Query psy8803
Match_columns 111
No_of_seqs 113 out of 1116
Neff 11.2
Searched_HMMs 29240
Date Fri Aug 16 19:41:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8803.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8803hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 99.9 1.4E-21 4.7E-26 122.5 10.2 98 2-111 232-330 (344)
2 4gqb_B Methylosome protein 50; 99.9 2.6E-21 9E-26 121.3 10.1 100 1-111 97-200 (344)
3 2ynn_A Coatomer subunit beta'; 99.9 5E-21 1.7E-25 117.8 11.0 101 1-111 71-171 (304)
4 2ynn_A Coatomer subunit beta'; 99.8 6.5E-20 2.2E-24 112.8 11.0 99 1-111 29-127 (304)
5 1got_B GT-beta; complex (GTP-b 99.8 8.8E-20 3E-24 113.8 11.7 98 2-111 159-256 (340)
6 4g56_B MGC81050 protein; prote 99.8 3.4E-20 1.1E-24 116.5 9.8 98 2-111 244-342 (357)
7 3ow8_A WD repeat-containing pr 99.8 5.6E-20 1.9E-24 114.1 10.6 99 1-111 180-278 (321)
8 4gq1_A NUP37; propeller, trans 99.8 1.6E-20 5.6E-25 119.2 7.9 100 1-111 105-217 (393)
9 1vyh_C Platelet-activating fac 99.8 6.2E-20 2.1E-24 117.1 10.4 98 2-111 313-410 (410)
10 3frx_A Guanine nucleotide-bind 99.8 3.2E-19 1.1E-23 110.4 13.2 103 1-111 81-226 (319)
11 3ow8_A WD repeat-containing pr 99.8 1.7E-19 5.9E-24 111.9 11.6 99 1-111 222-320 (321)
12 3frx_A Guanine nucleotide-bind 99.8 3.1E-19 1.1E-23 110.5 12.7 102 2-111 171-316 (319)
13 1vyh_C Platelet-activating fac 99.8 9.1E-20 3.1E-24 116.3 10.2 99 1-111 124-222 (410)
14 2xzm_R RACK1; ribosome, transl 99.8 5.4E-19 1.9E-23 110.2 13.1 58 1-58 92-149 (343)
15 2xzm_R RACK1; ribosome, transl 99.8 4.9E-19 1.7E-23 110.4 11.6 99 1-111 43-148 (343)
16 3vu4_A KMHSV2; beta-propeller 99.8 6.3E-19 2.1E-23 110.6 12.1 98 3-111 155-270 (355)
17 1got_B GT-beta; complex (GTP-b 99.8 7.4E-19 2.5E-23 109.6 11.9 101 1-111 200-300 (340)
18 2pbi_B Guanine nucleotide-bind 99.8 9.1E-19 3.1E-23 109.9 12.4 99 1-111 170-270 (354)
19 1nr0_A Actin interacting prote 99.8 7.9E-19 2.7E-23 116.7 11.9 103 1-111 164-269 (611)
20 2hes_X YDR267CP; beta-propelle 99.8 8.5E-19 2.9E-23 109.0 10.7 101 1-110 74-182 (330)
21 3iz6_a 40S ribosomal protein R 99.8 5.4E-19 1.8E-23 111.7 9.8 102 1-110 222-327 (380)
22 2w18_A PALB2, fancn, partner a 99.8 9.2E-19 3.1E-23 109.5 10.6 99 2-111 198-356 (356)
23 4h5i_A Guanine nucleotide-exch 99.8 1E-18 3.4E-23 110.2 10.8 93 8-111 246-342 (365)
24 2pbi_B Guanine nucleotide-bind 99.8 1.8E-18 6.2E-23 108.5 11.7 101 1-111 214-314 (354)
25 4g56_B MGC81050 protein; prote 99.8 4.7E-19 1.6E-23 111.3 8.6 99 2-111 110-212 (357)
26 1erj_A Transcriptional repress 99.8 2.5E-18 8.4E-23 109.1 11.8 99 1-111 139-237 (393)
27 4ery_A WD repeat-containing pr 99.8 3.4E-18 1.2E-22 105.1 11.9 99 1-111 39-137 (312)
28 4ery_A WD repeat-containing pr 99.8 4E-18 1.4E-22 104.8 11.9 99 1-111 81-179 (312)
29 3iz6_a 40S ribosomal protein R 99.8 2E-18 7E-23 109.0 10.8 103 1-111 265-374 (380)
30 3fm0_A Protein CIAO1; WDR39,SG 99.8 2E-18 6.9E-23 107.8 10.2 101 1-110 77-179 (345)
31 3k26_A Polycomb protein EED; W 99.8 7.2E-18 2.5E-22 104.8 12.2 102 1-111 89-191 (366)
32 3vl1_A 26S proteasome regulato 99.8 4.4E-18 1.5E-22 107.9 11.3 99 1-111 113-211 (420)
33 3bg1_A Protein SEC13 homolog; 99.8 4.3E-18 1.5E-22 105.3 10.7 101 1-110 183-291 (316)
34 2pm7_B Protein transport prote 99.8 2.9E-18 1E-22 105.2 9.7 101 1-111 25-131 (297)
35 3dm0_A Maltose-binding peripla 99.8 6.8E-18 2.3E-22 113.4 12.2 60 2-61 536-595 (694)
36 3bg1_A Protein SEC13 homolog; 99.8 2.7E-18 9.2E-23 106.2 8.9 100 1-111 29-135 (316)
37 3fm0_A Protein CIAO1; WDR39,SG 99.8 8.2E-18 2.8E-22 105.1 10.9 101 1-111 32-135 (345)
38 3dm0_A Maltose-binding peripla 99.8 7.2E-18 2.5E-22 113.3 11.0 103 1-111 446-549 (694)
39 4aow_A Guanine nucleotide-bind 99.8 2.2E-17 7.4E-22 101.9 12.2 96 2-111 190-285 (340)
40 3vl1_A 26S proteasome regulato 99.8 4.2E-18 1.4E-22 108.0 8.7 103 1-111 155-277 (420)
41 1nr0_A Actin interacting prote 99.8 1.8E-17 6.2E-22 110.2 12.0 103 1-111 206-354 (611)
42 3lrv_A PRE-mRNA-splicing facto 99.8 7.9E-18 2.7E-22 104.9 9.7 99 2-111 144-243 (343)
43 2ymu_A WD-40 repeat protein; u 99.8 9.5E-18 3.3E-22 110.0 10.4 95 1-109 483-577 (577)
44 2hes_X YDR267CP; beta-propelle 99.8 1.2E-17 4.1E-22 103.8 10.1 99 1-110 123-228 (330)
45 2pm7_B Protein transport prote 99.8 2.2E-17 7.6E-22 101.3 11.1 103 1-111 117-237 (297)
46 2aq5_A Coronin-1A; WD40 repeat 99.7 1.3E-17 4.5E-22 105.7 10.3 101 1-111 98-206 (402)
47 4e54_B DNA damage-binding prot 99.7 1.4E-17 4.9E-22 106.7 10.0 101 1-111 136-239 (435)
48 3gre_A Serine/threonine-protei 99.7 4E-17 1.4E-21 104.2 11.5 100 2-111 187-291 (437)
49 2ymu_A WD-40 repeat protein; u 99.7 6.4E-17 2.2E-21 106.1 12.4 96 1-110 32-127 (577)
50 3mmy_A MRNA export factor; mRN 99.7 5E-17 1.7E-21 100.9 11.4 98 1-111 58-159 (368)
51 3odt_A Protein DOA1; ubiquitin 99.7 1.1E-16 3.7E-21 97.8 11.9 96 2-111 200-295 (313)
52 3v7d_B Cell division control p 99.7 8.9E-17 3.1E-21 103.2 12.1 99 1-111 136-235 (464)
53 1sq9_A Antiviral protein SKI8; 99.7 5.5E-17 1.9E-21 102.1 10.6 103 2-111 250-394 (397)
54 2oaj_A Protein SNI1; WD40 repe 99.7 1.5E-17 5.3E-22 114.8 8.6 102 1-111 451-604 (902)
55 4ggc_A P55CDC, cell division c 99.7 1.7E-16 5.8E-21 97.2 12.2 100 4-111 42-180 (318)
56 3f3f_A Nucleoporin SEH1; struc 99.7 9.6E-17 3.3E-21 98.7 11.1 102 1-111 27-142 (351)
57 3dwl_C Actin-related protein 2 99.7 5.4E-18 1.8E-22 106.3 5.5 99 1-111 27-130 (377)
58 3i2n_A WD repeat-containing pr 99.7 1.3E-17 4.5E-22 103.4 7.1 102 2-111 229-352 (357)
59 2j04_B YDR362CP, TAU91; beta p 99.7 1.9E-17 6.4E-22 108.9 8.2 100 1-111 281-385 (524)
60 2j04_B YDR362CP, TAU91; beta p 99.7 4.5E-18 1.5E-22 111.8 5.3 98 1-110 327-426 (524)
61 4aez_A CDC20, WD repeat-contai 99.7 1.1E-16 3.8E-21 101.5 11.2 101 2-111 191-292 (401)
62 3lrv_A PRE-mRNA-splicing facto 99.7 6.8E-17 2.3E-21 100.7 9.9 101 1-110 186-290 (343)
63 2aq5_A Coronin-1A; WD40 repeat 99.7 5.8E-17 2E-21 102.7 9.7 103 2-111 52-162 (402)
64 4e54_B DNA damage-binding prot 99.7 1.7E-17 5.8E-22 106.3 7.3 101 1-111 225-326 (435)
65 1erj_A Transcriptional repress 99.7 1.8E-16 6.1E-21 100.5 11.5 100 1-111 272-388 (393)
66 3dwl_C Actin-related protein 2 99.7 3E-17 1E-21 102.9 7.8 102 1-110 71-175 (377)
67 4h5i_A Guanine nucleotide-exch 99.7 1.5E-16 5E-21 100.3 10.8 55 2-58 152-206 (365)
68 1pgu_A Actin interacting prote 99.7 7.2E-17 2.5E-21 106.2 9.5 98 1-111 504-613 (615)
69 2pm9_A Protein WEB1, protein t 99.7 6.8E-17 2.3E-21 102.1 9.0 99 2-111 232-336 (416)
70 3f3f_A Nucleoporin SEH1; struc 99.7 1.9E-16 6.6E-21 97.3 10.8 59 1-59 75-144 (351)
71 3zwl_B Eukaryotic translation 99.7 4.2E-16 1.4E-20 96.8 12.2 103 1-111 48-150 (369)
72 2oaj_A Protein SNI1; WD40 repe 99.7 1.1E-16 3.9E-21 110.5 10.1 101 1-110 504-659 (902)
73 3ei3_B DNA damage-binding prot 99.7 1.8E-16 6.2E-21 99.7 10.3 96 2-111 180-281 (383)
74 1sq9_A Antiviral protein SKI8; 99.7 3.4E-16 1.1E-20 98.5 11.3 102 2-111 202-321 (397)
75 3mkq_A Coatomer beta'-subunit; 99.7 2.4E-16 8.1E-21 106.9 11.2 99 1-111 29-127 (814)
76 4gga_A P55CDC, cell division c 99.7 3.6E-16 1.2E-20 99.8 11.4 95 3-110 297-393 (420)
77 2xyi_A Probable histone-bindin 99.7 1.6E-16 5.5E-21 101.8 9.9 100 1-111 198-308 (430)
78 3sfz_A APAF-1, apoptotic pepti 99.7 2.7E-16 9.4E-21 110.7 11.5 100 1-111 631-731 (1249)
79 4gq1_A NUP37; propeller, trans 99.7 1.5E-16 5.1E-21 101.0 9.3 103 1-111 160-285 (393)
80 2xyi_A Probable histone-bindin 99.7 1.6E-16 5.5E-21 101.8 9.4 99 2-111 249-352 (430)
81 2pm9_A Protein WEB1, protein t 99.7 8E-17 2.7E-21 101.8 7.9 103 1-111 83-196 (416)
82 3jrp_A Fusion protein of prote 99.7 1.7E-16 5.7E-21 99.0 9.0 99 1-111 27-133 (379)
83 3jrp_A Fusion protein of prote 99.7 7.3E-16 2.5E-20 96.1 11.4 102 2-111 120-239 (379)
84 3zwl_B Eukaryotic translation 99.7 2.5E-15 8.7E-20 93.3 13.4 59 2-60 192-251 (369)
85 3v7d_B Cell division control p 99.7 6.5E-16 2.2E-20 99.2 10.8 96 2-111 285-380 (464)
86 3dw8_B Serine/threonine-protei 99.7 5.7E-16 1.9E-20 98.8 10.3 98 5-111 196-314 (447)
87 1gxr_A ESG1, transducin-like e 99.7 1.7E-15 5.8E-20 93.1 12.1 97 2-111 158-254 (337)
88 1k8k_C P40, ARP2/3 complex 41 99.7 5.5E-16 1.9E-20 96.7 9.9 100 2-111 25-126 (372)
89 3mkq_A Coatomer beta'-subunit; 99.7 7.9E-16 2.7E-20 104.3 11.3 101 1-111 71-171 (814)
90 2oit_A Nucleoporin 214KDA; NH2 99.7 2.9E-16 9.9E-21 101.1 8.6 98 2-111 113-222 (434)
91 1r5m_A SIR4-interacting protei 99.7 4.2E-16 1.4E-20 98.4 8.9 99 2-111 305-424 (425)
92 1gxr_A ESG1, transducin-like e 99.7 2.6E-15 8.9E-20 92.3 12.0 98 2-111 114-213 (337)
93 3gre_A Serine/threonine-protei 99.7 3E-16 1E-20 100.2 7.9 102 1-111 230-358 (437)
94 3dw8_B Serine/threonine-protei 99.7 3E-16 1E-20 100.1 7.5 101 2-111 112-257 (447)
95 3ei3_B DNA damage-binding prot 99.7 2.2E-15 7.7E-20 94.7 11.4 98 1-111 135-235 (383)
96 4gga_A P55CDC, cell division c 99.7 1.8E-15 6.1E-20 96.6 11.1 93 5-111 123-217 (420)
97 4aow_A Guanine nucleotide-bind 99.7 2.4E-15 8.2E-20 92.8 11.0 99 1-111 55-158 (340)
98 3k26_A Polycomb protein EED; W 99.6 1.3E-15 4.6E-20 94.5 9.7 98 2-111 39-146 (366)
99 2j04_A TAU60, YPL007P, hypothe 99.6 8.4E-16 2.9E-20 101.5 9.1 97 1-111 101-210 (588)
100 4ggc_A P55CDC, cell division c 99.6 3.5E-15 1.2E-19 91.3 11.3 97 2-111 216-314 (318)
101 1k8k_C P40, ARP2/3 complex 41 99.6 1.6E-15 5.4E-20 94.6 9.7 97 2-111 159-273 (372)
102 3vu4_A KMHSV2; beta-propeller 99.6 2.6E-15 9E-20 94.2 10.7 102 1-110 211-334 (355)
103 4a11_B DNA excision repair pro 99.6 2.1E-15 7.3E-20 94.8 10.3 102 2-111 161-275 (408)
104 3jro_A Fusion protein of prote 99.6 1.1E-15 3.7E-20 103.9 9.4 101 1-111 25-131 (753)
105 2vdu_B TRNA (guanine-N(7)-)-me 99.6 3.2E-15 1.1E-19 96.1 11.0 102 1-111 119-228 (450)
106 1r5m_A SIR4-interacting protei 99.6 3.5E-15 1.2E-19 94.1 10.8 97 2-111 264-360 (425)
107 2vdu_B TRNA (guanine-N(7)-)-me 99.6 4.6E-15 1.6E-19 95.4 11.1 102 1-110 214-337 (450)
108 4aez_A CDC20, WD repeat-contai 99.6 6.2E-15 2.1E-19 93.5 11.1 100 1-111 233-335 (401)
109 3i2n_A WD repeat-containing pr 99.6 2.9E-15 9.8E-20 92.9 9.1 103 1-111 84-198 (357)
110 3sfz_A APAF-1, apoptotic pepti 99.6 6.5E-15 2.2E-19 103.8 11.8 99 1-111 673-773 (1249)
111 1pgu_A Actin interacting prote 99.6 9.5E-15 3.3E-19 96.1 11.6 101 2-111 178-282 (615)
112 2w18_A PALB2, fancn, partner a 99.6 6.9E-15 2.4E-19 92.2 10.3 107 4-111 154-268 (356)
113 1p22_A F-BOX/WD-repeat protein 99.6 9E-15 3.1E-19 93.6 10.7 95 1-111 147-241 (435)
114 1yfq_A Cell cycle arrest prote 99.6 3.9E-15 1.3E-19 92.0 8.5 98 1-111 27-130 (342)
115 1l0q_A Surface layer protein; 99.6 3E-14 1E-18 89.6 11.9 97 2-111 7-104 (391)
116 3odt_A Protein DOA1; ubiquitin 99.6 8.3E-15 2.9E-19 89.3 8.9 98 1-109 33-130 (313)
117 3jro_A Fusion protein of prote 99.6 1.2E-14 4.2E-19 98.8 10.2 102 2-111 118-237 (753)
118 2oit_A Nucleoporin 214KDA; NH2 99.6 3.3E-14 1.1E-18 91.6 10.8 109 1-111 166-277 (434)
119 4a11_B DNA excision repair pro 99.6 3.6E-14 1.2E-18 89.2 10.7 98 2-111 117-217 (408)
120 2j04_A TAU60, YPL007P, hypothe 99.6 2.3E-14 7.7E-19 94.8 9.1 98 1-111 145-253 (588)
121 2ovr_B FBW7, F-BOX/WD repeat p 99.6 4.4E-14 1.5E-18 90.5 10.3 95 1-111 133-227 (445)
122 3bws_A Protein LP49; two-domai 99.6 5.4E-14 1.8E-18 89.5 10.3 99 2-111 139-242 (433)
123 1p22_A F-BOX/WD-repeat protein 99.6 3.3E-14 1.1E-18 91.0 9.4 98 1-111 187-284 (435)
124 3mmy_A MRNA export factor; mRN 99.5 1.9E-13 6.4E-18 84.8 11.9 93 8-111 20-116 (368)
125 1yfq_A Cell cycle arrest prote 99.5 1.1E-13 3.9E-18 85.4 10.4 99 2-111 165-281 (342)
126 1l0q_A Surface layer protein; 99.5 4.9E-13 1.7E-17 84.1 12.8 97 2-111 49-146 (391)
127 2ovr_B FBW7, F-BOX/WD repeat p 99.5 1.3E-13 4.5E-18 88.3 9.8 54 3-58 175-228 (445)
128 3bws_A Protein LP49; two-domai 99.5 1.6E-12 5.6E-17 82.7 13.5 105 2-111 186-291 (433)
129 2hqs_A Protein TOLB; TOLB, PAL 99.4 1.4E-11 4.8E-16 78.8 12.5 92 7-111 159-255 (415)
130 1nir_A Nitrite reductase; hemo 99.4 1.9E-11 6.4E-16 80.8 12.6 96 2-110 154-255 (543)
131 2ojh_A Uncharacterized protein 99.3 5.9E-11 2E-15 71.4 9.7 85 3-92 18-103 (297)
132 2hqs_A Protein TOLB; TOLB, PAL 99.2 2.8E-10 9.5E-15 72.9 12.4 91 7-110 203-298 (415)
133 3u4y_A Uncharacterized protein 99.2 5.7E-10 2E-14 68.7 12.4 98 2-111 15-116 (331)
134 1ri6_A Putative isomerase YBHE 99.2 5.1E-10 1.8E-14 68.9 11.0 97 3-110 11-113 (343)
135 3vgz_A Uncharacterized protein 99.2 6.7E-10 2.3E-14 68.7 10.7 100 5-111 162-261 (353)
136 1ri6_A Putative isomerase YBHE 99.2 2.7E-10 9.1E-15 70.2 8.7 99 4-110 103-207 (343)
137 1z68_A Fibroblast activation p 99.2 7.6E-11 2.6E-15 79.5 6.6 93 4-110 33-137 (719)
138 1xfd_A DIP, dipeptidyl aminope 99.1 1.9E-10 6.5E-15 77.5 7.9 97 3-110 33-141 (723)
139 3hfq_A Uncharacterized protein 99.1 1.2E-09 4.1E-14 67.8 10.4 98 6-111 62-170 (347)
140 3u4y_A Uncharacterized protein 99.1 1.1E-09 3.9E-14 67.3 9.4 95 4-110 59-158 (331)
141 3hfq_A Uncharacterized protein 99.1 2.7E-09 9.1E-14 66.3 10.9 98 5-110 106-216 (347)
142 2ecf_A Dipeptidyl peptidase IV 99.1 9.5E-10 3.3E-14 74.4 9.2 89 8-111 65-180 (741)
143 1nir_A Nitrite reductase; hemo 99.1 5.7E-09 1.9E-13 69.1 12.6 101 2-110 195-309 (543)
144 3o4h_A Acylamino-acid-releasin 99.1 5.2E-10 1.8E-14 74.0 7.7 95 7-110 175-274 (582)
145 3vgz_A Uncharacterized protein 99.1 9.3E-09 3.2E-13 63.6 12.3 96 3-111 202-302 (353)
146 1jmx_B Amine dehydrogenase; ox 99.1 2.6E-09 8.9E-14 65.9 9.7 109 2-111 16-133 (349)
147 1k32_A Tricorn protease; prote 99.0 5.2E-09 1.8E-13 73.6 11.3 101 6-111 357-460 (1045)
148 3scy_A Hypothetical bacterial 99.0 8E-09 2.7E-13 64.5 11.0 97 4-110 230-335 (361)
149 1pby_B Quinohemoprotein amine 99.0 4.9E-09 1.7E-13 64.3 9.9 110 2-111 6-123 (337)
150 3scy_A Hypothetical bacterial 99.0 1.9E-08 6.3E-13 62.9 11.3 99 4-110 174-289 (361)
151 1jof_A Carboxy-CIS,CIS-muconat 98.9 7.7E-08 2.6E-12 60.4 13.5 98 5-110 117-222 (365)
152 2oiz_A Aromatic amine dehydrog 98.9 2.2E-08 7.6E-13 63.1 10.7 99 5-111 29-139 (361)
153 2ojh_A Uncharacterized protein 98.9 1.4E-08 4.6E-13 61.0 9.4 93 5-110 60-158 (297)
154 1pby_B Quinohemoprotein amine 98.9 5.4E-08 1.9E-12 59.7 12.1 89 8-111 220-309 (337)
155 3o4h_A Acylamino-acid-releasin 98.9 1E-08 3.5E-13 67.9 8.4 91 5-111 130-226 (582)
156 1k32_A Tricorn protease; prote 98.8 1.4E-08 4.9E-13 71.4 8.4 86 2-92 395-490 (1045)
157 4a5s_A Dipeptidyl peptidase 4 98.8 9.8E-09 3.4E-13 69.9 6.0 91 6-110 35-139 (740)
158 2ecf_A Dipeptidyl peptidase IV 98.8 7.7E-08 2.6E-12 65.1 10.0 85 7-92 129-227 (741)
159 1xfd_A DIP, dipeptidyl aminope 98.8 2.3E-08 7.7E-13 67.5 7.4 88 5-94 89-193 (723)
160 2z3z_A Dipeptidyl aminopeptida 98.8 7.7E-08 2.6E-12 64.9 9.3 103 4-111 138-292 (706)
161 1jmx_B Amine dehydrogenase; ox 98.8 3.2E-08 1.1E-12 61.0 6.9 95 3-110 61-173 (349)
162 2z3z_A Dipeptidyl aminopeptida 98.7 1.1E-07 3.8E-12 64.1 9.6 98 5-110 233-340 (706)
163 1qks_A Cytochrome CD1 nitrite 98.7 6.8E-07 2.3E-11 59.7 12.6 95 3-110 173-273 (567)
164 1jof_A Carboxy-CIS,CIS-muconat 98.7 8.1E-07 2.8E-11 55.8 12.0 104 5-110 165-289 (365)
165 1q7f_A NHL, brain tumor CG1071 98.7 1E-06 3.4E-11 53.3 11.4 94 4-110 182-278 (286)
166 1z68_A Fibroblast activation p 98.7 2E-07 6.9E-12 63.0 9.0 86 5-94 88-189 (719)
167 1xip_A Nucleoporin NUP159; bet 98.6 5.6E-07 1.9E-11 57.6 9.9 86 5-110 104-189 (388)
168 4a5s_A Dipeptidyl peptidase 4 98.6 2.8E-07 9.5E-12 62.9 7.5 84 7-92 92-189 (740)
169 3fvz_A Peptidyl-glycine alpha- 98.5 4.9E-07 1.7E-11 56.1 7.6 97 4-110 215-320 (329)
170 2gop_A Trilobed protease; beta 98.5 4.4E-06 1.5E-10 51.6 10.9 77 5-92 41-122 (347)
171 3fvz_A Peptidyl-glycine alpha- 98.5 9.2E-06 3.1E-10 50.4 12.3 99 4-110 109-225 (329)
172 2oiz_A Aromatic amine dehydrog 98.4 2.6E-06 8.7E-11 53.7 9.1 74 6-86 285-360 (361)
173 3pe7_A Oligogalacturonate lyas 98.4 3.2E-06 1.1E-10 53.0 9.4 90 10-111 13-110 (388)
174 3azo_A Aminopeptidase; POP fam 98.4 6.4E-06 2.2E-10 55.2 10.8 93 7-108 217-319 (662)
175 3no2_A Uncharacterized protein 98.4 1E-05 3.5E-10 49.3 10.7 84 2-91 10-94 (276)
176 1rwi_B Serine/threonine-protei 98.4 1.7E-05 5.7E-10 47.4 11.2 96 4-111 168-263 (270)
177 3azo_A Aminopeptidase; POP fam 98.4 2.4E-06 8.3E-11 57.3 8.2 102 6-111 101-225 (662)
178 1q7f_A NHL, brain tumor CG1071 98.4 2.4E-05 8.4E-10 47.2 11.9 93 6-110 99-192 (286)
179 3e5z_A Putative gluconolactona 98.3 1.3E-05 4.4E-10 48.8 10.5 86 3-90 46-131 (296)
180 2dg1_A DRP35, lactonase; beta 98.3 6.2E-05 2.1E-09 46.3 13.5 86 4-91 63-152 (333)
181 2dg1_A DRP35, lactonase; beta 98.3 2.7E-05 9.3E-10 47.9 11.7 96 4-110 24-119 (333)
182 1pjx_A Dfpase, DIISOPROPYLFLUO 98.3 3.2E-05 1.1E-09 47.1 11.2 95 5-110 196-297 (314)
183 1xip_A Nucleoporin NUP159; bet 98.3 3.6E-06 1.2E-10 53.8 7.1 53 2-60 141-193 (388)
184 3pe7_A Oligogalacturonate lyas 98.3 2.5E-05 8.4E-10 49.0 10.7 55 8-62 61-115 (388)
185 2xdw_A Prolyl endopeptidase; a 98.2 2.2E-05 7.7E-10 53.3 10.2 96 8-110 152-266 (710)
186 3dsm_A Uncharacterized protein 98.2 4.9E-05 1.7E-09 47.2 10.9 98 3-111 60-160 (328)
187 3sjl_D Methylamine dehydrogena 98.1 4.6E-05 1.6E-09 48.8 10.0 98 6-111 58-168 (386)
188 3dsm_A Uncharacterized protein 98.1 4.5E-05 1.5E-09 47.4 9.7 92 5-110 150-251 (328)
189 2mad_H Methylamine dehydrogena 98.0 0.00022 7.4E-09 45.3 11.5 93 8-109 48-154 (373)
190 3e5z_A Putative gluconolactona 98.0 0.0002 6.7E-09 43.5 10.3 89 8-110 154-244 (296)
191 3c5m_A Oligogalacturonate lyas 98.0 0.00014 4.7E-09 45.5 9.7 96 7-110 216-327 (396)
192 2bkl_A Prolyl endopeptidase; m 97.9 4.6E-05 1.6E-09 51.7 7.6 84 4-92 144-245 (695)
193 1mda_H Methylamine dehydrogena 97.9 7.3E-05 2.5E-09 47.6 8.1 91 8-110 47-156 (368)
194 2gop_A Trilobed protease; beta 97.9 0.00026 8.7E-09 43.7 10.5 75 8-91 86-187 (347)
195 1rwi_B Serine/threonine-protei 97.9 0.00033 1.1E-08 41.7 10.5 92 6-110 86-178 (270)
196 3c75_H MADH, methylamine dehyd 97.9 0.00016 5.5E-09 46.9 9.1 97 7-111 99-208 (426)
197 3c5m_A Oligogalacturonate lyas 97.9 0.00033 1.1E-08 43.7 10.2 83 7-92 264-369 (396)
198 1qks_A Cytochrome CD1 nitrite 97.8 0.0013 4.3E-08 44.2 13.1 59 3-62 214-279 (567)
199 2bkl_A Prolyl endopeptidase; m 97.8 5.9E-05 2E-09 51.2 6.9 80 26-110 119-209 (695)
200 2xdw_A Prolyl endopeptidase; a 97.8 0.00035 1.2E-08 47.6 9.6 80 26-110 123-215 (710)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 97.7 0.0021 7.2E-08 39.0 11.7 87 3-91 42-134 (314)
202 3no2_A Uncharacterized protein 97.7 0.002 6.8E-08 39.2 11.1 95 5-110 54-153 (276)
203 3hrp_A Uncharacterized protein 97.6 0.00083 2.8E-08 43.1 9.2 96 5-110 150-247 (409)
204 3g4e_A Regucalcin; six bladed 97.5 0.0017 5.9E-08 39.5 9.7 86 4-93 168-261 (297)
205 2qe8_A Uncharacterized protein 97.5 0.0017 5.6E-08 40.5 9.2 77 26-110 65-152 (343)
206 1yr2_A Prolyl oligopeptidase; 97.4 0.0012 4E-08 45.3 8.5 97 7-110 189-301 (741)
207 3g4e_A Regucalcin; six bladed 97.4 0.0068 2.3E-07 36.9 12.4 93 6-110 72-178 (297)
208 2iwa_A Glutamine cyclotransfer 97.4 0.007 2.4E-07 36.9 11.1 98 4-110 123-235 (266)
209 2z2n_A Virginiamycin B lyase; 97.4 0.0077 2.6E-07 36.1 11.3 93 5-110 118-211 (299)
210 2hz6_A Endoplasmic reticulum t 97.3 0.00031 1.1E-08 44.4 4.6 56 2-61 97-152 (369)
211 2ece_A 462AA long hypothetical 97.3 0.013 4.4E-07 38.5 11.9 99 5-110 226-350 (462)
212 3hrp_A Uncharacterized protein 97.3 0.014 4.7E-07 37.5 12.4 76 28-111 323-409 (409)
213 2z2n_A Virginiamycin B lyase; 97.3 0.0098 3.3E-07 35.6 11.9 93 5-110 160-253 (299)
214 3dr2_A Exported gluconolactona 97.3 0.0069 2.3E-07 37.0 10.0 82 5-89 65-146 (305)
215 2mad_H Methylamine dehydrogena 97.3 0.0088 3E-07 38.0 10.6 58 5-63 95-161 (373)
216 1yr2_A Prolyl oligopeptidase; 97.2 0.0025 8.6E-08 43.7 8.4 78 27-110 162-250 (741)
217 3iuj_A Prolyl endopeptidase; h 97.2 0.0042 1.4E-07 42.4 9.0 96 5-110 153-266 (693)
218 2hz6_A Endoplasmic reticulum t 97.1 0.00012 4E-09 46.3 1.1 58 2-61 14-71 (369)
219 2ghs_A AGR_C_1268P; regucalcin 97.0 0.022 7.6E-07 35.2 12.5 89 8-110 110-208 (326)
220 3iuj_A Prolyl endopeptidase; h 97.0 0.0039 1.3E-07 42.6 7.7 79 26-110 127-215 (693)
221 2ece_A 462AA long hypothetical 96.9 0.025 8.6E-07 37.2 10.4 85 5-92 162-271 (462)
222 1yiq_A Quinohemoprotein alcoho 96.9 0.005 1.7E-07 42.2 7.4 84 5-92 453-536 (689)
223 3dr2_A Exported gluconolactona 96.9 0.03 1E-06 34.2 10.9 51 7-59 169-225 (305)
224 3nol_A Glutamine cyclotransfer 96.9 0.03 1E-06 34.1 10.6 87 5-92 144-243 (262)
225 1fwx_A Nitrous oxide reductase 96.8 0.011 3.8E-07 40.0 8.5 95 7-110 254-359 (595)
226 3sjl_D Methylamine dehydrogena 96.8 0.0089 3.1E-07 38.4 7.6 58 6-63 108-174 (386)
227 2qc5_A Streptogramin B lactona 96.8 0.032 1.1E-06 33.3 12.0 91 6-109 82-173 (300)
228 2qc5_A Streptogramin B lactona 96.7 0.036 1.2E-06 33.1 11.9 92 6-110 166-258 (300)
229 1mda_H Methylamine dehydrogena 96.7 0.026 9E-07 35.9 9.3 67 33-111 269-345 (368)
230 3nok_A Glutaminyl cyclase; bet 96.7 0.044 1.5E-06 33.5 9.8 87 5-92 153-253 (268)
231 2qe8_A Uncharacterized protein 96.7 0.049 1.7E-06 33.9 11.0 87 6-92 92-213 (343)
232 3nok_A Glutaminyl cyclase; bet 96.6 0.047 1.6E-06 33.4 9.2 92 3-110 71-162 (268)
233 3mbr_X Glutamine cyclotransfer 96.5 0.053 1.8E-06 32.6 10.2 89 3-92 120-222 (243)
234 1kb0_A Quinohemoprotein alcoho 96.5 0.026 9E-07 38.7 8.8 82 6-91 456-537 (677)
235 1fwx_A Nitrous oxide reductase 96.5 0.06 2E-06 36.6 9.9 101 3-111 171-307 (595)
236 2ghs_A AGR_C_1268P; regucalcin 96.4 0.069 2.4E-06 33.0 11.6 82 6-92 200-290 (326)
237 2p9w_A MAL S 1 allergenic prot 96.1 0.12 4.1E-06 32.6 10.7 98 6-111 99-214 (334)
238 1kb0_A Quinohemoprotein alcoho 96.1 0.07 2.4E-06 36.6 8.9 22 3-24 333-354 (677)
239 3pbp_A Nucleoporin NUP82; beta 96.1 0.14 4.7E-06 33.6 9.7 97 6-111 40-157 (452)
240 2iwa_A Glutamine cyclotransfer 95.9 0.14 4.7E-06 31.2 10.0 97 2-110 81-179 (266)
241 1npe_A Nidogen, entactin; glyc 95.7 0.15 5.1E-06 30.4 11.8 94 6-110 100-196 (267)
242 3c75_H MADH, methylamine dehyd 95.7 0.06 2.1E-06 35.0 7.1 57 6-63 349-407 (426)
243 3nol_A Glutamine cyclotransfer 95.2 0.27 9.2E-06 30.0 9.3 58 3-63 103-160 (262)
244 2fp8_A Strictosidine synthase; 95.1 0.29 9.9E-06 30.0 11.9 70 29-110 127-214 (322)
245 1npe_A Nidogen, entactin; glyc 94.6 0.36 1.2E-05 28.6 12.0 83 6-92 57-140 (267)
246 3tc9_A Hypothetical hydrolase; 94.5 0.57 1.9E-05 30.3 9.4 71 30-110 228-299 (430)
247 3mbr_X Glutamine cyclotransfer 94.5 0.43 1.5E-05 28.8 10.1 58 3-63 81-138 (243)
248 1kv9_A Type II quinohemoprotei 94.3 0.32 1.1E-05 33.3 7.9 59 4-63 435-493 (668)
249 1flg_A Protein (quinoprotein e 94.2 0.7 2.4E-05 31.2 9.2 84 5-92 464-547 (582)
250 3v65_B Low-density lipoprotein 93.9 0.74 2.5E-05 29.3 11.8 93 7-110 181-275 (386)
251 3v64_C Agrin; beta propeller, 93.8 0.71 2.4E-05 28.9 12.0 72 28-110 159-232 (349)
252 3sre_A PON1, serum paraoxonase 93.8 0.75 2.6E-05 29.2 10.4 69 28-110 165-250 (355)
253 3hxj_A Pyrrolo-quinoline quino 93.7 0.64 2.2E-05 28.1 8.3 51 4-59 154-204 (330)
254 2xe4_A Oligopeptidase B; hydro 93.5 0.53 1.8E-05 32.7 7.8 58 29-92 175-239 (751)
255 1ijq_A LDL receptor, low-densi 93.4 0.81 2.8E-05 28.2 12.7 72 28-110 120-193 (316)
256 1n7d_A LDL receptor, low-densi 93.0 0.47 1.6E-05 32.8 6.9 71 29-110 497-569 (699)
257 2ad6_A Methanol dehydrogenase 92.9 0.61 2.1E-05 31.4 7.2 58 5-63 442-499 (571)
258 3q7m_A Lipoprotein YFGL, BAMB; 92.4 1.1 3.8E-05 27.9 7.7 58 4-63 284-342 (376)
259 4hw6_A Hypothetical protein, I 92.1 1.5 5E-05 28.5 8.0 71 30-109 230-301 (433)
260 2xe4_A Oligopeptidase B; hydro 91.9 1.5 5E-05 30.5 8.2 92 7-110 201-302 (751)
261 4gq2_M Nucleoporin NUP120; bet 91.8 2.7 9.2E-05 30.3 9.7 35 29-63 237-271 (950)
262 2ism_A Putative oxidoreductase 91.7 1.6 5.4E-05 27.4 9.2 62 28-92 31-96 (352)
263 1k3i_A Galactose oxidase precu 91.0 2.6 8.9E-05 28.7 10.3 52 8-59 220-275 (656)
264 3hxj_A Pyrrolo-quinoline quino 90.8 1.7 5.8E-05 26.2 8.7 52 4-57 114-165 (330)
265 3m0c_C LDL receptor, low-densi 90.7 3.3 0.00011 29.3 10.7 78 26-110 422-500 (791)
266 3sov_A LRP-6, low-density lipo 90.4 2.1 7.1E-05 26.5 10.1 94 7-110 13-108 (318)
267 1ijq_A LDL receptor, low-densi 89.7 2.3 8E-05 26.1 10.6 92 7-110 10-106 (316)
268 3p5b_L Low density lipoprotein 89.7 2.7 9.4E-05 26.9 10.6 51 7-58 92-143 (400)
269 3v64_C Agrin; beta propeller, 89.6 2.6 8.9E-05 26.4 10.9 60 29-92 117-177 (349)
270 1yiq_A Quinohemoprotein alcoho 89.4 3.9 0.00013 28.2 10.0 58 5-62 181-288 (689)
271 2p4o_A Hypothetical protein; p 88.9 2.6 9E-05 25.6 12.7 67 17-90 22-88 (306)
272 3tc9_A Hypothetical hydrolase; 88.8 3.4 0.00012 26.7 10.1 92 7-110 159-255 (430)
273 3sov_A LRP-6, low-density lipo 88.8 2.9 9.9E-05 25.9 11.9 73 27-110 121-195 (318)
274 3m0c_C LDL receptor, low-densi 88.7 4.9 0.00017 28.5 12.8 93 7-110 493-587 (791)
275 3sbq_A Nitrous-oxide reductase 88.7 4.5 0.00015 27.9 8.8 93 8-110 299-406 (638)
276 1tl2_A L10, protein (tachylect 88.6 2.6 8.9E-05 25.3 6.3 60 29-90 42-104 (236)
277 1w6s_A Methanol dehydrogenase 88.5 3.5 0.00012 28.1 7.6 84 5-92 451-534 (599)
278 3v65_B Low-density lipoprotein 88.3 3.5 0.00012 26.2 11.3 80 8-92 97-177 (386)
279 2ad6_A Methanol dehydrogenase 88.1 4.5 0.00015 27.3 9.5 22 3-24 322-343 (571)
280 3p5b_L Low density lipoprotein 87.8 3.8 0.00013 26.2 13.2 93 7-110 181-275 (400)
281 3das_A Putative oxidoreductase 86.8 4.4 0.00015 25.7 10.6 64 27-90 31-99 (347)
282 3amr_A 3-phytase; beta-propell 85.9 5 0.00017 25.6 11.0 97 4-110 150-261 (355)
283 2p9w_A MAL S 1 allergenic prot 85.3 5.3 0.00018 25.3 9.7 89 2-90 30-153 (334)
284 3kya_A Putative phosphatase; s 85.1 6.6 0.00023 26.3 7.9 73 30-109 249-338 (496)
285 3q7m_A Lipoprotein YFGL, BAMB; 84.8 5.2 0.00018 24.8 10.6 58 4-62 60-126 (376)
286 1tl2_A L10, protein (tachylect 84.8 4.7 0.00016 24.3 6.8 59 31-91 91-152 (236)
287 1k3i_A Galactose oxidase precu 83.8 8.2 0.00028 26.3 8.0 71 32-110 190-272 (656)
288 3a9g_A Putative uncharacterize 82.4 7.1 0.00024 24.5 10.0 63 28-92 29-94 (354)
289 3f7f_A Nucleoporin NUP120; nuc 82.2 4.4 0.00015 28.5 5.8 34 28-63 222-255 (729)
290 4fhn_B Nucleoporin NUP120; pro 81.0 1.6 5.4E-05 32.0 3.5 34 30-63 240-273 (1139)
291 1n7d_A LDL receptor, low-densi 80.6 2.7 9.3E-05 29.1 4.5 31 28-58 406-437 (699)
292 4a2l_A BT_4663, two-component 79.0 14 0.00048 25.8 12.1 86 5-90 375-468 (795)
293 1kv9_A Type II quinohemoprotei 78.7 14 0.00046 25.5 10.0 58 5-62 176-283 (668)
294 2g8s_A Glucose/sorbosone dehyd 78.6 9.8 0.00034 23.8 8.9 63 28-91 18-86 (353)
295 2xzh_A Clathrin heavy chain 1; 78.4 11 0.00037 24.2 6.6 56 5-60 279-334 (365)
296 2p4o_A Hypothetical protein; p 78.2 9 0.00031 23.2 7.8 60 30-92 214-276 (306)
297 3pbp_A Nucleoporin NUP82; beta 77.9 5 0.00017 26.6 4.8 32 27-58 124-158 (452)
298 3s94_A LRP-6, low-density lipo 77.4 15 0.0005 25.2 10.7 94 7-110 18-113 (619)
299 1cru_A Protein (soluble quinop 76.8 13 0.00045 24.3 11.0 65 28-92 27-98 (454)
300 3qqz_A Putative uncharacterize 74.6 12 0.0004 22.7 9.8 40 22-62 21-61 (255)
301 2fp8_A Strictosidine synthase; 73.7 13 0.00043 22.6 12.2 62 28-90 80-143 (322)
302 4hw6_A Hypothetical protein, I 72.5 17 0.00058 23.6 8.5 74 30-111 337-432 (433)
303 3amr_A 3-phytase; beta-propell 70.5 18 0.00062 23.1 10.5 95 4-110 47-160 (355)
304 4a2l_A BT_4663, two-component 67.6 29 0.00098 24.3 11.0 83 5-90 425-514 (795)
305 3qqz_A Putative uncharacterize 66.6 19 0.00064 21.8 11.3 88 4-92 46-139 (255)
306 1bpo_A Protein (clathrin); cla 65.8 28 0.00095 23.4 7.3 55 5-59 278-332 (494)
307 2xzh_A Clathrin heavy chain 1; 64.1 26 0.0009 22.6 10.0 98 6-110 86-187 (365)
308 3a9g_A Putative uncharacterize 61.9 27 0.00091 21.9 9.1 88 5-93 47-154 (354)
309 4a9v_A PHOX; hydrolase, beta-p 56.0 48 0.0016 23.0 8.7 63 29-94 477-551 (592)
310 4a0p_A LRP6, LRP-6, low-densit 55.5 48 0.0016 22.8 12.5 71 28-110 123-195 (628)
311 3kya_A Putative phosphatase; s 54.3 46 0.0016 22.3 11.0 95 7-110 162-276 (496)
312 2ism_A Putative oxidoreductase 51.2 42 0.0014 20.9 11.8 66 27-92 74-153 (352)
313 4gq2_M Nucleoporin NUP120; bet 49.7 29 0.00099 25.3 4.5 27 77-111 239-265 (950)
314 3zwu_A Alkaline phosphatase PH 44.6 75 0.0026 21.9 8.4 61 31-94 479-551 (592)
315 3sre_A PON1, serum paraoxonase 42.9 63 0.0022 20.6 8.9 31 28-58 221-252 (355)
316 4fhn_B Nucleoporin NUP120; pro 42.9 28 0.00095 25.8 3.7 26 78-111 242-267 (1139)
317 1flg_A Protein (quinoprotein e 42.8 77 0.0026 21.5 7.6 55 7-62 291-359 (582)
318 1xi4_A Clathrin heavy chain; a 42.8 1.1E+02 0.0039 24.2 6.6 100 6-110 85-186 (1630)
319 1ukf_A Avirulence protein AVRP 41.5 48 0.0016 19.2 3.8 34 27-60 118-152 (188)
320 4a9v_A PHOX; hydrolase, beta-p 37.1 1E+02 0.0036 21.4 5.8 37 9-45 511-548 (592)
321 4a0p_A LRP6, LRP-6, low-densit 35.6 1.1E+02 0.0037 21.1 12.3 73 27-110 431-506 (628)
322 1w6s_A Methanol dehydrogenase 34.3 1.1E+02 0.0038 21.0 7.3 55 7-62 278-346 (599)
323 3v9f_A Two-component system se 33.6 1.2E+02 0.0042 21.1 10.7 62 27-90 494-555 (781)
324 3ei3_A DNA damage-binding prot 33.0 1.6E+02 0.0054 22.3 8.8 91 8-111 493-590 (1158)
325 3v9f_A Two-component system se 32.8 1.3E+02 0.0043 21.1 10.6 82 6-90 426-511 (781)
326 3zwu_A Alkaline phosphatase PH 28.9 1.5E+02 0.005 20.6 5.8 37 9-45 511-548 (592)
327 3s94_A LRP-6, low-density lipo 27.0 1.6E+02 0.0053 20.3 12.1 72 28-110 435-508 (619)
328 3mwp_A Nucleoprotein; structur 22.1 21 0.00073 23.8 0.2 12 100-111 164-175 (577)
329 2wg3_C Hedgehog-interacting pr 22.0 1.2E+02 0.004 20.1 3.7 29 28-57 14-44 (463)
330 3das_A Putative oxidoreductase 20.5 1.7E+02 0.0059 18.5 6.4 65 29-94 264-328 (347)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.87 E-value=1.4e-21 Score=122.54 Aligned_cols=98 Identities=13% Similarity=0.084 Sum_probs=81.8
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCC-cEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNG-RYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
+++.|++|++||+++++++..+.+|...|.+++|+|++ ++|++++.|++|++||++.++.... ..+ -..+++++
T Consensus 232 sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~----~~H-~~~V~~v~ 306 (344)
T 4gqb_B 232 FGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS----QAH-RDFVRDAT 306 (344)
T ss_dssp EEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE----CCC-SSCEEEEE
T ss_pred EeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE----cCC-CCCEEEEE
Confidence 56789999999999999999999999999999999997 6899999999999999988765531 111 14577889
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|++..+++++ +.|++|++|++.
