+|...+|++++.|..+++||.+++.++. |... +
T Consensus 196 ~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKnt--------V 267 (464)
T KOG0284|consen 196 LTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNT--------V 267 (464)
T ss_pred EEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccce--------E
Confidence 356899999999999888888899999999999999999999999999999999999987664 3333 3
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
..+.|+|.++.| .++ +.|..++++|+|
T Consensus 268 l~~~f~~n~N~L-lt~-------skD~~~kv~DiR 294 (464)
T KOG0284|consen 268 LAVKFNPNGNWL-LTG-------SKDQSCKVFDIR 294 (464)
T ss_pred EEEEEcCCCCee-EEc-------cCCceEEEEehh
Confidence 456788898766 555 899999999986
No 46
>KOG0269|consensus
Probab=99.63 E-value=9.4e-16 Score=102.21 Aligned_cols=93 Identities=13% Similarity=0.266 Sum_probs=76.9
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCcee-----eeecceeeeecCc
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKV-----KYSHDMKTFSWKY 75 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~-----~~~~~~~~~~~~~ 75 (111)
+++.||+|++||++..+....+.+....|+.+.|+|. +..|+++.+.|.+.+||++..... .|.+.
T Consensus 151 SGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~Gp-------- 222 (839)
T KOG0269|consen 151 SGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGP-------- 222 (839)
T ss_pred ecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCc--------
Confidence 6789999999999999988889888899999999994 899999999999999999975332 24444
Q ss_pred eeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 76 TQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+.++.|+|+... +++| ++|++|+|||+
T Consensus 223 V~c~nwhPnr~~-lATG-------GRDK~vkiWd~ 249 (839)
T KOG0269|consen 223 VLCLNWHPNREW-LATG-------GRDKMVKIWDM 249 (839)
T ss_pred eEEEeecCCCce-eeec-------CCCccEEEEec
Confidence 445556775555 5777 79999999997
No 47
>KOG0275|consensus
Probab=99.63 E-value=3e-16 Score=96.69 Aligned_cols=99 Identities=15% Similarity=0.166 Sum_probs=85.8
Q ss_pred CcccccCeeeecCCCCceeeeeee-cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLT-QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
|+++.||.|++|-+.+|.++.+|. +|+..|.|+.|+.|+..+++++-|.++++-.++++++.+ +.+... +.++..
T Consensus 279 AsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LK---EfrGHs-Syvn~a 354 (508)
T KOG0275|consen 279 ASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLK---EFRGHS-SYVNEA 354 (508)
T ss_pred hccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHH---HhcCcc-ccccce
Confidence 678999999999999999999997 899999999999999999999999999999999988776 233333 567778
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.|.+++.+++. + +.|++|++|+.+
T Consensus 355 ~ft~dG~~iis-a-------SsDgtvkvW~~K 378 (508)
T KOG0275|consen 355 TFTDDGHHIIS-A-------SSDGTVKVWHGK 378 (508)
T ss_pred EEcCCCCeEEE-e-------cCCccEEEecCc
Confidence 89999988765 3 789999999863
No 48
>KOG0284|consensus
Probab=99.62 E-value=6.9e-16 Score=96.81 Aligned_cols=95 Identities=20% Similarity=0.268 Sum_probs=81.2
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCcee----eeecceeeeecCce
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKV----KYSHDMKTFSWKYT 76 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~----~~~~~~~~~~~~~~ 76 (111)
|+++.|..|++||.+++.++.++.+|...|..+.|.+++++|+++|.|..++++|++..+.+ .|...+.++.
T Consensus 238 asgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~---- 313 (464)
T KOG0284|consen 238 ASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLT---- 313 (464)
T ss_pred EEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeec----
Confidence 56788999999999999999999999999999999999999999999999999999953322 2555555555
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
++|-...|+++| +.|+.|.+|.+
T Consensus 314 ----WhP~~~~lftsg-------g~Dgsvvh~~v 336 (464)
T KOG0284|consen 314 ----WHPLNESLFTSG-------GSDGSVVHWVV 336 (464)
T ss_pred ----cccccccceeec-------cCCCceEEEec
Confidence 467777888998 89999999975
No 49
>KOG0277|consensus
Probab=99.62 E-value=1.1e-15 Score=91.22 Aligned_cols=100 Identities=15% Similarity=0.151 Sum_probs=79.1
Q ss_pred CcccccCeeeecCCCC-ceeeeeeecccccEEEEEEcC-CCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceee
Q psy8803 1 KKSWYEEYKRLDYHTP-IVETEVLTQHTHQVLHVSFSH-NGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQY 78 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~v~~i~~s~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (111)
|+.+.|+++++||++. |+.+. ++.|+.++.++.|+. +.+.+++++.|+.|+.||++..+.... ..+... -.++.
T Consensus 164 as~Sgd~~l~lwdvr~~gk~~~-i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~--eL~gh~-~AVRk 239 (311)
T KOG0277|consen 164 ASASGDGTLRLWDVRSPGKFMS-IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLF--ELNGHG-LAVRK 239 (311)
T ss_pred EEccCCceEEEEEecCCCceeE-EEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccce--eecCCc-eEEEE
Confidence 4578899999999974 56555 899999999999988 688999999999999999987543211 122222 24567
Q ss_pred EEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 79 SQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|+|....+++++ +.|=+++|||..
T Consensus 240 vk~Sph~~~lLaSa-------sYDmT~riw~~~ 265 (311)
T KOG0277|consen 240 VKFSPHHASLLASA-------SYDMTVRIWDPE 265 (311)
T ss_pred EecCcchhhHhhhc-------cccceEEecccc
Confidence 78899888888888 999999999963
No 50
>KOG0281|consensus
Probab=99.62 E-value=1.5e-15 Score=94.30 Aligned_cols=90 Identities=18% Similarity=0.293 Sum_probs=74.0
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee----eecceeeeecCcee
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK----YSHDMKTFSWKYTQ 77 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~~~~~~~~~ 77 (111)
++.-|.+|+|||.++..+...+.||++.|.|+.|. .+.|++|+.|.++++||.++++... |...+..+.+
T Consensus 212 SGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf---- 285 (499)
T KOG0281|consen 212 SGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRF---- 285 (499)
T ss_pred cccccCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEE----
Confidence 57789999999999999999999999999999994 6699999999999999999976553 5555555543
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+ ..++ +++ +.|++|++|||.
T Consensus 286 ----~--ng~m-vtc-------SkDrsiaVWdm~ 305 (499)
T KOG0281|consen 286 ----S--NGYM-VTC-------SKDRSIAVWDMA 305 (499)
T ss_pred ----e--CCEE-EEe-------cCCceeEEEecc
Confidence 2 3344 555 899999999973
No 51
>KOG0645|consensus
Probab=99.62 E-value=1.3e-14 Score=87.14 Aligned_cols=104 Identities=19% Similarity=0.309 Sum_probs=79.6
Q ss_pred CcccccCeeeecCCCCc---eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecC---
Q psy8803 1 KKSWYEEYKRLDYHTPI---VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWK--- 74 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~---~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~--- 74 (111)
++.+||.+|++|....+ +++..|.+|+..|.++.|++.|+-|+++++|++++||.........|+..+..+.|.
T Consensus 166 ~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~~~~~~sr~~Y~v~W~~~~ 245 (312)
T KOG0645|consen 166 FSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTDLSGMHSRALYDVPWDNGV 245 (312)
T ss_pred EEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccCcchhcccceEeeeecccc
Confidence 46799999999998733 789999999999999999999999999999999999985442222222222222221
Q ss_pred ------------------------------------ceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 75 ------------------------------------YTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 75 ------------------------------------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
-+++|+++|....+++++ +.||.|++|.++
T Consensus 246 IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~-------~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 246 IASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASG-------GDDGIVNFWELE 311 (312)
T ss_pred eEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeec-------CCCceEEEEEec
Confidence 247899999666667777 889999999874
No 52
>KOG0281|consensus
Probab=99.61 E-value=6.5e-16 Score=95.83 Aligned_cols=90 Identities=17% Similarity=0.271 Sum_probs=76.3
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee----eecceeeeecCcee
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK----YSHDMKTFSWKYTQ 77 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~~~~~~~~~ 77 (111)
+.+.|.++++|++.+++.+..+.+|...|-|+.+ .++++++|+.|.+|++||++.+.++. |..-++++.+
T Consensus 335 sASgDRTikvW~~st~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRF---- 408 (499)
T KOG0281|consen 335 SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---- 408 (499)
T ss_pred EecCCceEEEEeccceeeehhhhcccccceehhc--cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheee----
Confidence 5788999999999999999999999999999877 59999999999999999999876543 6556666654
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+... +++| ..||+|+|||++
T Consensus 409 ------d~kr-IVSG-------aYDGkikvWdl~ 428 (499)
T KOG0281|consen 409 ------DNKR-IVSG-------AYDGKIKVWDLQ 428 (499)
T ss_pred ------cCce-eeec-------cccceEEEEecc
Confidence 4445 4777 899999999974
No 53
>KOG0310|consensus
Probab=99.61 E-value=9.9e-15 Score=93.09 Aligned_cols=95 Identities=17% Similarity=0.155 Sum_probs=76.1
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCc-eeeeecceeeeecCceeeE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPS-KVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~~~v 79 (111)
+++.|+.+++||+.+...+..+.+|+..|.|.+|+|. +.++++||.||+|++||++... ... +..+ -.|+..+
T Consensus 128 s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~---elnh--g~pVe~v 202 (487)
T KOG0310|consen 128 SGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVV---ELNH--GCPVESV 202 (487)
T ss_pred ecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeE---EecC--CCceeeE
Confidence 5678899999999988766688999999999999995 6799999999999999998752 222 1111 1456678
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.|-|.+..++.+| .+.|+|||+
T Consensus 203 l~lpsgs~iasAg---------Gn~vkVWDl 224 (487)
T KOG0310|consen 203 LALPSGSLIASAG---------GNSVKVWDL 224 (487)
T ss_pred EEcCCCCEEEEcC---------CCeEEEEEe
Confidence 8888988887754 778999997
No 54
>KOG0319|consensus
Probab=99.61 E-value=4.2e-15 Score=98.68 Aligned_cols=93 Identities=18% Similarity=0.253 Sum_probs=81.2
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee----eecceeeeecCce
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK----YSHDMKTFSWKYT 76 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~~~~~~~~ 76 (111)
||++.|.||+||.+.+..++.+|+||+..|..+.|-.++..|++++.||.+++|++++..+.. |..+++.+.-
T Consensus 521 aT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~--- 597 (775)
T KOG0319|consen 521 ATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSV--- 597 (775)
T ss_pred EeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEee---
Confidence 688999999999999999999999999999999999999999999999999999999987664 7777876653
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEee
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
++... ++++| +.|+.|.+|.
T Consensus 598 -----~~~~~-~~~tg-------g~Dg~i~~wk 617 (775)
T KOG0319|consen 598 -----SPLLD-MFVTG-------GGDGRIIFWK 617 (775)
T ss_pred -----cCccc-eeEec-------CCCeEEEEee
Confidence 44444 66777 8899999994
No 55
>KOG0282|consensus
Probab=99.59 E-value=6.5e-15 Score=93.95 Aligned_cols=97 Identities=10% Similarity=0.074 Sum_probs=77.9
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCC-cEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNG-RYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++|+++++||.++|+++.+|. ....+.|+.|.||+ +.+++|+.|++|+.||+++++.++. ......+++.+.
T Consensus 275 S~sfD~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqe----Yd~hLg~i~~i~ 349 (503)
T KOG0282|consen 275 SASFDRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQE----YDRHLGAILDIT 349 (503)
T ss_pred eeecceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHH----HHhhhhheeeeE
Confidence 67899999999999999999886 45678899999987 8899999999999999999876541 111124555677
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|-+.+..++. . +.|+.++||+.+
T Consensus 350 F~~~g~rFis-s-------SDdks~riWe~~ 372 (503)
T KOG0282|consen 350 FVDEGRRFIS-S-------SDDKSVRIWENR 372 (503)
T ss_pred EccCCceEee-e-------ccCccEEEEEcC
Confidence 8888888755 3 788999999864
No 56
>KOG0278|consensus
Probab=99.59 E-value=2e-14 Score=85.87 Aligned_cols=96 Identities=19% Similarity=0.259 Sum_probs=68.4
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCC----------------------
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYP---------------------- 59 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~---------------------- 59 (111)
+|.+|++||+||.+++..+..+. ....|..+..+++|++|.++- .+.|++||..+.
T Consensus 160 SSadd~tVRLWD~rTgt~v~sL~-~~s~VtSlEvs~dG~ilTia~-gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~ 237 (334)
T KOG0278|consen 160 SSADDKTVRLWDHRTGTEVQSLE-FNSPVTSLEVSQDGRILTIAY-GSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKE 237 (334)
T ss_pred eeccCCceEEEEeccCcEEEEEe-cCCCCcceeeccCCCEEEEec-CceeEEeccccccceeeccCccccccccccCCCc
Confidence 46899999999999998888876 455667777777777665443 356677766542
Q ss_pred -------------------ceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 60 -------------------SKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 60 -------------------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.... .-+...++|+.+|.|+|++... ++| +.||+|++|.+
T Consensus 238 ~fVaGged~~~~kfDy~TgeEi~---~~nkgh~gpVhcVrFSPdGE~y-AsG-------SEDGTirlWQt 296 (334)
T KOG0278|consen 238 FFVAGGEDFKVYKFDYNTGEEIG---SYNKGHFGPVHCVRFSPDGELY-ASG-------SEDGTIRLWQT 296 (334)
T ss_pred eEEecCcceEEEEEeccCCceee---ecccCCCCceEEEEECCCCcee-ecc-------CCCceEEEEEe
Confidence 2111 1122344688899999999775 777 99999999975
No 57
>KOG0294|consensus
Probab=99.58 E-value=2e-14 Score=87.96 Aligned_cols=98 Identities=15% Similarity=0.161 Sum_probs=79.7
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCC--cEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceee
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNG--RYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQY 78 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~--~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (111)
|+++.|.+|+|||.+....+..+..|.+.|.++.|.+.- .+|++|++||.|.+|+.....+.. ...... ..++.
T Consensus 57 aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~---slK~H~-~~Vt~ 132 (362)
T KOG0294|consen 57 ASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLK---SLKAHK-GQVTD 132 (362)
T ss_pred eccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEee---eecccc-cccce
Confidence 578999999999999999899999999999999999875 489999999999999998876555 222222 23566
Q ss_pred EEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 79 SQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
++-+|.+...+.. ++|+.++.|||
T Consensus 133 lsiHPS~KLALsV--------g~D~~lr~WNL 156 (362)
T KOG0294|consen 133 LSIHPSGKLALSV--------GGDQVLRTWNL 156 (362)
T ss_pred eEecCCCceEEEE--------cCCceeeeehh
Confidence 7778887665554 57999999996
No 58
>KOG0300|consensus
Probab=99.56 E-value=1.5e-14 Score=89.11 Aligned_cols=98 Identities=20% Similarity=0.210 Sum_probs=77.9
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
+.+||.+-.+||+++++.+..|.||...+..++-+|..+++++++.|.+.++||++...... .+....-..++++.|
T Consensus 289 TaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV---~VFQGHtdtVTS~vF 365 (481)
T KOG0300|consen 289 TASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSV---AVFQGHTDTVTSVVF 365 (481)
T ss_pred eeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhccee---eeecccccceeEEEE
Confidence 67999999999999999999999999999999999999999999999999999998421111 111111134456677
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+.++.. ++| +.|.+|+|||||
T Consensus 366 ~~dd~v--VSg-------SDDrTvKvWdLr 386 (481)
T KOG0300|consen 366 NTDDRV--VSG-------SDDRTVKVWDLR 386 (481)
T ss_pred ecCCce--eec-------CCCceEEEeeec
Confidence 766543 666 899999999986
No 59
>KOG1034|consensus
Probab=99.56 E-value=2.6e-14 Score=87.94 Aligned_cols=101 Identities=12% Similarity=0.099 Sum_probs=83.0
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
.+++-|.|+|.|+.+++....+.+|...|..+.++|+ -+++++++.|..+++|++++..++...+.+-++. ..+.++.
T Consensus 110 ~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHr-deVLSvD 188 (385)
T KOG1034|consen 110 AGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHR-DEVLSVD 188 (385)
T ss_pred eecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEeccccccc-CcEEEEE
Confidence 4568899999999999999999999999999999997 5899999999999999999987765333333332 3456778
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|++++..+ +++ +.|..|.+|++.
T Consensus 189 ~~~~gd~i-~Sc-------GmDhslk~W~l~ 211 (385)
T KOG1034|consen 189 FSLDGDRI-ASC-------GMDHSLKLWRLN 211 (385)
T ss_pred EcCCCCee-ecc-------CCcceEEEEecC
Confidence 89999876 455 689999999974
No 60
>KOG0291|consensus
Probab=99.56 E-value=3e-14 Score=95.23 Aligned_cols=95 Identities=17% Similarity=0.199 Sum_probs=77.7
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
.-|.+-+|+-.+...+.+.++|...+.+++++|||+.+++|++|++++|||...+.+...... +. +.++.+.|+..
T Consensus 328 klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFte---Ht-s~Vt~v~f~~~ 403 (893)
T KOG0291|consen 328 KLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTE---HT-SGVTAVQFTAR 403 (893)
T ss_pred ccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEecc---CC-CceEEEEEEec
Confidence 347899999998888888899999999999999999999999999999999998877652111 11 34556778888
Q ss_pred CCEEEEeccccCCccccCceEEEeecC
Q psy8803 85 DTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+..++. . +-||+|+.||+.
T Consensus 404 g~~lls-s-------SLDGtVRAwDlk 422 (893)
T KOG0291|consen 404 GNVLLS-S-------SLDGTVRAWDLK 422 (893)
T ss_pred CCEEEE-e-------ecCCeEEeeeec
Confidence 877755 3 789999999974
No 61
>KOG1446|consensus
Probab=99.56 E-value=6.9e-14 Score=85.28 Aligned_cols=96 Identities=14% Similarity=0.133 Sum_probs=76.8
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
++..|.+||..++.+++.++-|.||...|..++.+|-+..+++++.|+++++||++...+.+. +.. .....+||
T Consensus 75 Stk~d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~---l~~---~~~pi~Af 148 (311)
T KOG1446|consen 75 STKEDDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGL---LNL---SGRPIAAF 148 (311)
T ss_pred cCCCCCceEEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceE---Eec---CCCcceeE
Confidence 456799999999999999999999999999999999999999999999999999997666542 110 11224688
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.|++-.+ +++ .....|+++|+|
T Consensus 149 Dp~GLif-A~~-------~~~~~IkLyD~R 170 (311)
T KOG1446|consen 149 DPEGLIF-ALA-------NGSELIKLYDLR 170 (311)
T ss_pred CCCCcEE-EEe-------cCCCeEEEEEec
Confidence 8888655 444 444489999986
No 62
>KOG0313|consensus
Probab=99.55 E-value=4.6e-14 Score=88.06 Aligned_cols=92 Identities=18% Similarity=0.252 Sum_probs=75.9
Q ss_pred CcccccCeeeecCCCCc---eeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCc-ee----eeecceeee
Q psy8803 1 KKSWYEEYKRLDYHTPI---VETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPS-KV----KYSHDMKTF 71 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~---~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~-~~----~~~~~~~~~ 71 (111)
|+++.|.++++||.+.+ .....|.+|+..|..+.|+|. -.+|++++.|+++++||++... ++ .|..++.++
T Consensus 316 ~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~v 395 (423)
T KOG0313|consen 316 ASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSV 395 (423)
T ss_pred eecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEE
Confidence 57889999999999865 456678899999999999995 6789999999999999999865 33 377788888
Q ss_pred ecCceeeEEEccCCCEEEEeccccCCccccCceEEEee
Q psy8803 72 SWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 72 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
.|. .+ .++++| +.|++|+|+.
T Consensus 396 dW~---------~~-~~IvSG-------GaD~~l~i~~ 416 (423)
T KOG0313|consen 396 DWN---------EG-GLIVSG-------GADNKLRIFK 416 (423)
T ss_pred ecc---------CC-ceEEec-------cCcceEEEec
Confidence 884 44 455777 8899999975
No 63
>KOG0283|consensus
Probab=99.55 E-value=1.3e-14 Score=97.02 Aligned_cols=80 Identities=21% Similarity=0.412 Sum_probs=65.5
Q ss_pred eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCC
Q psy8803 18 VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGT 97 (111)
Q Consensus 18 ~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 97 (111)
+++..|.||.+.|..+.||. .++|++++.|+++++|++....++. +..+. ..+++|+|+|-+..++.+|
T Consensus 360 kP~~ef~GHt~DILDlSWSK-n~fLLSSSMDKTVRLWh~~~~~CL~----~F~Hn-dfVTcVaFnPvDDryFiSG----- 428 (712)
T KOG0283|consen 360 KPFCEFKGHTADILDLSWSK-NNFLLSSSMDKTVRLWHPGRKECLK----VFSHN-DFVTCVAFNPVDDRYFISG----- 428 (712)
T ss_pred cchhhhhccchhheeccccc-CCeeEeccccccEEeecCCCcceee----EEecC-CeeEEEEecccCCCcEeec-----
Confidence 34566678999999999986 6678899999999999998776665 33332 5788999999776777888
Q ss_pred ccccCceEEEeec
Q psy8803 98 PQSTSGEIAVFSL 110 (111)
Q Consensus 98 ~~~~~~~i~iw~~ 110 (111)
+-|++|+||++
T Consensus 429 --SLD~KvRiWsI 439 (712)
T KOG0283|consen 429 --SLDGKVRLWSI 439 (712)
T ss_pred --ccccceEEeec
Confidence 99999999986
No 64
>KOG1407|consensus
Probab=99.55 E-value=3.9e-14 Score=84.93 Aligned_cols=94 Identities=18% Similarity=0.307 Sum_probs=80.1
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
..|+|.|..+...+++..+++|.....||.|+|+|++|++|+.|..+.+||+....+.. .+..+.| |+.++.|+-+
T Consensus 167 GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R---~isRldw-pVRTlSFS~d 242 (313)
T KOG1407|consen 167 GLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICER---CISRLDW-PVRTLSFSHD 242 (313)
T ss_pred CCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhhe---eeccccC-ceEEEEeccC
Confidence 45889999999899999999999999999999999999999999999999998766665 3566666 7888889988
Q ss_pred CCEEEEeccccCCccccCceEEEeec
Q psy8803 85 DTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+.+| +++ +.|..|-|-++
T Consensus 243 g~~l-ASa-------SEDh~IDIA~v 260 (313)
T KOG1407|consen 243 GRML-ASA-------SEDHFIDIAEV 260 (313)
T ss_pred ccee-ecc-------CccceEEeEec
Confidence 7665 677 88888877654
No 65
>KOG1332|consensus
Probab=99.55 E-value=5.6e-14 Score=83.62 Aligned_cols=100 Identities=22% Similarity=0.345 Sum_probs=75.2
Q ss_pred CcccccCeeeecCCCCc---eeeeeeecccccEEEEEEcC--CCcEEEEEeCCCeEEEEecCCCceee-eecceeeeecC
Q psy8803 1 KKSWYEEYKRLDYHTPI---VETEVLTQHTHQVLHVSFSH--NGRYFATCSKDGYILVWTSSYPSKVK-YSHDMKTFSWK 74 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~---~~~~~~~~~~~~v~~i~~s~--~~~~l~s~~~d~~i~iw~~~~~~~~~-~~~~~~~~~~~ 74 (111)
||.+.|++|+|+..+.+ +++..|.||.++|..+.|.+ -|.+|++++.|+++.||...+++=.+ + .-..+. .
T Consensus 27 ATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~--e~~~h~-~ 103 (299)
T KOG1332|consen 27 ATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAY--EHAAHS-A 103 (299)
T ss_pred eeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhh--hhhhhc-c
Confidence 57899999999999864 56788899999999999955 59999999999999999988752111 1 011111 3
Q ss_pred ceeeEEEccCCC-EEEEeccccCCccccCceEEEeec
Q psy8803 75 YTQYSQFNESDT-LLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 75 ~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.+++|+|.|.+. .+++++ +.||.|.|.+.
T Consensus 104 SVNsV~wapheygl~Laca-------sSDG~vsvl~~ 133 (299)
T KOG1332|consen 104 SVNSVAWAPHEYGLLLACA-------SSDGKVSVLTY 133 (299)
T ss_pred cceeecccccccceEEEEe-------eCCCcEEEEEE
Confidence 455667777655 556666 88999999865
No 66
>KOG0318|consensus
Probab=99.55 E-value=1.8e-13 Score=88.45 Aligned_cols=102 Identities=19% Similarity=0.214 Sum_probs=79.3
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
+|.+.|++|-+|+=.+=+-...+..|...|.|+.|+|||..+++.+.|+++.+||=.+++.......-..+. ..+..++
T Consensus 164 ~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHk-GsIfals 242 (603)
T KOG0318|consen 164 ATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHK-GSIFALS 242 (603)
T ss_pred EeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCcc-ccEEEEE
Confidence 477889999999866667777778899999999999999999999999999999988876655222111111 2344566
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|+...++++ +.|.+++|||+.
T Consensus 243 WsPDs~~~~T~--------SaDkt~KIWdVs 265 (603)
T KOG0318|consen 243 WSPDSTQFLTV--------SADKTIKIWDVS 265 (603)
T ss_pred ECCCCceEEEe--------cCCceEEEEEee
Confidence 78899888664 679999999973
No 67
>KOG0310|consensus
Probab=99.54 E-value=3.9e-14 Score=90.43 Aligned_cols=99 Identities=15% Similarity=0.210 Sum_probs=79.4
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
.+.-.|+|+++|+.+...+..+.+|+.++..+.|+|+ +.++++|++|+.+++||+.+..... .+.... .++.+.+
T Consensus 85 aGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~---~l~~ht-DYVR~g~ 160 (487)
T KOG0310|consen 85 AGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQA---ELSGHT-DYVRCGD 160 (487)
T ss_pred ccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEE---EecCCc-ceeEeec
Confidence 4556789999998877778888999999999999996 6788889999999999998765421 122222 3555666
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
++|...+++++| +.|+.|++||.|
T Consensus 161 ~~~~~~hivvtG-------sYDg~vrl~DtR 184 (487)
T KOG0310|consen 161 ISPANDHIVVTG-------SYDGKVRLWDTR 184 (487)
T ss_pred cccCCCeEEEec-------CCCceEEEEEec
Confidence 788888999999 999999999986
No 68
>KOG0305|consensus
Probab=99.53 E-value=2.1e-13 Score=88.70 Aligned_cols=102 Identities=13% Similarity=0.210 Sum_probs=77.5
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCC-CcEEEEEe--CCCeEEEEecCCCceee---eecceeeeecC
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHN-GRYFATCS--KDGYILVWTSSYPSKVK---YSHDMKTFSWK 74 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~--~d~~i~iw~~~~~~~~~---~~~~~~~~~~~ 74 (111)
|++..|..+.|||....+++..+..|...|.+++|+|- ..+||+|+ .|++|++||..++..+. ....|..+.|+
T Consensus 317 ASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Ws 396 (484)
T KOG0305|consen 317 ASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIWS 396 (484)
T ss_pred ccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCCceeeEEEc
Confidence 68899999999999888889999999999999999995 77888874 69999999998754332 11112222222
Q ss_pred ------------------------------------ceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 75 ------------------------------------YTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 75 ------------------------------------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.+..++.+|++..+++ | +.|.++++|++
T Consensus 397 k~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t-~-------a~DETlrfw~~ 460 (484)
T KOG0305|consen 397 KKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVT-G-------AADETLRFWNL 460 (484)
T ss_pred CCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEE-e-------cccCcEEeccc
Confidence 2356789999888744 4 67888999985
No 69
>KOG0316|consensus
Probab=99.53 E-value=1.5e-13 Score=81.58 Aligned_cols=93 Identities=15% Similarity=0.188 Sum_probs=73.5
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCc--eee----eecceeeeecC
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPS--KVK----YSHDMKTFSWK 74 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~--~~~----~~~~~~~~~~~ 74 (111)
|+..-|..|.+||+.+|+...+|.+|.+.|..+.|..+...+++|+-|.++++||.++.. +.+ ....+..+.
T Consensus 75 ~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~-- 152 (307)
T KOG0316|consen 75 ASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSID-- 152 (307)
T ss_pred ccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEE--
Confidence 456779999999999999999999999999999999999999999999999999998743 222 111222222
Q ss_pred ceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 75 YTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
-..+.+++| +.||+++.||+|
T Consensus 153 ---------v~~heIvaG-------S~DGtvRtydiR 173 (307)
T KOG0316|consen 153 ---------VAEHEIVAG-------SVDGTVRTYDIR 173 (307)
T ss_pred ---------ecccEEEee-------ccCCcEEEEEee
Confidence 123445666 889999999986
No 70
>KOG0265|consensus
Probab=99.53 E-value=7.5e-14 Score=84.94 Aligned_cols=98 Identities=12% Similarity=0.087 Sum_probs=79.4
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++.|+++++||++++..+..++ ....+.++.|..++..+.+|+-|..|++||++.....+. .... -.+++.+.
T Consensus 149 ~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~---lsGh-~DtIt~ls 223 (338)
T KOG0265|consen 149 CSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYT---LSGH-ADTITGLS 223 (338)
T ss_pred EecCCCceEEEEeecccchhhccc-cceeEEEEEecccccceeeccccCceeeeccccCcceEE---eecc-cCceeeEE
Confidence 367899999999999998888775 567889999999999999999999999999987765552 1111 25666777
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.+|.+..++. .+.|.++++||+|
T Consensus 224 ls~~gs~lls--------nsMd~tvrvwd~r 246 (338)
T KOG0265|consen 224 LSRYGSFLLS--------NSMDNTVRVWDVR 246 (338)
T ss_pred eccCCCcccc--------ccccceEEEEEec
Confidence 8888887755 3899999999986
No 71
>KOG2110|consensus
Probab=99.53 E-value=6.8e-13 Score=82.65 Aligned_cols=99 Identities=19% Similarity=0.179 Sum_probs=79.6
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCe-EEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGY-ILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~-i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
+..-|.|.+||..+.++...+..|.+.+-+++|+++|.+||++++.|+ |+|+.+.+++...... +......+.+++|
T Consensus 149 s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFR--RG~~~~~IySL~F 226 (391)
T KOG2110|consen 149 STTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFR--RGTYPVSIYSLSF 226 (391)
T ss_pred CCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeee--CCceeeEEEEEEE
Confidence 445688999999999999999999999999999999999999999887 7899998887665311 1111234668899
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|+...|.++ +..++|+|+.+.
T Consensus 227 s~ds~~L~~s--------S~TeTVHiFKL~ 248 (391)
T KOG2110|consen 227 SPDSQFLAAS--------SNTETVHIFKLE 248 (391)
T ss_pred CCCCCeEEEe--------cCCCeEEEEEec
Confidence 9999877654 567889999763
No 72
>KOG0302|consensus
Probab=99.52 E-value=7e-14 Score=87.34 Aligned_cols=90 Identities=28% Similarity=0.459 Sum_probs=68.3
Q ss_pred cCeeeecCCCCce---eeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCc---ee---eeecceeeeecCc
Q psy8803 6 EEYKRLDYHTPIV---ETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPS---KV---KYSHDMKTFSWKY 75 (111)
Q Consensus 6 d~~i~iw~~~~~~---~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~---~~---~~~~~~~~~~~~~ 75 (111)
-+.|++|...++. -..-|.+|+..|-.++|||. ...|++|+.|++|+|||++... ++ .|...++.+.|
T Consensus 233 ~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISW-- 310 (440)
T KOG0302|consen 233 VKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISW-- 310 (440)
T ss_pred ccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEc--
Confidence 3467888887662 23345679999999999995 7899999999999999999762 22 25555555555
Q ss_pred eeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 76 TQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+.... ++++| +.+|+++|||||
T Consensus 311 ------nr~~~-lLasG-------~DdGt~~iwDLR 332 (440)
T KOG0302|consen 311 ------NRREP-LLASG-------GDDGTLSIWDLR 332 (440)
T ss_pred ------cCCcc-eeeec-------CCCceEEEEEhh
Confidence 54444 78998 899999999997
No 73
>KOG0268|consensus
Probab=99.51 E-value=1.1e-13 Score=86.16 Aligned_cols=102 Identities=16% Similarity=0.242 Sum_probs=82.6
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCc--------------------
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPS-------------------- 60 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~-------------------- 60 (111)
|+++.||.|+|||+.+.+++..|+.|.+.|..+++.. .-++++++|++++.|-+....
T Consensus 83 aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~~p~~tilg~s~~~gIdh~~~~~ 160 (433)
T KOG0268|consen 83 ASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDGPPLHTILGKSVYLGIDHHRKNS 160 (433)
T ss_pred hccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeeccCCcceeeeccccccccccccccc
Confidence 5789999999999999999999999999999999976 778899999999999854310
Q ss_pred ------------eeeeecceeeeecCc--eeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 61 ------------KVKYSHDMKTFSWKY--TQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 61 ------------~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
-.....++....|.. +.++.|+|....+++++ ..|+.|.++|+|
T Consensus 161 ~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~-------~sDrsIvLyD~R 218 (433)
T KOG0268|consen 161 VFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASC-------ASDRSIVLYDLR 218 (433)
T ss_pred cccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeee-------ccCCceEEEecc
Confidence 000222445556654 47889999999998988 789999999986
No 74
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.50 E-value=9e-13 Score=79.73 Aligned_cols=97 Identities=24% Similarity=0.241 Sum_probs=76.9
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEc
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFN 82 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 82 (111)
+..|+.+.+||+.+++....+..|...+.++.|+|++.++++++.++.+++||++....... .. ..-.++..++|+
T Consensus 111 ~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~---~~-~~~~~i~~~~~~ 186 (289)
T cd00200 111 SSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVAT---LT-GHTGEVNSVAFS 186 (289)
T ss_pred ecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEcccccccee---Ee-cCccccceEEEC
Confidence 44599999999998888888888999999999999999999988899999999986554331 11 111356678889
Q ss_pred cCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 83 ESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|++..+++++ .++.|++||++
T Consensus 187 ~~~~~l~~~~--------~~~~i~i~d~~ 207 (289)
T cd00200 187 PDGEKLLSSS--------SDGTIKLWDLS 207 (289)
T ss_pred CCcCEEEEec--------CCCcEEEEECC
Confidence 9887776654 48899999974
No 75
>KOG0274|consensus
Probab=99.50 E-value=2.8e-13 Score=89.93 Aligned_cols=90 Identities=21% Similarity=0.179 Sum_probs=73.1
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee----eecceeeeecCceee
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK----YSHDMKTFSWKYTQY 78 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~~~~~~~~~~ 78 (111)
++.|.+|++|++.++..+..+.+|...|.++... +.++++|+.|++|++|++...+++. |...+ .+
T Consensus 307 gs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V--------~s 376 (537)
T KOG0274|consen 307 GSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRV--------YS 376 (537)
T ss_pred ccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceE--------EE
Confidence 5789999999999999999999999999999886 8899999999999999999877665 33333 34
Q ss_pred EEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 79 SQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+.+.+. ..+.+| +.|+.|++||++
T Consensus 377 l~~~~~--~~~~Sg-------s~D~~IkvWdl~ 400 (537)
T KOG0274|consen 377 LIVDSE--NRLLSG-------SLDTTIKVWDLR 400 (537)
T ss_pred EEecCc--ceEEee-------eeccceEeecCC
Confidence 444443 445667 899999999985
No 76
>KOG1407|consensus
Probab=99.50 E-value=3.9e-13 Score=80.72 Aligned_cols=105 Identities=18% Similarity=0.209 Sum_probs=86.5
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
|+++-|..+.+||+....+++.+..+.-+|..++|+.||++|+++++|..|-|=+++++.... ++.+- ++..+|+
T Consensus 205 A~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~---eI~~~--~~t~tVA 279 (313)
T KOG1407|consen 205 ATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVW---EIPCE--GPTFTVA 279 (313)
T ss_pred eeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEE---Eeecc--CCceeEE
Confidence 678899999999999999999999999999999999999999999999999999998887665 24332 5677899
Q ss_pred EccCCCEEEEeccccCC-ccccCceEEEeec
Q psy8803 81 FNESDTLLLVSGVHFGT-PQSTSGEIAVFSL 110 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~~~~~~~i~iw~~ 110 (111)
|+|....|+.++++-.+ .+-..+.++++-+
T Consensus 280 WHPk~~LLAyA~ddk~~d~~reag~vKiFG~ 310 (313)
T KOG1407|consen 280 WHPKRPLLAYACDDKDGDSNREAGTVKIFGL 310 (313)
T ss_pred ecCCCceeeEEecCCCCccccccceeEEecC
Confidence 99999888887766333 2334577888754
No 77
>KOG4283|consensus
Probab=99.49 E-value=3.8e-13 Score=82.14 Aligned_cols=94 Identities=14% Similarity=0.151 Sum_probs=77.5
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCC---CcEEEEEeCCCeEEEEecCCCceee----eecceeeeecC
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHN---GRYFATCSKDGYILVWTSSYPSKVK----YSHDMKTFSWK 74 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~---~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~~~~~~ 74 (111)
+|++|.++++||.++.+....|+ ..+.|+.-+++|- ..++++|..+-.+++-|+..+...+ |...+.
T Consensus 119 ssSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vl----- 192 (397)
T KOG4283|consen 119 SSSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVL----- 192 (397)
T ss_pred cccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceE-----
Confidence 68999999999999998888887 6788999899994 3477888888899999999875443 544454
Q ss_pred ceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 75 YTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.|.|+|....++++| +.|+.|++||+|
T Consensus 193 ---aV~Wsp~~e~vLatg-------saDg~irlWDiR 219 (397)
T KOG4283|consen 193 ---AVEWSPSSEWVLATG-------SADGAIRLWDIR 219 (397)
T ss_pred ---EEEeccCceeEEEec-------CCCceEEEEEee
Confidence 455678888999999 999999999986
No 78
>KOG0293|consensus
Probab=99.49 E-value=5.3e-14 Score=88.88 Aligned_cols=97 Identities=18% Similarity=0.259 Sum_probs=75.6
Q ss_pred ccccCeeeecCCCCceeeeeeeccc--ccEEEEEEcC-CCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHT--HQVLHVSFSH-NGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~--~~v~~i~~s~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
+.-+..+++||+...+.+..+.||. ..+..-+|.- +...+++|++|++|+||+-+.+..... ...+. ..+++|
T Consensus 413 nL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~---LsGHs-~~vNcV 488 (519)
T KOG0293|consen 413 NLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAV---LSGHS-KTVNCV 488 (519)
T ss_pred EcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEe---ecCCc-ceeeEE
Confidence 4457889999999888888888885 3455556744 568999999999999999998876651 11111 455677
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+++|.+..+++++ +.||+|+||..
T Consensus 489 swNP~~p~m~ASa-------sDDgtIRIWg~ 512 (519)
T KOG0293|consen 489 SWNPADPEMFASA-------SDDGTIRIWGP 512 (519)
T ss_pred ecCCCCHHHhhcc-------CCCCeEEEecC
Confidence 7899999999999 99999999964
No 79
>KOG0289|consensus
Probab=99.49 E-value=4.8e-13 Score=84.92 Aligned_cols=88 Identities=23% Similarity=0.274 Sum_probs=71.4
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
++..|+.++|||+.+.....+|.+|++.|..++|+.+|-+|+++.+|+.+++||++..+.++. +.--...+++.+.|
T Consensus 364 tgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt---~~l~~~~~v~s~~f 440 (506)
T KOG0289|consen 364 TGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKT---IQLDEKKEVNSLSF 440 (506)
T ss_pred ccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccce---eeccccccceeEEE
Confidence 577899999999999989999999999999999999999999999999999999997654431 11111134667888
Q ss_pred ccCCCEEEEec
Q psy8803 82 NESDTLLLVSG 92 (111)
Q Consensus 82 ~~~~~~~~~~~ 92 (111)
.+.+.++...|
T Consensus 441 D~SGt~L~~~g 451 (506)
T KOG0289|consen 441 DQSGTYLGIAG 451 (506)
T ss_pred cCCCCeEEeec
Confidence 98888876643
No 80
>KOG0289|consensus
Probab=99.49 E-value=6.1e-13 Score=84.45 Aligned_cols=98 Identities=14% Similarity=0.235 Sum_probs=73.8
Q ss_pred cccccCeeeecCCCCceeeeeeec--ccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQ--HTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~--~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
.+++|++..+.|+.++..+..-.. .+=.+.+.+|+|||.+|++|..|+.+++||++...... ..... -.++..+
T Consensus 320 sAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a---~Fpgh-t~~vk~i 395 (506)
T KOG0289|consen 320 SASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVA---KFPGH-TGPVKAI 395 (506)
T ss_pred EecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccc---cCCCC-CCceeEE
Confidence 467899999999999977655442 22348899999999999999999999999998754332 11111 1456677
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|+.++.++++ + +.|+.|++||||
T Consensus 396 ~FsENGY~Lat-~-------add~~V~lwDLR 419 (506)
T KOG0289|consen 396 SFSENGYWLAT-A-------ADDGSVKLWDLR 419 (506)
T ss_pred EeccCceEEEE-E-------ecCCeEEEEEeh
Confidence 88888877655 4 578889999997
No 81
>KOG1036|consensus
Probab=99.48 E-value=2.5e-13 Score=82.81 Aligned_cols=92 Identities=14% Similarity=0.109 Sum_probs=72.1
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee---eecceeeeecCceee
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK---YSHDMKTFSWKYTQY 78 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~---~~~~~~~~~~~~~~~ 78 (111)
+++|||++++||+....+...+. |..++.+++|.+ ...+++|+.|+.++.+|+.+..... |. .++++
T Consensus 30 vssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~~igth~--------~~i~c 99 (323)
T KOG1036|consen 30 VSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNEDQIGTHD--------EGIRC 99 (323)
T ss_pred EEeccCcEEEEeccchhhhhhee-cCCceeeeeccC-CceEEEeccCceEEEEEecCCcceeeccCC--------CceEE
Confidence 57899999999999776666665 899999999986 5567889999999999999865543 43 34455
Q ss_pred EEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 79 SQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+.+.+....+ ++| ++|+.|++||.|
T Consensus 100 i~~~~~~~~v-Isg-------sWD~~ik~wD~R 124 (323)
T KOG1036|consen 100 IEYSYEVGCV-ISG-------SWDKTIKFWDPR 124 (323)
T ss_pred EEeeccCCeE-EEc-------ccCccEEEEecc
Confidence 6666655554 566 899999999976
No 82
>KOG1539|consensus
Probab=99.48 E-value=2.7e-13 Score=91.44 Aligned_cols=96 Identities=15% Similarity=0.155 Sum_probs=80.1
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
....|-.|+++|..+.+.++.|.||...|.+++|||||++|++++.|++|++||+.+....- ...+. .+...+.|
T Consensus 551 ~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID----~~~vd-~~~~sls~ 625 (910)
T KOG1539|consen 551 IALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLID----GLLVD-SPCTSLSF 625 (910)
T ss_pred hhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceee----eEecC-CcceeeEE
Confidence 45567889999999999999999999999999999999999999999999999999887664 22222 56678899
Q ss_pred ccCCCEEEEeccccCCccccCceEEEee
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
+|.+.+++++- ....-|.+|-
T Consensus 626 SPngD~LAT~H-------vd~~gIylWs 646 (910)
T KOG1539|consen 626 SPNGDFLATVH-------VDQNGIYLWS 646 (910)
T ss_pred CCCCCEEEEEE-------ecCceEEEEE
Confidence 99999998876 3445588884
No 83
>KOG1445|consensus
Probab=99.48 E-value=8.9e-14 Score=92.12 Aligned_cols=102 Identities=18% Similarity=0.229 Sum_probs=76.4
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecc-eeeeecCceeeE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHD-MKTFSWKYTQYS 79 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~-~~~~~~~~~~~v 79 (111)
|++++|-+|++||+...+....|.+|++.|..++|||||+.+++.+.|+++++|+.+..+...+... ... ...--+
T Consensus 694 a~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvg---tRgARi 770 (1012)
T KOG1445|consen 694 AVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEGKGPVG---TRGARI 770 (1012)
T ss_pred hhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccCCCCcc---CcceeE
Confidence 5789999999999999999999999999999999999999999999999999999987543321111 100 111134
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEee
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
.|.-++..++++|.+-. .++.|.+||
T Consensus 771 ~wacdgr~viv~Gfdk~----SeRQv~~Y~ 796 (1012)
T KOG1445|consen 771 LWACDGRIVIVVGFDKS----SERQVQMYD 796 (1012)
T ss_pred EEEecCcEEEEeccccc----chhhhhhhh
Confidence 45568888888874432 255566665
No 84
>KOG0274|consensus
Probab=99.48 E-value=7.1e-13 Score=88.05 Aligned_cols=92 Identities=21% Similarity=0.213 Sum_probs=74.3
Q ss_pred cccccCeeeecCCCCceeeee-eecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee----eecceeeeecCce
Q psy8803 2 KSWYEEYKRLDYHTPIVETEV-LTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK----YSHDMKTFSWKYT 76 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~-~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~~~~~~~~ 76 (111)
+++.|.++++||..++..+.. +.||.+.|.++++..-+..+++|+.|.++++||..++.+.. |...+.++.
T Consensus 223 ~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~---- 298 (537)
T KOG0274|consen 223 SGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLT---- 298 (537)
T ss_pred ecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEE----
Confidence 578899999999999988887 99999999999998888999999999999999999887765 444454443
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.....+++| +.|.+|++|+++
T Consensus 299 -------~~~~~~~sg-------s~D~tVkVW~v~ 319 (537)
T KOG0274|consen 299 -------IDPFLLVSG-------SRDNTVKVWDVT 319 (537)
T ss_pred -------ccCceEeec-------cCCceEEEEecc
Confidence 233444555 778888888764
No 85
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.48 E-value=1.2e-12 Score=79.15 Aligned_cols=98 Identities=24% Similarity=0.313 Sum_probs=76.4
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
+++.|+.+++|++..++.+..+..|...+.++.|+++++++++++.++.+.+||++....... .... -.++..++|
T Consensus 68 ~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~-~~~i~~~~~ 143 (289)
T cd00200 68 SGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTT---LRGH-TDWVNSVAF 143 (289)
T ss_pred EEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEE---eccC-CCcEEEEEE
Confidence 456799999999998888888888999999999999989999998899999999986554431 1111 135667888
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|++..+ +++ +.++.|++||++
T Consensus 144 ~~~~~~l-~~~-------~~~~~i~i~d~~ 165 (289)
T cd00200 144 SPDGTFV-ASS-------SQDGTIKLWDLR 165 (289)
T ss_pred cCcCCEE-EEE-------cCCCcEEEEEcc
Confidence 8886554 444 458899999974
No 86
>KOG0290|consensus
Probab=99.47 E-value=8.4e-13 Score=80.42 Aligned_cols=103 Identities=15% Similarity=0.187 Sum_probs=76.1
Q ss_pred cccccCeeeecCCCCcee---eeeeecccccEEEEEEcCCC-cEEEEEeCCCeEEEEecCCCc---eeee----ecceee
Q psy8803 2 KSWYEEYKRLDYHTPIVE---TEVLTQHTHQVLHVSFSHNG-RYFATCSKDGYILVWTSSYPS---KVKY----SHDMKT 70 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~---~~~~~~~~~~v~~i~~s~~~-~~l~s~~~d~~i~iw~~~~~~---~~~~----~~~~~~ 70 (111)
+|+-|.++.|||+..+.. ...|-+|.++|..++|...+ +.|++.|.||.+++||++... .+.. ..+...
T Consensus 168 tSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlR 247 (364)
T KOG0290|consen 168 TSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLR 247 (364)
T ss_pred eecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCccee
Confidence 688999999999998733 45667899999999999864 689999999999999998631 0000 001111
Q ss_pred eec-------------------------------------CceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 71 FSW-------------------------------------KYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 71 ~~~-------------------------------------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+.| ..++.++|.|....-++++ +.|..+.|||++
T Consensus 248 LswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hicta-------GDD~qaliWDl~ 318 (364)
T KOG0290|consen 248 LSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTA-------GDDCQALIWDLQ 318 (364)
T ss_pred eccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeec-------CCcceEEEEecc
Confidence 111 2357899999776666777 789999999984
No 87
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.47 E-value=8e-13 Score=91.60 Aligned_cols=97 Identities=21% Similarity=0.218 Sum_probs=71.4
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEc-CCCcEEEEEeCCCeEEEEecCCCce-eeeecceeeeecCceee
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFS-HNGRYFATCSKDGYILVWTSSYPSK-VKYSHDMKTFSWKYTQY 78 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s-~~~~~l~s~~~d~~i~iw~~~~~~~-~~~~~~~~~~~~~~~~~ 78 (111)
++++.|++|++||++++..+..+..+ ..+.++.|. +++..|++|+.|+.|++||++.... ... .... -..+..
T Consensus 592 ~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~---~~~h-~~~V~~ 666 (793)
T PLN00181 592 ASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCT---MIGH-SKTVSY 666 (793)
T ss_pred EEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceE---ecCC-CCCEEE
Confidence 46788999999999998888887754 688999995 4699999999999999999986532 110 1111 134456
Q ss_pred EEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 79 SQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
++|. ++..+ +++ +.|+.|++||++
T Consensus 667 v~f~-~~~~l-vs~-------s~D~~ikiWd~~ 690 (793)
T PLN00181 667 VRFV-DSSTL-VSS-------STDNTLKLWDLS 690 (793)
T ss_pred EEEe-CCCEE-EEE-------ECCCEEEEEeCC
Confidence 6675 45554 555 789999999974
No 88
>KOG0293|consensus
Probab=99.47 E-value=3.1e-13 Score=85.47 Aligned_cols=98 Identities=15% Similarity=0.212 Sum_probs=80.4
Q ss_pred CcccccCeeeecCCCCc---eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee-eecceeeeecCce
Q psy8803 1 KKSWYEEYKRLDYHTPI---VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK-YSHDMKTFSWKYT 76 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~---~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~-~~~~~~~~~~~~~ 76 (111)
|+++.|.+.-||++... +...++.+|...|..+.||||.+++++|+.+..+.+||..++.... +... +. ..+
T Consensus 240 AsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~---~~-~S~ 315 (519)
T KOG0293|consen 240 ASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSG---LG-FSV 315 (519)
T ss_pred eeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccC---cC-CCc
Confidence 68899999999998754 4588889999999999999999999999999999999999876554 1111 12 345
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
++++|.|++..+ ++| +.|+.|..||+
T Consensus 316 ~sc~W~pDg~~~-V~G-------s~dr~i~~wdl 341 (519)
T KOG0293|consen 316 SSCAWCPDGFRF-VTG-------SPDRTIIMWDL 341 (519)
T ss_pred ceeEEccCCcee-Eec-------CCCCcEEEecC
Confidence 678899999886 566 78899999986
No 89
>KOG0303|consensus
Probab=99.46 E-value=4.8e-13 Score=84.17 Aligned_cols=98 Identities=11% Similarity=0.065 Sum_probs=79.6
Q ss_pred CcccccCeeeecCCCCc-------eeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCceeeeecceeeee
Q psy8803 1 KKSWYEEYKRLDYHTPI-------VETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFS 72 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~-------~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~ 72 (111)
|+++-|-+|+||.+..+ +++..|.+|+..|.-+.|+|. .+.|++++.|.++.+|++.+++.+.... .
T Consensus 98 ASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-----h 172 (472)
T KOG0303|consen 98 ASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-----H 172 (472)
T ss_pred ecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC-----C
Confidence 67889999999999643 678889999999999999997 6789999999999999999987654321 1
Q ss_pred cCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 73 WKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 73 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
-.-+.++.|+-++..+++ . +.|.+|+|||.|
T Consensus 173 pd~i~S~sfn~dGs~l~T-t-------ckDKkvRv~dpr 203 (472)
T KOG0303|consen 173 PDMVYSMSFNRDGSLLCT-T-------CKDKKVRVIDPR 203 (472)
T ss_pred CCeEEEEEeccCCceeee-e-------cccceeEEEcCC
Confidence 123556788888888755 4 689999999975
No 90
>KOG0267|consensus
Probab=99.45 E-value=1.3e-13 Score=91.91 Aligned_cols=98 Identities=15% Similarity=0.234 Sum_probs=79.9
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee-eecceeeeecCceeeE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK-YSHDMKTFSWKYTQYS 79 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~-~~~~~~~~~~~~~~~v 79 (111)
|.+..||+|++||+...+.+++|.+|...+..+.|+|-+.++++++.|+-+++||.+..-+.+ +.+.. ..+..+
T Consensus 86 aagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~-----~vv~~l 160 (825)
T KOG0267|consen 86 AAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHT-----RVVDVL 160 (825)
T ss_pred cccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCc-----ceeEEE
Confidence 467889999999999999999999999999999999999999999999999999998543333 22211 234567
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|+|++.++ +.| +.|.+++|||++
T Consensus 161 ~lsP~Gr~v-~~g-------~ed~tvki~d~~ 184 (825)
T KOG0267|consen 161 RLSPDGRWV-ASG-------GEDNTVKIWDLT 184 (825)
T ss_pred eecCCCcee-ecc-------CCcceeeeeccc
Confidence 899999886 455 568999999973
No 91
>KOG0643|consensus
Probab=99.45 E-value=3.1e-12 Score=77.15 Aligned_cols=101 Identities=14% Similarity=0.097 Sum_probs=84.4
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEc
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFN 82 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 82 (111)
-..|.+..+|....|+.+.++.||++.|+|+..+-+...+++|+.|.++++||++++++..... .. .++..+.|+
T Consensus 28 caKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k-~~----~~Vk~~~F~ 102 (327)
T KOG0643|consen 28 CAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWK-TN----SPVKRVDFS 102 (327)
T ss_pred ecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEee-cC----CeeEEEeec
Confidence 3578899999998899999999999999999999999999999999999999999998776311 11 456678899
Q ss_pred cCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 83 ESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+.+..++++.+...+. .+.|.++|+|
T Consensus 103 ~~gn~~l~~tD~~mg~---~~~v~~fdi~ 128 (327)
T KOG0643|consen 103 FGGNLILASTDKQMGY---TCFVSVFDIR 128 (327)
T ss_pred cCCcEEEEEehhhcCc---ceEEEEEEcc
Confidence 9999998887666553 5678888875
No 92
>KOG0321|consensus
Probab=99.45 E-value=2.7e-13 Score=89.28 Aligned_cols=103 Identities=17% Similarity=0.124 Sum_probs=75.0
Q ss_pred cccccCeeeecCCCCceeeee--eecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCc--e---------eeeec-
Q psy8803 2 KSWYEEYKRLDYHTPIVETEV--LTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPS--K---------VKYSH- 66 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~--~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~--~---------~~~~~- 66 (111)
+.+.|.+++.||+....+... +.||++.|..++|.++ ...|++|+.|+.+.|||++... . ..|..