T Consensus 307 ~sp~~~~llas~-------s~D~~v~~w~v~ 330 (344)
T 4gqb_B 307 WSPLNHSLLTTV-------GWDHQVVHHVVP 330 (344)
T ss_dssp ECSSSTTEEEEE-------ETTSCEEEEECC
T ss_pred EeCCCCeEEEEE-------cCCCeEEEEECC
Confidence 999988888888 899999999974
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.86 E-value=2.6e-21 Score=121.26 Aligned_cols=100 Identities=15% Similarity=0.037 Sum_probs=81.0
Q ss_pred CcccccCeeeecCCCCceeee----eeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCce
Q psy8803 1 KKSWYEEYKRLDYHTPIVETE----VLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYT 76 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~----~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 76 (111)
++++.||+|+|||+.+++.+. .+.+|.+.|.+++|+|++++|++++.|++|++||+++++.... ...+ -..+
T Consensus 97 ~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~---~~~h-~~~V 172 (344)
T 4gqb_B 97 LVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSS---YRAH-AAQV 172 (344)
T ss_dssp EEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE---ECCC-SSCE
T ss_pred EEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE---EcCc-CCce
Confidence 357889999999999876443 3458999999999999999999999999999999998776542 1111 1456
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
++++|+|++..+++++ +.|+.|++||++
T Consensus 173 ~~~~~~~~~~~~l~s~-------s~D~~v~iwd~~ 200 (344)
T 4gqb_B 173 TCVAASPHKDSVFLSC-------SEDNRILLWDTR 200 (344)
T ss_dssp EEEEECSSCTTEEEEE-------ETTSCEEEEETT
T ss_pred EEEEecCCCCCceeee-------cccccccccccc
Confidence 7788999887777777 889999999975
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.86 E-value=5e-21 Score=117.83 Aligned_cols=101 Identities=14% Similarity=0.126 Sum_probs=82.3
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++.|++|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|++|++||++........ .... -.++.+++
T Consensus 71 ~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~--~~~h-~~~v~~v~ 147 (304)
T 2ynn_A 71 IVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT--FEGH-EHFVMCVA 147 (304)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEE--ECCC-CSCEEEEE
T ss_pred EEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhh--hccc-CCcEEEEE
Confidence 36788999999999999999999999999999999999999999999999999999876433210 1111 14567888
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|.+..++++| +.|+.|++||++
T Consensus 148 ~~p~~~~~l~sg-------s~D~~v~iwd~~ 171 (304)
T 2ynn_A 148 FNPKDPSTFASG-------CLDRTVKVWSLG 171 (304)
T ss_dssp ECTTCTTEEEEE-------ETTSEEEEEETT
T ss_pred ECCCCCCEEEEE-------eCCCeEEEEECC
Confidence 999655555677 889999999974
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.83 E-value=6.5e-20 Score=112.83 Aligned_cols=99 Identities=16% Similarity=0.140 Sum_probs=83.0
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++.||+|++||+.+++.+..+..|...|.++.|+|++++|++++.|+.|++||+++++.... .... -..+++++
T Consensus 29 ~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~---~~~h-~~~v~~~~ 104 (304)
T 2ynn_A 29 LTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVD---FEAH-PDYIRSIA 104 (304)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEE---EECC-SSCEEEEE
T ss_pred EEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEE---EeCC-CCcEEEEE
Confidence 4678999999999999999999999999999999999999999999999999999998765541 1111 14567788
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|++..+ +++ +.|+.|++||++
T Consensus 105 ~~~~~~~l-~sg-------s~D~~v~lWd~~ 127 (304)
T 2ynn_A 105 VHPTKPYV-LSG-------SDDLTVKLWNWE 127 (304)
T ss_dssp ECSSSSEE-EEE-------ETTSCEEEEEGG
T ss_pred EcCCCCEE-EEE-------CCCCeEEEEECC
Confidence 99988876 455 789999999974
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.83 E-value=8.8e-20 Score=113.75 Aligned_cols=98 Identities=17% Similarity=0.134 Sum_probs=82.5
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
+++.|++|++||+.+++.+..+.+|.+.|.+++|+|+++++++++.|+.+++||++....... .... -.+++.++|
T Consensus 159 s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~---~~~h-~~~v~~v~~ 234 (340)
T 1got_B 159 TSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT---FTGH-ESDINAICF 234 (340)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEE---ECCC-SSCEEEEEE
T ss_pred EEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEE---EcCC-cCCEEEEEE
Confidence 567899999999999999999999999999999999999999999999999999988765541 1111 145678899
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|++..++ ++ +.|+.|++||++
T Consensus 235 ~p~~~~l~-s~-------s~d~~v~iwd~~ 256 (340)
T 1got_B 235 FPNGNAFA-TG-------SDDATCRLFDLR 256 (340)
T ss_dssp CTTSSEEE-EE-------ETTSCEEEEETT
T ss_pred cCCCCEEE-EE-------cCCCcEEEEECC
Confidence 99888764 55 789999999975
No 6
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.83 E-value=3.4e-20 Score=116.53 Aligned_cols=98 Identities=9% Similarity=0.075 Sum_probs=80.7
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCC-cEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNG-RYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
+++.|+.|++||+++++++..+.+|...|.+++|+|++ ++|++++.|++|++||+++++..... .+. .++++++
T Consensus 244 ~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~----~H~-~~V~~va 318 (357)
T 4g56_B 244 CGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL----SHR-DFVTGVA 318 (357)
T ss_dssp EEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC----CCS-SCEEEEE
T ss_pred EeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC----CCC-CCEEEEE
Confidence 56789999999999999999999999999999999986 68999999999999999987665421 111 4677889
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|.+..+++++ +.|+.|++||+.
T Consensus 319 fsP~d~~~l~s~-------s~Dg~v~iW~~~ 342 (357)
T 4g56_B 319 WSPLDHSKFTTV-------GWDHKVLHHHLP 342 (357)
T ss_dssp ECSSSTTEEEEE-------ETTSCEEEEECC
T ss_pred EeCCCCCEEEEE-------cCCCeEEEEECC
Confidence 998544445666 789999999974
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.83 E-value=5.6e-20 Score=114.09 Aligned_cols=99 Identities=17% Similarity=0.216 Sum_probs=82.4
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
|+++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||++....... .... -.++..++
T Consensus 180 asg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~---~~~h-~~~v~~~~ 255 (321)
T 3ow8_A 180 ASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT---LSGH-ASWVLNVA 255 (321)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEE---ECCC-SSCEEEEE
T ss_pred EEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEE---EcCC-CCceEEEE
Confidence 3567899999999999999999999999999999999999999999999999999987665431 1111 14567788
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|++..+ +++ +.|+.|++||++
T Consensus 256 ~sp~~~~l-~s~-------s~D~~v~iwd~~ 278 (321)
T 3ow8_A 256 FCPDDTHF-VSS-------SSDKSVKVWDVG 278 (321)
T ss_dssp ECTTSSEE-EEE-------ETTSCEEEEETT
T ss_pred ECCCCCEE-EEE-------eCCCcEEEEeCC
Confidence 99998876 455 789999999974
No 8
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.83 E-value=1.6e-20 Score=119.16 Aligned_cols=100 Identities=16% Similarity=0.175 Sum_probs=80.3
Q ss_pred CcccccCeeeecCCCCcee-----eeeeecccccEEEEEEcC--------CCcEEEEEeCCCeEEEEecCCCceeeeecc
Q psy8803 1 KKSWYEEYKRLDYHTPIVE-----TEVLTQHTHQVLHVSFSH--------NGRYFATCSKDGYILVWTSSYPSKVKYSHD 67 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~-----~~~~~~~~~~v~~i~~s~--------~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~ 67 (111)
|+++.|++|+|||...++. +..+.+|.+.|.+++|+| |+++|++++.|++++|||++.......
T Consensus 105 as~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~--- 181 (393)
T 4gq1_A 105 ACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILA--- 181 (393)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEE---
T ss_pred EEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeee---
Confidence 4678899999999987643 334678999999999998 789999999999999999987654431
Q ss_pred eeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 68 MKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 68 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
..... .++.+++|+|++..+++++ +.|++|++||++
T Consensus 182 ~~~~~-~~v~~v~~~p~~~~~l~~~-------~~d~~v~~wd~~ 217 (393)
T 4gq1_A 182 GYPLS-SPGISVQFRPSNPNQLIVG-------ERNGNIRIFDWT 217 (393)
T ss_dssp EEECS-SCEEEEEEETTEEEEEEEE-------ETTSEEEEEETT
T ss_pred ecCCC-CCcEEEEECCCCCceEEec-------CCCCEEEEEECC
Confidence 12222 4667899999988777888 899999999974
No 9
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.83 E-value=6.2e-20 Score=117.07 Aligned_cols=98 Identities=16% Similarity=0.279 Sum_probs=81.0
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
+++.|++|++||+.+++++..+.+|...|.++.|+|++++|++++.|+.|++||++....... .... -.++.+++|
T Consensus 313 sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~---~~~h-~~~v~~l~~ 388 (410)
T 1vyh_C 313 SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKT---LNAH-EHFVTSLDF 388 (410)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEE---EECC-SSCEEEEEE
T ss_pred EEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEE---EcCC-CCcEEEEEE
Confidence 567899999999999999999999999999999999999999999999999999987655431 1111 145678889
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|++..+ ++| +.|+.|+||++|
T Consensus 389 ~~~~~~l-~sg-------s~D~~i~vW~~r 410 (410)
T 1vyh_C 389 HKTAPYV-VTG-------SVDQTVKVWECR 410 (410)
T ss_dssp CSSSSCE-EEE-------ETTSEEEEEC--
T ss_pred cCCCCEE-EEE-------eCCCcEEEEeCC
Confidence 9988876 556 789999999986
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.83 E-value=3.2e-19 Score=110.43 Aligned_cols=103 Identities=17% Similarity=0.175 Sum_probs=79.9
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee---eecceeeeec----
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK---YSHDMKTFSW---- 73 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~---~~~~~~~~~~---- 73 (111)
++++.|++|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|+.+++||++...... |...+..+.+
T Consensus 81 ~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~ 160 (319)
T 3frx_A 81 LSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNE 160 (319)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC-
T ss_pred EEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCC
Confidence 367899999999999999999999999999999999999999999999999999987532111 2111111111
Q ss_pred ------------------------------------CceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 74 ------------------------------------KYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 74 ------------------------------------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.+++.++|+|++..++ ++ +.|+.|++||++
T Consensus 161 ~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~-s~-------~~dg~i~iwd~~ 226 (319)
T 3frx_A 161 KADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIA-SA-------GKDGEIMLWNLA 226 (319)
T ss_dssp -----CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEE-EE-------ETTCEEEEEETT
T ss_pred CCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEE-EE-------eCCCeEEEEECC
Confidence 2356788999887764 44 678999999874
No 11
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.82 E-value=1.7e-19 Score=111.91 Aligned_cols=99 Identities=17% Similarity=0.209 Sum_probs=82.5
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++.|++|++||+..++....+.+|...|.+++|+|++.+|++++.|+++++||+++..+... .... -.++..++
T Consensus 222 ~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~---~~~h-~~~v~~v~ 297 (321)
T 3ow8_A 222 VTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHT---FFDH-QDQVWGVK 297 (321)
T ss_dssp EEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE---ECCC-SSCEEEEE
T ss_pred EEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEE---EcCC-CCcEEEEE
Confidence 3678899999999999999999999999999999999999999999999999999998766542 1111 14566788
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|++..++ ++ +.|+.|++||..
T Consensus 298 ~s~~g~~l~-s~-------~~d~~i~vwd~p 320 (321)
T 3ow8_A 298 YNGNGSKIV-SV-------GDDQEIHIYDCP 320 (321)
T ss_dssp ECTTSSEEE-EE-------ETTCCEEEEECC
T ss_pred ECCCCCEEE-EE-------eCCCeEEEEeCC
Confidence 999888765 55 689999999963
No 12
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.82 E-value=3.1e-19 Score=110.51 Aligned_cols=102 Identities=14% Similarity=0.224 Sum_probs=80.8
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee---eecceeeeecC----
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK---YSHDMKTFSWK---- 74 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~---~~~~~~~~~~~---- 74 (111)
+++.|++|++||+.+.+....+.+|...|.+++|+|++++|++++.|+.|++||++..+... ....+..+.|+
T Consensus 171 s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~ 250 (319)
T 3frx_A 171 SAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRY 250 (319)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSS
T ss_pred EEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCC
Confidence 56789999999999999888999999999999999999999999999999999998754332 11222222221
Q ss_pred -------------------------------------ceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 75 -------------------------------------YTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 75 -------------------------------------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.+..++|+|++..++ +| +.|+.|++||+.
T Consensus 251 ~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~-sg-------~~Dg~i~vWd~~ 316 (319)
T 3frx_A 251 WLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLF-AG-------YTDNVIRVWQVM 316 (319)
T ss_dssp EEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEE-EE-------ETTSCEEEEEEE
T ss_pred EEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEE-Ee-------ecCceEEEEEEe
Confidence 234689999988874 45 789999999973
No 13
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.82 E-value=9.1e-20 Score=116.29 Aligned_cols=99 Identities=20% Similarity=0.231 Sum_probs=82.9
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++.|++|++||+.+++....+.+|.+.|.+++|+|++++|++++.|++|++||+........ ..... .++.+++
T Consensus 124 ~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~---~~~h~-~~V~~v~ 199 (410)
T 1vyh_C 124 VSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT---MHGHD-HNVSSVS 199 (410)
T ss_dssp EEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEEC---CCCCS-SCEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEE---EcCCC-CCEEEEE
Confidence 4678899999999999999999999999999999999999999999999999999987665541 11111 4567788
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|++..+ +++ +.|+.|++||++
T Consensus 200 ~~p~~~~l-~s~-------s~D~~i~~wd~~ 222 (410)
T 1vyh_C 200 IMPNGDHI-VSA-------SRDKTIKMWEVQ 222 (410)
T ss_dssp ECSSSSEE-EEE-------ETTSEEEEEETT
T ss_pred EeCCCCEE-EEE-------eCCCeEEEEECC
Confidence 99988876 455 789999999974
No 14
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.82 E-value=5.4e-19 Score=110.24 Aligned_cols=58 Identities=19% Similarity=0.194 Sum_probs=54.4
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
++++.|++|++||+.+++.+..+.+|...|.+++|+|+++.|++++.|+.|++||+..
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG 149 (343)
T ss_dssp EEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS
T ss_pred EEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC
Confidence 3678899999999999999999999999999999999999999999999999999864
No 15
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.81 E-value=4.9e-19 Score=110.44 Aligned_cols=99 Identities=14% Similarity=0.142 Sum_probs=79.8
Q ss_pred CcccccCeeeecCCCC-------ceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeec
Q psy8803 1 KKSWYEEYKRLDYHTP-------IVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSW 73 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~-------~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~ 73 (111)
++++.|++|++||+.. +.+...+.+|...|.+++|+|++.++++++.|+++++||++++..... .... -
T Consensus 43 ~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~---~~~h-~ 118 (343)
T 2xzm_R 43 ISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKR---FVGH-Q 118 (343)
T ss_dssp EEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEE---EECC-C
T ss_pred EEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEE---EcCC-C
Confidence 4678899999999874 345677889999999999999999999999999999999998765541 1111 1
Q ss_pred CceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 74 KYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 74 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.++.+++|+|++..+++ + +.|+.|++||++
T Consensus 119 ~~v~~v~~sp~~~~l~s-~-------~~d~~i~~wd~~ 148 (343)
T 2xzm_R 119 SEVYSVAFSPDNRQILS-A-------GAEREIKLWNIL 148 (343)
T ss_dssp SCEEEEEECSSTTEEEE-E-------ETTSCEEEEESS
T ss_pred CcEEEEEECCCCCEEEE-E-------cCCCEEEEEecc
Confidence 45677889999888754 4 679999999973
No 16
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.81 E-value=6.3e-19 Score=110.63 Aligned_cols=98 Identities=16% Similarity=0.185 Sum_probs=78.7
Q ss_pred ccccCeeeecCCCCce---------------e-eeeeecccccEEEEEEcCCCcEEEEEeCCCe-EEEEecCCCceeeee
Q psy8803 3 SWYEEYKRLDYHTPIV---------------E-TEVLTQHTHQVLHVSFSHNGRYFATCSKDGY-ILVWTSSYPSKVKYS 65 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~---------------~-~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~-i~iw~~~~~~~~~~~ 65 (111)
+..||.|++||+.++. + +..+.+|.+.|.+++|+|++++|++++.|++ +++||++++.....
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~- 233 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVRE- 233 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEE-
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE-
Confidence 6789999999998765 2 6778899999999999999999999999998 99999998776542
Q ss_pred ccee-eeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 66 HDMK-TFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 66 ~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.. ...-.++++++|+|++..++ ++ +.|+.|++||++
T Consensus 234 --~~~g~h~~~v~~~~~s~~~~~l~-s~-------s~d~~v~iw~~~ 270 (355)
T 3vu4_A 234 --FRRGLDRADVVDMKWSTDGSKLA-VV-------SDKWTLHVFEIF 270 (355)
T ss_dssp --EECTTCCSCEEEEEECTTSCEEE-EE-------ETTCEEEEEESS
T ss_pred --EEcCCCCCcEEEEEECCCCCEEE-EE-------ECCCEEEEEEcc
Confidence 22 10125677899999988765 44 689999999974
No 17
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.81 E-value=7.4e-19 Score=109.59 Aligned_cols=101 Identities=18% Similarity=0.115 Sum_probs=81.9
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++.|++|++||+++++.+..+.+|...|.+++|+|+++.|++++.|+.+++||++........... . ....+..++
T Consensus 200 ~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~-~-~~~~v~~~~ 277 (340)
T 1got_B 200 VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD-N-IICGITSVS 277 (340)
T ss_dssp EEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT-T-CCSCEEEEE
T ss_pred EEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccC-C-cccceEEEE
Confidence 35678999999999999999999999999999999999999999999999999999886554311100 0 013467889
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|++..++ +| +.|+.|++||++
T Consensus 278 ~s~~g~~l~-~g-------~~d~~i~vwd~~ 300 (340)
T 1got_B 278 FSKSGRLLL-AG-------YDDFNCNVWDAL 300 (340)
T ss_dssp ECTTSSEEE-EE-------ETTSEEEEEETT
T ss_pred ECCCCCEEE-EE-------CCCCeEEEEEcc
Confidence 999988765 45 689999999964
No 18
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.81 E-value=9.1e-19 Score=109.85 Aligned_cols=99 Identities=16% Similarity=0.144 Sum_probs=81.7
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcC--CCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceee
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSH--NGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQY 78 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~--~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (111)
++++.|++|++||+.+++.+..+.+|...|.++.|+| +++.|++++.|+.+++||+++...... ... .-.++++
T Consensus 170 ~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~---~~~-h~~~v~~ 245 (354)
T 2pbi_B 170 LTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQA---FET-HESDVNS 245 (354)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEE---ECC-CSSCEEE
T ss_pred EEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEE---ecC-CCCCeEE
Confidence 3578899999999999999999999999999999988 478999999999999999998765541 111 1245678
Q ss_pred EEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 79 SQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
++|+|++..+ +++ +.|+.|++||++
T Consensus 246 v~~~p~~~~l-~s~-------s~D~~v~lwd~~ 270 (354)
T 2pbi_B 246 VRYYPSGDAF-ASG-------SDDATCRLYDLR 270 (354)
T ss_dssp EEECTTSSEE-EEE-------ETTSCEEEEETT
T ss_pred EEEeCCCCEE-EEE-------eCCCeEEEEECC
Confidence 8899988776 455 789999999975
No 19
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.80 E-value=7.9e-19 Score=116.71 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=83.2
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeec--ceee-eecCcee
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSH--DMKT-FSWKYTQ 77 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~--~~~~-~~~~~~~ 77 (111)
++++.|++|++||..+++.+..+.+|...|.+++|+|++++|++++.|++|++||+..+....... .... ..-.++.
T Consensus 164 ~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~ 243 (611)
T 1nr0_A 164 ISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF 243 (611)
T ss_dssp EEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEE
T ss_pred EEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEE
Confidence 367889999999999999999999999999999999999999999999999999998766543210 0000 1124677
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.++|+|++..+ +++ +.|++|++||++
T Consensus 244 ~v~~spdg~~l-~s~-------s~D~~v~lWd~~ 269 (611)
T 1nr0_A 244 GLTWSPDGTKI-ASA-------SADKTIKIWNVA 269 (611)
T ss_dssp EEEECTTSSEE-EEE-------ETTSEEEEEETT
T ss_pred EEEECCCCCEE-EEE-------eCCCeEEEEeCC
Confidence 89999998876 455 789999999974
No 20
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.80 E-value=8.5e-19 Score=108.99 Aligned_cols=101 Identities=17% Similarity=0.312 Sum_probs=71.3
Q ss_pred CcccccCeeeecCCCC-------ceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCC-ceeeeecceeeee
Q psy8803 1 KKSWYEEYKRLDYHTP-------IVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYP-SKVKYSHDMKTFS 72 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~-------~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~-~~~~~~~~~~~~~ 72 (111)
|+++.|++|++||... .+.+..+.+|...|.+++|+|++++|++++.|+++++||++.. ............
T Consensus 74 as~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h- 152 (330)
T 2hes_X 74 AAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEH- 152 (330)
T ss_dssp EEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCC-
T ss_pred EEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccC-
Confidence 4678899999999852 3566778899999999999999999999999999999999532 111100011111
Q ss_pred cCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 73 WKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 73 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
-.+++.++|+|++..+ +++ +.|+.|++||+
T Consensus 153 ~~~v~~v~~~p~~~~l-~s~-------s~D~~i~iW~~ 182 (330)
T 2hes_X 153 SQDVKHVIWHPSEALL-ASS-------SYDDTVRIWKD 182 (330)
T ss_dssp SSCEEEEEECSSSSEE-EEE-------ETTSCEEEEEE
T ss_pred CCceEEEEECCCCCEE-EEE-------cCCCeEEEEEC
Confidence 1456788899988776 555 78999999986
No 21
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.80 E-value=5.4e-19 Score=111.68 Aligned_cols=102 Identities=18% Similarity=0.183 Sum_probs=80.4
Q ss_pred CcccccCeeeecCCC-CceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecc---eeeeecCce
Q psy8803 1 KKSWYEEYKRLDYHT-PIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHD---MKTFSWKYT 76 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~-~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~---~~~~~~~~~ 76 (111)
++++.|++|++||++ .++.+..+.+|.+.|.+++|+|+++.|++++.|++|++||++.+........ ........+
T Consensus 222 ~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v 301 (380)
T 3iz6_a 222 ISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIV 301 (380)
T ss_dssp EEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSC
T ss_pred EEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCce
Confidence 357789999999998 4577888899999999999999999999999999999999998765541110 001111236
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
..++|+|++..+++ | +.++.|++||+
T Consensus 302 ~~~~~s~~g~~l~~-g-------~~dg~i~vwd~ 327 (380)
T 3iz6_a 302 TSVAFSISGRLLFA-G-------YSNGDCYVWDT 327 (380)
T ss_dssp SEEEECSSSSEEEE-E-------CTTSCEEEEET
T ss_pred EEEEECCCCCEEEE-E-------ECCCCEEEEEC
Confidence 78999999988754 5 67999999996
No 22
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.80 E-value=9.2e-19 Score=109.54 Aligned_cols=99 Identities=14% Similarity=0.100 Sum_probs=62.7
Q ss_pred cccccCeeeecCCCCceeeeeeeccc---ccEEEEEEcCCCcEE------------EEEeCCCeEEEEe-----------
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHT---HQVLHVSFSHNGRYF------------ATCSKDGYILVWT----------- 55 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~---~~v~~i~~s~~~~~l------------~s~~~d~~i~iw~----------- 55 (111)
+++.|++|+|||+.+++++.++.+|. ..+.+++|+|++.++ ++|+.|+++++||
T Consensus 198 SgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~ 277 (356)
T 2w18_A 198 GTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVML 277 (356)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEE
T ss_pred EecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEE
Confidence 57899999999999999999998653 356566777766654 2344444455554
Q ss_pred ----------------------------------cCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCcccc
Q psy8803 56 ----------------------------------SSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQST 101 (111)
Q Consensus 56 ----------------------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 101 (111)
+.+++.... .....-.....++|+|++.++ ++| +.
T Consensus 278 ~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~t---L~gH~~~vvs~vafSPDG~~L-aSG-------S~ 346 (356)
T 2w18_A 278 YCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTAL---LPPVSDQHWSFVKWSGTDSHL-LAG-------QK 346 (356)
T ss_dssp ECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEE---ECCC--CCCCEEEECSSSSEE-EEE-------CT
T ss_pred eeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEE---ecCCCCCeEEEEEECCCCCEE-EEE-------EC
Confidence 444433321 000110112357999999886 566 88
Q ss_pred CceEEEeecC
Q psy8803 102 SGEIAVFSLQ 111 (111)
Q Consensus 102 ~~~i~iw~~~ 111 (111)
|++|+|||+.
T Consensus 347 D~TIklWd~~ 356 (356)
T 2w18_A 347 DGNIFVYHYS 356 (356)
T ss_dssp TSCEEEEEEC
T ss_pred CCcEEEecCC
Confidence 9999999974
No 23
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.79 E-value=1e-18 Score=110.16 Aligned_cols=93 Identities=14% Similarity=0.026 Sum_probs=74.1
Q ss_pred eeeecCCCCce----eeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEcc
Q psy8803 8 YKRLDYHTPIV----ETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 8 ~i~iw~~~~~~----~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
.+++|++.... ....+.+|...|.+++|+||+++|++|+.|++|+|||+++.++... +....-.++++++|+|
T Consensus 246 ~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~---~~~gH~~~V~~v~fSp 322 (365)
T 4h5i_A 246 VLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKI---FKQAHSFAITEVTISP 322 (365)
T ss_dssp EEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEE---ETTSSSSCEEEEEECT
T ss_pred EEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEE---ecCcccCCEEEEEECC
Confidence 67888886553 2446678999999999999999999999999999999998776652 2111125678899999
Q ss_pred CCCEEEEeccccCCccccCceEEEeecC
Q psy8803 84 SDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
++.+| +++ +.|++|+|||+.
T Consensus 323 dg~~l-aS~-------S~D~tvrvw~ip 342 (365)
T 4h5i_A 323 DSTYV-ASV-------SAANTIHIIKLP 342 (365)
T ss_dssp TSCEE-EEE-------ETTSEEEEEECC
T ss_pred CCCEE-EEE-------eCCCeEEEEEcC
Confidence 98876 566 899999999973
No 24
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.79 E-value=1.8e-18 Score=108.50 Aligned_cols=101 Identities=16% Similarity=0.102 Sum_probs=81.5
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++.|++|++||+++++++..+.+|...|.+++|+|+++.|++++.|+++++||++..........- . ....+..++
T Consensus 214 ~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~-~-~~~~~~~~~ 291 (354)
T 2pbi_B 214 VSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKE-S-IIFGASSVD 291 (354)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT-T-CCSCEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCC-C-cccceeEEE
Confidence 35778999999999999999999999999999999999999999999999999999876544311100 0 012456789
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|++..+++ + +.|+.|++||++
T Consensus 292 ~s~~g~~l~~-g-------~~d~~i~vwd~~ 314 (354)
T 2pbi_B 292 FSLSGRLLFA-G-------YNDYTINVWDVL 314 (354)
T ss_dssp ECTTSSEEEE-E-------ETTSCEEEEETT
T ss_pred EeCCCCEEEE-E-------ECCCcEEEEECC
Confidence 9999887654 4 679999999973
No 25
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.79 E-value=4.7e-19 Score=111.31 Aligned_cols=99 Identities=14% Similarity=0.052 Sum_probs=72.8
Q ss_pred cccccCeeeecCCCCceeee----eeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCcee
Q psy8803 2 KSWYEEYKRLDYHTPIVETE----VLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQ 77 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~----~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 77 (111)
+++.||+|+|||+.+++... ...+|...|.+++|+|++++|++++.|+.|++||++++..... .... -..++
T Consensus 110 ~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~---~~~h-~~~v~ 185 (357)
T 4g56_B 110 VASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKS---YNAH-SSEVN 185 (357)
T ss_dssp EEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEE---ECCC-SSCEE
T ss_pred EEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE---EcCC-CCCEE
Confidence 46789999999998775432 3347999999999999999999999999999999998766542 1111 14567
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+++|+|++..+++++ +.|+.|++||++
T Consensus 186 ~v~~s~~~~~~~~s~-------~~dg~v~~wd~~ 212 (357)
T 4g56_B 186 CVAACPGKDTIFLSC-------GEDGRILLWDTR 212 (357)
T ss_dssp EEEECTTCSSCEEEE-------ETTSCEEECCTT
T ss_pred EEEEccCCCceeeee-------ccCCceEEEECC
Confidence 888999887666776 789999999974
No 26
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.79 E-value=2.5e-18 Score=109.07 Aligned_cols=99 Identities=11% Similarity=0.102 Sum_probs=81.3
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
|+++.|++|++||+.+++.+..+.+|...|.+++|+|+++.|++++.|+.+++||++++...... .. -..+..++
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~----~~-~~~v~~~~ 213 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL----SI-EDGVTTVA 213 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE----EC-SSCEEEEE
T ss_pred EEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE----Ec-CCCcEEEE
Confidence 35788999999999999999999999999999999999999999999999999999987654311 11 13466788
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|.+..+++++ +.|+.|++||++
T Consensus 214 ~~~~~~~~l~~~-------s~d~~v~iwd~~ 237 (393)
T 1erj_A 214 VSPGDGKYIAAG-------SLDRAVRVWDSE 237 (393)
T ss_dssp ECSTTCCEEEEE-------ETTSCEEEEETT
T ss_pred EECCCCCEEEEE-------cCCCcEEEEECC
Confidence 998444555666 789999999964
No 27
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.79 E-value=3.4e-18 Score=105.07 Aligned_cols=99 Identities=17% Similarity=0.262 Sum_probs=82.1
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++.|+.+++|+..+++....+.+|...|.+++|+|++++|++++.|+.+++||++....... .... -..+.+++
T Consensus 39 ~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~---~~~~-~~~v~~~~ 114 (312)
T 4ery_A 39 ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKT---LKGH-SNYVFCCN 114 (312)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE---EECC-SSCEEEEE
T ss_pred EEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEE---EcCC-CCCEEEEE
Confidence 3678899999999999998889999999999999999999999999999999999998765542 1111 14566788
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|++..++ ++ +.|+.|++||++
T Consensus 115 ~~~~~~~l~-s~-------~~d~~i~iwd~~ 137 (312)
T 4ery_A 115 FNPQSNLIV-SG-------SFDESVRIWDVK 137 (312)
T ss_dssp ECSSSSEEE-EE-------ETTSCEEEEETT
T ss_pred EcCCCCEEE-EE-------eCCCcEEEEECC
Confidence 899887764 45 689999999974
No 28
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.78 E-value=4e-18 Score=104.78 Aligned_cols=99 Identities=14% Similarity=0.165 Sum_probs=82.3
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++.|+.|++||+.+++.+..+.+|...|.++.|+|++++|++++.|+.|++||++....... .... -.++..++
T Consensus 81 ~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~---~~~~-~~~v~~~~ 156 (312)
T 4ery_A 81 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT---LPAH-SDPVSAVH 156 (312)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEE---ECCC-SSCEEEEE
T ss_pred EEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEE---ecCC-CCcEEEEE
Confidence 3567899999999999999999999999999999999999999999999999999998765542 1111 14567788
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|++..++ ++ +.|+.|++||++
T Consensus 157 ~~~~~~~l~-~~-------~~d~~i~~wd~~ 179 (312)
T 4ery_A 157 FNRDGSLIV-SS-------SYDGLCRIWDTA 179 (312)
T ss_dssp ECTTSSEEE-EE-------ETTSCEEEEETT
T ss_pred EcCCCCEEE-EE-------eCCCcEEEEECC
Confidence 999888764 45 679999999974
No 29
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.78 E-value=2e-18 Score=109.03 Aligned_cols=103 Identities=16% Similarity=0.153 Sum_probs=80.2
Q ss_pred CcccccCeeeecCCCCceeeeeeeccc-------ccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeec
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHT-------HQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSW 73 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~-------~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~ 73 (111)
++++.|++|++||+++++.+..+..+. ..|.+++|+|++++|++++.|+.|++||.................-
T Consensus 265 ~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~ 344 (380)
T 3iz6_a 265 GTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHE 344 (380)
T ss_dssp EEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCC
T ss_pred EEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCC
Confidence 467899999999999998877775443 2488999999999999999999999999987665542222211122
Q ss_pred CceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 74 KYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 74 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.++.+++|+|++..+ ++| +.|+.|+||++.
T Consensus 345 ~~v~~l~~s~dg~~l-~sg-------s~D~~i~iW~~~ 374 (380)
T 3iz6_a 345 GRISCLGLSSDGSAL-CTG-------SWDKNLKIWAFS 374 (380)
T ss_dssp CCCCEEEECSSSSEE-EEE-------CTTSCEEEEECC
T ss_pred CceEEEEECCCCCEE-EEe-------eCCCCEEEEecC
Confidence 467788999998876 556 789999999974
No 30
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.78 E-value=2e-18 Score=107.84 Aligned_cols=101 Identities=17% Similarity=0.261 Sum_probs=78.4
Q ss_pred CcccccCeeeecCCCCc--eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceee
Q psy8803 1 KKSWYEEYKRLDYHTPI--VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQY 78 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~--~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (111)
|+++.|+++++|++..+ +.+..+.+|...|.+++|+|++++|++++.|+.+++||++.............. -..+..
T Consensus 77 ~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h-~~~v~~ 155 (345)
T 3fm0_A 77 ASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSH-TQDVKH 155 (345)
T ss_dssp EEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCC-CSCEEE
T ss_pred EEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCc-CCCeEE
Confidence 46788999999998865 467788999999999999999999999999999999999865332211011111 145677
Q ss_pred EEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 79 SQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
++|+|++..+ +++ +.|+.|++||+
T Consensus 156 ~~~~p~~~~l-~s~-------s~d~~i~~w~~ 179 (345)
T 3fm0_A 156 VVWHPSQELL-ASA-------SYDDTVKLYRE 179 (345)
T ss_dssp EEECSSSSCE-EEE-------ETTSCEEEEEE
T ss_pred EEECCCCCEE-EEE-------eCCCcEEEEEe
Confidence 8899988776 455 78999999986
No 31
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.78 E-value=7.2e-18 Score=104.76 Aligned_cols=102 Identities=8% Similarity=0.100 Sum_probs=83.3
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcC-CCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSH-NGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
++++.||.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.|+.|++||++.............. -.++..+
T Consensus 89 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~v~~~ 167 (366)
T 3k26_A 89 AVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGH-RDEVLSA 167 (366)
T ss_dssp EEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSC-SSCEEEE
T ss_pred EEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccc-cCceeEE
Confidence 3577899999999999999999999999999999999 8999999999999999999987655422111111 2567788
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|+|++..+++ + +.|+.|++||++
T Consensus 168 ~~~~~~~~l~~-~-------~~dg~i~i~d~~ 191 (366)
T 3k26_A 168 DYDLLGEKIMS-C-------GMDHSLKLWRIN 191 (366)
T ss_dssp EECTTSSEEEE-E-------ETTSCEEEEESC
T ss_pred EECCCCCEEEE-e-------cCCCCEEEEECC
Confidence 99998887654 4 678999999975
No 32
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.78 E-value=4.4e-18 Score=107.90 Aligned_cols=99 Identities=14% Similarity=0.137 Sum_probs=81.7
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++.|+.|++||+..++....+.+|.+.|.+++|+|++++|++++.|+.|++||++....... .... -.++.+++
T Consensus 113 ~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~---~~~h-~~~v~~~~ 188 (420)
T 3vl1_A 113 ILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRT---LIGH-RATVTDIA 188 (420)
T ss_dssp EEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEE---EECC-SSCEEEEE
T ss_pred EEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceE---EcCC-CCcEEEEE
Confidence 3567899999999999988888889999999999999999999999999999999987654431 1111 24567888
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|++..++ ++ +.|+.|++||++
T Consensus 189 ~~~~~~~l~-s~-------~~d~~v~iwd~~ 211 (420)
T 3vl1_A 189 IIDRGRNVL-SA-------SLDGTIRLWECG 211 (420)
T ss_dssp EETTTTEEE-EE-------ETTSCEEEEETT
T ss_pred EcCCCCEEE-EE-------cCCCcEEEeECC
Confidence 999888775 55 689999999974
No 33
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.77 E-value=4.3e-18 Score=105.25 Aligned_cols=101 Identities=16% Similarity=0.239 Sum_probs=75.8
Q ss_pred CcccccCeeeecCCCCc---eeeeeeecccccEEEEEEcCCC----cEEEEEeCCCeEEEEecCCCceee-eecceeeee
Q psy8803 1 KKSWYEEYKRLDYHTPI---VETEVLTQHTHQVLHVSFSHNG----RYFATCSKDGYILVWTSSYPSKVK-YSHDMKTFS 72 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~---~~~~~~~~~~~~v~~i~~s~~~----~~l~s~~~d~~i~iw~~~~~~~~~-~~~~~~~~~ 72 (111)
++++.|++|++||+... +++..+.+|...|.+++|+|++ ++|++++.|++|++|+++...... ........
T Consensus 183 ~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~- 261 (316)
T 3bg1_A 183 ASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKF- 261 (316)
T ss_dssp ECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEEC-
T ss_pred EEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcC-
Confidence 36788999999999754 4677888999999999999986 889999999999999987521100 00001111
Q ss_pred cCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 73 WKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 73 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
-.++..++|+|++..++ ++ +.|+.|++|++
T Consensus 262 ~~~v~~v~~sp~g~~la-s~-------~~D~~v~lw~~ 291 (316)
T 3bg1_A 262 NDVVWHVSWSITANILA-VS-------GGDNKVTLWKE 291 (316)
T ss_dssp SSCEEEEEECTTTCCEE-EE-------ESSSCEEEEEE
T ss_pred CCcEEEEEEcCCCCEEE-EE-------cCCCeEEEEEE
Confidence 14567889999987764 44 67999999985
No 34
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.77 E-value=2.9e-18 Score=105.16 Aligned_cols=101 Identities=18% Similarity=0.305 Sum_probs=76.3
Q ss_pred CcccccCeeeecCCCC--ceeeeeeecccccEEEEEEcCC--CcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCce
Q psy8803 1 KKSWYEEYKRLDYHTP--IVETEVLTQHTHQVLHVSFSHN--GRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYT 76 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~--~~~~~~~~~~~~~v~~i~~s~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 76 (111)
|+++.|++|+|||+.. .+.+..+.+|.+.|.+++|+++ +++|++++.|+++++||++.+..... ......-.++
T Consensus 25 as~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~--~~~~~h~~~v 102 (297)
T 2pm7_B 25 ATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQI--AVHAVHSASV 102 (297)
T ss_dssp EEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCC--EEECCCSSCE
T ss_pred EEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEE--EEeecCCCce
Confidence 4678999999999974 3677889999999999999864 89999999999999999986531110 0001111456
Q ss_pred eeEEEccC--CCEEEEeccccCCccccCceEEEeecC
Q psy8803 77 QYSQFNES--DTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 77 ~~v~~~~~--~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
++++|+|+ +.. ++++ +.|+.|++||++
T Consensus 103 ~~v~~~p~~~g~~-l~s~-------s~d~~v~~wd~~ 131 (297)
T 2pm7_B 103 NSVQWAPHEYGPM-LLVA-------SSDGKVSVVEFK 131 (297)
T ss_dssp EEEEECCGGGCSE-EEEE-------ETTSEEEEEEBC
T ss_pred eEEEeCcCCCCcE-EEEE-------ECCCcEEEEEec
Confidence 67888886 445 4566 789999999974
No 35
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.77 E-value=6.8e-18 Score=113.42 Aligned_cols=60 Identities=23% Similarity=0.299 Sum_probs=55.6
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCce
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSK 61 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~ 61 (111)
+++.|++|++||+..++....+.+|.+.|.+++|+|++++|++++.|+.|++||++....
T Consensus 536 s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~ 595 (694)
T 3dm0_A 536 SASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKK 595 (694)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEE
T ss_pred EEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCce
Confidence 567899999999999999999999999999999999999999999999999999987543
No 36
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.77 E-value=2.7e-18 Score=106.18 Aligned_cols=100 Identities=19% Similarity=0.261 Sum_probs=76.9
Q ss_pred CcccccCeeeecCCCCce--eeeeeecccccEEEEEEcC--CCcEEEEEeCCCeEEEEecCCCc--eeeeecceeeeecC
Q psy8803 1 KKSWYEEYKRLDYHTPIV--ETEVLTQHTHQVLHVSFSH--NGRYFATCSKDGYILVWTSSYPS--KVKYSHDMKTFSWK 74 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~i~~s~--~~~~l~s~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~~ 74 (111)
|+++.|++|++||+..+. .+..+.+|.+.|.+++|+| ++++|++++.|+++++||++.+. .... .... -.
T Consensus 29 asgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~---~~~h-~~ 104 (316)
T 3bg1_A 29 ATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHE---HAGH-DS 104 (316)
T ss_dssp EEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEE---ECCC-SS
T ss_pred EEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEE---ccCC-CC
Confidence 467899999999998764 5678899999999999986 48999999999999999998753 2210 1111 14
Q ss_pred ceeeEEEccCC-CEEEEeccccCCccccCceEEEeecC
Q psy8803 75 YTQYSQFNESD-TLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 75 ~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
++++++|+|+. ..+++++ +.|+.|++||++
T Consensus 105 ~V~~v~~~p~~~g~~lasg-------s~D~~i~lwd~~ 135 (316)
T 3bg1_A 105 SVNSVCWAPHDYGLILACG-------SSDGAISLLTYT 135 (316)
T ss_dssp CCCEEEECCTTTCSCEEEE-------CSSSCEEEEEEC
T ss_pred ceEEEEECCCCCCcEEEEE-------cCCCCEEEEecC
Confidence 56778889873 3445666 889999999974
No 37
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.76 E-value=8.2e-18 Score=105.10 Aligned_cols=101 Identities=16% Similarity=0.133 Sum_probs=76.0
Q ss_pred CcccccCeeeecCCCCceee--e-eeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCcee
Q psy8803 1 KKSWYEEYKRLDYHTPIVET--E-VLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQ 77 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~--~-~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 77 (111)
|+++.|++|+|||...+... . ...+|...|.+++|+|++++|++++.|+.+++|+......... ...... -.++.