T Consensus 117 sasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ 196 (720)
T KOG0321|consen 117 SASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTA 196 (720)
T ss_pred EccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCC
Confidence 456799999999998887766 7899999999999995 6789999999999999997421 0 00111
Q ss_pred --------------ceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 67 --------------DMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 67 --------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
......+....++.+..++..|+.+| ..|+.|+|||||
T Consensus 197 ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSag-------a~D~~iKVWDLR 248 (720)
T KOG0321|consen 197 PTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAG-------AADSTIKVWDLR 248 (720)
T ss_pred CCCCchhhccccccccccCceeeeeEEEEEeccceeeecc-------CCCcceEEEeec
Confidence 00001111112366677888887777 679999999986
No 93
>KOG1273|consensus
Probab=99.44 E-value=7.9e-13 Score=81.34 Aligned_cols=61 Identities=18% Similarity=0.207 Sum_probs=56.0
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCce
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSK 61 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~ 61 (111)
|++..||.+-|||+.+-..-..+.+|..+|.+++||+||+.|++++.|-.|.+||+..+.+
T Consensus 39 AvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~ 99 (405)
T KOG1273|consen 39 AVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSP 99 (405)
T ss_pred eeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCc
Confidence 5788999999999998887788899999999999999999999999999999999987643
No 94
>KOG0303|consensus
Probab=99.44 E-value=1.4e-12 Score=82.11 Aligned_cols=101 Identities=17% Similarity=0.155 Sum_probs=77.0
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++.|.+|.||+..+++.+.++. |...|+.++|+.||.+|++.+.|++|+|||.+.+..+... .++.....+-+.
T Consensus 148 lsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~---~~heG~k~~Rai 223 (472)
T KOG0303|consen 148 LSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEG---VAHEGAKPARAI 223 (472)
T ss_pred hhccCCceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeec---ccccCCCcceeE
Confidence 467899999999999999998888 9999999999999999999999999999999988766521 111112222334
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
|-.++. ++++| +.. -.++.+.+||.
T Consensus 224 fl~~g~-i~tTG--fsr--~seRq~aLwdp 248 (472)
T KOG0303|consen 224 FLASGK-IFTTG--FSR--MSERQIALWDP 248 (472)
T ss_pred EeccCc-eeeec--ccc--ccccceeccCc
Confidence 444555 66766 333 34788999974
No 95
>KOG2111|consensus
Probab=99.44 E-value=3.7e-12 Score=78.18 Aligned_cols=97 Identities=18% Similarity=0.239 Sum_probs=77.9
Q ss_pred ccCeeeecCCCCcee--eeeeecccccEEEEEEcCCCcEEEEEeCCCe-EEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 5 YEEYKRLDYHTPIVE--TEVLTQHTHQVLHVSFSHNGRYFATCSKDGY-ILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~--~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~-i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
.-|.|+|-|+...+. ...+.+|.+.|.|++...+|.++|++|..|+ |+|||..++...... -+...-..+.+++|
T Consensus 157 k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~--RRG~d~A~iy~iaF 234 (346)
T KOG2111|consen 157 KTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQEL--RRGVDRADIYCIAF 234 (346)
T ss_pred ccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeee--ecCCchheEEEEEe
Confidence 458899999886654 4667899999999999999999999999987 889999998776631 12222245778999
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|+...++++ +..|+++|+.++
T Consensus 235 Sp~~s~Lavs--------SdKgTlHiF~l~ 256 (346)
T KOG2111|consen 235 SPNSSWLAVS--------SDKGTLHIFSLR 256 (346)
T ss_pred CCCccEEEEE--------cCCCeEEEEEee
Confidence 9999888764 789999999875
No 96
>KOG0305|consensus
Probab=99.43 E-value=5e-13 Score=87.00 Aligned_cols=97 Identities=15% Similarity=0.183 Sum_probs=75.9
Q ss_pred cccccCeeeecCCCCceeeee-eecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee----eecceeeeecCce
Q psy8803 2 KSWYEEYKRLDYHTPIVETEV-LTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK----YSHDMKTFSWKYT 76 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~-~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~~~~~~~~ 76 (111)
+++-|+.|..+|++..+.... +.+|...|..+.|++|++++++|+.|..+.|||........ |...+
T Consensus 275 sGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAV-------- 346 (484)
T KOG0305|consen 275 SGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAV-------- 346 (484)
T ss_pred EecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceee--------
Confidence 467799999999998765555 88999999999999999999999999999999996544333 43334
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
..++|+|-...++++| + ++.|+.|++||..
T Consensus 347 KA~awcP~q~~lLAsG---G--Gs~D~~i~fwn~~ 376 (484)
T KOG0305|consen 347 KALAWCPWQSGLLATG---G--GSADRCIKFWNTN 376 (484)
T ss_pred eEeeeCCCccCceEEc---C--CCcccEEEEEEcC
Confidence 4566678666666665 1 3679999999963
No 97
>KOG0772|consensus
Probab=99.43 E-value=5.6e-13 Score=86.27 Aligned_cols=105 Identities=17% Similarity=0.182 Sum_probs=74.0
Q ss_pred CcccccCeeeecCCCCc--eeeee-eecccc--cEEEEEEcCCCcEEEEEeCCCeEEEEecCCCcee-eeecceeeeecC
Q psy8803 1 KKSWYEEYKRLDYHTPI--VETEV-LTQHTH--QVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKV-KYSHDMKTFSWK 74 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~--~~~~~-~~~~~~--~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~-~~~~~~~~~~~~ 74 (111)
|++.-||.|++|+.... .+... -.+|.. .|.++.||+||+.|++-+.|.++++||++..... .....+.. ..
T Consensus 333 Aagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t--~~ 410 (641)
T KOG0772|consen 333 AAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPT--PF 410 (641)
T ss_pred hhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCc--cC
Confidence 56788999999998532 22222 257877 9999999999999999999999999999875433 21111111 13
Q ss_pred ceeeEEEccCCCEEEEeccccCCccccCceEEEee
Q psy8803 75 YTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
+.+.++|+|++..+ ++|...... ...+.+.++|
T Consensus 411 ~~tdc~FSPd~kli-~TGtS~~~~-~~~g~L~f~d 443 (641)
T KOG0772|consen 411 PGTDCCFSPDDKLI-LTGTSAPNG-MTAGTLFFFD 443 (641)
T ss_pred CCCccccCCCceEE-EecccccCC-CCCceEEEEe
Confidence 45678999998765 555554442 5566788876
No 98
>KOG0318|consensus
Probab=99.43 E-value=2.6e-12 Score=83.24 Aligned_cols=95 Identities=13% Similarity=0.222 Sum_probs=74.9
Q ss_pred CcccccCeeeecCCCCce--eeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee-----eecceeeeec
Q psy8803 1 KKSWYEEYKRLDYHTPIV--ETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK-----YSHDMKTFSW 73 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~-----~~~~~~~~~~ 73 (111)
|++..|+.++||.+..+. ....+..|.+.+.++++|||+.+|+++...+++.+||..+.+... |..++++
T Consensus 459 aVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~--- 535 (603)
T KOG0318|consen 459 AVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINC--- 535 (603)
T ss_pred EEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEE---
Confidence 467889999999998643 333556799999999999999999999999999999998765421 4445554
Q ss_pred CceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 74 KYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 74 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
++|+|+. .++++| +-|..|.||++.
T Consensus 536 -----~aWsP~n-~~vATG-------SlDt~Viiysv~ 560 (603)
T KOG0318|consen 536 -----VAWSPNN-KLVATG-------SLDTNVIIYSVK 560 (603)
T ss_pred -----EEeCCCc-eEEEec-------cccceEEEEEcc
Confidence 4555555 566888 999999999874
No 99
>KOG0267|consensus
Probab=99.43 E-value=3.5e-13 Score=89.85 Aligned_cols=95 Identities=18% Similarity=0.244 Sum_probs=78.5
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee----eecceeeeecCce
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK----YSHDMKTFSWKYT 76 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~~~~~~~~ 76 (111)
|.++.|.-.++||++..-+.+.+.+|...|..+.|+|+|++++.+++|..++|||...++... |...+
T Consensus 128 a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v-------- 199 (825)
T KOG0267|consen 128 ASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKV-------- 199 (825)
T ss_pred ccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccccccccc--------
Confidence 457788999999999888888999999999999999999999999999999999997766553 33333
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+.+.|+|.+ .++.+| +.|+++++||++
T Consensus 200 ~sle~hp~e-~Lla~G-------s~d~tv~f~dle 226 (825)
T KOG0267|consen 200 QSLEFHPLE-VLLAPG-------SSDRTVRFWDLE 226 (825)
T ss_pred cccccCchh-hhhccC-------CCCceeeeeccc
Confidence 344566655 556888 899999999985
No 100
>KOG0306|consensus
Probab=99.42 E-value=1.1e-12 Score=88.02 Aligned_cols=97 Identities=15% Similarity=0.207 Sum_probs=78.3
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
|+|.=|.+|++|.+.+-+....|.||.-+|.||..|||+.+++||+.|+.+++|.+..+.+-+ ++.++. ..+.+|.
T Consensus 524 aVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHK---S~fAHd-DSvm~V~ 599 (888)
T KOG0306|consen 524 AVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHK---SFFAHD-DSVMSVQ 599 (888)
T ss_pred EEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhh---hhhccc-CceeEEE
Confidence 456779999999999999999999999999999999999999999999999999998775543 122222 2345677
Q ss_pred EccCCCEEEEeccccCCccccCceEEEee
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
|-|.. +++.++ +.|+.|+.||
T Consensus 600 F~P~~-~~FFt~-------gKD~kvKqWD 620 (888)
T KOG0306|consen 600 FLPKT-HLFFTC-------GKDGKVKQWD 620 (888)
T ss_pred Ecccc-eeEEEe-------cCcceEEeec
Confidence 88855 444555 7899999997
No 101
>KOG0296|consensus
Probab=99.42 E-value=5.2e-12 Score=78.73 Aligned_cols=97 Identities=23% Similarity=0.322 Sum_probs=81.3
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee-eecceeeeecCceeeE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK-YSHDMKTFSWKYTQYS 79 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~-~~~~~~~~~~~~~~~v 79 (111)
||++-|..-.+|++.++.....+.+|...|.++.|+.||.+|++|+.+|.++||...++...- ..+++..+.| +
T Consensus 80 aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieW-----l 154 (399)
T KOG0296|consen 80 ATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEW-----L 154 (399)
T ss_pred EecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEE-----E
Confidence 578889999999999999999999999999999999999999999999999999998865443 2235555555 7
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.|+|.. .++..| +.|+.+=.|.+
T Consensus 155 ~WHp~a-~illAG-------~~DGsvWmw~i 177 (399)
T KOG0296|consen 155 KWHPRA-HILLAG-------STDGSVWMWQI 177 (399)
T ss_pred Eecccc-cEEEee-------cCCCcEEEEEC
Confidence 889855 555666 88999999976
No 102
>KOG0270|consensus
Probab=99.42 E-value=4.1e-12 Score=80.72 Aligned_cols=100 Identities=12% Similarity=0.116 Sum_probs=78.7
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
|+++-|.+|++||+.++++...+..|.+.|.++.|+|. ...|++|+.|+++.+.|.+...... .-+... +.+-.+
T Consensus 260 aSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~---~~wk~~-g~VEkv 335 (463)
T KOG0270|consen 260 ASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSG---KEWKFD-GEVEKV 335 (463)
T ss_pred EecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccC---ceEEec-cceEEE
Confidence 57888999999999999999999999999999999995 7899999999999999999632221 111111 234456
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|+|.....+.++ ..||.++-+|+|
T Consensus 336 ~w~~~se~~f~~~-------tddG~v~~~D~R 360 (463)
T KOG0270|consen 336 AWDPHSENSFFVS-------TDDGTVYYFDIR 360 (463)
T ss_pred EecCCCceeEEEe-------cCCceEEeeecC
Confidence 6677766666776 788889999886
No 103
>KOG0275|consensus
Probab=99.41 E-value=1.3e-13 Score=85.22 Aligned_cols=99 Identities=19% Similarity=0.201 Sum_probs=76.5
Q ss_pred CcccccCeeeecCCCCceeeeeee--------cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeee
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLT--------QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFS 72 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~--------~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~ 72 (111)
++++.||.|-+|++.+|+....++ -++..|.|++|+.|..++++|+.||+|++|.++++.+...... ..
T Consensus 229 vsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdr--AH- 305 (508)
T KOG0275|consen 229 VSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDR--AH- 305 (508)
T ss_pred eeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhhh--hh-
Confidence 478899999999999987655443 3678999999999999999999999999999999877651111 11
Q ss_pred cCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 73 WKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 73 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
-..++++.|+.+...++. + +.|.+++|--+
T Consensus 306 tkGvt~l~FSrD~SqiLS-~-------sfD~tvRiHGl 335 (508)
T KOG0275|consen 306 TKGVTCLSFSRDNSQILS-A-------SFDQTVRIHGL 335 (508)
T ss_pred ccCeeEEEEccCcchhhc-c-------cccceEEEecc
Confidence 134567788888888765 3 67888887654
No 104
>KOG4283|consensus
Probab=99.41 E-value=1.4e-12 Score=79.74 Aligned_cols=103 Identities=20% Similarity=0.218 Sum_probs=78.5
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCc-EEEEEeCCCeEEEEecCCC-cee----eeec------ce
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGR-YFATCSKDGYILVWTSSYP-SKV----KYSH------DM 68 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~-~l~s~~~d~~i~iw~~~~~-~~~----~~~~------~~ 68 (111)
|++.-|-.|++-|+.+|...+.|.||.+.|.++.|+|... .|++|+.|+.|++||++.. -++ .|.. +.
T Consensus 162 A~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~ 241 (397)
T KOG4283|consen 162 AAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKT 241 (397)
T ss_pred EEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccc
Confidence 3456677899999999999999999999999999999755 6888999999999999752 111 1210 11
Q ss_pred eeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 69 KTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 69 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+....+.++.++|..++.+++.+| .|..+++|++.
T Consensus 242 n~ah~gkvngla~tSd~~~l~~~g--------td~r~r~wn~~ 276 (397)
T KOG4283|consen 242 NTAHYGKVNGLAWTSDARYLASCG--------TDDRIRVWNME 276 (397)
T ss_pred cccccceeeeeeecccchhhhhcc--------CccceEEeecc
Confidence 112224577889999998887654 67889999863
No 105
>KOG2445|consensus
Probab=99.40 E-value=1.4e-11 Score=75.60 Aligned_cols=103 Identities=17% Similarity=0.244 Sum_probs=73.7
Q ss_pred CcccccCeeeecCCCCc----eeeeeeecccccEEEEEEcC-C-CcEEEEEeCCCeEEEEecCCCceeeee-cceee--e
Q psy8803 1 KKSWYEEYKRLDYHTPI----VETEVLTQHTHQVLHVSFSH-N-GRYFATCSKDGYILVWTSSYPSKVKYS-HDMKT--F 71 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~----~~~~~~~~~~~~v~~i~~s~-~-~~~l~s~~~d~~i~iw~~~~~~~~~~~-~~~~~--~ 71 (111)
|+.+.|++++|||.++. .+...++.|.+.|..+.|.+ . |+.+++++.|+++.||.-.......+. ..++. +
T Consensus 29 AtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl 108 (361)
T KOG2445|consen 29 ATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTL 108 (361)
T ss_pred eeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEe
Confidence 57889999999997644 56777889999999999954 5 999999999999999976321111110 11111 1
Q ss_pred e--cCceeeEEEccCC-CEEEEeccccCCccccCceEEEeec
Q psy8803 72 S--WKYTQYSQFNESD-TLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 72 ~--~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
. -+.++.|.|.|.. ..+++++ +.||.+|||+.
T Consensus 109 ~DsrssV~DV~FaP~hlGLklA~~-------~aDG~lRIYEA 143 (361)
T KOG2445|consen 109 VDSRSSVTDVKFAPKHLGLKLAAA-------SADGILRIYEA 143 (361)
T ss_pred ecCCcceeEEEecchhcceEEEEe-------ccCcEEEEEec
Confidence 1 1356788999944 4555666 88999999974
No 106
>KOG1274|consensus
Probab=99.39 E-value=6.2e-12 Score=85.66 Aligned_cols=103 Identities=20% Similarity=0.310 Sum_probs=80.2
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee-----------e-ecce
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK-----------Y-SHDM 68 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~-----------~-~~~~ 68 (111)
|.++.|-.|++-+.........+++|.+.|.++.|+|.+.+||+.+.||.+++|++.++.+.. . ...+
T Consensus 112 aagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~ 191 (933)
T KOG1274|consen 112 AAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRIC 191 (933)
T ss_pred EeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCcccccccccee
Confidence 457889999999999998899999999999999999999999999999999999998642111 0 1111
Q ss_pred eeeecCc------------------------------------eeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 69 KTFSWKY------------------------------------TQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 69 ~~~~~~~------------------------------------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
...+|+| ...++|+|.+.+|+++ ..++.|.|||++
T Consensus 192 ~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs--------~~~g~I~vWnv~ 262 (933)
T KOG1274|consen 192 TRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAAS--------TLDGQILVWNVD 262 (933)
T ss_pred eeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeee--------ccCCcEEEEecc
Confidence 2233332 2467999999887653 689999999974
No 107
>KOG0973|consensus
Probab=99.39 E-value=4.5e-12 Score=87.19 Aligned_cols=98 Identities=12% Similarity=0.181 Sum_probs=78.0
Q ss_pred CcccccCeeeecCCCC-------c-----------eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCcee
Q psy8803 1 KKSWYEEYKRLDYHTP-------I-----------VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKV 62 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~-------~-----------~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~ 62 (111)
|+++.|+.|.||.... + +.+..+.+|...|..++|+|++.+|++++.|.+|.+|+.++....
T Consensus 85 AsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~ 164 (942)
T KOG0973|consen 85 ASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELL 164 (942)
T ss_pred eeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceee
Confidence 6788999999999873 0 367788899999999999999999999999999999999886544
Q ss_pred eeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 63 KYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 63 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
. .+..+. +.+-.+.|.|-+.++++ - +.|++|+||++
T Consensus 165 ~---vl~~H~-s~VKGvs~DP~Gky~AS-q-------sdDrtikvwrt 200 (942)
T KOG0973|consen 165 K---VLRGHQ-SLVKGVSWDPIGKYFAS-Q-------SDDRTLKVWRT 200 (942)
T ss_pred e---eeeccc-ccccceEECCccCeeee-e-------cCCceEEEEEc
Confidence 3 122221 44556777888888754 4 78999999984
No 108
>KOG2394|consensus
Probab=99.39 E-value=1.3e-12 Score=84.83 Aligned_cols=75 Identities=16% Similarity=0.182 Sum_probs=63.7
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee----eecceeeeecCce
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK----YSHDMKTFSWKYT 76 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~~~~~~~~ 76 (111)
+=+-||++||+|+.+.+++-.++..-+...|++|||||++|++|++|..+.||.+...+.+. |..+|..+++.|.
T Consensus 307 ~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDpy 385 (636)
T KOG2394|consen 307 TVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDPY 385 (636)
T ss_pred EEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeeccc
Confidence 34679999999999888777777788899999999999999999999999999998766553 7778877776643
No 109
>KOG0306|consensus
Probab=99.38 E-value=2.6e-12 Score=86.18 Aligned_cols=94 Identities=18% Similarity=0.163 Sum_probs=74.3
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCc----eeeeecceeeeecCcee
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPS----KVKYSHDMKTFSWKYTQ 77 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~----~~~~~~~~~~~~~~~~~ 77 (111)
++=-||.|+||+..++....++.+|...|.++.|+..|..|++||.|+.|.+||+-... ...|...+....+
T Consensus 82 VGYaDGsVqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F---- 157 (888)
T KOG0306|consen 82 VGYADGSVQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALF---- 157 (888)
T ss_pred EEecCceEEeeccCCCceeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEeecchHHHhHHhc----
Confidence 44569999999999999999999999999999999999999999999999999996532 2225444443332
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
. .+..++++. +.|+.|++||++
T Consensus 158 ----~-~~~~~lvS~-------sKDs~iK~WdL~ 179 (888)
T KOG0306|consen 158 ----L-NGDSFLVSV-------SKDSMIKFWDLE 179 (888)
T ss_pred ----c-CCCeEEEEe-------ccCceEEEEecc
Confidence 2 344555666 899999999984
No 110
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.37 E-value=2.9e-11 Score=71.31 Aligned_cols=97 Identities=12% Similarity=0.115 Sum_probs=71.1
Q ss_pred cccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeC---CCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSK---DGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
..+..+.+||++ ++.+..+. ...+..+.|+|+|++++.++. .|.+.+||.+..+.+.... ......++
T Consensus 80 ~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~------~~~~t~~~ 150 (194)
T PF08662_consen 80 SMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE------HSDATDVE 150 (194)
T ss_pred cCCcccEEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc------cCcEEEEE
Confidence 456789999997 66666664 457788999999999999864 4679999999766554211 12245678
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|++.+++++....+. ..|+.++||++.
T Consensus 151 WsPdGr~~~ta~t~~r~--~~dng~~Iw~~~ 179 (194)
T PF08662_consen 151 WSPDGRYLATATTSPRL--RVDNGFKIWSFQ 179 (194)
T ss_pred EcCCCCEEEEEEeccce--eccccEEEEEec
Confidence 99999999877643333 468889999863
No 111
>KOG0308|consensus
Probab=99.37 E-value=8e-12 Score=82.71 Aligned_cols=94 Identities=21% Similarity=0.184 Sum_probs=74.2
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee----eecceeeeecCcee
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK----YSHDMKTFSWKYTQ 77 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~~~~~~~~~ 77 (111)
.++-.+-+++||.++++.+..+.||+..|.++..+.||+.+++++.|++|++||+...+++. |...++.+.
T Consensus 188 sGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~----- 262 (735)
T KOG0308|consen 188 SGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQ----- 262 (735)
T ss_pred ecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEe-----
Confidence 35567789999999999999999999999999999999999999999999999998766554 555555444
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
-+|+-.+ +.+| +.|+.|..=||+
T Consensus 263 ---~~~sf~~-vYsG-------~rd~~i~~Tdl~ 285 (735)
T KOG0308|consen 263 ---SSPSFTH-VYSG-------GRDGNIYRTDLR 285 (735)
T ss_pred ---eCCCcce-EEec-------CCCCcEEecccC
Confidence 2344444 4666 677777665553
No 112
>KOG0641|consensus
Probab=99.37 E-value=1.4e-11 Score=73.19 Aligned_cols=95 Identities=19% Similarity=0.165 Sum_probs=75.0
Q ss_pred CcccccCeeeecCCCCceeeeeee--cc-----cccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee----eeccee
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLT--QH-----THQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK----YSHDMK 69 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~--~~-----~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~ 69 (111)
|+++.|.+|++||++-..++..+. .| .+.|..++..|.|++|++|-.|..+.+||++.++.++ |...
T Consensus 198 ~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsad-- 275 (350)
T KOG0641|consen 198 ASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSAD-- 275 (350)
T ss_pred EccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccc--
Confidence 467899999999999777776663 12 3578999999999999999999999999999876554 3334
Q ss_pred eeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 70 TFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 70 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+.+|.|+|...++++ + +.|..|++-|++
T Consensus 276 ------ir~vrfsp~a~yllt-~-------syd~~ikltdlq 303 (350)
T KOG0641|consen 276 ------IRCVRFSPGAHYLLT-C-------SYDMKIKLTDLQ 303 (350)
T ss_pred ------eeEEEeCCCceEEEE-e-------cccceEEEeecc
Confidence 446677877766654 4 789999998875
No 113
>KOG1539|consensus
Probab=99.37 E-value=1.5e-11 Score=83.34 Aligned_cols=99 Identities=13% Similarity=0.154 Sum_probs=87.7
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
.++.+|.++||++++++.++.+.++...|.++.-+|--..++.|..+|+|.+++++..+.... ....|+.++.++|
T Consensus 177 vGs~~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~s----Fk~d~g~VtslSF 252 (910)
T KOG1539|consen 177 VGSSQGRLQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMS----FKQDWGRVTSLSF 252 (910)
T ss_pred EeecCCcEEEEEeccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEE----EEccccceeEEEe
Confidence 467889999999999999999999999999999999999999999999999999998877651 2234678889999
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
..++..++++| ...|.+.+|||+
T Consensus 253 rtDG~p~las~-------~~~G~m~~wDLe 275 (910)
T KOG1539|consen 253 RTDGNPLLASG-------RSNGDMAFWDLE 275 (910)
T ss_pred ccCCCeeEEec-------cCCceEEEEEcC
Confidence 99999999998 777889999985
No 114
>KOG0640|consensus
Probab=99.36 E-value=4e-12 Score=78.30 Aligned_cols=100 Identities=12% Similarity=0.173 Sum_probs=75.6
Q ss_pred CcccccCeeeecCCCCceeeeeee--cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceee
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLT--QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQY 78 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (111)
++++.|++|+++|+........++ .-...|.++.|+|.|.+|+.|.+-..+++||+++.+++....+-..+. ..++.
T Consensus 188 iS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht-~ai~~ 266 (430)
T KOG0640|consen 188 ISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHT-GAITQ 266 (430)
T ss_pred EeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccc-cceeE
Confidence 468899999999997543222222 246789999999999999999999999999999877765322222222 45677
Q ss_pred EEEccCCCEEEEeccccCCccccCceEEEee
Q psy8803 79 SQFNESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
|.+++.+... +++ +.||.|++||
T Consensus 267 V~Ys~t~~lY-vTa-------SkDG~IklwD 289 (430)
T KOG0640|consen 267 VRYSSTGSLY-VTA-------SKDGAIKLWD 289 (430)
T ss_pred EEecCCccEE-EEe-------ccCCcEEeec
Confidence 8888888665 666 8999999998
No 115
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.36 E-value=6.7e-12 Score=55.41 Aligned_cols=39 Identities=26% Similarity=0.492 Sum_probs=36.8
Q ss_pred ceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEe
Q psy8803 17 IVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWT 55 (111)
Q Consensus 17 ~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~ 55 (111)
++++..+.+|.+.|.+++|+|+++.|++++.|+.|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 467889999999999999999999999999999999997
No 116
>KOG0643|consensus
Probab=99.36 E-value=4.5e-12 Score=76.47 Aligned_cols=99 Identities=14% Similarity=0.116 Sum_probs=76.2
Q ss_pred ccccCeeeecCCCCce-eeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee---eeccee---------
Q psy8803 3 SWYEEYKRLDYHTPIV-ETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK---YSHDMK--------- 69 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~-~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~---~~~~~~--------- 69 (111)
+-.||.|.+||+++++ .+..-+.|...|..+++++|..++++++.|.+-++||+++..+++ -..+++
T Consensus 165 Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d 244 (327)
T KOG0643|consen 165 GHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLD 244 (327)
T ss_pred ecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeeecccccceecccccc
Confidence 4568999999999985 444557899999999999999999999999999999988642221 001111
Q ss_pred ---------------------------------------eeecCceeeEEEccCCCEEEEeccccCCccccCceEEEee
Q psy8803 70 ---------------------------------------TFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 70 ---------------------------------------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
...+.|+++++|+|++..+ ++| +.||.|++.-
T Consensus 245 ~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksY-sSG-------GEDG~VR~h~ 315 (327)
T KOG0643|consen 245 HVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSY-SSG-------GEDGYVRLHH 315 (327)
T ss_pred eEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCccc-ccC-------CCCceEEEEE
Confidence 1334577999999999775 777 8899998863
No 117
>KOG0288|consensus
Probab=99.35 E-value=2.1e-11 Score=77.12 Aligned_cols=99 Identities=14% Similarity=0.169 Sum_probs=76.5
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee-eecceeeeecCceeeEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK-YSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~-~~~~~~~~~~~~~~~v~ 80 (111)
++=+|++|++||+++..+......+. .|..+..++++..+++++.|.++.+.|+++....+ ......... +-.+-+.
T Consensus 317 SgH~DkkvRfwD~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~a-sDwtrvv 394 (459)
T KOG0288|consen 317 SGHFDKKVRFWDIRSADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCA-SDWTRVV 394 (459)
T ss_pred ecccccceEEEeccCCceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccc-cccceeE
Confidence 34578999999999888887777554 99999999999999999999999999999865443 211111111 1245789
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
|+|++.++ ++| +.||.|.||++
T Consensus 395 fSpd~~Yv-aAG-------S~dgsv~iW~v 416 (459)
T KOG0288|consen 395 FSPDGSYV-AAG-------SADGSVYIWSV 416 (459)
T ss_pred ECCCCcee-eec-------cCCCcEEEEEc
Confidence 99999886 555 88999999986
No 118
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.34 E-value=4.3e-11 Score=73.83 Aligned_cols=97 Identities=8% Similarity=0.083 Sum_probs=73.1
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEE-EEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYF-ATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l-~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
+...|+.+++||..+++.+..+..+. .+..+.|+|+++.+ ++++.++.+.+||..+.+....... . .....++
T Consensus 6 s~~~d~~v~~~d~~t~~~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~---~--~~~~~~~ 79 (300)
T TIGR03866 6 SNEKDNTISVIDTATLEVTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPS---G--PDPELFA 79 (300)
T ss_pred EecCCCEEEEEECCCCceEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccC---C--CCccEEE
Confidence 56789999999999888888887554 46789999998865 6677889999999987655432111 0 1234578
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
++|++..+++++ ..++.|.+||++
T Consensus 80 ~~~~g~~l~~~~-------~~~~~l~~~d~~ 103 (300)
T TIGR03866 80 LHPNGKILYIAN-------EDDNLVTVIDIE 103 (300)
T ss_pred ECCCCCEEEEEc-------CCCCeEEEEECC
Confidence 899998887766 667899999974
No 119
>KOG0278|consensus
Probab=99.34 E-value=2.5e-13 Score=81.34 Aligned_cols=94 Identities=17% Similarity=0.250 Sum_probs=74.4
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCcee-----eeecceeeeecCc
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKV-----KYSHDMKTFSWKY 75 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~-----~~~~~~~~~~~~~ 75 (111)
|+..-|=+-++||..+|..++.|+ |...|..++|+.|.+.|++|+.++.+++||++..... .|...++.+.|
T Consensus 75 asaaadftakvw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~w-- 151 (334)
T KOG0278|consen 75 ASAAADFTAKVWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLW-- 151 (334)
T ss_pred hhhcccchhhhhhhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEE--
Confidence 345567788999999999999887 9999999999999999999999999999999865432 25556665555
Q ss_pred eeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 76 TQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.-.+..++.+ ..|+.||+||.|
T Consensus 152 ------c~eD~~iLSS--------add~tVRLWD~r 173 (334)
T KOG0278|consen 152 ------CHEDKCILSS--------ADDKTVRLWDHR 173 (334)
T ss_pred ------eccCceEEee--------ccCCceEEEEec
Confidence 4455565553 578999999975
No 120
>KOG1188|consensus
Probab=99.34 E-value=8.3e-12 Score=77.30 Aligned_cols=104 Identities=21% Similarity=0.225 Sum_probs=80.5
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcC--CCcEEEEEeCCCeEEEEecCCCceee------ee-cceeee
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSH--NGRYFATCSKDGYILVWTSSYPSKVK------YS-HDMKTF 71 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~--~~~~l~s~~~d~~i~iw~~~~~~~~~------~~-~~~~~~ 71 (111)
|++...|.|++||..+++.+..|+++...+..+.|.. ..+.+.+++.||+|++||++...... +. .+..++
T Consensus 44 av~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~l 123 (376)
T KOG1188|consen 44 AVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICL 123 (376)
T ss_pred EEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEe
Confidence 4678899999999999999999999999999999977 36788999999999999998631110 11 001111
Q ss_pred ec----------------------------------------CceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 72 SW----------------------------------------KYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 72 ~~----------------------------------------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+. .-++.+.|+|.+..++.+| +.||-|.++|++
T Consensus 124 d~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSG-------SvDGLvnlfD~~ 196 (376)
T KOG1188|consen 124 DLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSG-------SVDGLVNLFDTK 196 (376)
T ss_pred eccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEee-------cccceEEeeecC
Confidence 10 0136899999999999999 999999999974
No 121
>KOG0270|consensus
Probab=99.33 E-value=3.3e-12 Score=81.12 Aligned_cols=100 Identities=19% Similarity=0.211 Sum_probs=76.1
Q ss_pred CcccccCeeeecCCCC---ceeeeee------------------ecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCC
Q psy8803 1 KKSWYEEYKRLDYHTP---IVETEVL------------------TQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~---~~~~~~~------------------~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~ 58 (111)
|.+..|..|.|||+.- -.+...| .+|+..|..+.|... .+.|++||.|.++++||+..
T Consensus 196 AiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~ 275 (463)
T KOG0270|consen 196 AIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDT 275 (463)
T ss_pred EEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEEEcCC
Confidence 5678899999999841 1111122 268888999999876 67899999999999999998
Q ss_pred CceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 59 PSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+++... +. ..-..+++++|+|....++.+| +.|++|++.|.|
T Consensus 276 g~p~~s---~~-~~~k~Vq~l~wh~~~p~~LLsG-------s~D~~V~l~D~R 317 (463)
T KOG0270|consen 276 GKPKSS---IT-HHGKKVQTLEWHPYEPSVLLSG-------SYDGTVALKDCR 317 (463)
T ss_pred CCccee---hh-hcCCceeEEEecCCCceEEEec-------cccceEEeeecc
Confidence 776541 11 2225677788888888888998 999999999976
No 122
>KOG4378|consensus
Probab=99.33 E-value=9.7e-12 Score=80.54 Aligned_cols=97 Identities=14% Similarity=0.122 Sum_probs=76.4
Q ss_pred cccccCeeeecCCCCceeeeee-ecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVL-TQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~-~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
+.+++|.|.+||.....++..+ +.|..+...|+|+|. ..+|++.+.|++|.+||++...... ... +-.|...|
T Consensus 182 ~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~----~l~-y~~Plstv 256 (673)
T KOG4378|consen 182 IASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTD----RLT-YSHPLSTV 256 (673)
T ss_pred eeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccc----eee-ecCCccee
Confidence 4678999999999976666655 689999999999996 5689999999999999998644322 111 12567789
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|.+++.++ +.| ...|.|..||+|
T Consensus 257 af~~~G~~L-~aG-------~s~G~~i~YD~R 280 (673)
T KOG4378|consen 257 AFSECGTYL-CAG-------NSKGELIAYDMR 280 (673)
T ss_pred eecCCceEE-Eee-------cCCceEEEEecc
Confidence 999888665 666 778999999987
No 123
>KOG2096|consensus
Probab=99.32 E-value=9.4e-12 Score=76.85 Aligned_cols=84 Identities=23% Similarity=0.304 Sum_probs=64.6
Q ss_pred eeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCcc
Q psy8803 20 TEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQ 99 (111)
Q Consensus 20 ~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 99 (111)
+..|++|.+.|.+++|+.||..|++++.|+.|++|++++.....|..--..+.....+.|+|.|+...++++.
T Consensus 79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~------- 151 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSV------- 151 (420)
T ss_pred hhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEE-------
Confidence 3456799999999999999999999999999999999875443332111123334567899999999988887
Q ss_pred ccCceEEEeec
Q psy8803 100 STSGEIAVFSL 110 (111)
Q Consensus 100 ~~~~~i~iw~~ 110 (111)
-..+++++|.+
T Consensus 152 ~~g~~l~vyk~ 162 (420)
T KOG2096|consen 152 KRGNKLCVYKL 162 (420)
T ss_pred ccCCEEEEEEe
Confidence 56777888864
No 124
>KOG0973|consensus
Probab=99.31 E-value=2.6e-11 Score=83.56 Aligned_cols=58 Identities=26% Similarity=0.281 Sum_probs=54.0
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
|+.+.|++|-||+..+-+.+..+.+|++.|..+.|+|-|++|++.+.|+++++|++.+
T Consensus 145 vS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~d 202 (942)
T KOG0973|consen 145 VSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSD 202 (942)
T ss_pred EEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEccc
Confidence 3567899999999999999999999999999999999999999999999999999654
No 125
>KOG0296|consensus
Probab=99.31 E-value=2.5e-11 Score=75.76 Aligned_cols=93 Identities=12% Similarity=0.117 Sum_probs=73.5
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee----eecceeeeecCce
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK----YSHDMKTFSWKYT 76 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~~~~~~~~ 76 (111)
|.++-||+|-|||+..-...+.+. |...|..+.|-+ ..+|++++.+|.++.||.+++++.. |...|
T Consensus 302 A~G~vdG~i~iyD~a~~~~R~~c~-he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~I-------- 371 (399)
T KOG0296|consen 302 ACGSVDGTIAIYDLAASTLRHICE-HEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGI-------- 371 (399)
T ss_pred hcccccceEEEEecccchhheecc-CCCceEEEEEcC-cchheeeccCceEEeeeccccceEEEEecCchhe--------
Confidence 568899999999998666555544 888999999998 7889999999999999999987654 44444
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+..+.+|+.+.+ +++ +.|++.+|++++
T Consensus 372 l~f~ls~~~~~v-vT~-------s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 372 LDFALSPQKRLV-VTV-------SDDNTALVFEVP 398 (399)
T ss_pred eEEEEcCCCcEE-EEe-------cCCCeEEEEecC
Confidence 445566666655 555 889999999863
No 126
>KOG0308|consensus
Probab=99.28 E-value=2.7e-11 Score=80.29 Aligned_cols=95 Identities=14% Similarity=0.215 Sum_probs=73.9
Q ss_pred CcccccCeeeecCCCCce----------eeeeee-cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCcee----eee
Q psy8803 1 KKSWYEEYKRLDYHTPIV----------ETEVLT-QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKV----KYS 65 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~----------~~~~~~-~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~----~~~ 65 (111)
|+++-|+.|.+||++.+. ....+. |+...|+.++..+.|..|++|+..+.+++||.++.... +|.
T Consensus 134 aSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHT 213 (735)
T KOG0308|consen 134 ASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHT 213 (735)
T ss_pred EecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccc
Confidence 578889999999999762 223333 78889999999999999999999999999999985432 365
Q ss_pred cceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 66 HDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 66 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
..++.+. .++++..+ .++ +.|++|++||+.
T Consensus 214 dNVr~ll--------~~dDGt~~-ls~-------sSDgtIrlWdLg 243 (735)
T KOG0308|consen 214 DNVRVLL--------VNDDGTRL-LSA-------SSDGTIRLWDLG 243 (735)
T ss_pred cceEEEE--------EcCCCCeE-eec-------CCCceEEeeecc
Confidence 5565544 45677776 455 789999999984
No 127
>KOG1009|consensus
Probab=99.27 E-value=4.3e-11 Score=75.57 Aligned_cols=103 Identities=18% Similarity=0.224 Sum_probs=72.0
Q ss_pred CcccccCeeeecCCCCc---------eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCce------e---
Q psy8803 1 KKSWYEEYKRLDYHTPI---------VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSK------V--- 62 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~---------~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~------~--- 62 (111)
||+.-|..|+||-++.+ +....|..|+..|.++.|+|+|.+|++|+.++.+.+|-...... .
T Consensus 30 aT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ 109 (434)
T KOG1009|consen 30 ATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLN 109 (434)
T ss_pred ecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhC
Confidence 57889999999999643 34556778999999999999999999999999999997762100 0
Q ss_pred eeecceeee---ecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 63 KYSHDMKTF---SWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 63 ~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
...-.+... .-.-+..++|+|++..+ +++ +.|+.+.+||++
T Consensus 110 ke~w~v~k~lr~h~~diydL~Ws~d~~~l-~s~-------s~dns~~l~Dv~ 153 (434)
T KOG1009|consen 110 KEKWVVKKVLRGHRDDIYDLAWSPDSNFL-VSG-------SVDNSVRLWDVH 153 (434)
T ss_pred ccceEEEEEecccccchhhhhccCCCcee-eee-------eccceEEEEEec
Confidence 000000000 01223445666676554 666 899999999974
No 128
>KOG0299|consensus
Probab=99.27 E-value=1.7e-11 Score=78.28 Aligned_cols=58 Identities=14% Similarity=0.175 Sum_probs=54.0
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
|++.-|.++.||+..+.+++..|.+|.+.|.+++|-....-+.+++.|+.+++|++..
T Consensus 218 atgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~ 275 (479)
T KOG0299|consen 218 ATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQ 275 (479)
T ss_pred EecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhH
Confidence 5778899999999999999999999999999999998888899999999999999875
No 129
>KOG0321|consensus
Probab=99.26 E-value=1.6e-11 Score=81.14 Aligned_cols=101 Identities=14% Similarity=0.151 Sum_probs=77.1
Q ss_pred cccccCeeeecCCCCce------eeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCc
Q psy8803 2 KSWYEEYKRLDYHTPIV------ETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKY 75 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~------~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~ 75 (111)
.+.-||.|.++|.+... .+..+..|...|..+.|.|-...|++++.|.++++||++...+.+.. +.-..-..
T Consensus 69 vadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~--~~~GH~~S 146 (720)
T KOG0321|consen 69 VADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGR--LNLGHTGS 146 (720)
T ss_pred EecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecce--eecccccc
Confidence 45678999999987532 24566689999999999996678999999999999999876554411 11001123
Q ss_pred eeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 76 TQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+.+++|.|.+..++++| +.|+.|.|||+|
T Consensus 147 vkS~cf~~~n~~vF~tG-------gRDg~illWD~R 175 (720)
T KOG0321|consen 147 VKSECFMPTNPAVFCTG-------GRDGEILLWDCR 175 (720)
T ss_pred cchhhhccCCCcceeec-------cCCCcEEEEEEe
Confidence 34678999999999999 999999999986
No 130
>KOG0288|consensus
Probab=99.26 E-value=6e-11 Score=75.12 Aligned_cols=98 Identities=16% Similarity=0.175 Sum_probs=75.6
Q ss_pred cccccCeeeecCCCCceeeeeeecc----cccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCcee
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQH----THQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQ 77 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~----~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 77 (111)
+++-|.++.+.|.+..+....+.+. .+....+.|||++.++++|+.|+.++||++.++++......-.+ ...++
T Consensus 358 sssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s--~~aI~ 435 (459)
T KOG0288|consen 358 SSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTS--NAAIT 435 (459)
T ss_pred eecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCC--CcceE
Confidence 4677899999999988777766532 34578899999999999999999999999999887653221111 12478
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEee
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
+++|+|.+.+++.+ +.++.+.+|.
T Consensus 436 s~~W~~sG~~Llsa--------dk~~~v~lW~ 459 (459)
T KOG0288|consen 436 SLSWNPSGSGLLSA--------DKQKAVTLWT 459 (459)
T ss_pred EEEEcCCCchhhcc--------cCCcceEecC
Confidence 89999999888663 6788899883
No 131
>KOG1036|consensus
Probab=99.25 E-value=9.8e-11 Score=71.71 Aligned_cols=91 Identities=15% Similarity=0.166 Sum_probs=70.0
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee---eecceeeeecCceee
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK---YSHDMKTFSWKYTQY 78 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~---~~~~~~~~~~~~~~~ 78 (111)
++.-||.|+.+|++.++.. .+..|...+.|+.+++....+++|+-|++|++||.+...... ...++.++..
T Consensus 70 ~G~~dg~vr~~Dln~~~~~-~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~v----- 143 (323)
T KOG1036|consen 70 TGGLDGQVRRYDLNTGNED-QIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCMDV----- 143 (323)
T ss_pred EeccCceEEEEEecCCcce-eeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccccCceEEEEec-----
Confidence 5778999999999977654 356699999999999999999999999999999999633222 2234555543
Q ss_pred EEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 79 SQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.+..|++ | ..++.+.+||+|
T Consensus 144 -----~g~~LvV-g-------~~~r~v~iyDLR 163 (323)
T KOG1036|consen 144 -----SGNRLVV-G-------TSDRKVLIYDLR 163 (323)
T ss_pred -----cCCEEEE-e-------ecCceEEEEEcc
Confidence 4555544 3 568999999987
No 132
>KOG0301|consensus
Probab=99.23 E-value=2.6e-10 Score=76.16 Aligned_cols=91 Identities=14% Similarity=0.195 Sum_probs=67.7
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC-Cceeeee-cceeeeecCceeeE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY-PSKVKYS-HDMKTFSWKYTQYS 79 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~-~~~~~~~-~~~~~~~~~~~~~v 79 (111)
+.++||.|++|++ +++.+..+.+|+..+++++..++++.++++++|+++++|+... .++..+. ..+++ +
T Consensus 195 ScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~e~~q~I~lPttsiWs--------a 265 (745)
T KOG0301|consen 195 SCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKDECVQVITLPTTSIWS--------A 265 (745)
T ss_pred eecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecCceEEEEecCccceEE--------E
Confidence 4578999999999 5888888999999999999888999999999999999998762 1112221 12322 3
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.+-+++.. ++| +.||.|+||-.
T Consensus 266 ~~L~NgDI--vvg-------~SDG~VrVfT~ 287 (745)
T KOG0301|consen 266 KVLLNGDI--VVG-------GSDGRVRVFTV 287 (745)
T ss_pred EEeeCCCE--EEe-------ccCceEEEEEe
Confidence 33334443 344 77999999964
No 133
>KOG1007|consensus
Probab=99.22 E-value=6.7e-11 Score=72.30 Aligned_cols=93 Identities=18% Similarity=0.321 Sum_probs=72.5
Q ss_pred ccccCeeeecCCCCceeeeeee-cccccEEEEEEcCCC-cEEEEEeCCCeEEEEecCCCcee-----eeecceeeeecCc
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLT-QHTHQVLHVSFSHNG-RYFATCSKDGYILVWTSSYPSKV-----KYSHDMKTFSWKY 75 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~i~~s~~~-~~l~s~~~d~~i~iw~~~~~~~~-----~~~~~~~~~~~~~ 75 (111)
...|++++.||.++.+....++ +|...|..+.|.|+. .+|++|+.|+.+++||.+..+.. .|.-.++
T Consensus 189 tt~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW------ 262 (370)
T KOG1007|consen 189 TTSDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVW------ 262 (370)
T ss_pred EeCCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEE------
Confidence 3568999999999877766664 788899999999985 57899999999999999874322 1333443
Q ss_pred eeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 76 TQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+|.|+|....++.++ +.|..|.+|..
T Consensus 263 --~VRfn~~hdqLiLs~-------~SDs~V~Lsca 288 (370)
T KOG1007|consen 263 --AVRFNPEHDQLILSG-------GSDSAVNLSCA 288 (370)
T ss_pred --EEEecCccceEEEec-------CCCceeEEEec
Confidence 577888777777887 77888888753
No 134
>KOG0642|consensus
Probab=99.21 E-value=1.3e-10 Score=75.93 Aligned_cols=93 Identities=16% Similarity=0.170 Sum_probs=71.1
Q ss_pred cccccCeeeecCCC---C-----ceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCC--------------
Q psy8803 2 KSWYEEYKRLDYHT---P-----IVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYP-------------- 59 (111)
Q Consensus 2 ~~~~d~~i~iw~~~---~-----~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~-------------- 59 (111)
+.+-||++++|++. . -+++.+|.+|.++|.|++..+.+..+.+|+-|++|+.|++...
T Consensus 311 t~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~ 390 (577)
T KOG0642|consen 311 TASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSG 390 (577)
T ss_pred EeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhcc
Confidence 56789999999992 1 2688999999999999999999999999999999999976532
Q ss_pred ceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 60 SKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
...+|...++ .+++++....| .++ +.|++++.|+.
T Consensus 391 ~l~Ghtdavw--------~l~~s~~~~~L-lsc-------s~DgTvr~w~~ 425 (577)
T KOG0642|consen 391 TLLGHTDAVW--------LLALSSTKDRL-LSC-------SSDGTVRLWEP 425 (577)
T ss_pred ceecccccee--------eeeecccccce-eee-------cCCceEEeecc
Confidence 1122333333 45667665554 444 78999999974
No 135
>KOG0307|consensus
Probab=99.21 E-value=8.2e-12 Score=86.46 Aligned_cols=102 Identities=22% Similarity=0.260 Sum_probs=77.5
Q ss_pred CcccccCeeeecCCCC---c---eeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCceeeeecceeeeec
Q psy8803 1 KKSWYEEYKRLDYHTP---I---VETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSW 73 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~---~---~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~ 73 (111)
|.+.-||.|-+||... + +.+.++..|++.|..+.|.+. +++|++|+.|+.|.|||+.......+.....- -
T Consensus 84 aGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~--~ 161 (1049)
T KOG0307|consen 84 AGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAP--P 161 (1049)
T ss_pred eccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCC--c
Confidence 4678899999999975 2 345566789999999999997 55999999999999999987544332211100 1
Q ss_pred CceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 74 KYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 74 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
..+.+++|+..-.++++++ +.++.+.|||+|
T Consensus 162 ~eI~~lsWNrkvqhILAS~-------s~sg~~~iWDlr 192 (1049)
T KOG0307|consen 162 SEIKCLSWNRKVSHILASG-------SPSGRAVIWDLR 192 (1049)
T ss_pred ccceEeccchhhhHHhhcc-------CCCCCceecccc
Confidence 2344666777888999998 788889999997
No 136
>KOG0294|consensus
Probab=99.20 E-value=3.5e-10 Score=69.72 Aligned_cols=95 Identities=14% Similarity=0.153 Sum_probs=72.2
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
++..||.|.+|+..+-+++..+++|.+.|..++.+|.+++=++.+.|+.+++||+-.++... +..+. .....|.|
T Consensus 102 S~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~----v~~L~-~~at~v~w 176 (362)
T KOG0294|consen 102 SGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAF----VLNLK-NKATLVSW 176 (362)
T ss_pred eecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccce----eeccC-CcceeeEE
Confidence 45789999999999999999999999999999999999999999999999999986554322 11111 11223677
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+|.+.++++.+ .+.|-||.+
T Consensus 177 ~~~Gd~F~v~~---------~~~i~i~q~ 196 (362)
T KOG0294|consen 177 SPQGDHFVVSG---------RNKIDIYQL 196 (362)
T ss_pred cCCCCEEEEEe---------ccEEEEEec
Confidence 77777776643 455766654
No 137
>KOG0301|consensus
Probab=99.20 E-value=1.3e-10 Score=77.53 Aligned_cols=93 Identities=17% Similarity=0.219 Sum_probs=53.2
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
|++-|.+|++|.- ++.+..|.+|++.|+.+++-++ ..|++++.||.|++|++.......+.+ +. +.+.+++.
T Consensus 156 TgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~-~~flScsNDg~Ir~w~~~ge~l~~~~g----ht-n~vYsis~ 227 (745)
T KOG0301|consen 156 TGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDD-SHFLSCSNDGSIRLWDLDGEVLLEMHG----HT-NFVYSISM 227 (745)
T ss_pred eccCcceeeeccC--CchhhhhccchhheeeeEEecC-CCeEeecCCceEEEEeccCceeeeeec----cc-eEEEEEEe
Confidence 4555666666654 4555666667777777666543 344566666777777764433222110 00 22334554
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
..++..+ +++ +.|++++||+.
T Consensus 228 ~~~~~~I-vs~-------gEDrtlriW~~ 248 (745)
T KOG0301|consen 228 ALSDGLI-VST-------GEDRTLRIWKK 248 (745)
T ss_pred cCCCCeE-EEe-------cCCceEEEeec
Confidence 4455555 454 69999999974
No 138
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.20 E-value=7.5e-10 Score=68.33 Aligned_cols=97 Identities=11% Similarity=0.084 Sum_probs=68.0
Q ss_pred ccccCeeeecCCCCceeeeeeeccc-----c--cEEEEEEcCCCcEE-EEEeCCCeEEEEecCCCceeeeecceeeeecC
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHT-----H--QVLHVSFSHNGRYF-ATCSKDGYILVWTSSYPSKVKYSHDMKTFSWK 74 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~-----~--~v~~i~~s~~~~~l-~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 74 (111)
+..++.+++||..+++.+..+..+. . ....+.|+|+++.+ ++.+.+..+.+||.++.+..... . . -.
T Consensus 175 ~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~---~-~-~~ 249 (300)
T TIGR03866 175 SEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYL---L-V-GQ 249 (300)
T ss_pred cCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEE---E-e-CC
Confidence 4468999999999887766654221 1 23468899999874 44455678999999876554321 1 1 13
Q ss_pred ceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 75 YTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.+..++|+|++..++++. ..++.|.+||++
T Consensus 250 ~~~~~~~~~~g~~l~~~~-------~~~~~i~v~d~~ 279 (300)
T TIGR03866 250 RVWQLAFTPDEKYLLTTN-------GVSNDVSVIDVA 279 (300)
T ss_pred CcceEEECCCCCEEEEEc-------CCCCeEEEEECC
Confidence 455789999999887765 568899999974
No 139
>KOG0647|consensus
Probab=99.20 E-value=1.9e-10 Score=70.54 Aligned_cols=91 Identities=14% Similarity=0.128 Sum_probs=66.4
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCC--cEEEEEeCCCeEEEEecCCCceee---eecceeeeecCce
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNG--RYFATCSKDGYILVWTSSYPSKVK---YSHDMKTFSWKYT 76 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~--~~l~s~~~d~~i~iw~~~~~~~~~---~~~~~~~~~~~~~ 76 (111)
+++-|+.+++||+.+++ ......|.+.|.++.|-+-. ..|++|+-|++|+.||++....+. ....+.+...
T Consensus 89 ~g~~Dk~~k~wDL~S~Q-~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv--- 164 (347)
T KOG0647|consen 89 SGGCDKQAKLWDLASGQ-VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADV--- 164 (347)
T ss_pred eeccCCceEEEEccCCC-eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhc---
Confidence 46779999999999995 55667899999999998754 489999999999999999765543 1123333321
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
. .-+++.+ ..++.|.+++|+
T Consensus 165 -------~-~pm~vVa-------ta~r~i~vynL~ 184 (347)
T KOG0647|consen 165 -------L-YPMAVVA-------TAERHIAVYNLE 184 (347)
T ss_pred -------c-CceeEEE-------ecCCcEEEEEcC
Confidence 2 2233333 568889999884
No 140
>KOG1332|consensus
Probab=99.19 E-value=7.5e-11 Score=70.54 Aligned_cols=103 Identities=17% Similarity=0.170 Sum_probs=74.3
Q ss_pred CcccccCeeeecCCCCce--eeeeeecccccEEEEEEcCC--CcEEEEEeCCCeEEEEecCCC--c-----eeeeeccee
Q psy8803 1 KKSWYEEYKRLDYHTPIV--ETEVLTQHTHQVLHVSFSHN--GRYFATCSKDGYILVWTSSYP--S-----KVKYSHDMK 69 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~i~~s~~--~~~l~s~~~d~~i~iw~~~~~--~-----~~~~~~~~~ 69 (111)
|+.+|||.|-||....+. ..+....|...|.+++|.|. |-+|++++.||.|.+.+.+.. . ...|...++
T Consensus 74 AScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~Gvn 153 (299)
T KOG1332|consen 74 ASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVN 153 (299)
T ss_pred eEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccc
Confidence 578999999999998773 45555689999999999996 678999999999999998753 1 122555566
Q ss_pred eeecCcee----eEEEccCC-CEEEEeccccCCccccCceEEEeec
Q psy8803 70 TFSWKYTQ----YSQFNESD-TLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 70 ~~~~~~~~----~v~~~~~~-~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.+.|.|.+ .+...|.. .+-+++| +-|+.|+||+.
T Consensus 154 sVswapa~~~g~~~~~~~~~~~krlvSg-------GcDn~VkiW~~ 192 (299)
T KOG1332|consen 154 SVSWAPASAPGSLVDQGPAAKVKRLVSG-------GCDNLVKIWKF 192 (299)
T ss_pred eeeecCcCCCccccccCcccccceeecc-------CCccceeeeec
Confidence 66665431 12222211 2446777 78999999975
No 141
>KOG1310|consensus
Probab=99.19 E-value=1.5e-10 Score=75.97 Aligned_cols=82 Identities=22% Similarity=0.280 Sum_probs=65.0
Q ss_pred eeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEcc-CCCEEEEeccccCC
Q psy8803 19 ETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNE-SDTLLLVSGVHFGT 97 (111)
Q Consensus 19 ~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~ 97 (111)
+...|+||++-|.|+.|..+|.+|++|+.|-.+.|||....+..+ .+....-..+.++.|-| ....++++|
T Consensus 42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~Kllh---sI~TgHtaNIFsvKFvP~tnnriv~sg----- 113 (758)
T KOG1310|consen 42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLH---SISTGHTANIFSVKFVPYTNNRIVLSG----- 113 (758)
T ss_pred hhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceee---eeecccccceeEEeeeccCCCeEEEec-----
Confidence 345678999999999999999999999999999999998655444 23222224455778888 566888888
Q ss_pred ccccCceEEEeec
Q psy8803 98 PQSTSGEIAVFSL 110 (111)
Q Consensus 98 ~~~~~~~i~iw~~ 110 (111)
..|..|+++|+
T Consensus 114 --AgDk~i~lfdl 124 (758)
T KOG1310|consen 114 --AGDKLIKLFDL 124 (758)
T ss_pred --cCcceEEEEec
Confidence 88999999997
No 142
>KOG1063|consensus
Probab=99.18 E-value=1.6e-10 Score=77.15 Aligned_cols=87 Identities=17% Similarity=0.269 Sum_probs=69.2
Q ss_pred eeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCce--------eeeecceeeeecCceeeE
Q psy8803 8 YKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSK--------VKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~--------~~~~~~~~~~~~~~~~~v 79 (111)
-|++|+..+-..+..+.+|.-.|..++||||+++|++.+.|++..+|....... ..|..-+...
T Consensus 553 vI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdc-------- 624 (764)
T KOG1063|consen 553 VIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDC-------- 624 (764)
T ss_pred EEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEc--------
Confidence 489999988888889999999999999999999999999999999998754221 1243344444
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.|+|++.+ ++++ ++|.+|+||..
T Consensus 625 sW~pde~~-FaTa-------SRDK~VkVW~~ 647 (764)
T KOG1063|consen 625 SWSPDEKY-FATA-------SRDKKVKVWEE 647 (764)
T ss_pred ccCcccce-eEEe-------cCCceEEEEec
Confidence 45667766 5666 99999999975
No 143
>KOG0268|consensus
Probab=99.18 E-value=6.1e-11 Score=74.21 Aligned_cols=91 Identities=16% Similarity=0.242 Sum_probs=69.4
Q ss_pred ccccCeeeecCCCCc-eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCce--eeee---cceeeeecCce
Q psy8803 3 SWYEEYKRLDYHTPI-VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSK--VKYS---HDMKTFSWKYT 76 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~-~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~--~~~~---~~~~~~~~~~~ 76 (111)
++-|..+.++|.+.. .++....+|.+.|..+.|+|.|+.|++|+.|++|+||..+.+.. ..|. +.+.++.
T Consensus 247 a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk---- 322 (433)
T KOG0268|consen 247 ANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVK---- 322 (433)
T ss_pred ccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEE----
Confidence 455777888888754 56777789999999999999999999999999999999876432 2232 2344444
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEee
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
|+-+ ..++.+| +.|+.|++|.
T Consensus 323 ----~S~D-skyi~SG-------Sdd~nvRlWk 343 (433)
T KOG0268|consen 323 ----YSMD-SKYIISG-------SDDGNVRLWK 343 (433)
T ss_pred ----Eecc-ccEEEec-------CCCcceeeee
Confidence 4544 4556888 9999999996
No 144
>KOG1272|consensus
Probab=99.17 E-value=6.8e-11 Score=75.96 Aligned_cols=92 Identities=15% Similarity=0.170 Sum_probs=69.4
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
++-..|+|.+|.....+++..+..|.+.|..+++.++|++++|.+.|..++|||++....+. .... -.+.+.+++
T Consensus 268 ~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~---t~~t--p~~a~~ls~ 342 (545)
T KOG1272|consen 268 LGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLH---TYRT--PHPASNLSL 342 (545)
T ss_pred EcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccc---eeec--CCCcccccc
Confidence 35578999999999999999999999999999999999999999999999999999765333 1111 123344556
Q ss_pred ccCCCEEEEeccccCCccccCceEEEe
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVF 108 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw 108 (111)
+..+ .+++ +....+.||
T Consensus 343 Sqkg-lLA~---------~~G~~v~iw 359 (545)
T KOG1272|consen 343 SQKG-LLAL---------SYGDHVQIW 359 (545)
T ss_pred cccc-ceee---------ecCCeeeee
Confidence 6444 3333 345567777
No 145
>KOG1408|consensus
Probab=99.17 E-value=2.2e-10 Score=77.29 Aligned_cols=97 Identities=19% Similarity=0.142 Sum_probs=81.0
Q ss_pred cccccCeeeecCCCCceeeeeeec---ccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceee
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQ---HTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQY 78 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~---~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (111)
+...|.-|+|||+.+++....|++ |++....+..+|.|.++++.+.|+++.++|..+++++.. +..+. ..++.
T Consensus 613 t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~---m~GHs-E~VTG 688 (1080)
T KOG1408|consen 613 TVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQ---MTGHS-EAVTG 688 (1080)
T ss_pred EEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhh---hcCcc-hheee
Confidence 567899999999999999999975 667888899999999999999999999999999888762 33332 35667
Q ss_pred EEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 79 SQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+.|.++..+++.. +.|+.|-||.+
T Consensus 689 ~kF~nDCkHlISv--------sgDgCIFvW~l 712 (1080)
T KOG1408|consen 689 VKFLNDCKHLISV--------SGDGCIFVWKL 712 (1080)
T ss_pred eeecccchhheee--------cCCceEEEEEC
Confidence 8899999887653 67999999986
No 146
>KOG1445|consensus
Probab=99.17 E-value=6.1e-11 Score=79.07 Aligned_cols=95 Identities=15% Similarity=0.176 Sum_probs=75.2
Q ss_pred CcccccCeeeecCCCCc-------eeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCc----eeeeecce
Q psy8803 1 KKSWYEEYKRLDYHTPI-------VETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPS----KVKYSHDM 68 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~-------~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~----~~~~~~~~ 68 (111)
|+...||.|+||-+..+ .+...+++|...|+.+.|+|- .+.|++++.|-+|++||+.+.. ...|...+
T Consensus 644 AVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqI 723 (1012)
T KOG1445|consen 644 AVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQI 723 (1012)
T ss_pred eecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCce
Confidence 56789999999999753 455667889999999999996 7899999999999999998753 33466666
Q ss_pred eeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 69 KTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 69 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
..+ +|+|++..++.. +.|++|++++-|
T Consensus 724 f~~--------AWSpdGr~~AtV--------cKDg~~rVy~Pr 750 (1012)
T KOG1445|consen 724 FGI--------AWSPDGRRIATV--------CKDGTLRVYEPR 750 (1012)
T ss_pred eEE--------EECCCCcceeee--------ecCceEEEeCCC
Confidence 554 557788877654 589999999753
No 147
>KOG4378|consensus
Probab=99.16 E-value=2.4e-10 Score=74.28 Aligned_cols=97 Identities=16% Similarity=0.250 Sum_probs=78.9
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCcee---eeecceeeeecCceee
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKV---KYSHDMKTFSWKYTQY 78 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~---~~~~~~~~~~~~~~~~ 78 (111)
+++-.+.|+|||++.......+++|++.|.++.+.-...+|++++..|-|.|..+.+.... .+.. ...+..
T Consensus 96 sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~s------gqsvRl 169 (673)
T KOG4378|consen 96 SGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDS------GQSVRL 169 (673)
T ss_pred ccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCC------CCeEEE
Confidence 4566789999999977777888999999999999998999999999999999998875432 2210 012346
Q ss_pred EEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 79 SQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+.|+|....++.++ +.+|.|.+||++
T Consensus 170 l~ys~skr~lL~~a-------sd~G~VtlwDv~ 195 (673)
T KOG4378|consen 170 LRYSPSKRFLLSIA-------SDKGAVTLWDVQ 195 (673)
T ss_pred eecccccceeeEee-------ccCCeEEEEecc
Confidence 78899999999998 999999999974
No 148
>KOG0640|consensus
Probab=99.16 E-value=1.9e-10 Score=71.06 Aligned_cols=96 Identities=21% Similarity=0.262 Sum_probs=73.1
Q ss_pred ccCeeeecCCCCceeeeee---ecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 5 YEEYKRLDYHTPIVETEVL---TQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~---~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
.-.++++||+++.++...- .+|++.|.++.+++.+++.++++.||.|++||=-+.+++.... +.+.-+.+.+..|
T Consensus 236 dHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~--~AH~gsevcSa~F 313 (430)
T KOG0640|consen 236 DHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIG--NAHGGSEVCSAVF 313 (430)
T ss_pred CCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHH--hhcCCceeeeEEE
Confidence 3457899999988765543 3689999999999999999999999999999976655544111 1111234556678
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
..++.+++.+| .|..+++|.+
T Consensus 314 tkn~kyiLsSG--------~DS~vkLWEi 334 (430)
T KOG0640|consen 314 TKNGKYILSSG--------KDSTVKLWEI 334 (430)
T ss_pred ccCCeEEeecC--------Ccceeeeeee
Confidence 99999988764 8999999986
No 149
>KOG0639|consensus
Probab=99.16 E-value=4.8e-11 Score=77.57 Aligned_cols=58 Identities=12% Similarity=0.051 Sum_probs=54.5
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCC
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYP 59 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~ 59 (111)
+...||-|.|||+.....+..|+||+..+.||..++||..|=+|+.|.+++.||++.+
T Consensus 526 sccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlreg 583 (705)
T KOG0639|consen 526 SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREG 583 (705)
T ss_pred eeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhh
Confidence 3568999999999999999999999999999999999999999999999999999864
No 150
>KOG2048|consensus
Probab=99.13 E-value=2e-09 Score=71.77 Aligned_cols=100 Identities=11% Similarity=0.087 Sum_probs=79.5
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
++.-+|.|.-||+.+++++..+....+.|+.++.+|.+..++.|++||.++.++...........-.+. -+.+.+++|
T Consensus 85 S~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq--~sRvLslsw 162 (691)
T KOG2048|consen 85 SSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQ--KSRVLSLSW 162 (691)
T ss_pred eecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccc--cceEEEEEe
Confidence 456789999999999999999998899999999999999999999999888888877665442111111 134556788
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|++..+ +.| +.|+.|++||+.
T Consensus 163 ~~~~~~i-~~G-------s~Dg~Iriwd~~ 184 (691)
T KOG2048|consen 163 NPTGTKI-AGG-------SIDGVIRIWDVK 184 (691)
T ss_pred cCCccEE-Eec-------ccCceEEEEEcC
Confidence 8888776 556 889999999974
No 151
>KOG1007|consensus
Probab=99.13 E-value=2.5e-10 Score=69.84 Aligned_cols=98 Identities=16% Similarity=0.181 Sum_probs=69.6
Q ss_pred ccccCeeeecCCCCcee-eeeee-----cccccEEEEEEcC--CCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecC
Q psy8803 3 SWYEEYKRLDYHTPIVE-TEVLT-----QHTHQVLHVSFSH--NGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWK 74 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~-~~~~~-----~~~~~v~~i~~s~--~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 74 (111)
+-.|..|.+|+...... +..+. +|......-+|+| +++.+++.+ |+++..||+++..... ++......
T Consensus 140 sm~dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~-d~tl~~~D~RT~~~~~---sI~dAHgq 215 (370)
T KOG1007|consen 140 SMDDNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTS-DSTLQFWDLRTMKKNN---SIEDAHGQ 215 (370)
T ss_pred EeccCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeC-CCcEEEEEccchhhhc---chhhhhcc
Confidence 34578899999976644 22221 3566777888998 578887776 6899999999754332 23322223
Q ss_pred ceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 75 YTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.+..+.|+|...++++++ +.|+.|+|||.|
T Consensus 216 ~vrdlDfNpnkq~~lvt~-------gDdgyvriWD~R 245 (370)
T KOG1007|consen 216 RVRDLDFNPNKQHILVTC-------GDDGYVRIWDTR 245 (370)
T ss_pred eeeeccCCCCceEEEEEc-------CCCccEEEEecc
Confidence 345667899999999999 889999999986
No 152
>KOG0641|consensus
Probab=99.12 E-value=1.8e-09 Score=64.43 Aligned_cols=93 Identities=15% Similarity=0.117 Sum_probs=73.5
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCce--------eeeecceeeeec
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSK--------VKYSHDMKTFSW 73 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~--------~~~~~~~~~~~~ 73 (111)
++--|..+.+||++-+.++..+..|...|.|+.|+|...++++++.|.+|++-|+..... ..|..++-
T Consensus 248 sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i---- 323 (350)
T KOG0641|consen 248 SGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAI---- 323 (350)
T ss_pred eccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceE----
Confidence 456688999999999999999999999999999999999999999999999999975321 11333332
Q ss_pred CceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 74 KYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 74 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.+.|+|.+-.++. . +.|.++.+|-+
T Consensus 324 ----~~rwh~~d~sfis-s-------sadkt~tlwa~ 348 (350)
T KOG0641|consen 324 ----QCRWHPQDFSFIS-S-------SADKTATLWAL 348 (350)
T ss_pred ----EEEecCccceeee-c-------cCcceEEEecc
Confidence 3456777666544 3 67999999975
No 153
>KOG0649|consensus
Probab=99.12 E-value=1.5e-09 Score=65.18 Aligned_cols=60 Identities=15% Similarity=0.026 Sum_probs=53.2
Q ss_pred cccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~ 63 (111)
..|+.+.-||+++|+....++||++.|-++.--.....+++|++||++++||.++.+...
T Consensus 133 gGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~ 192 (325)
T KOG0649|consen 133 GGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVS 192 (325)
T ss_pred cCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeE
Confidence 478999999999999999999999999999886666678899999999999999876554
No 154
>KOG1310|consensus
Probab=99.11 E-value=4.5e-10 Score=73.86 Aligned_cols=104 Identities=12% Similarity=0.042 Sum_probs=76.4
Q ss_pred CcccccCeeeecCCCCceeeeee-ecccccEEEEEEcCC--CcEEEEEeCCCeEEEEecCCCcee--eeecce----eee
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVL-TQHTHQVLHVSFSHN--GRYFATCSKDGYILVWTSSYPSKV--KYSHDM----KTF 71 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~-~~~~~~v~~i~~s~~--~~~l~s~~~d~~i~iw~~~~~~~~--~~~~~~----~~~ 71 (111)
++++.|..+-|||....++++.+ ++|...|.++.|-|. .+++++|..|..|+++|+...+.. -|.... ...
T Consensus 66 ~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~c 145 (758)
T KOG1310|consen 66 ASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSC 145 (758)
T ss_pred eecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhh
Confidence 46888999999999988888777 589999999999995 578999999999999999752211 111111 111
Q ss_pred ecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 72 SWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 72 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
....+.-++-.|.+...+-++ +.||+|+.+|+|
T Consensus 146 ht~rVKria~~p~~Phtfwsa-------sEDGtirQyDiR 178 (758)
T KOG1310|consen 146 HTDRVKRIATAPNGPHTFWSA-------SEDGTIRQYDIR 178 (758)
T ss_pred hhhhhhheecCCCCCceEEEe-------cCCcceeeeccc
Confidence 112333456677776766776 899999999986
No 155
>KOG2919|consensus
Probab=99.10 E-value=5.6e-10 Score=69.25 Aligned_cols=97 Identities=23% Similarity=0.318 Sum_probs=70.8
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEe-CCCeEEEEecCCCceee-----eecceeeeecC
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCS-KDGYILVWTSSYPSKVK-----YSHDMKTFSWK 74 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~-~d~~i~iw~~~~~~~~~-----~~~~~~~~~~~ 74 (111)
|.+++-.++-||.-....++..+.+|.+.|..+.|.++|+.|.+|. .+.+|..||++....+. |...
T Consensus 224 a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~------- 296 (406)
T KOG2919|consen 224 AVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGD------- 296 (406)
T ss_pred eeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccC-------
Confidence 3456777777888777788888899999999999999999888876 47799999998743221 2211
Q ss_pred ceeeEEEcc-CCCEEEEeccccCCccccCceEEEeecC
Q psy8803 75 YTQYSQFNE-SDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 75 ~~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.-|-|-|.- +...++++| +.+|.|++||++
T Consensus 297 TNQRI~FDld~~~~~LasG-------~tdG~V~vwdlk 327 (406)
T KOG2919|consen 297 TNQRILFDLDPKGEILASG-------DTDGSVRVWDLK 327 (406)
T ss_pred ccceEEEecCCCCceeecc-------CCCccEEEEecC
Confidence 112333433 333556877 899999999974
No 156
>KOG0646|consensus
Probab=99.09 E-value=2e-09 Score=69.09 Aligned_cols=100 Identities=15% Similarity=0.116 Sum_probs=75.7
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCc--ee------e--eeccee--
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPS--KV------K--YSHDMK-- 69 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~--~~------~--~~~~~~-- 69 (111)
|++-|.++++||+..+..+.++. ....+.++..+|-.+.+..|.++|.|.+.++.... .. . +...++
T Consensus 193 TaS~D~t~k~wdlS~g~LLlti~-fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~ 271 (476)
T KOG0646|consen 193 TASEDRTIKLWDLSLGVLLLTIT-FPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVL 271 (476)
T ss_pred EecCCceEEEEEeccceeeEEEe-cCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeee
Confidence 67889999999999998888776 56789999999999999999999999999886422 11 0 111111
Q ss_pred -eee-cCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 70 -TFS-WKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 70 -~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
... -+++++++.+-++.. +.+| +.||+++|||+
T Consensus 272 ~Gh~~~~~ITcLais~Dgtl-LlSG-------d~dg~VcvWdi 306 (476)
T KOG0646|consen 272 VGHENESAITCLAISTDGTL-LLSG-------DEDGKVCVWDI 306 (476)
T ss_pred ccccCCcceeEEEEecCccE-EEee-------CCCCCEEEEec
Confidence 111 136778888877766 4777 89999999996
No 157
>KOG1538|consensus
Probab=99.09 E-value=1.5e-09 Score=73.01 Aligned_cols=70 Identities=19% Similarity=0.281 Sum_probs=56.6
Q ss_pred cCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCce--eeeecceeeeecCc
Q psy8803 6 EEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSK--VKYSHDMKTFSWKY 75 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~--~~~~~~~~~~~~~~ 75 (111)
+..+.+||.+.|..+..+++|...|+|++|+.||..+++|+.|+.+.+|...-.-. ..|...+.|+.+.|
T Consensus 32 g~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH~D~IQCMsFNP 103 (1081)
T KOG1538|consen 32 GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSHNDAIQCMSFNP 103 (1081)
T ss_pred CCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccceeeeccCCeeeEeecCc
Confidence 45688999999999999999999999999999999999999999999998754222 22545555555444
No 158
>KOG1034|consensus
Probab=99.09 E-value=3.7e-10 Score=70.03 Aligned_cols=57 Identities=26% Similarity=0.353 Sum_probs=52.4
Q ss_pred cccccCeeeecCCCCceeeeee---ecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVL---TQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~---~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
+.+.|.+||+|++.+..++..| ++|.+.|..+.|++++..|++++.|.+|++|++..
T Consensus 153 s~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~ 212 (385)
T KOG1034|consen 153 SASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNV 212 (385)
T ss_pred EecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecCh
Confidence 4688999999999999888877 47999999999999999999999999999999983
No 159
>KOG0300|consensus
Probab=99.08 E-value=3.2e-10 Score=70.40 Aligned_cols=54 Identities=20% Similarity=0.210 Sum_probs=51.8
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEe
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWT 55 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~ 55 (111)
+.+-|.+-+||.+++++++..+.||.+.|.++.|++.+.++++++.|++-.||.
T Consensus 165 tASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~ 218 (481)
T KOG0300|consen 165 TASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWK 218 (481)
T ss_pred ecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHH
Confidence 567899999999999999999999999999999999999999999999999997
No 160
>KOG0322|consensus
Probab=99.07 E-value=9.5e-11 Score=70.80 Aligned_cols=56 Identities=25% Similarity=0.322 Sum_probs=53.9
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEec
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTS 56 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~ 56 (111)
||.+||+.||+|.-++..++..++-|.+.|.+++|+|+..+++.++.|.+|.+|++
T Consensus 267 ATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 267 ATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred eecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 68899999999999999999999999999999999999999999999999999986
No 161
>KOG0646|consensus
Probab=99.07 E-value=7.7e-10 Score=70.98 Aligned_cols=92 Identities=21% Similarity=0.259 Sum_probs=69.2
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCC---------ceee----eecceeee
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYP---------SKVK----YSHDMKTF 71 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~---------~~~~----~~~~~~~~ 71 (111)
-.|.+.+|.+.+|+++..+.+|=..|.|+.|+-|+.+|++|+.||.+.+|++-.. .+.+ |.-++..+
T Consensus 101 i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl 180 (476)
T KOG0646|consen 101 ISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDL 180 (476)
T ss_pred ccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEE
Confidence 5678999999999999999999999999999999999999999999999987431 1111 33333333
Q ss_pred ecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 72 SWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 72 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.. .+.+...++ .+. +.|+++++||+
T Consensus 181 ~i------g~Gg~~~rl-~Ta-------S~D~t~k~wdl 205 (476)
T KOG0646|consen 181 QI------GSGGTNARL-YTA-------SEDRTIKLWDL 205 (476)
T ss_pred Ee------cCCCccceE-EEe-------cCCceEEEEEe
Confidence 22 233333454 444 78999999997
No 162
>KOG1273|consensus
Probab=99.07 E-value=8.3e-10 Score=68.34 Aligned_cols=70 Identities=19% Similarity=0.218 Sum_probs=56.4
Q ss_pred EEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEee
Q psy8803 30 VLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 30 v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
..|+.|++-|.+||.|+.||.+-|||+.+..... +......|+++++|++++..++++ +.|..|.+||
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar----~lsaH~~pi~sl~WS~dgr~Llts--------S~D~si~lwD 93 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIAR----MLSAHVRPITSLCWSRDGRKLLTS--------SRDWSIKLWD 93 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhh----hhhccccceeEEEecCCCCEeeee--------cCCceeEEEe
Confidence 7899999999999999999999999998755332 222223577788889999887663 7899999999
Q ss_pred cC
Q psy8803 110 LQ 111 (111)
Q Consensus 110 ~~ 111 (111)
+.
T Consensus 94 l~ 95 (405)
T KOG1273|consen 94 LL 95 (405)
T ss_pred cc
Confidence 74
No 163
>KOG0299|consensus
Probab=99.05 E-value=1.3e-09 Score=69.92 Aligned_cols=97 Identities=19% Similarity=0.192 Sum_probs=69.2
Q ss_pred ccccCeeeecCCCCceee----ee------------e--ecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeee
Q psy8803 3 SWYEEYKRLDYHTPIVET----EV------------L--TQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKY 64 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~----~~------------~--~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~ 64 (111)
.+.|++|.=|++.+++.. .+ . ++|.+.+.+++.++|+++|++|+.|..+.||+.++....+.
T Consensus 160 ask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~ 239 (479)
T KOG0299|consen 160 ASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKV 239 (479)
T ss_pred cCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhc
Confidence 467888888888766421 00 0 36888999999999999999999999999999998765541
Q ss_pred ecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 65 SHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 65 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
....-..+.+++|......+ .++ +.|+.|++|+++
T Consensus 240 ----~~ghr~~V~~L~fr~gt~~l-ys~-------s~Drsvkvw~~~ 274 (479)
T KOG0299|consen 240 ----FKGHRGAVSSLAFRKGTSEL-YSA-------SADRSVKVWSID 274 (479)
T ss_pred ----ccccccceeeeeeecCccce-eee-------ecCCceEEEehh
Confidence 11111344456666655554 334 789999999863
No 164
>KOG4328|consensus
Probab=99.05 E-value=3.7e-10 Score=72.41 Aligned_cols=100 Identities=16% Similarity=0.108 Sum_probs=72.5
Q ss_pred cccccCeeeecCCCCce--eeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 2 KSWYEEYKRLDYHTPIV--ETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
++++||+|++-|++.+. .+..+..-...+..+.|+.+...++.+..-|...+||.+........ .. +.-..+.++
T Consensus 252 ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~--~~-lh~kKI~sv 328 (498)
T KOG4328|consen 252 SSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYEN--LR-LHKKKITSV 328 (498)
T ss_pred eeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchh--hh-hhhccccee
Confidence 57999999999998663 34344334456677888888777777777779999999976442210 11 111244578
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+++|...++++++ +.|++.+|||+|
T Consensus 329 ~~NP~~p~~laT~-------s~D~T~kIWD~R 353 (498)
T KOG4328|consen 329 ALNPVCPWFLATA-------SLDQTAKIWDLR 353 (498)
T ss_pred ecCCCCchheeec-------ccCcceeeeehh
Confidence 8899888888988 999999999986
No 165
>KOG2394|consensus
Probab=99.04 E-value=6.2e-10 Score=72.81 Aligned_cols=79 Identities=16% Similarity=0.295 Sum_probs=61.2
Q ss_pred eeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCcc
Q psy8803 20 TEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQ 99 (111)
Q Consensus 20 ~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 99 (111)
+..+.--++.|...+|+|||++||+.++|+.++|||..+.+... +-...+....+|+|+|++.+| ++|
T Consensus 283 v~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg----~mkSYFGGLLCvcWSPDGKyI-vtG------- 350 (636)
T KOG2394|consen 283 VARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLG----VMKSYFGGLLCVCWSPDGKYI-VTG------- 350 (636)
T ss_pred cceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHH----HHHhhccceEEEEEcCCccEE-Eec-------
Confidence 33333345688899999999999999999999999998766554 222334667788999999887 556
Q ss_pred ccCceEEEeec
Q psy8803 100 STSGEIAVFSL 110 (111)
Q Consensus 100 ~~~~~i~iw~~ 110 (111)
+.|.-|.||.+
T Consensus 351 GEDDLVtVwSf 361 (636)
T KOG2394|consen 351 GEDDLVTVWSF 361 (636)
T ss_pred CCcceEEEEEe
Confidence 78889999976
No 166
>KOG1446|consensus
Probab=99.04 E-value=4.5e-09 Score=64.64 Aligned_cols=98 Identities=15% Similarity=0.131 Sum_probs=73.9
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeC--CCeEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSK--DGYILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
+++.|.+++|||..+++.+..+..+...+-.++|-+....+..++. |.+|+..++.+.+.+.+- ..+. ..++.+
T Consensus 31 tss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylRYF---~GH~-~~V~sL 106 (311)
T KOG1446|consen 31 TSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLRYF---PGHK-KRVNSL 106 (311)
T ss_pred EecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceEEEc---CCCC-ceEEEE
Confidence 5678889999999999999998877778888899776655555544 889999999988877621 1111 344566
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+.+|-+..+ .++ +.|++|++||+|
T Consensus 107 ~~sP~~d~F-lS~-------S~D~tvrLWDlR 130 (311)
T KOG1446|consen 107 SVSPKDDTF-LSS-------SLDKTVRLWDLR 130 (311)
T ss_pred EecCCCCeE-Eec-------ccCCeEEeeEec
Confidence 678877555 555 789999999987
No 167
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.03 E-value=1.5e-08 Score=64.01 Aligned_cols=98 Identities=23% Similarity=0.310 Sum_probs=74.9
Q ss_pred ccccCeeeecCCCC-ceeeeeeecccccEEEEEEcCCCcEEEEEeC-CCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 3 SWYEEYKRLDYHTP-IVETEVLTQHTHQVLHVSFSHNGRYFATCSK-DGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 3 ~~~d~~i~iw~~~~-~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
+..|+.+++|+... ......+..|...|..+.|+|++..++.++. ++.+++|+......... ... .-..+..++
T Consensus 130 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~v~~~~ 205 (466)
T COG2319 130 SSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLST---LAG-HTDPVSSLA 205 (466)
T ss_pred CCCCccEEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEe---ecc-CCCceEEEE
Confidence 44589999999997 7888888999999999999999998888885 99999999987433331 111 113556777
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|.+..+++++ +.++.|++||.+
T Consensus 206 ~~~~~~~~~~~~-------~~d~~i~~wd~~ 229 (466)
T COG2319 206 FSPDGGLLIASG-------SSDGTIRLWDLS 229 (466)
T ss_pred EcCCcceEEEEe-------cCCCcEEEEECC
Confidence 887776555655 678999999753
No 168
>KOG2919|consensus
Probab=99.03 E-value=3e-09 Score=66.10 Aligned_cols=57 Identities=14% Similarity=0.022 Sum_probs=45.0
Q ss_pred CcccccCeeeecCCCCceeeeeeec--cccc---EEEEEEcCCCcEEEEEeCCCeEEEEec-CC
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQ--HTHQ---VLHVSFSHNGRYFATCSKDGYILVWTS-SY 58 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~--~~~~---v~~i~~s~~~~~l~s~~~d~~i~iw~~-~~ 58 (111)
|+|+-|.-|+|||..+|+....+.+ |... ..+++|+|||..|.+|- +.+|++||+ +.
T Consensus 127 a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~Rp 189 (406)
T KOG2919|consen 127 AVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRP 189 (406)
T ss_pred eeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecc-cceEEEeeccCC
Confidence 5678889999999999987766654 4333 45799999999887765 679999999 44
No 169
>KOG1272|consensus
Probab=99.02 E-value=3.3e-10 Score=72.92 Aligned_cols=99 Identities=4% Similarity=0.063 Sum_probs=81.8
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++..|.++.-|+..|+.+..+..-.+.+..+.-.|-.-.+-.|..+|++.+|......++. .+.|.. +++.+++
T Consensus 225 ~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLv---KiLcH~-g~V~siA 300 (545)
T KOG1272|consen 225 VAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLV---KILCHR-GPVSSIA 300 (545)
T ss_pred eecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHH---HHHhcC-CCcceEE
Confidence 456778999999999999998887777888888888888889999999999999988766554 344444 5777888
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+.+.+.+++++| .|+.++|||+|
T Consensus 301 v~~~G~YMaTtG--------~Dr~~kIWDlR 323 (545)
T KOG1272|consen 301 VDRGGRYMATTG--------LDRKVKIWDLR 323 (545)
T ss_pred ECCCCcEEeecc--------cccceeEeeec
Confidence 999999987764 79999999987
No 170
>KOG2096|consensus
Probab=98.99 E-value=2.6e-09 Score=66.36 Aligned_cols=99 Identities=13% Similarity=0.140 Sum_probs=73.2
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCc--eeeeecce---eeeecCce
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPS--KVKYSHDM---KTFSWKYT 76 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~--~~~~~~~~---~~~~~~~~ 76 (111)
+.+-|..|.||+.+ |+.+..+...+..-...+.||+|+.++.++--.-+++|.+-..+ .++....+ ..+. +.+
T Consensus 204 sas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~-saV 281 (420)
T KOG2096|consen 204 SASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQ-SAV 281 (420)
T ss_pred EecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccch-hhe
Confidence 45678999999999 98888887777777788999999999999877789999874221 11111111 1221 356
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
...+|+++...+++ . +.||+++|||.
T Consensus 282 ~~~aFsn~S~r~vt-v-------SkDG~wriwdt 307 (420)
T KOG2096|consen 282 LAAAFSNSSTRAVT-V-------SKDGKWRIWDT 307 (420)
T ss_pred eeeeeCCCcceeEE-E-------ecCCcEEEeec
Confidence 67899999888754 4 89999999996
No 171
>KOG0322|consensus
Probab=98.98 E-value=2.7e-09 Score=64.63 Aligned_cols=96 Identities=15% Similarity=0.101 Sum_probs=65.7
Q ss_pred ccccCeeeecCCCC--ceeee--eeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceee
Q psy8803 3 SWYEEYKRLDYHTP--IVETE--VLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQY 78 (111)
Q Consensus 3 ~~~d~~i~iw~~~~--~~~~~--~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (111)
++-+.++-+|.+.- +.+.. .++--.-.|..+..-||++.+++++-|++|++|..++...+. +....-..+++
T Consensus 223 gga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLA----VLkyHsagvn~ 298 (323)
T KOG0322|consen 223 GGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLA----VLKYHSAGVNA 298 (323)
T ss_pred CCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchh----hhhhhhcceeE
Confidence 34455666677652 22211 111123357788899999999999999999999999876554 11111145678
Q ss_pred EEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 79 SQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
++|+|+.+.+ +++ +.|..|.+|++
T Consensus 299 vAfspd~~lm-Aaa-------skD~rISLWkL 322 (323)
T KOG0322|consen 299 VAFSPDCELM-AAA-------SKDARISLWKL 322 (323)
T ss_pred EEeCCCCchh-hhc-------cCCceEEeeec
Confidence 8899887665 555 89999999986
No 172
>KOG2048|consensus
Probab=98.96 E-value=1.1e-08 Score=68.46 Aligned_cols=97 Identities=21% Similarity=0.263 Sum_probs=69.9
Q ss_pred CcccccCeeeecCCCCceeee--eeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee-e-------ecceee
Q psy8803 1 KKSWYEEYKRLDYHTPIVETE--VLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK-Y-------SHDMKT 70 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~--~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~-~-------~~~~~~ 70 (111)
++++.||.+.+.++.+++..+ .|...++.|.+++|+|++..|++|+.|+.|++||...+...+ + ...-.+
T Consensus 126 ~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~ 205 (691)
T KOG2048|consen 126 AIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPT 205 (691)
T ss_pred EeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCce
Confidence 356789988888888876443 334457999999999999999999999999999998865544 1 111233
Q ss_pred eecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 71 FSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 71 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+.|+ |.|-.+ .. +++| ...|+|.+||-
T Consensus 206 iVWS----v~~Lrd-~t-I~sg-------DS~G~V~FWd~ 232 (691)
T KOG2048|consen 206 IVWS----VLFLRD-ST-IASG-------DSAGTVTFWDS 232 (691)
T ss_pred EEEE----EEEeec-Cc-EEEe-------cCCceEEEEcc
Confidence 4453 555533 34 4666 77888999984
No 173
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.96 E-value=2.6e-08 Score=58.85 Aligned_cols=93 Identities=15% Similarity=0.243 Sum_probs=59.1
Q ss_pred CeeeecCCCC-ceeeeeeec-ccccEEEEEEcCCCcEEEEE--eCCCeEEEEecCCCceeeeecceeeeecCceeeEEEc
Q psy8803 7 EYKRLDYHTP-IVETEVLTQ-HTHQVLHVSFSHNGRYFATC--SKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFN 82 (111)
Q Consensus 7 ~~i~iw~~~~-~~~~~~~~~-~~~~v~~i~~s~~~~~l~s~--~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 82 (111)
+...+|.++. +.....+.- ..+.|.+++|+|+++.|+.. ..+..+.+||++...... ..-.+.+.+.|+
T Consensus 37 ~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~~~~i~~-------~~~~~~n~i~ws 109 (194)
T PF08662_consen 37 GEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVKGKKIFS-------FGTQPRNTISWS 109 (194)
T ss_pred eeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCcccEeEe-------ecCCCceEEEEC
Confidence 3445555532 233333332 34579999999999876554 457799999997322221 111355678999
Q ss_pred cCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 83 ESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|.+..++++|.+ ...|.|.+||++
T Consensus 110 P~G~~l~~~g~~-----n~~G~l~~wd~~ 133 (194)
T PF08662_consen 110 PDGRFLVLAGFG-----NLNGDLEFWDVR 133 (194)
T ss_pred CCCCEEEEEEcc-----CCCcEEEEEECC
Confidence 999998876511 224679999974
No 174
>KOG0280|consensus
Probab=98.95 E-value=1.4e-08 Score=62.43 Aligned_cols=100 Identities=16% Similarity=0.141 Sum_probs=71.7
Q ss_pred cccccCeeeecCCCCc--eeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCc-eeeeecceeeeecCcee
Q psy8803 2 KSWYEEYKRLDYHTPI--VETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPS-KVKYSHDMKTFSWKYTQ 77 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~--~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~~ 77 (111)
+|..+|.+.+-+.+.. +....+++|+-+++...|+.. -+++.+|++|+.+..||++.+. ..-+...+.. ..+.
T Consensus 138 vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~---~GV~ 214 (339)
T KOG0280|consen 138 VSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHT---SGVV 214 (339)
T ss_pred EEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeee---cceE
Confidence 3455666665455444 334478899999999999774 5789999999999999999432 2222222221 3455
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
++.-+|+..+.+++| +.|..|++||.|
T Consensus 215 SI~ss~~~~~~I~TG-------sYDe~i~~~DtR 241 (339)
T KOG0280|consen 215 SIYSSPPKPTYIATG-------SYDECIRVLDTR 241 (339)
T ss_pred EEecCCCCCceEEEe-------ccccceeeeehh
Confidence 666688888888999 999999999976
No 175
>KOG4328|consensus
Probab=98.93 E-value=8.6e-09 Score=66.32 Aligned_cols=99 Identities=19% Similarity=0.205 Sum_probs=66.3
Q ss_pred CcccccCeeeecCCCCc---e-eeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecC----CC---ceeeeeccee
Q psy8803 1 KKSWYEEYKRLDYHTPI---V-ETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSS----YP---SKVKYSHDMK 69 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~---~-~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~----~~---~~~~~~~~~~ 69 (111)
||++-|++.+|||.+.. . ++.....|...|.+..|||.+-.|++.+.|..|+|||.. .. ....|...
T Consensus 339 aT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~-- 416 (498)
T KOG4328|consen 339 ATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNNR-- 416 (498)
T ss_pred eecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceeeccCc--
Confidence 68899999999999854 2 233345699999999999987669999999999999984 11 12233211
Q ss_pred eeecCceeeEEEccCCCEEEEeccccCCccccCceEEEee
Q psy8803 70 TFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 70 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
...|-.....+|.|+..++ +.| ...+.|-|+|
T Consensus 417 t~RwlT~fKA~W~P~~~li-~vg-------~~~r~IDv~~ 448 (498)
T KOG4328|consen 417 TGRWLTPFKAAWDPDYNLI-VVG-------RYPRPIDVFD 448 (498)
T ss_pred ccccccchhheeCCCccEE-EEe-------ccCcceeEEc
Confidence 1122222345677766554 555 4555566665
No 176
>KOG1524|consensus
Probab=98.93 E-value=1.4e-09 Score=71.37 Aligned_cols=100 Identities=13% Similarity=0.217 Sum_probs=71.5
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCC---ceeeeecceeeeecCc---
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYP---SKVKYSHDMKTFSWKY--- 75 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~---~~~~~~~~~~~~~~~~--- 75 (111)
.+++||...|.+-. ++......+|.+.+.+-.|+|||.-|+++++||.|++|.-..- ...+...++++..|.|
T Consensus 80 i~s~DGkf~il~k~-~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S~ 158 (737)
T KOG1524|consen 80 ICSNDGRFVILNKS-ARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAPNSN 158 (737)
T ss_pred EEcCCceEEEeccc-chhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEECCCCC
Confidence 46788888886644 6666677899999999999999999999999999999975431 1112222444444443
Q ss_pred ------------------------------eeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 76 ------------------------------TQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 76 ------------------------------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+.++.|++....+ ++| +.|-..+|||-
T Consensus 159 ~vl~c~g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI-~sg-------GED~kfKvWD~ 215 (737)
T KOG1524|consen 159 SIVFCQGGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNII-ASG-------GEDFRFKIWDA 215 (737)
T ss_pred ceEEecCCeEEEeecccccceeEEeccCcEEEEeecCccccce-eec-------CCceeEEeecc
Confidence 2456777766554 666 78888999983
No 177
>KOG0650|consensus
Probab=98.92 E-value=1.9e-08 Score=66.88 Aligned_cols=64 Identities=20% Similarity=0.224 Sum_probs=50.4
Q ss_pred eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCC
Q psy8803 18 VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDT 86 (111)
Q Consensus 18 ~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 86 (111)
.+-..+.||++.|.+++.+|.|.+|++|+.||+++||.+.++.++.+..-. +.+++|+|+|...
T Consensus 391 ~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d-----~~I~~vaw~P~~~ 454 (733)
T KOG0650|consen 391 RCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFD-----SEIRSVAWNPLSD 454 (733)
T ss_pred eeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeec-----ceeEEEEecCCCC
Confidence 344456799999999999999999999999999999999999887642211 3455677777443
No 178
>KOG0639|consensus
Probab=98.91 E-value=2.8e-09 Score=69.61 Aligned_cols=94 Identities=15% Similarity=0.194 Sum_probs=67.7
Q ss_pred cccccCeeeecCCCCceeeee--eecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee----eecceeeeecCc
Q psy8803 2 KSWYEEYKRLDYHTPIVETEV--LTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK----YSHDMKTFSWKY 75 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~--~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~~~~~~~ 75 (111)
++..-.++.|||+..-.+... +....-.+++++.+||.++.+++..||.|.|||+.+...+. |.....+
T Consensus 482 vGGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGasc----- 556 (705)
T KOG0639|consen 482 VGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC----- 556 (705)
T ss_pred eccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCcee-----
Confidence 345567899999975543332 23333467788999999999999999999999999865444 4444444
Q ss_pred eeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 76 TQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+..++++..|.+ | +-|++|+-||+|
T Consensus 557 ---Idis~dGtklWT-G-------GlDntvRcWDlr 581 (705)
T KOG0639|consen 557 ---IDISKDGTKLWT-G-------GLDNTVRCWDLR 581 (705)
T ss_pred ---EEecCCCceeec-C-------CCccceeehhhh
Confidence 445667877755 4 679999999986
No 179
>KOG0771|consensus
Probab=98.90 E-value=5.5e-09 Score=66.30 Aligned_cols=61 Identities=16% Similarity=0.240 Sum_probs=53.7
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCcee
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKV 62 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~ 62 (111)
|+..-||++|+|+..+...+.....|.+.|.++.|+|||+.|++-+.| ..+||+.+++...
T Consensus 160 atgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~ 220 (398)
T KOG0771|consen 160 ATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAAL 220 (398)
T ss_pred eeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchh
Confidence 467789999999988777777778899999999999999999999998 9999999987433
No 180
>KOG1274|consensus
Probab=98.89 E-value=2.7e-08 Score=68.52 Aligned_cols=99 Identities=17% Similarity=0.182 Sum_probs=76.9
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++.+++|+.|.+.+++.--.+...+-++.+++++-+|.+++.|++|-.|++-++.+.....+ .+.+. .++.++.
T Consensus 70 ~~~s~~~tv~~y~fps~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~---lrgh~-apVl~l~ 145 (933)
T KOG1274|consen 70 LTGSEQNTVLRYKFPSGEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKV---LRGHD-APVLQLS 145 (933)
T ss_pred EEeeccceEEEeeCCCCCccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchhee---ecccC-Cceeeee
Confidence 3678899999999988765555555667899999999999999999999999999976543332 12222 4666778
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|.+..++++ +.+|.|+|||++
T Consensus 146 ~~p~~~fLAvs--------s~dG~v~iw~~~ 168 (933)
T KOG1274|consen 146 YDPKGNFLAVS--------SCDGKVQIWDLQ 168 (933)
T ss_pred EcCCCCEEEEE--------ecCceEEEEEcc
Confidence 89999888765 569999999975
No 181
>KOG0290|consensus
Probab=98.89 E-value=2.1e-08 Score=61.68 Aligned_cols=93 Identities=14% Similarity=0.185 Sum_probs=67.7
Q ss_pred cccCeeeecCCCCce----eeeee-----ecccccEEEEEEcC-CCcEEEEEeCCCeEEEEecCCCce-------eeeec
Q psy8803 4 WYEEYKRLDYHTPIV----ETEVL-----TQHTHQVLHVSFSH-NGRYFATCSKDGYILVWTSSYPSK-------VKYSH 66 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~----~~~~~-----~~~~~~v~~i~~s~-~~~~l~s~~~d~~i~iw~~~~~~~-------~~~~~ 66 (111)
..+..+|+|-+...+ +...+ ..+...+....|.. |-++|.+++-|.++.|||++.+.. ..|..
T Consensus 118 Ts~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDK 197 (364)
T KOG0290|consen 118 TSSDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDK 197 (364)
T ss_pred cccCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCc
Confidence 345689999987431 11112 23567888889977 578999999999999999987522 22444
Q ss_pred ceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 67 DMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 67 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
++ ..++|...+..++++. +.||.+|++|||
T Consensus 198 EV--------~DIaf~~~s~~~FASv-------gaDGSvRmFDLR 227 (364)
T KOG0290|consen 198 EV--------YDIAFLKGSRDVFASV-------GADGSVRMFDLR 227 (364)
T ss_pred ce--------eEEEeccCccceEEEe-------cCCCcEEEEEec
Confidence 44 4566677777888887 889999999997
No 182
>KOG0307|consensus
Probab=98.88 E-value=3.1e-09 Score=74.20 Aligned_cols=94 Identities=18% Similarity=0.255 Sum_probs=74.7
Q ss_pred CeeeecCCCCc-eeeeeeecccccEEEEEEcCCC-cEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 7 EYKRLDYHTPI-VETEVLTQHTHQVLHVSFSHNG-RYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 7 ~~i~iw~~~~~-~~~~~~~~~~~~v~~i~~s~~~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
-.|++||++.- .++..+++|+..|.++.|++.+ +++++++.|+++.+|+.++++.+..... .. ..+..|.|.|.
T Consensus 232 PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~--~~--nW~fdv~w~pr 307 (1049)
T KOG0307|consen 232 PVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPA--QG--NWCFDVQWCPR 307 (1049)
T ss_pred ceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCC--CC--cceeeeeecCC
Confidence 45999999853 5777788999999999999965 8999999999999999999887763211 11 23456788898
Q ss_pred CCEEEEeccccCCccccCceEEEeecC
Q psy8803 85 DTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
...++++. +.+|.|.|+.++
T Consensus 308 ~P~~~A~a-------sfdgkI~I~sl~ 327 (1049)
T KOG0307|consen 308 NPSVMAAA-------SFDGKISIYSLQ 327 (1049)
T ss_pred Ccchhhhh-------eeccceeeeeee
Confidence 88777776 899999999763
No 183
>KOG0644|consensus
Probab=98.86 E-value=8e-10 Score=75.57 Aligned_cols=90 Identities=16% Similarity=0.162 Sum_probs=74.8
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee----eecceeeeecCcee
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK----YSHDMKTFSWKYTQ 77 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~~~~~~~~~ 77 (111)
+++.|-.++||...+..++....||.+.+..++.+....++++++.|..|++|-+..+..+. |.+ .++
T Consensus 207 tgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtg--------avt 278 (1113)
T KOG0644|consen 207 TGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTG--------AVT 278 (1113)
T ss_pred ecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhcccc--------cee
Confidence 57788999999999999999999999999999999989999999999999999998865443 443 445
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.++|+|-. +. +.|++++|||.|
T Consensus 279 aiafsP~~-----ss-------s~dgt~~~wd~r 300 (1113)
T KOG0644|consen 279 AIAFSPRA-----SS-------SDDGTCRIWDAR 300 (1113)
T ss_pred eeccCccc-----cC-------CCCCceEecccc
Confidence 56677754 33 779999999965
No 184
>KOG2055|consensus
Probab=98.85 E-value=5.2e-08 Score=62.97 Aligned_cols=55 Identities=18% Similarity=0.094 Sum_probs=44.5
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEE--EEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVL--HVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~--~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
++.+|-|.+||+++..+++++.. ++.|. .++.++++++||+|+..|.+.|||..+
T Consensus 362 ~~~~GeV~v~nl~~~~~~~rf~D-~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s 418 (514)
T KOG2055|consen 362 SGGTGEVYVWNLRQNSCLHRFVD-DGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNS 418 (514)
T ss_pred EcCCceEEEEecCCcceEEEEee-cCccceeeeeecCCCceEEeccCcceEEEeccch
Confidence 56688999999999998888863 33333 456678999999999999999999653
No 185
>KOG1188|consensus
Probab=98.85 E-value=1.6e-08 Score=63.12 Aligned_cols=92 Identities=11% Similarity=0.127 Sum_probs=65.4
Q ss_pred ccCeeeecCCCCcee-eeee-ecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCcee-------eeecceeeeecC
Q psy8803 5 YEEYKRLDYHTPIVE-TEVL-TQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKV-------KYSHDMKTFSWK 74 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~-~~~~-~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~-------~~~~~~~~~~~~ 74 (111)
.|-.+.+||++..+. +..+ +.|..-|.++.|+|. -++|++|+.||.+.+||++..... .+..+|.
T Consensus 141 s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~----- 215 (376)
T KOG1188|consen 141 SDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIH----- 215 (376)
T ss_pred CceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceee-----
Confidence 467899999997755 5544 579999999999995 689999999999999999764221 1222333
Q ss_pred ceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 75 YTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.+.|..++..-+.+- +......+|+++
T Consensus 216 ---~igw~~~~ykrI~cl-------TH~Etf~~~ele 242 (376)
T KOG1188|consen 216 ---LIGWLSKKYKRIMCL-------THMETFAIYELE 242 (376)
T ss_pred ---eeeeecCCcceEEEE-------EccCceeEEEcc
Confidence 455566663334444 556678888864
No 186
>KOG2055|consensus
Probab=98.84 E-value=4.7e-08 Score=63.17 Aligned_cols=94 Identities=14% Similarity=0.116 Sum_probs=74.5
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeee---ecceeeeecCceee
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKY---SHDMKTFSWKYTQY 78 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~---~~~~~~~~~~~~~~ 78 (111)
..+..|+|.+.-..+++.+..++ ..+.|..++|+.|+..|+.++.+|.+.+||++...+.+. .+.+ ..++
T Consensus 320 ~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v------~gts 392 (514)
T KOG2055|consen 320 IAGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSV------HGTS 392 (514)
T ss_pred EcccCceEEeehhhhhhhhheee-eccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCcc------ceee
Confidence 34567889998888888888887 678999999999999988888899999999998766552 2222 2345
Q ss_pred EEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 79 SQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
++.++++.+ +++| +..|.|.|||.
T Consensus 393 ~~~S~ng~y-lA~G-------S~~GiVNIYd~ 416 (514)
T KOG2055|consen 393 LCISLNGSY-LATG-------SDSGIVNIYDG 416 (514)
T ss_pred eeecCCCce-EEec-------cCcceEEEecc
Confidence 677777775 5777 89999999985
No 187
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.83 E-value=3.1e-07 Score=59.28 Aligned_cols=95 Identities=14% Similarity=0.097 Sum_probs=69.3
Q ss_pred cccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEcc
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
..++.+.+.|..+.+.+..+......-..+.|+||++++..++.|+.+.++|+.+.+.... +... .....+++++
T Consensus 13 ~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~---i~~G--~~~~~i~~s~ 87 (369)
T PF02239_consen 13 RGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVAT---IKVG--GNPRGIAVSP 87 (369)
T ss_dssp GGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEE---EE-S--SEEEEEEE--
T ss_pred cCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEE---EecC--CCcceEEEcC
Confidence 4678999999999988888875433334567999999988889999999999999886652 3221 2345789999
Q ss_pred CCCEEEEeccccCCccccCceEEEeec
Q psy8803 84 SDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
++.+++++. -..+.+.|+|.
T Consensus 88 DG~~~~v~n-------~~~~~v~v~D~ 107 (369)
T PF02239_consen 88 DGKYVYVAN-------YEPGTVSVIDA 107 (369)
T ss_dssp TTTEEEEEE-------EETTEEEEEET
T ss_pred CCCEEEEEe-------cCCCceeEecc
Confidence 999998877 66788999885
No 188
>KOG2445|consensus
Probab=98.82 E-value=4e-08 Score=60.76 Aligned_cols=72 Identities=22% Similarity=0.387 Sum_probs=59.2
Q ss_pred ecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCC----ce----eeeecceeeeecCceeeEEEccCCCEEEEecccc
Q psy8803 24 TQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYP----SK----VKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHF 95 (111)
Q Consensus 24 ~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~----~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 95 (111)
.+|...|.++.|.+-|+-+++|+.|.+++|||.+.. .+ ..|.+.+..+.|. +|.-..+++++
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WA-------hPEfGqvvA~c--- 79 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWA-------HPEFGQVVATC--- 79 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEec-------CccccceEEEE---
Confidence 478899999999999999999999999999997542 11 1266677777775 67777888888
Q ss_pred CCccccCceEEEee
Q psy8803 96 GTPQSTSGEIAVFS 109 (111)
Q Consensus 96 ~~~~~~~~~i~iw~ 109 (111)
+.|+++.||.
T Consensus 80 ----S~Drtv~iWE 89 (361)
T KOG2445|consen 80 ----SYDRTVSIWE 89 (361)
T ss_pred ----ecCCceeeee
Confidence 9999999996
No 189
>KOG0650|consensus
Probab=98.81 E-value=1.3e-07 Score=63.01 Aligned_cols=53 Identities=8% Similarity=0.002 Sum_probs=40.8
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCc--EEEEEeCCCeEEEEe
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGR--YFATCSKDGYILVWT 55 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~--~l~s~~~d~~i~iw~ 55 (111)
|+++.||+++||.+.++.++.++. ..+.|.+++|.|.+. .|+.+- ..++.+-+
T Consensus 416 asGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~-~~~~~ivn 470 (733)
T KOG0650|consen 416 ASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAV-GECVLIVN 470 (733)
T ss_pred eecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEe-cCceEEeC
Confidence 578999999999999999999887 677999999999754 344443 33355554
No 190
>KOG1408|consensus
Probab=98.81 E-value=6e-08 Score=66.00 Aligned_cols=52 Identities=23% Similarity=0.359 Sum_probs=40.7
Q ss_pred eeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEe--CCCeEEEEecCCC
Q psy8803 8 YKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCS--KDGYILVWTSSYP 59 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~--~d~~i~iw~~~~~ 59 (111)
.|-++|.+....-+-+..|...+.+++|+++|+++++|- ....+++|++...
T Consensus 59 vVVlfn~~~~tQ~hlvnssRk~~t~vAfS~~GryvatGEcG~~pa~kVw~la~h 112 (1080)
T KOG1408|consen 59 VVVLFNVDSCTQSHLVNSSRKPLTCVAFSQNGRYVATGECGRTPASKVWSLAFH 112 (1080)
T ss_pred EEEEEcccccchhheecccCcceeEEEEcCCCcEEEecccCCCccceeeeeccc
Confidence 356677776555555556778999999999999999984 6778999999764
No 191
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.79 E-value=1.3e-07 Score=62.05 Aligned_cols=92 Identities=11% Similarity=0.153 Sum_probs=63.2
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCC---CeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKD---GYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
.+..+.+||..... ...+..+...+....|+|||+.|+..+.+ ..|.+||+.++...... ... ......+|
T Consensus 182 ~~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~-~~~----g~~~~~~w 255 (429)
T PRK01742 182 QPYEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVA-SFR----GHNGAPAF 255 (429)
T ss_pred ceEEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEe-cCC----CccCceeE
Confidence 35789999987443 55667788889999999999988887643 46999999876433211 111 11225789
Q ss_pred ccCCCEEEEeccccCCccccCceEEEee
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
+|++..++.+. +.++.+.||.