T Consensus 32 as~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~-~~~~~h-~~~v~ 109 (345)
T 3fm0_A 32 ASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECV-TTLEGH-ENEVK 109 (345)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEE-EEECCC-SSCEE
T ss_pred EEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEE-EEccCC-CCCce
Confidence 46789999999999876532 2 2368999999999999999999999999999999876532110 011111 14567
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+++|+|++..+ +++ +.|+.|++||++
T Consensus 110 ~v~~sp~~~~l-~s~-------s~D~~v~iwd~~ 135 (345)
T 3fm0_A 110 SVAWAPSGNLL-ATC-------SRDKSVWVWEVD 135 (345)
T ss_dssp EEEECTTSSEE-EEE-------ETTSCEEEEEEC
T ss_pred EEEEeCCCCEE-EEE-------ECCCeEEEEECC
Confidence 88899988776 455 789999999974
No 38
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.76 E-value=7.2e-18 Score=113.31 Aligned_cols=103 Identities=23% Similarity=0.273 Sum_probs=80.9
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++.|++|++||+.+++.+..+.+|...|.+++|+|+++.|++++.|++|++||............... .-..+.+++
T Consensus 446 ~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~-h~~~v~~~~ 524 (694)
T 3dm0_A 446 LSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEG-HRDWVSCVR 524 (694)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTS-CSSCEEEEE
T ss_pred EEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCC-CCCcEEEEE
Confidence 3678899999999999999999999999999999999999999999999999999875433221111111 113466788
Q ss_pred EccCCC-EEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDT-LLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~-~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|++. .+++++ +.|+.|++||++
T Consensus 525 ~~~~~~~~~l~s~-------s~d~~v~vwd~~ 549 (694)
T 3dm0_A 525 FSPNTLQPTIVSA-------SWDKTVKVWNLS 549 (694)
T ss_dssp ECSCSSSCEEEEE-------ETTSCEEEEETT
T ss_pred EeCCCCcceEEEE-------eCCCeEEEEECC
Confidence 898763 455666 889999999974
No 39
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.76 E-value=2.2e-17 Score=101.94 Aligned_cols=96 Identities=16% Similarity=0.156 Sum_probs=79.5
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
+++.|++|++||+.+++.+..+.+|.+.|.+++|+|++++|++++.|+.|++||++........ .. -..+..++|
T Consensus 190 s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~---~~--~~~v~~~~~ 264 (340)
T 4aow_A 190 SCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL---DG--GDIINALCF 264 (340)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE---EC--SSCEEEEEE
T ss_pred EEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeee---cC--CceEEeeec
Confidence 4678999999999999999999999999999999999999999999999999999987655421 11 135667888
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|++..+.+ +.|+.|++||++
T Consensus 265 ~~~~~~~~~---------~~d~~i~iwd~~ 285 (340)
T 4aow_A 265 SPNRYWLCA---------ATGPSIKIWDLE 285 (340)
T ss_dssp CSSSSEEEE---------EETTEEEEEETT
T ss_pred CCCCceeec---------cCCCEEEEEECC
Confidence 988765544 568999999974
No 40
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.76 E-value=4.2e-18 Score=107.96 Aligned_cols=103 Identities=17% Similarity=0.234 Sum_probs=82.1
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeee-------ecceeeeec
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKY-------SHDMKTFSW 73 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~-------~~~~~~~~~ 73 (111)
++++.|++|++||+.+++.+..+.+|...|.+++|+|+++.|++++.|+.+++||++....... ...+..+.+
T Consensus 155 ~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 234 (420)
T 3vl1_A 155 ISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIAL 234 (420)
T ss_dssp EEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEE
T ss_pred EEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEE
Confidence 3578899999999999999999999999999999999999999999999999999998655431 122333322
Q ss_pred -------------CceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 74 -------------KYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 74 -------------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.++..++|+|++..+ +++ +.++.|++||++
T Consensus 235 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~-------~~dg~i~i~d~~ 277 (420)
T 3vl1_A 235 FVGTDRQLHEISTSKKNNLEFGTYGKYV-IAG-------HVSGVITVHNVF 277 (420)
T ss_dssp EECCCSSCGGGCCCCCCTTCSSCTTEEE-EEE-------ETTSCEEEEETT
T ss_pred ecCCcceeeecccCcccceEEcCCCCEE-EEE-------cCCCeEEEEECC
Confidence 345567788887666 555 679999999974
No 41
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.75 E-value=1.8e-17 Score=110.19 Aligned_cols=103 Identities=17% Similarity=0.162 Sum_probs=80.8
Q ss_pred CcccccCeeeecCCCCceeeeeee-------cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeec-------
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLT-------QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSH------- 66 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~-------~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~------- 66 (111)
|+++.|++|++||..+++.+..+. +|.+.|.+++|+|++++|++++.|+++++||+++........
T Consensus 206 as~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~ 285 (611)
T 1nr0_A 206 ASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIED 285 (611)
T ss_dssp EEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGG
T ss_pred EEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccc
Confidence 467899999999999888887774 799999999999999999999999999999998765432100
Q ss_pred c--------------------------------eeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 67 D--------------------------------MKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 67 ~--------------------------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
. .....-.+++.++|+|++..++ ++ +.|+.|++||++
T Consensus 286 ~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~-s~-------s~D~~v~~Wd~~ 354 (611)
T 1nr0_A 286 QQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLF-SA-------DAEGHINSWDIS 354 (611)
T ss_dssp CEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE-EE-------ETTSCEEEEETT
T ss_pred eeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEE-EE-------eCCCcEEEEECC
Confidence 0 0001113577899999988875 45 689999999974
No 42
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.75 E-value=7.9e-18 Score=104.91 Aligned_cols=99 Identities=12% Similarity=0.079 Sum_probs=77.1
Q ss_pred cccccCeeeecCCCCceeeeeee-cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLT-QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
+++.|++|++||+.+++.+..+. .|...+.+++|+|++.+|++|+.|+.|++||+++....... .....-.+++.++
T Consensus 144 s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~--~~~~h~~~v~~l~ 221 (343)
T 3lrv_A 144 WADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSR--FPVDEEAKIKEVK 221 (343)
T ss_dssp EEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEE--CCCCTTSCEEEEE
T ss_pred EEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccE--EeccCCCCEEEEE
Confidence 57889999999999888766553 45568999999999999999999999999999987654111 1110125778899
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|++..++++ + ++.|++||++
T Consensus 222 fs~~g~~l~s~--------~-~~~v~iwd~~ 243 (343)
T 3lrv_A 222 FADNGYWMVVE--------C-DQTVVCFDLR 243 (343)
T ss_dssp ECTTSSEEEEE--------E-SSBEEEEETT
T ss_pred EeCCCCEEEEE--------e-CCeEEEEEcC
Confidence 99999887653 3 4589999985
No 43
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.75 E-value=9.5e-18 Score=110.03 Aligned_cols=95 Identities=18% Similarity=0.222 Sum_probs=76.7
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
|+++.|++|++||. +++.+..+.+|...|.+++|+|++++|++++.|+.|++||... +... ....+. .++..++
T Consensus 483 as~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~-~~~~---~~~~h~-~~v~~~~ 556 (577)
T 2ymu_A 483 ASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG-QLLQ---TLTGHS-SSVWGVA 556 (577)
T ss_dssp EEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS-CEEE---EEECCS-SCEEEEE
T ss_pred EEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC-CEEE---EEcCCC-CCEEEEE
Confidence 35678999999996 5788889999999999999999999999999999999999643 3332 112221 4667889
Q ss_pred EccCCCEEEEeccccCCccccCceEEEee
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
|+|++.+++ ++ +.|+.|++||
T Consensus 557 fs~dg~~l~-s~-------~~D~~i~~Wd 577 (577)
T 2ymu_A 557 FSPDGQTIA-SA-------SSDKTVKLWN 577 (577)
T ss_dssp ECTTSSCEE-EE-------ETTSCEEEEC
T ss_pred EcCCCCEEE-EE-------eCCCEEEEeC
Confidence 999998875 45 6799999997
No 44
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.75 E-value=1.2e-17 Score=103.83 Aligned_cols=99 Identities=18% Similarity=0.215 Sum_probs=75.7
Q ss_pred CcccccCeeeecCCCCc----eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCc--eeeeecceeeeecC
Q psy8803 1 KKSWYEEYKRLDYHTPI----VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPS--KVKYSHDMKTFSWK 74 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~----~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~~ 74 (111)
|+++.|++|++||+... +.+..+.+|...|.+++|+|++++|++++.|++|++||.+... +.. ..... -.
T Consensus 123 as~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~---~~~~h-~~ 198 (330)
T 2hes_X 123 ATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVA---VLNGH-EG 198 (330)
T ss_dssp EEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEE---EECCC-SS
T ss_pred EEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEE---EccCC-CC
Confidence 46788999999999432 5667788999999999999999999999999999999987642 222 11111 14
Q ss_pred ceeeEEEccCC-CEEEEeccccCCccccCceEEEeec
Q psy8803 75 YTQYSQFNESD-TLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 75 ~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
++..++|+|+. ...++++ +.|++|++||+
T Consensus 199 ~v~~~~~~~~~~~~~l~s~-------s~D~~v~iw~~ 228 (330)
T 2hes_X 199 TVWSSDFDKTEGVFRLCSG-------SDDSTVRVWKY 228 (330)
T ss_dssp CEEEEEECCSSSSCEEEEE-------ETTSCEEEEEE
T ss_pred cEEEEEecCCCCeeEEEEE-------eCCCeEEEEEe
Confidence 56678888873 3445666 78999999986
No 45
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.75 E-value=2.2e-17 Score=101.25 Aligned_cols=103 Identities=10% Similarity=0.112 Sum_probs=77.1
Q ss_pred CcccccCeeeecCCCCce--eeeeeecccccEEEEEEcCC-------------CcEEEEEeCCCeEEEEecCCCceee-e
Q psy8803 1 KKSWYEEYKRLDYHTPIV--ETEVLTQHTHQVLHVSFSHN-------------GRYFATCSKDGYILVWTSSYPSKVK-Y 64 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~i~~s~~-------------~~~l~s~~~d~~i~iw~~~~~~~~~-~ 64 (111)
++++.|++|++||++.+. ....+.+|...|.+++|+|+ ++.|++++.|++|++||++...... .
T Consensus 117 ~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~ 196 (297)
T 2pm7_B 117 LVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL 196 (297)
T ss_dssp EEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEE
T ss_pred EEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEE
Confidence 357789999999998653 24567789999999999997 5799999999999999997654211 1
Q ss_pred ecceeeeecCceeeEEEccCC--CEEEEeccccCCccccCceEEEeecC
Q psy8803 65 SHDMKTFSWKYTQYSQFNESD--TLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 65 ~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
......+ -.+++.++|+|++ ..+++++ +.|++|+|||++
T Consensus 197 ~~~l~~H-~~~V~~v~~sp~~~~~~~las~-------s~D~~v~iWd~~ 237 (297)
T 2pm7_B 197 ESTLEGH-SDWVRDVAWSPTVLLRSYMASV-------SQDRTCIIWTQD 237 (297)
T ss_dssp EEEECCC-SSCEEEEEECCCCSSSEEEEEE-------ETTSCEEEEEES
T ss_pred EEEecCC-CCceEEEEECCCCCCceEEEEE-------ECCCcEEEEEeC
Confidence 0011111 2457788899985 4666777 889999999974
No 46
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.75 E-value=1.3e-17 Score=105.67 Aligned_cols=101 Identities=13% Similarity=0.052 Sum_probs=80.8
Q ss_pred CcccccCeeeecCCCCc-------eeeeeeecccccEEEEEEcCCC-cEEEEEeCCCeEEEEecCCCceeeeecceeeee
Q psy8803 1 KKSWYEEYKRLDYHTPI-------VETEVLTQHTHQVLHVSFSHNG-RYFATCSKDGYILVWTSSYPSKVKYSHDMKTFS 72 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~-------~~~~~~~~~~~~v~~i~~s~~~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~ 72 (111)
++++.||+|++||+..+ +++..+.+|...|.+++|+|++ ++|++++.|+.|++||++......... ....
T Consensus 98 ~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~- 175 (402)
T 2aq5_A 98 ASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG-PDVH- 175 (402)
T ss_dssp EEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC-TTTC-
T ss_pred EEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe-cCCC-
Confidence 46788999999999987 6678889999999999999997 799999999999999999876554210 0111
Q ss_pred cCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 73 WKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 73 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
-..+++++|+|++..+++ + +.|+.|++||++
T Consensus 176 ~~~v~~~~~~~~~~~l~~-~-------~~d~~i~iwd~~ 206 (402)
T 2aq5_A 176 PDTIYSVDWSRDGALICT-S-------CRDKRVRVIEPR 206 (402)
T ss_dssp CSCEEEEEECTTSSCEEE-E-------ETTSEEEEEETT
T ss_pred CCceEEEEECCCCCEEEE-E-------ecCCcEEEEeCC
Confidence 246778899998877654 4 679999999975
No 47
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.74 E-value=1.4e-17 Score=106.68 Aligned_cols=101 Identities=10% Similarity=-0.028 Sum_probs=76.4
Q ss_pred CcccccCeeeecCCCCce--eeeeeecccccEEEEEEcC-CCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCcee
Q psy8803 1 KKSWYEEYKRLDYHTPIV--ETEVLTQHTHQVLHVSFSH-NGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQ 77 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~i~~s~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 77 (111)
|+++.||+|+|||+..+. ....+.+|.+.|.+++|+| ++++|++++.|++|++||++..........- .....+.
T Consensus 136 asGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~--~~~~~~~ 213 (435)
T 4e54_B 136 AVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSD--TINIWFC 213 (435)
T ss_dssp EEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCS--SCSCCCC
T ss_pred EEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccC--CCCccEE
Confidence 467899999999998664 4455678999999999998 6899999999999999999875432211000 0012345
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+++|+|++..+ ++| +.++.|++||++
T Consensus 214 ~~~~~~~~~~l-~~g-------~~dg~i~~wd~~ 239 (435)
T 4e54_B 214 SLDVSASSRMV-VTG-------DNVGNVILLNMD 239 (435)
T ss_dssp CEEEETTTTEE-EEE-------CSSSBEEEEESS
T ss_pred EEEECCCCCEE-EEE-------eCCCcEeeeccC
Confidence 78899988776 455 789999999974
No 48
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.74 E-value=4e-17 Score=104.21 Aligned_cols=100 Identities=7% Similarity=0.104 Sum_probs=79.0
Q ss_pred cccccCeeeecCCCCceeeeeeec--ccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQ--HTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~--~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
+++.|+.|++||+++++.+..+.+ |.+.|.+++|+|++++|++++.|+.|++||++......... . . .-.+++.+
T Consensus 187 ~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~-~-~~~~v~~~ 263 (437)
T 3gre_A 187 ALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWS-F-G-DHAPITHV 263 (437)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEB-C-T-TCEEEEEE
T ss_pred EEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEe-c-C-CCCceEEE
Confidence 567899999999999999999988 89999999999999999999999999999999866554210 0 0 01245567
Q ss_pred EEccC---CCEEEEeccccCCccccCceEEEeecC
Q psy8803 80 QFNES---DTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 80 ~~~~~---~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+++|. +..+++++ +.|+.|++||++
T Consensus 264 ~~~~~~s~~~~~l~s~-------~~dg~i~iwd~~ 291 (437)
T 3gre_A 264 EVCQFYGKNSVIVVGG-------SSKTFLTIWNFV 291 (437)
T ss_dssp EECTTTCTTEEEEEEE-------STTEEEEEEETT
T ss_pred EeccccCCCccEEEEE-------cCCCcEEEEEcC
Confidence 66653 34456777 889999999974
No 49
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.74 E-value=6.4e-17 Score=106.13 Aligned_cols=96 Identities=16% Similarity=0.190 Sum_probs=77.4
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
|+++.|++|+|||. +++++..+.+|.+.|.+++|+||+++|++++.|+.|++||... +.... .... -.+++.++
T Consensus 32 as~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~~~-~~~~~---~~~~-~~~v~~~~ 105 (577)
T 2ymu_A 32 ASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QLLQT---LTGH-SSSVRGVA 105 (577)
T ss_dssp EEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CEEEE---ECCC-SSCEEEEE
T ss_pred EEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCC-CEEEE---EECC-CCCEEEEE
Confidence 46788999999995 5788899999999999999999999999999999999999754 33321 1111 24677889
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
|+|++..+++ + +.|+.+++|+.
T Consensus 106 ~s~d~~~l~~-~-------~~d~~~~~~~~ 127 (577)
T 2ymu_A 106 FSPDGQTIAS-A-------SDDKTVKLWNR 127 (577)
T ss_dssp ECTTSSEEEE-E-------ETTSCEEEEET
T ss_pred ECCCCCEEEE-E-------cCCCceeeccc
Confidence 9999888754 4 67889999985
No 50
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.74 E-value=5e-17 Score=100.93 Aligned_cols=98 Identities=15% Similarity=0.116 Sum_probs=77.1
Q ss_pred CcccccCeeeecCCCC-ceee-eeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceee
Q psy8803 1 KKSWYEEYKRLDYHTP-IVET-EVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQY 78 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~-~~~~-~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (111)
++++.||.|++||+.+ +..+ ..+.+|...|.+++|+|++++|++++.|+.+++||++....... ... -.++..
T Consensus 58 ~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~----~~~-~~~v~~ 132 (368)
T 3mmy_A 58 IAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQI----AQH-DAPVKT 132 (368)
T ss_dssp EEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE----EEC-SSCEEE
T ss_pred EEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceee----ccc-cCceEE
Confidence 3578899999999986 4444 67889999999999999999999999999999999998765541 111 145667
Q ss_pred EEE--ccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 79 SQF--NESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 79 v~~--~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
++| +|++..+ +++ +.|+.|++||++
T Consensus 133 ~~~~~~~~~~~l-~~~-------~~dg~i~vwd~~ 159 (368)
T 3mmy_A 133 IHWIKAPNYSCV-MTG-------SWDKTLKFWDTR 159 (368)
T ss_dssp EEEEECSSCEEE-EEE-------ETTSEEEEECSS
T ss_pred EEEEeCCCCCEE-EEc-------cCCCcEEEEECC
Confidence 777 6666554 555 789999999974
No 51
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.73 E-value=1.1e-16 Score=97.75 Aligned_cols=96 Identities=15% Similarity=0.190 Sum_probs=79.0
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
+++.|+.|++||+++++.+..+.+|...|.+++|+|++ .|++++.|+.+++||++....... .. ..-.++..++|
T Consensus 200 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~---~~-~~~~~i~~~~~ 274 (313)
T 3odt_A 200 SCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQV---IT-LPAISIWSVDC 274 (313)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEE---EE-CSSSCEEEEEE
T ss_pred EccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEE---Ee-ccCceEEEEEE
Confidence 56789999999999999999999999999999999999 588999999999999998765542 11 11246778899
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|++..+ + + +.|+.|++||++
T Consensus 275 ~~~~~~~-~-~-------~~dg~i~iw~~~ 295 (313)
T 3odt_A 275 MSNGDII-V-G-------SSDNLVRIFSQE 295 (313)
T ss_dssp CTTSCEE-E-E-------ETTSCEEEEESC
T ss_pred ccCCCEE-E-E-------eCCCcEEEEeCC
Confidence 9988743 3 4 679999999974
No 52
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.73 E-value=8.9e-17 Score=103.25 Aligned_cols=99 Identities=16% Similarity=0.182 Sum_probs=80.1
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++.||+|++||+.+++.+..+.+|.+.|.+++|+|++ .+++++.|+.|++||++++..... .... -.++.+++
T Consensus 136 ~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~---~~~h-~~~v~~l~ 210 (464)
T 3v7d_B 136 ITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHV---FEGH-NSTVRCLD 210 (464)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEE---ECCC-SSCEEEEE
T ss_pred EEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEE---ECCC-CCccEEEE
Confidence 467899999999999999999999999999999999988 999999999999999998765542 1111 24566777
Q ss_pred Ecc-CCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNE-SDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~-~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|++ ++..+++++ +.|+.|++||++
T Consensus 211 ~~~~~~~~~l~s~-------s~d~~i~vwd~~ 235 (464)
T 3v7d_B 211 IVEYKNIKYIVTG-------SRDNTLHVWKLP 235 (464)
T ss_dssp EEESSSCEEEEEE-------ETTSCEEEEECC
T ss_pred EecCCCCCEEEEE-------cCCCcEEEeeCC
Confidence 776 344556777 789999999974
No 53
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.73 E-value=5.5e-17 Score=102.13 Aligned_cols=103 Identities=14% Similarity=0.084 Sum_probs=81.8
Q ss_pred ccccc---CeeeecCCCCceeeeeeec-------------ccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeee
Q psy8803 2 KSWYE---EYKRLDYHTPIVETEVLTQ-------------HTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYS 65 (111)
Q Consensus 2 ~~~~d---~~i~iw~~~~~~~~~~~~~-------------~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~ 65 (111)
+++.| +.|++||+.+++.+..+.+ |...|.+++|+|++++|++++.|+.|++||++........
T Consensus 250 ~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 329 (397)
T 1sq9_A 250 IAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTL 329 (397)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEE
Confidence 45677 9999999999999999988 9999999999999999999999999999999987655421
Q ss_pred c-cee--ee--------------ecCceeeEEEccCCC---------EEEEeccccCCccccCceEEEeecC
Q psy8803 66 H-DMK--TF--------------SWKYTQYSQFNESDT---------LLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 66 ~-~~~--~~--------------~~~~~~~v~~~~~~~---------~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
. ... .. .-.+++.++|+|++. .+++++ +.|+.|++||++
T Consensus 330 ~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~-------~~dg~i~iw~~~ 394 (397)
T 1sq9_A 330 NMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCV-------CLDRSIRWFREA 394 (397)
T ss_dssp ECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEE-------ETTTEEEEEEEE
T ss_pred ecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEe-------cCCCcEEEEEcC
Confidence 1 000 11 025678899999873 345666 789999999974
No 54
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.73 E-value=1.5e-17 Score=114.83 Aligned_cols=102 Identities=9% Similarity=-0.015 Sum_probs=75.0
Q ss_pred CcccccCeeeecCCCCceee----ee--ee-----cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeee-----
Q psy8803 1 KKSWYEEYKRLDYHTPIVET----EV--LT-----QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKY----- 64 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~----~~--~~-----~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~----- 64 (111)
|+++.|++|++||+..++.. .. +. +|...|.+++|+||+++|++++.|+++++|++...+...+
T Consensus 451 aSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~ 530 (902)
T 2oaj_A 451 ITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPE 530 (902)
T ss_dssp EEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC--------
T ss_pred EEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCC
Confidence 46789999999999876421 11 11 7889999999999999999999999999999975421000
Q ss_pred ------------------------------------ecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEe
Q psy8803 65 ------------------------------------SHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVF 108 (111)
Q Consensus 65 ------------------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw 108 (111)
........-.+++.++|+|++ ++++| +.|++|++|
T Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG--~lAsg-------s~D~tv~lw 601 (902)
T 2oaj_A 531 SGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG--FVGIA-------YAAGSLMLI 601 (902)
T ss_dssp -------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS--EEEEE-------ETTSEEEEE
T ss_pred CcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc--EEEEE-------eCCCcEEEE
Confidence 000111122567899999999 45666 889999999
Q ss_pred ecC
Q psy8803 109 SLQ 111 (111)
Q Consensus 109 ~~~ 111 (111)
|++
T Consensus 602 d~~ 604 (902)
T 2oaj_A 602 DRR 604 (902)
T ss_dssp ETT
T ss_pred ECC
Confidence 974
No 55
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.72 E-value=1.7e-16 Score=97.15 Aligned_cols=100 Identities=14% Similarity=0.165 Sum_probs=74.9
Q ss_pred cccCeeeecCCCCceeeeeee--cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee----eecceeeee-----
Q psy8803 4 WYEEYKRLDYHTPIVETEVLT--QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK----YSHDMKTFS----- 72 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~~~~----- 72 (111)
+.|++|+|||+.+++.+..++ +|...|.+++|+|++++|++|+.|+.|++|++++++... |...+....
T Consensus 42 g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~ 121 (318)
T 4ggc_A 42 ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYI 121 (318)
T ss_dssp EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTE
T ss_pred EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCE
Confidence 358999999999998777665 677889999999999999999999999999998764432 111111100
Q ss_pred ----------------------------cCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 73 ----------------------------WKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 73 ----------------------------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
...+..+++.+.+..++ ++ +.|+.|++||++
T Consensus 122 l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-s~-------~~d~~i~iwd~~ 180 (318)
T 4ggc_A 122 LSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLA-SG-------GNDNLVNVWPSA 180 (318)
T ss_dssp EEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEE-EE-------ETTSCEEEEESS
T ss_pred EEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEE-EE-------ecCcceeEEECC
Confidence 11235667888887764 45 679999999974
No 56
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.72 E-value=9.6e-17 Score=98.67 Aligned_cols=102 Identities=11% Similarity=0.121 Sum_probs=77.5
Q ss_pred CcccccCeeeecCCCCc----eeeeeeecccccEEEEEEcC--CCcEEEEEeCCCeEEEEecCCCcee------eeecce
Q psy8803 1 KKSWYEEYKRLDYHTPI----VETEVLTQHTHQVLHVSFSH--NGRYFATCSKDGYILVWTSSYPSKV------KYSHDM 68 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~----~~~~~~~~~~~~v~~i~~s~--~~~~l~s~~~d~~i~iw~~~~~~~~------~~~~~~ 68 (111)
|+++.||.|++||+..+ +....+.+|...|.+++|+| ++++|++++.|+.+++||++..... ......
T Consensus 27 ~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~ 106 (351)
T 3f3f_A 27 ATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTL 106 (351)
T ss_dssp EEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEE
T ss_pred EEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeee
Confidence 46788999999999866 46677789999999999999 6999999999999999999875211 000011
Q ss_pred eeeecCceeeEEEccC--CCEEEEeccccCCccccCceEEEeecC
Q psy8803 69 KTFSWKYTQYSQFNES--DTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 69 ~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.. .-.++..++|+|+ +..++ ++ +.|+.|++||++
T Consensus 107 ~~-~~~~v~~~~~~~~~~~~~l~-~~-------~~dg~v~iwd~~ 142 (351)
T 3f3f_A 107 ND-SKGSLYSVKFAPAHLGLKLA-CL-------GNDGILRLYDAL 142 (351)
T ss_dssp CC-CSSCEEEEEECCGGGCSEEE-EE-------ETTCEEEEEECS
T ss_pred cc-cCCceeEEEEcCCCCCcEEE-Ee-------cCCCcEEEecCC
Confidence 11 1245778889998 76664 44 679999999974
No 57
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.72 E-value=5.4e-18 Score=106.28 Aligned_cols=99 Identities=13% Similarity=0.180 Sum_probs=74.1
Q ss_pred CcccccCeeeecCCCCc--eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCc---eeeeecceeeeecCc
Q psy8803 1 KKSWYEEYKRLDYHTPI--VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPS---KVKYSHDMKTFSWKY 75 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~--~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~---~~~~~~~~~~~~~~~ 75 (111)
|+++.|+.|++||+.++ +.+..+.+|...|.+++|+|++++|++++.|+.+++||+.... .... .... -.+
T Consensus 27 ~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~---~~~~-~~~ 102 (377)
T 3dwl_C 27 VTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLV---LLRL-NRA 102 (377)
T ss_dssp ECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEE---CCCC-SSC
T ss_pred EEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeE---eccc-CCc
Confidence 46678999999999987 7888889999999999999999999999999999999998755 1111 1111 145
Q ss_pred eeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 76 TQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+.+++|+|++..++ ++ +.|+.|++||++
T Consensus 103 v~~~~~~~~~~~l~-~~-------~~d~~i~iwd~~ 130 (377)
T 3dwl_C 103 ATFVRWSPNEDKFA-VG-------SGARVISVCYFE 130 (377)
T ss_dssp EEEEECCTTSSCCE-EE-------ESSSCEEECCC-
T ss_pred eEEEEECCCCCEEE-EE-------ecCCeEEEEEEC
Confidence 66788888887764 44 679999999974
No 58
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.72 E-value=1.3e-17 Score=103.41 Aligned_cols=102 Identities=16% Similarity=0.153 Sum_probs=79.0
Q ss_pred cccccCeeeecCCCCceeeeeee-----cccccEEEEEEcCCCc-EEEEEeCCCeEEEEecCCCcee-------------
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLT-----QHTHQVLHVSFSHNGR-YFATCSKDGYILVWTSSYPSKV------------- 62 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~-----~~~~~v~~i~~s~~~~-~l~s~~~d~~i~iw~~~~~~~~------------- 62 (111)
+++.||.|++||+++++....+. +|...|.+++|+|+++ +|++++.|+.+++||++.....
T Consensus 229 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~ 308 (357)
T 3i2n_A 229 ATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVA 308 (357)
T ss_dssp EEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCC
T ss_pred EECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccc
Confidence 56789999999998876655554 8999999999999988 8999999999999999754221
Q ss_pred ---eeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 63 ---KYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 63 ---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
......... -.++..++|+|++..+++++ +.|+.|++||++
T Consensus 309 ~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~s~-------~~d~~i~iw~~~ 352 (357)
T 3i2n_A 309 GSVSLLQNVTLS-TQPISSLDWSPDKRGLCVCS-------SFDQTVRVLIVT 352 (357)
T ss_dssp CEEEEEEEEECC-SSCEEEEEECSSSTTEEEEE-------ETTSEEEEEEEC
T ss_pred cccceeeccccC-CCCeeEEEEcCCCCeEEEEe-------cCCCcEEEEECC
Confidence 000011111 24677899999999887677 889999999974
No 59
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.72 E-value=1.9e-17 Score=108.89 Aligned_cols=100 Identities=11% Similarity=0.034 Sum_probs=75.9
Q ss_pred CcccccCeeeecCCCCc-eeeeeeecccccEEEE--EEcCCC-cEEEEEeCCCeEEEEecCCCceeeeecceeee-ecCc
Q psy8803 1 KKSWYEEYKRLDYHTPI-VETEVLTQHTHQVLHV--SFSHNG-RYFATCSKDGYILVWTSSYPSKVKYSHDMKTF-SWKY 75 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~-~~~~~~~~~~~~v~~i--~~s~~~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~-~~~~ 75 (111)
++++.||+|++||+.++ .+...+.+|...|.++ .|+|++ ++|++++.|+++++||++....... .... ....
T Consensus 281 asgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~---~~~~~~~~~ 357 (524)
T 2j04_B 281 VCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKT---TVSRFRGSN 357 (524)
T ss_dssp EEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCE---EEEECSCCS
T ss_pred EEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccc---cccccccCc
Confidence 46889999999999876 4556688999999999 578887 8999999999999999987543221 0000 0012
Q ss_pred eeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 76 TQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+.+++|+|++..+ +++ +.|++|++||++
T Consensus 358 v~~v~fsp~~~~l-~s~-------~~d~tv~lwd~~ 385 (524)
T 2j04_B 358 LVPVVYCPQIYSY-IYS-------DGASSLRAVPSR 385 (524)
T ss_dssp CCCEEEETTTTEE-EEE-------CSSSEEEEEETT
T ss_pred ccceEeCCCcCeE-EEe-------CCCCcEEEEECc
Confidence 4578999988775 444 678899999975
No 60
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.72 E-value=4.5e-18 Score=111.79 Aligned_cols=98 Identities=9% Similarity=0.045 Sum_probs=78.3
Q ss_pred CcccccCeeeecCCCCceeeeeeecccc--cEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceee
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTH--QVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQY 78 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~--~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (111)
|+++.|++|+|||+++++....+.+|.. .|.+++|+|+++.|++++.|+++++||++...+... .... -.++++
T Consensus 327 aS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~---l~gH-~~~V~s 402 (524)
T 2j04_B 327 STVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHP---LVSR-ETTITA 402 (524)
T ss_dssp EEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEE---EEEC-SSCEEE
T ss_pred EEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccccccee---eecC-CCceEE
Confidence 4788999999999998887777777753 588999999999999999999999999988654331 1111 246677
Q ss_pred EEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 79 SQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
++|+|++..+ ++| +.|++|++||+
T Consensus 403 va~Sp~g~~l-~Sg-------s~Dgtv~lwd~ 426 (524)
T 2j04_B 403 IGVSRLHPMV-LAG-------SADGSLIITNA 426 (524)
T ss_dssp EECCSSCCBC-EEE-------ETTTEEECCBS
T ss_pred EEeCCCCCeE-EEE-------ECCCEEEEEec
Confidence 8889988765 566 78999999986
No 61
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.72 E-value=1.1e-16 Score=101.54 Aligned_cols=101 Identities=11% Similarity=0.108 Sum_probs=80.8
Q ss_pred cccccCeeeecCCC-CceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 2 KSWYEEYKRLDYHT-PIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 2 ~~~~d~~i~iw~~~-~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
+++.|+.|++||++ .+..+..+.+|.+.|.+++|+|++++|++++.|+.+++||++........ ... -.++..++
T Consensus 191 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~---~~~-~~~v~~~~ 266 (401)
T 4aez_A 191 SGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTK---TNH-NAAVKAVA 266 (401)
T ss_dssp EEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEE---CCC-SSCCCEEE
T ss_pred EEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEe---cCC-cceEEEEE
Confidence 56789999999998 56678888899999999999999999999999999999999986655421 111 14567888
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|++..+++++. ++.|+.|++||++
T Consensus 267 ~~p~~~~ll~~~~-----gs~d~~i~i~d~~ 292 (401)
T 4aez_A 267 WCPWQSNLLATGG-----GTMDKQIHFWNAA 292 (401)
T ss_dssp ECTTSTTEEEEEC-----CTTTCEEEEEETT
T ss_pred ECCCCCCEEEEec-----CCCCCEEEEEECC
Confidence 9998777777650 0379999999974
No 62
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.72 E-value=6.8e-17 Score=100.70 Aligned_cols=101 Identities=7% Similarity=0.054 Sum_probs=76.0
Q ss_pred CcccccCeeeecCCCCceee-eeeec-ccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCce--
Q psy8803 1 KKSWYEEYKRLDYHTPIVET-EVLTQ-HTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYT-- 76 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~-~~~~~-~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~-- 76 (111)
|+++.||.|++||+++++.+ ..+.+ |.+.|.+++|+|++.+|++++.+ .|++||++............... .++
T Consensus 186 asg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~~~~~~~~~~~~-~~~~~ 263 (343)
T 3lrv_A 186 ALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDVGTLAYPTYTIPE-FKTGT 263 (343)
T ss_dssp EEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSSTTCBSSCCCBC------CC
T ss_pred EEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCcceeeccccccc-ccccc
Confidence 35689999999999998877 77887 99999999999999999999955 99999998765432111100000 111
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
..++|+|++.++++.+ +.++.|++|++
T Consensus 264 ~~~~~~~~g~~l~~~s-------~~d~~i~v~~~ 290 (343)
T 3lrv_A 264 VTYDIDDSGKNMIAYS-------NESNSLTIYKF 290 (343)
T ss_dssp EEEEECTTSSEEEEEE-------TTTTEEEEEEE
T ss_pred eEEEECCCCCEEEEec-------CCCCcEEEEEE
Confidence 3589999999887654 44888999986
No 63
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.72 E-value=5.8e-17 Score=102.73 Aligned_cols=103 Identities=16% Similarity=0.114 Sum_probs=76.3
Q ss_pred cccccCeeeecCCCCc----eeeeeeecccccEEEEEEcC-CCcEEEEEeCCCeEEEEecCCCceeee-ecce--eeeec
Q psy8803 2 KSWYEEYKRLDYHTPI----VETEVLTQHTHQVLHVSFSH-NGRYFATCSKDGYILVWTSSYPSKVKY-SHDM--KTFSW 73 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~----~~~~~~~~~~~~v~~i~~s~-~~~~l~s~~~d~~i~iw~~~~~~~~~~-~~~~--~~~~~ 73 (111)
+++.||.|++|++... ..+..+.+|.+.|.+++|+| ++++|++++.|+.|++|++........ ...+ ....-
T Consensus 52 ~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~ 131 (402)
T 2aq5_A 52 EASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT 131 (402)
T ss_dssp CCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCS
T ss_pred EEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCC
Confidence 4678999999999654 23456778999999999999 899999999999999999987522100 0001 11112
Q ss_pred CceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 74 KYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 74 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
..+.+++|+|++..+++++ +.|+.|++||++
T Consensus 132 ~~v~~~~~~p~~~~~l~s~-------~~dg~i~iwd~~ 162 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSA-------GCDNVILVWDVG 162 (402)
T ss_dssp SCEEEEEECSSBTTEEEEE-------ETTSCEEEEETT
T ss_pred CeEEEEEECcCCCCEEEEE-------cCCCEEEEEECC
Confidence 4567888999885455666 789999999974
No 64
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.72 E-value=1.7e-17 Score=106.34 Aligned_cols=101 Identities=19% Similarity=0.097 Sum_probs=76.3
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCc-EEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGR-YFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
++++.||+|++||++ ++.+..+.+|...|.+++|+|++. +|++++.|+.|++||++.............. -.+++++
T Consensus 225 ~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h-~~~v~~~ 302 (435)
T 4e54_B 225 VTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPH-RHPVNAA 302 (435)
T ss_dssp EEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBC-SSCEEEC
T ss_pred EEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeec-cccccce
Confidence 356789999999987 566778899999999999999865 7889999999999999875432210001111 1356677
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|+|++..++ ++ +.|+.|+|||++
T Consensus 303 ~~spdg~~l~-s~-------~~D~~i~iwd~~ 326 (435)
T 4e54_B 303 CFSPDGARLL-TT-------DQKSEIRVYSAS 326 (435)
T ss_dssp CBCTTSSEEE-EE-------ESSSCEEEEESS
T ss_pred eECCCCCeeE-EE-------cCCCEEEEEECC
Confidence 8889888765 45 789999999974
No 65
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.71 E-value=1.8e-16 Score=100.55 Aligned_cols=100 Identities=14% Similarity=0.167 Sum_probs=74.4
Q ss_pred CcccccCeeeecCCCCc------------eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecce
Q psy8803 1 KKSWYEEYKRLDYHTPI------------VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDM 68 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~------------~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~ 68 (111)
++++.|++|++||+... .+...+.+|...|.+++|+|++.+|++++.|+.+++||.+++..... .
T Consensus 272 ~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~---l 348 (393)
T 1erj_A 272 VSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLM---L 348 (393)
T ss_dssp EEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEE---E
T ss_pred EEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEE---E
Confidence 35678999999999753 34567788999999999999999999999999999999988765431 1
Q ss_pred eeeecCceeeEEEccC-----CCEEEEeccccCCccccCceEEEeecC
Q psy8803 69 KTFSWKYTQYSQFNES-----DTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 69 ~~~~~~~~~~v~~~~~-----~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
... -..+..++|++. +..++++| +.|+.|+||+++
T Consensus 349 ~~h-~~~v~~v~~~~~~~~~p~~~~l~sg-------s~Dg~i~iW~~~ 388 (393)
T 1erj_A 349 QGH-RNSVISVAVANGSSLGPEYNVFATG-------SGDCKARIWKYK 388 (393)
T ss_dssp ECC-SSCEEEEEECSSCTTCTTCEEEEEE-------ETTSEEEEEEEE
T ss_pred CCC-CCCEEEEEecCCcCcCCCCCEEEEE-------CCCCcEEECccc
Confidence 111 134555666652 34556777 889999999973
No 66
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.71 E-value=3e-17 Score=102.87 Aligned_cols=102 Identities=19% Similarity=0.082 Sum_probs=70.7
Q ss_pred CcccccCeeeecCCCCce---eeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCcee
Q psy8803 1 KKSWYEEYKRLDYHTPIV---ETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQ 77 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~---~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 77 (111)
++++.|++|++||+.+++ ....+.+|...|.+++|+|+++.|++++.|+.+++||++..........+....-.+++
T Consensus 71 ~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~ 150 (377)
T 3dwl_C 71 VTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTIL 150 (377)
T ss_dssp EEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEE
T ss_pred EEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeE
Confidence 356789999999999876 67777889999999999999999999999999999999875421100011110124677
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+++|+|++..++ ++ +.|+.|++||+
T Consensus 151 ~~~~~~~~~~l~-~~-------~~d~~i~iwd~ 175 (377)
T 3dwl_C 151 SLDWHPNNVLLA-AG-------CADRKAYVLSA 175 (377)
T ss_dssp EEEECTTSSEEE-EE-------ESSSCEEEEEE
T ss_pred EEEEcCCCCEEE-EE-------eCCCEEEEEEE
Confidence 889999887764 45 67999999997
No 67
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.71 E-value=1.5e-16 Score=100.29 Aligned_cols=55 Identities=16% Similarity=0.148 Sum_probs=46.0
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
+++.|++|+|||..+++++..+. |.+.|.+++|+||++++++++.++ +.+|+...
T Consensus 152 s~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~ 206 (365)
T 4h5i_A 152 SSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVT 206 (365)
T ss_dssp ESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTT
T ss_pred ECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEecc
Confidence 56789999999999999888876 788999999999999999998665 45555443
No 68
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.71 E-value=7.2e-17 Score=106.18 Aligned_cols=98 Identities=15% Similarity=0.078 Sum_probs=80.6
Q ss_pred CcccccCeeeecCCCCceeeeeeec-ccccEEEEEEcC----------CCcEEEEEeCCCeEEEEecCCC-ceeeeecce
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQ-HTHQVLHVSFSH----------NGRYFATCSKDGYILVWTSSYP-SKVKYSHDM 68 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~-~~~~v~~i~~s~----------~~~~l~s~~~d~~i~iw~~~~~-~~~~~~~~~ 68 (111)
++++.|+.|++||+.+++.+..+.+ |...|.+++|+| ++++|++++.|+.|++||++.. ..... .
T Consensus 504 ~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~---~ 580 (615)
T 1pgu_A 504 AAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKA---L 580 (615)
T ss_dssp EEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEE---T
T ss_pred EEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechh---h
Confidence 3567899999999999999998888 999999999999 9999999999999999999876 33331 1
Q ss_pred eeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 69 KTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 69 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
... -.+++.++|+|++. + +++ +.|+.|++||++
T Consensus 581 ~~h-~~~v~~l~~s~~~~-l-~s~-------~~d~~v~iw~~~ 613 (615)
T 1pgu_A 581 NAH-KDGVNNLLWETPST-L-VSS-------GADACIKRWNVV 613 (615)
T ss_dssp TSS-TTCEEEEEEEETTE-E-EEE-------ETTSCEEEEEEC
T ss_pred hcC-ccceEEEEEcCCCC-e-EEe-------cCCceEEEEeee
Confidence 111 24677888999988 4 555 789999999984
No 69
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.71 E-value=6.8e-17 Score=102.15 Aligned_cols=99 Identities=14% Similarity=0.223 Sum_probs=79.1
Q ss_pred cccccC---eeeecCCCCc-eeeeeee-cccccEEEEEEcC-CCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCc
Q psy8803 2 KSWYEE---YKRLDYHTPI-VETEVLT-QHTHQVLHVSFSH-NGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKY 75 (111)
Q Consensus 2 ~~~~d~---~i~iw~~~~~-~~~~~~~-~~~~~v~~i~~s~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~ 75 (111)
+++.|+ .|++||++.+ +++..+. +|...|.+++|+| ++++|++++.|+.+++||++....... .... -.+
T Consensus 232 ~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~---~~~~-~~~ 307 (416)
T 2pm9_A 232 TATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQ---FPAR-GNW 307 (416)
T ss_dssp EEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEE---EECS-SSC
T ss_pred EEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcccee---ecCC-CCc
Confidence 455676 9999999986 6777777 8999999999999 899999999999999999988765542 1111 145
Q ss_pred eeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 76 TQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+..++|+|++..+++++ +.|+.|++||++
T Consensus 308 v~~~~~s~~~~~~l~s~-------~~d~~i~iw~~~ 336 (416)
T 2pm9_A 308 CFKTKFAPEAPDLFACA-------SFDNKIEVQTLQ 336 (416)
T ss_dssp CCCEEECTTCTTEEEEC-------CSSSEEEEEESC
T ss_pred eEEEEECCCCCCEEEEE-------ecCCcEEEEEcc
Confidence 66788999885455666 789999999974
No 70
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.71 E-value=1.9e-16 Score=97.32 Aligned_cols=59 Identities=19% Similarity=0.262 Sum_probs=52.6
Q ss_pred CcccccCeeeecCCCCc---------eeeeeeecccccEEEEEEcCC--CcEEEEEeCCCeEEEEecCCC
Q psy8803 1 KKSWYEEYKRLDYHTPI---------VETEVLTQHTHQVLHVSFSHN--GRYFATCSKDGYILVWTSSYP 59 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~---------~~~~~~~~~~~~v~~i~~s~~--~~~l~s~~~d~~i~iw~~~~~ 59 (111)
++++.|++|++||+..+ +.+..+.+|...|.+++|+|+ +++|++++.|+.+++||++..