T Consensus 256 SPDG~~La~~~-------~~~g~~~Iy~ 276 (429)
T PRK01742 256 SPDGSRLAFAS-------SKDGVLNIYV 276 (429)
T ss_pred CCCCCEEEEEE-------ecCCcEEEEE
Confidence 99999887765 4455555553
No 192
>KOG2111|consensus
Probab=98.79 E-value=2.6e-08 Score=61.69 Aligned_cols=58 Identities=14% Similarity=0.154 Sum_probs=50.8
Q ss_pred CcccccCe-eeecCCCCceeeeeeec--ccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 1 KKSWYEEY-KRLDYHTPIVETEVLTQ--HTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 1 ~~~~~d~~-i~iw~~~~~~~~~~~~~--~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
||++..|| |||||..+|..+..+.. ....|++|+|||+..+|+.+++.|+++||.++.
T Consensus 197 ATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 197 ATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred EEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence 56677777 99999999998888862 356899999999999999999999999999976
No 193
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.77 E-value=2.9e-07 Score=58.20 Aligned_cols=95 Identities=27% Similarity=0.363 Sum_probs=69.6
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCc-EEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEcc
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGR-YFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
.|+.+++|+...+..+..+.+|...+.++.|+|++. .+++++.|+.+++||......... ...... ... ...|+|
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~--~~~~~~-~~~-~~~~~~ 251 (466)
T COG2319 176 LDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRS--TLSGHS-DSV-VSSFSP 251 (466)
T ss_pred CCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEee--ecCCCC-cce-eEeECC
Confidence 499999999998888888888999999999999987 666668999999998775443331 011000 111 116888
Q ss_pred CCCEEEEeccccCCccccCceEEEeecC
Q psy8803 84 SDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.+..++ ++ +.++.+++|+++
T Consensus 252 ~~~~~~-~~-------~~d~~~~~~~~~ 271 (466)
T COG2319 252 DGSLLA-SG-------SSDGTIRLWDLR 271 (466)
T ss_pred CCCEEE-Ee-------cCCCcEEEeeec
Confidence 875544 55 789999999874
No 194
>KOG3914|consensus
Probab=98.75 E-value=6e-08 Score=61.49 Aligned_cols=89 Identities=18% Similarity=0.140 Sum_probs=61.6
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCC-----ceeeeecceeeeecCceeeE
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYP-----SKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~-----~~~~~~~~~~~~~~~~~~~v 79 (111)
....+.+|.+..+.+. .+-||-+-+..+.|+||++.|+++..|..|++-..... .+.+|..-|..+..
T Consensus 130 D~~~~di~s~~~~~~~-~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl------ 202 (390)
T KOG3914|consen 130 DVYSFDILSADSGRCE-PILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISL------ 202 (390)
T ss_pred CceeeeeecccccCcc-hhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeee------
Confidence 3344555555544333 33479999999999999999999999999998877653 23345444444432
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.+++.+.++ ++|+++++||++
T Consensus 203 ----~~~~~LlS~-------sGD~tlr~Wd~~ 223 (390)
T KOG3914|consen 203 ----TDNYLLLSG-------SGDKTLRLWDIT 223 (390)
T ss_pred ----ccCceeeec-------CCCCcEEEEecc
Confidence 233445666 889999999974
No 195
>KOG0974|consensus
Probab=98.75 E-value=1.1e-07 Score=66.21 Aligned_cols=90 Identities=16% Similarity=0.120 Sum_probs=68.5
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee-----eecceeeeecCcee
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK-----YSHDMKTFSWKYTQ 77 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~-----~~~~~~~~~~~~~~ 77 (111)
++--+.+-+|+....+.-..+.+|.+.+..+.|+.||+++++.++|+++++|++.+.+... |...+..
T Consensus 151 gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~------- 223 (967)
T KOG0974|consen 151 GSVFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWA------- 223 (967)
T ss_pred ccccccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEE-------
Confidence 4455678889887544444789999999999999999999999999999999998755433 5444443
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+.|.|. . +.++ +.|-+.++|+.
T Consensus 224 -~~~~~n--~-i~t~-------gedctcrvW~~ 245 (967)
T KOG0974|consen 224 -CCFLPN--R-IITV-------GEDCTCRVWGV 245 (967)
T ss_pred -EEeccc--e-eEEe-------ccceEEEEEec
Confidence 445555 4 4555 78999999953
No 196
>KOG1063|consensus
Probab=98.74 E-value=6.4e-08 Score=65.18 Aligned_cols=98 Identities=18% Similarity=0.247 Sum_probs=69.1
Q ss_pred ccccCeeeecCCCCce----eeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCC--ceeeeecceeeeec-Cc
Q psy8803 3 SWYEEYKRLDYHTPIV----ETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYP--SKVKYSHDMKTFSW-KY 75 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~----~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~--~~~~~~~~~~~~~~-~~ 75 (111)
-+-|.++.+|....+. .....+.|+..|..+.|+|++.+|+|++.|+++++|..... ..+.+ +.++.+ .+
T Consensus 590 vsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~---~a~~~~~~a 666 (764)
T KOG1063|consen 590 VSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISR---FACLKFSLA 666 (764)
T ss_pred eecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhh---hchhccCCc
Confidence 4668899999885431 23346789999999999999999999999999999998765 32222 111111 23
Q ss_pred eeeEEEcc----CCCEEEEeccccCCccccCceEEEeec
Q psy8803 76 TQYSQFNE----SDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 76 ~~~v~~~~----~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
++.+++.| +...+++.| -..|+|.+|..
T Consensus 667 VTAv~~~~~~~~e~~~~vavG-------le~GeI~l~~~ 698 (764)
T KOG1063|consen 667 VTAVAYLPVDHNEKGDVVAVG-------LEKGEIVLWRR 698 (764)
T ss_pred eeeEEeeccccccccceEEEE-------ecccEEEEEec
Confidence 44555554 334467777 78899999973
No 197
>KOG0974|consensus
Probab=98.73 E-value=3.6e-08 Score=68.52 Aligned_cols=95 Identities=16% Similarity=0.088 Sum_probs=68.3
Q ss_pred cccccCeeeecCCCCceeee-eeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETE-VLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~-~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
+-+.|.++|+|++.+.+... ..-+|+..+..+.|.|. .++++++|.++++|+....+...+..... ..+..++
T Consensus 192 s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~~~~l~~y~~h~g----~~iw~~~ 265 (967)
T KOG0974|consen 192 SVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVNGTQLEVYDEHSG----KGIWKIA 265 (967)
T ss_pred EEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEecccceehhhhhhhh----cceeEEE
Confidence 45789999999999887655 66789999999999988 99999999999999776543222111111 1111233
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.. .+..+++++ +.|+.+++|++
T Consensus 266 ~~-~~~~~~vT~-------g~Ds~lk~~~l 287 (967)
T KOG0974|consen 266 VP-IGVIIKVTG-------GNDSTLKLWDL 287 (967)
T ss_pred Ec-CCceEEEee-------ccCcchhhhhh
Confidence 33 555667777 78899999986
No 198
>KOG2106|consensus
Probab=98.70 E-value=6.5e-07 Score=58.83 Aligned_cols=92 Identities=14% Similarity=0.098 Sum_probs=70.5
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee-eecceeeeecCceeeE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK-YSHDMKTFSWKYTQYS 79 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~-~~~~~~~~~~~~~~~v 79 (111)
+|++-|+++++|+ ..+++-.. .-..++.|+.|+|.| .++.|...|...+.|.++...+. |.. ..+++.+
T Consensus 384 ~T~gqdk~v~lW~--~~k~~wt~-~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d------~~~ls~v 453 (626)
T KOG2106|consen 384 LTCGQDKHVRLWN--DHKLEWTK-IIEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTD------NEQLSVV 453 (626)
T ss_pred eeccCcceEEEcc--CCceeEEE-EecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEec------CCceEEE
Confidence 4678899999999 34443332 246788999999999 99999999999999998855443 211 2677889
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+|+|++..+++ | +.|+.|.||.+
T Consensus 454 ~ysp~G~~lAv-g-------s~d~~iyiy~V 476 (626)
T KOG2106|consen 454 RYSPDGAFLAV-G-------SHDNHIYIYRV 476 (626)
T ss_pred EEcCCCCEEEE-e-------cCCCeEEEEEE
Confidence 99999988755 4 88999999865
No 199
>KOG1524|consensus
Probab=98.67 E-value=4.4e-07 Score=60.14 Aligned_cols=55 Identities=15% Similarity=0.206 Sum_probs=42.1
Q ss_pred eeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee---eecceeeeecC
Q psy8803 20 TEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK---YSHDMKTFSWK 74 (111)
Q Consensus 20 ~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~---~~~~~~~~~~~ 74 (111)
+..+++|++.|.++.|++..++|++|++|.+.++||......+. |..++..++|.
T Consensus 179 ~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~Lf~S~~~ey~ITSva~n 236 (737)
T KOG1524|consen 179 IIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANLFTSAAEEYAITSVAFN 236 (737)
T ss_pred eeEEeccCcEEEEeecCccccceeecCCceeEEeecccCcccccCChhccceeeeeec
Confidence 45567899999999999999999999999999999987643332 33344444443
No 200
>KOG1517|consensus
Probab=98.67 E-value=2.6e-07 Score=65.19 Aligned_cols=102 Identities=16% Similarity=0.051 Sum_probs=68.9
Q ss_pred ccccCeeeecCCCCceeeeeee-cccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCceee-eecceeeeecCceeeE
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLT-QHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKVK-YSHDMKTFSWKYTQYS 79 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~~-~~~~~~~~~~~~~~~v 79 (111)
++.-..|+|||....+.+..+. +....++.+.-+.. |+.|+.|..||.+++||.+....-. ....-...++.++..+
T Consensus 1183 tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~ 1262 (1387)
T KOG1517|consen 1183 TGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHL 1262 (1387)
T ss_pred cCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeE
Confidence 3445689999999777766664 44556666665443 7999999999999999998642211 0000011112335567
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.+.+.+..-+++| +.+|.|.+||+|
T Consensus 1263 slq~~G~~elvSg-------s~~G~I~~~DlR 1287 (1387)
T KOG1517|consen 1263 SLQRQGLGELVSG-------SQDGDIQLLDLR 1287 (1387)
T ss_pred EeecCCCcceeee-------ccCCeEEEEecc
Confidence 7777665556788 899999999987
No 201
>KOG3881|consensus
Probab=98.63 E-value=4.3e-07 Score=57.73 Aligned_cols=98 Identities=7% Similarity=0.030 Sum_probs=74.8
Q ss_pred cccccCeeeecCCCCc-eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeee-ecceeeeecCceeeE
Q psy8803 2 KSWYEEYKRLDYHTPI-VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKY-SHDMKTFSWKYTQYS 79 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~-~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~-~~~~~~~~~~~~~~v 79 (111)
+..--+++++||...+ +++..|.-.+..++++...|+++.+.++..-+.+..||++......+ ...+. ..+..+
T Consensus 221 t~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~t----Gsirsi 296 (412)
T KOG3881|consen 221 TITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGIT----GSIRSI 296 (412)
T ss_pred EEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCcc----CCcceE
Confidence 3345678999999865 67878877788999999999999999999999999999998876653 11111 234455
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
-.+|....+ +++ +-|+.+||+|++
T Consensus 297 h~hp~~~~l-as~-------GLDRyvRIhD~k 320 (412)
T KOG3881|consen 297 HCHPTHPVL-ASC-------GLDRYVRIHDIK 320 (412)
T ss_pred EEcCCCceE-Eee-------ccceeEEEeecc
Confidence 566676665 455 689999999974
No 202
>KOG1963|consensus
Probab=98.61 E-value=5.7e-07 Score=61.81 Aligned_cols=96 Identities=14% Similarity=0.143 Sum_probs=73.7
Q ss_pred CcccccCeeeecCCCC--c--eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCce
Q psy8803 1 KKSWYEEYKRLDYHTP--I--VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYT 76 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~--~--~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 76 (111)
|++-.||.|.+|.-.. + .....|.-|...|.+++|+++|.+|.+||..+.+-+|.+.++.... .+.+. +++
T Consensus 221 Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqf----LPRLg-s~I 295 (792)
T KOG1963|consen 221 AAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKKQF----LPRLG-SPI 295 (792)
T ss_pred EEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCCccc----ccccC-Cee
Confidence 4567899999998754 2 3455666789999999999999999999999999999999876322 22222 677
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEee
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
..+.++|++....++. .|+.|++-.
T Consensus 296 ~~i~vS~ds~~~sl~~--------~DNqI~li~ 320 (792)
T KOG1963|consen 296 LHIVVSPDSDLYSLVL--------EDNQIHLIK 320 (792)
T ss_pred EEEEEcCCCCeEEEEe--------cCceEEEEe
Confidence 7888999888776654 488887754
No 203
>KOG1587|consensus
Probab=98.61 E-value=2e-07 Score=62.65 Aligned_cols=97 Identities=19% Similarity=0.180 Sum_probs=69.4
Q ss_pred ccccCeeeecCCC-CceeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCceee-eecceeeeecCceeeE
Q psy8803 3 SWYEEYKRLDYHT-PIVETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKVK-YSHDMKTFSWKYTQYS 79 (111)
Q Consensus 3 ~~~d~~i~iw~~~-~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~~-~~~~~~~~~~~~~~~v 79 (111)
+..|-+++||.-. ...++..+..+...|.+++|||- -..|+++..+|.+.+||+....... ....+- -...+.+
T Consensus 416 s~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~---~~~l~~~ 492 (555)
T KOG1587|consen 416 SVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVC---SPALTRV 492 (555)
T ss_pred eeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCccccccc---cccccee
Confidence 4459999999998 67788888888888999999996 4688889999999999997533221 111111 1233344
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.+++.+.. +++| ...|.++++++
T Consensus 493 ~~s~~g~~-lavG-------d~~G~~~~~~l 515 (555)
T KOG1587|consen 493 RWSPNGKL-LAVG-------DANGTTHILKL 515 (555)
T ss_pred ecCCCCcE-EEEe-------cCCCcEEEEEc
Confidence 55555655 5666 77888999987
No 204
>KOG2139|consensus
Probab=98.60 E-value=1.1e-06 Score=55.68 Aligned_cols=86 Identities=9% Similarity=0.049 Sum_probs=61.1
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEc
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFN 82 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 82 (111)
|-.|.+|.|||..++..+.-...--+.+.-+.||||+.+|+++..|+..++|+......... .+. .-..+++-.|+
T Consensus 214 S~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~er--w~l--gsgrvqtacWs 289 (445)
T KOG2139|consen 214 SFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKER--WIL--GSGRVQTACWS 289 (445)
T ss_pred ccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhcccceecc--eec--cCCceeeeeec
Confidence 45678899999998865544333456788899999999999999999999996654322211 111 11356777888
Q ss_pred cCCCEEEEec
Q psy8803 83 ESDTLLLVSG 92 (111)
Q Consensus 83 ~~~~~~~~~~ 92 (111)
|.+..++.+.
T Consensus 290 pcGsfLLf~~ 299 (445)
T KOG2139|consen 290 PCGSFLLFAC 299 (445)
T ss_pred CCCCEEEEEE
Confidence 8888776654
No 205
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.59 E-value=4.7e-07 Score=38.29 Aligned_cols=39 Identities=38% Similarity=0.606 Sum_probs=34.2
Q ss_pred ceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEe
Q psy8803 17 IVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWT 55 (111)
Q Consensus 17 ~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~ 55 (111)
+++...+..|...|.++.|.+++..+++++.|+.+++|+
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 345667778999999999999999999999999999996
No 206
>KOG2106|consensus
Probab=98.58 E-value=3e-06 Score=55.83 Aligned_cols=93 Identities=18% Similarity=0.119 Sum_probs=65.9
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC-CceeeeecceeeeecCceeeEEEcc
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY-PSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
-.|.--+.|.++... ..+...+..+.++.|+|+|.+||.|+.|..|++|.+.. +..... +.....+|++.+.|++
T Consensus 426 ~~G~w~V~d~e~~~l-v~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r---~~k~~gs~ithLDwS~ 501 (626)
T KOG2106|consen 426 ATGRWFVLDTETQDL-VTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSR---VGKCSGSPITHLDWSS 501 (626)
T ss_pred ccceEEEEeccccee-EEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEE---eeeecCceeEEeeecC
Confidence 345555666665333 33333478999999999999999999999999999865 333332 2222227888889998
Q ss_pred CCCEEEEeccccCCccccCceEEEee
Q psy8803 84 SDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
+..++ .+. +.|-.|.+|.
T Consensus 502 Ds~~~-~~~-------S~d~eiLyW~ 519 (626)
T KOG2106|consen 502 DSQFL-VSN-------SGDYEILYWK 519 (626)
T ss_pred CCceE-Eec-------cCceEEEEEc
Confidence 88776 444 7788899984
No 207
>KOG1523|consensus
Probab=98.57 E-value=1.1e-06 Score=54.88 Aligned_cols=99 Identities=17% Similarity=0.193 Sum_probs=67.3
Q ss_pred ccccCeeeecCCCCc---eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 3 SWYEEYKRLDYHTPI---VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~---~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
+-...-|.||..... +..+.++.|+..|.+++|+|..+-|++++.|+.-++|....+..-...-.+..+. ...++|
T Consensus 28 ~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiN-rAAt~V 106 (361)
T KOG1523|consen 28 SPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRIN-RAATCV 106 (361)
T ss_pred ccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEec-cceeeE
Confidence 334445666665533 5778888999999999999999999999999999999984321111000111111 234567
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.|+|.++.+ +.| +..+.|.||-+
T Consensus 107 ~WsP~enkF-AVg-------Sgar~isVcy~ 129 (361)
T KOG1523|consen 107 KWSPKENKF-AVG-------SGARLISVCYY 129 (361)
T ss_pred eecCcCceE-Eec-------cCccEEEEEEE
Confidence 778888776 445 77888888854
No 208
>KOG4547|consensus
Probab=98.57 E-value=1.2e-06 Score=58.01 Aligned_cols=96 Identities=15% Similarity=0.052 Sum_probs=72.1
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
+..-|..+..|+...+..+..+...+..+..++.+||+..+++++ +.|++||+++.+.+.+. ..+ -+++++++|
T Consensus 119 S~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~f---tgh-~s~v~t~~f 192 (541)
T KOG4547|consen 119 SVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITF---TGH-GSPVRTLSF 192 (541)
T ss_pred ecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEe---cCC-CcceEEEEE
Confidence 345688999999999999999998999999999999999999998 68999999998776521 111 134445555
Q ss_pred ccC-----CCEEEEeccccCCccccCceEEEeec
Q psy8803 82 NES-----DTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 82 ~~~-----~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
--. +.+++.+. ..++-|.+|-+
T Consensus 193 ~~~~~g~~G~~vLssa-------~~~r~i~~w~v 219 (541)
T KOG4547|consen 193 TTLIDGIIGKYVLSSA-------AAERGITVWVV 219 (541)
T ss_pred EEeccccccceeeecc-------ccccceeEEEE
Confidence 544 56776666 55666777754
No 209
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.57 E-value=2.1e-06 Score=54.45 Aligned_cols=98 Identities=10% Similarity=-0.042 Sum_probs=65.6
Q ss_pred cccccCeeeecCCCC-ce--eeeeeecccccEEEEEEcCCCcEEEEE-eCCCeEEEEecCC-CceeeeecceeeeecCce
Q psy8803 2 KSWYEEYKRLDYHTP-IV--ETEVLTQHTHQVLHVSFSHNGRYFATC-SKDGYILVWTSSY-PSKVKYSHDMKTFSWKYT 76 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~-~~--~~~~~~~~~~~v~~i~~s~~~~~l~s~-~~d~~i~iw~~~~-~~~~~~~~~~~~~~~~~~ 76 (111)
+...|++|.+|++.+ ++ .+..+. +.+....+.++|+++.|..+ ..++.+.+|++.. +.... ...+.. ....
T Consensus 7 ~~~~~~~I~~~~~~~~g~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~-~~~~~~--~~~p 82 (330)
T PRK11028 7 ASPESQQIHVWNLNHEGALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTF-AAESPL--PGSP 82 (330)
T ss_pred EcCCCCCEEEEEECCCCceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEE-eeeecC--CCCc
Confidence 346789999999964 32 344443 34567788999999987665 4578899999863 22211 111111 1234
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
..++|+|++..++++. -.++.|.+|++
T Consensus 83 ~~i~~~~~g~~l~v~~-------~~~~~v~v~~~ 109 (330)
T PRK11028 83 THISTDHQGRFLFSAS-------YNANCVSVSPL 109 (330)
T ss_pred eEEEECCCCCEEEEEE-------cCCCeEEEEEE
Confidence 5789999999888876 45778899876
No 210
>KOG4227|consensus
Probab=98.56 E-value=8.6e-07 Score=56.91 Aligned_cols=101 Identities=11% Similarity=0.035 Sum_probs=74.8
Q ss_pred cccccCeeeecCCCCceeeeeeec--ccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCc-eeeeecceeeeecCceee
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQ--HTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPS-KVKYSHDMKTFSWKYTQY 78 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~--~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~~~ 78 (111)
++..+++|-+.|+.+.+.+..+.. ..+.|+.+..+|..+.|++.+.++.+.+||.+... .... -...-..+...+
T Consensus 122 SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~--~~~AN~~~~F~t 199 (609)
T KOG4227|consen 122 SGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISL--VLPANSGKNFYT 199 (609)
T ss_pred cCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCce--eeecCCCcccee
Confidence 456789999999998888776641 23589999999999999999999999999998643 1110 011111234567
Q ss_pred EEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 79 SQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+.|+|....++.+. +..+-+.+||.|
T Consensus 200 ~~F~P~~P~Li~~~-------~~~~G~~~~D~R 225 (609)
T KOG4227|consen 200 AEFHPETPALILVN-------SETGGPNVFDRR 225 (609)
T ss_pred eeecCCCceeEEec-------cccCCCCceeec
Confidence 89999888888877 566668899865
No 211
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.54 E-value=2.4e-06 Score=56.90 Aligned_cols=72 Identities=17% Similarity=0.280 Sum_probs=56.2
Q ss_pred cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCce
Q psy8803 25 QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGE 104 (111)
Q Consensus 25 ~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (111)
...+.+.+++++|+...++.|+.||.+.+||.......... .. ..++.++|+|++..+++ | +..|+
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~k-----a~-~~P~~iaWHp~gai~~V-~-------s~qGe 322 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLAK-----AE-FIPTLIAWHPDGAIFVV-G-------SEQGE 322 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeeee-----ec-ccceEEEEcCCCcEEEE-E-------cCCce
Confidence 36789999999999999999999999999999765433211 11 23557889999887765 3 67899
Q ss_pred EEEeec
Q psy8803 105 IAVFSL 110 (111)
Q Consensus 105 i~iw~~ 110 (111)
+.+||+
T Consensus 323 lQ~FD~ 328 (545)
T PF11768_consen 323 LQCFDM 328 (545)
T ss_pred EEEEEe
Confidence 999996
No 212
>KOG1587|consensus
Probab=98.52 E-value=2.3e-06 Score=57.70 Aligned_cols=98 Identities=12% Similarity=0.082 Sum_probs=62.7
Q ss_pred ccCeeeecCCCCc-eeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCcee--eeecceeeeecCceeeEE
Q psy8803 5 YEEYKRLDYHTPI-VETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKV--KYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 5 ~d~~i~iw~~~~~-~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~--~~~~~~~~~~~~~~~~v~ 80 (111)
.++.+.+|++... .+...+. ....|.+++|+|. .++++.|..+|.+.+||++..... ...+......-.++..+.
T Consensus 220 ~~~~~~vW~~~~p~~Pe~~~~-~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vv 298 (555)
T KOG1587|consen 220 PDGVLLVWSLKNPNTPELVLE-SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVV 298 (555)
T ss_pred CCceEEEEecCCCCCceEEEe-cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEE
Confidence 3457899999855 5555555 5789999999994 788999999999999999875431 100000000012333343
Q ss_pred EccCC--CEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESD--TLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~--~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|.... ..++. + +.||.|..|+++
T Consensus 299 W~~~~~~~~f~s-~-------ssDG~i~~W~~~ 323 (555)
T KOG1587|consen 299 WLQNEHNTEFFS-L-------SSDGSICSWDTD 323 (555)
T ss_pred EeccCCCCceEE-E-------ecCCcEeeeecc
Confidence 43322 23444 3 669999999874
No 213
>KOG1240|consensus
Probab=98.51 E-value=4.9e-06 Score=59.74 Aligned_cols=58 Identities=17% Similarity=0.143 Sum_probs=45.7
Q ss_pred CcccccCeeeecCCCCc-------eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 1 KKSWYEEYKRLDYHTPI-------VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~-------~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
++++.||+|++|+.+.- +...++..-.+.+.++.+.+.++.+|.++.||.+.+.++.-
T Consensus 1065 vsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~ 1129 (1431)
T KOG1240|consen 1065 VSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDH 1129 (1431)
T ss_pred EEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEccc
Confidence 47899999999999742 12222233467899999999999999999999999998764
No 214
>KOG1009|consensus
Probab=98.47 E-value=4.4e-07 Score=57.96 Aligned_cols=85 Identities=13% Similarity=0.123 Sum_probs=61.3
Q ss_pred CcccccCeeeecCCC--------C-----c---eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeee
Q psy8803 1 KKSWYEEYKRLDYHT--------P-----I---VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKY 64 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~--------~-----~---~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~ 64 (111)
|++..+|.+.+|-.. + . .....+.+|...++.++|+||++.+++++.|..+++||+..+.....
T Consensus 81 ASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~ 160 (434)
T KOG1009|consen 81 ASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAI 160 (434)
T ss_pred eecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEee
Confidence 567788899999776 2 1 23445568999999999999999999999999999999998776541
Q ss_pred ecceeeeecCceeeEEEccCCCEEE
Q psy8803 65 SHDMKTFSWKYTQYSQFNESDTLLL 89 (111)
Q Consensus 65 ~~~~~~~~~~~~~~v~~~~~~~~~~ 89 (111)
..-.-..+|.+++.|...+++
T Consensus 161 ----~~dh~~yvqgvawDpl~qyv~ 181 (434)
T KOG1009|consen 161 ----LDDHEHYVQGVAWDPLNQYVA 181 (434)
T ss_pred ----ccccccccceeecchhhhhhh
Confidence 111113455566666555543
No 215
>KOG4227|consensus
Probab=98.47 E-value=3.2e-06 Score=54.38 Aligned_cols=98 Identities=9% Similarity=0.113 Sum_probs=72.4
Q ss_pred CcccccCeeeecCCCCc------eeeeeee-cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee---eecceee
Q psy8803 1 KKSWYEEYKRLDYHTPI------VETEVLT-QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK---YSHDMKT 70 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~------~~~~~~~-~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~---~~~~~~~ 70 (111)
|++..|-++++|..... +++.... .|.+.|.|+.|....+.+.+|+.++++..-|+++.+.+. +...-
T Consensus 72 ~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~-- 149 (609)
T KOG4227|consen 72 ASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANENNNR-- 149 (609)
T ss_pred eecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeecccceeeeeecccCcc--
Confidence 46788999999998642 3444333 466899999999989999999999999999999876554 21100
Q ss_pred eecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 71 FSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 71 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
..+..+..+|.++.++++ +.++.|.|||.|
T Consensus 150 ---~~VY~m~~~P~DN~~~~~--------t~~~~V~~~D~R 179 (609)
T KOG4227|consen 150 ---GDVYHMDQHPTDNTLIVV--------TRAKLVSFIDNR 179 (609)
T ss_pred ---cceeecccCCCCceEEEE--------ecCceEEEEecc
Confidence 234456667877776654 578889999975
No 216
>KOG1064|consensus
Probab=98.46 E-value=2.7e-07 Score=68.06 Aligned_cols=85 Identities=13% Similarity=0.113 Sum_probs=65.1
Q ss_pred ccccCeeeecCCCC--ceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 3 SWYEEYKRLDYHTP--IVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 3 ~~~d~~i~iw~~~~--~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
|..++-+.+||..- ...+.. +.|.+.+.++++.|..++|++||.+|.+++||++..+..++-+. +
T Consensus 2311 s~d~~n~~lwDtl~~~~~s~v~-~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~-----~------- 2377 (2439)
T KOG1064|consen 2311 SSDNRNVCLWDTLLPPMNSLVH-TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA-----L------- 2377 (2439)
T ss_pred CCCCCcccchhcccCcccceee-eecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh-----h-------
Confidence 45677899999852 222222 78999999999999999999999999999999998665553222 1
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+....+++| +..|.|+||++
T Consensus 2378 ---~~~~~f~~~-------ss~g~ikIw~~ 2397 (2439)
T KOG1064|consen 2378 ---DTREYFVTG-------SSEGNIKIWRL 2397 (2439)
T ss_pred ---hhhheeecc-------CcccceEEEEc
Confidence 233456777 88899999986
No 217
>KOG0644|consensus
Probab=98.45 E-value=6.3e-08 Score=66.71 Aligned_cols=77 Identities=23% Similarity=0.389 Sum_probs=61.1
Q ss_pred eeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCcee----eeecceeeeecCceeeEEEccCCCEEEEeccc
Q psy8803 19 ETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKV----KYSHDMKTFSWKYTQYSQFNESDTLLLVSGVH 94 (111)
Q Consensus 19 ~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 94 (111)
.+..+.+|...|+|..|+..|+++++++.|..++||.+++..+. +|...+..++.+ ..+.+++++
T Consensus 182 ~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs---------~~n~~iaaa-- 250 (1113)
T KOG0644|consen 182 NIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVS---------SNNTMIAAA-- 250 (1113)
T ss_pred HHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccc---------hhhhhhhhc--
Confidence 34556689999999999999999999999999999999886544 366677666543 455666666
Q ss_pred cCCccccCceEEEeecC
Q psy8803 95 FGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 95 ~~~~~~~~~~i~iw~~~ 111 (111)
+.|..|++|.++
T Consensus 251 -----S~D~vIrvWrl~ 262 (1113)
T KOG0644|consen 251 -----SNDKVIRVWRLP 262 (1113)
T ss_pred -----ccCceEEEEecC
Confidence 889999999874
No 218
>KOG1517|consensus
Probab=98.45 E-value=2.3e-06 Score=60.69 Aligned_cols=102 Identities=19% Similarity=0.246 Sum_probs=69.0
Q ss_pred CcccccCeeeecCCCCc---eeeeeeeccccc--EEEEEEcCCCc-EEEEEeCCCeEEEEecCCCceeeeecceeeeecC
Q psy8803 1 KKSWYEEYKRLDYHTPI---VETEVLTQHTHQ--VLHVSFSHNGR-YFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWK 74 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~---~~~~~~~~~~~~--v~~i~~s~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 74 (111)
+.+.-||.+++||.+.- ..+...+.|+.. |..+.+.+.|- .|++|+.+|.|++||++.........-+..-..+
T Consensus 1225 ~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yG 1304 (1387)
T KOG1517|consen 1225 AAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYG 1304 (1387)
T ss_pred EEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccC
Confidence 35678999999999743 467777889888 99999988654 5999999999999999974222111111100001
Q ss_pred -ceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 75 -YTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 75 -~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
..+++.-++.... +++| +. +.|+||++.
T Consensus 1305 s~lTal~VH~hapi-iAsG-------s~-q~ikIy~~~ 1333 (1387)
T KOG1517|consen 1305 SALTALTVHEHAPI-IASG-------SA-QLIKIYSLS 1333 (1387)
T ss_pred ccceeeeeccCCCe-eeec-------Cc-ceEEEEecC
Confidence 2345555655544 5666 54 889999863
No 219
>KOG2110|consensus
Probab=98.45 E-value=5.5e-06 Score=52.55 Aligned_cols=93 Identities=15% Similarity=0.155 Sum_probs=65.5
Q ss_pred CeeeecCCCCceeeeeeec---ccccEEEEEEcCCCcEEEEEe--CCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 7 EYKRLDYHTPIVETEVLTQ---HTHQVLHVSFSHNGRYFATCS--KDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~---~~~~v~~i~~s~~~~~l~s~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
+.|.|||++.-++++++.. +...+.++++++.+.+++-.+ ..|.+.+||..+.+... .+.++. +++.+++|
T Consensus 106 e~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~---~I~aH~-~~lAalaf 181 (391)
T KOG2110|consen 106 ESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVN---TINAHK-GPLAALAF 181 (391)
T ss_pred ccEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeee---EEEecC-CceeEEEE
Confidence 4589999998888888763 344566666666677877654 36789999998765544 244443 56778899
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
++++..++++. .....|||+.+
T Consensus 182 s~~G~llATAS-------eKGTVIRVf~v 203 (391)
T KOG2110|consen 182 SPDGTLLATAS-------EKGTVIRVFSV 203 (391)
T ss_pred CCCCCEEEEec-------cCceEEEEEEc
Confidence 99998876544 45556788764
No 220
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.43 E-value=9.9e-06 Score=53.40 Aligned_cols=80 Identities=15% Similarity=0.072 Sum_probs=55.9
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeC---CCeEEEEecCCCceeeeecceeeeecCceeeEEEcc
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSK---DGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
..|.++|.. +.....+..+...+....|+|||+.|+..+. +..|.+||+.++..... .... ......+|+|
T Consensus 182 ~~l~~~d~d-g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l----~~~~-g~~~~~~~SP 255 (435)
T PRK05137 182 KRLAIMDQD-GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELV----GNFP-GMTFAPRFSP 255 (435)
T ss_pred eEEEEECCC-CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEe----ecCC-CcccCcEECC
Confidence 367888875 5445567778889999999999998877653 46899999987654331 1110 1233567899
Q ss_pred CCCEEEEec
Q psy8803 84 SDTLLLVSG 92 (111)
Q Consensus 84 ~~~~~~~~~ 92 (111)
++..++.+.
T Consensus 256 DG~~la~~~ 264 (435)
T PRK05137 256 DGRKVVMSL 264 (435)
T ss_pred CCCEEEEEE
Confidence 999887665
No 221
>KOG0771|consensus
Probab=98.42 E-value=1.3e-06 Score=55.90 Aligned_cols=64 Identities=23% Similarity=0.358 Sum_probs=48.6
Q ss_pred EEEEEcCCCcEEEEEeCCCeEEEEecCCCcee----eeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEE
Q psy8803 31 LHVSFSHNGRYFATCSKDGYILVWTSSYPSKV----KYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIA 106 (111)
Q Consensus 31 ~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~ 106 (111)
..++|+++|..+++++.||++++|+....... .|..+|. .+.|+|++..++..+ .+ ..+
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~--------DL~FS~dgk~lasig--------~d-~~~ 210 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVK--------DLDFSPDGKFLASIG--------AD-SAR 210 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccc--------cceeCCCCcEEEEec--------CC-ceE
Confidence 78899999999999999999999996653322 2444554 455788888877765 34 799
Q ss_pred EeecC
Q psy8803 107 VFSLQ 111 (111)
Q Consensus 107 iw~~~ 111 (111)
||+++
T Consensus 211 VW~~~ 215 (398)
T KOG0771|consen 211 VWSVN 215 (398)
T ss_pred EEEec
Confidence 99864
No 222
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.42 E-value=6.2e-06 Score=52.31 Aligned_cols=99 Identities=9% Similarity=0.074 Sum_probs=62.7
Q ss_pred cccCeeeecCCCC-c---eeeeeeecccccEEEEEEcCCCcEEEEE-eCCCeEEEEecCCCceee-ee-cceeeeecCce
Q psy8803 4 WYEEYKRLDYHTP-I---VETEVLTQHTHQVLHVSFSHNGRYFATC-SKDGYILVWTSSYPSKVK-YS-HDMKTFSWKYT 76 (111)
Q Consensus 4 ~~d~~i~iw~~~~-~---~~~~~~~~~~~~v~~i~~s~~~~~l~s~-~~d~~i~iw~~~~~~~~~-~~-~~~~~~~~~~~ 76 (111)
..++.+.+|++.+ + +.+..+. +......+.++|+++.++.+ ..++.|.+||+.....+. .. ..+........
T Consensus 99 ~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p 177 (330)
T PRK11028 99 YNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGP 177 (330)
T ss_pred cCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCC
Confidence 4578899998863 2 2222222 22345678899998877554 456899999997632221 10 01111111345
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
..++|+|++.+++++. ..++.|.+|++
T Consensus 178 ~~~~~~pdg~~lyv~~-------~~~~~v~v~~~ 204 (330)
T PRK11028 178 RHMVFHPNQQYAYCVN-------ELNSSVDVWQL 204 (330)
T ss_pred ceEEECCCCCEEEEEe-------cCCCEEEEEEE
Confidence 6789999999988865 55888999986
No 223
>KOG4497|consensus
Probab=98.39 E-value=4.8e-06 Score=52.48 Aligned_cols=84 Identities=13% Similarity=0.067 Sum_probs=60.5
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEe-CCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCS-KDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
...|+.|++|++.+-+-..++..-...+..++|||||+.|+.-+ -+-+|.+|.+.+....... ... ..++.++|
T Consensus 67 ~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~-~pK----~~~kg~~f 141 (447)
T KOG4497|consen 67 AYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLP-HPK----TNVKGYAF 141 (447)
T ss_pred eeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEec-ccc----cCceeEEE
Confidence 34688999999998777667766677889999999997666554 5778999999876544311 111 22357889
Q ss_pred ccCCCEEEEe
Q psy8803 82 NESDTLLLVS 91 (111)
Q Consensus 82 ~~~~~~~~~~ 91 (111)
+|++...+.+
T Consensus 142 ~~dg~f~ai~ 151 (447)
T KOG4497|consen 142 HPDGQFCAIL 151 (447)
T ss_pred CCCCceeeee
Confidence 9998876554
No 224
>KOG2139|consensus
Probab=98.38 E-value=7.2e-06 Score=52.18 Aligned_cols=101 Identities=14% Similarity=0.159 Sum_probs=68.7
Q ss_pred CcccccCeeeecCCCCceeeeeee-cccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCC----ce--ee--eecceee
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLT-QHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYP----SK--VK--YSHDMKT 70 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~----~~--~~--~~~~~~~ 70 (111)
|+...|..|++||-....+ ..++ ..+..|.|++|-|. +..|+.++. .-|.+|..... .. +. +...+..
T Consensus 114 ava~nddvVriy~ksst~p-t~Lks~sQrnvtclawRPlsaselavgCr-~gIciW~~s~tln~~r~~~~~s~~~~qvl~ 191 (445)
T KOG2139|consen 114 AVATNDDVVRIYDKSSTCP-TKLKSVSQRNVTCLAWRPLSASELAVGCR-AGICIWSDSRTLNANRNIRMMSTHHLQVLQ 191 (445)
T ss_pred hhhccCcEEEEeccCCCCC-ceecchhhcceeEEEeccCCcceeeeeec-ceeEEEEcCcccccccccccccccchhhee
Confidence 4567899999999887433 3333 45789999999996 456777775 46789987532 11 11 1111211
Q ss_pred -eecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 71 -FSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 71 -~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
-...+++.+++++++..++.+. -.+..|.|||.
T Consensus 192 ~pgh~pVtsmqwn~dgt~l~tAS-------~gsssi~iWdp 225 (445)
T KOG2139|consen 192 DPGHNPVTSMQWNEDGTILVTAS-------FGSSSIMIWDP 225 (445)
T ss_pred CCCCceeeEEEEcCCCCEEeecc-------cCcceEEEEcC
Confidence 1114788899999998887766 77888999986
No 225
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.35 E-value=9.3e-06 Score=53.51 Aligned_cols=93 Identities=14% Similarity=0.123 Sum_probs=61.2
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeC---CCeEEEEecCCCceeeeecceeeeecCceeeEEEcc
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSK---DGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
..|.+||.. +.....+..+...+....|+||++.|+..+. ...+.+||+..+...... ... ......+|+|
T Consensus 184 ~~l~i~D~~-g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~-~~~----g~~~~~~~Sp 257 (433)
T PRK04922 184 YALQVADSD-GYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVA-SFR----GINGAPSFSP 257 (433)
T ss_pred EEEEEECCC-CCCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEec-cCC----CCccCceECC
Confidence 468899986 4444556667778999999999998887763 346999999876543311 111 1122568999
Q ss_pred CCCEEEEeccccCCccccCceEEEeec
Q psy8803 84 SDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
++..++.+... .....|.+||+
T Consensus 258 DG~~l~~~~s~-----~g~~~Iy~~d~ 279 (433)
T PRK04922 258 DGRRLALTLSR-----DGNPEIYVMDL 279 (433)
T ss_pred CCCEEEEEEeC-----CCCceEEEEEC
Confidence 99988765411 11235888876
No 226
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.33 E-value=1.4e-05 Score=52.69 Aligned_cols=89 Identities=15% Similarity=0.163 Sum_probs=55.6
Q ss_pred CeeeecCCCCcee--eeeeecccccEEEEEEcCCCcEEEEEe-CCCeEEEE--ecCCCceeeeecceeeeecCceeeEEE
Q psy8803 7 EYKRLDYHTPIVE--TEVLTQHTHQVLHVSFSHNGRYFATCS-KDGYILVW--TSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 7 ~~i~iw~~~~~~~--~~~~~~~~~~v~~i~~s~~~~~l~s~~-~d~~i~iw--~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
..|.+||+.+++. +..+.+| .....|+|||+.|+.++ .++.+.|| |+....... +... .......+|
T Consensus 228 ~~i~i~dl~tg~~~~l~~~~g~---~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~----lt~~-~~~~~~~~w 299 (429)
T PRK01742 228 SQLVVHDLRSGARKVVASFRGH---NGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTPSQ----LTSG-AGNNTEPSW 299 (429)
T ss_pred cEEEEEeCCCCceEEEecCCCc---cCceeECCCCCEEEEEEecCCcEEEEEEECCCCCeEe----eccC-CCCcCCEEE
Confidence 4699999987643 3334443 34689999999887764 67765555 555443322 1111 122345789
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+|++..++.+. ..++...||++
T Consensus 300 SpDG~~i~f~s-------~~~g~~~I~~~ 321 (429)
T PRK01742 300 SPDGQSILFTS-------DRSGSPQVYRM 321 (429)
T ss_pred CCCCCEEEEEE-------CCCCCceEEEE
Confidence 99999887765 45566777765
No 227
>KOG0649|consensus
Probab=98.33 E-value=5.8e-06 Score=50.19 Aligned_cols=72 Identities=11% Similarity=0.148 Sum_probs=48.5
Q ss_pred ccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEE
Q psy8803 28 HQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAV 107 (111)
Q Consensus 28 ~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~i 107 (111)
-.|.++-..|..+-++.++.|+.++.||+++++.... .+.+. .++.+++-......+ .+| +.||++++
T Consensus 115 PeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~---~rGHt-DYvH~vv~R~~~~qi-lsG-------~EDGtvRv 182 (325)
T KOG0649|consen 115 PEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQRE---YRGHT-DYVHSVVGRNANGQI-LSG-------AEDGTVRV 182 (325)
T ss_pred CccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEE---EcCCc-ceeeeeeecccCcce-eec-------CCCccEEE
Confidence 3688898999766666666799999999999865541 11111 233444443344454 456 89999999
Q ss_pred eecC
Q psy8803 108 FSLQ 111 (111)
Q Consensus 108 w~~~ 111 (111)
||.+
T Consensus 183 Wd~k 186 (325)
T KOG0649|consen 183 WDTK 186 (325)
T ss_pred Eecc
Confidence 9975
No 228
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.33 E-value=1.8e-05 Score=52.15 Aligned_cols=90 Identities=11% Similarity=0.117 Sum_probs=59.0
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeC---CCeEEEEecCCCceeeeecceeeeecCceeeEEEcc
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSK---DGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
..+.++|.. +.....+..+...+...+|+|||+.|+..+. ...|.+||+.++...... ... ......+|+|
T Consensus 176 ~~L~~~D~d-G~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~----~~~-g~~~~~~~SP 249 (427)
T PRK02889 176 YQLQISDAD-GQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVA----NFK-GSNSAPAWSP 249 (427)
T ss_pred cEEEEECCC-CCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEee----cCC-CCccceEECC
Confidence 356677764 4444455667788999999999998887653 245999999876543311 010 1123568999
Q ss_pred CCCEEEEeccccCCccccCceEEEee
Q psy8803 84 SDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
++..++.+. +.++...||.
T Consensus 250 DG~~la~~~-------~~~g~~~Iy~ 268 (427)
T PRK02889 250 DGRTLAVAL-------SRDGNSQIYT 268 (427)
T ss_pred CCCEEEEEE-------ccCCCceEEE
Confidence 999887765 4555566664
No 229
>KOG0280|consensus
Probab=98.32 E-value=1.5e-06 Score=53.73 Aligned_cols=57 Identities=21% Similarity=0.009 Sum_probs=47.9
Q ss_pred cccccCeeeecCCC-Cceeeee-eecccccEEEEEEcC-CCcEEEEEeCCCeEEEEecCC
Q psy8803 2 KSWYEEYKRLDYHT-PIVETEV-LTQHTHQVLHVSFSH-NGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 2 ~~~~d~~i~iw~~~-~~~~~~~-~~~~~~~v~~i~~s~-~~~~l~s~~~d~~i~iw~~~~ 58 (111)
+++.|+.+.-||++ +++.+.. .+-|...|.+|.-+| +...|++|+.|..|++||.++
T Consensus 183 tGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRn 242 (339)
T KOG0280|consen 183 TGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRN 242 (339)
T ss_pred ecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhc
Confidence 57899999999999 5554443 456889999998877 578999999999999999985
No 230
>KOG2321|consensus
Probab=98.31 E-value=3.3e-06 Score=56.44 Aligned_cols=94 Identities=11% Similarity=0.107 Sum_probs=65.2
Q ss_pred CcccccCeeeecCCCCceeeeeeec------ccc-----cEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee---eec
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQ------HTH-----QVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK---YSH 66 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~------~~~-----~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~---~~~ 66 (111)
|.+.-||.|..||.+....+..+.. |.+ .|.++.|+-+|-.++.|..+|.+.|+|++...+.. |..
T Consensus 191 a~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~ 270 (703)
T KOG2321|consen 191 ACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGY 270 (703)
T ss_pred EecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCC
Confidence 3566799999999998766655542 222 39999999999999999999999999999866543 322
Q ss_pred ceeeeecCceeeEEEccC--CCEEEEeccccCCccccCceEEEee
Q psy8803 67 DMKTFSWKYTQYSQFNES--DTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 67 ~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
. .|+..+.|.+. +..+ ++ .....++|||
T Consensus 271 e------~pi~~l~~~~~~~q~~v-~S--------~Dk~~~kiWd 300 (703)
T KOG2321|consen 271 E------LPIKKLDWQDTDQQNKV-VS--------MDKRILKIWD 300 (703)
T ss_pred c------cceeeecccccCCCceE-Ee--------cchHHhhhcc
Confidence 2 23334445443 3343 33 3467788887
No 231
>KOG1963|consensus
Probab=98.29 E-value=6.7e-06 Score=56.80 Aligned_cols=77 Identities=30% Similarity=0.524 Sum_probs=59.0
Q ss_pred cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecC--ceeeEEEccCCCEEEEeccccCCccccC
Q psy8803 25 QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWK--YTQYSQFNESDTLLLVSGVHFGTPQSTS 102 (111)
Q Consensus 25 ~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 102 (111)
.|+-.+.+.++||.+++++++..||+|.+|.-.... ........+.|+ .+++++|++++.++ .+| +.+
T Consensus 203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~--~~~~t~t~lHWH~~~V~~L~fS~~G~~L-lSG-------G~E 272 (792)
T KOG1963|consen 203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSS--DDSETCTLLHWHHDEVNSLSFSSDGAYL-LSG-------GRE 272 (792)
T ss_pred hhcccceeEEeccccceEEEeccCCcEEEEeccccc--cccccceEEEecccccceeEEecCCceE-eec-------ccc
Confidence 366778999999999999999999999999654311 111134556676 78889999999887 455 789
Q ss_pred ceEEEeecC
Q psy8803 103 GEIAVFSLQ 111 (111)
Q Consensus 103 ~~i~iw~~~ 111 (111)
+.+..|.+.
T Consensus 273 ~VLv~Wq~~ 281 (792)
T KOG1963|consen 273 GVLVLWQLE 281 (792)
T ss_pred eEEEEEeec
Confidence 999999763
No 232
>KOG2315|consensus
Probab=98.29 E-value=1.5e-05 Score=53.03 Aligned_cols=92 Identities=10% Similarity=0.056 Sum_probs=62.4
Q ss_pred eeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEe---CCCeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 8 YKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCS---KDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~---~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
.+.|+|.+ +.++..|. ++.=.++-|+|.|++|+-+| ..|.+-+||..+.+.+.. ..+ ...+...|+|+
T Consensus 295 kvtifnlr-~~~v~df~--egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~---~~a---~~tt~~eW~Pd 365 (566)
T KOG2315|consen 295 KVTIFNLR-GKPVFDFP--EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAK---FKA---ANTTVFEWSPD 365 (566)
T ss_pred eEEEEcCC-CCEeEeCC--CCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccc---ccc---CCceEEEEcCC
Confidence 34555655 45555442 45557889999999887765 468899999998655541 111 22345689999
Q ss_pred CCEEEEeccccCCccccCceEEEeec
Q psy8803 85 DTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+.+++++.+..+- -.|+.++||++
T Consensus 366 Ge~flTATTaPRl--rvdNg~Kiwhy 389 (566)
T KOG2315|consen 366 GEYFLTATTAPRL--RVDNGIKIWHY 389 (566)
T ss_pred CcEEEEEeccccE--EecCCeEEEEe
Confidence 9999877644333 45888999985
No 233
>KOG4532|consensus
Probab=98.26 E-value=1.9e-05 Score=48.57 Aligned_cols=95 Identities=11% Similarity=0.121 Sum_probs=61.4
Q ss_pred ccccCeeeecCCCCceeeeeeecccc--cEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeee---ecceeeeecCcee
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTH--QVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKY---SHDMKTFSWKYTQ 77 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~--~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~---~~~~~~~~~~~~~ 77 (111)
++.|.++++.++.-+...... |.. .+..+..++|++++++.++...+..|.+........ ..+-.. ...
T Consensus 134 ~sndht~k~~~~~~~s~~~~~--h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D----~gF 207 (344)
T KOG4532|consen 134 ASNDHTGKTMVVSGDSNKFAV--HNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSD----HGF 207 (344)
T ss_pred ccCCcceeEEEEecCccccee--eccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCC----Cce
Confidence 466777777776533221111 322 377889999999999999999999998875332211 111111 123
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+..|+..+..+++ + ..|+++.|||+|
T Consensus 208 ~~S~s~~~~~FAv-~-------~Qdg~~~I~DVR 233 (344)
T KOG4532|consen 208 YNSFSENDLQFAV-V-------FQDGTCAIYDVR 233 (344)
T ss_pred eeeeccCcceEEE-E-------ecCCcEEEEEec
Confidence 5677777666544 4 789999999986
No 234
>KOG2321|consensus
Probab=98.25 E-value=7.3e-06 Score=54.86 Aligned_cols=91 Identities=13% Similarity=0.226 Sum_probs=64.8
Q ss_pred CCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee---eecceeeee----cCceeeEEEccCC
Q psy8803 13 YHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK---YSHDMKTFS----WKYTQYSQFNESD 85 (111)
Q Consensus 13 ~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~---~~~~~~~~~----~~~~~~v~~~~~~ 85 (111)
++.+|.-+.-|....+.+.++..++...+|++|+.++.+-.||.+...... ....+.... ...++.++|+-++
T Consensus 161 NLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~g 240 (703)
T KOG2321|consen 161 NLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDG 240 (703)
T ss_pred EccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCc
Confidence 455566565566566889999999999999999999999999998754332 111221111 1236788999776
Q ss_pred CEEEEeccccCCccccCceEEEeecC
Q psy8803 86 TLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
-.+ +.| ...|.|.|+|||
T Consensus 241 L~~-aVG-------ts~G~v~iyDLR 258 (703)
T KOG2321|consen 241 LHV-AVG-------TSTGSVLIYDLR 258 (703)
T ss_pred eeE-Eee-------ccCCcEEEEEcc
Confidence 554 556 778999999986
No 235
>KOG1240|consensus
Probab=98.23 E-value=1.9e-05 Score=56.95 Aligned_cols=90 Identities=17% Similarity=0.175 Sum_probs=61.7
Q ss_pred cCCCCceeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCcee---eeecceeeeecCceeeEEEccCCCE
Q psy8803 12 DYHTPIVETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKV---KYSHDMKTFSWKYTQYSQFNESDTL 87 (111)
Q Consensus 12 w~~~~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~ 87 (111)
|..+ |..+.++..|...+..++.+++ +.+|++|+.||++++|+.+..... ..+........+.+..+.+.+.+..
T Consensus 1034 W~p~-G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~ 1112 (1431)
T KOG1240|consen 1034 WNPR-GILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQ 1112 (1431)
T ss_pred CCcc-ceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCe
Confidence 5554 7788888889999998888775 599999999999999998752211 1111111112234556777777777
Q ss_pred EEEeccccCCccccCceEEEeec
Q psy8803 88 LLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 88 ~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
++++ +.||.|++.++
T Consensus 1113 ~Av~--------t~DG~v~~~~i 1127 (1431)
T KOG1240|consen 1113 FAVS--------TKDGSVRVLRI 1127 (1431)
T ss_pred EEEE--------cCCCeEEEEEc
Confidence 6553 57888988765
No 236
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.21 E-value=6.3e-05 Score=49.65 Aligned_cols=93 Identities=12% Similarity=0.098 Sum_probs=58.9
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEe---CCCeEEEEecCCCceeeeecceeeeecCceeeEEEcc
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCS---KDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~---~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
..+.++|..... ...+..+...+....|+|||+.|+..+ .+..+.+|++..+....-. ... ......+|+|
T Consensus 179 ~~l~~~d~dg~~-~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~-~~~----~~~~~~~~SP 252 (429)
T PRK03629 179 YELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA-SFP----RHNGAPAFSP 252 (429)
T ss_pred eeEEEEcCCCCC-CEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEcc-CCC----CCcCCeEECC
Confidence 368888887443 334455667899999999999887653 2357889998776533211 111 1122468999
Q ss_pred CCCEEEEeccccCCccccCceEEEeec
Q psy8803 84 SDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
++..++.+... .....|.+||+
T Consensus 253 DG~~La~~~~~-----~g~~~I~~~d~ 274 (429)
T PRK03629 253 DGSKLAFALSK-----TGSLNLYVMDL 274 (429)
T ss_pred CCCEEEEEEcC-----CCCcEEEEEEC
Confidence 99988876411 11234778876
No 237
>KOG0642|consensus
Probab=98.15 E-value=7.1e-06 Score=54.47 Aligned_cols=80 Identities=18% Similarity=0.265 Sum_probs=59.0
Q ss_pred eeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCC-----ceeeeecceeeeecCceeeEEEccCCCEEEEeccccC
Q psy8803 22 VLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYP-----SKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFG 96 (111)
Q Consensus 22 ~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 96 (111)
++..|...+..+.|.|....|++++.|++|++|++... ..+......+.+. .|+.+++..+.+.++ .+|
T Consensus 289 tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~-gPVl~v~v~~n~~~~-ysg---- 362 (577)
T KOG0642|consen 289 TLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHE-GPVLCVVVPSNGEHC-YSG---- 362 (577)
T ss_pred eeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEeccc-CceEEEEecCCceEE-Eee----
Confidence 55678899999999999999999999999999999321 1111111223333 577788888888776 555
Q ss_pred CccccCceEEEeec
Q psy8803 97 TPQSTSGEIAVFSL 110 (111)
Q Consensus 97 ~~~~~~~~i~iw~~ 110 (111)
+.|+.|+.|++
T Consensus 363 ---g~Dg~I~~w~~ 373 (577)
T KOG0642|consen 363 ---GIDGTIRCWNL 373 (577)
T ss_pred ---ccCceeeeecc
Confidence 78999999976
No 238
>KOG1523|consensus
Probab=98.15 E-value=2.5e-05 Score=48.95 Aligned_cols=94 Identities=21% Similarity=0.150 Sum_probs=64.2
Q ss_pred cccCeeeecCCCCc---eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCC---ceeeeec-ceeeeecCce
Q psy8803 4 WYEEYKRLDYHTPI---VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYP---SKVKYSH-DMKTFSWKYT 76 (111)
Q Consensus 4 ~~d~~i~iw~~~~~---~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~---~~~~~~~-~~~~~~~~~~ 76 (111)
+-|.--.+|...++ ++...|..++..+.++.|+|..+.|+.++..+.|.||=++.. ..-+|.. +++ +.+
T Consensus 74 s~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPir----Stv 149 (361)
T KOG1523|consen 74 SHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIR----STV 149 (361)
T ss_pred cCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccc----cce
Confidence 44566677887433 455556679999999999999999999999999999877542 2222211 111 334
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEee
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
+++.|+|+. .+++.| +.|++++|+.