T Consensus 75 ~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~ 144 (351)
T 3f3f_A 75 ASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEP 144 (351)
T ss_dssp EEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSST
T ss_pred EEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCCh
Confidence 35788999999999876 557778899999999999999 999999999999999998754
No 71
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.70 E-value=4.2e-16 Score=96.78 Aligned_cols=103 Identities=17% Similarity=0.139 Sum_probs=82.7
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||++........ . .-.++..++
T Consensus 48 ~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~--~~~~v~~~~ 122 (369)
T 3zwl_B 48 FSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATW---K--SPVPVKRVE 122 (369)
T ss_dssp EEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEE---E--CSSCEEEEE
T ss_pred EEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe---e--cCCCeEEEE
Confidence 35678999999999999999999999999999999999999999999999999999987665421 1 124677889
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|++..+++++.+.. ..++.|++||++
T Consensus 123 ~~~~~~~l~~~~~~~~---~~~g~i~~~d~~ 150 (369)
T 3zwl_B 123 FSPCGNYFLAILDNVM---KNPGSINIYEIE 150 (369)
T ss_dssp ECTTSSEEEEEECCBT---TBCCEEEEEEEE
T ss_pred EccCCCEEEEecCCcc---CCCCEEEEEEec
Confidence 9999988876541111 123899999963
No 72
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.70 E-value=1.1e-16 Score=110.55 Aligned_cols=101 Identities=12% Similarity=0.187 Sum_probs=78.6
Q ss_pred CcccccCeeeecCCCCc---------------------------------------------eeeeeeecccccEEEEEE
Q psy8803 1 KKSWYEEYKRLDYHTPI---------------------------------------------VETEVLTQHTHQVLHVSF 35 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~---------------------------------------------~~~~~~~~~~~~v~~i~~ 35 (111)
|+++.||+|+||++.++ +++..+.+|.+.|.+++|
T Consensus 504 Asgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svaf 583 (902)
T 2oaj_A 504 AVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINN 583 (902)
T ss_dssp EEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEE
T ss_pred EEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEe
Confidence 56789999999999755 236677889999999999
Q ss_pred cCCCcEEEEEeCCCeEEEEecCCCceeeeecceee---eecCceeeEEEc-----cCC--CEEEEeccccCCccccCceE
Q psy8803 36 SHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKT---FSWKYTQYSQFN-----ESD--TLLLVSGVHFGTPQSTSGEI 105 (111)
Q Consensus 36 s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~---~~~~~~~~v~~~-----~~~--~~~~~~~~~~~~~~~~~~~i 105 (111)
+||| +|++|+.|++|++||++....... ..+.. ..-..+++++|+ |++ ...+++| +.|++|
T Consensus 584 SpdG-~lAsgs~D~tv~lwd~~~~~~~~~-~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sg-------s~D~tv 654 (902)
T 2oaj_A 584 SNIG-FVGIAYAAGSLMLIDRRGPAIIYM-ENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCG-------TDMGEV 654 (902)
T ss_dssp CBTS-EEEEEETTSEEEEEETTTTEEEEE-EEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEE-------ETTSEE
T ss_pred cCCc-EEEEEeCCCcEEEEECCCCeEEEE-eehhHhccccccceEEEEEEEEecCCCCCcceEEEEE-------ecCCcE
Confidence 9999 999999999999999987655431 01110 111347788999 886 4566777 889999
Q ss_pred EEeec
Q psy8803 106 AVFSL 110 (111)
Q Consensus 106 ~iw~~ 110 (111)
++||+
T Consensus 655 ~~wd~ 659 (902)
T 2oaj_A 655 ITYKI 659 (902)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99997
No 73
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.70 E-value=1.8e-16 Score=99.68 Aligned_cols=96 Identities=23% Similarity=0.131 Sum_probs=77.4
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCc-EEEEEeCCCeEEEEecCC----CceeeeecceeeeecCce
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGR-YFATCSKDGYILVWTSSY----PSKVKYSHDMKTFSWKYT 76 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~-~l~s~~~d~~i~iw~~~~----~~~~~~~~~~~~~~~~~~ 76 (111)
+++.|+.|++||++ ++.+..+.+|...|.+++|+|+++ +|++++.|+.|++||++. ...... ... -.++
T Consensus 180 ~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~----~~~-~~~v 253 (383)
T 3ei3_B 180 TGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAE----MPH-EKPV 253 (383)
T ss_dssp EEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEE----EEC-SSCE
T ss_pred EECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEE----ecC-CCce
Confidence 56789999999994 778888999999999999999998 999999999999999986 333221 111 2467
Q ss_pred eeEEEcc-CCCEEEEeccccCCccccCceEEEeecC
Q psy8803 77 QYSQFNE-SDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 77 ~~v~~~~-~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
..++|+| ++..++ ++ +.|+.|++||++
T Consensus 254 ~~~~~s~~~~~~l~-~~-------~~d~~i~iwd~~ 281 (383)
T 3ei3_B 254 NAAYFNPTDSTKLL-TT-------DQRNEIRVYSSY 281 (383)
T ss_dssp EEEEECTTTSCEEE-EE-------ESSSEEEEEETT
T ss_pred EEEEEcCCCCCEEE-EE-------cCCCcEEEEECC
Confidence 7889999 777664 55 679999999974
No 74
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.70 E-value=3.4e-16 Score=98.53 Aligned_cols=102 Identities=13% Similarity=0.225 Sum_probs=81.1
Q ss_pred cccccCeeeecCCCCceeeeeeec---c---cccEEEEEEcCCCcEEEEEeCC---CeEEEEecCCCceeeeeccee--e
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQ---H---THQVLHVSFSHNGRYFATCSKD---GYILVWTSSYPSKVKYSHDMK--T 70 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~---~---~~~v~~i~~s~~~~~l~s~~~d---~~i~iw~~~~~~~~~~~~~~~--~ 70 (111)
+++.|+.|++||+++++.+..+.. | ...|.+++|+|++++|++++.| +.|++||++............ .
T Consensus 202 ~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~ 281 (397)
T 1sq9_A 202 TGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSS 281 (397)
T ss_dssp EECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC----
T ss_pred EEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccc
Confidence 567899999999999999999998 8 9999999999999999999999 999999998876554211100 0
Q ss_pred -------eecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 71 -------FSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 71 -------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
..-.++..++|+|++..++ ++ +.|+.|++||++
T Consensus 282 ~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-------~~dg~i~iwd~~ 321 (397)
T 1sq9_A 282 QASLGEFAHSSWVMSLSFNDSGETLC-SA-------GWDGKLRFWDVK 321 (397)
T ss_dssp ----CCBSBSSCEEEEEECSSSSEEE-EE-------ETTSEEEEEETT
T ss_pred cccccccccCCcEEEEEECCCCCEEE-EE-------eCCCeEEEEEcC
Confidence 0125677899999888765 44 679999999974
No 75
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.70 E-value=2.4e-16 Score=106.86 Aligned_cols=99 Identities=16% Similarity=0.143 Sum_probs=82.5
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
|+++.||.|++||+.+++.+..+.+|...|.+++|+|+++.|++++.|+.|++||+.++..... .... -.++.+++
T Consensus 29 a~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~---~~~~-~~~v~~~~ 104 (814)
T 3mkq_A 29 LTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVD---FEAH-PDYIRSIA 104 (814)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEE---EECC-SSCEEEEE
T ss_pred EEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE---EecC-CCCEEEEE
Confidence 3567899999999999999999999999999999999999999999999999999988765542 1111 14567888
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|++..++ ++ +.|+.|++||++
T Consensus 105 ~s~~~~~l~-~~-------~~dg~i~vw~~~ 127 (814)
T 3mkq_A 105 VHPTKPYVL-SG-------SDDLTVKLWNWE 127 (814)
T ss_dssp ECSSSSEEE-EE-------ETTSEEEEEEGG
T ss_pred EeCCCCEEE-EE-------cCCCEEEEEECC
Confidence 999998875 44 679999999973
No 76
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.70 E-value=3.6e-16 Score=99.77 Aligned_cols=95 Identities=11% Similarity=0.115 Sum_probs=75.8
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEe--CCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCS--KDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++.|++|++||+.+++....+..| ..+..+.|+++++.+++++ .|+.|++||+++...+.. ...+. .++++++
T Consensus 297 gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~---l~gH~-~~V~~l~ 371 (420)
T 4gga_A 297 GTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAE---LKGHT-SRVLSLT 371 (420)
T ss_dssp CTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEE---ECCCS-SCEEEEE
T ss_pred ecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEE---EcCCC-CCEEEEE
Confidence 568999999999999988888754 5788899999988877764 789999999998776542 22222 4677888
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
|+|++..+ ++| +.|++|+|||+
T Consensus 372 ~spdg~~l-~S~-------s~D~tvriWdv 393 (420)
T 4gga_A 372 MSPDGATV-ASA-------AADETLRLWRC 393 (420)
T ss_dssp ECTTSSCE-EEE-------ETTTEEEEECC
T ss_pred EcCCCCEE-EEE-------ecCCeEEEEEC
Confidence 99998876 455 78999999997
No 77
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.70 E-value=1.6e-16 Score=101.76 Aligned_cols=100 Identities=16% Similarity=0.256 Sum_probs=78.2
Q ss_pred CcccccCeeeecCCCCce-------eeeeeecccccEEEEEEcC-CCcEEEEEeCCCeEEEEecCCCc---eeeeeccee
Q psy8803 1 KKSWYEEYKRLDYHTPIV-------ETEVLTQHTHQVLHVSFSH-NGRYFATCSKDGYILVWTSSYPS---KVKYSHDMK 69 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~-------~~~~~~~~~~~v~~i~~s~-~~~~l~s~~~d~~i~iw~~~~~~---~~~~~~~~~ 69 (111)
++++.||+|++|++..+. ....+.+|...|.+++|+| ++.+|++++.|+.|++||++... ... ...
T Consensus 198 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~---~~~ 274 (430)
T 2xyi_A 198 LSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSH---TVD 274 (430)
T ss_dssp EEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSE---EEE
T ss_pred EEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCccee---Eee
Confidence 357789999999998732 2456678999999999999 68899999999999999998752 221 111
Q ss_pred eeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 70 TFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 70 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.. -.++++++|+|.+..++++| +.++.|++||++
T Consensus 275 ~~-~~~v~~i~~~p~~~~~l~tg-------~~dg~v~vwd~~ 308 (430)
T 2xyi_A 275 AH-TAEVNCLSFNPYSEFILATG-------SADKTVALWDLR 308 (430)
T ss_dssp CC-SSCEEEEEECSSCTTEEEEE-------ETTSEEEEEETT
T ss_pred cC-CCCeEEEEeCCCCCCEEEEE-------eCCCeEEEEeCC
Confidence 11 24677889999888777777 889999999985
No 78
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.69 E-value=2.7e-16 Score=110.67 Aligned_cols=100 Identities=21% Similarity=0.296 Sum_probs=82.6
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
|+++.||+|++||..+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.++..... .... -.++.+++
T Consensus 631 ~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~---~~~~-~~~v~~~~ 706 (1249)
T 3sfz_A 631 ASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHT---YDEH-SEQVNCCH 706 (1249)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE---EECC-SSCEEEEE
T ss_pred EEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEE---EcCC-CCcEEEEE
Confidence 3568899999999999999999999999999999999999999999999999999998765542 1111 24566788
Q ss_pred EccC-CCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNES-DTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~-~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|+ ...+++++ +.|+.|++||++
T Consensus 707 ~~~~~~~~~l~sg-------~~d~~v~vwd~~ 731 (1249)
T 3sfz_A 707 FTNKSNHLLLATG-------SNDFFLKLWDLN 731 (1249)
T ss_dssp ECSSSSCCEEEEE-------ETTSCEEEEETT
T ss_pred EecCCCceEEEEE-------eCCCeEEEEECC
Confidence 8885 34556777 889999999974
No 79
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.69 E-value=1.5e-16 Score=101.01 Aligned_cols=103 Identities=8% Similarity=-0.075 Sum_probs=75.1
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCC-cEEEEEeCCCeEEEEecCCCceeee--------eccee--
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNG-RYFATCSKDGYILVWTSSYPSKVKY--------SHDMK-- 69 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~-~~l~s~~~d~~i~iw~~~~~~~~~~--------~~~~~-- 69 (111)
|+++.|++|+|||+.++.++..+.+|.+.+.+++|+|++ ++|++++.|+.|++||++....... ...+.
T Consensus 160 as~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~ 239 (393)
T 4gq1_A 160 ASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTL 239 (393)
T ss_dssp EEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEE
T ss_pred EEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEec
Confidence 467899999999999888888888899999999999986 5899999999999999987532210 00000
Q ss_pred -----------eeecCceeeEEEcc-CCCEEEEeccccCCccccCceEEEeecC
Q psy8803 70 -----------TFSWKYTQYSQFNE-SDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 70 -----------~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
......+..++|.+ ++.. ++++ +.|+.+++||++
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~-l~s~-------s~d~~i~vwd~~ 285 (393)
T 4gq1_A 240 NTLPLVNTCHSSGIASSLANVRWIGSDGSG-ILAM-------CKSGAWLRWNLF 285 (393)
T ss_dssp ESGGGC------CCSSSCSEEEEETTTTCE-EEEE-------CTTSEEEEEEC-
T ss_pred ccccceeeeecccccccceeeeeecCCCCE-EEEE-------eCCCCEEEEECc
Confidence 01112356777775 5555 4566 789999999974
No 80
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.69 E-value=1.6e-16 Score=101.77 Aligned_cols=99 Identities=17% Similarity=0.174 Sum_probs=78.5
Q ss_pred cccccCeeeecCCCCc---eeeeeeecccccEEEEEEcCCCc-EEEEEeCCCeEEEEecCCCc-eeeeecceeeeecCce
Q psy8803 2 KSWYEEYKRLDYHTPI---VETEVLTQHTHQVLHVSFSHNGR-YFATCSKDGYILVWTSSYPS-KVKYSHDMKTFSWKYT 76 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~---~~~~~~~~~~~~v~~i~~s~~~~-~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~ 76 (111)
+++.|+.|++||++.+ +.+..+..|...|.+++|+|++. +|++++.|+.|++||++... .... .... -.++
T Consensus 249 s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~---~~~h-~~~v 324 (430)
T 2xyi_A 249 SVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---FESH-KDEI 324 (430)
T ss_dssp EEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEE---EECC-SSCE
T ss_pred EEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEE---eecC-CCCE
Confidence 5678999999999976 56777788999999999999876 79999999999999998732 2221 1111 2456
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
..++|+|++..+++++ +.|+.|+|||++
T Consensus 325 ~~i~~sp~~~~~l~s~-------~~d~~i~iwd~~ 352 (430)
T 2xyi_A 325 FQVQWSPHNETILASS-------GTDRRLHVWDLS 352 (430)
T ss_dssp EEEEECSSCTTEEEEE-------ETTSCCEEEEGG
T ss_pred EEEEECCCCCCEEEEE-------eCCCcEEEEeCC
Confidence 7888999887767777 789999999974
No 81
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.69 E-value=8e-17 Score=101.81 Aligned_cols=103 Identities=15% Similarity=0.164 Sum_probs=79.1
Q ss_pred CcccccCeeeecCCCC----ceeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCc------eeeeeccee
Q psy8803 1 KKSWYEEYKRLDYHTP----IVETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPS------KVKYSHDMK 69 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~----~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~------~~~~~~~~~ 69 (111)
++++.|+.|++||+.. .+.+..+.+|...|.+++|+|+ +++|++++.|+.|++||++... .........
T Consensus 83 ~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 162 (416)
T 2pm9_A 83 AGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSM 162 (416)
T ss_dssp EEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSC
T ss_pred EEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccccccc
Confidence 3567899999999987 3577888899999999999998 8999999999999999998765 221110111
Q ss_pred eeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 70 TFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 70 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.. -.++.+++|+|++..+++++ +.++.|++||++
T Consensus 163 ~~-~~~v~~~~~~~~~~~~l~~~-------~~dg~v~iwd~~ 196 (416)
T 2pm9_A 163 SS-VDEVISLAWNQSLAHVFASA-------GSSNFASIWDLK 196 (416)
T ss_dssp CS-SCCCCEEEECSSCTTEEEEE-------SSSSCEEEEETT
T ss_pred CC-CCCeeEEEeCCCCCcEEEEE-------cCCCCEEEEECC
Confidence 11 14567889999855555666 789999999974
No 82
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.69 E-value=1.7e-16 Score=99.02 Aligned_cols=99 Identities=20% Similarity=0.334 Sum_probs=78.2
Q ss_pred CcccccCeeeecCCC--CceeeeeeecccccEEEEEEcCC--CcEEEEEeCCCeEEEEecCCCc--eeeeecceeeeecC
Q psy8803 1 KKSWYEEYKRLDYHT--PIVETEVLTQHTHQVLHVSFSHN--GRYFATCSKDGYILVWTSSYPS--KVKYSHDMKTFSWK 74 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~--~~~~~~~~~~~~~~v~~i~~s~~--~~~l~s~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~~ 74 (111)
|+++.||.|++||+. +++.+..+.+|...|.+++|+++ +++|++++.|+.|++||++... .... ... .-.
T Consensus 27 ~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~---~~~-~~~ 102 (379)
T 3jrp_A 27 ATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAV---HAV-HSA 102 (379)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEE---ECC-CSS
T ss_pred EEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeee---ecC-CCc
Confidence 356789999999998 56777888999999999999987 9999999999999999998765 2221 111 124
Q ss_pred ceeeEEEccC--CCEEEEeccccCCccccCceEEEeecC
Q psy8803 75 YTQYSQFNES--DTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 75 ~~~~v~~~~~--~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
++.+++|+|+ +..+ +++ +.|+.|++||++
T Consensus 103 ~v~~~~~~~~~~~~~l-~~~-------~~d~~i~v~d~~ 133 (379)
T 3jrp_A 103 SVNSVQWAPHEYGPLL-LVA-------SSDGKVSVVEFK 133 (379)
T ss_dssp CEEEEEECCGGGCSEE-EEE-------ETTSEEEEEECC
T ss_pred ceEEEEeCCCCCCCEE-EEe-------cCCCcEEEEecC
Confidence 5678889998 6665 444 679999999974
No 83
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.68 E-value=7.3e-16 Score=96.10 Aligned_cols=102 Identities=11% Similarity=0.139 Sum_probs=77.2
Q ss_pred cccccCeeeecCCCCc--eeeeeeecccccEEEEEEcC-------------CCcEEEEEeCCCeEEEEecCCCceee-ee
Q psy8803 2 KSWYEEYKRLDYHTPI--VETEVLTQHTHQVLHVSFSH-------------NGRYFATCSKDGYILVWTSSYPSKVK-YS 65 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~--~~~~~~~~~~~~v~~i~~s~-------------~~~~l~s~~~d~~i~iw~~~~~~~~~-~~ 65 (111)
+++.|+.|++||+..+ .....+.+|...|.+++|+| ++..|++++.|+.|++||++...... ..
T Consensus 120 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 199 (379)
T 3jrp_A 120 VASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE 199 (379)
T ss_dssp EEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEE
T ss_pred EecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeE
Confidence 5678999999999877 34456678999999999999 69999999999999999998654221 11
Q ss_pred cceeeeecCceeeEEEccCC--CEEEEeccccCCccccCceEEEeecC
Q psy8803 66 HDMKTFSWKYTQYSQFNESD--TLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 66 ~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
...... -.++..++|+|++ ..+++++ +.|+.|++||++
T Consensus 200 ~~~~~h-~~~v~~~~~sp~~~~~~~l~s~-------~~dg~i~iwd~~ 239 (379)
T 3jrp_A 200 STLEGH-SDWVRDVAWSPTVLLRSYLASV-------SQDRTCIIWTQD 239 (379)
T ss_dssp EEECCC-SSCEEEEEECCCCSSSEEEEEE-------ETTSCEEEEEES
T ss_pred EEEecc-cCcEeEEEECCCCCCCCeEEEE-------eCCCEEEEEeCC
Confidence 111111 2467788999984 4555666 789999999974
No 84
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.68 E-value=2.5e-15 Score=93.27 Aligned_cols=59 Identities=15% Similarity=0.110 Sum_probs=54.0
Q ss_pred cccccCeeeecCCCC-ceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCc
Q psy8803 2 KSWYEEYKRLDYHTP-IVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPS 60 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~-~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~ 60 (111)
++..||.|++||+.+ .+.+..+..|...|.+++|+|++++|++++.|+.+++||++...
T Consensus 192 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 251 (369)
T 3zwl_B 192 AGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQ 251 (369)
T ss_dssp EEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCc
Confidence 467899999999998 68888889999999999999999999999999999999998754
No 85
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.68 E-value=6.5e-16 Score=99.24 Aligned_cols=96 Identities=16% Similarity=0.202 Sum_probs=77.4
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
+++.|+.|++||+.+++.+..+.+|...|.+++|+|+++.+++++.|+.|++||++++...... ... -.++..++|
T Consensus 285 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~---~~h-~~~v~~~~~ 360 (464)
T 3v7d_B 285 SGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTL---QGH-TALVGLLRL 360 (464)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEE---CCC-SSCEEEEEE
T ss_pred EEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEE---eCC-CCcEEEEEE
Confidence 5678999999999999999999999999999999999999999999999999999987655421 111 134556666
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+ +..+ +++ +.|+.|++||++
T Consensus 361 ~--~~~l-~s~-------s~dg~v~vwd~~ 380 (464)
T 3v7d_B 361 S--DKFL-VSA-------AADGSIRGWDAN 380 (464)
T ss_dssp C--SSEE-EEE-------ETTSEEEEEETT
T ss_pred c--CCEE-EEE-------eCCCcEEEEECC
Confidence 6 3444 555 789999999974
No 86
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.67 E-value=5.7e-16 Score=98.78 Aligned_cols=98 Identities=13% Similarity=0.054 Sum_probs=72.5
Q ss_pred ccCeeeecCCCC-ceeee-------eeecccccEEEEEEcCCC-cEEEEEeCCCeEEEEecCCCceee-eecceeeee--
Q psy8803 5 YEEYKRLDYHTP-IVETE-------VLTQHTHQVLHVSFSHNG-RYFATCSKDGYILVWTSSYPSKVK-YSHDMKTFS-- 72 (111)
Q Consensus 5 ~d~~i~iw~~~~-~~~~~-------~~~~~~~~v~~i~~s~~~-~~l~s~~~d~~i~iw~~~~~~~~~-~~~~~~~~~-- 72 (111)
.|++|++||+.. ++.+. .+.+|...|.+++|+|++ ++|++++.|+.|++||++...... +........
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 275 (447)
T 3dw8_B 196 DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDP 275 (447)
T ss_dssp CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC---
T ss_pred CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCc
Confidence 799999999994 44443 356899999999999998 999999999999999998765311 000011100
Q ss_pred ---------cCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 73 ---------WKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 73 ---------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
..++..++|+|++..+++ + +. +.|++||++
T Consensus 276 ~~~~~~~~~~~~v~~~~~s~~g~~l~~-~-------~~-~~v~iwd~~ 314 (447)
T 3dw8_B 276 SNRSFFSEIISSISDVKFSHSGRYMMT-R-------DY-LSVKVWDLN 314 (447)
T ss_dssp --CCHHHHHTTCEEEEEECTTSSEEEE-E-------ES-SEEEEEETT
T ss_pred cccccccccCceEEEEEECCCCCEEEE-e-------eC-CeEEEEeCC
Confidence 016778999999888765 3 44 899999974
No 87
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.67 E-value=1.7e-15 Score=93.15 Aligned_cols=97 Identities=13% Similarity=0.118 Sum_probs=81.1
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
+++.|+.|++||+.+++.+..+.+|...+.+++|+|+++.|++++.|+.+++||++........ .. -.++..++|
T Consensus 158 ~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~----~~-~~~v~~~~~ 232 (337)
T 1gxr_A 158 SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH----DF-TSQIFSLGY 232 (337)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE----EC-SSCEEEEEE
T ss_pred EEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeee----cC-CCceEEEEE
Confidence 4678999999999999999999999999999999999999999999999999999987655421 11 145677889
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|++..+++ + +.++.|++||++
T Consensus 233 s~~~~~l~~-~-------~~~~~i~~~~~~ 254 (337)
T 1gxr_A 233 CPTGEWLAV-G-------MESSNVEVLHVN 254 (337)
T ss_dssp CTTSSEEEE-E-------ETTSCEEEEETT
T ss_pred CCCCCEEEE-E-------cCCCcEEEEECC
Confidence 999888755 4 568899999974
No 88
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.67 E-value=5.5e-16 Score=96.66 Aligned_cols=100 Identities=16% Similarity=0.167 Sum_probs=79.4
Q ss_pred cccccCeeeecCCCCce--eeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 2 KSWYEEYKRLDYHTPIV--ETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
+++.|+.|++||+..++ .+..+.+|...|.+++|+|++++|++++.|+.+++||++........ ..... -..+..+
T Consensus 25 ~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~~~~-~~~v~~~ 102 (372)
T 1k8k_C 25 ICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTL-VILRI-NRAARCV 102 (372)
T ss_dssp EECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEE-ECCCC-SSCEEEE
T ss_pred EEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeE-EeecC-CCceeEE
Confidence 56689999999999886 88888999999999999999999999999999999999876533211 01111 1456788
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|+|++..+++ + +.++.|++||++
T Consensus 103 ~~~~~~~~l~~-~-------~~d~~v~i~d~~ 126 (372)
T 1k8k_C 103 RWAPNEKKFAV-G-------SGSRVISICYFE 126 (372)
T ss_dssp EECTTSSEEEE-E-------ETTSSEEEEEEE
T ss_pred EECCCCCEEEE-E-------eCCCEEEEEEec
Confidence 89998877655 4 678999999963
No 89
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.67 E-value=7.9e-16 Score=104.32 Aligned_cols=101 Identities=14% Similarity=0.085 Sum_probs=80.8
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++.||.|++||+.+++.+..+.+|.+.|.+++|+|+++.|++++.|+.+++|+++....... .....-.++.+++
T Consensus 71 ~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~---~~~~~~~~v~~~~ 147 (814)
T 3mkq_A 71 IVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQ---TFEGHEHFVMCVA 147 (814)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEE---EEECCSSCEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEE---EEcCCCCcEEEEE
Confidence 3567899999999999999999999999999999999999999999999999999987533221 1111124567888
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|.+..+++++ +.|+.|++||++
T Consensus 148 ~~p~~~~~l~~~-------~~dg~v~vwd~~ 171 (814)
T 3mkq_A 148 FNPKDPSTFASG-------CLDRTVKVWSLG 171 (814)
T ss_dssp EETTEEEEEEEE-------ETTSEEEEEETT
T ss_pred EEcCCCCEEEEE-------eCCCeEEEEECC
Confidence 999555555666 789999999973
No 90
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.67 E-value=2.9e-16 Score=101.14 Aligned_cols=98 Identities=15% Similarity=0.119 Sum_probs=75.6
Q ss_pred cccccCeeeecCCCCc--------e---eeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCceeeeeccee
Q psy8803 2 KSWYEEYKRLDYHTPI--------V---ETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKVKYSHDMK 69 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~--------~---~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~ 69 (111)
+++.|++|++||+.+. + .+..+.+|...|.+++|+|+ +++|++++.|+++++||++........ .
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~---~ 189 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCAT---L 189 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEE---E
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeec---c
Confidence 5778999999998654 1 24556679999999999998 899999999999999999986443211 1
Q ss_pred eeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 70 TFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 70 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.. -..+++++|+|++..++ +| +.|+.|++||++
T Consensus 190 ~~-~~~v~~v~wspdg~~la-sg-------s~dg~v~iwd~~ 222 (434)
T 2oit_A 190 PS-TVAVTSVCWSPKGKQLA-VG-------KQNGTVVQYLPT 222 (434)
T ss_dssp CG-GGCEEEEEECTTSSCEE-EE-------ETTSCEEEECTT
T ss_pred CC-CCceeEEEEcCCCCEEE-EE-------cCCCcEEEEccC
Confidence 11 13567888999987764 45 689999999975
No 91
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.67 E-value=4.2e-16 Score=98.37 Aligned_cols=99 Identities=13% Similarity=0.058 Sum_probs=80.3
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCc--------------------e
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPS--------------------K 61 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~--------------------~ 61 (111)
+++.|+.|++||+.+++.+..+..|...+.+++|+|++++|++++.|+.|++||++... .
T Consensus 305 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (425)
T 1r5m_A 305 SCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPL 384 (425)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCE
T ss_pred EEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchh
Confidence 56789999999999999999999999999999999999999999999999999997644 2
Q ss_pred eeeecceeeeecC-ceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 62 VKYSHDMKTFSWK-YTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 62 ~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.. ......-. +++.++|+|++..+++ + +.|+.|++||++
T Consensus 385 ~~---~~~~~~~~~~v~~~~~s~~~~~l~~-~-------~~dg~i~iw~~~ 424 (425)
T 1r5m_A 385 YA---SYQSSQDNDYIFDLSWNCAGNKISV-A-------YSLQEGSVVAIP 424 (425)
T ss_dssp EE---EECCTTCCCCEEEEEECTTSSEEEE-E-------ESSSCCEEEECC
T ss_pred hh---hhcCcccCCceEEEEccCCCceEEE-E-------ecCceEEEEeec
Confidence 21 11111101 6788999999987654 4 679999999985
No 92
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.66 E-value=2.6e-15 Score=92.31 Aligned_cols=98 Identities=14% Similarity=0.151 Sum_probs=78.6
Q ss_pred cccccCeeeecCCCCce--eeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 2 KSWYEEYKRLDYHTPIV--ETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
+++.|+.|++||+..++ ....+..|...+.+++|+|+++.+++++.|+.+++||++........ .. .-.++..+
T Consensus 114 ~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~---~~-~~~~i~~~ 189 (337)
T 1gxr_A 114 VGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF---QG-HTDGASCI 189 (337)
T ss_dssp EEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE---CC-CSSCEEEE
T ss_pred EEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeee---ec-ccCceEEE
Confidence 46789999999999876 56677889999999999999999999999999999999987655421 11 12456788
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|+|++..+++ + +.++.|++||++
T Consensus 190 ~~~~~~~~l~~-~-------~~dg~i~~~d~~ 213 (337)
T 1gxr_A 190 DISNDGTKLWT-G-------GLDNTVRSWDLR 213 (337)
T ss_dssp EECTTSSEEEE-E-------ETTSEEEEEETT
T ss_pred EECCCCCEEEE-E-------ecCCcEEEEECC
Confidence 89998877654 4 679999999974
No 93
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.66 E-value=3e-16 Score=100.15 Aligned_cols=102 Identities=12% Similarity=0.074 Sum_probs=77.4
Q ss_pred CcccccCeeeecCCCCceeeeeee-cccccEEEEEEc----CCCcEEEEEeCCCeEEEEecCCCceee----eecceeee
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLT-QHTHQVLHVSFS----HNGRYFATCSKDGYILVWTSSYPSKVK----YSHDMKTF 71 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~i~~s----~~~~~l~s~~~d~~i~iw~~~~~~~~~----~~~~~~~~ 71 (111)
++++.||+|++||++.++++..+. +|...|.+++|+ +++.+|++++.|+.|++||++.+.... +...+...
T Consensus 230 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 309 (437)
T 3gre_A 230 ILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSME 309 (437)
T ss_dssp EEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGG
T ss_pred EEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccc
Confidence 357889999999999999888886 788899999665 467899999999999999998765443 22222211
Q ss_pred ec------------------CceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 72 SW------------------KYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 72 ~~------------------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.+ .++.+++|+ ++ .+++++ +.|+.|++||++
T Consensus 310 ~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~-~~l~s~-------~~d~~i~~wd~~ 358 (437)
T 3gre_A 310 HFLPIEKGLEELNFCGIRSLNALSTISVS-ND-KILLTD-------EATSSIVMFSLN 358 (437)
T ss_dssp GGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT-EEEEEE-------GGGTEEEEEETT
T ss_pred eecccccccccceecccccCCceEEEEEC-Cc-eEEEec-------CCCCeEEEEECC
Confidence 11 236778898 55 555666 789999999974
No 94
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.66 E-value=3e-16 Score=100.08 Aligned_cols=101 Identities=14% Similarity=0.185 Sum_probs=73.6
Q ss_pred cccccCeeeecCCCCceee---------------------------------------ee-eecccccEEEEEEcCCCcE
Q psy8803 2 KSWYEEYKRLDYHTPIVET---------------------------------------EV-LTQHTHQVLHVSFSHNGRY 41 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~---------------------------------------~~-~~~~~~~v~~i~~s~~~~~ 41 (111)
+++.|++|++||+..+... .. +.+|...|.+++|+|++++
T Consensus 112 s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 191 (447)
T 3dw8_B 112 LSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYET 191 (447)
T ss_dssp EEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSE
T ss_pred EeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCE
Confidence 5788999999999764432 12 3579999999999999999
Q ss_pred EEEEeCCCeEEEEecCCC-ceeee----ecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 42 FATCSKDGYILVWTSSYP-SKVKY----SHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 42 l~s~~~d~~i~iw~~~~~-~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+++ .|+.|++||++.. ..... ....... -..+.+++|+|++..+++++ +.|+.|++||++
T Consensus 192 l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~s~-------~~dg~i~iwd~~ 257 (447)
T 3dw8_B 192 YLSA-DDLRINLWHLEITDRSFNIVDIKPANMEEL-TEVITAAEFHPNSCNTFVYS-------SSKGTIRLCDMR 257 (447)
T ss_dssp EEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGC-CCCEEEEEECSSCTTEEEEE-------ETTSCEEEEETT
T ss_pred EEEe-CCCeEEEEECCCCCceeeeeeccccccccc-CcceEEEEECCCCCcEEEEE-------eCCCeEEEEECc
Confidence 9998 7999999999842 22220 0011111 14577889999884445666 789999999975
No 95
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.66 E-value=2.2e-15 Score=94.70 Aligned_cols=98 Identities=16% Similarity=0.108 Sum_probs=74.5
Q ss_pred CcccccCeeeecCCCCceeeeeeec---ccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCcee
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQ---HTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQ 77 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~---~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 77 (111)
++++.|+.|++||+.. ..+..+.. |...|.+++|+|+++.|++++.|+.+++||++...... .... -..+.
T Consensus 135 ~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~----~~~h-~~~v~ 208 (383)
T 3ei3_B 135 FVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFK----EKLH-KAKVT 208 (383)
T ss_dssp EEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEE----EECS-SSCEE
T ss_pred EEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEE----eccC-CCcEE
Confidence 3567899999999995 44555544 44789999999999999999999999999995432221 1111 14567
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+++|+|++..+++++ +.|+.|++||++
T Consensus 209 ~~~~~~~~~~~l~s~-------~~d~~i~iwd~~ 235 (383)
T 3ei3_B 209 HAEFNPRCDWLMATS-------SVDATVKLWDLR 235 (383)
T ss_dssp EEEECSSCTTEEEEE-------ETTSEEEEEEGG
T ss_pred EEEECCCCCCEEEEE-------eCCCEEEEEeCC
Confidence 888999988455666 789999999974
No 96
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.66 E-value=1.8e-15 Score=96.56 Aligned_cols=93 Identities=17% Similarity=0.242 Sum_probs=69.6
Q ss_pred ccCeeeecCCCCceeeeeee--cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEc
Q psy8803 5 YEEYKRLDYHTPIVETEVLT--QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFN 82 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~--~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 82 (111)
-|++|+|||..+++....+. +|...|.+++|+|++++|++|+.|+.|++||+++.+..... .... ..+.++++
T Consensus 123 ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~---~~h~-~~v~~~s~- 197 (420)
T 4gga_A 123 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM---TSHS-ARVGSLSW- 197 (420)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE---CCCS-SCEEEEEE-
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEE---eCCC-CceEEEee-
Confidence 48999999999998766554 67788999999999999999999999999999987665411 1110 22223333
Q ss_pred cCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 83 ESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
++. ++++| +.++.+++||.+
T Consensus 198 -~~~-~l~sg-------s~d~~i~~~d~~ 217 (420)
T 4gga_A 198 -NSY-ILSSG-------SRSGHIHHHDVR 217 (420)
T ss_dssp -ETT-EEEEE-------ETTSEEEEEETT
T ss_pred -CCC-EEEEE-------eCCCceeEeeec
Confidence 333 45666 789999999864
No 97
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.65 E-value=2.4e-15 Score=92.77 Aligned_cols=99 Identities=19% Similarity=0.207 Sum_probs=76.6
Q ss_pred CcccccCeeeecCCCCc-----eeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCc
Q psy8803 1 KKSWYEEYKRLDYHTPI-----VETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKY 75 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~-----~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~ 75 (111)
++++.|++|+|||+.+. .+...+.+|...|.+++|+|++++|++++.|+.+++|+............ ....
T Consensus 55 ~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~----~~~~ 130 (340)
T 4aow_A 55 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVG----HTKD 130 (340)
T ss_dssp EEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC----CSSC
T ss_pred EEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecC----CCCc
Confidence 46789999999998754 45677889999999999999999999999999999999987655432111 1133
Q ss_pred eeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 76 TQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.....+++.+..+ +++ +.|+.+++||++
T Consensus 131 ~~~~~~~~~~~~l-~s~-------s~d~~~~~~d~~ 158 (340)
T 4aow_A 131 VLSVAFSSDNRQI-VSG-------SRDKTIKLWNTL 158 (340)
T ss_dssp EEEEEECTTSSCE-EEE-------ETTSCEEEECTT
T ss_pred eeEEEEeecCccc-eee-------cCCCeEEEEEeC
Confidence 4456677777766 455 789999999863
No 98
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.65 E-value=1.3e-15 Score=94.53 Aligned_cols=98 Identities=13% Similarity=0.098 Sum_probs=75.5
Q ss_pred cccccCeeeecCCCCceeeeeeec-----ccccEEEEEEcCC----CcEEEEEeCCCeEEEEecCCCceeeeecceeeee
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQ-----HTHQVLHVSFSHN----GRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFS 72 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~-----~~~~v~~i~~s~~----~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~ 72 (111)
++..++.|++||+.+++.+..+.. |...|.+++|+|+ +++|++++.|+.|++||+.+...... ....
T Consensus 39 ~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~---~~~~- 114 (366)
T 3k26_A 39 ATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKH---YVGH- 114 (366)
T ss_dssp EEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEE---EESC-
T ss_pred EECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeee---ecCC-
Confidence 345678999999998876666654 4578999999998 67999999999999999988765542 1111
Q ss_pred cCceeeEEEcc-CCCEEEEeccccCCccccCceEEEeecC
Q psy8803 73 WKYTQYSQFNE-SDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 73 ~~~~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
-.++..++|+| ++..+ +++ +.|+.|++||++
T Consensus 115 ~~~i~~~~~~~~~~~~l-~s~-------~~dg~i~iwd~~ 146 (366)
T 3k26_A 115 GNAINELKFHPRDPNLL-LSV-------SKDHALRLWNIQ 146 (366)
T ss_dssp CSCEEEEEECSSCTTEE-EEE-------ETTSCEEEEETT
T ss_pred CCcEEEEEECCCCCCEE-EEE-------eCCCeEEEEEee
Confidence 25677889999 55554 555 779999999974
No 99
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.65 E-value=8.4e-16 Score=101.49 Aligned_cols=97 Identities=7% Similarity=-0.032 Sum_probs=71.1
Q ss_pred CcccccCeeeecCCCCceeeeeeecccc-----cEEEEEEcCCCcEEEEEeCCCeEEEEecCCCce-------eee-ecc
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTH-----QVLHVSFSHNGRYFATCSKDGYILVWTSSYPSK-------VKY-SHD 67 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~-----~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~-------~~~-~~~ 67 (111)
|+++.||.|++||... .+..+. |.. .+.+++|||||++|++|+.|++|++||+..+.. ... ...
T Consensus 101 As~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~ 177 (588)
T 2j04_A 101 AVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLS 177 (588)
T ss_dssp EEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECS
T ss_pred EEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecc
Confidence 5678999999999543 555566 665 599999999999999999999999999987642 111 000
Q ss_pred eeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 68 MKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 68 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
...+ -..+.+++|+|++ + +++ +.|+.|++||+.
T Consensus 178 ~~gh-~~~V~sVawSPdg--L-aas-------s~D~tVrlWd~~ 210 (588)
T 2j04_A 178 DAGS-KDWVTHIVWYEDV--L-VAA-------LSNNSVFSMTVS 210 (588)
T ss_dssp CTTC-CCCEEEEEEETTE--E-EEE-------ETTCCEEEECCC
T ss_pred cccc-cccEEEEEEcCCc--E-EEE-------eCCCeEEEEECC
Confidence 0111 1457788999987 4 344 679999999973
No 100
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.65 E-value=3.5e-15 Score=91.31 Aligned_cols=97 Identities=9% Similarity=0.059 Sum_probs=75.0
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEe--CCCeEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCS--KDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
+++.+++|++||........... +...+..+.|+|++..+++++ .|+.|++||+++.+.... ...+ -.+++++
T Consensus 216 ~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~---l~gH-~~~V~~l 290 (318)
T 4ggc_A 216 GGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAE---LKGH-TSRVLSL 290 (318)
T ss_dssp ECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEE---ECCC-SSCEEEE
T ss_pred ecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEE---EcCC-CCCEEEE
Confidence 45678999999999877665544 777899999999988776654 799999999998776652 2222 2567788
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|+|++..+ +++ +.|++|+|||+.
T Consensus 291 ~~spdg~~l-~S~-------s~D~~v~iWd~~ 314 (318)
T 4ggc_A 291 TMSPDGATV-ASA-------AADETLRLWRCF 314 (318)
T ss_dssp EECTTSSCE-EEE-------ETTTEEEEECCS
T ss_pred EEcCCCCEE-EEE-------ecCCeEEEEECC
Confidence 899988876 555 789999999973
No 101
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.65 E-value=1.6e-15 Score=94.59 Aligned_cols=97 Identities=14% Similarity=-0.028 Sum_probs=77.7
Q ss_pred cccccCeeeecCCC------------------CceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee
Q psy8803 2 KSWYEEYKRLDYHT------------------PIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 2 ~~~~d~~i~iw~~~------------------~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~ 63 (111)
+++.|+.+++||+. .++.+..+.+|...|.+++|+|++++|++++.|+.+++||++......
T Consensus 159 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 238 (372)
T 1k8k_C 159 AGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA 238 (372)
T ss_dssp EEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEE
T ss_pred EEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeE
Confidence 56789999999953 567888888999999999999999999999999999999998876554
Q ss_pred eecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 64 YSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 64 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
. ... .-.++..++|+|++..+++ +.++.|++|+++
T Consensus 239 ~---~~~-~~~~v~~~~~~~~~~~l~~---------~~d~~i~i~~~~ 273 (372)
T 1k8k_C 239 T---LAS-ETLPLLAVTFITESSLVAA---------GHDCFPVLFTYD 273 (372)
T ss_dssp E---EEC-SSCCEEEEEEEETTEEEEE---------ETTSSCEEEEEE
T ss_pred E---Ecc-CCCCeEEEEEecCCCEEEE---------EeCCeEEEEEcc
Confidence 2 111 1245678899998876554 458889999973
No 102
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.64 E-value=2.6e-15 Score=94.19 Aligned_cols=102 Identities=14% Similarity=0.088 Sum_probs=76.7
Q ss_pred CcccccCe-eeecCCCCceeeeeee-c-ccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee--eecc-----eee
Q psy8803 1 KKSWYEEY-KRLDYHTPIVETEVLT-Q-HTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK--YSHD-----MKT 70 (111)
Q Consensus 1 ~~~~~d~~-i~iw~~~~~~~~~~~~-~-~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~--~~~~-----~~~ 70 (111)
|+++.|++ |++||+.+++.+..+. + |...|.+++|+|++++|++++.|+++++||++...... .... ...
T Consensus 211 ~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 290 (355)
T 3vu4_A 211 ATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQ 290 (355)
T ss_dssp EEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCC
T ss_pred EEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccc
Confidence 46789998 9999999999999998 5 99999999999999999999999999999997542111 0000 000
Q ss_pred eec------------CceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 71 FSW------------KYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 71 ~~~------------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
..| .+...++|++++..+++ + +.|+.+++|++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~-~-------~~dg~~~~~~~ 334 (355)
T 3vu4_A 291 SEWSLCNFKLSVDKHVRGCKIAWISESSLVVV-W-------PHTRMIETFKV 334 (355)
T ss_dssp CSSCSEEEECCCCTTCCCCEEEESSSSEEEEE-E-------TTTTEEEEEEE
T ss_pred cccceeEEEeccCCCCCceEEEEeCCCCEEEE-E-------eCCCeEEEEEE
Confidence 001 11246789998877655 3 56899999986
No 103
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.64 E-value=2.1e-15 Score=94.80 Aligned_cols=102 Identities=18% Similarity=0.122 Sum_probs=79.0
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCc-EEEEEeCCCeEEEEecCCCce-eeee-----------cce
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGR-YFATCSKDGYILVWTSSYPSK-VKYS-----------HDM 68 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~-~l~s~~~d~~i~iw~~~~~~~-~~~~-----------~~~ 68 (111)
++..|+.|++||+.+++.+..+.+|...|.+++|+|++. ++++++.|+.+++||++.... .... ...
T Consensus 161 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (408)
T 4a11_B 161 VGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESA 240 (408)
T ss_dssp EEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTS
T ss_pred EEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccc
Confidence 467899999999999998999999999999999999987 699999999999999976431 1100 000
Q ss_pred eeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 69 KTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 69 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
....-.++..++|+|++..+++ + +.|+.|++||++
T Consensus 241 ~~~~~~~v~~~~~~~~~~~l~~-~-------~~dg~i~vwd~~ 275 (408)
T 4a11_B 241 NTAHNGKVNGLCFTSDGLHLLT-V-------GTDNRMRLWNSS 275 (408)
T ss_dssp SCSCSSCEEEEEECTTSSEEEE-E-------ETTSCEEEEETT
T ss_pred cccccCceeEEEEcCCCCEEEE-e-------cCCCeEEEEECC
Confidence 0111245778899999888755 4 678999999974
No 104
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.64 E-value=1.1e-15 Score=103.93 Aligned_cols=101 Identities=20% Similarity=0.299 Sum_probs=78.8
Q ss_pred CcccccCeeeecCCC--CceeeeeeecccccEEEEEEcCC--CcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCce
Q psy8803 1 KKSWYEEYKRLDYHT--PIVETEVLTQHTHQVLHVSFSHN--GRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYT 76 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~--~~~~~~~~~~~~~~v~~i~~s~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 76 (111)
++++.||+|++||+. +++.+..+.+|.+.|.+++|+|+ ++.|++++.|+.|++||+..+...... ..... -.++
T Consensus 25 atg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~-~~~~h-~~~V 102 (753)
T 3jro_A 25 ATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIA-VHAVH-SASV 102 (753)
T ss_dssp EEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEE-EECCC-SSCE
T ss_pred EEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccc-cccCC-CCCe
Confidence 367789999999998 55778888999999999999988 999999999999999999876421100 01111 2467
Q ss_pred eeEEEccC--CCEEEEeccccCCccccCceEEEeecC
Q psy8803 77 QYSQFNES--DTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 77 ~~v~~~~~--~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.+++|+|+ +..+ +++ +.|+.|++||++
T Consensus 103 ~~v~~sp~~~~~~l-~sg-------s~dg~I~vwdl~ 131 (753)
T 3jro_A 103 NSVQWAPHEYGPLL-LVA-------SSDGKVSVVEFK 131 (753)
T ss_dssp EEEEECCGGGCSEE-EEE-------ETTSEEEEEECC
T ss_pred EEEEECCCCCCCEE-EEE-------eCCCcEEEEEee
Confidence 78889998 6665 555 789999999974
No 105
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.64 E-value=3.2e-15 Score=96.11 Aligned_cols=102 Identities=5% Similarity=-0.050 Sum_probs=77.6
Q ss_pred CcccccCeeeecCCC--Cceeeeeee--cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee-eecceeeeecCc
Q psy8803 1 KKSWYEEYKRLDYHT--PIVETEVLT--QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK-YSHDMKTFSWKY 75 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~--~~~~~~~~~--~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~-~~~~~~~~~~~~ 75 (111)
++++.|++|++||+. .++.+..+. .|...|.+++|+|+++.|++++.++.+.+|++....... ........ -.+
T Consensus 119 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h-~~~ 197 (450)
T 2vdu_B 119 ACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGH-VSM 197 (450)
T ss_dssp EEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEEC-SSC
T ss_pred EEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecc-cCc
Confidence 356789999999999 787777776 567899999999999999999999999999997654321 10011111 245
Q ss_pred eeeEEEccC---CCEEEEeccccCCccccCceEEEeecC
Q psy8803 76 TQYSQFNES---DTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 76 ~~~v~~~~~---~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+++++|+|+ +.. ++++ +.|+.|++||++
T Consensus 198 v~~~~~sp~~~~~~~-l~s~-------~~d~~i~vwd~~ 228 (450)
T 2vdu_B 198 LTDVHLIKDSDGHQF-IITS-------DRDEHIKISHYP 228 (450)
T ss_dssp EEEEEEEECTTSCEE-EEEE-------ETTSCEEEEEES
T ss_pred eEEEEEcCCCCCCcE-EEEE-------cCCCcEEEEECC
Confidence 678889998 545 4666 789999999974
No 106
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.64 E-value=3.5e-15 Score=94.15 Aligned_cols=97 Identities=12% Similarity=0.173 Sum_probs=79.9
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
+++.|+.|++||+..++.+..+.+|...|.++.|+|++ .+++++.|+.+++||++....... .. ..-.++..++|
T Consensus 264 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~---~~-~~~~~i~~~~~ 338 (425)
T 1r5m_A 264 SASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLAL---SI-VDGVPIFAGRI 338 (425)
T ss_dssp EEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEE---EE-CTTCCEEEEEE
T ss_pred EEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEe---cc-cCCccEEEEEE
Confidence 56789999999999999888999999999999999999 999999999999999988765542 11 11145678899
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|++..+++ + +.++.|++||++
T Consensus 339 s~~~~~l~~-~-------~~dg~i~i~~~~ 360 (425)
T 1r5m_A 339 SQDGQKYAV-A-------FMDGQVNVYDLK 360 (425)
T ss_dssp CTTSSEEEE-E-------ETTSCEEEEECH
T ss_pred cCCCCEEEE-E-------ECCCeEEEEECC
Confidence 999887654 4 678999999973
No 107
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.63 E-value=4.6e-15 Score=95.41 Aligned_cols=102 Identities=11% Similarity=0.041 Sum_probs=79.7
Q ss_pred CcccccCeeeecCCCCceeeee-eecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeec---ceee------
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEV-LTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSH---DMKT------ 70 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~-~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~---~~~~------ 70 (111)
++++.|++|++||+.+++.+.. +.+|...|.+++|+ ++++|++++.|+.|++||++++....... .+..
T Consensus 214 ~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (450)
T 2vdu_B 214 ITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQH 292 (450)
T ss_dssp EEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTS
T ss_pred EEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcc
Confidence 3567899999999998887776 56899999999999 99999999999999999999876543110 0000
Q ss_pred ------------eecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 71 ------------FSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 71 ------------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
..-..+..++|+|++..+++++ ..++.|++|++
T Consensus 293 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-------~~d~~i~iw~~ 337 (450)
T 2vdu_B 293 LAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV-------EATKCIIILEM 337 (450)
T ss_dssp BC----------CBCCCEEEEEECSSSSEEEEEE-------TTCSEEEEEEE
T ss_pred cccccccccccccceEEEEEEEEeCCCCEEEEEE-------CCCCeEEEEEe
Confidence 0012456789999998887765 57899999997
No 108
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.63 E-value=6.2e-15 Score=93.51 Aligned_cols=100 Identities=11% Similarity=0.098 Sum_probs=80.4
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCC-cEEEEEe--CCCeEEEEecCCCceeeeecceeeeecCcee
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNG-RYFATCS--KDGYILVWTSSYPSKVKYSHDMKTFSWKYTQ 77 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~-~~l~s~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 77 (111)
++++.|+.|++||+.+++.+..+.+|...|.+++|+|++ .++++++ .|+.+++||+++....... . . -..+.
T Consensus 233 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~---~-~-~~~v~ 307 (401)
T 4aez_A 233 ASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTV---D-A-GSQVT 307 (401)
T ss_dssp EEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEE---E-C-SSCEE
T ss_pred EEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEE---e-C-CCcEE
Confidence 356789999999999999998999999999999999975 5677765 7999999999987665421 1 1 14577
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.++|+|++..+++++ +..++.|++||++
T Consensus 308 ~~~~s~~~~~l~~~~------g~~dg~i~v~~~~ 335 (401)
T 4aez_A 308 SLIWSPHSKEIMSTH------GFPDNNLSIWSYS 335 (401)
T ss_dssp EEEECSSSSEEEEEE------CTTTCEEEEEEEE
T ss_pred EEEECCCCCeEEEEe------ecCCCcEEEEecC
Confidence 889999999887763 1579999999963
No 109
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.62 E-value=2.9e-15 Score=92.86 Aligned_cols=103 Identities=14% Similarity=0.196 Sum_probs=73.8
Q ss_pred CcccccCeeeecCCCCce-eeeeeecccccEEEEE------EcCCCcEEEEEeCCCeEEEEecCCCc-eeeeecceeeee
Q psy8803 1 KKSWYEEYKRLDYHTPIV-ETEVLTQHTHQVLHVS------FSHNGRYFATCSKDGYILVWTSSYPS-KVKYSHDMKTFS 72 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~-~~~~~~~~~~~v~~i~------~s~~~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~~~~ 72 (111)
++++.|+.|++||+..++ .+..+.+|...|.++. |+|+++.|++++.|+.+++||++... ............
T Consensus 84 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~ 163 (357)
T 3i2n_A 84 ATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGEN 163 (357)
T ss_dssp EEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSC
T ss_pred EEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCC
Confidence 356789999999999887 8888999999999995 57889999999999999999998754 222110000000
Q ss_pred cCceeeEE----EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 73 WKYTQYSQ----FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 73 ~~~~~~v~----~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
-..+..++ |+|++..++ ++ +.++.|++||++
T Consensus 164 ~~~v~~~~~~~~~~~~~~~l~-~~-------~~d~~i~i~d~~ 198 (357)
T 3i2n_A 164 KRDCWTVAFGNAYNQEERVVC-AG-------YDNGDIKLFDLR 198 (357)
T ss_dssp CCCEEEEEEECCCC-CCCEEE-EE-------ETTSEEEEEETT
T ss_pred CCceEEEEEEeccCCCCCEEE-EE-------ccCCeEEEEECc
Confidence 01344455 677777664 44 678999999975
No 110
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.62 E-value=6.5e-15 Score=103.77 Aligned_cols=99 Identities=18% Similarity=0.207 Sum_probs=81.4
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcC--CCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceee
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSH--NGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQY 78 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~--~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (111)
|+++.|++|++||+.+++.+..+.+|...|.++.|+| ++..+++++.|+.+++||++++..... .... -.+++.
T Consensus 673 ~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~---~~~h-~~~v~~ 748 (1249)
T 3sfz_A 673 ATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNT---MFGH-TNSVNH 748 (1249)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEE---ECCC-SSCEEE
T ss_pred EEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhhe---ecCC-CCCEEE
Confidence 4677899999999999999999999999999999999 456899999999999999998765542 1111 145678
Q ss_pred EEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 79 SQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
++|+|++..++ ++ +.|+.|++||++
T Consensus 749 ~~~sp~~~~l~-s~-------s~dg~v~vwd~~ 773 (1249)
T 3sfz_A 749 CRFSPDDELLA-SC-------SADGTLRLWDVR 773 (1249)
T ss_dssp EEECSSTTEEE-EE-------ESSSEEEEEEGG
T ss_pred EEEecCCCEEE-EE-------ECCCeEEEEeCC
Confidence 88999888764 45 689999999973
No 111
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.62 E-value=9.5e-15 Score=96.13 Aligned_cols=101 Identities=15% Similarity=0.089 Sum_probs=80.7
Q ss_pred cccccCeeeecCCCCceeeeeeecccc---cEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCcee
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTH---QVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQ 77 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~---~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 77 (111)
+++.|+.|++||..+++.+..+.+|.. .|.+++|+|+ +++|++++.|+.+++||++..+............-.++.
T Consensus 178 ~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~ 257 (615)
T 1pgu_A 178 TVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIF 257 (615)
T ss_dssp EEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEE
T ss_pred EEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceE
Confidence 567899999999999999999999999 9999999999 999999999999999999887665422000001125677
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.++|+ ++..++ ++ +.|+.|++||++
T Consensus 258 ~~~~~-~~~~l~-~~-------~~d~~i~~wd~~ 282 (615)
T 1pgu_A 258 ALSWL-DSQKFA-TV-------GADATIRVWDVT 282 (615)
T ss_dssp EEEES-SSSEEE-EE-------ETTSEEEEEETT
T ss_pred EEEEc-CCCEEE-EE-------cCCCcEEEEECC
Confidence 88999 776664 44 678999999974
No 112
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.62 E-value=6.9e-15 Score=92.17 Aligned_cols=107 Identities=10% Similarity=0.005 Sum_probs=75.4
Q ss_pred cccCeeeecCCCC-ceeeeeeecccccEEEEEEcC---CCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 4 WYEEYKRLDYHTP-IVETEVLTQHTHQVLHVSFSH---NGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 4 ~~d~~i~iw~~~~-~~~~~~~~~~~~~v~~i~~s~---~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
..|+.|++|++.+ ++.+..+.+|...+..++|++ ++..|++++.|++|+|||+++++.......-. .....+..+
T Consensus 154 g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~-~~v~~v~~v 232 (356)
T 2w18_A 154 LSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDD-SYQASVCHK 232 (356)
T ss_dssp STTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC----CCCEEE
T ss_pred CCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCC-cceeeeEEE
Confidence 3699999999954 788888889999999999999 67999999999999999999987665211000 001234567
Q ss_pred EEccCCCEEEEeccccC----CccccCceEEEeecC
Q psy8803 80 QFNESDTLLLVSGVHFG----TPQSTSGEIAVFSLQ 111 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~----~~~~~~~~i~iw~~~ 111 (111)
+|+|++..+++...+.. ..++.|++|++||.+
T Consensus 233 afSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~ 268 (356)
T 2w18_A 233 AYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK 268 (356)
T ss_dssp EEEETTEEEEEEC------------CCEEEEEEETT
T ss_pred EECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC
Confidence 89998876643221100 112789999999963
No 113
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.61 E-value=9e-15 Score=93.64 Aligned_cols=95 Identities=20% Similarity=0.262 Sum_probs=75.0
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++.||+|++||..+++.+..+.+|.+.|.+++| +++.|++++.|+.|++||++++...... .. ...++.+++
T Consensus 147 ~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~---~~-h~~~v~~l~ 220 (435)
T 1p22_A 147 VSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTL---IH-HCEAVLHLR 220 (435)
T ss_dssp EEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEE---CC-CCSCEEEEE
T ss_pred EEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEE---cC-CCCcEEEEE
Confidence 35788999999999999999999999999999998 7899999999999999999987655421 11 113455566
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|++ .. ++++ +.|+.|++||++
T Consensus 221 ~~~--~~-l~s~-------s~dg~i~vwd~~ 241 (435)
T 1p22_A 221 FNN--GM-MVTC-------SKDRSIAVWDMA 241 (435)
T ss_dssp CCT--TE-EEEE-------ETTSCEEEEECS
T ss_pred EcC--CE-EEEe-------eCCCcEEEEeCC
Confidence 653 34 4566 789999999974
No 114
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.61 E-value=3.9e-15 Score=91.96 Aligned_cols=98 Identities=15% Similarity=0.015 Sum_probs=75.9
Q ss_pred CcccccCeeeecCCCCce---eeeeeecccccEEEEEEcCCCc-EEEEEeCCCeEEEEec-CCCceeeeecceee-eecC
Q psy8803 1 KKSWYEEYKRLDYHTPIV---ETEVLTQHTHQVLHVSFSHNGR-YFATCSKDGYILVWTS-SYPSKVKYSHDMKT-FSWK 74 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~---~~~~~~~~~~~v~~i~~s~~~~-~l~s~~~d~~i~iw~~-~~~~~~~~~~~~~~-~~~~ 74 (111)
++++.|+.|++|++..+. ....+.+|...|.+++|+|+++ .|++++.|+.|++||+ ....... ... ..-.
T Consensus 27 ~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~----~~~~~~~~ 102 (342)
T 1yfq_A 27 LITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQA----LTNNEANL 102 (342)
T ss_dssp EEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEE----CBSCCCCS
T ss_pred EEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEe----ccccCCCC
Confidence 356789999999998765 3455568999999999999999 9999999999999999 7765432 111 0114
Q ss_pred ceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 75 YTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
++..++|+| +..+ +++ +.|+.|++||++
T Consensus 103 ~v~~l~~~~-~~~l-~s~-------~~d~~i~iwd~~ 130 (342)
T 1yfq_A 103 GICRICKYG-DDKL-IAA-------SWDGLIEVIDPR 130 (342)
T ss_dssp CEEEEEEET-TTEE-EEE-------ETTSEEEEECHH
T ss_pred ceEEEEeCC-CCEE-EEE-------cCCCeEEEEccc
Confidence 567888998 6665 455 689999999963
No 115
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.60 E-value=3e-14 Score=89.62 Aligned_cols=97 Identities=8% Similarity=0.037 Sum_probs=78.4
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEE-EEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYF-ATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l-~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
+++.|+.|++||+.+++.+..+..|. .+.+++|+|+++.+ ++++.++.|++||+.+++.... +.. . ..+..++
T Consensus 7 s~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~---~~~-~-~~v~~~~ 80 (391)
T 1l0q_A 7 ANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIAT---VPA-G-SSPQGVA 80 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEE---EEC-S-SSEEEEE
T ss_pred EcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEE---EEC-C-CCccceE
Confidence 56789999999999999888888665 58999999999865 6777899999999988765542 111 1 2567889
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|++..+++++ ..++.|++||++
T Consensus 81 ~spdg~~l~~~~-------~~~~~v~v~d~~ 104 (391)
T 1l0q_A 81 VSPDGKQVYVTN-------MASSTLSVIDTT 104 (391)
T ss_dssp ECTTSSEEEEEE-------TTTTEEEEEETT
T ss_pred ECCCCCEEEEEE-------CCCCEEEEEECC
Confidence 999999988877 778999999974
No 116
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.59 E-value=8.3e-15 Score=89.35 Aligned_cols=98 Identities=14% Similarity=-0.022 Sum_probs=73.5
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++.||.|++||+.+++....+..|...|.+++|+|+++.|++++.|+.+++|++............... -.++..++
T Consensus 33 ~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~-~~~i~~~~ 111 (313)
T 3odt_A 33 ASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGH-QGNVCSLS 111 (313)
T ss_dssp EEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCC-SSCEEEEE
T ss_pred EEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhc-ccCEEEEE
Confidence 46788999999999999888888999999999999999999999999999999998764211100011111 13455666
Q ss_pred EccCCCEEEEeccccCCccccCceEEEee
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
| ++..+ +++ +.++.|++||
T Consensus 112 ~--~~~~l-~~~-------~~d~~i~~~d 130 (313)
T 3odt_A 112 F--QDGVV-ISG-------SWDKTAKVWK 130 (313)
T ss_dssp E--ETTEE-EEE-------ETTSEEEEEE
T ss_pred e--cCCEE-EEE-------eCCCCEEEEc
Confidence 6 34454 555 7899999998
No 117
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.59 E-value=1.2e-14 Score=98.81 Aligned_cols=102 Identities=11% Similarity=0.139 Sum_probs=77.1
Q ss_pred cccccCeeeecCCCCc--eeeeeeecccccEEEEEEcC-------------CCcEEEEEeCCCeEEEEecCCCceee-ee
Q psy8803 2 KSWYEEYKRLDYHTPI--VETEVLTQHTHQVLHVSFSH-------------NGRYFATCSKDGYILVWTSSYPSKVK-YS 65 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~--~~~~~~~~~~~~v~~i~~s~-------------~~~~l~s~~~d~~i~iw~~~~~~~~~-~~ 65 (111)
+++.||+|++||+..+ .....+.+|...|.++.|+| ++..+++++.|+.|++||++...... ..
T Consensus 118 sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~ 197 (753)
T 3jro_A 118 VASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE 197 (753)
T ss_dssp EEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEE
T ss_pred EEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceee
Confidence 5678999999999876 34556678999999999999 58999999999999999998753221 10
Q ss_pred cceeeeecCceeeEEEccCC--CEEEEeccccCCccccCceEEEeecC
Q psy8803 66 HDMKTFSWKYTQYSQFNESD--TLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 66 ~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
...... -.++.+++|+|++ ..+++++ +.|+.|++||++
T Consensus 198 ~~~~~h-~~~V~~l~~sp~~~~~~~l~s~-------s~Dg~I~iwd~~ 237 (753)
T 3jro_A 198 STLEGH-SDWVRDVAWSPTVLLRSYLASV-------SQDRTCIIWTQD 237 (753)
T ss_dssp EEECCC-SSCEEEEEECCCCSSSEEEEEE-------ESSSCEEEEEES
T ss_pred eeecCC-CCcEEEEEeccCCCCCCEEEEE-------ecCCEEEEecCC
Confidence 111111 2467788999984 4555666 789999999974
No 118
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.58 E-value=3.3e-14 Score=91.63 Aligned_cols=109 Identities=15% Similarity=0.066 Sum_probs=74.5
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeee---cCcee
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFS---WKYTQ 77 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~---~~~~~ 77 (111)
|+++.||+|++||++++..+....+|...|.+++|+|++++|++++.|+.|++||++. ............. ...+.
T Consensus 166 as~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~v~ 244 (434)
T 2oit_A 166 AVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTL-QEKKVIPCPPFYESDHPVRVL 244 (434)
T ss_dssp EEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTC-CEEEEECCCTTCCTTSCEEEE
T ss_pred EEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCC-cccccccCCcccCCCCceeEE
Confidence 3578899999999998877767778999999999999999999999999999999983 2222100000000 01456
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.++|+++...+++.....+.. .....+++|+++
T Consensus 245 ~v~w~~~~~~l~~~~~~dg~~-~~~~~v~i~~l~ 277 (434)
T 2oit_A 245 DVLWIGTYVFAIVYAAADGTL-ETSPDVVMALLP 277 (434)
T ss_dssp EEEEEETTEEEEEEEETTCCS-SSCCEEEEEECC
T ss_pred EEEEecCceEEEEEccCCCcc-CCCCceEEEEec
Confidence 778888776665544221111 112348899874
No 119
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.57 E-value=3.6e-14 Score=89.22 Aligned_cols=98 Identities=8% Similarity=0.092 Sum_probs=78.4
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCC---CcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceee
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHN---GRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQY 78 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (111)
+++.|+.|++||+.+++....+. +...+.++.|++. +.++++++.++.+++||++....... .... -.++.+
T Consensus 117 s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~---~~~~-~~~v~~ 191 (408)
T 4a11_B 117 SSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHI---LQGH-RQEILA 191 (408)
T ss_dssp EEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEE---ECCC-CSCEEE
T ss_pred EEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeee---ecCC-CCcEEE
Confidence 56789999999999998887776 7788999999984 45999999999999999987654432 1111 145678
Q ss_pred EEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 79 SQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
++|+|++..+++++ +.|+.|++||++
T Consensus 192 ~~~~~~~~~ll~~~-------~~dg~i~i~d~~ 217 (408)
T 4a11_B 192 VSWSPRYDYILATA-------SADSRVKLWDVR 217 (408)
T ss_dssp EEECSSCTTEEEEE-------ETTSCEEEEETT
T ss_pred EEECCCCCcEEEEE-------cCCCcEEEEECC
Confidence 88999988766777 789999999974
No 120
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.56 E-value=2.3e-14 Score=94.78 Aligned_cols=98 Identities=10% Similarity=0.032 Sum_probs=69.8
Q ss_pred CcccccCeeeecCCCCce-------eeeee----ecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeeccee
Q psy8803 1 KKSWYEEYKRLDYHTPIV-------ETEVL----TQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMK 69 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~-------~~~~~----~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~ 69 (111)
|+++.||+|+|||+..++ .+..+ .+|...|.+++|+||| +++++.|+.+++|++.............
T Consensus 145 Asgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~ 222 (588)
T 2j04_A 145 VVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQ 222 (588)
T ss_dssp EEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEE
T ss_pred EEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeec
Confidence 467889999999999874 25665 5788899999999999 8888899999999998755310000111
Q ss_pred eeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 70 TFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 70 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
...-..+..++|+ +..++++ + +++|++||++
T Consensus 223 ~~h~~~V~svaFs--g~~LASa--------~-~~tIkLWd~~ 253 (588)
T 2j04_A 223 NASRRKITDLKIV--DYKVVLT--------C-PGYVHKIDLK 253 (588)
T ss_dssp CCCSSCCCCEEEE--TTEEEEE--------C-SSEEEEEETT
T ss_pred ccccCcEEEEEEE--CCEEEEE--------e-CCeEEEEECC
Confidence 1111346678888 4666553 3 5899999964
No 121
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.56 E-value=4.4e-14 Score=90.55 Aligned_cols=95 Identities=14% Similarity=0.144 Sum_probs=71.3
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++.||+|++||+.+++.+..+.+|.+.|.++.|+ ++.+++++.|+.|++||+.++..... .... -.++.+++
T Consensus 133 ~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~---~~~h-~~~v~~~~ 206 (445)
T 2ovr_B 133 VSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHT---LYGH-TSTVRCMH 206 (445)
T ss_dssp EEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEE---ECCC-SSCEEEEE
T ss_pred EEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEE---ECCC-CCcEEEEE
Confidence 367889999999999999999999999999999997 67999999999999999988765441 1111 13344555
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+ +.. ++++ +.|+.|++||++
T Consensus 207 ~~--~~~-l~s~-------s~dg~i~~wd~~ 227 (445)
T 2ovr_B 207 LH--EKR-VVSG-------SRDATLRVWDIE 227 (445)
T ss_dssp EE--TTE-EEEE-------ETTSEEEEEESS
T ss_pred ec--CCE-EEEE-------eCCCEEEEEECC
Confidence 54 334 3445 678888888864
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.55 E-value=5.4e-14 Score=89.50 Aligned_cols=99 Identities=10% Similarity=0.042 Sum_probs=79.7
Q ss_pred cccccCeeeecCCCCceeee-----eeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCce
Q psy8803 2 KSWYEEYKRLDYHTPIVETE-----VLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYT 76 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~-----~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 76 (111)
++..|+.|++||..+++... .+.+|...|.+++|+++++++++++.|+.+++||++....... ... .-..+
T Consensus 139 ~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~---~~~-~~~~~ 214 (433)
T 3bws_A 139 PLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKAT---VDL-TGKWS 214 (433)
T ss_dssp EBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEE---EEC-SSSSE
T ss_pred EeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEE---EcC-CCCCe
Confidence 45678899999999887766 4457888999999999999999999999999999987665442 111 11356
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
..++|+|++..+++++ ..++.|++||++
T Consensus 215 ~~~~~~~~~~~l~~~~-------~~~~~i~~~d~~ 242 (433)
T 3bws_A 215 KILLYDPIRDLVYCSN-------WISEDISVIDRK 242 (433)
T ss_dssp EEEEEETTTTEEEEEE-------TTTTEEEEEETT
T ss_pred eEEEEcCCCCEEEEEe-------cCCCcEEEEECC
Confidence 6889999999988877 678999999974
No 123
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.55 E-value=3.3e-14 Score=91.01 Aligned_cols=98 Identities=23% Similarity=0.314 Sum_probs=72.4
Q ss_pred CcccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 1 KKSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 1 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++++.||+|++||+.+++.+..+.+|...|.++.|+ +..+++++.|+.+++||++.............. -.++..++
T Consensus 187 ~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~ 263 (435)
T 1p22_A 187 ITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNVVD 263 (435)
T ss_dssp EEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCC-SSCEEEEE
T ss_pred EEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCC-CCcEEEEE
Confidence 367889999999999999999999999999999996 469999999999999999875433210011111 13445556
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
| ++..+ +++ +.|+.|++||++
T Consensus 264 ~--~~~~l-~s~-------~~dg~i~vwd~~ 284 (435)
T 1p22_A 264 F--DDKYI-VSA-------SGDRTIKVWNTS 284 (435)
T ss_dssp E--ETTEE-EEE-------ETTSEEEEEETT
T ss_pred e--CCCEE-EEE-------eCCCeEEEEECC
Confidence 6 44454 445 678889999874
No 124
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.54 E-value=1.9e-13 Score=84.82 Aligned_cols=93 Identities=14% Similarity=0.206 Sum_probs=69.9
Q ss_pred eeeecCCCCceeeeeeecccccEEEEEEcCC---CcEEEEEeCCCeEEEEecCC-CceeeeecceeeeecCceeeEEEcc
Q psy8803 8 YKRLDYHTPIVETEVLTQHTHQVLHVSFSHN---GRYFATCSKDGYILVWTSSY-PSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~---~~~l~s~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
.+..++..+.+.+..+.+|.+.|.+++|+|+ +++|++++.|+.|++||++. ...... .... .-.+++.++|+|
T Consensus 20 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~--~~~~-h~~~v~~~~~~~ 96 (368)
T 3mmy_A 20 SATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPK--AQQM-HTGPVLDVCWSD 96 (368)
T ss_dssp ---CCSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEE--EEEE-CSSCEEEEEECT
T ss_pred EeccCCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEE--Eecc-ccCCEEEEEECc
Confidence 3445666667788888999999999999999 69999999999999999986 433321 1111 125677888999
Q ss_pred CCCEEEEeccccCCccccCceEEEeecC
Q psy8803 84 SDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
++..++ ++ +.|+.|++||++
T Consensus 97 ~~~~l~-s~-------~~dg~v~iwd~~ 116 (368)
T 3mmy_A 97 DGSKVF-TA-------SCDKTAKMWDLS 116 (368)
T ss_dssp TSSEEE-EE-------ETTSEEEEEETT
T ss_pred CCCEEE-EE-------cCCCcEEEEEcC
Confidence 888775 44 679999999974
No 125
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.54 E-value=1.1e-13 Score=85.40 Aligned_cols=99 Identities=16% Similarity=0.046 Sum_probs=74.2
Q ss_pred cccccCeeeecCCCC-ce--eeeeeecccccEEEEEEcC-CCcEEEEEeCCCeEEEEecCCC------ceeeeecceeee
Q psy8803 2 KSWYEEYKRLDYHTP-IV--ETEVLTQHTHQVLHVSFSH-NGRYFATCSKDGYILVWTSSYP------SKVKYSHDMKTF 71 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~-~~--~~~~~~~~~~~v~~i~~s~-~~~~l~s~~~d~~i~iw~~~~~------~~~~~~~~~~~~ 71 (111)
++..|+.|++||+.. +. .......|...+.+++|+| +++.+++++.|+.+++|+++.. ..... ....
T Consensus 165 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~---~~~~ 241 (342)
T 1yfq_A 165 VGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA---FRCH 241 (342)
T ss_dssp EEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE---EECC
T ss_pred EEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee---eecc
Confidence 567899999999987 43 3334456888999999999 9999999999999999999765 22221 1111
Q ss_pred e--------cCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 72 S--------WKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 72 ~--------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
. ..++..++|+|++..++ ++ +.|+.|++||++
T Consensus 242 ~~~~~~~~~~~~i~~~~~s~~~~~l~-~~-------~~dg~i~vwd~~ 281 (342)
T 1yfq_A 242 RLNLKDTNLAYPVNSIEFSPRHKFLY-TA-------GSDGIISCWNLQ 281 (342)
T ss_dssp CCCTTCCSSCCCEEEEEECTTTCCEE-EE-------ETTSCEEEEETT
T ss_pred cccccccccceeEEEEEEcCCCCEEE-Ee-------cCCceEEEEcCc
Confidence 0 12677889999887764 45 679999999974
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.52 E-value=4.9e-13 Score=84.09 Aligned_cols=97 Identities=10% Similarity=-0.019 Sum_probs=76.4
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEE-EEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFA-TCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~-s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++..|++|++||..+++.+..+..+. .+.+++|+|+++.|+ +++.++.|++||+.+++..... . . ...+..++
T Consensus 49 ~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~---~-~-~~~~~~~~ 122 (391)
T 1l0q_A 49 ANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTV---K-T-GKSPLGLA 122 (391)
T ss_dssp EEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE---E-C-SSSEEEEE
T ss_pred ECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEE---e-C-CCCcceEE
Confidence 35589999999999999888877554 899999999998765 5556799999999987655421 1 1 13456789
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|++..+++++ +.++.|++||++
T Consensus 123 ~s~dg~~l~~~~-------~~~~~v~~~d~~ 146 (391)
T 1l0q_A 123 LSPDGKKLYVTN-------NGDKTVSVINTV 146 (391)
T ss_dssp ECTTSSEEEEEE-------TTTTEEEEEETT
T ss_pred ECCCCCEEEEEe-------CCCCEEEEEECC
Confidence 999999887777 778999999974
No 127
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.52 E-value=1.3e-13 Score=88.35 Aligned_cols=54 Identities=15% Similarity=0.107 Sum_probs=26.8
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~ 58 (111)
++.||+|++||+.+++.+..+.+|...|.++.|+ ++.+++++.|+.+++||++.
T Consensus 175 ~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~ 228 (445)
T 2ovr_B 175 GSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIET 228 (445)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSS
T ss_pred EeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCC
Confidence 4445555555555555555555555555555552 33445555555555555444
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.49 E-value=1.6e-12 Score=82.67 Aligned_cols=105 Identities=6% Similarity=0.006 Sum_probs=80.1
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEE-EEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFA-TCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~-s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
++..|+.|++||+.+++.+..+..|...+.+++|+|+++.++ +++.++.|++||+++......... ...+..++
T Consensus 186 s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-----~~~~~~~~ 260 (433)
T 3bws_A 186 SQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-----IGLPRGLL 260 (433)
T ss_dssp EEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-----CSEEEEEE
T ss_pred EECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-----CCCceEEE
Confidence 456789999999999988888888999999999999988774 555899999999988765542111 12356789
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+|++..+++++...+.....++.|++||++
T Consensus 261 ~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~ 291 (433)
T 3bws_A 261 LSKDGKELYIAQFSASNQESGGGRLGIYSMD 291 (433)
T ss_dssp ECTTSSEEEEEEEESCTTCSCCEEEEEEETT
T ss_pred EcCCCCEEEEEECCCCccccCCCeEEEEECC
Confidence 9999988877653333221258899999974
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.39 E-value=1.4e-11 Score=78.84 Aligned_cols=92 Identities=14% Similarity=0.130 Sum_probs=70.8
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCC---eEEEEecCCCceeeeecceeeeecCceeeEEEcc
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDG---YILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
+.|++||+. +.....+.+|...+.+++|+|||+.|+.++.++ .|++||+++++.... .... ..+..++|+|
T Consensus 159 ~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l----~~~~-~~~~~~~~sp 232 (415)
T 2hqs_A 159 YELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV----ASFP-RHNGAPAFSP 232 (415)
T ss_dssp EEEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEE----ECCS-SCEEEEEECT
T ss_pred ceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEe----ecCC-CcccCEEEcC
Confidence 799999997 555677788999999999999999999998775 999999988765431 1111 2456789999
Q ss_pred CCCEEEEeccccCCcccc--CceEEEeecC
Q psy8803 84 SDTLLLVSGVHFGTPQST--SGEIAVFSLQ 111 (111)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~--~~~i~iw~~~ 111 (111)
++..++.++ +. +..|.+||++
T Consensus 233 dg~~la~~~-------~~~g~~~i~~~d~~ 255 (415)
T 2hqs_A 233 DGSKLAFAL-------SKTGSLNLYVMDLA 255 (415)
T ss_dssp TSSEEEEEE-------CTTSSCEEEEEETT
T ss_pred CCCEEEEEE-------ecCCCceEEEEECC
Confidence 999888665 33 3458889864
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.38 E-value=1.9e-11 Score=80.85 Aligned_cols=96 Identities=16% Similarity=0.074 Sum_probs=76.1
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEec--CCCceeeeecceeeeecCceeeE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTS--SYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~--~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
+...|++|.+||..+++.+..+..+.. +..+.|+||++++++++.++.|.+||+ .+...... +.. -.....+
T Consensus 154 s~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~---i~~--g~~p~~v 227 (543)
T 1nir_A 154 TLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAE---IKI--GIEARSV 227 (543)
T ss_dssp EEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEE---EEC--CSEEEEE
T ss_pred EEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEE---Eec--CCCcceE
Confidence 456789999999999999888873333 889999999999999999999999999 66554432 221 1345789
Q ss_pred EEcc----CCCEEEEeccccCCccccCceEEEeec
Q psy8803 80 QFNE----SDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 80 ~~~~----~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+|+| ++..++++. ..+++|.+||.
T Consensus 228 a~sp~~~~dg~~l~v~~-------~~~~~v~v~D~ 255 (543)
T 1nir_A 228 ESSKFKGYEDRYTIAGA-------YWPPQFAIMDG 255 (543)
T ss_dssp EECCSTTCTTTEEEEEE-------EESSEEEEEET
T ss_pred EeCCCcCCCCCEEEEEE-------ccCCeEEEEec
Confidence 9999 999887765 56888999985
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.27 E-value=5.9e-11 Score=71.45 Aligned_cols=85 Identities=15% Similarity=0.116 Sum_probs=64.2
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC-CceeeeecceeeeecCceeeEEE
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY-PSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
...|+.|++||+.+++.. .+..|...+.+++|+|+++.|++++ ++.|.+||+.. ........ ......+..++|
T Consensus 18 ~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~---~~~~~~~~~~~~ 92 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDT---GFATICNNDHGI 92 (297)
T ss_dssp CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCC---TTCCCBCSCCEE
T ss_pred CCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecc---ccccccccceEE
Confidence 467899999999988765 4556889999999999999999987 77999999987 65443111 111123456889
Q ss_pred ccCCCEEEEec
Q psy8803 82 NESDTLLLVSG 92 (111)
Q Consensus 82 ~~~~~~~~~~~ 92 (111)
+|++..++++.
T Consensus 93 spdg~~l~~~~ 103 (297)
T 2ojh_A 93 SPDGALYAISD 103 (297)
T ss_dssp CTTSSEEEEEE
T ss_pred CCCCCEEEEEE
Confidence 99998887754
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.25 E-value=2.8e-10 Score=72.88 Aligned_cols=91 Identities=11% Similarity=0.052 Sum_probs=65.5
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEE-EEeCCC--eEEEEecCCCceeeeecceeeeecCceeeEEEcc
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFA-TCSKDG--YILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~-s~~~d~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
..|++||+.+++.. .+..|...+.+++|+|||+.|+ +++.++ .|.+||+.+...... ... ...+..++|+|
T Consensus 203 ~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l----~~~-~~~~~~~~~sp 276 (415)
T 2hqs_A 203 SALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQV----TDG-RSNNTEPTWFP 276 (415)
T ss_dssp CEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEC----CCC-SSCEEEEEECT
T ss_pred cEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeC----cCC-CCcccceEECC
Confidence 48999999988764 5677888999999999999777 666555 499999987654321 111 13456788999
Q ss_pred CCCEEEEeccccCCccccCc--eEEEeec
Q psy8803 84 SDTLLLVSGVHFGTPQSTSG--EIAVFSL 110 (111)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~--~i~iw~~ 110 (111)
++..++.++ ..++ .|.+||+
T Consensus 277 dg~~l~~~s-------~~~g~~~i~~~d~ 298 (415)
T 2hqs_A 277 DSQNLAFTS-------DQAGRPQVYKVNI 298 (415)
T ss_dssp TSSEEEEEE-------CTTSSCEEEEEET
T ss_pred CCCEEEEEE-------CCCCCcEEEEEEC
Confidence 999887765 2233 5777775
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.22 E-value=5.7e-10 Score=68.71 Aligned_cols=98 Identities=6% Similarity=-0.050 Sum_probs=69.7
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEe-CCCeEEEEecCCCce-eeeecceeeeecCceeeE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCS-KDGYILVWTSSYPSK-VKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~-~d~~i~iw~~~~~~~-~~~~~~~~~~~~~~~~~v 79 (111)
+...++.|.+||..+++.+..+..+.... .++|+|+++.++.++ .++.+.+||..+... ... .. ....+...+
T Consensus 15 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~---~~-~~~~~~~~~ 89 (331)
T 3u4y_A 15 VEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVA---IQ-EGQSSMADV 89 (331)
T ss_dssp EEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEE---EE-ECSSCCCCE
T ss_pred EecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEe---cc-cCCCCccce
Confidence 45678999999999998877777666667 999999998655554 488999999987665 321 11 111233338
Q ss_pred EEccCCCEEEEeccccCCccccCc--eEEEeecC
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSG--EIAVFSLQ 111 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~--~i~iw~~~ 111 (111)
+|+|++..+++.. ..++ .|.+||++
T Consensus 90 ~~s~dg~~l~~~~-------~~~~~~~i~v~d~~ 116 (331)
T 3u4y_A 90 DITPDDQFAVTVT-------GLNHPFNMQSYSFL 116 (331)
T ss_dssp EECTTSSEEEECC-------CSSSSCEEEEEETT
T ss_pred EECCCCCEEEEec-------CCCCcccEEEEECC
Confidence 9999999887432 2223 89999974
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.19 E-value=5.1e-10 Score=68.86 Aligned_cols=97 Identities=13% Similarity=0.046 Sum_probs=69.2
Q ss_pred ccccCeeeecCCC-Cc--eeeeeeecccccEEEEEEcCCCcEEEEEeCC-CeEEEEecC--CCceeeeecceeeeecCce
Q psy8803 3 SWYEEYKRLDYHT-PI--VETEVLTQHTHQVLHVSFSHNGRYFATCSKD-GYILVWTSS--YPSKVKYSHDMKTFSWKYT 76 (111)
Q Consensus 3 ~~~d~~i~iw~~~-~~--~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d-~~i~iw~~~--~~~~~~~~~~~~~~~~~~~ 76 (111)
+..|+.|++|++. ++ +.+.. ..+...+.+++|+|+++.|++++.+ +.+.+|++. .+..... ..+.. . ..+
T Consensus 11 ~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~-~-~~~ 86 (343)
T 1ri6_A 11 SPESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFA-AESAL-P-GSL 86 (343)
T ss_dssp EGGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE-EEEEC-S-SCC
T ss_pred CCCCCeEEEEEECCCCcEEEeee-EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeec-ccccc-C-CCC
Confidence 3679999999985 23 23333 3477788999999999988888776 899999997 4332211 01111 1 245
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
..++|+|++..+++++ ..++.|.+||+
T Consensus 87 ~~~~~s~dg~~l~~~~-------~~~~~i~~~d~ 113 (343)
T 1ri6_A 87 THISTDHQGQFVFVGS-------YNAGNVSVTRL 113 (343)
T ss_dssp SEEEECTTSSEEEEEE-------TTTTEEEEEEE
T ss_pred cEEEEcCCCCEEEEEe-------cCCCeEEEEEC
Confidence 6789999999888776 56888999997
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.16 E-value=6.7e-10 Score=68.74 Aligned_cols=100 Identities=9% Similarity=0.081 Sum_probs=75.5
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
.++.|.+||..+++.+..+..+...+..+.|+|+++.++.++.++.+.+||..+.+..................++|+|+
T Consensus 162 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~d 241 (353)
T 3vgz_A 162 KESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTA 241 (353)
T ss_dssp SSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETT
T ss_pred CCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCC
Confidence 47889999999998888777566668899999999999999889999999998876554211100000123456899999
Q ss_pred CCEEEEeccccCCccccCceEEEeecC
Q psy8803 85 DTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+..++++. ..++.|.+||++
T Consensus 242 g~~l~~~~-------~~~~~v~~~d~~ 261 (353)
T 3vgz_A 242 RQRAFITD-------SKAAEVLVVDTR 261 (353)
T ss_dssp TTEEEEEE-------SSSSEEEEEETT
T ss_pred CCEEEEEe-------CCCCEEEEEECC
Confidence 99887776 567889999863
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.16 E-value=2.7e-10 Score=70.16 Aligned_cols=99 Identities=13% Similarity=0.123 Sum_probs=67.9
Q ss_pred cccCeeeecCC---CCceeeeeeecccccEEEEEEcCCCcEEEEEe-CCCeEEEEecCC-Cceeeeec-ceeeeecCcee
Q psy8803 4 WYEEYKRLDYH---TPIVETEVLTQHTHQVLHVSFSHNGRYFATCS-KDGYILVWTSSY-PSKVKYSH-DMKTFSWKYTQ 77 (111)
Q Consensus 4 ~~d~~i~iw~~---~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~-~d~~i~iw~~~~-~~~~~~~~-~~~~~~~~~~~ 77 (111)
..++.|.+||+ ...+....+.. ...+.+++|+|+++.++.++ .++.+.+||+.. +....... .........+.
T Consensus 103 ~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 181 (343)
T 1ri6_A 103 YNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPR 181 (343)
T ss_dssp TTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEE
T ss_pred cCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcc
Confidence 34788999999 33444444443 34688999999998777776 789999999986 43322100 01100112456
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.++|+|++..+++++ ..++.|.+||+
T Consensus 182 ~~~~~pdg~~l~~~~-------~~~~~i~~~~~ 207 (343)
T 1ri6_A 182 HMVFHPNEQYAYCVN-------ELNSSVDVWEL 207 (343)
T ss_dssp EEEECTTSSEEEEEE-------TTTTEEEEEES
T ss_pred eEEECCCCCEEEEEe-------CCCCEEEEEEe
Confidence 789999999887776 67888999997
No 137
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.16 E-value=7.6e-11 Score=79.54 Aligned_cols=93 Identities=12% Similarity=0.050 Sum_probs=70.7
Q ss_pred cccCeeeecCCCCceeeeeeecccc---cEEEEEEcCCCcEEEEEeC---------CCeEEEEecCCCceeeeecceeee
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQHTH---QVLHVSFSHNGRYFATCSK---------DGYILVWTSSYPSKVKYSHDMKTF 71 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~~~---~v~~i~~s~~~~~l~s~~~---------d~~i~iw~~~~~~~~~~~~~~~~~ 71 (111)
..|++|++||+..++....+.++.. .+..++|||||+.|+.++. ++.+++||+.++..... ..+.
T Consensus 33 ~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~-~~l~-- 109 (719)
T 1z68_A 33 SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG-NELP-- 109 (719)
T ss_dssp CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS-SCCC--
T ss_pred cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccc-eecC--
Confidence 3589999999998887766665544 3899999999999998876 68999999988765210 0111
Q ss_pred ecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 72 SWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 72 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
..+..++|+|++..++.+ .++.|.+||+
T Consensus 110 --~~~~~~~~SPDG~~la~~---------~~~~i~~~~~ 137 (719)
T 1z68_A 110 --RPIQYLCWSPVGSKLAYV---------YQNNIYLKQR 137 (719)
T ss_dssp --SSBCCEEECSSTTCEEEE---------ETTEEEEESS
T ss_pred --cccccceECCCCCEEEEE---------ECCeEEEEeC
Confidence 235578999999988774 3678999986
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.14 E-value=1.9e-10 Score=77.48 Aligned_cols=97 Identities=11% Similarity=0.021 Sum_probs=70.5
Q ss_pred ccccCeeeecCCCCceeeeeeecccc---cEEEEEEcCCCcEEEEEeCC---------CeEEEEecCCCceeeeecceee
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTH---QVLHVSFSHNGRYFATCSKD---------GYILVWTSSYPSKVKYSHDMKT 70 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~---~v~~i~~s~~~~~l~s~~~d---------~~i~iw~~~~~~~~~~~~~~~~ 70 (111)
++.||+|++||..+++....+..|.. .+..++|||||+.|+.++.+ +.+.+||+.++....... ...
T Consensus 33 ~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~-~~~ 111 (723)
T 1xfd_A 33 REQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDP-PEV 111 (723)
T ss_dssp CCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCC-TTC
T ss_pred EeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccC-Ccc
Confidence 35789999999998887777776654 48999999999999998764 678899998765422110 000
Q ss_pred eecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 71 FSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 71 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
. -..+..++|+|++..++... ++.|.+||+
T Consensus 112 ~-~~~~~~~~~SPdG~~la~~~---------~~~i~~~~~ 141 (723)
T 1xfd_A 112 S-NAKLQYAGWGPKGQQLIFIF---------ENNIYYCAH 141 (723)
T ss_dssp C-SCCCSBCCBCSSTTCEEEEE---------TTEEEEESS
T ss_pred c-cccccccEECCCCCEEEEEE---------CCeEEEEEC
Confidence 0 01245678899998887744 367999986
No 139
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.12 E-value=1.2e-09 Score=67.85 Aligned_cols=98 Identities=9% Similarity=0.053 Sum_probs=67.2
Q ss_pred cCeeeecCCCCce--eeeeeecccccEEEEEEcCCCcEEEEEe-CCCeEEEEecCCCceeeeecceeee--------ecC
Q psy8803 6 EEYKRLDYHTPIV--ETEVLTQHTHQVLHVSFSHNGRYFATCS-KDGYILVWTSSYPSKVKYSHDMKTF--------SWK 74 (111)
Q Consensus 6 d~~i~iw~~~~~~--~~~~~~~~~~~v~~i~~s~~~~~l~s~~-~d~~i~iw~~~~~~~~~~~~~~~~~--------~~~ 74 (111)
++.|.+|++..++ .+..+..+...+..++|+||++.|++++ .++.+.+|++...........+... ...