T Consensus 150 ~sldWhpnn-VLlaaG-------s~D~k~rVfS 174 (361)
T KOG1523|consen 150 TSLDWHPNN-VLLAAG-------STDGKCRVFS 174 (361)
T ss_pred eeeeccCCc-ceeccc-------ccCcceeEEE
Confidence 455566665 555666 8899998874
No 239
>KOG1409|consensus
Probab=98.14 E-value=2.2e-05 Score=49.70 Aligned_cols=79 Identities=14% Similarity=0.284 Sum_probs=57.4
Q ss_pred ceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCce-----eeeecceeeeecCceeeEEEccCCCEEEEe
Q psy8803 17 IVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSK-----VKYSHDMKTFSWKYTQYSQFNESDTLLLVS 91 (111)
Q Consensus 17 ~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 91 (111)
..++.++.+|.+.+.+++|.+..+.|.++..|.++.+||+-...- ..|...+..+ ..-+--..+ .+
T Consensus 187 ~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l--------~~~~~t~~l-~S 257 (404)
T KOG1409|consen 187 CQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQAL--------SYAQHTRQL-IS 257 (404)
T ss_pred CceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhh--------hhhhhheee-ee
Confidence 467888899999999999999999999999999999999965432 2243344332 222233343 44
Q ss_pred ccccCCccccCceEEEeecC
Q psy8803 92 GVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 92 ~~~~~~~~~~~~~i~iw~~~ 111 (111)
+ +.|+.|.+||+.
T Consensus 258 ~-------~edg~i~~w~mn 270 (404)
T KOG1409|consen 258 C-------GEDGGIVVWNMN 270 (404)
T ss_pred c-------cCCCeEEEEecc
Confidence 4 689999999974
No 240
>KOG4190|consensus
Probab=98.13 E-value=5.2e-06 Score=55.68 Aligned_cols=58 Identities=19% Similarity=0.247 Sum_probs=47.6
Q ss_pred cccccCeeeecCCCCc-------eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCce
Q psy8803 2 KSWYEEYKRLDYHTPI-------VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSK 61 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~-------~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~ 61 (111)
+.+.|.+|++|.+++. .+..+++.|...|..+.|-.+-+.++++ |+-|.+||..-+..
T Consensus 752 SASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~giHlWDPFigr~ 816 (1034)
T KOG4190|consen 752 SASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGGIHLWDPFIGRL 816 (1034)
T ss_pred eccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCcceeecccccch
Confidence 4678999999999753 4677788999999999999888888665 68899999875543
No 241
>KOG1645|consensus
Probab=98.11 E-value=1.8e-05 Score=50.98 Aligned_cols=91 Identities=10% Similarity=0.087 Sum_probs=64.6
Q ss_pred eeecCCCCceeeeeeecccccEEEEEEcCCCc-EEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCE
Q psy8803 9 KRLDYHTPIVETEVLTQHTHQVLHVSFSHNGR-YFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTL 87 (111)
Q Consensus 9 i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 87 (111)
+++.+..+-+...-+.++...|..++|+|..+ ++..++.+.+|+|.|+++......- ... .++-+++|.-++.+
T Consensus 175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy-~a~----~~~wSC~wDlde~h 249 (463)
T KOG1645|consen 175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSY-IAY----NQIWSCCWDLDERH 249 (463)
T ss_pred eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeehe-ecc----CCceeeeeccCCcc
Confidence 33434333333334556788999999999876 7888899999999999986554310 111 22335777888888
Q ss_pred EEEeccccCCccccCceEEEeecC
Q psy8803 88 LLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 88 ~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.+.+| -..|.|.|+|+|
T Consensus 250 ~IYaG-------l~nG~VlvyD~R 266 (463)
T KOG1645|consen 250 VIYAG-------LQNGMVLVYDMR 266 (463)
T ss_pred eeEEe-------ccCceEEEEEcc
Confidence 89988 888999999986
No 242
>KOG1064|consensus
Probab=98.06 E-value=2.4e-05 Score=58.45 Aligned_cols=102 Identities=18% Similarity=0.249 Sum_probs=74.0
Q ss_pred cccccCeeeecCCCCceeeeeee-cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee---eec-----------
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLT-QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK---YSH----------- 66 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~---~~~----------- 66 (111)
|++.||.+++|.-..+..+..+. +-+..|..+.|+.+|+.+..+..||.+-+|......... |..
T Consensus 2225 tgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~pk~~~s~qchnk~~~Df~Fi~s~ 2304 (2439)
T KOG1064|consen 2225 TGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQASPKPYTSWQCHNKALSDFRFIGSL 2304 (2439)
T ss_pred ecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccCCcceeccccCCccccceeeeehh
Confidence 78899999999999888888775 233889999999999999999999999999886421100 000
Q ss_pred -------------------------ceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 67 -------------------------DMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 67 -------------------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
-+....-...+.+++.|....+ .+| +.+|.|++||+|
T Consensus 2305 ~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qll-isg-------gr~G~v~l~D~r 2366 (2439)
T KOG1064|consen 2305 LATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLL-ISG-------GRKGEVCLFDIR 2366 (2439)
T ss_pred hhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEE-Eec-------CCcCcEEEeehH
Confidence 0000111234667888877655 666 899999999985
No 243
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.04 E-value=0.00024 Score=46.79 Aligned_cols=92 Identities=15% Similarity=0.112 Sum_probs=57.1
Q ss_pred eeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCC---CeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 8 YKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKD---GYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
.+.++|...+. ...+..+...+....|+|||+.|+..+.+ ..|.+|++.++...... ... ......+|+|+
T Consensus 180 ~l~~~d~~g~~-~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~-~~~----g~~~~~~~SpD 253 (430)
T PRK00178 180 TLQRSDYDGAR-AVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQIT-NFE----GLNGAPAWSPD 253 (430)
T ss_pred EEEEECCCCCC-ceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEcc-CCC----CCcCCeEECCC
Confidence 46777776433 44455567788999999999988776533 36888898876543311 011 11224678999
Q ss_pred CCEEEEeccccCCccccCceEEEeec
Q psy8803 85 DTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+..++.+... .....|.++|+
T Consensus 254 G~~la~~~~~-----~g~~~Iy~~d~ 274 (430)
T PRK00178 254 GSKLAFVLSK-----DGNPEIYVMDL 274 (430)
T ss_pred CCEEEEEEcc-----CCCceEEEEEC
Confidence 9888765411 11235777675
No 244
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.03 E-value=0.00023 Score=46.56 Aligned_cols=93 Identities=18% Similarity=0.172 Sum_probs=58.4
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCC---CeEEEEecCCCceeeeecceeeeecCceeeEEEcc
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKD---GYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
..+.++|.. +.....+..+...+....|+||++.|+..... ..|.+|++.++...... ... ......+|+|
T Consensus 170 ~~l~~~d~~-g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~----~~~-~~~~~~~~sp 243 (417)
T TIGR02800 170 YELQVADYD-GANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVA----SFP-GMNGAPAFSP 243 (417)
T ss_pred ceEEEEcCC-CCCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEee----cCC-CCccceEECC
Confidence 346777765 33344555566678899999999988877543 47999999876443211 111 1223468899
Q ss_pred CCCEEEEeccccCCccccCceEEEeec
Q psy8803 84 SDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
++..++++... .....|.+||+
T Consensus 244 Dg~~l~~~~~~-----~~~~~i~~~d~ 265 (417)
T TIGR02800 244 DGSKLAVSLSK-----DGNPDIYVMDL 265 (417)
T ss_pred CCCEEEEEECC-----CCCccEEEEEC
Confidence 99888765411 11234777765
No 245
>KOG2695|consensus
Probab=97.98 E-value=3.1e-05 Score=49.13 Aligned_cols=95 Identities=11% Similarity=0.048 Sum_probs=62.2
Q ss_pred ccCeeeecCCCCc-----eeeeeeecccccEEEEEEcC-CCcEEEEEeCCCeEEEEecCCCce----eeeecceeeeecC
Q psy8803 5 YEEYKRLDYHTPI-----VETEVLTQHTHQVLHVSFSH-NGRYFATCSKDGYILVWTSSYPSK----VKYSHDMKTFSWK 74 (111)
Q Consensus 5 ~d~~i~iw~~~~~-----~~~~~~~~~~~~v~~i~~s~-~~~~l~s~~~d~~i~iw~~~~~~~----~~~~~~~~~~~~~ 74 (111)
-+|.|-..|++.+ .+...+. |.+.|.++.--. +++.|...+.+++|++||.+..++ +.+.+-++..+.
T Consensus 272 RngeI~~iDLR~rnqG~~~~a~rly-h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~- 349 (425)
T KOG2695|consen 272 RNGEIFVIDLRCRNQGNGWCAQRLY-HDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAY- 349 (425)
T ss_pred cCCcEEEEEeeecccCCCcceEEEE-cCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccc-
Confidence 3567777888743 3455555 889999988766 788999999999999999987544 223333333221
Q ss_pred ceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 75 YTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
..+-..++. .++.++ +.|-..+||.++
T Consensus 350 --l~~~v~~ee-g~I~s~-------GdDcytRiWsl~ 376 (425)
T KOG2695|consen 350 --LPAHVKEEE-GSIFSV-------GDDCYTRIWSLD 376 (425)
T ss_pred --ccccccccc-ceEEEc-------cCeeEEEEEecc
Confidence 112223333 444555 789999999864
No 246
>PRK05137 tolB translocation protein TolB; Provisional
Probab=97.96 E-value=0.0002 Score=47.31 Aligned_cols=81 Identities=10% Similarity=0.098 Sum_probs=52.3
Q ss_pred cCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEE-EEeCCCe--EEEEecCCCceeeeecceeeeecCceeeEEEc
Q psy8803 6 EEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFA-TCSKDGY--ILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFN 82 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~-s~~~d~~--i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 82 (111)
+..|.+||+.+++.. .+..+.+.+....|+|||+.|+ +.+.++. |.++|+.+........ .. ......+|+
T Consensus 225 ~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~-~~----~~~~~~~~s 298 (435)
T PRK05137 225 RPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTTRLTD-SP----AIDTSPSYS 298 (435)
T ss_pred CCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCceEEccC-CC----CccCceeEc
Confidence 467999999877543 3455566777889999998765 5555554 7777887655433111 00 122346789
Q ss_pred cCCCEEEEec
Q psy8803 83 ESDTLLLVSG 92 (111)
Q Consensus 83 ~~~~~~~~~~ 92 (111)
|++..++.+.
T Consensus 299 pDG~~i~f~s 308 (435)
T PRK05137 299 PDGSQIVFES 308 (435)
T ss_pred CCCCEEEEEE
Confidence 9998887654
No 247
>KOG1334|consensus
Probab=97.94 E-value=2.1e-05 Score=51.72 Aligned_cols=103 Identities=12% Similarity=0.036 Sum_probs=70.6
Q ss_pred CcccccCeeeecCCCCceeeeee-ecccccEEEEEEcCC--CcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCcee
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVL-TQHTHQVLHVSFSHN--GRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQ 77 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~-~~~~~~v~~i~~s~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 77 (111)
++++.|..|-+||-..++....+ .+|...|....|-|. .+.|++++.||.+++=.+..............+. .++.
T Consensus 158 ~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~~e~t~rl~~h~-g~vh 236 (559)
T KOG1334|consen 158 ASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILETGYVENTKRLAPHE-GPVH 236 (559)
T ss_pred eccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeeeccccceecceeccccc-Cccc
Confidence 57889999999999988877766 489999999999884 6789999999999887765322221111111111 2344
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.++.-|...+-+.++ +.|+.+.-.|+|
T Consensus 237 klav~p~sp~~f~S~-------geD~~v~~~Dlr 263 (559)
T KOG1334|consen 237 KLAVEPDSPKPFLSC-------GEDAVVFHIDLR 263 (559)
T ss_pred eeeecCCCCCccccc-------ccccceeeeeec
Confidence 455566666556666 677777766654
No 248
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=97.94 E-value=3.2e-05 Score=33.49 Aligned_cols=28 Identities=25% Similarity=0.414 Sum_probs=22.1
Q ss_pred CceeeEEEccCCCEEEEeccccCCccccCceEEEee
Q psy8803 74 KYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 74 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
.++++++|+|++..++ ++ +.|+.|++||
T Consensus 12 ~~i~~i~~~~~~~~~~-s~-------~~D~~i~vwd 39 (39)
T PF00400_consen 12 SSINSIAWSPDGNFLA-SG-------SSDGTIRVWD 39 (39)
T ss_dssp SSEEEEEEETTSSEEE-EE-------ETTSEEEEEE
T ss_pred CcEEEEEEecccccce-ee-------CCCCEEEEEC
Confidence 4567788898977764 45 7899999997
No 249
>KOG2315|consensus
Probab=97.91 E-value=0.00045 Score=46.28 Aligned_cols=89 Identities=17% Similarity=0.173 Sum_probs=60.8
Q ss_pred eeecCCCCceeeeeeecccccEEEEEEcCCCcEEEE--EeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCC
Q psy8803 9 KRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFAT--CSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDT 86 (111)
Q Consensus 9 i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s--~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 86 (111)
+.+.++........+. -.+.|.++.|+|+++.++. |-...++.|+|++.....-.. -.|-+++-|+|.+.
T Consensus 253 Lyll~t~g~s~~V~L~-k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~~v~df~-------egpRN~~~fnp~g~ 324 (566)
T KOG2315|consen 253 LYLLATQGESVSVPLL-KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGKPVFDFP-------EGPRNTAFFNPHGN 324 (566)
T ss_pred EEEEEecCceEEEecC-CCCCceEEEECCCCCEEEEEEecccceEEEEcCCCCEeEeCC-------CCCccceEECCCCC
Confidence 4444444223333333 4789999999999976655 457789999999876544311 14456777899999
Q ss_pred EEEEeccccCCccccCceEEEeec
Q psy8803 87 LLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.++.+|.+.. .|.|.|||+
T Consensus 325 ii~lAGFGNL-----~G~mEvwDv 343 (566)
T KOG2315|consen 325 IILLAGFGNL-----PGDMEVWDV 343 (566)
T ss_pred EEEEeecCCC-----CCceEEEec
Confidence 9988885443 456999997
No 250
>KOG4547|consensus
Probab=97.87 E-value=0.00031 Score=47.09 Aligned_cols=95 Identities=12% Similarity=-0.003 Sum_probs=72.5
Q ss_pred ccccCeeeecCCCCceeeeeee--cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLT--QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
+-..|.|.+|+...++...++. .|.+.|.++.++.+-..|.+++.|+.+-.|+....+........ -..+.+++
T Consensus 76 gt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~----~~~~~sl~ 151 (541)
T KOG4547|consen 76 GTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQ----KPLVSSLC 151 (541)
T ss_pred ecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccC----CCccceEE
Confidence 4567889999999998888886 58999999999999999999999999999999876655421111 13355678
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.+|++..+++ + .++|++||++
T Consensus 152 is~D~~~l~~-a---------s~~ik~~~~~ 172 (541)
T KOG4547|consen 152 ISPDGKILLT-A---------SRQIKVLDIE 172 (541)
T ss_pred EcCCCCEEEe-c---------cceEEEEEcc
Confidence 8888655543 3 5789999864
No 251
>KOG4714|consensus
Probab=97.87 E-value=6e-06 Score=50.47 Aligned_cols=57 Identities=21% Similarity=0.299 Sum_probs=49.7
Q ss_pred cccccCeeeecCCCCce-eeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCC
Q psy8803 2 KSWYEEYKRLDYHTPIV-ETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~-~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~ 58 (111)
.+..||.+.+||.+... +...++.|...++.+-|+|. ...|+++++||.+-.||..+
T Consensus 197 cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 197 CGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred EecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 46789999999999774 55567899999999999994 78999999999999999874
No 252
>PRK03629 tolB translocation protein TolB; Provisional
Probab=97.86 E-value=0.0004 Score=45.96 Aligned_cols=81 Identities=11% Similarity=0.041 Sum_probs=49.4
Q ss_pred cCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEE-eCCC--eEEEEecCCCceeeeecceeeeecCceeeEEEc
Q psy8803 6 EEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATC-SKDG--YILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFN 82 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~-~~d~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 82 (111)
+..+.+|++..++... +....+.+....|+|||+.|+.. ..++ .|.+||+.++........ ........|+
T Consensus 222 ~~~i~i~dl~~G~~~~-l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~-----~~~~~~~~wS 295 (429)
T PRK03629 222 RSALVIQTLANGAVRQ-VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG-----RSNNTEPTWF 295 (429)
T ss_pred CcEEEEEECCCCCeEE-ccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEccCC-----CCCcCceEEC
Confidence 3467888887664322 22222334568999999877754 3344 588899887654432111 0123456889
Q ss_pred cCCCEEEEec
Q psy8803 83 ESDTLLLVSG 92 (111)
Q Consensus 83 ~~~~~~~~~~ 92 (111)
|++..++.+.
T Consensus 296 PDG~~I~f~s 305 (429)
T PRK03629 296 PDSQNLAYTS 305 (429)
T ss_pred CCCCEEEEEe
Confidence 9998887665
No 253
>PRK04922 tolB translocation protein TolB; Provisional
Probab=97.83 E-value=0.00046 Score=45.65 Aligned_cols=80 Identities=15% Similarity=0.132 Sum_probs=50.3
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEE-EEeCCC--eEEEEecCCCceeeeecceeeeecCceeeEEEcc
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFA-TCSKDG--YILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~-s~~~d~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
..+.+||+..++.. .+....+......|+|||+.|+ +.+.++ .|.+||+.++........ .......+|+|
T Consensus 228 ~~l~~~dl~~g~~~-~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~~-----~~~~~~~~~sp 301 (433)
T PRK04922 228 SAIYVQDLATGQRE-LVASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLTRLTNH-----FGIDTEPTWAP 301 (433)
T ss_pred cEEEEEECCCCCEE-EeccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeEECccC-----CCCccceEECC
Confidence 46888898776543 2333444556789999998665 445544 589999887654331110 01123468899
Q ss_pred CCCEEEEec
Q psy8803 84 SDTLLLVSG 92 (111)
Q Consensus 84 ~~~~~~~~~ 92 (111)
++..++.+.
T Consensus 302 DG~~l~f~s 310 (433)
T PRK04922 302 DGKSIYFTS 310 (433)
T ss_pred CCCEEEEEE
Confidence 998887765
No 254
>KOG2695|consensus
Probab=97.80 E-value=3.9e-05 Score=48.71 Aligned_cols=62 Identities=10% Similarity=0.008 Sum_probs=47.5
Q ss_pred cccccCeeeecCCCCcee---eeeeecccccEEEEE--EcCCCcEEEEEeCCCeEEEEecCCCceee
Q psy8803 2 KSWYEEYKRLDYHTPIVE---TEVLTQHTHQVLHVS--FSHNGRYFATCSKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~---~~~~~~~~~~v~~i~--~s~~~~~l~s~~~d~~i~iw~~~~~~~~~ 63 (111)
+|..+|+|++||.+-.++ +...+||-..-.-+- ..+....++++++|+..+||.++.+..+.
T Consensus 316 aS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~ 382 (425)
T KOG2695|consen 316 ASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLC 382 (425)
T ss_pred eccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceee
Confidence 578899999999987665 888888854433333 35566778889999999999999876554
No 255
>KOG4714|consensus
Probab=97.79 E-value=3.5e-05 Score=47.24 Aligned_cols=86 Identities=12% Similarity=0.120 Sum_probs=53.9
Q ss_pred eeecCCCCceeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCcee-----eeecceeeeecCceeeEEEc
Q psy8803 9 KRLDYHTPIVETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKV-----KYSHDMKTFSWKYTQYSQFN 82 (111)
Q Consensus 9 i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~-----~~~~~~~~~~~~~~~~v~~~ 82 (111)
.+.|++.+.+.+..-......|.+++-+|. .+++++|++||.+-+||.++..-. .|..+++ -|-|+
T Consensus 161 ~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~--------eV~FH 232 (319)
T KOG4714|consen 161 FYANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIW--------EVHFH 232 (319)
T ss_pred eeeecccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhh--------heecc
Confidence 345555544322221222344899999996 567777889999999999975211 1444444 45567
Q ss_pred c-CCCEEEEeccccCCccccCceEEEeec
Q psy8803 83 E-SDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 83 ~-~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
| +..+++++ +.||.+--||-
T Consensus 233 pk~p~~Lft~--------sedGslw~wda 253 (319)
T KOG4714|consen 233 PKNPEHLFTC--------SEDGSLWHWDA 253 (319)
T ss_pred CCCchheeEe--------cCCCcEEEEcC
Confidence 7 44566553 67888888873
No 256
>PRK02889 tolB translocation protein TolB; Provisional
Probab=97.79 E-value=0.00032 Score=46.37 Aligned_cols=80 Identities=13% Similarity=0.097 Sum_probs=48.6
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEE-EEeCCCeEEEEec--CCCceeeeecceeeeecCceeeEEEcc
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFA-TCSKDGYILVWTS--SYPSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~-s~~~d~~i~iw~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
..|.+||+.+++.. .+....+......|+|||+.|+ +.+.++...+|.+ ....... +... ........|+|
T Consensus 220 ~~I~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~----lt~~-~~~~~~~~wSp 293 (427)
T PRK02889 220 PVVYVHDLATGRRR-VVANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSGLRR----LTQS-SGIDTEPFFSP 293 (427)
T ss_pred cEEEEEECCCCCEE-EeecCCCCccceEECCCCCEEEEEEccCCCceEEEEECCCCCcEE----CCCC-CCCCcCeEEcC
Confidence 45888999877643 2333345567889999998776 5667777666655 3333221 1100 01123457899
Q ss_pred CCCEEEEec
Q psy8803 84 SDTLLLVSG 92 (111)
Q Consensus 84 ~~~~~~~~~ 92 (111)
++..++.+.
T Consensus 294 DG~~l~f~s 302 (427)
T PRK02889 294 DGRSIYFTS 302 (427)
T ss_pred CCCEEEEEe
Confidence 998887654
No 257
>KOG3881|consensus
Probab=97.78 E-value=4.8e-05 Score=48.77 Aligned_cols=61 Identities=10% Similarity=-0.031 Sum_probs=52.5
Q ss_pred ccccCeeeecCCCCceeeee-eecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee
Q psy8803 3 SWYEEYKRLDYHTPIVETEV-LTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~-~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~ 63 (111)
+..-+.+..+|.+.++.... +++..+.+..+-.+|.+.+++++|.|+.++|+|+.+.....
T Consensus 265 gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~ 326 (412)
T KOG3881|consen 265 GNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLH 326 (412)
T ss_pred ecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhh
Confidence 34557788899999987776 88999999999999999999999999999999999855443
No 258
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=97.78 E-value=0.0027 Score=41.42 Aligned_cols=60 Identities=12% Similarity=0.052 Sum_probs=45.6
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEe-CCCeEEEEecCCCceee
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCS-KDGYILVWTSSYPSKVK 63 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~-~d~~i~iw~~~~~~~~~ 63 (111)
++.||.+.++|+.+.+.+..+.. ......+++++||++++.+. .++.+.++|.++.+..+
T Consensus 54 ~~rdg~vsviD~~~~~~v~~i~~-G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~ 114 (369)
T PF02239_consen 54 ANRDGTVSVIDLATGKVVATIKV-GGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVK 114 (369)
T ss_dssp EETTSEEEEEETTSSSEEEEEE--SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEE
T ss_pred EcCCCeEEEEECCcccEEEEEec-CCCcceEEEcCCCCEEEEEecCCCceeEecccccccee
Confidence 35689999999999998888863 44568899999999888765 68899999999876665
No 259
>KOG1354|consensus
Probab=97.76 E-value=0.0001 Score=46.89 Aligned_cols=78 Identities=17% Similarity=0.316 Sum_probs=52.5
Q ss_pred cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC-Cceee----eecceeeeecCceeeEEEccCCCEEEEeccccCCcc
Q psy8803 25 QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY-PSKVK----YSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQ 99 (111)
Q Consensus 25 ~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~-~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 99 (111)
+|+..|..+++..|+..++++. |-+|.+|+++- .+.+. ....+-.+. .-+++..|+|....+++=.
T Consensus 162 aHtyhiNSIS~NsD~Et~lSAD-dLRINLWnlei~d~sFnIVDIKP~nmEeLt-eVITsaEFhp~~cn~f~YS------- 232 (433)
T KOG1354|consen 162 AHTYHINSISVNSDKETFLSAD-DLRINLWNLEIIDQSFNIVDIKPANMEELT-EVITSAEFHPHHCNVFVYS------- 232 (433)
T ss_pred cceeEeeeeeecCccceEeecc-ceeeeeccccccCCceeEEEccccCHHHHH-HHHhhhccCHhHccEEEEe-------
Confidence 4788899999999999998886 67999999874 22221 000111111 1245668999766555544
Q ss_pred ccCceEEEeecC
Q psy8803 100 STSGEIAVFSLQ 111 (111)
Q Consensus 100 ~~~~~i~iw~~~ 111 (111)
+..|+|++.|||
T Consensus 233 SSKGtIrLcDmR 244 (433)
T KOG1354|consen 233 SSKGTIRLCDMR 244 (433)
T ss_pred cCCCcEEEeech
Confidence 678999999987
No 260
>PRK04792 tolB translocation protein TolB; Provisional
Probab=97.75 E-value=0.00075 Score=44.95 Aligned_cols=79 Identities=14% Similarity=0.100 Sum_probs=48.6
Q ss_pred eeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeC-CC--eEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 8 YKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSK-DG--YILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~-d~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
.+.++|..... ...+..+...+....|+|||+.|+..+. ++ .|.++|+.++...... ... ......+|+|+
T Consensus 199 ~l~i~d~dG~~-~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt-~~~----g~~~~~~wSPD 272 (448)
T PRK04792 199 QLMIADYDGYN-EQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVT-SFP----GINGAPRFSPD 272 (448)
T ss_pred EEEEEeCCCCC-ceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEec-CCC----CCcCCeeECCC
Confidence 45555654332 3344555667888999999998876543 33 5888888776543211 111 11224688999
Q ss_pred CCEEEEec
Q psy8803 85 DTLLLVSG 92 (111)
Q Consensus 85 ~~~~~~~~ 92 (111)
+..++.+.
T Consensus 273 G~~La~~~ 280 (448)
T PRK04792 273 GKKLALVL 280 (448)
T ss_pred CCEEEEEE
Confidence 99887765
No 261
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.73 E-value=0.0013 Score=48.10 Aligned_cols=74 Identities=14% Similarity=0.109 Sum_probs=52.0
Q ss_pred EEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeec---------ceeeeecCceeeEEEccCCCEEEEeccccCCccc
Q psy8803 30 VLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSH---------DMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQS 100 (111)
Q Consensus 30 v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 100 (111)
-..++++++|+++++-..+++|++||..+........ ......+.....+++++++.. +++- .
T Consensus 806 P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~l-yVaD-------t 877 (1057)
T PLN02919 806 PLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRL-FVAD-------T 877 (1057)
T ss_pred CceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCE-EEEE-------C
Confidence 3578999999999999999999999998765432111 011112234668899998864 4554 6
Q ss_pred cCceEEEeecC
Q psy8803 101 TSGEIAVFSLQ 111 (111)
Q Consensus 101 ~~~~i~iw~~~ 111 (111)
.++.|++||++
T Consensus 878 ~Nn~Irvid~~ 888 (1057)
T PLN02919 878 NNSLIRYLDLN 888 (1057)
T ss_pred CCCEEEEEECC
Confidence 78889999974
No 262
>KOG0309|consensus
Probab=97.72 E-value=0.00012 Score=50.83 Aligned_cols=99 Identities=23% Similarity=0.295 Sum_probs=68.9
Q ss_pred cccccCeeeecCCCC---ceeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCcee
Q psy8803 2 KSWYEEYKRLDYHTP---IVETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQ 77 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~---~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 77 (111)
++.....--+|++.. ......+-+|...|..+.|.|. -..+++++-|..+..||++......+....+. +...
T Consensus 86 Vsts~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~---s~as 162 (1081)
T KOG0309|consen 86 VSTSNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWR---SAAS 162 (1081)
T ss_pred EecCcchhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeeccc---ccCc
Confidence 344555566777752 2344456789999999999996 56899999999999999998765543222222 2334
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.|+++-.+..++++ +..+-|.+||+|
T Consensus 163 qVkwnyk~p~vlas--------shg~~i~vwd~r 188 (1081)
T KOG0309|consen 163 QVKWNYKDPNVLAS--------SHGNDIFVWDLR 188 (1081)
T ss_pred eeeecccCcchhhh--------ccCCceEEEecc
Confidence 67777766666553 567779999975
No 263
>KOG1538|consensus
Probab=97.68 E-value=0.00026 Score=48.86 Aligned_cols=65 Identities=12% Similarity=0.274 Sum_probs=47.8
Q ss_pred cEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee----eecceeeeecCceeeEEEccCCCEEEEeccccCCccccCce
Q psy8803 29 QVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK----YSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGE 104 (111)
Q Consensus 29 ~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (111)
.|..++|-|||..|+-+.. .++.+||...+..++ |...+ ++|+++.++.. +++| +.|..
T Consensus 14 ci~d~afkPDGsqL~lAAg-~rlliyD~ndG~llqtLKgHKDtV--------ycVAys~dGkr-FASG-------~aDK~ 76 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAG-SRLLVYDTSDGTLLQPLKGHKDTV--------YCVAYAKDGKR-FASG-------SADKS 76 (1081)
T ss_pred chheeEECCCCceEEEecC-CEEEEEeCCCcccccccccccceE--------EEEEEccCCce-eccC-------CCcee
Confidence 7889999999876666553 478999998876554 44444 45566667665 5777 88999
Q ss_pred EEEeec
Q psy8803 105 IAVFSL 110 (111)
Q Consensus 105 i~iw~~ 110 (111)
|-+|+-
T Consensus 77 VI~W~~ 82 (1081)
T KOG1538|consen 77 VIIWTS 82 (1081)
T ss_pred EEEecc
Confidence 999974
No 264
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=97.66 E-value=0.0031 Score=42.16 Aligned_cols=99 Identities=6% Similarity=0.003 Sum_probs=68.6
Q ss_pred ccccC-eeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 3 SWYEE-YKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 3 ~~~d~-~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
+..|| .+-|+|...++ ...+...-+.|.++..+++|..++.+.....|-+.|+.++....-.. .....++...+
T Consensus 377 gt~dgD~l~iyd~~~~e-~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idk----S~~~lItdf~~ 451 (668)
T COG4946 377 GTNDGDKLGIYDKDGGE-VKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDK----SEYGLITDFDW 451 (668)
T ss_pred eccCCceEEEEecCCce-EEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecc----cccceeEEEEE
Confidence 45677 79999998666 44566678899999999999999999888888888998876543111 11234455667
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+|+...++.+ .+.+. ....|+++|+
T Consensus 452 ~~nsr~iAYa-fP~gy---~tq~Iklydm 476 (668)
T COG4946 452 HPNSRWIAYA-FPEGY---YTQSIKLYDM 476 (668)
T ss_pred cCCceeEEEe-cCcce---eeeeEEEEec
Confidence 7777766543 22222 2456888876
No 265
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=97.63 E-value=0.00018 Score=48.37 Aligned_cols=55 Identities=13% Similarity=0.066 Sum_probs=44.3
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
.+..||+|.+||...+.... ....-....++|+|+|..++.|++.|.+.+||+.-
T Consensus 276 lGC~DgSiiLyD~~~~~t~~--~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~AL 330 (545)
T PF11768_consen 276 LGCEDGSIILYDTTRGVTLL--AKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMAL 330 (545)
T ss_pred EEecCCeEEEEEcCCCeeee--eeecccceEEEEcCCCcEEEEEcCCceEEEEEeec
Confidence 46789999999998764332 22344567899999999999999999999999864
No 266
>KOG3914|consensus
Probab=97.60 E-value=0.00011 Score=47.11 Aligned_cols=60 Identities=15% Similarity=0.154 Sum_probs=42.4
Q ss_pred cccccCeeeecCCCCceeeeee-ecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCcee
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVL-TQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKV 62 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~-~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~ 62 (111)
++.-|++|++-.+...--+..| .||...|..++.-+ +++|+++|.|+++++||+.+++.+
T Consensus 168 taDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~-~~~LlS~sGD~tlr~Wd~~sgk~L 228 (390)
T KOG3914|consen 168 TADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTD-NYLLLSGSGDKTLRLWDITSGKLL 228 (390)
T ss_pred EecCCceEEEEecCcccchhhhccccHhheeeeeecc-CceeeecCCCCcEEEEecccCCcc
Confidence 3445666666554433333333 57999999998875 556889999999999999986544
No 267
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.58 E-value=0.0051 Score=39.89 Aligned_cols=96 Identities=13% Similarity=0.064 Sum_probs=63.4
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEE-e---------CCCeEEEEecCCCceeeeecc--e-eeeec
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATC-S---------KDGYILVWTSSYPSKVKYSHD--M-KTFSW 73 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~-~---------~d~~i~iw~~~~~~~~~~~~~--~-~~~~~ 73 (111)
++|.+.|..+.+.+.++..-... ..+ ++||++.|..+ + .+..|.+||..+.+....... - .....
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~P-~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~ 104 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFLP-NPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVG 104 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCCC-cee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhcc
Confidence 78999999988888877632211 224 89998765555 4 478999999998776652110 0 10011
Q ss_pred CceeeEEEccCCCEEEEeccccCCcccc-CceEEEeecC
Q psy8803 74 KYTQYSQFNESDTLLLVSGVHFGTPQST-SGEIAVFSLQ 111 (111)
Q Consensus 74 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~i~iw~~~ 111 (111)
......+++|++..++++. -. ++.|.+.|+.
T Consensus 105 ~~~~~~~ls~dgk~l~V~n-------~~p~~~V~VvD~~ 136 (352)
T TIGR02658 105 TYPWMTSLTPDNKTLLFYQ-------FSPSPAVGVVDLE 136 (352)
T ss_pred CccceEEECCCCCEEEEec-------CCCCCEEEEEECC
Confidence 2234678999999988765 23 6778888863
No 268
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=97.53 E-value=0.0062 Score=39.25 Aligned_cols=98 Identities=14% Similarity=0.186 Sum_probs=59.9
Q ss_pred cccCeeeecCCC--Cce--eeeeeec----c--cccEEEEEEcCCCcEEEEEe-CCCeEEEEecCC--Cceeeeecceee
Q psy8803 4 WYEEYKRLDYHT--PIV--ETEVLTQ----H--THQVLHVSFSHNGRYFATCS-KDGYILVWTSSY--PSKVKYSHDMKT 70 (111)
Q Consensus 4 ~~d~~i~iw~~~--~~~--~~~~~~~----~--~~~v~~i~~s~~~~~l~s~~-~d~~i~iw~~~~--~~~~~~~~~~~~ 70 (111)
..+++|.++++. .+. .+..... . ......|.++||+++|..+. ....|.+|++.. +.. .....+..
T Consensus 211 e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l-~~~~~~~~ 289 (345)
T PF10282_consen 211 ELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTL-TLVQTVPT 289 (345)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTE-EEEEEEEE
T ss_pred CCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCce-EEEEEEeC
Confidence 345667777776 332 2222211 1 12578899999998766654 566899999943 332 21112222
Q ss_pred eecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 71 FSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 71 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.....+.++++|++..++++. ..++.|.+|++
T Consensus 290 -~G~~Pr~~~~s~~g~~l~Va~-------~~s~~v~vf~~ 321 (345)
T PF10282_consen 290 -GGKFPRHFAFSPDGRYLYVAN-------QDSNTVSVFDI 321 (345)
T ss_dssp -SSSSEEEEEE-TTSSEEEEEE-------TTTTEEEEEEE
T ss_pred -CCCCccEEEEeCCCCEEEEEe-------cCCCeEEEEEE
Confidence 123467899999999999988 77788998865
No 269
>KOG1409|consensus
Probab=97.53 E-value=0.00024 Score=45.21 Aligned_cols=56 Identities=20% Similarity=0.275 Sum_probs=46.1
Q ss_pred ccccCeeeecCCCCce-eeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 3 SWYEEYKRLDYHTPIV-ETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~-~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
...|..+-+||+--.+ ....+.+|.+.|..+...+..+.+.++++|+.|-+|+++.
T Consensus 215 g~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~ 271 (404)
T KOG1409|consen 215 GASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNV 271 (404)
T ss_pred ccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccc
Confidence 3467889999996432 3456678999999999888888999999999999999874
No 270
>KOG4190|consensus
Probab=97.52 E-value=6.4e-05 Score=50.72 Aligned_cols=40 Identities=20% Similarity=0.304 Sum_probs=34.1
Q ss_pred eeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 19 ETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 19 ~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
.+..+.||+..|..+.--.+.+-+++++.|+++++|.++.
T Consensus 727 rL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~ 766 (1034)
T KOG4190|consen 727 RLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKP 766 (1034)
T ss_pred eeecccCcHHHhHHHHhcccccceeeccCCceEEEEEecc
Confidence 3557789999999887766778899999999999999975
No 271
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.49 E-value=0.00081 Score=30.64 Aligned_cols=31 Identities=23% Similarity=0.314 Sum_probs=28.2
Q ss_pred cccEEEEEEcCCCcEEEEEeCCCeEEEEecC
Q psy8803 27 THQVLHVSFSHNGRYFATCSKDGYILVWTSS 57 (111)
Q Consensus 27 ~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~ 57 (111)
...|.+++|+|...+||.+..+|.+.++.+.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 4568999999999999999999999999884
No 272
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=97.48 E-value=0.0037 Score=40.93 Aligned_cols=80 Identities=13% Similarity=0.049 Sum_probs=49.1
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEE-EEeCCC--eEEEEecCCCceeeeecceeeeecCceeeEEEcc
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFA-TCSKDG--YILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~-s~~~d~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
..|.+||+.+++... +..+.+.+..+.|+||++.|+ +.+.++ .|.+|++.+...... .... ......+|+|
T Consensus 214 ~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l----~~~~-~~~~~~~~s~ 287 (417)
T TIGR02800 214 PEIYVQDLATGQREK-VASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTRL----TNGP-GIDTEPSWSP 287 (417)
T ss_pred cEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCEEEC----CCCC-CCCCCEEECC
Confidence 468899988775432 333555667789999998665 444443 588888876543321 1000 1122457888
Q ss_pred CCCEEEEec
Q psy8803 84 SDTLLLVSG 92 (111)
Q Consensus 84 ~~~~~~~~~ 92 (111)
++..++.+.
T Consensus 288 dg~~l~~~s 296 (417)
T TIGR02800 288 DGKSIAFTS 296 (417)
T ss_pred CCCEEEEEE
Confidence 888876654
No 273
>PRK01029 tolB translocation protein TolB; Provisional
Probab=97.42 E-value=0.0029 Score=42.02 Aligned_cols=81 Identities=19% Similarity=0.216 Sum_probs=49.8
Q ss_pred eeeeecccccEEEEEEcCCCcEEEEEeCC---CeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccC
Q psy8803 20 TEVLTQHTHQVLHVSFSHNGRYFATCSKD---GYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFG 96 (111)
Q Consensus 20 ~~~~~~~~~~v~~i~~s~~~~~l~s~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 96 (111)
...+..+...+....|+|||+.|+..+.+ ..|.+||+.++......... .......|+|++..++.+...
T Consensus 319 ~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~~-----~~~~~p~wSpDG~~L~f~~~~-- 391 (428)
T PRK01029 319 PRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTSP-----ENKESPSWAIDSLHLVYSAGN-- 391 (428)
T ss_pred eEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCCC-----CCccceEECCCCCEEEEEECC--
Confidence 34444444566788999999988766432 46889999876544321110 122346788999888766521
Q ss_pred CccccCceEEEeec
Q psy8803 97 TPQSTSGEIAVFSL 110 (111)
Q Consensus 97 ~~~~~~~~i~iw~~ 110 (111)
.....|.++|+
T Consensus 392 ---~g~~~L~~vdl 402 (428)
T PRK01029 392 ---SNESELYLISL 402 (428)
T ss_pred ---CCCceEEEEEC
Confidence 12345777765
No 274
>KOG0309|consensus
Probab=97.42 E-value=0.00018 Score=50.07 Aligned_cols=100 Identities=13% Similarity=0.062 Sum_probs=67.8
Q ss_pred CcccccCeeeecCCCCc-eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 1 KKSWYEEYKRLDYHTPI-VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~-~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
|+-+-|-.+..||.++- .++..+..-......++|+-..-.+...+...-+.+||.+.+....+..+- ....++.+
T Consensus 131 atcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~---~vs~vn~~ 207 (1081)
T KOG0309|consen 131 ATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKG---HVSSVNSI 207 (1081)
T ss_pred eeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEEeccCCCcceEEecc---cceeeehH
Confidence 45677889999999854 566666655667789999875444444444567999999876544432111 12445567
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+|+.-....+.+. +.|++|++||.
T Consensus 208 ~fnr~~~s~~~s~-------~~d~tvkfw~y 231 (1081)
T KOG0309|consen 208 DFNRFKYSEIMSS-------SNDGTVKFWDY 231 (1081)
T ss_pred HHhhhhhhhhccc-------CCCCceeeecc
Confidence 7777655555665 78999999986
No 275
>PRK00178 tolB translocation protein TolB; Provisional
Probab=97.38 E-value=0.0046 Score=40.86 Aligned_cols=79 Identities=14% Similarity=0.082 Sum_probs=47.1
Q ss_pred eeeecCCCCceeeeeeecccccEEEEEEcCCCcEEE-EEeCCC--eEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 8 YKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFA-TCSKDG--YILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~-s~~~d~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
.|.+|++.+++... +....+.+....|+|||+.|+ +...++ .|.++|+.++........ . .......|+|+
T Consensus 224 ~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~-~----~~~~~~~~spD 297 (430)
T PRK00178 224 RIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLSRVTNH-P----AIDTEPFWGKD 297 (430)
T ss_pred EEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeEEcccC-C----CCcCCeEECCC
Confidence 56777877664332 332334455789999998776 444444 578888887654321110 0 11224578899
Q ss_pred CCEEEEec
Q psy8803 85 DTLLLVSG 92 (111)
Q Consensus 85 ~~~~~~~~ 92 (111)
+..++.+.
T Consensus 298 g~~i~f~s 305 (430)
T PRK00178 298 GRTLYFTS 305 (430)
T ss_pred CCEEEEEE
Confidence 88877665
No 276
>PRK04792 tolB translocation protein TolB; Provisional
Probab=97.38 E-value=0.005 Score=41.11 Aligned_cols=79 Identities=16% Similarity=0.124 Sum_probs=46.1
Q ss_pred eeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEE-EeCCCe--EEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 8 YKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFAT-CSKDGY--ILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s-~~~d~~--i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
.|.++|+.+++... +....+......|+|||+.|+. ...++. |.++|+.++........ .......+|+|+
T Consensus 243 ~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~lt~~-----~~~~~~p~wSpD 316 (448)
T PRK04792 243 EIFVQDIYTQVREK-VTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALTRITRH-----RAIDTEPSWHPD 316 (448)
T ss_pred EEEEEECCCCCeEE-ecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeEECccC-----CCCccceEECCC
Confidence 46777777665322 2222233446799999987764 455664 77777776543321110 012234678999
Q ss_pred CCEEEEec
Q psy8803 85 DTLLLVSG 92 (111)
Q Consensus 85 ~~~~~~~~ 92 (111)
+..++.+.
T Consensus 317 G~~I~f~s 324 (448)
T PRK04792 317 GKSLIFTS 324 (448)
T ss_pred CCEEEEEE
Confidence 98887765
No 277
>KOG4497|consensus
Probab=97.34 E-value=0.0007 Score=43.11 Aligned_cols=94 Identities=11% Similarity=0.102 Sum_probs=62.5
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEE-eCCCeEEEEecCCCceeeeecceeeeecCceeeEEEcc
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATC-SKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
.+..+-|-|.++-+..+-+. .-..|.-+.|..|..+++++ ..++.+.+|++...+-... +-+.. .+...++|+|
T Consensus 27 ~~yrlviRd~~tlq~~qlf~-cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ck---Ideg~-agls~~~WSP 101 (447)
T KOG4497|consen 27 SRYRLVIRDSETLQLHQLFL-CLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCK---IDEGQ-AGLSSISWSP 101 (447)
T ss_pred eeeEEEEeccchhhHHHHHH-HHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEE---eccCC-CcceeeeECC
Confidence 34455566655444332222 24577888999998776665 5677999999976543321 21111 3455778999
Q ss_pred CCCEEEEeccccCCccccCceEEEeec
Q psy8803 84 SDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
++.+++.+. ..+-.|.+|.+
T Consensus 102 dgrhiL~ts-------eF~lriTVWSL 121 (447)
T KOG4497|consen 102 DGRHILLTS-------EFDLRITVWSL 121 (447)
T ss_pred CcceEeeee-------cceeEEEEEEe
Confidence 999998887 78888999976
No 278
>PRK01029 tolB translocation protein TolB; Provisional
Probab=97.31 E-value=0.0054 Score=40.77 Aligned_cols=96 Identities=14% Similarity=0.124 Sum_probs=49.6
Q ss_pred cCeeeecCCCCc---eeeeeeecccccEEEEEEcCCCcEEEEEe-CCCeEEEEec--CC-CceeeeecceeeeecCceee
Q psy8803 6 EEYKRLDYHTPI---VETEVLTQHTHQVLHVSFSHNGRYFATCS-KDGYILVWTS--SY-PSKVKYSHDMKTFSWKYTQY 78 (111)
Q Consensus 6 d~~i~iw~~~~~---~~~~~~~~~~~~v~~i~~s~~~~~l~s~~-~d~~i~iw~~--~~-~~~~~~~~~~~~~~~~~~~~ 78 (111)
|..+.+|++..+ +.........+......|+|||+.|+..+ .++...+|.+ .. ..... .+... ......
T Consensus 256 di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~---~lt~~-~~~~~~ 331 (428)
T PRK01029 256 DLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPR---LLTKK-YRNSSC 331 (428)
T ss_pred ceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceE---EeccC-CCCccc
Confidence 344555666542 22222222223445679999999777654 4565555543 22 11111 01100 012335
Q ss_pred EEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 79 SQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.+|+|++..++.+.... ....|.+||+
T Consensus 332 p~wSPDG~~Laf~~~~~-----g~~~I~v~dl 358 (428)
T PRK01029 332 PAWSPDGKKIAFCSVIK-----GVRQICVYDL 358 (428)
T ss_pred eeECCCCCEEEEEEcCC-----CCcEEEEEEC
Confidence 67899999887765221 1345888875
No 279
>KOG1354|consensus
Probab=97.29 E-value=0.00091 Score=42.79 Aligned_cols=99 Identities=18% Similarity=0.210 Sum_probs=59.1
Q ss_pred ccccCeeeecCCCCcee----------------eeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCC-cee---
Q psy8803 3 SWYEEYKRLDYHTPIVE----------------TEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYP-SKV--- 62 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~----------------~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~-~~~--- 62 (111)
|+.-|+|++-|.++..+ ...|.+--+.|..+.|++.|+++++...- ++++||+.-. .+.
T Consensus 232 SSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDyl-tvk~wD~nme~~pv~t~ 310 (433)
T KOG1354|consen 232 SSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDYL-TVKLWDLNMEAKPVETY 310 (433)
T ss_pred ecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEeccc-eeEEEeccccCCcceEE
Confidence 67789999999984311 11112223578899999999999998764 8999998531 111
Q ss_pred e-eec---ceeeeec----CceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 63 K-YSH---DMKTFSW----KYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 63 ~-~~~---~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
. |.. +...+.- .--.-++|+-++.++ .+| +..+.++++++
T Consensus 311 ~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v-~TG-------sy~n~frvf~~ 358 (433)
T KOG1354|consen 311 PVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYV-MTG-------SYNNVFRVFNL 358 (433)
T ss_pred eehHhHHHHHHHHhhccchhheeEEEEcCCcceE-ecc-------cccceEEEecC
Confidence 1 110 0000000 011235666666665 556 77888888873
No 280
>KOG4532|consensus
Probab=97.17 E-value=0.0072 Score=37.70 Aligned_cols=78 Identities=17% Similarity=0.163 Sum_probs=48.0
Q ss_pred ccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCcee-eeecceeeeecCceeeEEEccCCC--EEEEeccccCCccccC
Q psy8803 26 HTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKV-KYSHDMKTFSWKYTQYSQFNESDT--LLLVSGVHFGTPQSTS 102 (111)
Q Consensus 26 ~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~ 102 (111)
.+..-.+..|+.....+|.+.+|+++.|||++..... ....+-+...-+.+..+.|++.+. .++.+ -.-
T Consensus 202 t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~s--------Ehf 273 (344)
T KOG4532|consen 202 TSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFIS--------EHF 273 (344)
T ss_pred cCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEe--------cCc
Confidence 3455678899999999999999999999999874332 211111111223455666776332 33332 234
Q ss_pred ceEEEeecC
Q psy8803 103 GEIAVFSLQ 111 (111)
Q Consensus 103 ~~i~iw~~~ 111 (111)
+.+++.|+|
T Consensus 274 s~~hv~D~R 282 (344)
T KOG4532|consen 274 SRVHVVDTR 282 (344)
T ss_pred ceEEEEEcc
Confidence 556776664
No 281
>KOG1334|consensus
Probab=97.10 E-value=0.00015 Score=47.89 Aligned_cols=57 Identities=11% Similarity=-0.063 Sum_probs=51.6
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
+++..|+|-||+-.+++.+..+++-...|.|+.-+|---.||+++-|.-|+||-...
T Consensus 411 SGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~ 467 (559)
T KOG1334|consen 411 SGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLT 467 (559)
T ss_pred ecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccceeeecCCc
Confidence 567889999999999999998998878999999999999999999999999998743
No 282
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=97.07 E-value=0.026 Score=34.50 Aligned_cols=91 Identities=15% Similarity=0.088 Sum_probs=54.9
Q ss_pred CeeeecCCCCceeeeeeec-----ccccEEEEEEcCCCcEEEEEeCC--------CeEEEEecCCCceeeeecceeeeec
Q psy8803 7 EYKRLDYHTPIVETEVLTQ-----HTHQVLHVSFSHNGRYFATCSKD--------GYILVWTSSYPSKVKYSHDMKTFSW 73 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~-----~~~~v~~i~~s~~~~~l~s~~~d--------~~i~iw~~~~~~~~~~~~~~~~~~~ 73 (111)
+.+.++|..+++....... .......++++++|+++++.... +.+..++.. ...... .. ..
T Consensus 60 ~~~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~---~~--~~ 133 (246)
T PF08450_consen 60 GGIAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVV---AD--GL 133 (246)
T ss_dssp TCEEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEE---EE--EE
T ss_pred CceEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEE---ec--Cc
Confidence 3445557777643333322 34567889999999988886543 345556555 332221 11 12
Q ss_pred CceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 74 KYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 74 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
...+.++|+|++..++++- +..+.|..+++
T Consensus 134 ~~pNGi~~s~dg~~lyv~d-------s~~~~i~~~~~ 163 (246)
T PF08450_consen 134 GFPNGIAFSPDGKTLYVAD-------SFNGRIWRFDL 163 (246)
T ss_dssp SSEEEEEEETTSSEEEEEE-------TTTTEEEEEEE
T ss_pred ccccceEECCcchheeecc-------cccceeEEEec
Confidence 4568899999999887765 56666776664
No 283
>KOG4640|consensus
Probab=97.03 E-value=0.0036 Score=42.90 Aligned_cols=41 Identities=17% Similarity=0.255 Sum_probs=33.3
Q ss_pred eecccccEE-EEEEcCCCcEEEEEeCCCeEEEEecCCCceee
Q psy8803 23 LTQHTHQVL-HVSFSHNGRYFATCSKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 23 ~~~~~~~v~-~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~ 63 (111)
+.-|...+. +++|.|||++|+.|-.||+|++-|++.+....
T Consensus 57 ip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~ 98 (665)
T KOG4640|consen 57 IPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLV 98 (665)
T ss_pred ccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCcee
Confidence 333555566 99999999999999999999999998765443
No 284
>KOG1275|consensus
Probab=97.02 E-value=0.0017 Score=46.25 Aligned_cols=56 Identities=13% Similarity=0.172 Sum_probs=46.4
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeC---------CCeEEEEecCCCc
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSK---------DGYILVWTSSYPS 60 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~---------d~~i~iw~~~~~~ 60 (111)
+...|+|-+-|.++.+.++++..|++.|..+.. .|++|+++|. |..++|||++.-+
T Consensus 193 G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmr 257 (1118)
T KOG1275|consen 193 GDTRGTVFLRDPNSFETIHTFDAHSGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMR 257 (1118)
T ss_pred ecccceEEeecCCcCceeeeeeccccceeeeec--cCCeEEEeecccccccccccchhhhhhhhhhh
Confidence 445789999999999999999999999988755 6999999875 4567899988643
No 285
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=96.97 E-value=0.003 Score=40.13 Aligned_cols=77 Identities=18% Similarity=0.330 Sum_probs=49.2
Q ss_pred ccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCC-ceee--e--ecceeeeecCceeeEEEccCCCEEEEeccccCCccc
Q psy8803 26 HTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYP-SKVK--Y--SHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQS 100 (111)
Q Consensus 26 ~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~-~~~~--~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 100 (111)
|...+..+.|..|...++++. |-+|.+|+++-. ..+. . ...+..+. .-+++..|+|....++.-. +
T Consensus 171 H~yhiNSiS~NsD~et~lSaD-dLrINLWnl~i~D~sFnIVDiKP~nmeeLt-eVItSaeFhp~~cn~fmYS-------s 241 (460)
T COG5170 171 HPYHINSISFNSDKETLLSAD-DLRINLWNLEIIDGSFNIVDIKPHNMEELT-EVITSAEFHPEMCNVFMYS-------S 241 (460)
T ss_pred ceeEeeeeeecCchheeeecc-ceeeeeccccccCCceEEEeccCccHHHHH-HHHhhcccCHhHcceEEEe-------c
Confidence 666788899999998888876 678999998742 1111 0 00111111 1245667899666554433 6
Q ss_pred cCceEEEeecC
Q psy8803 101 TSGEIAVFSLQ 111 (111)
Q Consensus 101 ~~~~i~iw~~~ 111 (111)
..|+|++-|||
T Consensus 242 SkG~Ikl~DlR 252 (460)
T COG5170 242 SKGEIKLNDLR 252 (460)
T ss_pred CCCcEEehhhh
Confidence 78899999886
No 286
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=96.88 E-value=0.0056 Score=38.14 Aligned_cols=37 Identities=16% Similarity=0.296 Sum_probs=32.7
Q ss_pred ccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCcee
Q psy8803 26 HTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKV 62 (111)
Q Consensus 26 ~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~ 62 (111)
-...|..|..||||+.|++..-+|.|.+|++.+....
T Consensus 228 ~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~ 264 (282)
T PF15492_consen 228 EQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQ 264 (282)
T ss_pred CCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhh
Confidence 4678999999999999999999999999999875443
No 287
>KOG1275|consensus
Probab=96.85 E-value=0.012 Score=42.21 Aligned_cols=89 Identities=16% Similarity=0.161 Sum_probs=59.8
Q ss_pred ecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee----eecceeeeecCceeeEEEccCCC
Q psy8803 11 LDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK----YSHDMKTFSWKYTQYSQFNESDT 86 (111)
Q Consensus 11 iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~ 86 (111)
..|++..+......-..+.|.-| ..+++.+.+|...|++.+-|.++.+..+ |+..+ .+|.-.++
T Consensus 161 ~~Dl~~~~e~r~~~v~a~~v~im--R~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~si----------SDfDv~GN 228 (1118)
T KOG1275|consen 161 HIDLNTEKETRTTNVSASGVTIM--RYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSI----------SDFDVQGN 228 (1118)
T ss_pred eeecccceeeeeeeccCCceEEE--EecCcEEEeecccceEEeecCCcCceeeeeeccccce----------eeeeccCC
Confidence 34566555444333223334444 3468999999999999999999876665 33333 35666899
Q ss_pred EEEEeccccCC-ccccCceEEEeecC
Q psy8803 87 LLLVSGVHFGT-PQSTSGEIAVFSLQ 111 (111)
Q Consensus 87 ~~~~~~~~~~~-~~~~~~~i~iw~~~ 111 (111)
.++++|...+. --..|..|+|||+|
T Consensus 229 lLitCG~S~R~~~l~~D~FvkVYDLR 254 (1118)
T KOG1275|consen 229 LLITCGYSMRRYNLAMDPFVKVYDLR 254 (1118)
T ss_pred eEEEeecccccccccccchhhhhhhh
Confidence 99998877554 22458889999986
No 288
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=96.84 E-value=0.0045 Score=39.37 Aligned_cols=100 Identities=12% Similarity=0.054 Sum_probs=62.9
Q ss_pred ccccCeeeecCCCCc---eeeeeeecc-----cccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCce-------ee-ee
Q psy8803 3 SWYEEYKRLDYHTPI---VETEVLTQH-----THQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSK-------VK-YS 65 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~---~~~~~~~~~-----~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~-------~~-~~ 65 (111)
|..|-.|.+|++.-- -.+..++.| +..|....|+|. ...+.-.+..|.|++-|++.... .. ..
T Consensus 189 SaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klfe~~~ 268 (460)
T COG5170 189 SADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLFELTI 268 (460)
T ss_pred eccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhhhhcc
Confidence 456777888988532 234444444 346778889996 56677777889999999984211 11 00
Q ss_pred ccee----eeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 66 HDMK----TFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 66 ~~~~----~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
..+. .-..+.+..+.|++.+.+++. -.=.+++|||++
T Consensus 269 D~v~~~ff~eivsSISD~kFs~ngryIls---------RdyltvkiwDvn 309 (460)
T COG5170 269 DGVDVDFFEEIVSSISDFKFSDNGRYILS---------RDYLTVKIWDVN 309 (460)
T ss_pred CcccchhHHHHhhhhcceEEcCCCcEEEE---------eccceEEEEecc
Confidence 0110 001123457899999988876 335669999975
No 289
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=96.81 E-value=0.029 Score=41.55 Aligned_cols=74 Identities=18% Similarity=0.177 Sum_probs=51.2
Q ss_pred EEEEEcC-CCcEEEEEeCCCeEEEEecCCCceeeeecc----------eeeeecCceeeEEEccCCCEEEEeccccCCcc
Q psy8803 31 LHVSFSH-NGRYFATCSKDGYILVWTSSYPSKVKYSHD----------MKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQ 99 (111)
Q Consensus 31 ~~i~~s~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~----------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 99 (111)
..++++| ++.++++...++.|.+||..++........ ...........++++|++..++++.
T Consensus 686 ~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVAD------- 758 (1057)
T PLN02919 686 WDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIAD------- 758 (1057)
T ss_pred eEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEE-------
Confidence 5789999 577888888889999999877543221100 0011123456799999988777776
Q ss_pred ccCceEEEeecC
Q psy8803 100 STSGEIAVFSLQ 111 (111)
Q Consensus 100 ~~~~~i~iw~~~ 111 (111)
..++.|++||++
T Consensus 759 s~n~~Irv~D~~ 770 (1057)
T PLN02919 759 SESSSIRALDLK 770 (1057)
T ss_pred CCCCeEEEEECC
Confidence 677889999863
No 290
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=96.75 E-value=0.068 Score=34.49 Aligned_cols=72 Identities=13% Similarity=0.187 Sum_probs=50.1
Q ss_pred EEEEEEcCCCcEEEEEeC-CCeEEEEecCCCceeeee-cceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEE
Q psy8803 30 VLHVSFSHNGRYFATCSK-DGYILVWTSSYPSKVKYS-HDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAV 107 (111)
Q Consensus 30 v~~i~~s~~~~~l~s~~~-d~~i~iw~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~i 107 (111)
+-...+.|+++++++... -.+|.+|++..+...... ..+.. -...+.++|+|++....+.. --+++|.+
T Consensus 147 ~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~--G~GPRHi~FHpn~k~aY~v~-------EL~stV~v 217 (346)
T COG2706 147 VHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKP--GAGPRHIVFHPNGKYAYLVN-------ELNSTVDV 217 (346)
T ss_pred cceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCC--CCCcceEEEcCCCcEEEEEe-------ccCCEEEE
Confidence 778889999999888753 237899999876544321 12211 13467899999998776655 55777888
Q ss_pred eec
Q psy8803 108 FSL 110 (111)
Q Consensus 108 w~~ 110 (111)
|..
T Consensus 218 ~~y 220 (346)
T COG2706 218 LEY 220 (346)
T ss_pred EEE
Confidence 864
No 291
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=96.74 E-value=0.072 Score=34.43 Aligned_cols=99 Identities=10% Similarity=0.099 Sum_probs=61.3
Q ss_pred ccCeeeecCCCCc--e--eeeeeecccccEEEEEEcCCCcEEEEEe-CCCeEEEEecCCC-ceeeeeccee----e----
Q psy8803 5 YEEYKRLDYHTPI--V--ETEVLTQHTHQVLHVSFSHNGRYFATCS-KDGYILVWTSSYP-SKVKYSHDMK----T---- 70 (111)
Q Consensus 5 ~d~~i~iw~~~~~--~--~~~~~~~~~~~v~~i~~s~~~~~l~s~~-~d~~i~iw~~~~~-~~~~~~~~~~----~---- 70 (111)
.++.|..|.+... + .+............++++|++++|+.+. .++.+.++++... ........+. .
T Consensus 60 ~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~ 139 (345)
T PF10282_consen 60 DSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPD 139 (345)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTT
T ss_pred CCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCccc
Confidence 4677777777653 2 3333332334556789999999888886 4789999999763 2222110010 0
Q ss_pred -eecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 71 -FSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 71 -~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
-.......+.|+|++..++++. -....|.++++
T Consensus 140 rq~~~h~H~v~~~pdg~~v~v~d-------lG~D~v~~~~~ 173 (345)
T PF10282_consen 140 RQEGPHPHQVVFSPDGRFVYVPD-------LGADRVYVYDI 173 (345)
T ss_dssp TTSSTCEEEEEE-TTSSEEEEEE-------TTTTEEEEEEE
T ss_pred ccccccceeEEECCCCCEEEEEe-------cCCCEEEEEEE
Confidence 0112345789999999988875 34556888875
No 292
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=96.73 E-value=0.045 Score=36.99 Aligned_cols=95 Identities=13% Similarity=0.069 Sum_probs=59.7
Q ss_pred cCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeC---CCeEEEEecCCCceeeeecceeeeecCceeeEEEc
Q psy8803 6 EEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSK---DGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFN 82 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 82 (111)
+..+.++|++.+ .... .....=..+.|+|.+++++.++= .|.+-+|+..+...+. ....-...+.+.|+
T Consensus 297 pa~~s~~~lr~N-l~~~--~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~-----~~~~~~n~s~~~ws 368 (561)
T COG5354 297 PASVSVFDLRGN-LRFY--FPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVA-----GAFNGLNTSYCDWS 368 (561)
T ss_pred ccceeecccccc-eEEe--cCCcccccccccCcccEEEEecCCccccceEEeccCCceEEE-----EEeecCCceEeecc
Confidence 334556666633 2222 23334467789999999888653 4678899887654332 11111233456789
Q ss_pred cCCCEEEEeccccCCccccCceEEEeec
Q psy8803 83 ESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
|++..+.+..+.... -.|+.|.|||+
T Consensus 369 pd~qF~~~~~ts~k~--~~Dn~i~l~~v 394 (561)
T COG5354 369 PDGQFYDTDTTSEKL--RVDNSIKLWDV 394 (561)
T ss_pred CCceEEEecCCCccc--ccCcceEEEEe
Confidence 999888776655554 56889999996
No 293
>KOG2314|consensus
Probab=96.72 E-value=0.008 Score=40.91 Aligned_cols=51 Identities=12% Similarity=0.105 Sum_probs=39.0
Q ss_pred CeeeecCCCCceeeeeeec--ccccE-EEEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 7 EYKRLDYHTPIVETEVLTQ--HTHQV-LHVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~--~~~~v-~~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
.++.|||+.+|.....|.. ....+ .-..||.|+.++|....+ .|.|++...
T Consensus 282 ~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~-sisIyEtps 335 (698)
T KOG2314|consen 282 QQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGN-SISIYETPS 335 (698)
T ss_pred ceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEeccc-eEEEEecCc
Confidence 5699999999988777754 22223 346799999999998875 788998765
No 294
>KOG1832|consensus
Probab=96.64 E-value=0.0033 Score=45.14 Aligned_cols=69 Identities=16% Similarity=0.106 Sum_probs=52.0
Q ss_pred eeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEec
Q psy8803 20 TEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 20 ~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 92 (111)
...|..|+....|++|+-+.++|+.|+..|.|+++++.++.-..+ ++|+. ++++.+.-+.++..++.+.
T Consensus 1094 w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s---~ncH~-SavT~vePs~dgs~~Ltss 1162 (1516)
T KOG1832|consen 1094 WRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEES---VNCHQ-SAVTLVEPSVDGSTQLTSS 1162 (1516)
T ss_pred chhhhccccceeeEEeecCCceEEeeeccceEEEEEccCcccccc---ccccc-cccccccccCCcceeeeec
Confidence 445556788899999999999999999999999999998765542 34433 4555566666777776665
No 295
>KOG1645|consensus
Probab=96.61 E-value=0.01 Score=38.82 Aligned_cols=55 Identities=9% Similarity=0.101 Sum_probs=46.9
Q ss_pred cccCeeeecCCCCceeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCC
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYP 59 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~ 59 (111)
+-+.+|+|.|+++...+..+..+ ..++.++|+.| .+.|..|..+|-+.+||++..
T Consensus 213 sl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~ 268 (463)
T KOG1645|consen 213 SLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQP 268 (463)
T ss_pred ccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCC
Confidence 45678999999998888888877 78999999997 567888889999999999864
No 296
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.60 E-value=0.016 Score=25.85 Aligned_cols=31 Identities=19% Similarity=0.246 Sum_probs=26.2
Q ss_pred ccEEEEEEcCC-C--cEEEEEeCCCeEEEEecCC
Q psy8803 28 HQVLHVSFSHN-G--RYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 28 ~~v~~i~~s~~-~--~~l~s~~~d~~i~iw~~~~ 58 (111)
+.+.++.|+|+ + .+|+-+-..+.+.++|++.
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 46889999985 4 6888888889999999995
No 297
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=96.58 E-value=0.086 Score=35.68 Aligned_cols=93 Identities=10% Similarity=0.034 Sum_probs=60.5
Q ss_pred cCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCC----eEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 6 EEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDG----YILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
..-+.+.|+.++....-=+...+.|....|+|++++||-+-.++ .|+++|+..++......+ ....+ +=+|
T Consensus 422 r~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~-ta~Df----sPaF 496 (668)
T COG4946 422 RFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTP-TAYDF----SPAF 496 (668)
T ss_pred ceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCC-ccccc----Cccc
Confidence 34466677777765443344567899999999999999987765 589999998776542211 12222 2367
Q ss_pred ccCCCEEEEeccccCCccccCce
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGE 104 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~ 104 (111)
.|++.++.........+ +.|..
T Consensus 497 D~d~ryLYfLs~RsLdP-s~Drv 518 (668)
T COG4946 497 DPDGRYLYFLSARSLDP-SNDRV 518 (668)
T ss_pred CCCCcEEEEEeccccCC-CCCee
Confidence 88888776655554443 34443
No 298
>KOG2079|consensus
Probab=96.57 E-value=0.0084 Score=43.63 Aligned_cols=61 Identities=18% Similarity=0.135 Sum_probs=44.3
Q ss_pred ccccCeeeecCCCCc-eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee
Q psy8803 3 SWYEEYKRLDYHTPI-VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~-~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~ 63 (111)
++.-|++...|.+.+ .+.+.-+.-++.|.+++|+.+|..++.|-.+|-|.+||+......+
T Consensus 105 ~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~ 166 (1206)
T KOG2079|consen 105 GTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILK 166 (1206)
T ss_pred EcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCccee
Confidence 445566666666643 1122223346899999999999999999999999999998755443
No 299
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=96.46 E-value=0.035 Score=35.94 Aligned_cols=86 Identities=8% Similarity=0.076 Sum_probs=53.7
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee--eec--ce-eeee-------
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK--YSH--DM-KTFS------- 72 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~--~~~--~~-~~~~------- 72 (111)
..+...++|+.+++...-.. ....+....|||+|+.++-.. +..|.+.+.......+ ..+ .+ +...
T Consensus 21 ~~~~y~i~d~~~~~~~~l~~-~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEE 98 (353)
T PF00930_consen 21 FKGDYYIYDIETGEITPLTP-PPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEE 98 (353)
T ss_dssp EEEEEEEEETTTTEEEESS--EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHH
T ss_pred cceeEEEEecCCCceEECcC-CccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceecccc
Confidence 34667888998765443322 366788999999999998886 5689999887654333 111 00 0000
Q ss_pred -cCceeeEEEccCCCEEEEec
Q psy8803 73 -WKYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 73 -~~~~~~v~~~~~~~~~~~~~ 92 (111)
+.....+-|+|++.+|+..-
T Consensus 99 v~~~~~~~~WSpd~~~la~~~ 119 (353)
T PF00930_consen 99 VFDRRSAVWWSPDSKYLAFLR 119 (353)
T ss_dssp TSSSSBSEEE-TTSSEEEEEE
T ss_pred ccccccceEECCCCCEEEEEE
Confidence 12235678999999988876
No 300
>KOG2314|consensus
Probab=96.46 E-value=0.017 Score=39.39 Aligned_cols=74 Identities=18% Similarity=0.359 Sum_probs=47.1
Q ss_pred EEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCC---ccccCceEEE
Q psy8803 31 LHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGT---PQSTSGEIAV 107 (111)
Q Consensus 31 ~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~~~~~~i~i 107 (111)
.-+.|||.|.+|++-...| |.+|.=++....+ ......++.+.|+|...+|++-+...-. .......+.|
T Consensus 214 tyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~------RF~Hp~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~I 286 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQ------RFYHPGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLII 286 (698)
T ss_pred eeEEecCCceEEEEEeccc-eeeecCccHHHHH------hccCCCceeeecCCccceEEEecCCccccCcccCCCceEEE
Confidence 4678999999999988654 6788544322111 1111456778899999888664433111 0134578999
Q ss_pred eecC
Q psy8803 108 FSLQ 111 (111)
Q Consensus 108 w~~~ 111 (111)
||++
T Consensus 287 WDI~ 290 (698)
T KOG2314|consen 287 WDIA 290 (698)
T ss_pred EEcc
Confidence 9985
No 301
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=96.29 E-value=0.01 Score=23.98 Aligned_cols=27 Identities=22% Similarity=0.340 Sum_probs=19.4
Q ss_pred ceeeEEEccCCCEEEEeccccCCccccCceEEEee
Q psy8803 75 YTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
.+.++.|.+....+ +++ +.++.+++|+
T Consensus 14 ~i~~~~~~~~~~~~-~~~-------~~d~~~~~~~ 40 (40)
T smart00320 14 PVTSVAFSPDGKYL-ASA-------SDDGTIKLWD 40 (40)
T ss_pred ceeEEEECCCCCEE-EEe-------cCCCeEEEcC
Confidence 45567777777554 555 7799999996
No 302
>KOG1832|consensus
Probab=96.25 E-value=0.0042 Score=44.66 Aligned_cols=57 Identities=18% Similarity=0.066 Sum_probs=46.7
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCC--eEEEEecCC
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDG--YILVWTSSY 58 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~--~i~iw~~~~ 58 (111)
+++..|-|+++++.+|........|++.|..+.-+-||.++++.+... -..+|++..
T Consensus 1118 vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s 1176 (1516)
T KOG1832|consen 1118 VGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASS 1176 (1516)
T ss_pred eeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhcccc
Confidence 567789999999999988888889999999999888998877765433 356888764
No 303
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.21 E-value=0.023 Score=25.30 Aligned_cols=29 Identities=14% Similarity=0.266 Sum_probs=19.9
Q ss_pred eeeEEEccCCC--EEEEeccccCCccccCceEEEeecC
Q psy8803 76 TQYSQFNESDT--LLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 76 ~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+..++|+|+.. -+++.. -..+.|+|+|+|
T Consensus 3 vR~~kFsP~~~~~DLL~~~-------E~~g~vhi~D~R 33 (43)
T PF10313_consen 3 VRCCKFSPEPGGNDLLAWA-------EHQGRVHIVDTR 33 (43)
T ss_pred eEEEEeCCCCCcccEEEEE-------ccCCeEEEEEcc
Confidence 45788997555 444544 456679999986
No 304
>KOG1912|consensus
Probab=96.14 E-value=0.051 Score=38.79 Aligned_cols=62 Identities=8% Similarity=0.074 Sum_probs=49.7
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcC---CC-cEEEEEeCCCeEEEEecCCCcee
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSH---NG-RYFATCSKDGYILVWTSSYPSKV 62 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~---~~-~~l~s~~~d~~i~iw~~~~~~~~ 62 (111)
|++.-.|.|-+||...+..+..+..|.+.+..++|-+ +. ..|+.-....++-+|+..++..+
T Consensus 83 AsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~ 148 (1062)
T KOG1912|consen 83 ASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKF 148 (1062)
T ss_pred EeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCcee
Confidence 4556679999999999988889999999999999977 34 45555566679999999887654
No 305
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=96.02 E-value=0.19 Score=35.35 Aligned_cols=88 Identities=13% Similarity=0.067 Sum_probs=54.8
Q ss_pred ccCeeeecCCCCceeeeeee-cccccEEEEEEc--CCCcEEEEEeCCCeEEEEecC-C-----Cc--eeeeecceeeeec
Q psy8803 5 YEEYKRLDYHTPIVETEVLT-QHTHQVLHVSFS--HNGRYFATCSKDGYILVWTSS-Y-----PS--KVKYSHDMKTFSW 73 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~-~~~~~v~~i~~s--~~~~~l~s~~~d~~i~iw~~~-~-----~~--~~~~~~~~~~~~~ 73 (111)
.-..+.|||.+.+.....-. ...+.|.++.|. |+++.+++-|-...+.++--. . .. ..-..-.+.....
T Consensus 49 ~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~ 128 (631)
T PF12234_consen 49 SRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTP 128 (631)
T ss_pred CCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeecCCC
Confidence 44579999999876443322 346789999984 478888888888888888542 1 00 0001112333333
Q ss_pred CceeeEEEccCCCEEEEec
Q psy8803 74 KYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 74 ~~~~~v~~~~~~~~~~~~~ 92 (111)
+++..+.|.+++..++++|
T Consensus 129 h~Igds~Wl~~G~LvV~sG 147 (631)
T PF12234_consen 129 HPIGDSIWLKDGTLVVGSG 147 (631)
T ss_pred CCccceeEecCCeEEEEeC
Confidence 4566777887877666544
No 306
>PRK02888 nitrous-oxide reductase; Validated
Probab=95.79 E-value=0.37 Score=33.87 Aligned_cols=29 Identities=10% Similarity=0.226 Sum_probs=24.2
Q ss_pred eeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 76 TQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
...++++|++.++++++ ..+..|.|.|++
T Consensus 323 PHGV~vSPDGkylyVan-------klS~tVSVIDv~ 351 (635)
T PRK02888 323 PHGVNTSPDGKYFIANG-------KLSPTVTVIDVR 351 (635)
T ss_pred ccceEECCCCCEEEEeC-------CCCCcEEEEECh
Confidence 34689999999999988 778889998864
No 307
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=95.75 E-value=0.25 Score=33.00 Aligned_cols=42 Identities=19% Similarity=0.136 Sum_probs=33.1
Q ss_pred eeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCcee
Q psy8803 21 EVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKV 62 (111)
Q Consensus 21 ~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~ 62 (111)
..|......+..+..+|.+++.+....-|+|.++|+......
T Consensus 301 ~~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vv 342 (415)
T PF14655_consen 301 FGLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVV 342 (415)
T ss_pred EeeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhh
Confidence 334445567889999999999999888899999999875433
No 308
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=95.73 E-value=0.14 Score=37.67 Aligned_cols=91 Identities=9% Similarity=0.054 Sum_probs=55.5
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeC--C-CeEEEEecCCCcee-eeecceeeeecCceeeEEEc
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSK--D-GYILVWTSSYPSKV-KYSHDMKTFSWKYTQYSQFN 82 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~--d-~~i~iw~~~~~~~~-~~~~~~~~~~~~~~~~v~~~ 82 (111)
..+|+|+-. |+....-+.-.+.-.+++|.|.|++||+.-. + ..|.+|. +++..- ...-+. ...-..+..++|+
T Consensus 237 R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF~l~~-~~~~~~v~~l~Wn 313 (928)
T PF04762_consen 237 RVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE-RNGLRHGEFTLRF-DPEEEKVIELAWN 313 (928)
T ss_pred eEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe-cCCcEeeeEecCC-CCCCceeeEEEEC
Confidence 468999877 7776666655666678999999999999754 2 2343443 333222 111111 0011234567888
Q ss_pred cCCCEEEEeccccCCccccCceEEEee
Q psy8803 83 ESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
+++..+++.. ...|.+|-
T Consensus 314 ~ds~iLAv~~---------~~~vqLWt 331 (928)
T PF04762_consen 314 SDSEILAVWL---------EDRVQLWT 331 (928)
T ss_pred CCCCEEEEEe---------cCCceEEE
Confidence 8888887743 33388884
No 309
>KOG0882|consensus
Probab=95.73 E-value=0.01 Score=39.46 Aligned_cols=58 Identities=14% Similarity=0.130 Sum_probs=48.5
Q ss_pred cccccCeeeecCCCC--c-eeeeeeecccccEEEEEEcCCCcEEEEEeC-CCeEEEEecCCC
Q psy8803 2 KSWYEEYKRLDYHTP--I-VETEVLTQHTHQVLHVSFSHNGRYFATCSK-DGYILVWTSSYP 59 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~--~-~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~-d~~i~iw~~~~~ 59 (111)
+.+.||+++.|--.. + +-+..+..|.+.+..++.+.++.++.+.+. |+.++++|+++.
T Consensus 25 qASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~ 86 (558)
T KOG0882|consen 25 QASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENF 86 (558)
T ss_pred eeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeecc
Confidence 468899999998764 2 455566789999999999999999999777 999999999763
No 310
>KOG2041|consensus
Probab=95.72 E-value=0.069 Score=37.95 Aligned_cols=32 Identities=16% Similarity=0.254 Sum_probs=28.4
Q ss_pred cccEEEEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 27 THQVLHVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 27 ~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
.....|+.|..+..+|++|+.||.+++..+.+
T Consensus 14 nvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t 45 (1189)
T KOG2041|consen 14 NVKLHCAEWNKESGYIACGGADGLLKVLKLGT 45 (1189)
T ss_pred CceEEEEEEcccCCeEEeccccceeEEEEccc
Confidence 45678999999999999999999999998765
No 311
>KOG1912|consensus
Probab=95.66 E-value=0.071 Score=38.09 Aligned_cols=52 Identities=12% Similarity=0.098 Sum_probs=41.5
Q ss_pred eeeecCCCCceeeeeeecccccEEEEEEcCC------Cc------EEEEEeCCCeEEEEecCCC
Q psy8803 8 YKRLDYHTPIVETEVLTQHTHQVLHVSFSHN------GR------YFATCSKDGYILVWTSSYP 59 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~------~~------~l~s~~~d~~i~iw~~~~~ 59 (111)
.|.+-|.++.+.+..++-|...|..+.|.|. .. .|+++...|.|.+||....
T Consensus 36 lV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~ 99 (1062)
T KOG1912|consen 36 LVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLA 99 (1062)
T ss_pred eEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhh
Confidence 3566677888888999999999999999873 11 5677778899999998764
No 312
>KOG2041|consensus
Probab=95.60 E-value=0.044 Score=38.87 Aligned_cols=58 Identities=17% Similarity=0.217 Sum_probs=45.1
Q ss_pred cccccCeeeecCCCCc---------------eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCC
Q psy8803 2 KSWYEEYKRLDYHTPI---------------VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYP 59 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~---------------~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~ 59 (111)
.++-||.+++..+.+. ..-.+++||...|.-+.|....+.|-+...+|.|.+|-+..+
T Consensus 31 cgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykg 103 (1189)
T KOG2041|consen 31 CGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKG 103 (1189)
T ss_pred eccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCceEEEEeeecc
Confidence 4556777777665421 224467899999999999999999999999999999988654
No 313
>PRK04043 tolB translocation protein TolB; Provisional
Probab=95.58 E-value=0.41 Score=32.06 Aligned_cols=80 Identities=9% Similarity=0.069 Sum_probs=45.2
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEE-EEeCC--CeEEEEecCCCceeeeecceeeeecCceeeEEEcc
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFA-TCSKD--GYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~-s~~~d--~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
..|.++|+.+++... +....+......|+|||+.++ +.+.+ ..|.++++..+....-.. .... ...-.|+|
T Consensus 213 ~~Iyv~dl~tg~~~~-lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~-~~~~----d~~p~~SP 286 (419)
T PRK04043 213 PTLYKYNLYTGKKEK-IASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQITN-YPGI----DVNGNFVE 286 (419)
T ss_pred CEEEEEECCCCcEEE-EecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEEEccc-CCCc----cCccEECC
Confidence 456777776665433 222445556678999987554 44434 457777776654332110 0100 11236899
Q ss_pred CCCEEEEec
Q psy8803 84 SDTLLLVSG 92 (111)
Q Consensus 84 ~~~~~~~~~ 92 (111)
++..++.+.
T Consensus 287 DG~~I~F~S 295 (419)
T PRK04043 287 DDKRIVFVS 295 (419)
T ss_pred CCCEEEEEE
Confidence 998887765
No 314
>PRK02888 nitrous-oxide reductase; Validated
Probab=95.45 E-value=0.37 Score=33.90 Aligned_cols=97 Identities=9% Similarity=-0.018 Sum_probs=58.6
Q ss_pred cCeeeecCCCC----ceeeeeeecccccEEEEEEcCCCcEEEEEe-CCCeEEEEecCCCce-e----eeec-ceeeeec-
Q psy8803 6 EEYKRLDYHTP----IVETEVLTQHTHQVLHVSFSHNGRYFATCS-KDGYILVWTSSYPSK-V----KYSH-DMKTFSW- 73 (111)
Q Consensus 6 d~~i~iw~~~~----~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~-~d~~i~iw~~~~~~~-~----~~~~-~~~~~~~- 73 (111)
+++|.+.|..+ +..+...-.-......+.++|||++++.++ .+..+.+.|+..... + .... -+.....
T Consensus 295 gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevG 374 (635)
T PRK02888 295 GSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELG 374 (635)
T ss_pred CCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccC
Confidence 35688888876 322222222345667899999998766654 588999999986432 0 0000 0011110
Q ss_pred CceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 74 KYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 74 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
......+|.+++. ..++- .-|+.|..||+
T Consensus 375 lGPLHTaFDg~G~-aytsl-------f~dsqv~kwn~ 403 (635)
T PRK02888 375 LGPLHTAFDGRGN-AYTTL-------FLDSQIVKWNI 403 (635)
T ss_pred CCcceEEECCCCC-EEEeE-------eecceeEEEeh
Confidence 1234678888875 44554 66888999996
No 315
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=95.42 E-value=0.056 Score=33.88 Aligned_cols=30 Identities=20% Similarity=0.173 Sum_probs=26.8
Q ss_pred cEEEEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 29 QVLHVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 29 ~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
.=+.++||||+.+||.+...|+|+++|+..
T Consensus 45 QWRkl~WSpD~tlLa~a~S~G~i~vfdl~g 74 (282)
T PF15492_consen 45 QWRKLAWSPDCTLLAYAESTGTIRVFDLMG 74 (282)
T ss_pred hheEEEECCCCcEEEEEcCCCeEEEEeccc
Confidence 446799999999999999999999999864
No 316
>KOG3617|consensus
Probab=95.27 E-value=0.07 Score=38.67 Aligned_cols=56 Identities=16% Similarity=0.372 Sum_probs=46.7
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecC
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSS 57 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~ 57 (111)
.++--|-+.+|.....+.-..-..|...+..+.|||+|..++++..-|.+.+|...
T Consensus 76 ~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 76 QGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred hccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 44556778888887666555556799999999999999999999999999999875
No 317
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=95.24 E-value=0.27 Score=32.19 Aligned_cols=57 Identities=7% Similarity=0.100 Sum_probs=45.6
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCCCc-EEEEEe-CCCeEEEEecCCCceeee
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGR-YFATCS-KDGYILVWTSSYPSKVKY 64 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~-~l~s~~-~d~~i~iw~~~~~~~~~~ 64 (111)
++|.++|..+++.+..+. -...+..+.++||++ +|.... .++.+.++|..+.+....
T Consensus 279 ~~V~ViD~~t~kvi~~i~-vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~ 337 (352)
T TIGR02658 279 RFLFVVDAKTGKRLRKIE-LGHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSS 337 (352)
T ss_pred CEEEEEECCCCeEEEEEe-CCCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEee
Confidence 478899999888888776 245889999999988 766655 577899999998876663
No 318
>KOG2444|consensus
Probab=95.23 E-value=0.083 Score=32.26 Aligned_cols=61 Identities=5% Similarity=-0.123 Sum_probs=34.3
Q ss_pred ccccCeeeecCCCCc-eeeeeeecccccEEEEEE-cCCCcEEEEEeCCCeEEEEecCCCceee
Q psy8803 3 SWYEEYKRLDYHTPI-VETEVLTQHTHQVLHVSF-SHNGRYFATCSKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~-~~~~~~~~~~~~v~~i~~-s~~~~~l~s~~~d~~i~iw~~~~~~~~~ 63 (111)
+..||.|.+|+.... ...-....-...+-++-- -.++.+..+++.++.|+.|++...+...
T Consensus 76 G~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g 138 (238)
T KOG2444|consen 76 GTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLG 138 (238)
T ss_pred ecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceee
Confidence 456777777777621 111111111122233211 2235577888899999999998776655
No 319
>KOG1008|consensus
Probab=95.12 E-value=0.0051 Score=42.46 Aligned_cols=102 Identities=16% Similarity=0.130 Sum_probs=59.7
Q ss_pred cccccCeeeecCCCCcee--eeeeecccccEEEEEEcC-CCcEEEEEe----CCCeEEEEecCCCceee-eecceeeeec
Q psy8803 2 KSWYEEYKRLDYHTPIVE--TEVLTQHTHQVLHVSFSH-NGRYFATCS----KDGYILVWTSSYPSKVK-YSHDMKTFSW 73 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~--~~~~~~~~~~v~~i~~s~-~~~~l~s~~----~d~~i~iw~~~~~~~~~-~~~~~~~~~~ 73 (111)
++..+|.|-+-..+...- -....+|...+.+++|.+ |.++||.|- .|..++|||+...-... ..........
T Consensus 75 vG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l 154 (783)
T KOG1008|consen 75 VGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTL 154 (783)
T ss_pred hccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccccccc
Confidence 455567777766653311 122346778899999988 567787773 25679999998752211 1001111111
Q ss_pred CceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 74 KYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 74 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
...+.+++- .+..++.+| ...+.++++|+|
T Consensus 155 ~gqns~cwl-rd~klvlaG-------m~sr~~~ifdlR 184 (783)
T KOG1008|consen 155 DGQNSVCWL-RDTKLVLAG-------MTSRSVHIFDLR 184 (783)
T ss_pred cCccccccc-cCcchhhcc-------cccchhhhhhhh
Confidence 233455666 444555666 667788888875
No 320
>KOG4640|consensus
Probab=95.11 E-value=0.18 Score=35.09 Aligned_cols=72 Identities=13% Similarity=0.212 Sum_probs=49.7
Q ss_pred cccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCce-eeEEEccCCCEEEEeccccCCccccCceE
Q psy8803 27 THQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYT-QYSQFNESDTLLLVSGVHFGTPQSTSGEI 105 (111)
Q Consensus 27 ~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~i 105 (111)
...+..+.|+|.-.+||.+..++.+.+..+...+.--. +++. .++ .+.+|.|++..+ +.| -.||+|
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n~qRlwti--p~p~---~~v~~sL~W~~DGkll-aVg-------~kdG~I 86 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLNWQRLWTI--PIPG---ENVTASLCWRPDGKLL-AVG-------FKDGTI 86 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEeccceeEec--cCCC---CccceeeeecCCCCEE-EEE-------ecCCeE
Confidence 45788999999999999999999888887763221110 0110 112 367788897666 445 678999
Q ss_pred EEeecC
Q psy8803 106 AVFSLQ 111 (111)
Q Consensus 106 ~iw~~~ 111 (111)
++.|++
T Consensus 87 ~L~Dve 92 (665)
T KOG4640|consen 87 RLHDVE 92 (665)
T ss_pred EEEEcc
Confidence 999864
No 321
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=95.11 E-value=0.34 Score=32.70 Aligned_cols=50 Identities=16% Similarity=0.118 Sum_probs=33.2
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecC
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSS 57 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~ 57 (111)
.++.|.+||..+++.+..+.-. .|..+.|++++.+++-.+.+ .+.+.+..
T Consensus 124 ~~~~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~-~i~il~~~ 173 (443)
T PF04053_consen 124 SSDFICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD-SIYILKYN 173 (443)
T ss_dssp ETTEEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEEE-
T ss_pred CCCCEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCC-eEEEEEec
Confidence 3457999999999999888633 48999999999999998865 66666654
No 322
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=94.96 E-value=0.42 Score=32.64 Aligned_cols=89 Identities=16% Similarity=0.128 Sum_probs=53.2
Q ss_pred eeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEe--CCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCC
Q psy8803 8 YKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCS--KDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESD 85 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 85 (111)
.+.|++++... +.....-.+.|...+|.|+++-++..+ .+..+.++|++....... .. .+-+++-|+|..
T Consensus 256 nLyl~~~~e~~-i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~Nl~~~~----Pe---~~rNT~~fsp~~ 327 (561)
T COG5354 256 NLYLLRITERS-IPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGNLRFYF----PE---QKRNTIFFSPHE 327 (561)
T ss_pred eEEEEeecccc-cceeccccccceeeeecccCCceeEEecccccceeecccccceEEec----CC---cccccccccCcc
Confidence 34555555222 222224578899999999877666554 677899999987643321 00 123356677888
Q ss_pred CEEEEeccccCCccccCceEEEee
Q psy8803 86 TLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
.+++..|.+-.. +.|.|||
T Consensus 328 r~il~agF~nl~-----gni~i~~ 346 (561)
T COG5354 328 RYILFAGFDNLQ-----GNIEIFD 346 (561)
T ss_pred cEEEEecCCccc-----cceEEec
Confidence 887776644322 3366665
No 323
>KOG2066|consensus
Probab=94.86 E-value=0.23 Score=35.51 Aligned_cols=53 Identities=6% Similarity=0.041 Sum_probs=40.1
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCC-----CcEEEEEeCCCeEEEEe
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHN-----GRYFATCSKDGYILVWT 55 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~-----~~~l~s~~~d~~i~iw~ 55 (111)
|+.+.||+|.|-...+......+. ....+..++++|+ .+.+++||..| +.++.
T Consensus 87 asCS~DGkv~I~sl~~~~~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~e 144 (846)
T KOG2066|consen 87 ASCSDDGKVVIGSLFTDDEITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSE 144 (846)
T ss_pred EEecCCCcEEEeeccCCccceeEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEeh
Confidence 467889999998887776655554 3458899999997 46899999877 65554
No 324
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=94.82 E-value=0.055 Score=38.81 Aligned_cols=55 Identities=13% Similarity=0.177 Sum_probs=42.9
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEec
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTS 56 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~ 56 (111)
|+++.+|-||+||-........|.+-..+|..|..+.||++++..+. ..|.+++.
T Consensus 592 avgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~-tyLlLi~t 646 (794)
T PF08553_consen 592 AVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCK-TYLLLIDT 646 (794)
T ss_pred EEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeec-ceEEEEEE
Confidence 56889999999996544444555667789999999999999888775 46667765
No 325
>KOG3621|consensus
Probab=94.77 E-value=0.16 Score=35.77 Aligned_cols=89 Identities=12% Similarity=-0.073 Sum_probs=54.5
Q ss_pred ccccCeeeecCCCCcee-eeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee--eecceeeeecCceeeE
Q psy8803 3 SWYEEYKRLDYHTPIVE-TEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK--YSHDMKTFSWKYTQYS 79 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~-~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~--~~~~~~~~~~~~~~~v 79 (111)
+..-|.+.+|+-..++. +.+.++-.+.+..+..+++..+.|.|+..+.+.++.+....... +....-...-..++++
T Consensus 51 GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal 130 (726)
T KOG3621|consen 51 GSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTAL 130 (726)
T ss_pred ecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEE
Confidence 45567777777765543 33334455666677789999999999999999999886532111 1000000001245667
Q ss_pred EEccCCCEEEEec
Q psy8803 80 QFNESDTLLLVSG 92 (111)
Q Consensus 80 ~~~~~~~~~~~~~ 92 (111)
+|++++..+ .+|
T Consensus 131 ~Ws~~~~k~-ysG 142 (726)
T KOG3621|consen 131 EWSKNGMKL-YSG 142 (726)
T ss_pred EecccccEE-eec
Confidence 778888776 555
No 326
>KOG1008|consensus
Probab=94.56 E-value=0.012 Score=40.76 Aligned_cols=91 Identities=12% Similarity=0.168 Sum_probs=54.9
Q ss_pred ccCeeeecCCCCc--eeee--eeec-ccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 5 YEEYKRLDYHTPI--VETE--VLTQ-HTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 5 ~d~~i~iw~~~~~--~~~~--~~~~-~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
.|..+.|||+.++ .+.. .|.+ .......++|-.+.+++++|...+.++++|++....... .+.. ..++.+
T Consensus 127 nds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~--svnT---k~vqG~ 201 (783)
T KOG1008|consen 127 NDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVS--SVNT---KYVQGI 201 (783)
T ss_pred ccCCccceecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhh--hhhh---hhcccc
Confidence 4667999999876 2221 2222 333445778888888999998888999999984221110 1111 122233
Q ss_pred EEcc-CCCEEEEeccccCCccccCceEEEee
Q psy8803 80 QFNE-SDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 80 ~~~~-~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
.-.| ...+++. ..++.|.+||
T Consensus 202 tVdp~~~nY~cs---------~~dg~iAiwD 223 (783)
T KOG1008|consen 202 TVDPFSPNYFCS---------NSDGDIAIWD 223 (783)
T ss_pred eecCCCCCceec---------cccCceeecc
Confidence 3344 4445544 4589999999
No 327
>KOG2066|consensus
Probab=94.46 E-value=0.46 Score=34.16 Aligned_cols=50 Identities=22% Similarity=0.438 Sum_probs=32.6
Q ss_pred CCCcEEEEEeCCCeEEEEecCCCceee-eecceeeeecCceeeEEEccC----CCEEEEec
Q psy8803 37 HNGRYFATCSKDGYILVWTSSYPSKVK-YSHDMKTFSWKYTQYSQFNES----DTLLLVSG 92 (111)
Q Consensus 37 ~~~~~l~s~~~d~~i~iw~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~----~~~~~~~~ 92 (111)
.+|.++++|+.||++.|..+.+..... +.-. .|+..|+++|+ ....+++|
T Consensus 81 ~~Gey~asCS~DGkv~I~sl~~~~~~~~~df~------rpiksial~Pd~~~~~sk~fv~G 135 (846)
T KOG2066|consen 81 LEGEYVASCSDDGKVVIGSLFTDDEITQYDFK------RPIKSIALHPDFSRQQSKQFVSG 135 (846)
T ss_pred cCCceEEEecCCCcEEEeeccCCccceeEecC------CcceeEEeccchhhhhhhheeec
Confidence 359999999999999999887654332 2111 24556677776 33445555
No 328
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=94.20 E-value=0.22 Score=22.63 Aligned_cols=28 Identities=21% Similarity=0.439 Sum_probs=21.2
Q ss_pred ceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 75 YTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.++.++|+|....++. + ..+|.|.++.+
T Consensus 13 ~v~~~~w~P~mdLiA~-~-------t~~g~v~v~Rl 40 (47)
T PF12894_consen 13 RVSCMSWCPTMDLIAL-G-------TEDGEVLVYRL 40 (47)
T ss_pred cEEEEEECCCCCEEEE-E-------ECCCeEEEEEC
Confidence 4567888998877654 4 67899999875
No 329
>KOG3617|consensus
Probab=94.14 E-value=0.092 Score=38.11 Aligned_cols=70 Identities=10% Similarity=0.052 Sum_probs=48.3
Q ss_pred cEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEe
Q psy8803 29 QVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVF 108 (111)
Q Consensus 29 ~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw 108 (111)
.+..++|+|..-.|+.+=+-+.+.+|.....+.- .+....-.+++.+.|++++..+ .++ ..-|.+..|
T Consensus 61 hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~h----tv~~th~a~i~~l~wS~~G~~l-~t~-------d~~g~v~lw 128 (1416)
T KOG3617|consen 61 HATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETH----TVVETHPAPIQGLDWSHDGTVL-MTL-------DNPGSVHLW 128 (1416)
T ss_pred ehhhhccChHHHHHhhccccceeEEEecCCceee----eeccCCCCCceeEEecCCCCeE-EEc-------CCCceeEEE
Confidence 3456899998888888888888999977653321 1222222567778889898876 444 556678888
Q ss_pred ec
Q psy8803 109 SL 110 (111)
Q Consensus 109 ~~ 110 (111)
..
T Consensus 129 r~ 130 (1416)
T KOG3617|consen 129 RY 130 (1416)
T ss_pred Ee
Confidence 64
No 330
>KOG4649|consensus
Probab=93.99 E-value=0.95 Score=28.68 Aligned_cols=61 Identities=11% Similarity=-0.036 Sum_probs=46.7
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEE-EEEEcCCCcEEEEEeCCCeEEEEecCCCceee
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVL-HVSFSHNGRYFATCSKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~-~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~ 63 (111)
.+.+.|.+.+.+..+|+.+.++..-. .|. .....+++.+|-+++.|+..+..|.+...+..
T Consensus 68 ~GCy~g~lYfl~~~tGs~~w~f~~~~-~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVy 129 (354)
T KOG4649|consen 68 LGCYSGGLYFLCVKTGSQIWNFVILE-TVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVY 129 (354)
T ss_pred EEEccCcEEEEEecchhheeeeeehh-hhccceEEcCCCceEEEecCCCcEEEecccccceEE
Confidence 35678888888889998887776433 333 33457889999999999999999998765554
No 331
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=93.95 E-value=1 Score=28.95 Aligned_cols=97 Identities=12% Similarity=0.144 Sum_probs=58.5
Q ss_pred cCeeeecCCCCceeeee--e--ecccccEEEEEEcCCCcEEEEEeCCC-------eEEEEecCCC-ceeeeecce-eeee
Q psy8803 6 EEYKRLDYHTPIVETEV--L--TQHTHQVLHVSFSHNGRYFATCSKDG-------YILVWTSSYP-SKVKYSHDM-KTFS 72 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~--~--~~~~~~v~~i~~s~~~~~l~s~~~d~-------~i~iw~~~~~-~~~~~~~~~-~~~~ 72 (111)
+..+.+-|..+|+.+.. + .-|.-.+..+++.++|..++..-..+ .+.+++.... ..+...... ..+.
T Consensus 137 ~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~ 216 (305)
T PF07433_consen 137 QPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLN 216 (305)
T ss_pred CCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhC
Confidence 44555667777876665 4 23777899999999988766553222 1222222211 111100011 1111
Q ss_pred cCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 73 WKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 73 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.++=+|++++++..+++++ ...+.+.+||.
T Consensus 217 -~Y~gSIa~~~~g~~ia~ts-------PrGg~~~~~d~ 246 (305)
T PF07433_consen 217 -GYIGSIAADRDGRLIAVTS-------PRGGRVAVWDA 246 (305)
T ss_pred -CceEEEEEeCCCCEEEEEC-------CCCCEEEEEEC
Confidence 3556889999999998888 88899999985
No 332
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=93.93 E-value=0.84 Score=27.83 Aligned_cols=29 Identities=24% Similarity=0.508 Sum_probs=23.1
Q ss_pred EcCCCcEEEEEeCCCeEEEEecCCCceee
Q psy8803 35 FSHNGRYFATCSKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 35 ~s~~~~~l~s~~~d~~i~iw~~~~~~~~~ 63 (111)
+...++++++-..+|.+++||+...+...
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~ 46 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVL 46 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeecc
Confidence 34568888888899999999999865543
No 333
>KOG2444|consensus
Probab=93.82 E-value=0.078 Score=32.38 Aligned_cols=57 Identities=12% Similarity=0.078 Sum_probs=36.5
Q ss_pred cccccCeeeecCCCCceeeeeeeccc-ccEEEEEEcCCCcEEEEE--eCCCeEEEEecCC
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHT-HQVLHVSFSHNGRYFATC--SKDGYILVWTSSY 58 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~-~~v~~i~~s~~~~~l~s~--~~d~~i~iw~~~~ 58 (111)
++.+||-|+.|++.+++.+-....|+ ..+.....+..+..++.+ |.|..++.|++..
T Consensus 119 ~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 119 VGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred EeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 56789999999999888766666666 333333333344555555 6666666676654
No 334
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=93.70 E-value=1.1 Score=28.47 Aligned_cols=56 Identities=5% Similarity=-0.097 Sum_probs=40.0
Q ss_pred cccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEe------CCCeEEEEecCCC
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCS------KDGYILVWTSSYP 59 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~------~d~~i~iw~~~~~ 59 (111)
.....+++||+...+=..--.+-++.|..+.|..+.++++.|. ....+..||....
T Consensus 13 L~C~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~ 74 (281)
T PF12768_consen 13 LPCPGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQ 74 (281)
T ss_pred cCCCEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCC
Confidence 3567899999886543322234568999999997788888874 3556888888764
No 335
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=93.49 E-value=1.4 Score=28.83 Aligned_cols=58 Identities=12% Similarity=-0.050 Sum_probs=36.6
Q ss_pred cccCeeeecCCCCceeeeeeeccccc-EEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQHTHQ-VLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~~~~-v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~ 63 (111)
..||.+..+|..+++.+......... ...... .+..+..++.++.+.++|..+++...
T Consensus 286 ~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~ 344 (377)
T TIGR03300 286 DADGVVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVA 344 (377)
T ss_pred CCCCeEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 45778888888777765444221111 111111 36678888899999999998876553
No 336
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=93.22 E-value=0.69 Score=33.59 Aligned_cols=84 Identities=8% Similarity=-0.025 Sum_probs=51.2
Q ss_pred cccCeeeecCCCCc-eeeeeeec----ccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceee
Q psy8803 4 WYEEYKRLDYHTPI-VETEVLTQ----HTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQY 78 (111)
Q Consensus 4 ~~d~~i~iw~~~~~-~~~~~~~~----~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (111)
-.+..+..||.+-. ..+..-.. ......|++-.. .-+||.|+.+|.|++||--. ...+ ..++.+. .|+..
T Consensus 549 ls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt~-~G~iavgs~~G~IRLyd~~g-~~AK--T~lp~lG-~pI~~ 623 (794)
T PF08553_consen 549 LSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATTE-DGYIAVGSNKGDIRLYDRLG-KRAK--TALPGLG-DPIIG 623 (794)
T ss_pred ECCCceEEeccCCCCCceeeccccccccCCCceEEEecC-CceEEEEeCCCcEEeecccc-hhhh--hcCCCCC-CCeeE
Confidence 35667778888742 22221111 234555655444 44688899999999998432 2111 1233333 67888
Q ss_pred EEEccCCCEEEEec
Q psy8803 79 SQFNESDTLLLVSG 92 (111)
Q Consensus 79 v~~~~~~~~~~~~~ 92 (111)
|.-+.++.++++++
T Consensus 624 iDvt~DGkwilaTc 637 (794)
T PF08553_consen 624 IDVTADGKWILATC 637 (794)
T ss_pred EEecCCCcEEEEee
Confidence 88888999998876
No 337
>PRK04043 tolB translocation protein TolB; Provisional
Probab=93.20 E-value=1.7 Score=29.17 Aligned_cols=72 Identities=11% Similarity=0.101 Sum_probs=42.1
Q ss_pred cEEEEEEcCCCcE-EEEEe-C--CCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCce
Q psy8803 29 QVLHVSFSHNGRY-FATCS-K--DGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGE 104 (111)
Q Consensus 29 ~v~~i~~s~~~~~-l~s~~-~--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (111)
....-.|+|||+. ++-.+ . ...|.++|+.+++...-.. .. .......|+|++..++.+... ..+..
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~----g~~~~~~~SPDG~~la~~~~~-----~g~~~ 258 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQ----GMLVVSDVSKDGSKLLLTMAP-----KGQPD 258 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CC----CcEEeeEECCCCCEEEEEEcc-----CCCcE
Confidence 6778899999873 55433 2 3568888887765443111 00 112235689999888776522 12345
Q ss_pred EEEeec
Q psy8803 105 IAVFSL 110 (111)
Q Consensus 105 i~iw~~ 110 (111)
|.++|+
T Consensus 259 Iy~~dl 264 (419)
T PRK04043 259 IYLYDT 264 (419)
T ss_pred EEEEEC
Confidence 666554
No 338
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=92.96 E-value=2.9 Score=31.22 Aligned_cols=61 Identities=7% Similarity=0.111 Sum_probs=42.5
Q ss_pred cccEEEEEEcCCCcEEEEEeCCCeEEEE----ecCCCceeeeecceeeeecCceeeEEEccCCCEEEEec
Q psy8803 27 THQVLHVSFSHNGRYFATCSKDGYILVW----TSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 27 ~~~v~~i~~s~~~~~l~s~~~d~~i~iw----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 92 (111)
.+.|..+.+-++...++.+..+|.|.+. +....... .+-.+. ..+.+++|+|++..++...
T Consensus 75 ~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E----~VG~vd-~GI~a~~WSPD~Ella~vT 139 (928)
T PF04762_consen 75 NDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEIE----IVGSVD-SGILAASWSPDEELLALVT 139 (928)
T ss_pred CCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeE----EEEEEc-CcEEEEEECCCcCEEEEEe
Confidence 4678899999999888888889999888 44433222 122222 4567788899988776654
No 339
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=92.78 E-value=1.1 Score=30.19 Aligned_cols=77 Identities=13% Similarity=0.095 Sum_probs=42.4
Q ss_pred eeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEE-EeCCCe--EEEEecCCCceee--eecceeeeecCceeeEEEc
Q psy8803 8 YKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFAT-CSKDGY--ILVWTSSYPSKVK--YSHDMKTFSWKYTQYSQFN 82 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s-~~~d~~--i~iw~~~~~~~~~--~~~~~~~~~~~~~~~v~~~ 82 (111)
.+.++++.+++....+. ..+.-..-.|+|||+.|+- ...|+. |.+.|+....... +...+.. .=.|+
T Consensus 219 ~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~~-------~Ps~s 290 (425)
T COG0823 219 RIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINT-------SPSWS 290 (425)
T ss_pred eEEEEeccCCccceeec-cCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCcceecccCCcccc-------CccCC
Confidence 46667777664333332 2334456789999876544 456665 4555555544222 1111111 12478
Q ss_pred cCCCEEEEec
Q psy8803 83 ESDTLLLVSG 92 (111)
Q Consensus 83 ~~~~~~~~~~ 92 (111)
|++..++...
T Consensus 291 pdG~~ivf~S 300 (425)
T COG0823 291 PDGSKIVFTS 300 (425)
T ss_pred CCCCEEEEEe
Confidence 8999887776
No 340
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=92.66 E-value=1.8 Score=27.91 Aligned_cols=75 Identities=16% Similarity=0.192 Sum_probs=49.1
Q ss_pred EEEEcC-CCcEEEEEeCCC-eEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEee
Q psy8803 32 HVSFSH-NGRYFATCSKDG-YILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 32 ~i~~s~-~~~~l~s~~~d~-~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
.++.+| +...++.+-..+ ...+||.+++............ ...=.-.|++++..++++-.++.. ..|.|-|||
T Consensus 9 ~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gR--HFyGHg~fs~dG~~LytTEnd~~~---g~G~IgVyd 83 (305)
T PF07433_consen 9 GVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGR--HFYGHGVFSPDGRLLYTTENDYET---GRGVIGVYD 83 (305)
T ss_pred ceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCC--EEecCEEEcCCCCEEEEeccccCC---CcEEEEEEE
Confidence 466788 456666676665 4779999887665421111111 111256899999999888766644 578899999
Q ss_pred cC
Q psy8803 110 LQ 111 (111)
Q Consensus 110 ~~ 111 (111)
.+
T Consensus 84 ~~ 85 (305)
T PF07433_consen 84 AA 85 (305)
T ss_pred Cc
Confidence 64
No 341
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=92.32 E-value=1.5 Score=26.33 Aligned_cols=57 Identities=9% Similarity=-0.109 Sum_probs=37.8
Q ss_pred ccCeeeecCCCCceeeeeeecc--cccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCcee
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQH--THQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKV 62 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~--~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~ 62 (111)
.+|+|..+|..+++.+-...-- .....+. ..+++..++.++.++.+..+|..+++..