T Consensus 62 ~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~ 141 (347)
T 3hfq_A 62 EGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGS 141 (347)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSC
T ss_pred CceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCC
Confidence 6899999997664 4444455777888999999999888777 6789999999632111110011100 011
Q ss_pred ceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 75 YTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.+..++|+|++. ++++. ..++.|.+|+++
T Consensus 142 ~~~~~~~spdg~-l~v~~-------~~~~~v~~~~~~ 170 (347)
T 3hfq_A 142 HIHYTDLTPDNR-LAVID-------LGSDKVYVYNVS 170 (347)
T ss_dssp CEEEEEECTTSC-EEEEE-------TTTTEEEEEEEC
T ss_pred CceEEEECCCCc-EEEEe-------CCCCEEEEEEEC
Confidence 356789999998 66766 667889999874
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.09 E-value=1.1e-09 Score=67.35 Aligned_cols=95 Identities=5% Similarity=-0.014 Sum_probs=69.4
Q ss_pred cccCeeeecCCCCcee-eeeeecccccEEEEEEcCCCcEEEEEeCCC---eEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 4 WYEEYKRLDYHTPIVE-TEVLTQHTHQVLHVSFSHNGRYFATCSKDG---YILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~-~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
..++.|.+||..+++. ...+..+.....+++|+|+++.+++...++ .|.+||+........ +.. . .....+
T Consensus 59 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~---~~~-~-~~~~~~ 133 (331)
T 3u4y_A 59 DFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIST---IPI-P-YDAVGI 133 (331)
T ss_dssp STTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEE---EEC-C-TTEEEE
T ss_pred CCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEE---EEC-C-CCccce
Confidence 4478999999998876 666666665655599999999888555542 899999988765542 111 1 234688
Q ss_pred EEccCCCEEEEeccccCCccccCce-EEEeec
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGE-IAVFSL 110 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~-i~iw~~ 110 (111)
+|+|++..++++. ..++. |.+|++
T Consensus 134 ~~spdg~~l~~~~-------~~~~~~i~~~~~ 158 (331)
T 3u4y_A 134 AISPNGNGLILID-------RSSANTVRRFKI 158 (331)
T ss_dssp EECTTSSCEEEEE-------ETTTTEEEEEEE
T ss_pred EECCCCCEEEEEe-------cCCCceEEEEEE
Confidence 9999998777766 55566 999986
No 141
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.08 E-value=2.7e-09 Score=66.29 Aligned_cols=98 Identities=10% Similarity=0.032 Sum_probs=65.1
Q ss_pred ccCeeeecCCCC-c--eeeeeeec---------ccccEEEEEEcCCCcEEEEEeCCCeEEEEecC-CCceeeeecceeee
Q psy8803 5 YEEYKRLDYHTP-I--VETEVLTQ---------HTHQVLHVSFSHNGRYFATCSKDGYILVWTSS-YPSKVKYSHDMKTF 71 (111)
Q Consensus 5 ~d~~i~iw~~~~-~--~~~~~~~~---------~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~-~~~~~~~~~~~~~~ 71 (111)
.++.+++|++.. + ..+..+.. ....+.+++|+|+++++++...++.+.+|++. .+...... .....
T Consensus 106 ~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~-~~~~~ 184 (347)
T 3hfq_A 106 HKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQS-VLTME 184 (347)
T ss_dssp TTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEE-EEECC
T ss_pred CCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEee-eEEcC
Confidence 678999999963 2 23333321 12347889999999977777778899999998 44322210 11111
Q ss_pred ecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 72 SWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 72 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.......++|+|++..++++. ..++.|.+|++
T Consensus 185 ~g~~p~~~~~spdg~~l~v~~-------~~~~~v~v~~~ 216 (347)
T 3hfq_A 185 AGFGPRHLVFSPDGQYAFLAG-------ELSSQIASLKY 216 (347)
T ss_dssp TTCCEEEEEECTTSSEEEEEE-------TTTTEEEEEEE
T ss_pred CCCCCceEEECCCCCEEEEEe-------CCCCEEEEEEe
Confidence 112356789999999888876 67788999985
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.08 E-value=9.5e-10 Score=74.35 Aligned_cols=89 Identities=4% Similarity=-0.025 Sum_probs=66.0
Q ss_pred eeeecCCCCceeeeeeecccc------------------------cEEEEEEcCCCcEEEEEeCCCeEEEEecCCC---c
Q psy8803 8 YKRLDYHTPIVETEVLTQHTH------------------------QVLHVSFSHNGRYFATCSKDGYILVWTSSYP---S 60 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~~~~------------------------~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~---~ 60 (111)
.|.+||+.+++....+..+.. .+..++|+|||+.|+.++. +.|.+||+.++ .
T Consensus 65 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~ 143 (741)
T 2ecf_A 65 DLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAA 143 (741)
T ss_dssp EEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTS
T ss_pred EEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcce
Confidence 899999998876666554432 3788999999999999886 89999999876 4
Q ss_pred eeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 61 KVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
... +... -..+..++|+|++..++... ++.|.+||++
T Consensus 144 ~~~----l~~~-~~~~~~~~~SPDG~~la~~~---------~~~i~~~d~~ 180 (741)
T 2ecf_A 144 VRQ----LTHG-EGFATDAKLSPKGGFVSFIR---------GRNLWVIDLA 180 (741)
T ss_dssp CCB----CCCS-SSCEEEEEECTTSSEEEEEE---------TTEEEEEETT
T ss_pred EEE----cccC-CcccccccCCCCCCEEEEEe---------CCcEEEEecC
Confidence 322 1111 13456788999999887743 5579999863
No 143
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.08 E-value=5.7e-09 Score=69.11 Aligned_cols=101 Identities=7% Similarity=-0.034 Sum_probs=75.8
Q ss_pred cccccCeeeecCC--CCceeeeeeecccccEEEEEEcC----CCcEEEEEeC-CCeEEEEecCCCceeeeecc----eee
Q psy8803 2 KSWYEEYKRLDYH--TPIVETEVLTQHTHQVLHVSFSH----NGRYFATCSK-DGYILVWTSSYPSKVKYSHD----MKT 70 (111)
Q Consensus 2 ~~~~d~~i~iw~~--~~~~~~~~~~~~~~~v~~i~~s~----~~~~l~s~~~-d~~i~iw~~~~~~~~~~~~~----~~~ 70 (111)
+++.|++|++||+ .+++.+..+. +......++|+| |++++++++. ++.+.+||..+.+....... +..
T Consensus 195 v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~ 273 (543)
T 1nir_A 195 VIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDT 273 (543)
T ss_dssp EEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSS
T ss_pred EECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCc
Confidence 3566799999999 7788888877 455789999999 9999888874 89999999988766542110 000
Q ss_pred ---eecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 71 ---FSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 71 ---~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.....+..+.++|++..++++. ..+++|.+||+
T Consensus 274 ~~~~~~~~v~~i~~s~~~~~~~vs~-------~~~g~i~vvd~ 309 (543)
T 1nir_A 274 QTYHPEPRVAAIIASHEHPEFIVNV-------KETGKVLLVNY 309 (543)
T ss_dssp CCEESCCCEEEEEECSSSSEEEEEE-------TTTTEEEEEEC
T ss_pred cccccCCceEEEEECCCCCEEEEEE-------CCCCeEEEEEe
Confidence 0011356788999888888887 77899999986
No 144
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.07 E-value=5.2e-10 Score=74.00 Aligned_cols=95 Identities=14% Similarity=-0.009 Sum_probs=67.4
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCC--eEEEEecCCCceee---eecceeeeecCceeeEEE
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDG--YILVWTSSYPSKVK---YSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~--~i~iw~~~~~~~~~---~~~~~~~~~~~~~~~v~~ 81 (111)
+.|.+||+.+++.. .+..|.+.+..++|+|||+.|+++..++ .|.+||+.++.... +...+....-......+|
T Consensus 175 ~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (582)
T 3o4h_A 175 VSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGY 253 (582)
T ss_dssp EEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEE
T ss_pred eEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeE
Confidence 67999999877654 6778888999999999999999888888 89999998765442 111111111000112238
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+|++ .+++++ +.++.+++|++
T Consensus 254 spdg-~~~~~~-------~~~g~~~l~~~ 274 (582)
T 3o4h_A 254 LPDG-RLAVVA-------RREGRSAVFID 274 (582)
T ss_dssp CTTS-CEEEEE-------EETTEEEEEET
T ss_pred cCCC-cEEEEE-------EcCCcEEEEEE
Confidence 9999 666666 77889999985
No 145
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.05 E-value=9.3e-09 Score=63.60 Aligned_cols=96 Identities=10% Similarity=0.004 Sum_probs=71.8
Q ss_pred ccccCeeeecCCCCceeeeeeec----ccccEEEEEEcCCCcEEEEEe-CCCeEEEEecCCCceeeeecceeeeecCcee
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQ----HTHQVLHVSFSHNGRYFATCS-KDGYILVWTSSYPSKVKYSHDMKTFSWKYTQ 77 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~----~~~~v~~i~~s~~~~~l~s~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 77 (111)
+..++.+.+||..+++.+..+.. +...+..++|+|+++.++.++ .++.+.+||..+.+...... . ....
T Consensus 202 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~-----~~~~ 275 (353)
T 3vgz_A 202 TNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA-A-----PESL 275 (353)
T ss_dssp ECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE-C-----SSCC
T ss_pred EcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE-c-----CCCc
Confidence 34588999999998887776653 556788899999998665554 45899999998876554211 1 1224
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.++|+|++..++++. ..++.|.+||++
T Consensus 276 ~~~~s~dg~~l~v~~-------~~~~~v~~~d~~ 302 (353)
T 3vgz_A 276 AVLFNPARNEAYVTH-------RQAGKVSVIDAK 302 (353)
T ss_dssp CEEEETTTTEEEEEE-------TTTTEEEEEETT
T ss_pred eEEECCCCCEEEEEE-------CCCCeEEEEECC
Confidence 689999999887776 678899999963
No 146
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.05 E-value=2.6e-09 Score=65.93 Aligned_cols=109 Identities=6% Similarity=-0.081 Sum_probs=71.6
Q ss_pred cccccCeeeecCCCCceeeeeeeccc-ccEEEEEEcCCCcE-EEEEeCCCeEEEEecCCCceeeeecceeee---ecCce
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHT-HQVLHVSFSHNGRY-FATCSKDGYILVWTSSYPSKVKYSHDMKTF---SWKYT 76 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~-~~v~~i~~s~~~~~-l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~---~~~~~ 76 (111)
+...+++|.+||..+++.+..+..+. ..+..++|+|+++. +++...++.|.+||+.+.+...... .... ....+
T Consensus 16 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~-~~~~~~~~~~~~ 94 (349)
T 1jmx_B 16 VTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN-LSSVPGEVGRSM 94 (349)
T ss_dssp EEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-SCCSTTEEEECS
T ss_pred EeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE-cccccccccccc
Confidence 45678999999999988877776433 25778999999975 4556678999999998876543111 0000 00124
Q ss_pred eeEEEccCCCEEEEecccc----CCccccCceEEEeecC
Q psy8803 77 QYSQFNESDTLLLVSGVHF----GTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~----~~~~~~~~~i~iw~~~ 111 (111)
..++|+|++..++++..+. ......++.|.+||++
T Consensus 95 ~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~ 133 (349)
T 1jmx_B 95 YSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTA 133 (349)
T ss_dssp SCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGG
T ss_pred cceEECCCCCEEEEEcccccccccccccCCCeEEEEECC
Confidence 5789999999887765110 0000014789999963
No 147
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.02 E-value=5.2e-09 Score=73.57 Aligned_cols=101 Identities=8% Similarity=-0.022 Sum_probs=70.9
Q ss_pred cCeee-ecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 6 EEYKR-LDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 6 d~~i~-iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
+..+. +|+...++.. .+.+|...+..++|+|||+.|+.++.++.+++||+.++...... ......+..++|+|+
T Consensus 357 ~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~----~~~~~~v~~~~~SpD 431 (1045)
T 1k32_A 357 EGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE----RSREAMITDFTISDN 431 (1045)
T ss_dssp TEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE----ECSSSCCCCEEECTT
T ss_pred CCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEec----cCCCCCccceEECCC
Confidence 45677 7888766543 44478889999999999999999999999999999887654321 011134567889999
Q ss_pred CCEEEEecccc--CCccccCceEEEeecC
Q psy8803 85 DTLLLVSGVHF--GTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 85 ~~~~~~~~~~~--~~~~~~~~~i~iw~~~ 111 (111)
+..++.++.+. ......++.|.+||++
T Consensus 432 G~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 432 SRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp SCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred CCeEEEEecCccccccCCCCCeEEEEECC
Confidence 99887765221 0001234689999973
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.02 E-value=8e-09 Score=64.50 Aligned_cols=97 Identities=10% Similarity=0.035 Sum_probs=65.0
Q ss_pred cccCeeeecCCCCcee--eeeee---cccccEEEEEEcCCCcEEEEEeC--CCeEEEEecC--CCceeeeecceeeeecC
Q psy8803 4 WYEEYKRLDYHTPIVE--TEVLT---QHTHQVLHVSFSHNGRYFATCSK--DGYILVWTSS--YPSKVKYSHDMKTFSWK 74 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~--~~~~~---~~~~~v~~i~~s~~~~~l~s~~~--d~~i~iw~~~--~~~~~~~~~~~~~~~~~ 74 (111)
..++.|.+|++..++. +..+. .+......++|+||+++|+.+.. ++.+.+|++. ++.... ...... -.
T Consensus 230 ~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~-~~~~~~--g~ 306 (361)
T 3scy_A 230 EIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTK-VGYQLT--GI 306 (361)
T ss_dssp TTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEE-EEEEEC--SS
T ss_pred CCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEE-eeEecC--CC
Confidence 3578999999986643 22222 23345689999999998766654 4899999996 333211 111111 13
Q ss_pred ceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 75 YTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.+..++|+|++..++++. ..++.|.+|++
T Consensus 307 ~~~~~~~spdg~~l~~~~-------~~~~~v~v~~~ 335 (361)
T 3scy_A 307 HPRNFIITPNGKYLLVAC-------RDTNVIQIFER 335 (361)
T ss_dssp CCCEEEECTTSCEEEEEE-------TTTTEEEEEEE
T ss_pred CCceEEECCCCCEEEEEE-------CCCCCEEEEEE
Confidence 456789999999888876 56788999754
No 149
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.02 E-value=4.9e-09 Score=64.32 Aligned_cols=110 Identities=9% Similarity=0.012 Sum_probs=71.5
Q ss_pred cccccCeeeecCCCCceeeeeeecccc--cEEEEEEcCCCcE-EEEEeCCCeEEEEecCCCceeeeec-ceeeeecCcee
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTH--QVLHVSFSHNGRY-FATCSKDGYILVWTSSYPSKVKYSH-DMKTFSWKYTQ 77 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~--~v~~i~~s~~~~~-l~s~~~d~~i~iw~~~~~~~~~~~~-~~~~~~~~~~~ 77 (111)
++..++.|.+||..+++.+..+..... .+..++|+|+++. +++...++.|.+||+.+.+...... ......-..+.
T Consensus 6 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 85 (337)
T 1pby_B 6 APARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLF 85 (337)
T ss_dssp EEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTT
T ss_pred EcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccccccc
Confidence 456799999999999888777763221 5788999999865 5666678899999998876543110 00000001345
Q ss_pred eEEEccCCCEEEEeccccCCccc----cCceEEEeecC
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQS----TSGEIAVFSLQ 111 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~----~~~~i~iw~~~ 111 (111)
.++|+|++..++++......... .++.|.+||++
T Consensus 86 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~ 123 (337)
T 1pby_B 86 GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE 123 (337)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETT
T ss_pred ceEECCCCCEEEEEecccccccccccccCceEEEEECC
Confidence 78999999888775311000000 36889999863
No 150
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.97 E-value=1.9e-08 Score=62.85 Aligned_cols=99 Identities=9% Similarity=0.088 Sum_probs=64.8
Q ss_pred cccCeeeecCCCCcee------e-------eeeecccccEEEEEEcCCCcEEEEEe-CCCeEEEEecCCCceeeeeccee
Q psy8803 4 WYEEYKRLDYHTPIVE------T-------EVLTQHTHQVLHVSFSHNGRYFATCS-KDGYILVWTSSYPSKVKYSHDMK 69 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~------~-------~~~~~~~~~v~~i~~s~~~~~l~s~~-~d~~i~iw~~~~~~~~~~~~~~~ 69 (111)
..++.+.+|++..... + .....+......++|+||++.++.++ .++.+.+|++..+..... ..+.
T Consensus 174 ~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~-~~~~ 252 (361)
T 3scy_A 174 LGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEI-QTVA 252 (361)
T ss_dssp TTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEE-EEEE
T ss_pred CCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEe-EEEe
Confidence 3477899998764321 1 11123445678999999999776666 688999999986543221 0111
Q ss_pred e--eecCceeeEEEccCCCEEEEeccccCCcccc-CceEEEeec
Q psy8803 70 T--FSWKYTQYSQFNESDTLLLVSGVHFGTPQST-SGEIAVFSL 110 (111)
Q Consensus 70 ~--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~i~iw~~ 110 (111)
. ........++|+|++..++++. .. ++.|.+|++
T Consensus 253 ~~~~~~~~~~~i~~spdg~~l~v~~-------~~~~~~i~v~~~ 289 (361)
T 3scy_A 253 ADTVNAQGSGDIHLSPDGKYLYASN-------RLKADGVAIFKV 289 (361)
T ss_dssp SCSSCCCCEEEEEECTTSSEEEEEE-------CSSSCEEEEEEE
T ss_pred cCCCCCCCcccEEECCCCCEEEEEC-------CCCCCEEEEEEE
Confidence 1 0112345789999999887766 44 678999987
No 151
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.95 E-value=7.7e-08 Score=60.43 Aligned_cols=98 Identities=6% Similarity=0.051 Sum_probs=66.4
Q ss_pred ccCeeeecCCC-Cceeeeeee----cccccEEEEEEcCCCcEEEEEeC-CCeEEEEecC-CCceeeeecceee-eecCce
Q psy8803 5 YEEYKRLDYHT-PIVETEVLT----QHTHQVLHVSFSHNGRYFATCSK-DGYILVWTSS-YPSKVKYSHDMKT-FSWKYT 76 (111)
Q Consensus 5 ~d~~i~iw~~~-~~~~~~~~~----~~~~~v~~i~~s~~~~~l~s~~~-d~~i~iw~~~-~~~~~~~~~~~~~-~~~~~~ 76 (111)
.++++.+|++. .++....+. .+...+..+.|+|||+.++.+.. +..|.+|++. +++..... .+.. .....+
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~-~~~~~~~g~~p 195 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVG-SVDAPDPGDHP 195 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEE-EEECSSTTCCE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEee-eEecCCCCCCC
Confidence 58899999997 355443333 24567899999999998777653 6799999998 55432210 1110 001346
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
..++|+|++..++++. ..++.|.+|++
T Consensus 196 ~~~~~spdg~~l~v~~-------~~~~~v~v~~~ 222 (365)
T 1jof_A 196 RWVAMHPTGNYLYALM-------EAGNRICEYVI 222 (365)
T ss_dssp EEEEECTTSSEEEEEE-------TTTTEEEEEEE
T ss_pred CEeEECCCCCEEEEEE-------CCCCeEEEEEE
Confidence 6789999999887765 45678888864
No 152
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.93 E-value=2.2e-08 Score=63.11 Aligned_cols=99 Identities=13% Similarity=0.133 Sum_probs=69.7
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEe----------CCCeEEEEecCCCceeeeecce--eeee
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCS----------KDGYILVWTSSYPSKVKYSHDM--KTFS 72 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~----------~d~~i~iw~~~~~~~~~~~~~~--~~~~ 72 (111)
.|++|.+||..+++.+..+..+... .+.|+||++.+..+. .++.+.+||..+.+......-. ....
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 4789999999988888777765444 899999999888775 2567999999876655421000 0000
Q ss_pred cCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 73 WKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 73 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
-.....++++|++..++++. ...++.|.+||++
T Consensus 107 g~~p~~i~~spdg~~l~v~n------~~~~~~v~v~d~~ 139 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQN------ASPATSIGIVDVA 139 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEE------ESSSEEEEEEETT
T ss_pred CCCcceEEECCCCCEEEEEC------CCCCCeEEEEECC
Confidence 12345789999999988865 1226789999974
No 153
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.93 E-value=1.4e-08 Score=61.04 Aligned_cols=93 Identities=12% Similarity=0.019 Sum_probs=65.4
Q ss_pred ccCeeeecCCCC-ceeeeeeecc-cccEEEEEEcCCCcEEEEEe--CCCeEEEEec--CCCceeeeecceeeeecCceee
Q psy8803 5 YEEYKRLDYHTP-IVETEVLTQH-THQVLHVSFSHNGRYFATCS--KDGYILVWTS--SYPSKVKYSHDMKTFSWKYTQY 78 (111)
Q Consensus 5 ~d~~i~iw~~~~-~~~~~~~~~~-~~~v~~i~~s~~~~~l~s~~--~d~~i~iw~~--~~~~~~~~~~~~~~~~~~~~~~ 78 (111)
.++.|.+||+.. ++....+..+ ...+.++.|+|+++.|+.++ .++...+|.+ ....... +.. ......
T Consensus 60 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~----~~~--~~~~~~ 133 (297)
T 2ojh_A 60 SEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRL----MTK--NLPSYW 133 (297)
T ss_dssp ETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEE----CCS--SSSEEE
T ss_pred cCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEE----eec--CCCccc
Confidence 478999999998 7766655555 46788999999999999988 3345555554 4433222 111 023456
Q ss_pred EEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 79 SQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
++|+|++..++.++ ..++.++||++
T Consensus 134 ~~~spdg~~l~~~~-------~~~~~~~l~~~ 158 (297)
T 2ojh_A 134 HGWSPDGKSFTYCG-------IRDQVFDIYSM 158 (297)
T ss_dssp EEECTTSSEEEEEE-------EETTEEEEEEE
T ss_pred eEECCCCCEEEEEE-------CCCCceEEEEE
Confidence 78999999888766 67788999985
No 154
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.92 E-value=5.4e-08 Score=59.66 Aligned_cols=89 Identities=3% Similarity=-0.068 Sum_probs=65.7
Q ss_pred eeeecCCCCceee-eeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCC
Q psy8803 8 YKRLDYHTPIVET-EVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDT 86 (111)
Q Consensus 8 ~i~iw~~~~~~~~-~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 86 (111)
.+.+||..+++.. ..+..+...+..++|+|+++.++.+ ++.+.+||+.+.+.... +. .. ..+..++|+|++.
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~---~~-~~-~~~~~~~~s~dg~ 292 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKR---VP-LP-HSYYSVNVSTDGS 292 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEE---EE-CS-SCCCEEEECTTSC
T ss_pred ceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcce---ec-CC-CceeeEEECCCCC
Confidence 5789999887653 3344566778899999999988888 68999999988765442 11 11 2345789999998
Q ss_pred EEEEeccccCCccccCceEEEeecC
Q psy8803 87 LLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.++++ +.++.|.+||++
T Consensus 293 ~l~~~--------~~~~~i~v~d~~ 309 (337)
T 1pby_B 293 TVWLG--------GALGDLAAYDAE 309 (337)
T ss_dssp EEEEE--------SBSSEEEEEETT
T ss_pred EEEEE--------cCCCcEEEEECc
Confidence 87664 457889999974
No 155
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.89 E-value=1e-08 Score=67.86 Aligned_cols=91 Identities=8% Similarity=-0.126 Sum_probs=62.3
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCC----CeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKD----GYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
.++.+.+||+.+++...... +.. ..+.|+|||+.|+.++.+ ..|++||+.++........ ......++
T Consensus 130 ~~~~~~l~d~~~g~~~~l~~-~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~-----~~~~~~~~ 201 (582)
T 3o4h_A 130 TEDRVALYALDGGGLRELAR-LPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSG-----EGSFSSAS 201 (582)
T ss_dssp CSSCEEEEEEETTEEEEEEE-ESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCS-----SCEEEEEE
T ss_pred CCCCceEEEccCCcEEEeec-CCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecC-----CCccccce
Confidence 34445599998776544333 333 788999999999987766 7899999887654331111 12345789
Q ss_pred EccCCCEEEEeccccCCccccCc--eEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSG--EIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~--~i~iw~~~ 111 (111)
|+|++..++ ++ ..++ .|.+||++
T Consensus 202 ~SpDG~~l~-~~-------~~~~~~~i~~~d~~ 226 (582)
T 3o4h_A 202 ISPGMKVTA-GL-------ETAREARLVTVDPR 226 (582)
T ss_dssp ECTTSCEEE-EE-------ECSSCEEEEEECTT
T ss_pred ECCCCCEEE-Ec-------cCCCeeEEEEEcCC
Confidence 999999987 43 4455 79999863
No 156
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.85 E-value=1.4e-08 Score=71.39 Aligned_cols=86 Identities=12% Similarity=-0.098 Sum_probs=65.2
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCC----------eEEEEecCCCceeeeecceeee
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDG----------YILVWTSSYPSKVKYSHDMKTF 71 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~----------~i~iw~~~~~~~~~~~~~~~~~ 71 (111)
++..++.+++||+.+++....+.+|...+..++|+|||++|+.++.++ .+++||+.++..... ...
T Consensus 395 ~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l----~~~ 470 (1045)
T 1k32_A 395 VANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA----TTE 470 (1045)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEEC----SCS
T ss_pred EECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEe----eCC
Confidence 356788999999998887777778999999999999999998887644 899999987653321 111
Q ss_pred ecCceeeEEEccCCCEEEEec
Q psy8803 72 SWKYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 72 ~~~~~~~v~~~~~~~~~~~~~ 92 (111)
......++|+|++..++...
T Consensus 471 -~~~~~~~~~spdG~~l~~~s 490 (1045)
T 1k32_A 471 -NSHDYAPAFDADSKNLYYLS 490 (1045)
T ss_dssp -SSBEEEEEECTTSCEEEEEE
T ss_pred -CcccCCceEcCCCCEEEEEe
Confidence 12344678999999887654
No 157
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.80 E-value=9.8e-09 Score=69.90 Aligned_cols=91 Identities=12% Similarity=0.031 Sum_probs=67.1
Q ss_pred cCeeeecCCCCceeeeeeeccccc-----EEEEEEcCCCcEEEEEeCC---------CeEEEEecCCCceeeeecceeee
Q psy8803 6 EEYKRLDYHTPIVETEVLTQHTHQ-----VLHVSFSHNGRYFATCSKD---------GYILVWTSSYPSKVKYSHDMKTF 71 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~~~~~-----v~~i~~s~~~~~l~s~~~d---------~~i~iw~~~~~~~~~~~~~~~~~ 71 (111)
|++|++||+.+++....+.+|... .....|||||+.|+.++.+ +.+.+||+.+++... +...
T Consensus 35 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~----l~~~ 110 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT----EERI 110 (740)
T ss_dssp TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC----SSCC
T ss_pred CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE----cccC
Confidence 899999999999877777776533 2347889999999988865 556799999876543 1111
Q ss_pred ecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 72 SWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 72 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
. ......+|+|++..|+.+ .++.|.+||+
T Consensus 111 ~-~~~~~~~~SPdG~~la~~---------~~~~i~~~~~ 139 (740)
T 4a5s_A 111 P-NNTQWVTWSPVGHKLAYV---------WNNDIYVKIE 139 (740)
T ss_dssp C-TTEEEEEECSSTTCEEEE---------ETTEEEEESS
T ss_pred C-CcceeeEECCCCCEEEEE---------ECCeEEEEEC
Confidence 1 345678899999988774 3677888875
No 158
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.78 E-value=7.7e-08 Score=65.15 Aligned_cols=85 Identities=11% Similarity=-0.000 Sum_probs=60.7
Q ss_pred CeeeecCCCCce--eeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeeccee-ee-----------e
Q psy8803 7 EYKRLDYHTPIV--ETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMK-TF-----------S 72 (111)
Q Consensus 7 ~~i~iw~~~~~~--~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~-~~-----------~ 72 (111)
+.|.+||+..+. ....+..|...+..++|+|||+.|+.++. +.|.+||+.++........-. .+ .
T Consensus 129 ~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~ 207 (741)
T 2ecf_A 129 GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEE 207 (741)
T ss_dssp TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHH
T ss_pred CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCccceeccccceeeeec
Confidence 789999998773 45567778889999999999999999884 599999998765443111000 00 0
Q ss_pred cCceeeEEEccCCCEEEEec
Q psy8803 73 WKYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 73 ~~~~~~v~~~~~~~~~~~~~ 92 (111)
......++|+|++..|+++.
T Consensus 208 ~~~~~~~~~SpDg~~l~~~~ 227 (741)
T 2ecf_A 208 MDRHTGYWWAPDDSAIAYAR 227 (741)
T ss_dssp SCCCCSEEECTTSSCEEEEE
T ss_pred cccccceEECCCCCEEEEEE
Confidence 01135789999999887765
No 159
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.78 E-value=2.3e-08 Score=67.49 Aligned_cols=88 Identities=10% Similarity=0.074 Sum_probs=59.5
Q ss_pred ccCeeeecCCCCceeeeee---ecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeee----cce-ee-e-e--
Q psy8803 5 YEEYKRLDYHTPIVETEVL---TQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYS----HDM-KT-F-S-- 72 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~---~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~----~~~-~~-~-~-- 72 (111)
+++.+.+||+.+++. ..+ .+|...+..++|||||+.|+.++. +.|++|++.++...... ..+ .. + .
T Consensus 89 ~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v 166 (723)
T 1xfd_A 89 YTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWL 166 (723)
T ss_dssp CCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHH
T ss_pred ceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECccccee
Confidence 458899999998765 233 345555889999999999999886 79999999876543311 111 00 0 0
Q ss_pred -----cCceeeEEEccCCCEEEEeccc
Q psy8803 73 -----WKYTQYSQFNESDTLLLVSGVH 94 (111)
Q Consensus 73 -----~~~~~~v~~~~~~~~~~~~~~~ 94 (111)
......++|+|++..|+.+..+
T Consensus 167 ~~ee~~~~~~~~~~SpDg~~la~~~~~ 193 (723)
T 1xfd_A 167 YEEEILKTHIAHWWSPDGTRLAYAAIN 193 (723)
T ss_dssp HHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred EEEEeccCcceEEECCCCCEEEEEEEC
Confidence 0122578999999988776533
No 160
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.76 E-value=7.7e-08 Score=64.87 Aligned_cols=103 Identities=10% Similarity=0.056 Sum_probs=67.2
Q ss_pred cccCeeeecCCCC-----ceeeeeeeccccc--------------EEEEEEcCCCcEEEEEe------------------
Q psy8803 4 WYEEYKRLDYHTP-----IVETEVLTQHTHQ--------------VLHVSFSHNGRYFATCS------------------ 46 (111)
Q Consensus 4 ~~d~~i~iw~~~~-----~~~~~~~~~~~~~--------------v~~i~~s~~~~~l~s~~------------------ 46 (111)
..|+.|.+|++.+ ++.......+... +..+.|+|||+.|+.++
T Consensus 138 ~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~ 217 (706)
T 2z3z_A 138 VRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLE 217 (706)
T ss_dssp EETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSS
T ss_pred EECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCC
Confidence 3578999999987 7655444333332 47899999999999887
Q ss_pred ---------------CCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 47 ---------------KDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 47 ---------------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.+..+.+||+.++........ ...-..+..++|+|++..+++...+.. .....|.+||++
T Consensus 218 ~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~--~~~~~~~~~~~~spdg~~l~~~~~~~~---~~~~~v~~~d~~ 292 (706)
T 2z3z_A 218 AESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTG--EPKEKFLTNLSWSPDENILYVAEVNRA---QNECKVNAYDAE 292 (706)
T ss_dssp CEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCC--SCTTCEEEEEEECTTSSEEEEEEECTT---SCEEEEEEEETT
T ss_pred CceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccC--CCCceeEeeEEEECCCCEEEEEEeCCC---CCeeEEEEEECC
Confidence 446799999987664431100 001124567899999998876541111 123578999863
No 161
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.75 E-value=3.2e-08 Score=61.02 Aligned_cols=95 Identities=9% Similarity=-0.028 Sum_probs=63.4
Q ss_pred ccccCeeeecCCCCceeeeeeecc------cccEEEEEEcCCCcEEEEEeCC------------CeEEEEecCCCceeee
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQH------THQVLHVSFSHNGRYFATCSKD------------GYILVWTSSYPSKVKY 64 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~------~~~v~~i~~s~~~~~l~s~~~d------------~~i~iw~~~~~~~~~~ 64 (111)
+..++.|.+||+.+++.+..+... ...+..+.|+|+++.++.++.+ +.+.+||+.++.....
T Consensus 61 ~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~ 140 (349)
T 1jmx_B 61 NNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP 140 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCC
T ss_pred eCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccce
Confidence 346789999999988877666532 2337789999999998888755 8999999986432210
Q ss_pred ecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 65 SHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 65 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.. .... ...+..++|+|++. +++.+ +.|.+||+
T Consensus 141 ~~-~~~~-~~~~~~~~~s~dg~-l~~~~----------~~i~~~d~ 173 (349)
T 1jmx_B 141 VR-TFPM-PRQVYLMRAADDGS-LYVAG----------PDIYKMDV 173 (349)
T ss_dssp SE-EEEC-CSSCCCEEECTTSC-EEEES----------SSEEEECT
T ss_pred ee-eccC-CCcccceeECCCCc-EEEcc----------CcEEEEeC
Confidence 00 0000 01345678999988 55532 22888886
No 162
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.74 E-value=1.1e-07 Score=64.08 Aligned_cols=98 Identities=6% Similarity=-0.025 Sum_probs=65.1
Q ss_pred ccCeeeecCCCCceeeeeee--cccccEEEEEEcCCCcEEEEEeCCC-----eEEEEecCCCceeeeecceeeeec-Cce
Q psy8803 5 YEEYKRLDYHTPIVETEVLT--QHTHQVLHVSFSHNGRYFATCSKDG-----YILVWTSSYPSKVKYSHDMKTFSW-KYT 76 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~--~~~~~v~~i~~s~~~~~l~s~~~d~-----~i~iw~~~~~~~~~~~~~~~~~~~-~~~ 76 (111)
.+..|.+||+.+++...... .|...+..++|+||++.|+.++.++ .+.+||+.++.............| ...
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 45789999999887544332 4677899999999999998887665 899999988732221000000011 123
Q ss_pred eeEEEcc--CCCEEEEeccccCCccccCceEEEeec
Q psy8803 77 QYSQFNE--SDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 77 ~~v~~~~--~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
..++|+| ++..+ .++ ..++.+++|++
T Consensus 313 ~~~~~sp~~dg~~l-~~~-------~~~g~~~l~~~ 340 (706)
T 2z3z_A 313 HPLTFLPGSNNQFI-WQS-------RRDGWNHLYLY 340 (706)
T ss_dssp SCCEECTTCSSEEE-EEE-------CTTSSCEEEEE
T ss_pred CCceeecCCCCEEE-EEE-------ccCCccEEEEE
Confidence 5678999 77654 444 55677888864
No 163
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.71 E-value=6.8e-07 Score=59.70 Aligned_cols=95 Identities=15% Similarity=0.067 Sum_probs=72.0
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecC--CCceeeeecceeeeecCceeeEE
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSS--YPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
...+++|.++|..+++.+..+.. ...+..+.|+||++++..++.++.+.+||+. +.+... .+... .....++
T Consensus 173 ~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~---~i~~G--~~P~~ia 246 (567)
T 1qks_A 173 LRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA---EIKIG--SEARSIE 246 (567)
T ss_dssp ETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEE---EEECC--SEEEEEE
T ss_pred eCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeE---EEecC--CCCceeE
Confidence 34678999999999988877763 3356689999999999999999999999995 554443 22211 2346789
Q ss_pred Ec----cCCCEEEEeccccCCccccCceEEEeec
Q psy8803 81 FN----ESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 81 ~~----~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
|+ |++.+++++. -.++.|.|+|.
T Consensus 247 ~s~~~~pDGk~l~v~n-------~~~~~v~ViD~ 273 (567)
T 1qks_A 247 TSKMEGWEDKYAIAGA-------YWPPQYVIMDG 273 (567)
T ss_dssp ECCSTTCTTTEEEEEE-------EETTEEEEEET
T ss_pred EccccCCCCCEEEEEE-------ccCCeEEEEEC
Confidence 99 6888888876 56778888884
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.69 E-value=8.1e-07 Score=55.77 Aligned_cols=104 Identities=13% Similarity=0.055 Sum_probs=62.8
Q ss_pred ccCeeeecCCC-Cceee--eeee--cccccEEEEEEcCCCcEEEEEeC-CCeEEEEecC--CCceeeeecceeeee--c-
Q psy8803 5 YEEYKRLDYHT-PIVET--EVLT--QHTHQVLHVSFSHNGRYFATCSK-DGYILVWTSS--YPSKVKYSHDMKTFS--W- 73 (111)
Q Consensus 5 ~d~~i~iw~~~-~~~~~--~~~~--~~~~~v~~i~~s~~~~~l~s~~~-d~~i~iw~~~--~~~~~~~~~~~~~~~--~- 73 (111)
.++.|.+|++. +++.. ..+. .|...+..++|+|||+.++.++. ++.+.+|++. ++........+..+. +
T Consensus 165 ~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 244 (365)
T 1jof_A 165 TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIP 244 (365)
T ss_dssp TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCC
T ss_pred CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcC
Confidence 36789999998 56532 2333 23567899999999998877764 6799999875 343221000011110 0
Q ss_pred --C-------ceeeEE-EccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 74 --K-------YTQYSQ-FNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 74 --~-------~~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
. ....++ |+|++..++++...... ...+.|.+|++
T Consensus 245 g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~--~~~~~i~v~~~ 289 (365)
T 1jof_A 245 DRDPETGKGLYRADVCALTFSGKYMFASSRANKF--ELQGYIAGFKL 289 (365)
T ss_dssp CBCTTTSSBSEEEEEEEECTTSSEEEEEEEESST--TSCCEEEEEEE
T ss_pred CcccccccccccccEEEECCCCCEEEEECCCCCC--CCCCeEEEEEE
Confidence 1 356789 99999988765511000 00127999986
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.66 E-value=1e-06 Score=53.33 Aligned_cols=94 Identities=6% Similarity=0.030 Sum_probs=62.9
Q ss_pred cccCeeeecCCCCceeeeeeecc--cccEEEEEEcCCCcEEEEEeCCC-eEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQH--THQVLHVSFSHNGRYFATCSKDG-YILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~--~~~v~~i~~s~~~~~l~s~~~d~-~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
..++.|++||.. ++.+..+..+ ......++++++++++++...++ .|.+|+........... ......+..++
T Consensus 182 ~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~---~~~~~~~~~i~ 257 (286)
T 1q7f_A 182 NRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALES---KVKHAQCFDVA 257 (286)
T ss_dssp GGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEE---SSCCSCEEEEE
T ss_pred CCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcc---cCCCCcceeEE
Confidence 457889999975 5555555433 36788999999999999888775 99999965432221110 01112245788
Q ss_pred EccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 81 FNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
++|++..+++ . .++.|++|++
T Consensus 258 ~~~~g~l~vs-~--------~~~~v~v~~~ 278 (286)
T 1q7f_A 258 LMDDGSVVLA-S--------KDYRLYIYRY 278 (286)
T ss_dssp EETTTEEEEE-E--------TTTEEEEEEC
T ss_pred ECCCCcEEEE-C--------CCCeEEEEEc
Confidence 9998865444 3 4788999986
No 166
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.65 E-value=2e-07 Score=63.03 Aligned_cols=86 Identities=8% Similarity=-0.036 Sum_probs=58.3
Q ss_pred ccCeeeecCCCCceee--eeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeee--c---ceeeee-----
Q psy8803 5 YEEYKRLDYHTPIVET--EVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYS--H---DMKTFS----- 72 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~--~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~--~---~~~~~~----- 72 (111)
.|+.+++||+.+++.+ ..+ ...+..++|||||+.|+.+. ++.|++|++.++...... . .+....
T Consensus 88 ~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~ 163 (719)
T 1z68_A 88 YTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVY 163 (719)
T ss_dssp EEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHH
T ss_pred cceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEccccccee
Confidence 3789999999988763 222 24678899999999999886 679999999876543311 0 011000
Q ss_pred ----cCceeeEEEccCCCEEEEeccc
Q psy8803 73 ----WKYTQYSQFNESDTLLLVSGVH 94 (111)
Q Consensus 73 ----~~~~~~v~~~~~~~~~~~~~~~ 94 (111)
+.....++|+|++..|+....+
T Consensus 164 ~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 164 EEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp HHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred eeecccCcccEEECCCCCEEEEEEEC
Confidence 0111478999999998776533
No 167
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.63 E-value=5.6e-07 Score=57.55 Aligned_cols=86 Identities=9% Similarity=-0.013 Sum_probs=63.0
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
.++.|++||+.+......+..|...+..+.+.+. .++.+..||.+.+||+.......... .+++++|+|.
T Consensus 104 ~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~~~~--------~Vs~v~WSpk 173 (388)
T 1xip_A 104 TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQ--------NVTSFDVTNS 173 (388)
T ss_dssp ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEE--------SEEEEEECSS
T ss_pred cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccccccC--------CceEEEEcCC
Confidence 6799999999876655566667778888877653 38888999999999999766554322 3456677778
Q ss_pred CCEEEEeccccCCccccCceEEEeec
Q psy8803 85 DTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+ . +.| ..++.+++|+.
T Consensus 174 G-~--~vg-------~~dg~i~~~~~ 189 (388)
T 1xip_A 174 Q-L--AVL-------LKDRSFQSFAW 189 (388)
T ss_dssp E-E--EEE-------ETTSCEEEEEE
T ss_pred c-e--EEE-------EcCCcEEEEcC
Confidence 7 3 333 56888998863
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.56 E-value=2.8e-07 Score=62.87 Aligned_cols=84 Identities=10% Similarity=-0.011 Sum_probs=58.6
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeee--c---ceee-ee--------
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYS--H---DMKT-FS-------- 72 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~--~---~~~~-~~-------- 72 (111)
+.+.+||+.+++.. .+..|.+.+...+|||||+.|+.+. ++.|++|+..++...... . .+.. ..
T Consensus 92 ~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~ 169 (740)
T 4a5s_A 92 ASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEV 169 (740)
T ss_dssp EEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHT
T ss_pred eEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchh
Confidence 56679999988754 4667788899999999999998885 679999999876543311 0 0110 00
Q ss_pred cCceeeEEEccCCCEEEEec
Q psy8803 73 WKYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 73 ~~~~~~v~~~~~~~~~~~~~ 92 (111)
+.....++|+|++..|+...
T Consensus 170 ~~~~~~~~wSpDg~~la~~~ 189 (740)
T 4a5s_A 170 FSAYSALWWSPNGTFLAYAQ 189 (740)
T ss_dssp SSSSBCEEECTTSSEEEEEE
T ss_pred cCCCcceEECCCCCEEEEEE
Confidence 11223578999999887764
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.53 E-value=4.9e-07 Score=56.09 Aligned_cols=97 Identities=10% Similarity=0.032 Sum_probs=67.5
Q ss_pred cccCeeeecCCCCceeeeeee--cccccEEEEEEcCCCcEEEEE-------eCCCeEEEEecCCCceeeeecceeeeecC
Q psy8803 4 WYEEYKRLDYHTPIVETEVLT--QHTHQVLHVSFSHNGRYFATC-------SKDGYILVWTSSYPSKVKYSHDMKTFSWK 74 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~i~~s~~~~~l~s~-------~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 74 (111)
..++.|++|+..+++.+..+. .+...+..++|+| +..++.. ..+..+++|+..++......... .....
T Consensus 215 ~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~-~~~~~ 292 (329)
T 3fvz_A 215 RENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPV-RKHFD 292 (329)
T ss_dssp TTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCS-SSCCS
T ss_pred CCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCC-CCccC
Confidence 457789999998888777774 4566788999999 4444443 34458999999887665532111 11224
Q ss_pred ceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 75 YTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.+..++++|++ .++++. ..++.|++|++
T Consensus 293 ~p~~ia~~~dG-~lyvad-------~~~~~I~~~~~ 320 (329)
T 3fvz_A 293 MPHDIVASEDG-TVYIGD-------AHTNTVWKFTL 320 (329)
T ss_dssp SEEEEEECTTS-EEEEEE-------SSSCCEEEEEE
T ss_pred CeeEEEECCCC-CEEEEE-------CCCCEEEEEeC
Confidence 56789999988 666766 67888999986
No 170
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.48 E-value=4.4e-06 Score=51.65 Aligned_cols=77 Identities=18% Similarity=0.157 Sum_probs=52.5
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCC---C--eEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKD---G--YILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d---~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
+++.+.+||+..++.. .+ ..+..+.|+|||+.|+..+.+ + .|.+|++..++.... .... . +..+
T Consensus 41 ~~~~l~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l----~~~~-~-~~~~ 109 (347)
T 2gop_A 41 YENTIVIENLKNNARR-FI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKI----LEAK-N-IRSL 109 (347)
T ss_dssp EEEEEEEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEE----EEES-E-EEEE
T ss_pred ccceEEEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEE----EcCC-C-ccce
Confidence 4678889998876543 33 467889999999988877643 3 377777776554331 1111 1 4567
Q ss_pred EEccCCCEEEEec
Q psy8803 80 QFNESDTLLLVSG 92 (111)
Q Consensus 80 ~~~~~~~~~~~~~ 92 (111)
+|+|++..++.+.