T Consensus 1 ~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~l~~~d~~tG~~~ 59 (238)
T PF13360_consen 1 DDGTLSALDPRTGKELWSYDLGPGIGGPVAT-AVPDGGRVYVASGDGNLYALDAKTGKVL 59 (238)
T ss_dssp -TSEEEEEETTTTEEEEEEECSSSCSSEEET-EEEETTEEEEEETTSEEEEEETTTSEEE
T ss_pred CCCEEEEEECCCCCEEEEEECCCCCCCccce-EEEeCCEEEEEcCCCEEEEEECCCCCEE
Confidence 3789999999999887766421 1111211 2324556666678999999999887654
No 342
>KOG2114|consensus
Probab=92.31 E-value=3.1 Score=30.59 Aligned_cols=80 Identities=4% Similarity=-0.036 Sum_probs=47.9
Q ss_pred eeeecCCCCc---e---ee--eeeec-----ccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecC
Q psy8803 8 YKRLDYHTPI---V---ET--EVLTQ-----HTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWK 74 (111)
Q Consensus 8 ~i~iw~~~~~---~---~~--~~~~~-----~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 74 (111)
.+++|++... . ++ +.+.+ ...++..++.+.+-+.+|+|-.||.|..+.=.-.+............-.
T Consensus 93 llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~ 172 (933)
T KOG2114|consen 93 LLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKE 172 (933)
T ss_pred EEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCC
Confidence 7999999743 1 22 12222 2467888999999999999999999988742211100000011111124
Q ss_pred ceeeEEEccCCCE
Q psy8803 75 YTQYSQFNESDTL 87 (111)
Q Consensus 75 ~~~~v~~~~~~~~ 87 (111)
|++.+++..++..
T Consensus 173 pITgL~~~~d~~s 185 (933)
T KOG2114|consen 173 PITGLALRSDGKS 185 (933)
T ss_pred CceeeEEecCCce
Confidence 6777877777765
No 343
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=92.25 E-value=1.3 Score=28.93 Aligned_cols=55 Identities=7% Similarity=-0.104 Sum_probs=35.2
Q ss_pred cccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCcee
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKV 62 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~ 62 (111)
..+|.+..+|..+++.+-.... . .... ...++..+..++.++.+..+|..+++..
T Consensus 248 ~~~g~l~a~d~~tG~~~W~~~~-~-~~~~--p~~~~~~vyv~~~~G~l~~~d~~tG~~~ 302 (377)
T TIGR03300 248 SYQGRVAALDLRSGRVLWKRDA-S-SYQG--PAVDDNRLYVTDADGVVVALDRRSGSEL 302 (377)
T ss_pred EcCCEEEEEECCCCcEEEeecc-C-CccC--ceEeCCEEEEECCCCeEEEEECCCCcEE
Confidence 4577888888888876554431 1 1111 1124566667778899999999876543
No 344
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=92.04 E-value=1.2 Score=24.30 Aligned_cols=18 Identities=22% Similarity=0.108 Sum_probs=13.3
Q ss_pred cEEEEEeCCCeEEEEecC
Q psy8803 40 RYFATCSKDGYILVWTSS 57 (111)
Q Consensus 40 ~~l~s~~~d~~i~iw~~~ 57 (111)
+.|+.|++|..|++|+-.
T Consensus 16 ~eLlvGs~D~~IRvf~~~ 33 (111)
T PF14783_consen 16 NELLVGSDDFEIRVFKGD 33 (111)
T ss_pred ceEEEecCCcEEEEEeCC
Confidence 467778888888888544
No 345
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=92.02 E-value=2.3 Score=27.79 Aligned_cols=96 Identities=10% Similarity=0.096 Sum_probs=58.5
Q ss_pred cCeeeecCCCCce---eeeeeecccccEEEEEEcCCCcEEEEEeC---CCeEEEEecCC--CceeeeecceeeeecCcee
Q psy8803 6 EEYKRLDYHTPIV---ETEVLTQHTHQVLHVSFSHNGRYFATCSK---DGYILVWTSSY--PSKVKYSHDMKTFSWKYTQ 77 (111)
Q Consensus 6 d~~i~iw~~~~~~---~~~~~~~~~~~v~~i~~s~~~~~l~s~~~---d~~i~iw~~~~--~~~~~~~~~~~~~~~~~~~ 77 (111)
+..|.+|++.+.. ....+-...+...-++|+|+++.|.++.. .+.+.-|.+.. +....-.. .. ..-++..
T Consensus 15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~-~~-~~g~~p~ 92 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNR-QT-LPGSPPC 92 (346)
T ss_pred CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeec-cc-cCCCCCe
Confidence 4668888887331 11222346678899999999987777643 57788777764 44332111 11 1124457
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.++.++++..++++. =..+.|.++-+
T Consensus 93 yvsvd~~g~~vf~An-------Y~~g~v~v~p~ 118 (346)
T COG2706 93 YVSVDEDGRFVFVAN-------YHSGSVSVYPL 118 (346)
T ss_pred EEEECCCCCEEEEEE-------ccCceEEEEEc
Confidence 889999998887765 22345666543
No 346
>KOG2395|consensus
Probab=92.00 E-value=1.6 Score=30.40 Aligned_cols=85 Identities=8% Similarity=0.032 Sum_probs=45.6
Q ss_pred ccccCeeeecCCC-Cce-eeeeeeccc----ccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCce
Q psy8803 3 SWYEEYKRLDYHT-PIV-ETEVLTQHT----HQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYT 76 (111)
Q Consensus 3 ~~~d~~i~iw~~~-~~~-~~~~~~~~~----~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 76 (111)
+..|..|.=||.+ .++ .+..-++|+ ....|.+-- ..-+|+.|+.+|.|++||--. ...+. ..+.+. .++
T Consensus 400 GLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT-~sG~IvvgS~~GdIRLYdri~-~~AKT--AlPgLG-~~I 474 (644)
T KOG2395|consen 400 GLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATT-ESGYIVVGSLKGDIRLYDRIG-RRAKT--ALPGLG-DAI 474 (644)
T ss_pred eecCCceEEecccccCcceeeeeeccccccccccceeeec-CCceEEEeecCCcEEeehhhh-hhhhh--cccccC-Cce
Confidence 4566777777876 222 122222332 222333222 345789999999999998632 11110 122221 345
Q ss_pred eeEEEccCCCEEEEec
Q psy8803 77 QYSQFNESDTLLLVSG 92 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~ 92 (111)
..|.-+.++..+++++
T Consensus 475 ~hVdvtadGKwil~Tc 490 (644)
T KOG2395|consen 475 KHVDVTADGKWILATC 490 (644)
T ss_pred eeEEeeccCcEEEEec
Confidence 5565566777777765
No 347
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=91.90 E-value=2.2 Score=28.97 Aligned_cols=47 Identities=13% Similarity=0.257 Sum_probs=28.1
Q ss_pred CcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEec
Q psy8803 39 GRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 39 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 92 (111)
|.+|+..+.+ .+.+||+.+...... +...++..|.|++++.+++..+
T Consensus 117 G~LL~~~~~~-~i~~yDw~~~~~i~~------i~v~~vk~V~Ws~~g~~val~t 163 (443)
T PF04053_consen 117 GNLLGVKSSD-FICFYDWETGKLIRR------IDVSAVKYVIWSDDGELVALVT 163 (443)
T ss_dssp SSSEEEEETT-EEEEE-TTT--EEEE------ESS-E-EEEEE-TTSSEEEEE-
T ss_pred CcEEEEECCC-CEEEEEhhHcceeeE------EecCCCcEEEEECCCCEEEEEe
Confidence 8877777654 899999998766542 1223345677788888887754
No 348
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=91.19 E-value=1 Score=31.11 Aligned_cols=34 Identities=15% Similarity=0.292 Sum_probs=25.6
Q ss_pred cEEEEEEcC----CCcEEEEEeCCCeEEEEecCCCcee
Q psy8803 29 QVLHVSFSH----NGRYFATCSKDGYILVWTSSYPSKV 62 (111)
Q Consensus 29 ~v~~i~~s~----~~~~l~s~~~d~~i~iw~~~~~~~~ 62 (111)
.+..+..+. +..++++-+.|+++++||+.+..+.
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~ 253 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCL 253 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEE
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEE
Confidence 445556665 6788999999999999999988763
No 349
>KOG1920|consensus
Probab=91.07 E-value=5.7 Score=30.43 Aligned_cols=50 Identities=12% Similarity=0.027 Sum_probs=31.8
Q ss_pred cCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEec
Q psy8803 6 EEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTS 56 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~ 56 (111)
+|.|-+-|..+.... ...--...|.+++|+||+++++-.....++.+..-
T Consensus 89 ~G~iilvd~et~~~e-ivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~ 138 (1265)
T KOG1920|consen 89 LGDIILVDPETLELE-IVGNVDNGISAASWSPDEELLALITGRQTLLFMTK 138 (1265)
T ss_pred CCcEEEEccccccee-eeeeccCceEEEeecCCCcEEEEEeCCcEEEEEec
Confidence 445555454433221 11224578999999999999888877777766543
No 350
>KOG2079|consensus
Probab=90.92 E-value=0.29 Score=36.28 Aligned_cols=63 Identities=14% Similarity=0.151 Sum_probs=42.4
Q ss_pred CCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 38 NGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 38 ~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.+.+++.|+..|-+...|+...-...|...-. -.|+.+++|+.++..+ ..| =.+|.|.+||+.
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v---~~~Vtsvafn~dg~~l-~~G-------~~~G~V~v~D~~ 160 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERV---QGPVTSVAFNQDGSLL-LAG-------LGDGHVTVWDMH 160 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccchhhcCCcc---CCcceeeEecCCCcee-ccc-------cCCCcEEEEEcc
Confidence 45678888888888888887642222221111 1577789999888765 444 568889999973
No 351
>KOG0882|consensus
Probab=90.71 E-value=3.5 Score=28.19 Aligned_cols=99 Identities=10% Similarity=0.116 Sum_probs=66.2
Q ss_pred cccCeeeecCCCCce--eeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCC---------ceeeeeccee---
Q psy8803 4 WYEEYKRLDYHTPIV--ETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYP---------SKVKYSHDMK--- 69 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~---------~~~~~~~~~~--- 69 (111)
..++.+.++|-.... ....-+-|..+|.++.+.|-+..+++....|-|.-|..... ..+++.....
T Consensus 119 ~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~ 198 (558)
T KOG0882|consen 119 FKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFP 198 (558)
T ss_pred ccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhccc
Confidence 456778888877543 22233469999999999999999999988899999988731 0111111111
Q ss_pred eeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 70 TFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 70 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
... ....++.|+|++..+... +.|..|++++++
T Consensus 199 K~K-t~pts~Efsp~g~qistl--------~~DrkVR~F~~K 231 (558)
T KOG0882|consen 199 KAK-TEPTSFEFSPDGAQISTL--------NPDRKVRGFVFK 231 (558)
T ss_pred ccc-cCccceEEccccCccccc--------CcccEEEEEEec
Confidence 011 124567899998887654 468889988753
No 352
>KOG2395|consensus
Probab=90.35 E-value=0.42 Score=32.98 Aligned_cols=56 Identities=16% Similarity=0.181 Sum_probs=43.6
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecC
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSS 57 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~ 57 (111)
|+++-+|.||+||-........|.+-...|..+..+.+|.+|++.+. ..+.+.++.
T Consensus 445 vvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~-tyLlLi~t~ 500 (644)
T KOG2395|consen 445 VVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATCK-TYLLLIDTL 500 (644)
T ss_pred EEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEecc-cEEEEEEEe
Confidence 35778999999998544556667778889999999999999887775 466666654
No 353
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=89.95 E-value=2.1 Score=26.12 Aligned_cols=53 Identities=11% Similarity=0.011 Sum_probs=38.9
Q ss_pred ccCeeeecCCCCceeeeee-------e-------cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 5 YEEYKRLDYHTPIVETEVL-------T-------QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~-------~-------~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
-+|.+.+||+..++.+..- . .....|..+....+|..+++-+ ++..+.|+..-
T Consensus 30 ~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L 96 (219)
T PF07569_consen 30 SSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL 96 (219)
T ss_pred CCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence 4799999999877543322 1 2456788888898899888776 56788888764
No 354
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=89.71 E-value=2.6 Score=25.30 Aligned_cols=58 Identities=5% Similarity=-0.154 Sum_probs=36.6
Q ss_pred cccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~ 63 (111)
..++.+..+|+.+|+.+-.+.. .+.+...-.. ++..++.+..++.+..+|..+++..-
T Consensus 43 ~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~~~-~~~~v~v~~~~~~l~~~d~~tG~~~W 100 (238)
T PF13360_consen 43 SGDGNLYALDAKTGKVLWRFDL-PGPISGAPVV-DGGRVYVGTSDGSLYALDAKTGKVLW 100 (238)
T ss_dssp ETTSEEEEEETTTSEEEEEEEC-SSCGGSGEEE-ETTEEEEEETTSEEEEEETTTSCEEE
T ss_pred cCCCEEEEEECCCCCEEEEeec-cccccceeee-cccccccccceeeeEecccCCcceee
Confidence 4688899999988987766653 2111111122 34444555567799999988876543
No 355
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=89.33 E-value=4.8 Score=27.28 Aligned_cols=80 Identities=15% Similarity=0.152 Sum_probs=47.4
Q ss_pred ceeeeeeecccccEEEEEEcCCCcEEEEE---eCC-CeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEec
Q psy8803 17 IVETEVLTQHTHQVLHVSFSHNGRYFATC---SKD-GYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 17 ~~~~~~~~~~~~~v~~i~~s~~~~~l~s~---~~d-~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 92 (111)
+.....+......+..-.|+|+++.++-. ... ..+.++++..+....... .. .....-+|+|++..++.+.
T Consensus 182 g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~----g~~~~P~fspDG~~l~f~~ 256 (425)
T COG0823 182 GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FN----GNNGAPAFSPDGSKLAFSS 256 (425)
T ss_pred CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cC----CccCCccCCCCCCEEEEEE
Confidence 44444444445567777899998765543 222 358888888765443111 11 1111237899999998887
Q ss_pred cccCCccccCceEEEe
Q psy8803 93 VHFGTPQSTSGEIAVF 108 (111)
Q Consensus 93 ~~~~~~~~~~~~i~iw 108 (111)
..++...||
T Consensus 257 -------~rdg~~~iy 265 (425)
T COG0823 257 -------SRDGSPDIY 265 (425)
T ss_pred -------CCCCCccEE
Confidence 555555555
No 356
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=89.27 E-value=3.5 Score=25.22 Aligned_cols=76 Identities=18% Similarity=0.199 Sum_probs=41.8
Q ss_pred cccEEEEEEcCCCcEE-EEEeCCCeEEEEecCCCce-eeeecceeeeec--CceeeEEEccCCCEEEEeccccCCccccC
Q psy8803 27 THQVLHVSFSHNGRYF-ATCSKDGYILVWTSSYPSK-VKYSHDMKTFSW--KYTQYSQFNESDTLLLVSGVHFGTPQSTS 102 (111)
Q Consensus 27 ~~~v~~i~~s~~~~~l-~s~~~d~~i~iw~~~~~~~-~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 102 (111)
-.....++|+||++.| ++-+..+.|..+++..... ............ ...-.+++..++... ++. -..
T Consensus 133 ~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~-va~-------~~~ 204 (246)
T PF08450_consen 133 LGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLW-VAD-------WGG 204 (246)
T ss_dssp ESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EE-EEE-------ETT
T ss_pred cccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEE-EEE-------cCC
Confidence 4566899999998755 5667778898888853221 111111111111 123456777766544 443 235
Q ss_pred ceEEEeec
Q psy8803 103 GEIAVFSL 110 (111)
Q Consensus 103 ~~i~iw~~ 110 (111)
+.|.++|.
T Consensus 205 ~~I~~~~p 212 (246)
T PF08450_consen 205 GRIVVFDP 212 (246)
T ss_dssp TEEEEEET
T ss_pred CEEEEECC
Confidence 55666653
No 357
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=89.06 E-value=4.9 Score=26.66 Aligned_cols=77 Identities=9% Similarity=0.035 Sum_probs=46.3
Q ss_pred cEEEEEEcCCCcEEEEE-eCC----CeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCc---cc
Q psy8803 29 QVLHVSFSHNGRYFATC-SKD----GYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTP---QS 100 (111)
Q Consensus 29 ~v~~i~~s~~~~~l~s~-~~d----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~ 100 (111)
.+....++|++++++-+ +.. ..++++|+++++.... .+.... ...+.|.+++..++.+..+.... ..
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d--~i~~~~---~~~~~W~~d~~~~~y~~~~~~~~~~~~~ 199 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPD--GIENPK---FSSVSWSDDGKGFFYTRFDEDQRTSDSG 199 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEE--EEEEEE---SEEEEECTTSSEEEEEECSTTTSS-CCG
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCC--cccccc---cceEEEeCCCCEEEEEEeCcccccccCC
Confidence 33467899999987754 333 4599999999865542 122211 12378888888887776444321 12
Q ss_pred cCceEEEeec
Q psy8803 101 TSGEIAVFSL 110 (111)
Q Consensus 101 ~~~~i~iw~~ 110 (111)
....|..|++
T Consensus 200 ~~~~v~~~~~ 209 (414)
T PF02897_consen 200 YPRQVYRHKL 209 (414)
T ss_dssp CCEEEEEEET
T ss_pred CCcEEEEEEC
Confidence 2455666653
No 358
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=88.82 E-value=7.4 Score=28.35 Aligned_cols=74 Identities=12% Similarity=0.241 Sum_probs=43.9
Q ss_pred cEEEEEEcCCCcEEEEEeCCCeEEEEecCC--Cce--ee-eecceeeee------------cCceeeEEEccC---CCEE
Q psy8803 29 QVLHVSFSHNGRYFATCSKDGYILVWTSSY--PSK--VK-YSHDMKTFS------------WKYTQYSQFNES---DTLL 88 (111)
Q Consensus 29 ~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~--~~~--~~-~~~~~~~~~------------~~~~~~v~~~~~---~~~~ 88 (111)
.|..+..+|+|++++-.|..+ +.|..+.. +.. +. -...+.|.. -..+..+.|+|. +.++
T Consensus 86 ~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l 164 (717)
T PF10168_consen 86 EVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHL 164 (717)
T ss_pred eEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeE
Confidence 678889999999999988754 44444421 100 00 000111100 013456788885 4677
Q ss_pred EEeccccCCccccCceEEEeecC
Q psy8803 89 LVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 89 ~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
++. ..|+++++||+.
T Consensus 165 ~vL--------tsdn~lR~y~~~ 179 (717)
T PF10168_consen 165 VVL--------TSDNTLRLYDIS 179 (717)
T ss_pred EEE--------ecCCEEEEEecC
Confidence 665 469999999973
No 359
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=88.50 E-value=4.3 Score=26.68 Aligned_cols=54 Identities=11% Similarity=0.136 Sum_probs=37.7
Q ss_pred eeecCCCCceeeeeeecccccEEEEEEcCCCc-EEEEE-eCCCeEEEEecCCCceee
Q psy8803 9 KRLDYHTPIVETEVLTQHTHQVLHVSFSHNGR-YFATC-SKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 9 i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~-~l~s~-~~d~~i~iw~~~~~~~~~ 63 (111)
|-++|..+++.+.++.. ...+..|..+.|.. +|.+. ..++.+.+||..+++...
T Consensus 271 VWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~ 326 (342)
T PF06433_consen 271 VWVYDLKTHKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVR 326 (342)
T ss_dssp EEEEETTTTEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEE
T ss_pred EEEEECCCCeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEe
Confidence 45566778888888763 34577888999866 44343 457899999999987776
No 360
>KOG1920|consensus
Probab=87.88 E-value=5.2 Score=30.62 Aligned_cols=97 Identities=10% Similarity=0.076 Sum_probs=53.4
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEe---CCCeEEEEecCCCceeeeecceeeeecCceeeEEEcc
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCS---KDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~---~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
..+++||-+ |.+...-+...+.=.+++|-|.|.++++-. .+..|.+|.-+....-...-+. ...-.++..++|+.
T Consensus 222 RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~-p~de~~ve~L~Wns 299 (1265)
T KOG1920|consen 222 RKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPF-PLDEKEVEELAWNS 299 (1265)
T ss_pred eeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCC-cccccchheeeecC
Confidence 678999987 654444444444556889999999998863 3446777755432211110000 00111244567777
Q ss_pred CCCEEEEeccccCCccccCceEEEeec
Q psy8803 84 SDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+...+++-. . ......|.+|-+
T Consensus 300 ~sdiLAv~~-~----~~e~~~v~lwt~ 321 (1265)
T KOG1920|consen 300 NSDILAVVT-S----NLENSLVQLWTT 321 (1265)
T ss_pred CCCceeeee-c----ccccceEEEEEe
Confidence 777665521 0 023344888853
No 361
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=87.87 E-value=5.9 Score=26.09 Aligned_cols=84 Identities=11% Similarity=0.089 Sum_probs=49.9
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEe----------CCCeEEEEecCCCceeee--ecce-eeeec
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCS----------KDGYILVWTSSYPSKVKY--SHDM-KTFSW 73 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~----------~d~~i~iw~~~~~~~~~~--~~~~-~~~~~ 73 (111)
+.+.+.|..+++.+-++. .+....+..+||++.+.++. ....+.+||..+...... ...- +....
T Consensus 17 ~rv~viD~d~~k~lGmi~--~g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~ 94 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMID--TGFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVV 94 (342)
T ss_dssp EEEEEEETTTTEEEEEEE--EESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS
T ss_pred ceEEEEECCCCcEEEEee--cccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheec
Confidence 478888988888877775 34445577899998877642 234688999988654331 0000 11111
Q ss_pred CceeeEEEccCCCEEEEec
Q psy8803 74 KYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 74 ~~~~~v~~~~~~~~~~~~~ 92 (111)
...+..+++.+++.+++..
T Consensus 95 ~~~~~~~ls~dgk~~~V~N 113 (342)
T PF06433_consen 95 PYKNMFALSADGKFLYVQN 113 (342)
T ss_dssp --GGGEEE-TTSSEEEEEE
T ss_pred ccccceEEccCCcEEEEEc
Confidence 2334557777888777654
No 362
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=87.85 E-value=1.9 Score=22.30 Aligned_cols=31 Identities=16% Similarity=0.254 Sum_probs=25.6
Q ss_pred CceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 74 KYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 74 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
...+.++.+|+...+.++. ...+.|+++..+
T Consensus 54 ~~aNGI~~s~~~k~lyVa~-------~~~~~I~vy~~~ 84 (86)
T PF01731_consen 54 SFANGIAISPDKKYLYVAS-------SLAHSIHVYKRH 84 (86)
T ss_pred CCCceEEEcCCCCEEEEEe-------ccCCeEEEEEec
Confidence 4567899999999998887 778889998753
No 363
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=87.34 E-value=2.8 Score=21.83 Aligned_cols=43 Identities=12% Similarity=0.242 Sum_probs=26.1
Q ss_pred EeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEec
Q psy8803 45 CSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 45 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 92 (111)
+..+|++.-||..+.+...- ...+ ...+.|+.++++..++++=
T Consensus 33 ~~~~GRll~ydp~t~~~~vl---~~~L--~fpNGVals~d~~~vlv~E 75 (89)
T PF03088_consen 33 GRPTGRLLRYDPSTKETTVL---LDGL--YFPNGVALSPDESFVLVAE 75 (89)
T ss_dssp T---EEEEEEETTTTEEEEE---EEEE--SSEEEEEE-TTSSEEEEEE
T ss_pred CCCCcCEEEEECCCCeEEEe---hhCC--CccCeEEEcCCCCEEEEEe
Confidence 34457777888877654321 1222 4678999999999888853
No 364
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=87.33 E-value=4.3 Score=26.50 Aligned_cols=49 Identities=6% Similarity=0.045 Sum_probs=30.5
Q ss_pred CCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 48 DGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 48 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.+.+.++|+++......... ....+...|+|++..++..- ++.|.+.++
T Consensus 22 ~~~y~i~d~~~~~~~~l~~~-----~~~~~~~~~sP~g~~~~~v~---------~~nly~~~~ 70 (353)
T PF00930_consen 22 KGDYYIYDIETGEITPLTPP-----PPKLQDAKWSPDGKYIAFVR---------DNNLYLRDL 70 (353)
T ss_dssp EEEEEEEETTTTEEEESS-E-----ETTBSEEEE-SSSTEEEEEE---------TTEEEEESS
T ss_pred ceeEEEEecCCCceEECcCC-----ccccccceeecCCCeeEEEe---------cCceEEEEC
Confidence 35678888888665542111 14556778899998887743 566766653
No 365
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=87.31 E-value=5.9 Score=26.62 Aligned_cols=50 Identities=6% Similarity=0.066 Sum_probs=37.2
Q ss_pred eeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCC
Q psy8803 8 YKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYP 59 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~ 59 (111)
.|+||+.. |+++..+.-..+.+.++.|..+.+++ .-..||.++++|+...
T Consensus 62 ~I~iys~s-G~ll~~i~w~~~~iv~~~wt~~e~Lv-vV~~dG~v~vy~~~G~ 111 (410)
T PF04841_consen 62 SIQIYSSS-GKLLSSIPWDSGRIVGMGWTDDEELV-VVQSDGTVRVYDLFGE 111 (410)
T ss_pred EEEEECCC-CCEeEEEEECCCCEEEEEECCCCeEE-EEEcCCEEEEEeCCCc
Confidence 58888877 66666665444899999998855554 5557999999998643
No 366
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=87.26 E-value=6 Score=25.55 Aligned_cols=59 Identities=17% Similarity=0.336 Sum_probs=31.9
Q ss_pred cccEEEEEEcCCCcEEEEEeCCCeEEEEecCC-CceeeeecceeeeecCceeeEEEccCCCEEEE
Q psy8803 27 THQVLHVSFSHNGRYFATCSKDGYILVWTSSY-PSKVKYSHDMKTFSWKYTQYSQFNESDTLLLV 90 (111)
Q Consensus 27 ~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 90 (111)
.+.+..+.-++||++++.+.......-|+.-. ....+ .... -..++.+.|.|++...++
T Consensus 144 ~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~-~r~~----~~riq~~gf~~~~~lw~~ 203 (302)
T PF14870_consen 144 SGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPH-NRNS----SRRIQSMGFSPDGNLWML 203 (302)
T ss_dssp ---EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEE-E--S----SS-EEEEEE-TTS-EEEE
T ss_pred cceeEeEEECCCCcEEEEECcccEEEEecCCCccceEE-ccCc----cceehhceecCCCCEEEE
Confidence 45677888889999998887776777887643 23332 1111 146778899998776555
No 367
>KOG1916|consensus
Probab=86.69 E-value=0.61 Score=34.37 Aligned_cols=53 Identities=21% Similarity=0.223 Sum_probs=34.5
Q ss_pred cccCeeeecCCCCceeeeeeecccccEEE-----------EEEcCCCcEEEEEeCCCeEEEEecC
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQHTHQVLH-----------VSFSHNGRYFATCSKDGYILVWTSS 57 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~-----------i~~s~~~~~l~s~~~d~~i~iw~~~ 57 (111)
..++.+++..+..-. ...+.+|...+.. -..||||..++.++.||.++.|.+.
T Consensus 202 ~~~~~i~lL~~~ra~-~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiy 265 (1283)
T KOG1916|consen 202 LKGGEIRLLNINRAL-RSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIY 265 (1283)
T ss_pred cCCCceeEeeechHH-HHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeee
Confidence 456677776665322 2333445433332 2379999999999999999998864
No 368
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=86.49 E-value=1.4 Score=17.39 Aligned_cols=25 Identities=16% Similarity=0.260 Sum_probs=18.2
Q ss_pred EEEEEEcCCCcEEEEEeCCCeEEEE
Q psy8803 30 VLHVSFSHNGRYFATCSKDGYILVW 54 (111)
Q Consensus 30 v~~i~~s~~~~~l~s~~~d~~i~iw 54 (111)
...++.+++|+++++=..+.+|.++
T Consensus 4 P~gvav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 4 PHGVAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred CcEEEEeCCCCEEEEECCCCEEEEC
Confidence 3567777888888887777777654
No 369
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=86.35 E-value=1.7 Score=18.31 Aligned_cols=29 Identities=17% Similarity=0.315 Sum_probs=17.7
Q ss_pred ccccEEEEEEcCCCcEEEEEe-CC--CeEEEE
Q psy8803 26 HTHQVLHVSFSHNGRYFATCS-KD--GYILVW 54 (111)
Q Consensus 26 ~~~~v~~i~~s~~~~~l~s~~-~d--~~i~iw 54 (111)
....-....|+|||+.|+-.+ .+ +...||
T Consensus 7 ~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 7 SPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 344567789999997665544 44 555554
No 370
>KOG3621|consensus
Probab=86.17 E-value=2.4 Score=30.29 Aligned_cols=57 Identities=11% Similarity=0.041 Sum_probs=40.7
Q ss_pred cccccCeeeecCCCCcee-----eeee-ecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 2 KSWYEEYKRLDYHTPIVE-----TEVL-TQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~-----~~~~-~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
.+.-.|.|.++-+....+ +..+ ..|...|.++.|++++..+.+|...|++..-.+..
T Consensus 93 agt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 93 AGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred hhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 345566777777764311 1111 13678899999999999999999999988776655
No 371
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=85.64 E-value=9.3 Score=26.18 Aligned_cols=100 Identities=15% Similarity=0.188 Sum_probs=52.5
Q ss_pred ccCeeeecCCCCceeeeeeec-cc-ccEEEEEEcCC--C-cEEEEEeCCCeEEEEec-CCC-ceeeeecceeee---ec-
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQ-HT-HQVLHVSFSHN--G-RYFATCSKDGYILVWTS-SYP-SKVKYSHDMKTF---SW- 73 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~-~~-~~v~~i~~s~~--~-~~l~s~~~d~~i~iw~~-~~~-~~~~~~~~~~~~---~~- 73 (111)
+-.++.+||....+.++.+.- -+ .....+.|.++ . .-++.+....+|-.|-- +.+ ........+... .|
T Consensus 220 yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~ 299 (461)
T PF05694_consen 220 YGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWI 299 (461)
T ss_dssp S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS-
T ss_pred ccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCccc
Confidence 557899999999998888752 22 34667888664 3 34666655555555533 222 111100011100 01
Q ss_pred ------------CceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 74 ------------KYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 74 ------------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
..++.+..+.++..|.+++ =..|.|+.||+.
T Consensus 300 lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~-------W~~GdvrqYDIS 342 (461)
T PF05694_consen 300 LPEMLKPFGAVPPLITDILISLDDRFLYVSN-------WLHGDVRQYDIS 342 (461)
T ss_dssp --GGGGGG-EE------EEE-TTS-EEEEEE-------TTTTEEEEEE-S
T ss_pred ccccccccccCCCceEeEEEccCCCEEEEEc-------ccCCcEEEEecC
Confidence 2356778899999999987 678889999973
No 372
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=85.55 E-value=8.8 Score=25.80 Aligned_cols=44 Identities=16% Similarity=0.147 Sum_probs=31.3
Q ss_pred eeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee
Q psy8803 19 ETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 19 ~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~ 63 (111)
+..-+....+.|.+++.| |--.++.|.++|.+.|.|+|.+....
T Consensus 78 P~~l~~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~ 121 (395)
T PF08596_consen 78 PLTLLDAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIY 121 (395)
T ss_dssp EEEEE---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEE
T ss_pred chhheeccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEe
Confidence 344444568999999996 56678889999999999999876554
No 373
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=83.24 E-value=8.6 Score=23.86 Aligned_cols=59 Identities=25% Similarity=0.305 Sum_probs=34.6
Q ss_pred CCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 37 HNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 37 ~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
..++.|+.|.++| +.+++......... +. ...++..+...|+-+.+++.. |+.+.++++
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~---i~--~~~~I~ql~vl~~~~~llvLs---------d~~l~~~~L 63 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTR---IL--KLSSITQLSVLPELNLLLVLS---------DGQLYVYDL 63 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCcccee---Ee--ecceEEEEEEecccCEEEEEc---------CCccEEEEc
Confidence 3477888888888 88888832211110 10 011244555566666777754 577888876
No 374
>KOG2114|consensus
Probab=82.66 E-value=13 Score=27.70 Aligned_cols=53 Identities=8% Similarity=0.111 Sum_probs=29.6
Q ss_pred cccCeeeecCCCCceeeeeeeccccc-EEEEEEcCC-CcEEEEEeCCC-----eEEEEecCC
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQHTHQ-VLHVSFSHN-GRYFATCSKDG-----YILVWTSSY 58 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~~~~-v~~i~~s~~-~~~l~s~~~d~-----~i~iw~~~~ 58 (111)
..||.|.+.+-. -+.++.|+.+... |..+ +.-+ ...|++-++|. .+++|+++.
T Consensus 42 t~~G~V~~Ln~s-~~~~~~fqa~~~siv~~L-~~~~~~~~L~sv~Ed~~~np~llkiw~lek 101 (933)
T KOG2114|consen 42 TADGRVVILNSS-FQLIRGFQAYEQSIVQFL-YILNKQNFLFSVGEDEQGNPVLLKIWDLEK 101 (933)
T ss_pred eccccEEEeccc-ceeeehheecchhhhhHh-hcccCceEEEEEeecCCCCceEEEEecccc
Confidence 344444444322 2334566666655 3333 3334 46777777654 489999864
No 375
>KOG3630|consensus
Probab=82.44 E-value=7.6 Score=29.85 Aligned_cols=56 Identities=13% Similarity=0.111 Sum_probs=37.1
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
..-|+.|++..+........-..-.....+++|+|.|..++.|-.+|++.-|-...
T Consensus 174 ~l~dlsl~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~l 229 (1405)
T KOG3630|consen 174 DLSDLSLRVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSL 229 (1405)
T ss_pred hccccchhhhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeeccc
Confidence 34455555555543322211112456789999999999999999999998886543
No 376
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=80.48 E-value=19 Score=25.96 Aligned_cols=64 Identities=11% Similarity=0.177 Sum_probs=36.8
Q ss_pred EEEEEcCCCcEEEEEeCCCeEEEEecCCCceee-----eecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceE
Q psy8803 31 LHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK-----YSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEI 105 (111)
Q Consensus 31 ~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i 105 (111)
.-+.-+.-+..-+.-+....+.|||.+...... ....+..++|. +.|++..+++.| ..+.|
T Consensus 33 ~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWt------st~d~qsiLaVG--------f~~~v 98 (631)
T PF12234_consen 33 SLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWT------STPDGQSILAVG--------FPHHV 98 (631)
T ss_pred ceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceee------ecCCCCEEEEEE--------cCcEE
Confidence 333344434433333345579999998765433 24456677775 466777777765 45556
Q ss_pred EEe
Q psy8803 106 AVF 108 (111)
Q Consensus 106 ~iw 108 (111)
.++
T Consensus 99 ~l~ 101 (631)
T PF12234_consen 99 LLY 101 (631)
T ss_pred EEE
Confidence 555
No 377
>KOG2377|consensus
Probab=80.17 E-value=17 Score=25.38 Aligned_cols=33 Identities=9% Similarity=0.074 Sum_probs=29.4
Q ss_pred ccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 26 HTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 26 ~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
..+.|..+.||+|.+.|+..-.++.+.+++...
T Consensus 65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~ 97 (657)
T KOG2377|consen 65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIP 97 (657)
T ss_pred CCCceeEEEeccCcceEEEEecCceEEEEecCC
Confidence 457999999999999999999999999998843
No 378
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=80.05 E-value=15 Score=24.45 Aligned_cols=92 Identities=7% Similarity=0.032 Sum_probs=57.6
Q ss_pred cCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeC---CCeEEEEecCCCceeeeecceeeeecCceeeEEEc
Q psy8803 6 EEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSK---DGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFN 82 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 82 (111)
+..|.+.|........... -...-..+.+++++..+..+.. +.++.+.|..+...... +.... .| ..+++.
T Consensus 95 ~~~v~vid~~~~~~~~~~~-vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~---~~vG~-~P-~~~a~~ 168 (381)
T COG3391 95 SNTVSVIDTATNTVLGSIP-VGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTAT---IPVGN-TP-TGVAVD 168 (381)
T ss_pred CCeEEEEcCcccceeeEee-eccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEE---EecCC-Cc-ceEEEC
Confidence 4566677755444433332 1125567899998865444433 67888888877665552 11111 23 678999
Q ss_pred cCCCEEEEeccccCCccccCceEEEeec
Q psy8803 83 ESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
|++..+.++. ..++.|.+.|.
T Consensus 169 p~g~~vyv~~-------~~~~~v~vi~~ 189 (381)
T COG3391 169 PDGNKVYVTN-------SDDNTVSVIDT 189 (381)
T ss_pred CCCCeEEEEe-------cCCCeEEEEeC
Confidence 9999887766 56777877764
No 379
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=79.13 E-value=14 Score=23.53 Aligned_cols=55 Identities=5% Similarity=0.068 Sum_probs=36.8
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCc
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPS 60 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~ 60 (111)
++.++...+||..+-+.+..+. ..+.=+.++ .|++.|.......++..+|..+..
T Consensus 106 TWk~~~~f~yd~~tl~~~~~~~-y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~ 160 (264)
T PF05096_consen 106 TWKEGTGFVYDPNTLKKIGTFP-YPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFK 160 (264)
T ss_dssp ESSSSEEEEEETTTTEEEEEEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-S
T ss_pred EecCCeEEEEccccceEEEEEe-cCCcceEEE--cCCCEEEEECCccceEEECCcccc
Confidence 5678889999999888888775 445667776 466666666556789999987643
No 380
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=78.59 E-value=5.4 Score=27.97 Aligned_cols=56 Identities=16% Similarity=0.172 Sum_probs=42.9
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecC
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSS 57 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~ 57 (111)
|.++.-|-|++||-........+.+-...|..+....+|.++++.+.. .+.+-|++
T Consensus 577 a~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL~d~~ 632 (776)
T COG5167 577 AAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKN-YLLLTDVP 632 (776)
T ss_pred EEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecc-eEEEEecc
Confidence 345677889999987555566667777889999999999988777754 67777775
No 381
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=77.91 E-value=16 Score=23.50 Aligned_cols=93 Identities=8% Similarity=0.047 Sum_probs=47.1
Q ss_pred ccCeeeecCCCCce-eeeeee-cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC-CceeeeecceeeeecCceeeEEE
Q psy8803 5 YEEYKRLDYHTPIV-ETEVLT-QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY-PSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 5 ~d~~i~iw~~~~~~-~~~~~~-~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
..+.+.+|++...+ ....-. .....+.++. ..++.++.|..-+.+.++..+. ...+.... +......+.++.|
T Consensus 105 ~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~--~~~~~I~vgD~~~sv~~~~~~~~~~~l~~va--~d~~~~~v~~~~~ 180 (321)
T PF03178_consen 105 VGNKLYVYDLDNSKTLLKKAFYDSPFYITSLS--VFKNYILVGDAMKSVSLLRYDEENNKLILVA--RDYQPRWVTAAEF 180 (321)
T ss_dssp ETTEEEEEEEETTSSEEEEEEE-BSSSEEEEE--EETTEEEEEESSSSEEEEEEETTTE-EEEEE--EESS-BEEEEEEE
T ss_pred ecCEEEEEEccCcccchhhheecceEEEEEEe--ccccEEEEEEcccCEEEEEEEccCCEEEEEE--ecCCCccEEEEEE
Confidence 34678888887665 322222 1222444443 3477888888878888775543 22122100 1111123455666
Q ss_pred ccCCCEEEEeccccCCccccCceEEEee
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
-+++..+ ..+ ..++.+.++.
T Consensus 181 l~d~~~~-i~~-------D~~gnl~~l~ 200 (321)
T PF03178_consen 181 LVDEDTI-IVG-------DKDGNLFVLR 200 (321)
T ss_dssp E-SSSEE-EEE-------ETTSEEEEEE
T ss_pred ecCCcEE-EEE-------cCCCeEEEEE
Confidence 6555544 333 5666677664
No 382
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=75.36 E-value=20 Score=23.39 Aligned_cols=54 Identities=17% Similarity=0.060 Sum_probs=32.8
Q ss_pred cEEEEEEcCCCcEEEEEeCCCeEEEEecCCCce---eeeecceeeeecCceeeEEEccC
Q psy8803 29 QVLHVSFSHNGRYFATCSKDGYILVWTSSYPSK---VKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 29 ~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
.-..|+|.||+++|++-- .+.|.+++ ..+.. +.....+..........++++|+
T Consensus 3 ~P~~~a~~pdG~l~v~e~-~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~ 59 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVAER-SGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPD 59 (331)
T ss_dssp SEEEEEEETTSCEEEEET-TTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TT
T ss_pred CceEEEEeCCCcEEEEeC-CceEEEEe-CCCcCcceecccccccccccCCcccceeccc
Confidence 347899999999888654 89999998 33322 12222332222234567889984
No 383
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=74.49 E-value=5.6 Score=16.70 Aligned_cols=9 Identities=22% Similarity=0.390 Sum_probs=4.6
Q ss_pred cCceEEEee
Q psy8803 101 TSGEIAVFS 109 (111)
Q Consensus 101 ~~~~i~iw~ 109 (111)
.++.|.++|
T Consensus 12 ~~~~v~~id 20 (42)
T TIGR02276 12 GSNTVSVID 20 (42)
T ss_pred CCCEEEEEE
Confidence 344555555
No 384
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=74.48 E-value=24 Score=23.85 Aligned_cols=87 Identities=10% Similarity=0.052 Sum_probs=40.8
Q ss_pred cCeeeecCCCCceeeeeeecccccEEEEEEc-----CCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 6 EEYKRLDYHTPIVETEVLTQHTHQVLHVSFS-----HNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s-----~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
+..+|++.....+..++.....-.+..+.+- ..+..|++-..+|.++++.+...+.+....-.............
T Consensus 234 e~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ss 313 (395)
T PF08596_consen 234 ESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSSS 313 (395)
T ss_dssp SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-E
T ss_pred ccceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCccccccccccE
Confidence 4566777766555444333222233334442 24667888889999999999886655422111111112233456
Q ss_pred EccCCCEEEEec
Q psy8803 81 FNESDTLLLVSG 92 (111)
Q Consensus 81 ~~~~~~~~~~~~ 92 (111)
+.+++..+..++
T Consensus 314 is~~Gdi~~~~g 325 (395)
T PF08596_consen 314 ISRNGDIFYWTG 325 (395)
T ss_dssp E-TTS-EEEE-S
T ss_pred ECCCCCEEEEeC
Confidence 677777665544
No 385
>KOG4499|consensus
Probab=73.42 E-value=7.9 Score=24.41 Aligned_cols=34 Identities=12% Similarity=-0.074 Sum_probs=29.1
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEc
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFS 36 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s 36 (111)
.++-++|...|..+|+.+..++-.+..+.+++|-
T Consensus 229 ~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFg 262 (310)
T KOG4499|consen 229 TFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFG 262 (310)
T ss_pred EecCcEEEEECCCCCcEEEEEEcCCCceEEEEec
Confidence 4566789999999999998888888999999994
No 386
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=72.40 E-value=14 Score=20.23 Aligned_cols=53 Identities=17% Similarity=0.028 Sum_probs=35.0
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
+++.|..||+|+-. +.+..+.. .+.|..+.-... ..|+-+..+|+|-+|+-..
T Consensus 20 vGs~D~~IRvf~~~--e~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~ 72 (111)
T PF14783_consen 20 VGSDDFEIRVFKGD--EIVAEITE-TDKVTSLCSLGG-GRFAYALANGTVGVYDRSQ 72 (111)
T ss_pred EecCCcEEEEEeCC--cEEEEEec-ccceEEEEEcCC-CEEEEEecCCEEEEEeCcc
Confidence 46778888888744 33444442 345666655443 6688899999999997643
No 387
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=70.76 E-value=32 Score=23.79 Aligned_cols=59 Identities=7% Similarity=-0.064 Sum_probs=36.8
Q ss_pred cccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCcee--eeeccee-eeecCceeeEEEccCC
Q psy8803 27 THQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKV--KYSHDMK-TFSWKYTQYSQFNESD 85 (111)
Q Consensus 27 ~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~--~~~~~~~-~~~~~~~~~v~~~~~~ 85 (111)
-..-+.|+|.||+++|++--..++|++++....... .....+. .........++++|+-
T Consensus 29 L~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 29 LNKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred CCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence 346689999999999988765689998876543221 1111111 1112345678999874
No 388
>PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C ....
Probab=70.53 E-value=0.98 Score=17.24 Aligned_cols=7 Identities=57% Similarity=1.028 Sum_probs=4.6
Q ss_pred EcCCCcE
Q psy8803 35 FSHNGRY 41 (111)
Q Consensus 35 ~s~~~~~ 41 (111)
|||+|++
T Consensus 8 FSp~Grl 14 (23)
T PF10584_consen 8 FSPDGRL 14 (23)
T ss_dssp BBTTSSB
T ss_pred ECCCCeE
Confidence 6777664
No 389
>COG2133 Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]
Probab=70.49 E-value=28 Score=23.65 Aligned_cols=64 Identities=13% Similarity=0.177 Sum_probs=36.0
Q ss_pred ccEEEEEEcCCCcEEEEEeCCCeE-----------EEEecCCCceee-----eecceeeeecCceeeEEEccCCCEEEEe
Q psy8803 28 HQVLHVSFSHNGRYFATCSKDGYI-----------LVWTSSYPSKVK-----YSHDMKTFSWKYTQYSQFNESDTLLLVS 91 (111)
Q Consensus 28 ~~v~~i~~s~~~~~l~s~~~d~~i-----------~iw~~~~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 91 (111)
+.-..+.|+||+.++++.++.... +++.++..-... ...++.....-..+.++|+|....|.++
T Consensus 177 H~g~~l~f~pDG~Lyvs~G~~~~~~~aq~~~~~~Gk~~r~~~a~~~~~d~p~~~~~i~s~G~RN~qGl~w~P~tg~Lw~~ 256 (399)
T COG2133 177 HFGGRLVFGPDGKLYVTTGSNGDPALAQDNVSLAGKVLRIDRAGIIPADNPFPNSEIWSYGHRNPQGLAWHPVTGALWTT 256 (399)
T ss_pred cCcccEEECCCCcEEEEeCCCCCcccccCccccccceeeeccCcccccCCCCCCcceEEeccCCccceeecCCCCcEEEE
Confidence 566789999999999887765111 122221110000 1123444444456788999986665554
No 390
>KOG4460|consensus
Probab=67.90 E-value=42 Score=24.01 Aligned_cols=27 Identities=22% Similarity=0.263 Sum_probs=21.8
Q ss_pred cEEEEEEcCCCcEEEEEeCCCeEEEEe
Q psy8803 29 QVLHVSFSHNGRYFATCSKDGYILVWT 55 (111)
Q Consensus 29 ~v~~i~~s~~~~~l~s~~~d~~i~iw~ 55 (111)
.|..+..++.|..++-.|.+|.+.+.-
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMeL 131 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVMEL 131 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEEc
Confidence 577888899999998888888776554
No 391
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=67.21 E-value=36 Score=23.02 Aligned_cols=31 Identities=23% Similarity=0.535 Sum_probs=26.8
Q ss_pred ccEEEEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 28 HQVLHVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 28 ~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
+.+..|+.||+++.+|.-..++.+.+.....
T Consensus 217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf 247 (410)
T PF04841_consen 217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDF 247 (410)
T ss_pred CCeEEEEECCCCCEEEEEECCCCEEEEECcc
Confidence 5799999999999999998889988887654
No 392
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=66.66 E-value=32 Score=22.13 Aligned_cols=89 Identities=19% Similarity=0.188 Sum_probs=46.4
Q ss_pred CeeeecCCCCceeeeeeec-ccccEEEE---EEcCC----CcEEEEEeC---------C-CeEEEEecCCC----ceee-
Q psy8803 7 EYKRLDYHTPIVETEVLTQ-HTHQVLHV---SFSHN----GRYFATCSK---------D-GYILVWTSSYP----SKVK- 63 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~-~~~~v~~i---~~s~~----~~~l~s~~~---------d-~~i~iw~~~~~----~~~~- 63 (111)
..|++.|..+.+.+..+.- ....+.++ .+..+ ..+|+.|.. . |++.++++... ....
T Consensus 2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~ 81 (321)
T PF03178_consen 2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL 81 (321)
T ss_dssp -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence 3578888877765555432 22334443 34332 456665532 2 88999999873 1222
Q ss_pred -eecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 64 -YSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 64 -~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+...+ . .++.+++.- +..++++ .++.|.+|++
T Consensus 82 i~~~~~---~-g~V~ai~~~--~~~lv~~---------~g~~l~v~~l 114 (321)
T PF03178_consen 82 IHSTEV---K-GPVTAICSF--NGRLVVA---------VGNKLYVYDL 114 (321)
T ss_dssp EEEEEE---S-S-EEEEEEE--TTEEEEE---------ETTEEEEEEE
T ss_pred EEEEee---c-CcceEhhhh--CCEEEEe---------ecCEEEEEEc
Confidence 21122 1 345555333 3345553 3577888876
No 393
>PRK10115 protease 2; Provisional
Probab=66.26 E-value=49 Score=24.18 Aligned_cols=59 Identities=3% Similarity=-0.107 Sum_probs=36.2
Q ss_pred cEEEEEEcCCCcEEEEEe-----CCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEecc
Q psy8803 29 QVLHVSFSHNGRYFATCS-----KDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGV 93 (111)
Q Consensus 29 ~v~~i~~s~~~~~l~s~~-----~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 93 (111)
.+..+.++||+++|+-+. +...|++.|+.++..+.. .+.... ..++|.+++..++.+..
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~--~i~~~~----~~~~w~~D~~~~~y~~~ 191 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPE--LLDNVE----PSFVWANDSWTFYYVRK 191 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCc--cccCcc----eEEEEeeCCCEEEEEEe
Confidence 456778999999877653 233577888876542221 111111 24778888887777654
No 394
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=65.76 E-value=37 Score=22.63 Aligned_cols=85 Identities=13% Similarity=-0.008 Sum_probs=52.0
Q ss_pred cCeeeecCCCCceeeeeeecccccEEEEEEcCCCc-EEEEEeCCCeEEEEecCCCceeeeecce-eeeecCceeeEEEcc
Q psy8803 6 EEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGR-YFATCSKDGYILVWTSSYPSKVKYSHDM-KTFSWKYTQYSQFNE 83 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~ 83 (111)
++++.+.|..+++.......-... ..+.++|++. .+++-..+..+.+.|........ .... ..........+++.|
T Consensus 139 ~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~-~~~~~~~~~~~~P~~i~v~~ 216 (381)
T COG3391 139 NNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR-GSVGSLVGVGTGPAGIAVDP 216 (381)
T ss_pred CceEEEEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceec-cccccccccCCCCceEEECC
Confidence 567777777777666654322223 7899999988 45555578899999977654442 1100 011112345678888
Q ss_pred CCCEEEEec
Q psy8803 84 SDTLLLVSG 92 (111)
Q Consensus 84 ~~~~~~~~~ 92 (111)
++..+.+..
T Consensus 217 ~g~~~yV~~ 225 (381)
T COG3391 217 DGNRVYVAN 225 (381)
T ss_pred CCCEEEEEe
Confidence 888666654
No 395
>PRK13616 lipoprotein LpqB; Provisional
Probab=65.60 E-value=48 Score=23.82 Aligned_cols=63 Identities=6% Similarity=-0.065 Sum_probs=32.4
Q ss_pred cEEEEEEcCCCcEEEEEeCC-CeEEEEecCC-Cceee---eeccee-eeecCceeeEEEccCCCEEEEec
Q psy8803 29 QVLHVSFSHNGRYFATCSKD-GYILVWTSSY-PSKVK---YSHDMK-TFSWKYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 29 ~v~~i~~s~~~~~l~s~~~d-~~i~iw~~~~-~~~~~---~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~ 92 (111)
....-.|+|||..+.+.... ...++.+-.. .+... ...... ... ..+..++++|++..+++..
T Consensus 398 ~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~~~~-g~Issl~wSpDG~RiA~i~ 466 (591)
T PRK13616 398 SLTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVASRVP-GPISELQLSRDGVRAAMII 466 (591)
T ss_pred CCCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhhccC-CCcCeEEECCCCCEEEEEE
Confidence 36778999998877776533 2222222211 11110 000111 111 2456778888988887754
No 396
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=65.29 E-value=43 Score=23.20 Aligned_cols=65 Identities=15% Similarity=0.162 Sum_probs=31.3
Q ss_pred cccEEEEEEcCCCcE-EEEEeCCCeEEEEecCCCceeeeeccee----------------eeecCceeeEEEccCCCEEE
Q psy8803 27 THQVLHVSFSHNGRY-FATCSKDGYILVWTSSYPSKVKYSHDMK----------------TFSWKYTQYSQFNESDTLLL 89 (111)
Q Consensus 27 ~~~v~~i~~s~~~~~-l~s~~~d~~i~iw~~~~~~~~~~~~~~~----------------~~~~~~~~~v~~~~~~~~~~ 89 (111)
...+..|..|.|.++ .+++=..|.++.||+......+....+. .+. ...|-+..+.++..+.
T Consensus 311 P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~-GgPqMvqlS~DGkRlY 389 (461)
T PF05694_consen 311 PPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLR-GGPQMVQLSLDGKRLY 389 (461)
T ss_dssp ------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS-------S----EEE-TTSSEEE
T ss_pred CCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccC-CCCCeEEEccCCeEEE
Confidence 456889999998775 4555578999999998753332211111 111 2346678888888887
Q ss_pred Eec
Q psy8803 90 VSG 92 (111)
Q Consensus 90 ~~~ 92 (111)
++.
T Consensus 390 vTn 392 (461)
T PF05694_consen 390 VTN 392 (461)
T ss_dssp EE-
T ss_pred EEe
Confidence 764
No 397
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=64.89 E-value=22 Score=23.11 Aligned_cols=41 Identities=12% Similarity=0.090 Sum_probs=25.8
Q ss_pred ceeeeeeecccccEEEEEEcCCCcEEEEE-eCCCeEEEEecC
Q psy8803 17 IVETEVLTQHTHQVLHVSFSHNGRYFATC-SKDGYILVWTSS 57 (111)
Q Consensus 17 ~~~~~~~~~~~~~v~~i~~s~~~~~l~s~-~~d~~i~iw~~~ 57 (111)
+..+..+..+-..-..++||||++.+..+ +..+.|.-+++.
T Consensus 152 g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d 193 (307)
T COG3386 152 GGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLD 193 (307)
T ss_pred CCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecC
Confidence 33333334444555789999998655444 555778877765
No 398
>KOG2280|consensus
Probab=64.62 E-value=56 Score=24.31 Aligned_cols=50 Identities=14% Similarity=0.125 Sum_probs=35.5
Q ss_pred eeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCC
Q psy8803 8 YKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYP 59 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~ 59 (111)
.|+|+++. |+.+.++....+.+..+.|+.+..+| +-..+|+++++++...