T Consensus 110 ~wspdg~~l~~~~ 122 (347)
T 2gop_A 110 EWNEDSRKLLIVG 122 (347)
T ss_dssp EECTTSSEEEEEE
T ss_pred eECCCCCEEEEEE
Confidence 8999999887765
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.48 E-value=9.2e-06 Score=50.36 Aligned_cols=99 Identities=14% Similarity=0.023 Sum_probs=66.0
Q ss_pred cccCeeeecCCCCce-eeeee---------ecccccEEEEEEcC-CCcEEEEEe-CCCeEEEEecCCCceeeeeccee--
Q psy8803 4 WYEEYKRLDYHTPIV-ETEVL---------TQHTHQVLHVSFSH-NGRYFATCS-KDGYILVWTSSYPSKVKYSHDMK-- 69 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~-~~~~~---------~~~~~~v~~i~~s~-~~~~l~s~~-~d~~i~iw~~~~~~~~~~~~~~~-- 69 (111)
..++.|++|+..... .+..+ .++......++++| +++++++.+ .++.|.+|+... ..........
T Consensus 109 ~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g-~~~~~~~~~g~~ 187 (329)
T 3fvz_A 109 VALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSG-KFVTQWGEESSG 187 (329)
T ss_dssp TTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTS-CEEEEECEECCS
T ss_pred CCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCC-CEEEEeccCCCC
Confidence 456789999976432 44444 23445688999999 799999886 689999999543 3322110000
Q ss_pred ----eeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 70 ----TFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 70 ----~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
...+.....++++|+...++++. ..++.|++||.
T Consensus 188 ~~~~~~~~~~p~gia~d~~~g~l~v~d-------~~~~~I~~~~~ 225 (329)
T 3fvz_A 188 SSPRPGQFSVPHSLALVPHLDQLCVAD-------RENGRIQCFKT 225 (329)
T ss_dssp SSCCTTEESCEEEEEEETTTTEEEEEE-------TTTTEEEEEET
T ss_pred CCCCCcccCCCcEEEEECCCCEEEEEE-------CCCCEEEEEEC
Confidence 01123467899999866777776 67788999986
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.43 E-value=2.6e-06 Score=53.72 Aligned_cols=74 Identities=11% Similarity=0.095 Sum_probs=57.0
Q ss_pred cCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCC--ceeeeecceeeeecCceeeEEEcc
Q psy8803 6 EEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYP--SKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
...|.+||..+++.+..+..+. ...+.|+|||+.|++++. +.+.+||..++ +.......+ . .....++++|
T Consensus 285 ~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~---G-~~P~~~~~~p 357 (361)
T 2oiz_A 285 AAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGA---A-EASLQVQFHP 357 (361)
T ss_dssp CSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTS---C-SSEEEEEECC
T ss_pred CceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccC---C-CCcEEEEecC
Confidence 3589999999999999988776 899999999999888887 89999999988 655431111 1 3345677777
Q ss_pred CCC
Q psy8803 84 SDT 86 (111)
Q Consensus 84 ~~~ 86 (111)
++.
T Consensus 358 ~G~ 360 (361)
T 2oiz_A 358 VGG 360 (361)
T ss_dssp CSC
T ss_pred CCC
Confidence 764
No 173
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.42 E-value=3.2e-06 Score=52.96 Aligned_cols=90 Identities=11% Similarity=0.069 Sum_probs=61.1
Q ss_pred eecCCCCceeeeeeecccccEEE-----EEEcCCCcEEEEEeC-CC--eEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 10 RLDYHTPIVETEVLTQHTHQVLH-----VSFSHNGRYFATCSK-DG--YILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 10 ~iw~~~~~~~~~~~~~~~~~v~~-----i~~s~~~~~l~s~~~-d~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
...|..++..+..+..|...... .+|+|||+.|+..+. ++ .|.+||+.++........ ........+|
T Consensus 13 ~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~----~~~~~~~~~~ 88 (388)
T 3pe7_A 13 TYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEG----RGDNTFGGFL 88 (388)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCS----SCBCSSSCEE
T ss_pred EEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeC----CCCCccceEE
Confidence 34566778888888877766665 789999998888876 66 478888887665442111 0011224578
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
+|++..|+... .++.|.+||++
T Consensus 89 spdg~~l~~~~--------~~~~l~~~d~~ 110 (388)
T 3pe7_A 89 SPDDDALFYVK--------DGRNLMRVDLA 110 (388)
T ss_dssp CTTSSEEEEEE--------TTTEEEEEETT
T ss_pred cCCCCEEEEEe--------CCCeEEEEECC
Confidence 99999887654 45678888863
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.39 E-value=6.4e-06 Score=55.23 Aligned_cols=93 Identities=8% Similarity=0.078 Sum_probs=59.7
Q ss_pred CeeeecCCC-Cc---eeeeeeecccccEEEEEEcCCCcEEEEEeCCC--eEEEEecCCCceee---eecceeeeecCc-e
Q psy8803 7 EYKRLDYHT-PI---VETEVLTQHTHQVLHVSFSHNGRYFATCSKDG--YILVWTSSYPSKVK---YSHDMKTFSWKY-T 76 (111)
Q Consensus 7 ~~i~iw~~~-~~---~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~--~i~iw~~~~~~~~~---~~~~~~~~~~~~-~ 76 (111)
..|.+||+. ++ +......+|...+..+.|+|||++++++..++ .|.+|+..++.... +...+....|.+ .
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~ 296 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGM 296 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTC
T ss_pred cEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccC
Confidence 479999998 56 43333345578899999999999888888888 56666665544332 111222223333 4
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEe
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVF 108 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw 108 (111)
..++|+|++..++. + .. +.+++|
T Consensus 297 ~~~~~~~~~~~~~~-~-------~~-~~~~l~ 319 (662)
T 3azo_A 297 RWFAPLANGLIAVV-H-------GK-GAAVLG 319 (662)
T ss_dssp CSEEECTTSCEEEE-E-------BS-SSCEEE
T ss_pred ceEeEeCCCEEEEE-E-------Ec-CccEEE
Confidence 56888888776554 3 33 667777
No 175
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.39 E-value=1e-05 Score=49.30 Aligned_cols=84 Identities=6% Similarity=-0.191 Sum_probs=58.2
Q ss_pred cccccCeeeecCCCCceeeeeeeccc-ccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHT-HQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQ 80 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~-~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (111)
+.+.|+.|.+||..+++.+..+..+. ..+..+.++|+|++|++ .+..+..||. +++..-.... .....+..++
T Consensus 10 ~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~---~~~~~~~~~~ 83 (276)
T 3no2_A 10 GGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRELWNIAA---PAGCEMQTAR 83 (276)
T ss_dssp ECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEEEEC---CTTCEEEEEE
T ss_pred eeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEEEcC---CCCccccccE
Confidence 46789999999998999998888765 47888999999999983 4678999998 5543321100 0001234556
Q ss_pred EccCCCEEEEe
Q psy8803 81 FNESDTLLLVS 91 (111)
Q Consensus 81 ~~~~~~~~~~~ 91 (111)
+.+++..+++.
T Consensus 84 ~~~dG~~lv~~ 94 (276)
T 3no2_A 84 ILPDGNALVAW 94 (276)
T ss_dssp ECTTSCEEEEE
T ss_pred ECCCCCEEEEe
Confidence 67777766553
No 176
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.36 E-value=1.7e-05 Score=47.38 Aligned_cols=96 Identities=4% Similarity=-0.037 Sum_probs=65.3
Q ss_pred cccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEcc
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
..++.|.+|+............+...+..++++++|.++++...++.|.+|+......... .. .....+..+++.+
T Consensus 168 ~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~--~~--~~~~~p~~i~~~~ 243 (270)
T 1rwi_B 168 TDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVL--PF--TGLNTPLAVAVDS 243 (270)
T ss_dssp GGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEEC--CC--CSCSCEEEEEECT
T ss_pred CCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceee--cc--CCCCCceeEEECC
Confidence 3457888888876554333233336788999999999888888888999999876433221 00 1113456788998
Q ss_pred CCCEEEEeccccCCccccCceEEEeecC
Q psy8803 84 SDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
++. ++++. ..++.|+++++.
T Consensus 244 ~g~-l~v~~-------~~~~~v~~~~~~ 263 (270)
T 1rwi_B 244 DRT-VYVAD-------RGNDRVVKLTSL 263 (270)
T ss_dssp TCC-EEEEE-------GGGTEEEEECCC
T ss_pred CCC-EEEEE-------CCCCEEEEEcCC
Confidence 886 55555 678889998863
No 177
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.36 E-value=2.4e-06 Score=57.27 Aligned_cols=102 Identities=5% Similarity=-0.077 Sum_probs=61.9
Q ss_pred cCeeeecCCC-Cc-eeeeeeec-----ccccEEEEEEcCCCcEEEEEeCC----------CeEEEEecCC------Ccee
Q psy8803 6 EEYKRLDYHT-PI-VETEVLTQ-----HTHQVLHVSFSHNGRYFATCSKD----------GYILVWTSSY------PSKV 62 (111)
Q Consensus 6 d~~i~iw~~~-~~-~~~~~~~~-----~~~~v~~i~~s~~~~~l~s~~~d----------~~i~iw~~~~------~~~~ 62 (111)
+..|.++++. ++ .....+.. |...+..++|+|||+.|+.++.+ ..|.+|++.. +...
T Consensus 101 ~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 180 (662)
T 3azo_A 101 DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR 180 (662)
T ss_dssp TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE
T ss_pred CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee
Confidence 3445555554 01 33445555 66788999999999999988876 5799999987 4332
Q ss_pred eeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 63 KYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 63 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.... .. ......++|+|++..|+.+..+.....-....|.+||+.
T Consensus 181 ~l~~---~~-~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~ 225 (662)
T 3azo_A 181 ELSD---DA-HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVT 225 (662)
T ss_dssp ESSC---SC-SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEEC
T ss_pred EEEe---cC-CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEEC
Confidence 2110 10 123446789999998876552221100013578888863
No 178
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.36 E-value=2.4e-05 Score=47.19 Aligned_cols=93 Identities=10% Similarity=0.092 Sum_probs=63.3
Q ss_pred cCeeeecCCCCceeeeeee-cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 6 EEYKRLDYHTPIVETEVLT-QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~-~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
++.|.+|| ..++.+..+. .+...+..++++++++++++...++.|.+|+............ .....+..++++|+
T Consensus 99 ~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~---~~~~~p~~i~~~~~ 174 (286)
T 1q7f_A 99 THQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCS---KHLEFPNGVVVNDK 174 (286)
T ss_dssp GCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECT---TTCSSEEEEEECSS
T ss_pred CCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCC---CccCCcEEEEECCC
Confidence 78899999 4466665554 3445789999999999998888889999999754322211100 01134567889988
Q ss_pred CCEEEEeccccCCccccCceEEEeec
Q psy8803 85 DTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+. ++++. ..++.|.+||.
T Consensus 175 g~-l~v~~-------~~~~~i~~~~~ 192 (286)
T 1q7f_A 175 QE-IFISD-------NRAHCVKVFNY 192 (286)
T ss_dssp SE-EEEEE-------GGGTEEEEEET
T ss_pred CC-EEEEE-------CCCCEEEEEcC
Confidence 76 45554 55778999875
No 179
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.34 E-value=1.3e-05 Score=48.75 Aligned_cols=86 Identities=5% Similarity=-0.112 Sum_probs=60.4
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEc
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFN 82 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 82 (111)
+..++.|..|+...+ ...+..+...+..++++++++++++...++.|.+||..++................++.+++.
T Consensus 46 ~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d 123 (296)
T 3e5z_A 46 DVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLA 123 (296)
T ss_dssp EGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEEC
T ss_pred eCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEEC
Confidence 456788999998876 555666778899999999999988887778999999976654332111111112345678899
Q ss_pred cCCCEEEE
Q psy8803 83 ESDTLLLV 90 (111)
Q Consensus 83 ~~~~~~~~ 90 (111)
|++..+++
T Consensus 124 ~~G~l~vt 131 (296)
T 3e5z_A 124 PDGSLWFS 131 (296)
T ss_dssp TTSCEEEE
T ss_pred CCCCEEEE
Confidence 98876543
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.33 E-value=6.2e-05 Score=46.32 Aligned_cols=86 Identities=13% Similarity=0.089 Sum_probs=59.0
Q ss_pred cccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCC----CeEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKD----GYILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
..++.|.+||...++.......+...+.+++++++++++++...+ +.|.+||.............. ....++.+
T Consensus 63 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~i 140 (333)
T 2dg1_A 63 VFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLS--TAYCIDDM 140 (333)
T ss_dssp TTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSS--SCCCEEEE
T ss_pred CCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCc--cCCcccce
Confidence 457889999988776554443466789999999999988887766 689999988765432111010 11345678
Q ss_pred EEccCCCEEEEe
Q psy8803 80 QFNESDTLLLVS 91 (111)
Q Consensus 80 ~~~~~~~~~~~~ 91 (111)
+++|++..+++.
T Consensus 141 ~~d~~g~l~v~~ 152 (333)
T 2dg1_A 141 VFDSKGGFYFTD 152 (333)
T ss_dssp EECTTSCEEEEE
T ss_pred EECCCCCEEEEe
Confidence 899988766543
No 181
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.32 E-value=2.7e-05 Score=47.94 Aligned_cols=96 Identities=11% Similarity=0.036 Sum_probs=62.8
Q ss_pred cccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEcc
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
..++.++.| .++....+..+...+..++|++++++++++..++.|.+||..+......... .-..+..++++|
T Consensus 24 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~----~~~~~~~i~~~~ 96 (333)
T 2dg1_A 24 ISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVS----HKANPAAIKIHK 96 (333)
T ss_dssp CCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEEC----SSSSEEEEEECT
T ss_pred eecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeC----CCCCcceEEECC
Confidence 346667777 3455566666777789999999999888888889999999987654432100 113456788898
Q ss_pred CCCEEEEeccccCCccccCceEEEeec
Q psy8803 84 SDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
++..+++...+. ...+.|.+||.
T Consensus 97 dg~l~v~~~~~~----~~~~~i~~~d~ 119 (333)
T 2dg1_A 97 DGRLFVCYLGDF----KSTGGIFAATE 119 (333)
T ss_dssp TSCEEEEECTTS----SSCCEEEEECT
T ss_pred CCcEEEEeCCCC----CCCceEEEEeC
Confidence 887655432000 01146777774
No 182
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.28 E-value=3.2e-05 Score=47.09 Aligned_cols=95 Identities=7% Similarity=0.017 Sum_probs=62.5
Q ss_pred ccCeeeecCCC-Cce-----eeeeeeccc-ccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCcee
Q psy8803 5 YEEYKRLDYHT-PIV-----ETEVLTQHT-HQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQ 77 (111)
Q Consensus 5 ~d~~i~iw~~~-~~~-----~~~~~~~~~-~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 77 (111)
.++.|.+|+.. .++ ....+.++. .....++++++|+++++...++.|.+||..++..... +. .....+.
T Consensus 196 ~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~---~~-~~~~~~~ 271 (314)
T 1pjx_A 196 PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMR---IR-CPFEKPS 271 (314)
T ss_dssp TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEE---EE-CSSSCEE
T ss_pred CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEE---Ee-CCCCCce
Confidence 35678888765 332 222333333 5678899999999999887788999999875443321 11 1113456
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.++|+|++..++++. ..++.|..+++
T Consensus 272 ~i~~~~dg~~l~v~~-------~~~~~l~~~~~ 297 (314)
T 1pjx_A 272 NLHFKPQTKTIFVTE-------HENNAVWKFEW 297 (314)
T ss_dssp EEEECTTSSEEEEEE-------TTTTEEEEEEC
T ss_pred eEEECCCCCEEEEEe-------CCCCeEEEEeC
Confidence 788998888676665 45567888875
No 183
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.27 E-value=3.6e-06 Score=53.84 Aligned_cols=53 Identities=8% Similarity=-0.118 Sum_probs=43.6
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCc
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPS 60 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~ 60 (111)
+...||.+.+||+..+.... +...|.+++|+|+| ++.+..|+++++|+.....
T Consensus 141 v~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~ 193 (388)
T 1xip_A 141 ILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGE 193 (388)
T ss_dssp EEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTE
T ss_pred EEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCcc
Confidence 34689999999999776543 45689999999999 6778889999999887655
No 184
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.26 E-value=2.5e-05 Score=48.95 Aligned_cols=55 Identities=7% Similarity=-0.089 Sum_probs=43.8
Q ss_pred eeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCcee
Q psy8803 8 YKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKV 62 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~ 62 (111)
.+.+||...++......++...+....|+||++.|+.++.++.+.+||+.+++..
T Consensus 61 ~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~ 115 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEEN 115 (388)
T ss_dssp EEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEE
T ss_pred eEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcce
Confidence 4777888888766655666656556789999999999998899999999886544
No 185
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.21 E-value=2.2e-05 Score=53.34 Aligned_cols=96 Identities=7% Similarity=-0.024 Sum_probs=61.6
Q ss_pred eeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCe----------------EEEEecCCCce---eeeecce
Q psy8803 8 YKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGY----------------ILVWTSSYPSK---VKYSHDM 68 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~----------------i~iw~~~~~~~---~~~~~~~ 68 (111)
.|++||+.+++.+.... ....+..++|+||++.|+.++.+.. |++|++.+... ......-
T Consensus 152 ~i~v~d~~tg~~~~~~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~ 230 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPD 230 (710)
T ss_dssp EEEEEETTTTEEEEEEE-EEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTT
T ss_pred EEEEEECCCCCCCcccc-cCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCC
Confidence 89999999887655322 2223677999999999888877655 99999976542 1111000
Q ss_pred eeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 69 KTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 69 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.-.....+.|+|++..++....... ..+..|.+||+
T Consensus 231 ---~~~~~~~~~~SpDg~~l~~~~~~~~---~~~~~l~~~d~ 266 (710)
T 2xdw_A 231 ---EPKWMGGAELSDDGRYVLLSIREGC---DPVNRLWYCDL 266 (710)
T ss_dssp ---CTTCEEEEEECTTSCEEEEEEECSS---SSCCEEEEEEG
T ss_pred ---CCeEEEEEEEcCCCCEEEEEEEccC---CCccEEEEEEC
Confidence 0012346788999998877652111 11567888886
No 186
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.20 E-value=4.9e-05 Score=47.18 Aligned_cols=98 Identities=10% Similarity=-0.060 Sum_probs=65.8
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceee--eecCceeeEE
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKT--FSWKYTQYSQ 80 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~--~~~~~~~~v~ 80 (111)
+..++.|.++|..+++.+..+. .......++++++++++++...++.+.++|..+.+...... +.. ........++
T Consensus 60 ~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~-~g~~~~~~~~p~~i~ 137 (328)
T 3dsm_A 60 VNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIE-CPDMDMESGSTEQMV 137 (328)
T ss_dssp EGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEE-CTTCCTTTCBCCCEE
T ss_pred EcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEE-cCCccccCCCcceEE
Confidence 3457899999999998888775 34677899999999777777678999999998876543210 000 0001233566
Q ss_pred EccCCCEEEEeccccCCccc-cCceEEEeecC
Q psy8803 81 FNESDTLLLVSGVHFGTPQS-TSGEIAVFSLQ 111 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~-~~~~i~iw~~~ 111 (111)
+ ++..++++. . .++.|.++|++
T Consensus 138 ~--~~~~lyv~~-------~~~~~~v~viD~~ 160 (328)
T 3dsm_A 138 Q--YGKYVYVNC-------WSYQNRILKIDTE 160 (328)
T ss_dssp E--ETTEEEEEE-------CTTCCEEEEEETT
T ss_pred E--ECCEEEEEc-------CCCCCEEEEEECC
Confidence 6 345555654 2 37789998863
No 187
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.14 E-value=4.6e-05 Score=48.80 Aligned_cols=98 Identities=12% Similarity=0.096 Sum_probs=66.9
Q ss_pred cCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEe----------CCCeEEEEecCCCceeeeec--c-eeeee
Q psy8803 6 EEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCS----------KDGYILVWTSSYPSKVKYSH--D-MKTFS 72 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~----------~d~~i~iw~~~~~~~~~~~~--~-~~~~~ 72 (111)
++.|.+.|..+++.+..+..-... .+.++||++.+..+. .+..+.+||..+.+...... . -+...
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~ 135 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLV 135 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CCEEEEEECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcccccc
Confidence 678999999999888887633333 499999998766554 35689999999877655210 0 00000
Q ss_pred cCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 73 WKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 73 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
......++|+|++.+++++. ...++.|.++|++
T Consensus 136 g~~P~~~a~spDGk~lyVan------~~~~~~VsVID~~ 168 (386)
T 3sjl_D 136 GTYPWMTSLTPDGKTLLFYQ------FSPAPAVGVVDLE 168 (386)
T ss_dssp SCCGGGEEECTTSSEEEEEE------CSSSCEEEEEETT
T ss_pred CCCCceEEEcCCCCEEEEEE------cCCCCeEEEEECC
Confidence 12345689999999988865 1236789999864
No 188
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.13 E-value=4.5e-05 Score=47.37 Aligned_cols=92 Identities=11% Similarity=0.000 Sum_probs=64.8
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCC----------CeEEEEecCCCceeeeecceeeeecC
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKD----------GYILVWTSSYPSKVKYSHDMKTFSWK 74 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d----------~~i~iw~~~~~~~~~~~~~~~~~~~~ 74 (111)
.++.|.++|..+++.+..+.. ......+.++|+|++++++..+ +.+.++|..+.+..... .+.. -.
T Consensus 150 ~~~~v~viD~~t~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~-~~~~--g~ 225 (328)
T 3dsm_A 150 YQNRILKIDTETDKVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQF-KFKL--GD 225 (328)
T ss_dssp TCCEEEEEETTTTEEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEE-ECCT--TC
T ss_pred CCCEEEEEECCCCeEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEE-ecCC--CC
Confidence 478999999998887776653 2345678899999988887654 78999999877654321 1110 12
Q ss_pred ceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 75 YTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
....++++|++..++++. . .|.++|+
T Consensus 226 ~p~~la~~~d~~~lyv~~-------~---~v~~~d~ 251 (328)
T 3dsm_A 226 WPSEVQLNGTRDTLYWIN-------N---DIWRMPV 251 (328)
T ss_dssp CCEEEEECTTSCEEEEES-------S---SEEEEET
T ss_pred CceeEEEecCCCEEEEEc-------c---EEEEEEC
Confidence 456789999888887754 2 6777775
No 189
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.03 E-value=0.00022 Score=45.32 Aligned_cols=93 Identities=11% Similarity=-0.026 Sum_probs=62.6
Q ss_pred eeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEe----------CCCeEEEEecCCCceeeeecc---eeeeecC
Q psy8803 8 YKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCS----------KDGYILVWTSSYPSKVKYSHD---MKTFSWK 74 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~----------~d~~i~iw~~~~~~~~~~~~~---~~~~~~~ 74 (111)
+|.++|..+++.+..+..-.. ..+.++||++.+..+. .+..+.++|..+.+......- .+.....
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~--p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~ 125 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFL--PNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGP 125 (373)
T ss_pred EEEEEECCCCeEEEEecCCCC--CCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCC
Confidence 889999998888777753322 3999999998877775 356899999987655442100 0000001
Q ss_pred ceeeEEEccCCCEEEEeccccCCcccc-CceEEEee
Q psy8803 75 YTQYSQFNESDTLLLVSGVHFGTPQST-SGEIAVFS 109 (111)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~i~iw~ 109 (111)
....++++|++..++++. .. ++.|.++|
T Consensus 126 ~p~~~~~spDG~~l~v~n-------~~~~~~v~viD 154 (373)
T 2mad_H 126 YSWMNANTPNNADLLFFQ-------FAAGPAVGLVV 154 (373)
T ss_pred CccceEECCCCCEEEEEe-------cCCCCeEEEEE
Confidence 234688999999988865 22 46688877
No 190
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.97 E-value=0.0002 Score=43.49 Aligned_cols=89 Identities=7% Similarity=-0.042 Sum_probs=54.0
Q ss_pred eeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecC-CCce-eeeecceeeeecCceeeEEEccCC
Q psy8803 8 YKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSS-YPSK-VKYSHDMKTFSWKYTQYSQFNESD 85 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~-~~~~-~~~~~~~~~~~~~~~~~v~~~~~~ 85 (111)
.|..++.. ++ +..+..+......++|+|+++.+++...++.|.+|++. .+.. ... ... ......+..+++.+++
T Consensus 154 ~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~-~~~-~~~~~~p~~i~~d~~G 229 (296)
T 3e5z_A 154 WVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQG-VHF-TVEPGKTDGLRVDAGG 229 (296)
T ss_dssp EEEEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEE-EEE-CCSSSCCCSEEEBTTS
T ss_pred EEEEECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCC-eEe-eCCCCCCCeEEECCCC
Confidence 34444433 33 33344556677899999999988777778899999986 3333 110 001 1112334578888888
Q ss_pred CEEEEeccccCCccccCceEEEeec
Q psy8803 86 TLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
...++ . ++.|.+||.
T Consensus 230 ~l~v~---------~-~~~v~~~~~ 244 (296)
T 3e5z_A 230 LIWAS---------A-GDGVHVLTP 244 (296)
T ss_dssp CEEEE---------E-TTEEEEECT
T ss_pred CEEEE---------c-CCeEEEECC
Confidence 75544 2 455777764
No 191
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.96 E-value=0.00014 Score=45.50 Aligned_cols=96 Identities=10% Similarity=-0.001 Sum_probs=55.6
Q ss_pred CeeeecCCCCceeeeeeecc--cccEEEEEEcCCCcEEEEEeCC-----CeEEEEecCCCceeeeecceeeeecCceeeE
Q psy8803 7 EYKRLDYHTPIVETEVLTQH--THQVLHVSFSHNGRYFATCSKD-----GYILVWTSSYPSKVKYSHDMKTFSWKYTQYS 79 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~--~~~v~~i~~s~~~~~l~s~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v 79 (111)
..|.+|++..++.. .+..+ ...+..+.|+||++.|+..+.+ +.|.+||+.++..... ... .... .
T Consensus 216 ~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l----~~~--~~~~-~ 287 (396)
T 3c5m_A 216 ARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEV----MVM--PPCS-H 287 (396)
T ss_dssp CCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEE----EEC--CSEE-E
T ss_pred ceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEe----eeC--CCCC-C
Confidence 45777777644432 33323 2357889999999977666433 4499999987654321 110 1112 6
Q ss_pred EEcc-CCCEEEEeccccC--------CccccCceEEEeec
Q psy8803 80 QFNE-SDTLLLVSGVHFG--------TPQSTSGEIAVFSL 110 (111)
Q Consensus 80 ~~~~-~~~~~~~~~~~~~--------~~~~~~~~i~iw~~ 110 (111)
+|+| ++..++..+.+.. .....+..|.+||+
T Consensus 288 ~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~ 327 (396)
T 3c5m_A 288 LMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNT 327 (396)
T ss_dssp EEECSSSSEEEEEECCC----------CCCCCCEEEEEET
T ss_pred CccCCCCceEEEecCCcceeeccccccccCCCCcEEEEec
Confidence 7888 8887665432100 00023577999986
No 192
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.94 E-value=4.6e-05 Score=51.74 Aligned_cols=84 Identities=10% Similarity=-0.173 Sum_probs=54.2
Q ss_pred cccCeeeecCCCCceeeeeeecccccE--EEEEEcCCCcEEEEEeCCCe-------------EEEEecCCCce---eeee
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQHTHQV--LHVSFSHNGRYFATCSKDGY-------------ILVWTSSYPSK---VKYS 65 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~~~~v--~~i~~s~~~~~l~s~~~d~~-------------i~iw~~~~~~~---~~~~ 65 (111)
+.+.+|++||+.+++.+. ..+...+ ..++|+|||+.|+.++.+.. |++|++.+... ....
T Consensus 144 ~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~ 221 (695)
T 2bkl_A 144 ADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHE 221 (695)
T ss_dssp CSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEEC
T ss_pred CceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEe
Confidence 345789999999887641 1121222 67899999999999887665 99999987542 1111
Q ss_pred cceeeeecCceeeEEEccCCCEEEEec
Q psy8803 66 HDMKTFSWKYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 66 ~~~~~~~~~~~~~v~~~~~~~~~~~~~ 92 (111)
..- . -.....+.|+|++..++.+.
T Consensus 222 ~~~--~-~~~~~~~~~SpDG~~l~~~~ 245 (695)
T 2bkl_A 222 RTG--D-PTTFLQSDLSRDGKYLFVYI 245 (695)
T ss_dssp CCC--C-TTCEEEEEECTTSCCEEEEE
T ss_pred cCC--C-CEEEEEEEECCCCCEEEEEE
Confidence 000 0 01234678899998876654
No 193
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.94 E-value=7.3e-05 Score=47.56 Aligned_cols=91 Identities=13% Similarity=-0.046 Sum_probs=64.2
Q ss_pred eeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEe----------CCCeEEEEecCCCceeeeecceeee------
Q psy8803 8 YKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCS----------KDGYILVWTSSYPSKVKYSHDMKTF------ 71 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~----------~d~~i~iw~~~~~~~~~~~~~~~~~------ 71 (111)
++.+.|..+++.+.++..-... .+.++||++.+..+. .++.+.+||+.+.+.... +...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~---I~v~~~~~~~ 121 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIAD---IELPDAPRFS 121 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEE---EEETTSCSCC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEE---EECCCccccc
Confidence 7889999999988888643344 799999988766664 367899999999876652 2110
Q ss_pred ecCceeeEEEccCCCEEEEeccccCCcccc-CceEEE--eec
Q psy8803 72 SWKYTQYSQFNESDTLLLVSGVHFGTPQST-SGEIAV--FSL 110 (111)
Q Consensus 72 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~i~i--w~~ 110 (111)
.......++++|++.+++++. .. .+.+.+ +|+
T Consensus 122 ~g~~P~~ia~SpDGk~lyVan-------~~~~~~v~V~~iD~ 156 (368)
T 1mda_H 122 VGPRVHIIGNCASSACLLFFL-------FGSSAAAGLSVPGA 156 (368)
T ss_dssp BSCCTTSEEECTTSSCEEEEE-------CSSSCEEEEEETTT
T ss_pred cCCCcceEEEcCCCCEEEEEc-------cCCCCeEEEEEEch
Confidence 002345789999999888764 22 355776 765
No 194
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.93 E-value=0.00026 Score=43.70 Aligned_cols=75 Identities=3% Similarity=0.094 Sum_probs=48.3
Q ss_pred eeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCC---------------------------CeEEEEecCCCc
Q psy8803 8 YKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKD---------------------------GYILVWTSSYPS 60 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d---------------------------~~i~iw~~~~~~ 60 (111)
.|.+|++..++...... +.. +..+.|+||++.|+.++.+ ..|.+|++.++.
T Consensus 86 ~l~~~~~~~g~~~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 163 (347)
T 2gop_A 86 EIWVADLETLSSKKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE 163 (347)
T ss_dssp EEEEEETTTTEEEEEEE-ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred eEEEEECCCCceEEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence 47777887776544333 334 8999999999988877632 468889988766
Q ss_pred eeeeecceeeeecCceeeEEEccCCCEEEEe
Q psy8803 61 KVKYSHDMKTFSWKYTQYSQFNESDTLLLVS 91 (111)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 91 (111)
.... +.. . .+..++|+|++ .++++
T Consensus 164 ~~~~---l~~-~--~~~~~~~spdg-~~~~~ 187 (347)
T 2gop_A 164 VIEE---FEK-P--RFSSGIWHRDK-IVVNV 187 (347)
T ss_dssp EEEE---EEE-E--TTCEEEEETTE-EEEEE
T ss_pred EEee---ecC-C--CcccccCCCCe-EEEEE
Confidence 5221 111 1 34467889888 44443
No 195
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.93 E-value=0.00033 Score=41.71 Aligned_cols=92 Identities=7% Similarity=0.031 Sum_probs=59.0
Q ss_pred cCeeeecCCCCceeeeeee-cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 6 EEYKRLDYHTPIVETEVLT-QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~-~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
++.|..||....... .+. .....+..++++++++++++...++.|.+|+.......... .........+++.++
T Consensus 86 ~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~----~~~~~~p~~i~~~~~ 160 (270)
T 1rwi_B 86 NNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP----FTGLNDPDGVAVDNS 160 (270)
T ss_dssp TTEEEEECTTCSCCE-ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC----CCSCCSCCCEEECTT
T ss_pred CCEEEEEeCCCceEe-eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeec----cccCCCceeEEEeCC
Confidence 678888887754332 222 23357889999999998888777889999976544322210 011134567888888
Q ss_pred CCEEEEeccccCCccccCceEEEeec
Q psy8803 85 DTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+.. +++. ..++.|.+||.
T Consensus 161 g~l-~v~~-------~~~~~i~~~~~ 178 (270)
T 1rwi_B 161 GNV-YVTD-------TDNNRVVKLEA 178 (270)
T ss_dssp CCE-EEEE-------GGGTEEEEECT
T ss_pred CCE-EEEE-------CCCCEEEEEec
Confidence 874 4443 34567888875
No 196
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.89 E-value=0.00016 Score=46.89 Aligned_cols=97 Identities=13% Similarity=0.105 Sum_probs=66.3
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEe----------CCCeEEEEecCCCceeeeec---ceeeeec
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCS----------KDGYILVWTSSYPSKVKYSH---DMKTFSW 73 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~----------~d~~i~iw~~~~~~~~~~~~---~~~~~~~ 73 (111)
+.|.+.|..+.+.+..+.--... .+.++||++.+..+. .++.+.++|..+.+...... .-+....
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence 78999999999988888633334 899999988766654 35689999999877654210 0000001
Q ss_pred CceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 74 KYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 74 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.....++|+|++.+++++. ...++.|.+.|++
T Consensus 177 ~~P~~~~~spDGk~lyV~n------~~~~~~VsVID~~ 208 (426)
T 3c75_H 177 TYQWMNALTPDNKNLLFYQ------FSPAPAVGVVDLE 208 (426)
T ss_dssp CCGGGSEECTTSSEEEEEE------CSSSCEEEEEETT
T ss_pred CCcceEEEcCCCCEEEEEe------cCCCCeEEEEECC
Confidence 2345689999999988865 1125678888863
No 197
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.86 E-value=0.00033 Score=43.75 Aligned_cols=83 Identities=13% Similarity=0.142 Sum_probs=48.7
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcC-CCcEEEEEe----------------CCCeEEEEecCCCceeeeeccee
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSH-NGRYFATCS----------------KDGYILVWTSSYPSKVKYSHDMK 69 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~-~~~~l~s~~----------------~d~~i~iw~~~~~~~~~~~~~~~ 69 (111)
+.|.+||+.+++...... ... .. ..|+| |+++++.++ .+..|.+||+..+..........
T Consensus 264 ~~l~~~d~~~g~~~~l~~-~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 340 (396)
T 3c5m_A 264 RVIYKANPETLENEEVMV-MPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHST 340 (396)
T ss_dssp EEEEEECTTTCCEEEEEE-CCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCC
T ss_pred ceEEEEECCCCCeEEeee-CCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCC
Confidence 459999998775432221 111 22 88999 999888754 24689999987754322100000
Q ss_pred eee------cCceeeEEEccCCCEEEEec
Q psy8803 70 TFS------WKYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 70 ~~~------~~~~~~v~~~~~~~~~~~~~ 92 (111)
... .......+|+|++..++.+.
T Consensus 341 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~s 369 (396)
T 3c5m_A 341 SWDVLDGDRQITHPHPSFTPNDDGVLFTS 369 (396)
T ss_dssp CCCCBTTBSSTTCCCCEECTTSSEEEEEE
T ss_pred ccccccccccCCCCCceEccCCCeEEEEe
Confidence 000 00133568899998887765
No 198
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.85 E-value=0.0013 Score=44.19 Aligned_cols=59 Identities=3% Similarity=-0.131 Sum_probs=43.4
Q ss_pred ccccCeeeecCCC--CceeeeeeecccccEEEEEEc----CCCcEEEEEe-CCCeEEEEecCCCcee
Q psy8803 3 SWYEEYKRLDYHT--PIVETEVLTQHTHQVLHVSFS----HNGRYFATCS-KDGYILVWTSSYPSKV 62 (111)
Q Consensus 3 ~~~d~~i~iw~~~--~~~~~~~~~~~~~~v~~i~~s----~~~~~l~s~~-~d~~i~iw~~~~~~~~ 62 (111)
++.|+.|.+||+. +.+.+..+.. ......+.|+ |||++++.+. .++.+.++|..+.+..
T Consensus 214 ~~~dg~V~viD~~~~t~~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~ 279 (567)
T 1qks_A 214 IGRDGKVNMIDLWMKEPTTVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPK 279 (567)
T ss_dssp EETTSEEEEEETTSSSCCEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEE
T ss_pred EcCCCeEEEEECCCCCCcEeEEEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEE
Confidence 3468899999995 6666666653 3346789999 6998777665 4589999998775443
No 199
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.84 E-value=5.9e-05 Score=51.23 Aligned_cols=80 Identities=9% Similarity=-0.002 Sum_probs=52.0
Q ss_pred ccccEEEEEEcCCCcEEE-----EEeCCCeEEEEecCCCcee-eeecceeeeecCceeeEEEccCCCEEEEeccccCCc-
Q psy8803 26 HTHQVLHVSFSHNGRYFA-----TCSKDGYILVWTSSYPSKV-KYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTP- 98 (111)
Q Consensus 26 ~~~~v~~i~~s~~~~~l~-----s~~~d~~i~iw~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~- 98 (111)
|...+..+.|||||+.|+ .|+++..|++||+.++... .. .+.. .....++|+|++..++.+..+....
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~--~~~~---~~~~~~~wspDg~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD--VIEG---GKYATPKWTPDSKGFYYEWLPTDPSI 193 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC--CBSC---CTTCCCEECTTSSEEEEEECCCCTTS
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc--ccCc---ccccceEEecCCCEEEEEEecCCCCC
Confidence 445788999999999988 4555678999999987654 11 1111 1114678999999887765332210
Q ss_pred ----cccCceEEEeec
Q psy8803 99 ----QSTSGEIAVFSL 110 (111)
Q Consensus 99 ----~~~~~~i~iw~~ 110 (111)
......|.+|++
T Consensus 194 ~~~~~~~~~~v~~~~l 209 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTL 209 (695)
T ss_dssp CGGGGGGGCEEEEEET
T ss_pred ccccCCCCCEEEEEEC
Confidence 012345888875
No 200
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.76 E-value=0.00035 Score=47.58 Aligned_cols=80 Identities=11% Similarity=0.075 Sum_probs=51.5
Q ss_pred ccccEEEEEEcCCCcEEEEEeCCC-----eEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCc--
Q psy8803 26 HTHQVLHVSFSHNGRYFATCSKDG-----YILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTP-- 98 (111)
Q Consensus 26 ~~~~v~~i~~s~~~~~l~s~~~d~-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-- 98 (111)
|...+..++|||||+.|+.+..++ .|++||+.++...... ... .....++|+|++..++.+..+....
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~--~~~---~~~~~~~wspDg~~l~~~~~~~~~~~~ 197 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV--LER---VKFSCMAWTHDGKGMFYNAYPQQDGKS 197 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE--EEE---ECSCCEEECTTSSEEEEEECCCCSSCC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccc--ccC---cccceEEEEeCCCEEEEEEECCccccc
Confidence 334688999999999988765432 8999999987655411 111 1134688999999888776332210
Q ss_pred ------cccCceEEEeec
Q psy8803 99 ------QSTSGEIAVFSL 110 (111)
Q Consensus 99 ------~~~~~~i~iw~~ 110 (111)
......|.+|++
T Consensus 198 ~~~~~~~~~~~~v~~~~l 215 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVL 215 (710)
T ss_dssp SSSCCCCCCCCEEEEEET
T ss_pred cccccccCCCCEEEEEEC
Confidence 011345888875
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.70 E-value=0.0021 Score=38.97 Aligned_cols=87 Identities=8% Similarity=-0.087 Sum_probs=54.0
Q ss_pred ccccCeeeecCCCCceeeeeee----cccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCceeee-ecceeeeecCce
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLT----QHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKVKY-SHDMKTFSWKYT 76 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~----~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~~~-~~~~~~~~~~~~ 76 (111)
...++.|..||..+++...... ++...+..+.++++ ++++++... ..+.+||.. +..... ...........+
T Consensus 42 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-~~l~~~d~~-g~~~~~~~~~~~~~~~~~~ 119 (314)
T 1pjx_A 42 GKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-LGLLVVQTD-GTFEEIAKKDSEGRRMQGC 119 (314)
T ss_dssp TEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-TEEEEEETT-SCEEECCSBCTTSCBCBCC
T ss_pred CCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-CCEEEEeCC-CCEEEEEeccCCCccccCC
Confidence 3567889999987665432211 25567899999999 887766654 378899987 443321 111011111345
Q ss_pred eeEEEccCCCEEEEe
Q psy8803 77 QYSQFNESDTLLLVS 91 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~ 91 (111)
+.+++.+++..+++.
T Consensus 120 ~~i~~d~~g~l~v~~ 134 (314)
T 1pjx_A 120 NDCAFDYEGNLWITA 134 (314)
T ss_dssp CEEEECTTSCEEEEE
T ss_pred cCEEECCCCCEEEEe
Confidence 678899888766554
No 202
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.66 E-value=0.002 Score=39.16 Aligned_cols=95 Identities=8% Similarity=-0.005 Sum_probs=62.1
Q ss_pred ccCeeeecCCCCceeeeeeecc-cccEEEEEEcCCCcEEEEEeC-CCeEEEEecCCCceee-e--ecceeeeecCceeeE
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQH-THQVLHVSFSHNGRYFATCSK-DGYILVWTSSYPSKVK-Y--SHDMKTFSWKYTQYS 79 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~-~~~v~~i~~s~~~~~l~s~~~-d~~i~iw~~~~~~~~~-~--~~~~~~~~~~~~~~v 79 (111)
.++.|..||. +++.+..+..+ ...+..+.+.++|+.+++.+. ++.+..++.. ++... . ...+. ....+...+
T Consensus 54 ~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk~l~~~~~~~~~~-~~~~~~~~v 130 (276)
T 3no2_A 54 YSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMK-GEVLSKTEFETGIE-RPHAQFRQI 130 (276)
T ss_dssp CBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT-SCEEEEEEECCSCS-SGGGSCSCC
T ss_pred CCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCC-CCEEEEEeccCCCC-cccccccCc
Confidence 4677899998 68888888764 357888999999999999877 7788888764 33322 1 11110 001123345
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+..+++..+++ . ..++.|..||.
T Consensus 131 ~~~~~G~~lv~-~-------~~~~~v~~~d~ 153 (276)
T 3no2_A 131 NKNKKGNYLVP-L-------FATSEVREIAP 153 (276)
T ss_dssp EECTTSCEEEE-E-------TTTTEEEEECT
T ss_pred eECCCCCEEEE-e-------cCCCEEEEECC
Confidence 66777776644 3 45677888775
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.61 E-value=0.00083 Score=43.12 Aligned_cols=96 Identities=9% Similarity=0.005 Sum_probs=58.2
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCC--eEEEEecCCCceeeeecceeeeecCceeeEEEc
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDG--YILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFN 82 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 82 (111)
.++.|+.||...+........ ..... ++|+++++.|+.+..++ .|.+++.......................++++
T Consensus 150 ~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~ 227 (409)
T 3hrp_A 150 DDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALD 227 (409)
T ss_dssp TTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEEC
T ss_pred CCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEe
Confidence 457888898886665444443 22233 89999999888877655 788888765433221100000011345678899
Q ss_pred cCCCEEEEeccccCCccccCceEEEeec
Q psy8803 83 ESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
|++..++++ ..++.|..||+
T Consensus 228 p~~g~lyv~--------d~~~~I~~~d~ 247 (409)
T 3hrp_A 228 ETEEWLYFV--------DSNKNFGRFNV 247 (409)
T ss_dssp TTSSEEEEE--------CTTCEEEEEET
T ss_pred CCCCeEEEE--------ECCCcEEEEEC
Confidence 966666663 33567888775
No 204
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.55 E-value=0.0017 Score=39.54 Aligned_cols=86 Identities=9% Similarity=0.050 Sum_probs=56.7
Q ss_pred cccCeeeecCC--CCcee-----eeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCce
Q psy8803 4 WYEEYKRLDYH--TPIVE-----TEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYT 76 (111)
Q Consensus 4 ~~d~~i~iw~~--~~~~~-----~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 76 (111)
..++.|..|++ .++.. ...+..+.+....++++++|+++++...++.|..||..+++.... +. +.-..+
T Consensus 168 ~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~---i~-~p~~~~ 243 (297)
T 3g4e_A 168 SLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQT---VK-LPVDKT 243 (297)
T ss_dssp GGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEE---EE-CSSSBE
T ss_pred CCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEE---EE-CCCCCc
Confidence 34567888876 33422 223333446778899999999998888888999999987665442 11 111345
Q ss_pred eeEEEc-cCCCEEEEecc
Q psy8803 77 QYSQFN-ESDTLLLVSGV 93 (111)
Q Consensus 77 ~~v~~~-~~~~~~~~~~~ 93 (111)
++++|. |+...|+++..