T Consensus 65 ~I~If~~s-G~lL~~~~w~~~~lI~mgWs~~eeLI-~v~k~g~v~Vy~~~ge 114 (829)
T KOG2280|consen 65 YIRIFNIS-GQLLGRILWKHGELIGMGWSDDEELI-CVQKDGTVHVYGLLGE 114 (829)
T ss_pred eEEEEecc-ccchHHHHhcCCCeeeecccCCceEE-EEeccceEEEeecchh
Confidence 46676666 66666555445588899998765554 5667899999998653
No 399
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=62.65 E-value=36 Score=22.62 Aligned_cols=13 Identities=15% Similarity=-0.087 Sum_probs=5.2
Q ss_pred cCeeeecCCCCce
Q psy8803 6 EEYKRLDYHTPIV 18 (111)
Q Consensus 6 d~~i~iw~~~~~~ 18 (111)
||.+...|..+|+
T Consensus 344 ~G~l~~ld~~tG~ 356 (394)
T PRK11138 344 EGYLHWINREDGR 356 (394)
T ss_pred CCEEEEEECCCCC
Confidence 3344444444443
No 400
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=62.40 E-value=18 Score=23.53 Aligned_cols=29 Identities=17% Similarity=0.272 Sum_probs=20.0
Q ss_pred ceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 75 YTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
..|.++|+|++..+.++= +..+.|.-+++
T Consensus 164 ~~NGla~SpDg~tly~aD-------T~~~~i~r~~~ 192 (307)
T COG3386 164 IPNGLAFSPDGKTLYVAD-------TPANRIHRYDL 192 (307)
T ss_pred ecCceEECCCCCEEEEEe-------CCCCeEEEEec
Confidence 347899999998887765 44455655543
No 401
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=62.21 E-value=32 Score=25.29 Aligned_cols=34 Identities=12% Similarity=0.198 Sum_probs=28.0
Q ss_pred ccccEEEEEEcCC---CcEEEEEeCCCeEEEEecCCC
Q psy8803 26 HTHQVLHVSFSHN---GRYFATCSKDGYILVWTSSYP 59 (111)
Q Consensus 26 ~~~~v~~i~~s~~---~~~l~s~~~d~~i~iw~~~~~ 59 (111)
+...|..+.|+|. +.+|+.=..|.++++||+...
T Consensus 145 ~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 145 SSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred CCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCC
Confidence 3568899999996 578888888999999999753
No 402
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=61.99 E-value=41 Score=21.87 Aligned_cols=63 Identities=13% Similarity=0.125 Sum_probs=31.7
Q ss_pred ccccEEEEEEcCCCcEEEEEeCCCeEEEEecC-CCceee-eecceeeeecCceeeEEEccCCCEEEE
Q psy8803 26 HTHQVLHVSFSHNGRYFATCSKDGYILVWTSS-YPSKVK-YSHDMKTFSWKYTQYSQFNESDTLLLV 90 (111)
Q Consensus 26 ~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~-~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~ 90 (111)
....|..|.|.|++.+.+.+ ..+.++.=+.. ....-. ...++.... -.+..+++.++....++
T Consensus 185 ~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~~~-~~~ld~a~~~~~~~wa~ 249 (302)
T PF14870_consen 185 SSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPIKTNG-YGILDLAYRPPNEIWAV 249 (302)
T ss_dssp SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TTSS---S-EEEEEESSSS-EEEE
T ss_pred ccceehhceecCCCCEEEEe-CCcEEEEccCCCCccccccccCCcccCc-eeeEEEEecCCCCEEEE
Confidence 35789999999998876655 67788777622 111111 111221111 12456788877655544
No 403
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=61.44 E-value=12 Score=15.71 Aligned_cols=21 Identities=14% Similarity=0.196 Sum_probs=14.5
Q ss_pred CCcEEEEEeCCCeEEEEecCC
Q psy8803 38 NGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 38 ~~~~l~s~~~d~~i~iw~~~~ 58 (111)
.+..+..++.|+.+..+|.++
T Consensus 20 ~~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 20 AGGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp CTSEEEEE-TTSEEEEEETT-
T ss_pred ECCEEEEEcCCCEEEEEeCCC
Confidence 355677777799999988753
No 404
>TIGR02608 delta_60_rpt delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.
Probab=61.10 E-value=17 Score=17.10 Aligned_cols=18 Identities=11% Similarity=0.279 Sum_probs=14.9
Q ss_pred cEEEEEEcCCCcEEEEEe
Q psy8803 29 QVLHVSFSHNGRYFATCS 46 (111)
Q Consensus 29 ~v~~i~~s~~~~~l~s~~ 46 (111)
.+..+...|||++++.+.
T Consensus 2 ~~~~~~~q~DGkIlv~G~ 19 (55)
T TIGR02608 2 RAYAVAVQSDGKILVAGY 19 (55)
T ss_pred ceEEEEECCCCcEEEEEE
Confidence 457788899999998885
No 405
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=60.69 E-value=7.5 Score=27.02 Aligned_cols=20 Identities=5% Similarity=-0.247 Sum_probs=16.3
Q ss_pred cccCeeeecCCCCceeeeee
Q psy8803 4 WYEEYKRLDYHTPIVETEVL 23 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~ 23 (111)
+-|+++|+||+.+++++...
T Consensus 237 ~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 237 SRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp ETTSEEEEEETTTTCEEEEE
T ss_pred eCCCeEEEEECCCCeEEEEe
Confidence 46999999999999885543
No 406
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=58.83 E-value=12 Score=14.71 Aligned_cols=21 Identities=14% Similarity=0.061 Sum_probs=14.9
Q ss_pred EEEEEeCCCeEEEEecCCCce
Q psy8803 41 YFATCSKDGYILVWTSSYPSK 61 (111)
Q Consensus 41 ~l~s~~~d~~i~iw~~~~~~~ 61 (111)
.+..++.++.+..+|.++++.
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~ 28 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEI 28 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcE
Confidence 455666788888888876654
No 407
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=58.53 E-value=41 Score=20.77 Aligned_cols=63 Identities=8% Similarity=0.018 Sum_probs=34.8
Q ss_pred cEEEEEeCCCeEEEEecCCCce-eeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEe
Q psy8803 40 RYFATCSKDGYILVWTSSYPSK-VKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVF 108 (111)
Q Consensus 40 ~~l~s~~~d~~i~iw~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw 108 (111)
+.|..+...++|.+|++..... ... ....+ +.+..++++..+.++++.=..... +....+|+|
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~--~F~Tv--~~V~~l~y~~~GDYlvTlE~k~~~--~~~~fvR~Y 92 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLC--TFSTV--GRVLQLVYSEAGDYLVTLEEKNKR--SPVDFVRAY 92 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeE--EEcch--hheeEEEeccccceEEEEEeecCC--ccceEEEEE
Confidence 3333334567899999983222 211 12222 455677888888888776433333 323356654
No 408
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=58.45 E-value=51 Score=21.81 Aligned_cols=18 Identities=22% Similarity=0.479 Sum_probs=14.9
Q ss_pred ccEEEEEEcCCCcEEEEE
Q psy8803 28 HQVLHVSFSHNGRYFATC 45 (111)
Q Consensus 28 ~~v~~i~~s~~~~~l~s~ 45 (111)
.....|+|.++|+++++-
T Consensus 14 ~~P~~ia~d~~G~l~V~e 31 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAE 31 (367)
T ss_pred CCCceeeECCCCCEEEEe
Confidence 456789999999998885
No 409
>KOG3616|consensus
Probab=56.17 E-value=45 Score=25.16 Aligned_cols=33 Identities=15% Similarity=0.230 Sum_probs=27.8
Q ss_pred cccEEEEEEcCCCcEEEEEeCCCeEEEEecCCC
Q psy8803 27 THQVLHVSFSHNGRYFATCSKDGYILVWTSSYP 59 (111)
Q Consensus 27 ~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~ 59 (111)
...+..+.-+|.++-++.++.|+.|.+|+....
T Consensus 14 ~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r 46 (1636)
T KOG3616|consen 14 DEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPR 46 (1636)
T ss_pred cceeeeeeecCCCceEEEEecCCcEEEEeeccc
Confidence 446677888899999999999999999998653
No 410
>KOG2109|consensus
Probab=53.97 E-value=15 Score=26.61 Aligned_cols=46 Identities=13% Similarity=0.291 Sum_probs=35.5
Q ss_pred ecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCC-eEEEEec
Q psy8803 11 LDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDG-YILVWTS 56 (111)
Q Consensus 11 iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~-~i~iw~~ 56 (111)
+=|+.+...+..|+.|...+..++|.+.+.++++++-.| .|.++.+
T Consensus 299 vkdf~S~a~i~QfkAhkspiSaLcfdqsgsllViasi~g~nVnvfRi 345 (788)
T KOG2109|consen 299 VKDFDSFADIRQFKAHKSPISALCFDQSGSLLVIASITGRNVNVFRI 345 (788)
T ss_pred eecccchhhhhheeeecCcccccccccCceEEEEEeeccceeeeEEe
Confidence 335556666777889999999999999999999987544 4666654
No 411
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=53.68 E-value=54 Score=20.64 Aligned_cols=49 Identities=16% Similarity=0.053 Sum_probs=27.7
Q ss_pred eecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeC-C--CeEEEEecCC
Q psy8803 10 RLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSK-D--GYILVWTSSY 58 (111)
Q Consensus 10 ~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~-d--~~i~iw~~~~ 58 (111)
.+||+.+++....-...+..+..-.+-+||+++.+|+. + ..+++++...
T Consensus 49 ~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~ 100 (243)
T PF07250_consen 49 VEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCT 100 (243)
T ss_pred EEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCC
Confidence 45666655432211123334444557789999999874 2 3577777543
No 412
>KOG4460|consensus
Probab=51.03 E-value=70 Score=23.00 Aligned_cols=33 Identities=12% Similarity=0.230 Sum_probs=25.8
Q ss_pred ccEEEEEEcCCC---cEEEEEeCCCeEEEEecCCCc
Q psy8803 28 HQVLHVSFSHNG---RYFATCSKDGYILVWTSSYPS 60 (111)
Q Consensus 28 ~~v~~i~~s~~~---~~l~s~~~d~~i~iw~~~~~~ 60 (111)
-.+...+|+|+. .+|+.-..|..|++||+....
T Consensus 166 ltl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~t 201 (741)
T KOG4460|consen 166 LTLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPT 201 (741)
T ss_pred eeeeeccccCCccCCceEEEEecCcEEEEEecCCcc
Confidence 357788999975 567777778999999997643
No 413
>KOG1900|consensus
Probab=50.68 E-value=1e+02 Score=24.54 Aligned_cols=52 Identities=15% Similarity=0.088 Sum_probs=32.9
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEE--------EcCC-CcEEEEEeCCCeEEEEecC
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVS--------FSHN-GRYFATCSKDGYILVWTSS 57 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~--------~s~~-~~~l~s~~~d~~i~iw~~~ 57 (111)
.|..+-+|+++++.....+.+-...|..+. |-|+ ..+|+.+. .-.+.++-+.
T Consensus 97 iDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT-~~ei~ilgV~ 157 (1311)
T KOG1900|consen 97 IDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVAT-PVEIVILGVS 157 (1311)
T ss_pred eCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecc-cceEEEEEEE
Confidence 588899999998777777776666666655 4444 33444443 3345566553
No 414
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=50.52 E-value=73 Score=21.19 Aligned_cols=25 Identities=16% Similarity=0.230 Sum_probs=18.6
Q ss_pred CcEEEEEeCCCeEEEEecCCCceee
Q psy8803 39 GRYFATCSKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 39 ~~~l~s~~~d~~i~iw~~~~~~~~~ 63 (111)
+..+..++.++.+...|..+++...
T Consensus 335 ~g~l~v~~~~G~l~~ld~~tG~~~~ 359 (394)
T PRK11138 335 NGYLVVGDSEGYLHWINREDGRFVA 359 (394)
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEE
Confidence 4556677788999999988876543
No 415
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=50.52 E-value=1e+02 Score=22.93 Aligned_cols=29 Identities=28% Similarity=0.466 Sum_probs=25.0
Q ss_pred ccEEEEEEcC-CCcEEEEEeCCCeEEEEec
Q psy8803 28 HQVLHVSFSH-NGRYFATCSKDGYILVWTS 56 (111)
Q Consensus 28 ~~v~~i~~s~-~~~~l~s~~~d~~i~iw~~ 56 (111)
.....++|.| +.+.||.-...|.-.||++
T Consensus 146 ~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i 175 (765)
T PF10214_consen 146 FPHADVAFNPWDQRQFAIVDEKGNWSVWDI 175 (765)
T ss_pred CccceEEeccCccceEEEEeccCcEEEEEe
Confidence 3567899999 4678999999999999999
No 416
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=50.36 E-value=81 Score=21.68 Aligned_cols=54 Identities=7% Similarity=-0.032 Sum_probs=39.7
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecC
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSS 57 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~ 57 (111)
=+.||.+.+++-+.-.....+.. .-.-..+.|.+..+.|++++.+..+..|...
T Consensus 151 QS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDsfvt~sss~~l~~Yky~ 204 (418)
T PF14727_consen 151 QSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDSFVTASSSWTLECYKYQ 204 (418)
T ss_pred EecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCEEEEecCceeEEEecHH
Confidence 36799999999876554444443 3344578899988999999988888888754
No 417
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=49.77 E-value=53 Score=21.44 Aligned_cols=27 Identities=19% Similarity=0.273 Sum_probs=19.0
Q ss_pred ccccEEEEEEcCCCcEEEEEeCCCeEE
Q psy8803 26 HTHQVLHVSFSHNGRYFATCSKDGYIL 52 (111)
Q Consensus 26 ~~~~v~~i~~s~~~~~l~s~~~d~~i~ 52 (111)
....+..+++.|||.++++-..++.|.
T Consensus 304 ~~~r~~~v~~~pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 304 FGGRPRDVAQGPDGALYVSDDSDGKIY 330 (331)
T ss_dssp SSS-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred CCCCceEEEEcCCCeEEEEECCCCeEe
Confidence 344788888999988888877777653
No 418
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=48.95 E-value=93 Score=21.98 Aligned_cols=57 Identities=7% Similarity=-0.146 Sum_probs=35.6
Q ss_pred cCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee
Q psy8803 6 EEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~ 63 (111)
-|.+.=+|+.+++..-............ ..-.+.+++.+..++.++.+|.++++.+-
T Consensus 440 ~g~l~AiD~~tGk~~W~~~~~~p~~~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw 496 (527)
T TIGR03075 440 MGSLIAWDPITGKIVWEHKEDFPLWGGV-LATAGDLVFYGTLEGYFKAFDAKTGEELW 496 (527)
T ss_pred ceeEEEEeCCCCceeeEecCCCCCCCcc-eEECCcEEEEECCCCeEEEEECCCCCEeE
Confidence 3567777888887665443211111111 12245677778889999999999987664
No 419
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=48.33 E-value=54 Score=19.10 Aligned_cols=31 Identities=19% Similarity=0.351 Sum_probs=24.7
Q ss_pred ccEEEEEEcCCC------cEEEEEeCCCeEEEEecCC
Q psy8803 28 HQVLHVSFSHNG------RYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 28 ~~v~~i~~s~~~------~~l~s~~~d~~i~iw~~~~ 58 (111)
..+..++|||-| .+|+.-..++.+.+|....
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 378899999932 3677888899999998764
No 420
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=47.43 E-value=84 Score=20.99 Aligned_cols=84 Identities=14% Similarity=-0.005 Sum_probs=43.5
Q ss_pred cccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeC-----------CCeEEEEecCCCc----eeeeecce
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSK-----------DGYILVWTSSYPS----KVKYSHDM 68 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~-----------d~~i~iw~~~~~~----~~~~~~~~ 68 (111)
+-..++++.|+.+++.+..--... ....+.|.+|++.|+-... ...+..|.+.+.. .+.....
T Consensus 147 ~e~~~l~v~Dl~tg~~l~d~i~~~-~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~- 224 (414)
T PF02897_consen 147 SEWYTLRVFDLETGKFLPDGIENP-KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPD- 224 (414)
T ss_dssp SSEEEEEEEETTTTEEEEEEEEEE-ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TT-
T ss_pred CceEEEEEEECCCCcCcCCccccc-ccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecC-
Confidence 334569999999887655321111 2223999999776555432 2236666665532 1111100
Q ss_pred eeeecCceeeEEEccCCCEEEEec
Q psy8803 69 KTFSWKYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 69 ~~~~~~~~~~v~~~~~~~~~~~~~ 92 (111)
... ....+..++++.++++..
T Consensus 225 ~~~---~~~~~~~s~d~~~l~i~~ 245 (414)
T PF02897_consen 225 EPF---WFVSVSRSKDGRYLFISS 245 (414)
T ss_dssp CTT---SEEEEEE-TTSSEEEEEE
T ss_pred CCc---EEEEEEecCcccEEEEEE
Confidence 000 022456777888776543
No 421
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=45.42 E-value=50 Score=22.27 Aligned_cols=31 Identities=26% Similarity=0.454 Sum_probs=24.9
Q ss_pred ccEEEEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 28 HQVLHVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 28 ~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
..|..+...+..+.+.+...++.|.+|++..
T Consensus 190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 190 PKIVQVAVDPSRRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp --EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred hceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence 3488999988889999999999999999974
No 422
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=45.30 E-value=77 Score=19.99 Aligned_cols=36 Identities=17% Similarity=0.263 Sum_probs=25.2
Q ss_pred eeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecC
Q psy8803 22 VLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSS 57 (111)
Q Consensus 22 ~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~ 57 (111)
.+.+-...++.++|.|+ +.+++....++.|...+..
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~ 52 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD 52 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC
Confidence 44556677999999997 5577777888888888765
No 423
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=43.33 E-value=1.1e+02 Score=20.96 Aligned_cols=73 Identities=16% Similarity=0.215 Sum_probs=33.4
Q ss_pred cEEEEEEcCCCcEEEEEeCCC----------------eEEEEecCCCcee---eeecceeeeecC---ceeeEEEccCCC
Q psy8803 29 QVLHVSFSHNGRYFATCSKDG----------------YILVWTSSYPSKV---KYSHDMKTFSWK---YTQYSQFNESDT 86 (111)
Q Consensus 29 ~v~~i~~s~~~~~l~s~~~d~----------------~i~iw~~~~~~~~---~~~~~~~~~~~~---~~~~v~~~~~~~ 86 (111)
......-++|+++++.=+.|. .|++++++..... .|......+.-. .--...|+|++.
T Consensus 284 ~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk 363 (386)
T PF14583_consen 284 WCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSFSPDGK 363 (386)
T ss_dssp SEEEEEE-TTSSEEEEEE-------------------EEEEEETTTTEEEEEEE-------BTTBSSTT----EE-TTSS
T ss_pred ceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecCCCccCCCCCccCCCCC
Confidence 344555678999987644332 4556777654322 122111100000 012568999999
Q ss_pred EEEEeccccCCccccCceEEEe
Q psy8803 87 LLLVSGVHFGTPQSTSGEIAVF 108 (111)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~i~iw 108 (111)
.++... ...|...||
T Consensus 364 ~VlF~S-------d~~G~~~vY 378 (386)
T PF14583_consen 364 WVLFRS-------DMEGPPAVY 378 (386)
T ss_dssp EEEEEE--------TTSS-EEE
T ss_pred EEEEEC-------CCCCCccEE
Confidence 998877 555555554
No 424
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=40.99 E-value=33 Score=14.53 Aligned_cols=22 Identities=18% Similarity=0.279 Sum_probs=17.8
Q ss_pred ccEEEEEEcCCCcEEEEEeCCC
Q psy8803 28 HQVLHVSFSHNGRYFATCSKDG 49 (111)
Q Consensus 28 ~~v~~i~~s~~~~~l~s~~~d~ 49 (111)
.....|+.+++|+.+++|..++
T Consensus 13 ~~~~~IavD~~GNiYv~G~T~~ 34 (38)
T PF06739_consen 13 DYGNGIAVDSNGNIYVTGYTNG 34 (38)
T ss_pred eeEEEEEECCCCCEEEEEeecC
Confidence 4578899999999999987654
No 425
>PF02870 Methyltransf_1N: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; InterPro: IPR008332 Synonym(s): 6-O-methylguanine-DNA methyltransferase, O-6-methylguanine-DNA-alkyltransferase The repair of DNA containing O6-alkylated guanine is carried out by DNA-[protein]-cysteine S-methyltransferase (2.1.1.63 from EC). The major mutagenic and carcinogenic effect of methylating agents in DNA is the formation of O6-alkylguanine. The alkyl group at the O-6 position is transferred to a cysteine residue in the enzyme []. This is a suicide reaction since the enzyme is irreversibly inactivated and the methylated protein accumulates as a dead-end product. Most, but not all of the methyltransferases are also able to repair O-4-methylthymine. DNA-[protein]-cysteine S-methyltransferases are widely distributed and are found in various prokaryotic and eukaryotic sources []. This group of proteins are characterised by having an N-terminal ribonuclease-like domain associated with 6-O-methylguanine DNA methyltransferase activity (IPR001497 from INTERPRO).; GO: 0003908 methylated-DNA-[protein]-cysteine S-methyltransferase activity, 0006281 DNA repair; PDB: 1SFE_A 1T39_B 1T38_A 1EH7_A 1EH6_A 1YFH_C 1EH8_A 1QNT_A.
Probab=40.76 E-value=41 Score=16.47 Aligned_cols=24 Identities=17% Similarity=0.015 Sum_probs=18.4
Q ss_pred EcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 35 FSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 35 ~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
=+|-|.+++.+++.+.+.|+-...
T Consensus 8 ~sPlG~l~l~a~e~gL~~i~f~~~ 31 (77)
T PF02870_consen 8 DSPLGPLLLAASEKGLCGIDFEDQ 31 (77)
T ss_dssp EETTEEEEEEEETTCEEEEEEEC-
T ss_pred cCCCeEEEEEEECCeEEEEEECCC
Confidence 377899999999999887776543
No 426
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=40.11 E-value=1.4e+02 Score=21.55 Aligned_cols=21 Identities=24% Similarity=0.374 Sum_probs=17.1
Q ss_pred CCcEEEEEeCCCeEEEEecCC
Q psy8803 38 NGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 38 ~~~~l~s~~~d~~i~iw~~~~ 58 (111)
..-+++.++..|-|++||--.
T Consensus 572 esGyIa~as~kGDirLyDRig 592 (776)
T COG5167 572 ESGYIAAASRKGDIRLYDRIG 592 (776)
T ss_pred cCceEEEecCCCceeeehhhc
Confidence 356899999999999998643
No 427
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=39.86 E-value=1.4e+02 Score=21.28 Aligned_cols=58 Identities=16% Similarity=0.272 Sum_probs=32.2
Q ss_pred CcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 39 GRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 39 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.+-+++-.++|++..+..-..+..-.. .. ....+.++++|.+.+++. -..++|+++.+
T Consensus 328 rkgF~~l~~~G~L~~f~st~~~~lL~~-~~----~~~~~~~~~Sp~~~~Ll~---------e~~gki~~~~l 385 (733)
T COG4590 328 RKGFYSLYRNGTLQSFYSTSEKLLLFE-RA----YQAPQLVAMSPNQAYLLS---------EDQGKIRLAQL 385 (733)
T ss_pred cceEEEEcCCCceeeeecccCcceehh-hh----hcCcceeeeCcccchhee---------ecCCceEEEEe
Confidence 344555556666665543332222111 11 124457889998888876 45667887765
No 428
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=39.70 E-value=1.6e+02 Score=22.02 Aligned_cols=75 Identities=15% Similarity=0.198 Sum_probs=44.9
Q ss_pred cccEEEEEEc--CCCcEEEEEeCCCeEEEEecCCC-ceeeeecceeeeecCceeeEEEccCC---C--EEEEeccccCCc
Q psy8803 27 THQVLHVSFS--HNGRYFATCSKDGYILVWTSSYP-SKVKYSHDMKTFSWKYTQYSQFNESD---T--LLLVSGVHFGTP 98 (111)
Q Consensus 27 ~~~v~~i~~s--~~~~~l~s~~~d~~i~iw~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~---~--~~~~~~~~~~~~ 98 (111)
...++.++++ ...++||.++....|.||-.... ....+..... ....+-+|+|-++. . ..++++
T Consensus 163 ~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~~--~~hNIP~VSFl~~~~d~~G~v~v~a~------ 234 (717)
T PF08728_consen 163 GASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVPSHQ--HSHNIPNVSFLDDDLDPNGHVKVVAT------ 234 (717)
T ss_pred CCceeEEEEEecCcceEEEEecCCceEEEEEEeccccccccccccc--cccCCCeeEeecCCCCCccceEEEEE------
Confidence 4578889988 67889999888888888876542 2222211111 11334456666643 1 244444
Q ss_pred cccCceEEEeec
Q psy8803 99 QSTSGEIAVFSL 110 (111)
Q Consensus 99 ~~~~~~i~iw~~ 110 (111)
+-.|.+-+|++
T Consensus 235 -dI~G~v~~~~I 245 (717)
T PF08728_consen 235 -DISGEVWTFKI 245 (717)
T ss_pred -eccCcEEEEEE
Confidence 77777887765
No 429
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=39.48 E-value=1e+02 Score=19.77 Aligned_cols=85 Identities=11% Similarity=0.111 Sum_probs=46.1
Q ss_pred CeeeecCCCCceeeeeeec-----ccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeee--ecce---------ee
Q psy8803 7 EYKRLDYHTPIVETEVLTQ-----HTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKY--SHDM---------KT 70 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~-----~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~--~~~~---------~~ 70 (111)
..+.++|..+-+....+.- .-..+..+.|. +|..+|-.=....|...|..++..... .... ..
T Consensus 149 ~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~ 227 (264)
T PF05096_consen 149 SRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQ 227 (264)
T ss_dssp SEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST-
T ss_pred cceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhccccccccc
Confidence 3455556544344444331 12345556665 577777776666788888888766541 0000 00
Q ss_pred eecCceeeEEEccCCCEEEEec
Q psy8803 71 FSWKYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 71 ~~~~~~~~v~~~~~~~~~~~~~ 92 (111)
-.-.-.+.+|+.|....++++|
T Consensus 228 ~~~dVLNGIAyd~~~~~l~vTG 249 (264)
T PF05096_consen 228 PDDDVLNGIAYDPETDRLFVTG 249 (264)
T ss_dssp -TTS-EEEEEEETTTTEEEEEE
T ss_pred ccCCeeEeEeEeCCCCEEEEEe
Confidence 0013467899999999999987
No 430
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=37.84 E-value=72 Score=20.43 Aligned_cols=26 Identities=15% Similarity=0.215 Sum_probs=19.1
Q ss_pred cEEEEEEcCCCcEEEEEeCCCeEEEE
Q psy8803 29 QVLHVSFSHNGRYFATCSKDGYILVW 54 (111)
Q Consensus 29 ~v~~i~~s~~~~~l~s~~~d~~i~iw 54 (111)
....--|+.+|.+++++.+.+.++..
T Consensus 260 ~~~g~i~~~~G~LvAs~~Qegl~r~~ 285 (286)
T PRK10526 260 FVRGEFYTQDGVLVASTVQEGVMRNH 285 (286)
T ss_pred EEEEEEECCCCCEEEEEEeeEEEEec
Confidence 34455578889999999888777653
No 431
>cd03444 Thioesterase_II_repeat1 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=34.36 E-value=64 Score=17.05 Aligned_cols=20 Identities=25% Similarity=0.494 Sum_probs=13.4
Q ss_pred EEEEEEcCCCcEEEEEeCCC
Q psy8803 30 VLHVSFSHNGRYFATCSKDG 49 (111)
Q Consensus 30 v~~i~~s~~~~~l~s~~~d~ 49 (111)
...--|+++|++++++.+++
T Consensus 83 ~~~~l~~~~G~LvAs~~Q~~ 102 (104)
T cd03444 83 VEGRIFTRDGELVASVAQEG 102 (104)
T ss_pred EEEEEECCCCCEEEEEEEee
Confidence 34445777888888777654
No 432
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=33.55 E-value=2.1e+02 Score=21.49 Aligned_cols=66 Identities=11% Similarity=0.053 Sum_probs=42.7
Q ss_pred cccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeee----------cceeeeecC-----ceeeEEEccCCCEEEEe
Q psy8803 27 THQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYS----------HDMKTFSWK-----YTQYSQFNESDTLLLVS 91 (111)
Q Consensus 27 ~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~----------~~~~~~~~~-----~~~~v~~~~~~~~~~~~ 91 (111)
.+.|..+....-+..++-.-.||+|.++|-.+.+.+... .......+. +...++|+|....++..
T Consensus 259 ~~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~ 338 (753)
T PF11635_consen 259 NKRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQI 338 (753)
T ss_pred CCeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEE
Confidence 456778877777888899999999999998765333211 111111111 22358899988877665
Q ss_pred c
Q psy8803 92 G 92 (111)
Q Consensus 92 ~ 92 (111)
.
T Consensus 339 ~ 339 (753)
T PF11635_consen 339 D 339 (753)
T ss_pred e
Confidence 4
No 433
>KOG1983|consensus
Probab=33.01 E-value=87 Score=24.24 Aligned_cols=25 Identities=28% Similarity=0.492 Sum_probs=22.3
Q ss_pred cCCCcEEEEEeCCCeEEEEecCCCc
Q psy8803 36 SHNGRYFATCSKDGYILVWTSSYPS 60 (111)
Q Consensus 36 s~~~~~l~s~~~d~~i~iw~~~~~~ 60 (111)
.+++..++++..|+.+..||...+.
T Consensus 243 ~~~~~~~v~~h~Dgs~~fWd~s~g~ 267 (993)
T KOG1983|consen 243 SRDGSHFVSYHTDGSYAFWDVSSGK 267 (993)
T ss_pred ccCCceEEEEEecCCEEeeecCCCc
Confidence 6779999999999999999998753
No 434
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=32.98 E-value=1.7e+02 Score=20.37 Aligned_cols=58 Identities=10% Similarity=-0.044 Sum_probs=35.5
Q ss_pred ccCeeeecCCCCceeeeeeeccc--------ccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCcee
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHT--------HQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKV 62 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~--------~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~ 62 (111)
.+|.+.-.|..+++.+-...... .....-...-.+..+..++.|+.++.+|.++++..
T Consensus 364 ~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~tG~~l 429 (488)
T cd00216 364 GKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATTGKEL 429 (488)
T ss_pred CceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCCCcee
Confidence 45677777888887655443210 01110011124677778889999999999987655
No 435
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=32.96 E-value=46 Score=13.80 Aligned_cols=20 Identities=15% Similarity=0.267 Sum_probs=15.2
Q ss_pred EEEeCCCeEEEEecCCCcee
Q psy8803 43 ATCSKDGYILVWTSSYPSKV 62 (111)
Q Consensus 43 ~s~~~d~~i~iw~~~~~~~~ 62 (111)
..+..++.+.-.|.++++..
T Consensus 4 ~~~~~~g~l~AlD~~TG~~~ 23 (38)
T PF01011_consen 4 YVGTPDGYLYALDAKTGKVL 23 (38)
T ss_dssp EEETTTSEEEEEETTTTSEE
T ss_pred EEeCCCCEEEEEECCCCCEE
Confidence 34478889999999887654
No 436
>PRK13616 lipoprotein LpqB; Provisional
Probab=32.46 E-value=2e+02 Score=20.92 Aligned_cols=26 Identities=15% Similarity=0.230 Sum_probs=19.7
Q ss_pred cccEEEEEEcCCCcEEEEEeCCCeEEE
Q psy8803 27 THQVLHVSFSHNGRYFATCSKDGYILV 53 (111)
Q Consensus 27 ~~~v~~i~~s~~~~~l~s~~~d~~i~i 53 (111)
.+.|..+.|||||..++--. ++.+.+
T Consensus 447 ~g~Issl~wSpDG~RiA~i~-~g~v~V 472 (591)
T PRK13616 447 PGPISELQLSRDGVRAAMII-GGKVYL 472 (591)
T ss_pred CCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence 45799999999998776655 356666
No 437
>COG4880 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats [General function prediction only]
Probab=31.56 E-value=1.9e+02 Score=20.42 Aligned_cols=46 Identities=20% Similarity=0.212 Sum_probs=33.7
Q ss_pred ceeeeeeec--ccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCcee
Q psy8803 17 IVETEVLTQ--HTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKV 62 (111)
Q Consensus 17 ~~~~~~~~~--~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~ 62 (111)
+..+..++| ....|+++.|.-|.-+|++--+-.-+.+.|+.+++..
T Consensus 415 lnvvGkltGl~~gERIYAvRf~gdv~yiVTfrqtDPlfviDlsNPenP 462 (603)
T COG4880 415 LNVVGKLTGLAPGERIYAVRFVGDVLYIVTFRQTDPLFVIDLSNPENP 462 (603)
T ss_pred CcEEEEEeccCCCceEEEEEEeCceEEEEEEeccCceEEEEcCCCCCC
Confidence 344555554 4678999999888888988877777888898875433
No 438
>PF15525 DUF4652: Domain of unknown function (DUF4652)
Probab=31.05 E-value=1.3e+02 Score=18.40 Aligned_cols=59 Identities=17% Similarity=0.268 Sum_probs=31.5
Q ss_pred CeEEEEecCCCceeee-ecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 49 GYILVWTSSYPSKVKY-SHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 49 ~~i~iw~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
|.|+|.|......... ..... -...|- .+-|--+...+++.|..+++. +..|.+.++++
T Consensus 88 GkIYIkn~~~~~~~~L~i~~~~-~k~sPK-~i~WiDD~~L~vIIG~a~GTv-S~GGnLy~~nl 147 (200)
T PF15525_consen 88 GKIYIKNLNNNNWWSLQIDQNE-EKYSPK-YIEWIDDNNLAVIIGYAHGTV-SKGGNLYKYNL 147 (200)
T ss_pred eeEEEEecCCCceEEEEecCcc-cccCCc-eeEEecCCcEEEEEccccceE-ccCCeEEEEEc
Confidence 5688888765432210 00000 001111 333444666777778778875 56777888775
No 439
>KOG4499|consensus
Probab=30.75 E-value=1.5e+02 Score=19.06 Aligned_cols=48 Identities=6% Similarity=0.057 Sum_probs=32.0
Q ss_pred EEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 33 VSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 33 i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
++...+|+++++.-..+++...|..+++.+.... .. -..+++++|--.
T Consensus 217 m~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eik-lP---t~qitsccFgGk 264 (310)
T KOG4499|consen 217 MTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIK-LP---TPQITSCCFGGK 264 (310)
T ss_pred ceEccCCcEEEEEecCcEEEEECCCCCcEEEEEE-cC---CCceEEEEecCC
Confidence 4446678899888888999999999887765211 00 133456666654
No 440
>cd01211 GAPCenA GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA is a centrosome-associated GTPase activating protein (GAP) for rab 6. It consists of an N-terminal PTB domain and a C-terminal TBC domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=30.51 E-value=1.1e+02 Score=17.26 Aligned_cols=21 Identities=10% Similarity=-0.154 Sum_probs=15.7
Q ss_pred cccCeeeecCCCCceeeeeee
Q psy8803 4 WYEEYKRLDYHTPIVETEVLT 24 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~ 24 (111)
...|.|+|.|..++..+..+.
T Consensus 48 ~seG~V~l~D~~t~~~ias~~ 68 (125)
T cd01211 48 NIEGTVKLIDAQSNKVIASFS 68 (125)
T ss_pred CCCceEEEEcCCCCcEEEEEE
Confidence 467889999988877666554
No 441
>KOG4649|consensus
Probab=30.21 E-value=1.6e+02 Score=19.25 Aligned_cols=22 Identities=14% Similarity=0.137 Sum_probs=18.1
Q ss_pred CcEEEEEeCCCeEEEEecCCCc
Q psy8803 39 GRYFATCSKDGYILVWTSSYPS 60 (111)
Q Consensus 39 ~~~l~s~~~d~~i~iw~~~~~~ 60 (111)
|+.++.|+..+.+++.+.+++.
T Consensus 63 gdfVV~GCy~g~lYfl~~~tGs 84 (354)
T KOG4649|consen 63 GDFVVLGCYSGGLYFLCVKTGS 84 (354)
T ss_pred CCEEEEEEccCcEEEEEecchh
Confidence 6678888889999998888763
No 442
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=30.14 E-value=2.3e+02 Score=20.89 Aligned_cols=68 Identities=10% Similarity=0.088 Sum_probs=38.5
Q ss_pred cccccEEEEEEcCC----CcEEEEEeCCCeEEEEecCCC-----c-eeeeecceeeeecCceeeEEEccCCCEEEEec
Q psy8803 25 QHTHQVLHVSFSHN----GRYFATCSKDGYILVWTSSYP-----S-KVKYSHDMKTFSWKYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 25 ~~~~~v~~i~~s~~----~~~l~s~~~d~~i~iw~~~~~-----~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 92 (111)
|.-..|..+.|.|- .-.|+..-..+.+.+|.+-.. + .+.+..+++.----..|...|+|....+.+..
T Consensus 54 GqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT 131 (671)
T PF15390_consen 54 GQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLT 131 (671)
T ss_pred eccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEe
Confidence 34467899999994 223444444678999998631 1 11122233221111346778888777666554
No 443
>PF13983 YsaB: YsaB-like lipoprotein
Probab=29.35 E-value=52 Score=16.33 Aligned_cols=12 Identities=25% Similarity=0.730 Sum_probs=9.0
Q ss_pred EEEEEcCCCcEE
Q psy8803 31 LHVSFSHNGRYF 42 (111)
Q Consensus 31 ~~i~~s~~~~~l 42 (111)
.-++|.+||+.|
T Consensus 61 FvCSFD~dGqFL 72 (77)
T PF13983_consen 61 FVCSFDADGQFL 72 (77)
T ss_pred eEEeECCCCcEE
Confidence 445799999876
No 444
>PF00843 Arena_nucleocap: Arenavirus nucleocapsid protein; InterPro: IPR000229 Arenaviruses are single stranded RNA viruses. The arenavirus S RNAs that have been characterised include conserved terminal sequences, an ambisense arrangement of the coding regions for the precursor glycoprotein (GPC) and nucleocapsid (N) proteins and an intergenic region capable of forming a base-paired "hairpin" structure. The mature glycoproteins that result are G1 and G2 and the N protein []. This family represents the nucleocapsid protein that encapsulates the viral ssRNA [].; GO: 0019013 viral nucleocapsid; PDB: 3MX5_A 3MX2_C 3MWT_C 3Q7C_A 3MWP_B 3Q7B_A 3T5Q_E 3T5N_A 3R3L_B.
Probab=28.49 E-value=27 Score=24.11 Aligned_cols=12 Identities=17% Similarity=0.531 Sum_probs=7.9
Q ss_pred ccCceEEEeecC
Q psy8803 100 STSGEIAVFSLQ 111 (111)
Q Consensus 100 ~~~~~i~iw~~~ 111 (111)
..+|.|+|||++
T Consensus 149 ~~~GVVrvWDvk 160 (533)
T PF00843_consen 149 GRNGVVRVWDVK 160 (533)
T ss_dssp -SSSEE-SEE-S
T ss_pred CCCCeEEEEecC
Confidence 568999999975
No 445
>PF06200 tify: tify domain; InterPro: IPR010399 The tify domain is a 36-amino acid domain only found among Embryophyta (land plants). It has been named after the most conserved amino acid pattern (TIF[F/Y]XG) it contains, but was previously known as the Zim domain. As the use of uppercase characters (TIFY) might imply that the domain is fully conserved across proteins, a lowercase lettering has been chosen in an attempt to highlight the reality of its natural variability. Based on the domain architecture, tify domain containing proteins can be classified into two groups. Group I is formed by proteins possessing a CCT (CONSTANS, CO-like, and TOC1) domain and a GATA-type zinc finger in addition to the tify domain. Group II contains proteins characterised by the tify domain but lacking a GATA-type zinc finger. Tify domain containing proteins might be involved in developmental processes and some of them have features that are characteristic for transcription factors: a nuclear localisation and the presence of a putative DNA-binding domain []. Some proteins known to contain a tify domain include: Arabidopsis thaliana Zinc-finger protein expressed in Inflorescence Meristem (ZIM), a putative transcription factor involved in inflorescence and flower development [, ]. A. thaliana ZIM-like proteins (ZML) []. A. thaliana PEAPOD1 and PEAPOD2 (PPD1 and PPD2) [].
Probab=28.48 E-value=37 Score=14.45 Aligned_cols=12 Identities=8% Similarity=-0.023 Sum_probs=9.3
Q ss_pred cccCeeeecCCC
Q psy8803 4 WYEEYKRLDYHT 15 (111)
Q Consensus 4 ~~d~~i~iw~~~ 15 (111)
+|+|.+.++|-.
T Consensus 11 fY~G~V~Vfd~v 22 (36)
T PF06200_consen 11 FYGGQVCVFDDV 22 (36)
T ss_pred EECCEEEEeCCC
Confidence 578899998843
No 446
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=28.35 E-value=2.4e+02 Score=20.73 Aligned_cols=67 Identities=13% Similarity=0.135 Sum_probs=33.4
Q ss_pred EEEEcCCCcEEEEEeCCCeEEEEecCC-CceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEee
Q psy8803 32 HVSFSHNGRYFATCSKDGYILVWTSSY-PSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 32 ~i~~s~~~~~l~s~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
.+.|+|....|+.-.....--+++++. ...++. .+.. -..+.+.+|.+++..++++- +..=.-.|||
T Consensus 117 GCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVka--Di~~--~G~IhCACWT~DG~RLVVAv-------GSsLHSyiWd 184 (671)
T PF15390_consen 117 GCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKA--DIKT--SGLIHCACWTKDGQRLVVAV-------GSSLHSYIWD 184 (671)
T ss_pred cccccCCCceEEEEecCceeEeeeeeeCCceEEE--eccC--CceEEEEEecCcCCEEEEEe-------CCeEEEEEec
Confidence 456777666554433222222444432 122221 1111 13455778889999887765 3344456676
No 447
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.27 E-value=1.8e+02 Score=19.28 Aligned_cols=74 Identities=19% Similarity=0.292 Sum_probs=44.2
Q ss_pred EEEEEcCC-CcEEEEEeCCCe-EEEEecCCCceee--eecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEE
Q psy8803 31 LHVSFSHN-GRYFATCSKDGY-ILVWTSSYPSKVK--YSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIA 106 (111)
Q Consensus 31 ~~i~~s~~-~~~l~s~~~d~~-i~iw~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~ 106 (111)
-.|.|+|- .+-++-+-..|+ ..++|........ +..+-+.. .-.=.|+|++.++.++-.++.+ .-+.|-
T Consensus 71 Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHf----yGHGvfs~dG~~LYATEndfd~---~rGViG 143 (366)
T COG3490 71 HGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHF----YGHGVFSPDGRLLYATENDFDP---NRGVIG 143 (366)
T ss_pred CCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCcee----ecccccCCCCcEEEeecCCCCC---CCceEE
Confidence 35677775 455555655554 5578877654332 22222211 1133689999999888766633 467888
Q ss_pred EeecC
Q psy8803 107 VFSLQ 111 (111)
Q Consensus 107 iw~~~ 111 (111)
|||.+
T Consensus 144 vYd~r 148 (366)
T COG3490 144 VYDAR 148 (366)
T ss_pred EEecc
Confidence 88864
No 448
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=28.02 E-value=1e+02 Score=22.93 Aligned_cols=56 Identities=14% Similarity=0.093 Sum_probs=36.0
Q ss_pred CcccccCeeeecCCCCc--eeee-eeecccccEEEEEEcCCC---c---EEEEEeCCCeEEEEec
Q psy8803 1 KKSWYEEYKRLDYHTPI--VETE-VLTQHTHQVLHVSFSHNG---R---YFATCSKDGYILVWTS 56 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~--~~~~-~~~~~~~~v~~i~~s~~~---~---~l~s~~~d~~i~iw~~ 56 (111)
|+|.+-..|.|+-+... +... .-..+...|.+|+|-++. . .+++++-.|.+-+|++
T Consensus 181 AVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 181 AVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 45666677777666532 1111 111367789999997642 2 6778888899888887
No 449
>PF12566 DUF3748: Protein of unknown function (DUF3748); InterPro: IPR022223 This domain family is found in bacteria and eukaryotes, and is approximately 120 amino acids in length.
Probab=27.49 E-value=72 Score=17.70 Aligned_cols=22 Identities=18% Similarity=0.294 Sum_probs=15.8
Q ss_pred EEcCCCcEEEEEeCCCeEEEEe
Q psy8803 34 SFSHNGRYFATCSKDGYILVWT 55 (111)
Q Consensus 34 ~~s~~~~~l~s~~~d~~i~iw~ 55 (111)
.|||||++|.-.-.|..+.-.|
T Consensus 74 vfSpDG~~lSFTYNDhVmhe~d 95 (122)
T PF12566_consen 74 VFSPDGSWLSFTYNDHVMHELD 95 (122)
T ss_pred EECCCCCEEEEEecchhhcccc
Confidence 5899999887777776655444
No 450
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=27.45 E-value=2.1e+02 Score=19.76 Aligned_cols=22 Identities=18% Similarity=0.415 Sum_probs=16.5
Q ss_pred EEEEcCCCcEEEEEeCCCeEEE
Q psy8803 32 HVSFSHNGRYFATCSKDGYILV 53 (111)
Q Consensus 32 ~i~~s~~~~~l~s~~~d~~i~i 53 (111)
.++.+|++++|+.+..++.+.+
T Consensus 6 ~isls~~~d~laiA~~~r~vil 27 (415)
T PF14655_consen 6 SISLSPDGDLLAIARGQRLVIL 27 (415)
T ss_pred eEEecCCCCEEEEEcCCEEEEE
Confidence 4577899999999877665544
No 451
>PRK14751 tetracycline resistance determinant leader peptide; Provisional
Probab=27.10 E-value=50 Score=12.84 Aligned_cols=10 Identities=30% Similarity=0.441 Sum_probs=6.8
Q ss_pred CCeEEEEecC
Q psy8803 48 DGYILVWTSS 57 (111)
Q Consensus 48 d~~i~iw~~~ 57 (111)
|++|.-||.-
T Consensus 14 dksi~hwdf~ 23 (28)
T PRK14751 14 DKSIYHWDFY 23 (28)
T ss_pred cCceeeeeeh
Confidence 6677777753
No 452
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=26.62 E-value=1.8e+02 Score=22.43 Aligned_cols=50 Identities=18% Similarity=0.106 Sum_probs=31.5
Q ss_pred eeeecCCCCceeeeee-ecccccEEEEEEcCCCcEEEE-EeCCC-----eEEEEecCC
Q psy8803 8 YKRLDYHTPIVETEVL-TQHTHQVLHVSFSHNGRYFAT-CSKDG-----YILVWTSSY 58 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~-~~~~~~v~~i~~s~~~~~l~s-~~~d~-----~i~iw~~~~ 58 (111)
.+.+-|+....+.. + ..+...|..-.|||||+.|+= .+..+ .|.+-++++
T Consensus 330 ~L~~~D~dG~n~~~-ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t 386 (912)
T TIGR02171 330 NLAYIDYTKGASRA-VEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNA 386 (912)
T ss_pred eEEEEecCCCCceE-EEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhc
Confidence 45555655333332 3 336778888899999998876 33222 477777765
No 453
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=26.57 E-value=1.3e+02 Score=17.16 Aligned_cols=25 Identities=12% Similarity=0.231 Sum_probs=17.7
Q ss_pred EEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 34 SFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 34 ~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
.|......|+++...++|.|.+...
T Consensus 5 kfDG~~pcL~~aT~~gKV~IH~ph~ 29 (136)
T PF14781_consen 5 KFDGVHPCLACATTGGKVFIHNPHE 29 (136)
T ss_pred EeCCCceeEEEEecCCEEEEECCCc
Confidence 4554555677788888999998753
No 454
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.25 E-value=2e+02 Score=19.04 Aligned_cols=37 Identities=11% Similarity=0.098 Sum_probs=24.0
Q ss_pred ecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCc
Q psy8803 24 TQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPS 60 (111)
Q Consensus 24 ~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~ 60 (111)
.+-...++.+.|+|+.+.|.+......-.++=...+.
T Consensus 82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~Gd 118 (316)
T COG3204 82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGD 118 (316)
T ss_pred ccccccccceeeCCCcceEEEecCCCceEEEEecCCc
Confidence 3445679999999998877776555444455333333
No 455
>KOG0183|consensus
Probab=25.79 E-value=44 Score=20.72 Aligned_cols=9 Identities=44% Similarity=0.870 Sum_probs=7.3
Q ss_pred EEcCCCcEE
Q psy8803 34 SFSHNGRYF 42 (111)
Q Consensus 34 ~~s~~~~~l 42 (111)
.|||||++|
T Consensus 10 vFSPDGhL~ 18 (249)
T KOG0183|consen 10 VFSPDGHLF 18 (249)
T ss_pred EECCCCCEE
Confidence 389999876
No 456
>PF08954 DUF1900: Domain of unknown function (DUF1900); InterPro: IPR015049 This domain is predominantly found in the structural protein coronin, and is duplicated in some sequences. It has no known function []. ; PDB: 2B4E_A 2AQ5_A.
Probab=24.17 E-value=1.5e+02 Score=16.86 Aligned_cols=32 Identities=19% Similarity=0.195 Sum_probs=17.8
Q ss_pred ccEEEEEEcCCCcEEEEEe-CCCeEEEEecCCC
Q psy8803 28 HQVLHVSFSHNGRYFATCS-KDGYILVWTSSYP 59 (111)
Q Consensus 28 ~~v~~i~~s~~~~~l~s~~-~d~~i~iw~~~~~ 59 (111)
..+.---|++|.++|..++ .|+.|+.|.+...
T Consensus 11 ~g~L~P~yD~dt~llyl~gKGD~~ir~yEv~~~ 43 (136)
T PF08954_consen 11 SGVLMPFYDEDTNLLYLAGKGDGNIRYYEVSDE 43 (136)
T ss_dssp SS-EEEEE-TTT-EEEEEETT-S-EEEEEE-SS
T ss_pred CceeEeeEcCCCCEEEEEeccCcEEEEEEEcCC
Confidence 4455556888866655544 5788999998765
No 457
>KOG1520|consensus
Probab=24.00 E-value=1.8e+02 Score=19.83 Aligned_cols=18 Identities=11% Similarity=0.290 Sum_probs=14.0
Q ss_pred ceeeEEEccCCCEEEEec
Q psy8803 75 YTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~ 92 (111)
..+.++.+|++..++++=
T Consensus 220 F~NGlaLS~d~sfvl~~E 237 (376)
T KOG1520|consen 220 FPNGLALSPDGSFVLVAE 237 (376)
T ss_pred ccccccCCCCCCEEEEEe
Confidence 456788999999888754
No 458
>KOG2467|consensus
Probab=22.86 E-value=82 Score=21.57 Aligned_cols=18 Identities=28% Similarity=0.527 Sum_probs=14.5
Q ss_pred EEEEeccccCCccccCceEEEeecC
Q psy8803 87 LLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+-+++| +.|+.+.+||+|
T Consensus 342 y~lvtg-------GTDnHlvLvDLr 359 (477)
T KOG2467|consen 342 YKLVTG-------GTDNHLVLVDLR 359 (477)
T ss_pred ceEecC-------CccceEEEEecc
Confidence 445777 889999999986
No 459
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=21.96 E-value=2.8e+02 Score=20.68 Aligned_cols=30 Identities=20% Similarity=0.449 Sum_probs=27.6
Q ss_pred cccEEEEEEcCCCcEEEEEeCCCeEEEEec
Q psy8803 27 THQVLHVSFSHNGRYFATCSKDGYILVWTS 56 (111)
Q Consensus 27 ~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~ 56 (111)
.+.|-.+.|.+++..+...-++|.|.+||.
T Consensus 129 ~~kvv~Ik~~~~~~~I~vvl~nG~i~~~d~ 158 (670)
T PF10395_consen 129 DDKVVGIKFSSDGKIIYVVLENGSIQIYDF 158 (670)
T ss_pred ccceEEEEEecCCCEEEEEEcCCcEEEEec
Confidence 568889999999999999999999999999
No 460
>PF09081 DUF1921: Domain of unknown function (DUF1921); InterPro: IPR015165 This domain, which is found in a set of prokaryotic amylases, has no known function []. ; PDB: 1QI5_A 1JDC_A 2AMG_A 1QPK_A 1JDD_A 1QI4_A 1JDA_A 1GCY_A 1QI3_A.
Probab=21.95 E-value=68 Score=14.61 Aligned_cols=10 Identities=10% Similarity=0.614 Sum_probs=7.0
Q ss_pred ccCceEEEee
Q psy8803 100 STSGEIAVFS 109 (111)
Q Consensus 100 ~~~~~i~iw~ 109 (111)
...+.|+||.
T Consensus 42 ~dnG~vRiWr 51 (51)
T PF09081_consen 42 EDNGQVRIWR 51 (51)
T ss_dssp ETTTTEEEEE
T ss_pred ccCCcEEeeC
Confidence 4467799994
No 461
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=21.88 E-value=1.4e+02 Score=18.67 Aligned_cols=23 Identities=22% Similarity=0.397 Sum_probs=15.4
Q ss_pred cEEEEEEcCCCcEEEEEeCCCeE
Q psy8803 29 QVLHVSFSHNGRYFATCSKDGYI 51 (111)
Q Consensus 29 ~v~~i~~s~~~~~l~s~~~d~~i 51 (111)
.+..--|+.+|.++++..+++.+
T Consensus 248 ~~~~~l~d~~G~lvAs~~Qe~l~ 270 (271)
T TIGR00189 248 LVEGKIFTRDGVLIASTVQEGLV 270 (271)
T ss_pred EEEEEEECCCCCEEEEEEeeeec
Confidence 44455577788888888776543
No 462
>smart00135 LY Low-density lipoprotein-receptor YWTD domain. Type "B" repeats in low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. Also present in a variety of molecules similar to gp300/megalin.
Probab=21.85 E-value=79 Score=12.79 Aligned_cols=28 Identities=14% Similarity=-0.059 Sum_probs=15.6
Q ss_pred eeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 76 TQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
++.+++.+....+.-+- ...+.|...++
T Consensus 11 ~~~la~d~~~~~lYw~D-------~~~~~I~~~~~ 38 (43)
T smart00135 11 PNGLAVDWIEGRLYWTD-------WGLDVIEVANL 38 (43)
T ss_pred cCEEEEeecCCEEEEEe-------CCCCEEEEEeC
Confidence 34577777766665543 33355555544
No 463
>KOG3950|consensus
Probab=21.01 E-value=2.4e+02 Score=18.09 Aligned_cols=19 Identities=21% Similarity=0.502 Sum_probs=15.0
Q ss_pred cccEEEEEEcCCCcEEEEE
Q psy8803 27 THQVLHVSFSHNGRYFATC 45 (111)
Q Consensus 27 ~~~v~~i~~s~~~~~l~s~ 45 (111)
...++.++.+|+|+++++.
T Consensus 259 ~q~v~eiCvC~nGkLfLs~ 277 (292)
T KOG3950|consen 259 RQKVFEICVCPNGKLFLSQ 277 (292)
T ss_pred cceEEEEEEecCCcEEEec
Confidence 3458899999999988854
No 464
>PF09984 DUF2222: Uncharacterized signal transduction histidine kinase domain (DUF2222); InterPro: IPR019247 This entry is found at the N terminus of various BarA-like signal transduction histidine kinases. These proteins are involved in the regulation of carbon metabolism via the csrA/csrB regulatory system. The role of this domain has not, as yet, been established. ; GO: 0004673 protein histidine kinase activity
Probab=20.11 E-value=1.8e+02 Score=16.83 Aligned_cols=26 Identities=19% Similarity=0.286 Sum_probs=18.7
Q ss_pred ccccEEEEEE-cCCCcEEEEEeCCCeE
Q psy8803 26 HTHQVLHVSF-SHNGRYFATCSKDGYI 51 (111)
Q Consensus 26 ~~~~v~~i~~-s~~~~~l~s~~~d~~i 51 (111)
|...|.++++ +.+.++|+++......
T Consensus 49 ~S~~VrsIaiFD~~n~L~vTSn~h~~~ 75 (146)
T PF09984_consen 49 HSPIVRSIAIFDANNQLFVTSNYHRDF 75 (146)
T ss_pred CCCceEEEEEEcCCCcEEEECCCcCCh
Confidence 5677899884 7778899987654433
Done!