T Consensus 244 t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 244 TSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEEESGGGCEEEEEEB
T ss_pred eEEEEeCCCCCEEEEEcC
Confidence 678898 77777766653
No 205
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.49 E-value=0.0017 Score=40.52 Aligned_cols=77 Identities=10% Similarity=0.134 Sum_probs=51.0
Q ss_pred ccccEEEEEEcCCCcEEEEEeC-----CCeEEEEecCCCceeeee---cceeeeecCceeeEEEccCCCEEEEeccccCC
Q psy8803 26 HTHQVLHVSFSHNGRYFATCSK-----DGYILVWTSSYPSKVKYS---HDMKTFSWKYTQYSQFNESDTLLLVSGVHFGT 97 (111)
Q Consensus 26 ~~~~v~~i~~s~~~~~l~s~~~-----d~~i~iw~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 97 (111)
+...+..++++++++++++-.. +..|.+||+.+++..... .... ......+.+++.+++..++++.
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~-~~~~~~~~v~vd~~~g~~yvtd----- 138 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPIT-LSNSFVNDLAVDLIHNFVYISD----- 138 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTS-CTTCCCCEEEEETTTTEEEEEE-----
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhc-ccccccceEEEecCCCEEEEEc-----
Confidence 4568899999999988776543 578999999877644311 0110 0112357889998766666654
Q ss_pred ccc---cCceEEEeec
Q psy8803 98 PQS---TSGEIAVFSL 110 (111)
Q Consensus 98 ~~~---~~~~i~iw~~ 110 (111)
. .++.|.+||+
T Consensus 139 --~~~~~~~~i~v~d~ 152 (343)
T 2qe8_A 139 --PAPDDKAALIRVDL 152 (343)
T ss_dssp --CCSGGGCEEEEEET
T ss_pred --CccCCCCeEEEEEC
Confidence 3 5677888885
No 206
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.42 E-value=0.0012 Score=45.32 Aligned_cols=97 Identities=4% Similarity=-0.084 Sum_probs=57.9
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCC--------------eEEEEecCCCceeeeecceeeee
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDG--------------YILVWTSSYPSKVKYSHDMKTFS 72 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~--------------~i~iw~~~~~~~~~~~~~~~~~~ 72 (111)
..|++||+.+++.+.. ..+...+..++|+|| +.|+.++.+. .|.+|++.+...... .+....
T Consensus 189 ~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~--lv~~~~ 264 (741)
T 1yr2_A 189 RTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQ--PVFATP 264 (741)
T ss_dssp EEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCE--EEECCT
T ss_pred EEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCE--EEeccC
Confidence 4699999998876542 222223357899999 8888776554 388888866431100 011000
Q ss_pred c--CceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 73 W--KYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 73 ~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
. .....+.|+|++..++....+.. .....|.+||+
T Consensus 265 ~~~~~~~~~~~SpDG~~l~~~~~~~~---~~~~~l~~~d~ 301 (741)
T 1yr2_A 265 ELPKRGHGASVSSDGRWVVITSSEGT---DPVNTVHVARV 301 (741)
T ss_dssp TCTTCEEEEEECTTSCEEEEEEECTT---CSCCEEEEEEE
T ss_pred CCCeEEEEEEECCCCCEEEEEEEccC---CCcceEEEEEC
Confidence 0 12346788999988877652211 12457888885
No 207
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.42 E-value=0.0068 Score=36.90 Aligned_cols=93 Identities=11% Similarity=0.003 Sum_probs=55.5
Q ss_pred cCeeeecCCCCceeeeeeec----ccccEEEEEEcCCCcEEEEEeCC---------CeEEEEecCC-Cceeeeecceeee
Q psy8803 6 EEYKRLDYHTPIVETEVLTQ----HTHQVLHVSFSHNGRYFATCSKD---------GYILVWTSSY-PSKVKYSHDMKTF 71 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~----~~~~v~~i~~s~~~~~l~s~~~d---------~~i~iw~~~~-~~~~~~~~~~~~~ 71 (111)
+..|.+||..+++....... ....+..+.++|+|+++++.... ..-.+|.+.. +.... +..
T Consensus 72 ~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~----~~~- 146 (297)
T 3g4e_A 72 GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK----YFD- 146 (297)
T ss_dssp TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE----EEE-
T ss_pred CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE----Eee-
Confidence 45678888876654322221 23457889999999987765321 2334554442 22221 111
Q ss_pred ecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 72 SWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 72 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.....+.++|+|++..++++. +..+.|.+|++
T Consensus 147 ~~~~pngi~~spdg~~lyv~~-------~~~~~i~~~~~ 178 (297)
T 3g4e_A 147 QVDISNGLDWSLDHKIFYYID-------SLSYSVDAFDY 178 (297)
T ss_dssp EESBEEEEEECTTSCEEEEEE-------GGGTEEEEEEE
T ss_pred ccccccceEEcCCCCEEEEec-------CCCCcEEEEec
Confidence 113456889999998887766 55677888874
No 208
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.41 E-value=0.007 Score=36.91 Aligned_cols=98 Identities=7% Similarity=0.010 Sum_probs=67.0
Q ss_pred cccCeeeecCCCCceeeeeeecc-----cccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeee-------
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQH-----THQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTF------- 71 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~-----~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~------- 71 (111)
..++.+.+.|..+.+.+..+.-- -..+..+.|. ++.+++....+..|.+.|..+++...... +..+
T Consensus 123 ~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~-~~g~~~~~~~~ 200 (266)
T 2iwa_A 123 DGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWIL-LPNLRKKLIDE 200 (266)
T ss_dssp CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEE-CHHHHHHHHHT
T ss_pred CCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEE-CCCcccccccc
Confidence 35778999999887766666521 1246678887 78888777677899999999987665211 1000
Q ss_pred ---ecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 72 ---SWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 72 ---~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
...-.+.++|+|++..+++++ .....+...++
T Consensus 201 ~~~~~~v~nGIa~~~~~~~lfVTg-------k~~~~v~~i~l 235 (266)
T 2iwa_A 201 GFRDIDVLNGIAWDQENKRIFVTG-------KLWPKLFEIKL 235 (266)
T ss_dssp TCTTCCCEEEEEEETTTTEEEEEE-------TTCSEEEEEEE
T ss_pred cccccCceEEEEEcCCCCEEEEEC-------CCCCeEEEEEE
Confidence 002347899999999999988 55566666554
No 209
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.35 E-value=0.0077 Score=36.06 Aligned_cols=93 Identities=10% Similarity=-0.053 Sum_probs=57.4
Q ss_pred ccCeeeecCCCCceeee-eeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEcc
Q psy8803 5 YEEYKRLDYHTPIVETE-VLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~-~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
.++.+..+|. .++... .+......+..+.++++++++++...++.+..++. ++........ .....+..+++.+
T Consensus 118 ~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~---~~~~~~~~i~~~~ 192 (299)
T 2z2n_A 118 NGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIP---TPASGPVGITKGN 192 (299)
T ss_dssp TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECS---STTCCEEEEEECT
T ss_pred CCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCC---CCCCcceeEEECC
Confidence 4567888887 443322 22334567889999999999888877789999998 4443321100 0113355788888
Q ss_pred CCCEEEEeccccCCccccCceEEEeec
Q psy8803 84 SDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
++...++ . ..++.|.+||.
T Consensus 193 ~g~l~v~-~-------~~~~~i~~~~~ 211 (299)
T 2z2n_A 193 DDALWFV-E-------IIGNKIGRITT 211 (299)
T ss_dssp TSSEEEE-E-------TTTTEEEEECT
T ss_pred CCCEEEE-c-------cCCceEEEECC
Confidence 8775444 3 33556776653
No 210
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.33 E-value=0.00031 Score=44.43 Aligned_cols=56 Identities=7% Similarity=-0.099 Sum_probs=29.0
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCce
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSK 61 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~ 61 (111)
+++.|+.+..||..+|+.+..+..+. ...++|++..++.++.++.+..||.++++.
T Consensus 97 ~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~ 152 (369)
T 2hz6_A 97 MGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTREL 152 (369)
T ss_dssp CCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSC
T ss_pred EEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCE
Confidence 45678999999999998877776543 234567888888888899999999987653
No 211
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.32 E-value=0.013 Score=38.48 Aligned_cols=99 Identities=11% Similarity=-0.011 Sum_probs=62.8
Q ss_pred ccCeeeecCCCCceeeeeeec--ccccEEEEEE--cCCCcEEEEEe------CCCeEEEEecCCCceee-eecceeee--
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQ--HTHQVLHVSF--SHNGRYFATCS------KDGYILVWTSSYPSKVK-YSHDMKTF-- 71 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~--~~~~v~~i~~--s~~~~~l~s~~------~d~~i~iw~~~~~~~~~-~~~~~~~~-- 71 (111)
++.+|.+||+.+++.+..+.- .......+.| +|++++...++ .+++|.+|....+.-.. ..-.+...
T Consensus 226 ~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v 305 (462)
T 2ece_A 226 YGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPL 305 (462)
T ss_dssp SCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEEC
T ss_pred cCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccc
Confidence 578999999998877777653 1234456656 99988655554 56678777665432111 00000100
Q ss_pred e-------------cCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 72 S-------------WKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 72 ~-------------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
. ......+.+++++..+.++. -..+.|.++|+
T Consensus 306 ~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSn-------rg~d~VavfdV 350 (462)
T 2ece_A 306 EGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSL-------WGIGEVRQYDI 350 (462)
T ss_dssp CSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEE-------TTTTEEEEEEC
T ss_pred cccccccccccccCCCceeEEEECCCCCEEEEEe-------CCCCEEEEEEe
Confidence 0 12356789999999999987 55678999986
No 212
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.28 E-value=0.014 Score=37.51 Aligned_cols=76 Identities=7% Similarity=0.067 Sum_probs=51.1
Q ss_pred ccEEEEEEcCCCcEEEEEe-CCCeEEEEecCCCceeeeecc--e--------eeeecCceeeEEEccCCCEEEEeccccC
Q psy8803 28 HQVLHVSFSHNGRYFATCS-KDGYILVWTSSYPSKVKYSHD--M--------KTFSWKYTQYSQFNESDTLLLVSGVHFG 96 (111)
Q Consensus 28 ~~v~~i~~s~~~~~l~s~~-~d~~i~iw~~~~~~~~~~~~~--~--------~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 96 (111)
.....++++++++++++-. .+.+|+.|++..+........ . ....+.....+++.+++ .++++-
T Consensus 323 ~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g-~lyVad---- 397 (409)
T 3hrp_A 323 AQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEG-GYWIAE---- 397 (409)
T ss_dssp SSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSS-EEEEEE----
T ss_pred CCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCC-CEEEEE----
Confidence 3478899999999888887 889999999766543321100 0 00113456789999985 555655
Q ss_pred CccccCceEEEeecC
Q psy8803 97 TPQSTSGEIAVFSLQ 111 (111)
Q Consensus 97 ~~~~~~~~i~iw~~~ 111 (111)
...+.|+.++++
T Consensus 398 ---~~n~~Ir~i~~e 409 (409)
T 3hrp_A 398 ---AWGKAIRKYAVE 409 (409)
T ss_dssp ---STTCEEEEEEEC
T ss_pred ---CCCCeEEEEEeC
Confidence 567778887764
No 213
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.27 E-value=0.0098 Score=35.59 Aligned_cols=93 Identities=6% Similarity=-0.105 Sum_probs=57.8
Q ss_pred ccCeeeecCCCCceeeee-eecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEcc
Q psy8803 5 YEEYKRLDYHTPIVETEV-LTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~-~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 83 (111)
.++.+..+|. +++.... +......+..++++++++++++...++.+..|+. ++........ .....+..+++.+
T Consensus 160 ~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~---~~~~~~~~i~~~~ 234 (299)
T 2z2n_A 160 QNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIP---TPNARPHAITAGA 234 (299)
T ss_dssp TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECS---STTCCEEEEEECS
T ss_pred CCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECC---CCCCCceeEEECC
Confidence 3567788887 4543322 2334456889999999998888777789999998 5443221111 0113456788888
Q ss_pred CCCEEEEeccccCCccccCceEEEeec
Q psy8803 84 SDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
++...++ . ..++.|..||.
T Consensus 235 ~g~l~v~-~-------~~~~~i~~~d~ 253 (299)
T 2z2n_A 235 GIDLWFT-E-------WGANKIGRLTS 253 (299)
T ss_dssp TTCEEEE-E-------TTTTEEEEEET
T ss_pred CCCEEEe-c-------cCCceEEEECC
Confidence 8774443 2 24556777763
No 214
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.27 E-value=0.0069 Score=36.99 Aligned_cols=82 Identities=6% Similarity=-0.168 Sum_probs=52.0
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
.++.|..|+.. ++ ...+..+...+..+.++++|+++++...++.|..|+.. +................++.+++.|+
T Consensus 65 ~~~~i~~~~~~-g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~d 141 (305)
T 3dr2_A 65 VGRRVLGWRED-GT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARD 141 (305)
T ss_dssp TTTEEEEEETT-SC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTT
T ss_pred CCCEEEEEeCC-CC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCC
Confidence 45677788773 43 33444466778999999999988777667889999876 33222111111111234567888988
Q ss_pred CCEEE
Q psy8803 85 DTLLL 89 (111)
Q Consensus 85 ~~~~~ 89 (111)
+...+
T Consensus 142 G~l~~ 146 (305)
T 3dr2_A 142 GAIWF 146 (305)
T ss_dssp SCEEE
T ss_pred CCEEE
Confidence 87654
No 215
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.25 E-value=0.0088 Score=37.97 Aligned_cols=58 Identities=5% Similarity=-0.152 Sum_probs=41.7
Q ss_pred ccCeeeecCCCCceeeeeeecc-------cccEEEEEEcCCCcEEEEEeC--CCeEEEEecCCCceee
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQH-------THQVLHVSFSHNGRYFATCSK--DGYILVWTSSYPSKVK 63 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~-------~~~v~~i~~s~~~~~l~s~~~--d~~i~iw~~~~~~~~~ 63 (111)
.++.|.++|..+.+.+..+.-. ...-..+.|+|||+.|..+.. +..|.++| .+.+...
T Consensus 95 ~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~ 161 (373)
T 2mad_H 95 RTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDD 161 (373)
T ss_pred CCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEe
Confidence 3678999999877766655321 123457899999998888764 47899999 8776544
No 216
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.23 E-value=0.0025 Score=43.72 Aligned_cols=78 Identities=13% Similarity=0.021 Sum_probs=48.3
Q ss_pred cccEEEEEEcCCCcEEEEEeCC-----CeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCC----
Q psy8803 27 THQVLHVSFSHNGRYFATCSKD-----GYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGT---- 97 (111)
Q Consensus 27 ~~~v~~i~~s~~~~~l~s~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---- 97 (111)
...+..+.|||||+.|+.+..+ ..|++||+.++..... ..... ....++|+|+ ..++.+..+...
T Consensus 162 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~--~~~~~---~~~~~~wspD-~~l~~~~~~~~~~~~~ 235 (741)
T 1yr2_A 162 ATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD--ELKWV---KFSGLAWLGN-DALLYSRFAEPKEGQA 235 (741)
T ss_dssp -EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE--EEEEE---ESCCCEESTT-SEEEEEECCCC-----
T ss_pred CEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc--cCCCc---eeccEEEECC-CEEEEEEecCcccccc
Confidence 3467889999999988876543 4699999998775432 11111 1235788999 888776533220
Q ss_pred --ccccCceEEEeec
Q psy8803 98 --PQSTSGEIAVFSL 110 (111)
Q Consensus 98 --~~~~~~~i~iw~~ 110 (111)
.......|.+|++
T Consensus 236 ~~~~~~~~~v~~~~l 250 (741)
T 1yr2_A 236 FQALNYNQTVWLHRL 250 (741)
T ss_dssp ---CCCCCEEEEEET
T ss_pred cccCCCCCEEEEEEC
Confidence 0011345777775
No 217
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.18 E-value=0.0042 Score=42.41 Aligned_cols=96 Identities=15% Similarity=0.027 Sum_probs=57.8
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCC-------------eEEEEecCCCce----eeeecc
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDG-------------YILVWTSSYPSK----VKYSHD 67 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~-------------~i~iw~~~~~~~----~~~~~~ 67 (111)
.+.+|+++|+.+++.+.. .........++|+ |++.|+.+..+. .|++|++.+... +.....
T Consensus 153 ~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~ 230 (693)
T 3iuj_A 153 DWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIP 230 (693)
T ss_dssp CEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSG
T ss_pred ceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCC
Confidence 346899999998875432 1111123577899 999888877663 488888876432 211110
Q ss_pred -eeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 68 -MKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 68 -~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
-. .....+.++|++..++.+.... ...+.|.++|+
T Consensus 231 ~~~----~~~~~~~~SpDg~~l~~~~~~~----~~~~~i~~~d~ 266 (693)
T 3iuj_A 231 AQH----HRYVGATVTEDDRFLLISAANS----TSGNRLYVKDL 266 (693)
T ss_dssp GGC----CSEEEEEECTTSCEEEEEEESS----SSCCEEEEEET
T ss_pred CCC----eEEEEEEEcCCCCEEEEEEccC----CCCcEEEEEEC
Confidence 00 1123567899999887654111 12357888875
No 218
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.13 E-value=0.00012 Score=46.33 Aligned_cols=58 Identities=16% Similarity=0.014 Sum_probs=38.0
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCce
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSK 61 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~ 61 (111)
+++.|+.+..||..+|+.+-.+.. +.+.+..+..++..++.++.|+.++.||.++++.
T Consensus 14 ~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~ 71 (369)
T 2hz6_A 14 VSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEG 71 (369)
T ss_dssp EEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CC
T ss_pred EEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCce
Confidence 456789999999999998877765 4455545556777888888999999999976543
No 219
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.03 E-value=0.022 Score=35.19 Aligned_cols=89 Identities=11% Similarity=-0.055 Sum_probs=52.5
Q ss_pred eeeecCCCCceeeeeeec----ccccEEEEEEcCCCcEEEEEeC------CCeEEEEecCCCceeeeecceeeeecCcee
Q psy8803 8 YKRLDYHTPIVETEVLTQ----HTHQVLHVSFSHNGRYFATCSK------DGYILVWTSSYPSKVKYSHDMKTFSWKYTQ 77 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~----~~~~v~~i~~s~~~~~l~s~~~------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 77 (111)
.+.+||..+++....... ....+..+.++|+|+++++... .+.|..++ .+..... .. .....+
T Consensus 110 gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~----~~-~~~~~~ 182 (326)
T 2ghs_A 110 GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL----FA-DISIPN 182 (326)
T ss_dssp EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE----EE-EESSEE
T ss_pred CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe----eC-CCcccC
Confidence 477788776653321111 1246889999999998776542 23455555 3332211 11 112356
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.++|+|++..++++. ..++.|.+||+
T Consensus 183 ~i~~s~dg~~lyv~~-------~~~~~I~~~d~ 208 (326)
T 2ghs_A 183 SICFSPDGTTGYFVD-------TKVNRLMRVPL 208 (326)
T ss_dssp EEEECTTSCEEEEEE-------TTTCEEEEEEB
T ss_pred CeEEcCCCCEEEEEE-------CCCCEEEEEEc
Confidence 788999998776665 45667888875
No 220
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.02 E-value=0.0039 Score=42.56 Aligned_cols=79 Identities=15% Similarity=0.100 Sum_probs=48.8
Q ss_pred ccccEEEEEEcCCCcEEEE-----EeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCC---
Q psy8803 26 HTHQVLHVSFSHNGRYFAT-----CSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGT--- 97 (111)
Q Consensus 26 ~~~~v~~i~~s~~~~~l~s-----~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--- 97 (111)
+...+..+.|||||+.|+- |++...|+++|+.+++.... .+... ....++|+ ++..++.+..+...
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~--~~~~~---k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET--PLKDV---KFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE--EEEEE---ESCCCEEE-TTTEEEEEESSCCC---
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc--ccCCc---eeccEEEe-CCCEEEEEEecCccccc
Confidence 4456888999999998873 33446799999998775442 11111 12356788 88888776533210
Q ss_pred --ccccCceEEEeec
Q psy8803 98 --PQSTSGEIAVFSL 110 (111)
Q Consensus 98 --~~~~~~~i~iw~~ 110 (111)
.......|.+|++
T Consensus 201 ~~~~~~~~~v~~~~l 215 (693)
T 3iuj_A 201 LSARTDQHKVYFHRL 215 (693)
T ss_dssp ----CCCCEEEEEET
T ss_pred ccccCCCcEEEEEEC
Confidence 0012345777765
No 221
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.93 E-value=0.025 Score=37.17 Aligned_cols=85 Identities=4% Similarity=-0.071 Sum_probs=57.2
Q ss_pred ccCeeeecCCCCceeeeeeecc---cccEEEEEEcCCCcEEEEEe-------------------CCCeEEEEecCCCcee
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQH---THQVLHVSFSHNGRYFATCS-------------------KDGYILVWTSSYPSKV 62 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~---~~~v~~i~~s~~~~~l~s~~-------------------~d~~i~iw~~~~~~~~ 62 (111)
..+.+.+.|..+.+.+.++..- ...-+.+-|+|+++.+++.. ...+|.+||+...+..
T Consensus 162 ~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~ 241 (462)
T 2ece_A 162 GPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRI 241 (462)
T ss_dssp SCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEE
T ss_pred CCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEe
Confidence 3478999999989888888622 23345688899999888884 4679999999876544
Q ss_pred eeecceeee-ecCceeeEEE--ccCCCEEEEec
Q psy8803 63 KYSHDMKTF-SWKYTQYSQF--NESDTLLLVSG 92 (111)
Q Consensus 63 ~~~~~~~~~-~~~~~~~v~~--~~~~~~~~~~~ 92 (111)
.. +... .-.....+.| +|++.+.++..
T Consensus 242 ~t---I~vg~~g~~P~~i~f~~~Pdg~~aYV~~ 271 (462)
T 2ece_A 242 HS---LTLGEENRMALELRPLHDPTKLMGFINM 271 (462)
T ss_dssp EE---EESCTTEEEEEEEEECSSTTCCEEEEEE
T ss_pred eE---EecCCCCCccceeEeeECCCCCEEEEEE
Confidence 31 1110 0012334545 99998887766
No 222
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.90 E-value=0.005 Score=42.19 Aligned_cols=84 Identities=8% Similarity=-0.057 Sum_probs=56.1
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
++|++..||+.+++.+-.+..+. ....-.+...+.+++.++.|+.++.||.++++.+-....-.. .....+.|..+
T Consensus 453 ~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~---~~~~p~ty~~~ 528 (689)
T 1yiq_A 453 WSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASG---VMAAPVTYSVD 528 (689)
T ss_dssp CEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC---CCSCCEEEEET
T ss_pred cceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCC---cccCceEEEEC
Confidence 46899999999999887766443 233335566788888999999999999999877642111100 11124566667
Q ss_pred CCEEEEec
Q psy8803 85 DTLLLVSG 92 (111)
Q Consensus 85 ~~~~~~~~ 92 (111)
+..+++..
T Consensus 529 G~qyv~~~ 536 (689)
T 1yiq_A 529 GEQYVTFM 536 (689)
T ss_dssp TEEEEEEE
T ss_pred CEEEEEEE
Confidence 77665544
No 223
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.87 E-value=0.03 Score=34.15 Aligned_cols=51 Identities=6% Similarity=-0.139 Sum_probs=32.7
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCC------CeEEEEecCCC
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKD------GYILVWTSSYP 59 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d------~~i~iw~~~~~ 59 (111)
+.|..+|..+++.... . .......++|+||++.|..+... ..|.+|++...
T Consensus 169 ~~v~~~d~~~g~~~~~-~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRM-A-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp EEEEEECSSSCCCEEE-E-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETT
T ss_pred CeEEEEcCCCCcEEEE-e-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC
Confidence 4566666654543322 2 33456789999999866665544 68999988654
No 224
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.86 E-value=0.03 Score=34.10 Aligned_cols=87 Identities=10% Similarity=0.089 Sum_probs=59.0
Q ss_pred ccCeeeecCCCCceeeeeeecc--c---ccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeee--ccee------ee
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQH--T---HQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYS--HDMK------TF 71 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~--~---~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~--~~~~------~~ 71 (111)
.++.+.++|..+.+.+..+.-. . ..+..+.|. +|++++..-.+..|.+.|.++++....- .... .-
T Consensus 144 Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~ 222 (262)
T 3nol_A 144 GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPS 222 (262)
T ss_dssp SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCS
T ss_pred CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccC
Confidence 3566888888877766666421 1 344567776 7888877767889999999998766511 1010 00
Q ss_pred ecCceeeEEEccCCCEEEEec
Q psy8803 72 SWKYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 72 ~~~~~~~v~~~~~~~~~~~~~ 92 (111)
...-.+.+|++|+...++++|
T Consensus 223 ~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 223 PIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp SCCCEEEEEEETTTTEEEEEE
T ss_pred cCCceEEEEEcCCCCEEEEEC
Confidence 113458899999999999987
No 225
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.85 E-value=0.011 Score=40.00 Aligned_cols=95 Identities=4% Similarity=-0.072 Sum_probs=59.5
Q ss_pred CeeeecCCCC--cee-eeeeecccccEEEEEEcCCCcEEEEE-eCCCeEEEEecCCCce-----eeeecce-eeee-cCc
Q psy8803 7 EYKRLDYHTP--IVE-TEVLTQHTHQVLHVSFSHNGRYFATC-SKDGYILVWTSSYPSK-----VKYSHDM-KTFS-WKY 75 (111)
Q Consensus 7 ~~i~iw~~~~--~~~-~~~~~~~~~~v~~i~~s~~~~~l~s~-~~d~~i~iw~~~~~~~-----~~~~~~~-~~~~-~~~ 75 (111)
+.|.+.|..+ ++. +..+. -....-++.++|||++++.+ ..+..+.++|+..... +.....+ ..+. -..
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~g 332 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLG 332 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSC
T ss_pred CcEEEEeCcccCCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCC
Confidence 3477888876 433 33333 22355678999999876555 4677999999985421 0000000 0000 134
Q ss_pred eeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 76 TQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
...++|+|++ .+.++. --+++|.+||+
T Consensus 333 P~h~aF~~dG-~aY~t~-------~ldsqV~kwdi 359 (595)
T 1fwx_A 333 PLHTAFDGRG-NAYTSL-------FLDSQVVKWNI 359 (595)
T ss_dssp EEEEEECTTS-EEEEEE-------TTTTEEEEEEH
T ss_pred cceEEECCCC-eEEEEE-------ecCCcEEEEEh
Confidence 5688999999 666666 77889999996
No 226
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.82 E-value=0.0089 Score=38.38 Aligned_cols=58 Identities=9% Similarity=-0.012 Sum_probs=44.3
Q ss_pred cCeeeecCCCCceeeeeeeccc-------ccEEEEEEcCCCcEEEEEeC--CCeEEEEecCCCceee
Q psy8803 6 EEYKRLDYHTPIVETEVLTQHT-------HQVLHVSFSHNGRYFATCSK--DGYILVWTSSYPSKVK 63 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~~~-------~~v~~i~~s~~~~~l~s~~~--d~~i~iw~~~~~~~~~ 63 (111)
+++|.+||..+.+.+..+.-.. ..-..+.|+|||+.+..+.. +..+.++|+.+.+...
T Consensus 108 ~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~ 174 (386)
T 3sjl_D 108 TDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKR 174 (386)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEE
T ss_pred CCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEE
Confidence 6789999999988877764211 23456899999998777653 6799999999877655
No 227
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.79 E-value=0.032 Score=33.33 Aligned_cols=91 Identities=13% Similarity=0.050 Sum_probs=55.9
Q ss_pred cCeeeecCCCCceee-eeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 6 EEYKRLDYHTPIVET-EVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 6 d~~i~iw~~~~~~~~-~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
++.|..+|.. ++.. ..+......+..+.++++++++++...++.+..++.. +........ . .......+++.++
T Consensus 82 ~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~--~-~~~~~~~i~~d~~ 156 (300)
T 2qc5_A 82 ANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLP--N-KGSYPAFITLGSD 156 (300)
T ss_dssp TTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECS--S-TTCCEEEEEECTT
T ss_pred CCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCC--C-CCCCceeEEECCC
Confidence 5678888877 5432 2222234678899999999998888777889999887 433321100 0 1134567788887
Q ss_pred CCEEEEeccccCCccccCceEEEee
Q psy8803 85 DTLLLVSGVHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~iw~ 109 (111)
+... ++. ...+.|..+|
T Consensus 157 g~l~-v~~-------~~~~~i~~~~ 173 (300)
T 2qc5_A 157 NALW-FTE-------NQNNSIGRIT 173 (300)
T ss_dssp SSEE-EEE-------TTTTEEEEEC
T ss_pred CCEE-EEe-------cCCCeEEEEC
Confidence 7744 433 2344566654
No 228
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.72 E-value=0.036 Score=33.09 Aligned_cols=92 Identities=8% Similarity=-0.036 Sum_probs=55.2
Q ss_pred cCeeeecCCCCceeee-eeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 6 EEYKRLDYHTPIVETE-VLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~-~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
++.|..++. .++... .+..+...+..+.++++++++++....+.+.+++.. +........ .....+..+++.++
T Consensus 166 ~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~---~~~~~~~~i~~d~~ 240 (300)
T 2qc5_A 166 NNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTT-GEISEYDIP---TPNARPHAITAGKN 240 (300)
T ss_dssp TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT-CCEEEEECS---STTCCEEEEEECST
T ss_pred CCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCC-CcEEEEECC---CCCCCceEEEECCC
Confidence 566777777 344322 222344578899999999988887777889999983 332221111 01133557888888
Q ss_pred CCEEEEeccccCCccccCceEEEeec
Q psy8803 85 DTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+...++ . ..++.|..+|.
T Consensus 241 g~l~v~-~-------~~~~~i~~~~~ 258 (300)
T 2qc5_A 241 SEIWFT-E-------WGANQIGRITN 258 (300)
T ss_dssp TCEEEE-E-------TTTTEEEEECT
T ss_pred CCEEEe-c-------cCCCeEEEECC
Confidence 764443 3 23455666653
No 229
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.72 E-value=0.026 Score=35.93 Aligned_cols=67 Identities=7% Similarity=-0.092 Sum_probs=45.4
Q ss_pred EEEcCCCcEEEEE-e---C-----CCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccc-cC
Q psy8803 33 VSFSHNGRYFATC-S---K-----DGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQS-TS 102 (111)
Q Consensus 33 i~~s~~~~~l~s~-~---~-----d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~ 102 (111)
+.++||++.+..+ . . +..+.++|+.+.+.... +.-. .....++|+|++..++++. . .+
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~---i~vg--~~p~gi~~s~Dg~~l~va~-------~~~~ 336 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGP---ISNG--HDSDAIIAAQDGASDNYAN-------SAGT 336 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEEC---CEEE--EEECEEEECCSSSCEEEEE-------ETTT
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEE---EECC--CCcceEEECCCCCEEEEEc-------cCCC
Confidence 6799997655543 3 1 23566999998776652 2211 1355789999998776766 5 58
Q ss_pred ceEEEeecC
Q psy8803 103 GEIAVFSLQ 111 (111)
Q Consensus 103 ~~i~iw~~~ 111 (111)
+.|.++|++
T Consensus 337 ~~VsVID~~ 345 (368)
T 1mda_H 337 EVLDIYDAA 345 (368)
T ss_dssp TEEEEEESS
T ss_pred CeEEEEECC
Confidence 899999974
No 230
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.68 E-value=0.044 Score=33.48 Aligned_cols=87 Identities=8% Similarity=0.006 Sum_probs=59.3
Q ss_pred ccCeeeecCCCCceeeeeeec--c---cccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeee--cce-------ee
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQ--H---THQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYS--HDM-------KT 70 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~--~---~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~--~~~-------~~ 70 (111)
.++.+.++|..+.+.+..+.- + -..+..+.|. +|++++..-....|.+.|.++++....- ... ..
T Consensus 153 Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~ 231 (268)
T 3nok_A 153 GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVT 231 (268)
T ss_dssp SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCC
T ss_pred CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCccccccccc
Confidence 467788888888777666642 1 1245667776 7888877767789999999998766511 000 00
Q ss_pred eecCceeeEEEccCCCEEEEec
Q psy8803 71 FSWKYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 71 ~~~~~~~~v~~~~~~~~~~~~~ 92 (111)
-...-.+.+|++|+...++++|
T Consensus 232 ~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 232 NPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp CTTCCEEEEEECTTTCCEEEEE
T ss_pred CcCCceEEEEEcCCCCEEEEeC
Confidence 0113468899999888888887
No 231
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=96.67 E-value=0.049 Score=33.87 Aligned_cols=87 Identities=5% Similarity=-0.165 Sum_probs=55.3
Q ss_pred cCeeeecCCCCceeeeeeec------ccccEEEEEEcCC-CcEEEEEe---CCCeEEEEecCCCceeeee----cc----
Q psy8803 6 EEYKRLDYHTPIVETEVLTQ------HTHQVLHVSFSHN-GRYFATCS---KDGYILVWTSSYPSKVKYS----HD---- 67 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~------~~~~v~~i~~s~~-~~~l~s~~---~d~~i~iw~~~~~~~~~~~----~~---- 67 (111)
++.|.+||..+++.+..+.. +...+..++++++ +..+++-. .++.|.+||+..+...... ..
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~ 171 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPED 171 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCS
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccc
Confidence 46788999988876665542 2245688999986 56666655 6789999998765433211 00
Q ss_pred --ee----eee----------c-CceeeEEEccCCCEEEEec
Q psy8803 68 --MK----TFS----------W-KYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 68 --~~----~~~----------~-~~~~~v~~~~~~~~~~~~~ 92 (111)
+. .+. | ...+.++++|++..++++.
T Consensus 172 ~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~ 213 (343)
T 2qe8_A 172 IDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSP 213 (343)
T ss_dssp CCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEE
T ss_pred cceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEe
Confidence 00 000 1 2357899999988776654
No 232
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.58 E-value=0.047 Score=33.37 Aligned_cols=92 Identities=9% Similarity=0.051 Sum_probs=55.0
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEc
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFN 82 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 82 (111)
++.+|.|+.+|+.+++.+..+......--.+.+.. ++++...-.++.+.++|..+.+...... .....| ...
T Consensus 71 tG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~-~~~eGw------GLt 142 (268)
T 3nok_A 71 TGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTR-YSGEGW------GLC 142 (268)
T ss_dssp ETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEEE-CSSCCC------CEE
T ss_pred cCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEEe-CCCcee------EEe
Confidence 45677799999999987776621111122355543 3555555678899999999877665211 011112 223
Q ss_pred cCCCEEEEeccccCCccccCceEEEeec
Q psy8803 83 ESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+++..++++- .+++|.++|.
T Consensus 143 ~Dg~~L~vSd--------Gs~~l~~iDp 162 (268)
T 3nok_A 143 YWNGKLVRSD--------GGTMLTFHEP 162 (268)
T ss_dssp EETTEEEEEC--------SSSEEEEECT
T ss_pred cCCCEEEEEC--------CCCEEEEEcC
Confidence 4566776653 3677888874
No 233
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.53 E-value=0.053 Score=32.64 Aligned_cols=89 Identities=12% Similarity=0.066 Sum_probs=59.7
Q ss_pred ccccCeeeecCCCCceeeeeeeccc-----ccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeee--ccee------
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHT-----HQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYS--HDMK------ 69 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~-----~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~--~~~~------ 69 (111)
|..++.|.++|..+.+.+..+.-.. ..+..+.|. +|++++..-.+..|.+.|.++++....- ....
T Consensus 120 Sdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~ 198 (243)
T 3mbr_X 120 SDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADAL 198 (243)
T ss_dssp ECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSC
T ss_pred ECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccc
Confidence 3346778888888777666665221 345566665 6788877766779999999998766511 1110
Q ss_pred -eeecCceeeEEEccCCCEEEEec
Q psy8803 70 -TFSWKYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 70 -~~~~~~~~~v~~~~~~~~~~~~~ 92 (111)
.....-.+.+|++|+...++++|
T Consensus 199 ~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 199 TDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp CCTTSSCEEEEEEETTTTEEEEEE
T ss_pred cCCcCCceEEEEEcCCCCEEEEEC
Confidence 00113468899999999999987
No 234
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.53 E-value=0.026 Score=38.66 Aligned_cols=82 Identities=7% Similarity=-0.068 Sum_probs=54.6
Q ss_pred cCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCC
Q psy8803 6 EEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESD 85 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 85 (111)
.|.+..||..+++.+-.+. +...+....+..++.+++.++.++.+++||.++++.+.....-.. .....+.|.+++
T Consensus 456 ~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~---~~~~p~~y~~~G 531 (677)
T 1kb0_A 456 FGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTG---VVAAPSTYMVDG 531 (677)
T ss_dssp EEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC---CCSCCEEEEETT
T ss_pred ccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCC---cccCCEEEEeCC
Confidence 4889999999998877665 333444455667788888889999999999999876652111100 111245566677
Q ss_pred CEEEEe
Q psy8803 86 TLLLVS 91 (111)
Q Consensus 86 ~~~~~~ 91 (111)
..+++.
T Consensus 532 ~~~v~~ 537 (677)
T 1kb0_A 532 RQYVSV 537 (677)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 666555
No 235
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.46 E-value=0.06 Score=36.58 Aligned_cols=101 Identities=12% Similarity=0.051 Sum_probs=62.6
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCC---------------eEEEEecCC-------Cc
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDG---------------YILVWTSSY-------PS 60 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~---------------~i~iw~~~~-------~~ 60 (111)
..+++.+.+.|..+.+....+.- .+.--.+.++|+|+++++.+.+. .+.+.|... +.
T Consensus 171 ~~~~~~vtvID~~t~~v~~qI~V-gg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk 249 (595)
T 1fwx_A 171 ANYVNVFTAVDADKWEVAWQVLV-SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGD 249 (595)
T ss_dssp GGEEEEEEEEETTTTEEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTC
T ss_pred cccCceEEEEECCCCeEEEEEEe-CCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCC
Confidence 35677888888887766665542 12445678999999888887653 244444321 00
Q ss_pred -------eee--ee--c-c-eeeee-cCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 61 -------KVK--YS--H-D-MKTFS-WKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 61 -------~~~--~~--~-~-~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
..- .. . . +..+. .....++.++|++.++++++ -.+.+|.++|++
T Consensus 250 ~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~-------~~s~~VsVid~~ 307 (595)
T 1fwx_A 250 YQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAG-------KLSPTVTVLDVT 307 (595)
T ss_dssp SEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEEC-------TTSSBEEEEEGG
T ss_pred eeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeC-------CCCCeEEEEECc
Confidence 000 00 0 0 11111 02346799999999999988 778889999863
No 236
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.45 E-value=0.069 Score=32.96 Aligned_cols=82 Identities=11% Similarity=-0.042 Sum_probs=51.4
Q ss_pred cCeeeecCCC--Cc-e-----eeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCcee
Q psy8803 6 EEYKRLDYHT--PI-V-----ETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQ 77 (111)
Q Consensus 6 d~~i~iw~~~--~~-~-----~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 77 (111)
++.|.+|++. ++ + ....+.........+.++++|+++++...++.|..|+.. +..... +. ..-..+.
T Consensus 200 ~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g~~~~~---i~-~~~~~~~ 274 (326)
T 2ghs_A 200 VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GNHIAR---YE-VPGKQTT 274 (326)
T ss_dssp TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-CCEEEE---EE-CSCSBEE
T ss_pred CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC-CCEEEE---EE-CCCCCcE
Confidence 5678888875 44 2 122222234566789999999988887777889999984 333321 11 1112456
Q ss_pred eEEEc-cCCCEEEEec
Q psy8803 78 YSQFN-ESDTLLLVSG 92 (111)
Q Consensus 78 ~v~~~-~~~~~~~~~~ 92 (111)
.++|. +++..++++.
T Consensus 275 ~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 275 CPAFIGPDASRLLVTS 290 (326)
T ss_dssp EEEEESTTSCEEEEEE
T ss_pred EEEEecCCCCEEEEEe
Confidence 78898 7777776654
No 237
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.14 E-value=0.12 Score=32.62 Aligned_cols=98 Identities=7% Similarity=-0.037 Sum_probs=63.1
Q ss_pred cCeeeecCCC---Cceeeeeee--ccc-----------ccEEEEEEcCCCcEEEEEeCC-CeEEEEecCCCceee-eecc
Q psy8803 6 EEYKRLDYHT---PIVETEVLT--QHT-----------HQVLHVSFSHNGRYFATCSKD-GYILVWTSSYPSKVK-YSHD 67 (111)
Q Consensus 6 d~~i~iw~~~---~~~~~~~~~--~~~-----------~~v~~i~~s~~~~~l~s~~~d-~~i~iw~~~~~~~~~-~~~~ 67 (111)
+..+..+|.. +++.+.... ... .....++..++|+.+++.+.. +.|...+........ ....
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~ 178 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWES 178 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECC
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecC
Confidence 5667788887 665544332 221 247899999999999998877 777777665442221 1111
Q ss_pred eeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 68 MKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 68 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.+.......+.++++|++..|++.. + .+.+..+|++
T Consensus 179 ~~~~~~~G~nGIv~~pdg~~Liv~~-------~-~g~L~~fD~~ 214 (334)
T 2p9w_A 179 GNGGQRPGYSGITFDPHSNKLIAFG-------G-PRALTAFDVS 214 (334)
T ss_dssp CCSSSCCSCSEEEEETTTTEEEEES-------S-SSSEEEEECS
T ss_pred CCcccccCcceEEEeCCCCEEEEEc-------C-CCeEEEEcCC
Confidence 1111112356899999999998876 5 7778877753
No 238
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.08 E-value=0.07 Score=36.61 Aligned_cols=22 Identities=5% Similarity=-0.331 Sum_probs=17.5
Q ss_pred ccccCeeeecCCCCceeeeeee
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLT 24 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~ 24 (111)
...+|.+.++|..+|+.+..+.
T Consensus 333 ~~~~G~l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 333 APKNGFFFVLDRTNGKFISAKN 354 (677)
T ss_dssp CCTTSEEEEEETTTCCEEEEEE
T ss_pred ECCCCEEEEEECCCCCEecccc
Confidence 4568899999999998776554
No 239
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.06 E-value=0.14 Score=33.63 Aligned_cols=97 Identities=12% Similarity=0.082 Sum_probs=58.9
Q ss_pred cCeeeecCCCCceeeeeeecc----cccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee--------------eecc
Q psy8803 6 EEYKRLDYHTPIVETEVLTQH----THQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK--------------YSHD 67 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~~----~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~--------------~~~~ 67 (111)
+..||.-++.++...+.+.-. -+.+..+..+|+|++||..+. ..+.|-.+..+.... +..+
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~ 118 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDE 118 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGG
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCC
Confidence 456776666654444444322 235788999999999999875 588888887321000 1010
Q ss_pred eeeeecCceeeEEEccCC---CEEEEeccccCCccccCceEEEeecC
Q psy8803 68 MKTFSWKYTQYSQFNESD---TLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 68 ~~~~~~~~~~~v~~~~~~---~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.....-.++..+.|+|-+ ..+++. ..|++|++||+.
T Consensus 119 ~~~~~~s~I~qVlWHPl~~~ds~LVVL--------tsD~~Ir~yDl~ 157 (452)
T 3pbp_A 119 EEVGPKSSIKKVLFHPKSYRDSCIVVL--------KEDDTITMFDIL 157 (452)
T ss_dssp CC--CCCCEEEEEECTTBGGGCEEEEE--------ETTSCEEEEETT
T ss_pred cccCCCCceeEEEeccccCCCCeEEEE--------ecCCEEEEEEcc
Confidence 000011457778889843 455554 468899999974
No 240
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.89 E-value=0.14 Score=31.23 Aligned_cols=97 Identities=8% Similarity=0.044 Sum_probs=57.0
Q ss_pred cccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceee--eecCceeeE
Q psy8803 2 KSWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKT--FSWKYTQYS 79 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~--~~~~~~~~v 79 (111)
+++.++.+.++|..+.+.+..+.--... .+.+++|++.+..+..++.+.++|..+.+...... +.. ......+.+
T Consensus 81 ~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~-Vg~~~~p~~~~nel 157 (266)
T 2iwa_A 81 VVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHN-VKYNGHRVIRLNEL 157 (266)
T ss_dssp EETTCSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEE-CEETTEECCCEEEE
T ss_pred EEecCCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEE-ECCCCcccccceeE
Confidence 3567889999999988888877521122 23355676655555567899999998866554211 110 001123455
Q ss_pred EEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 80 QFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.|. ++ .+.+.. -.++.|.+-|.
T Consensus 158 e~~-dg-~lyvn~-------~~~~~V~vID~ 179 (266)
T 2iwa_A 158 EYI-NG-EVWANI-------WQTDCIARISA 179 (266)
T ss_dssp EEE-TT-EEEEEE-------TTSSEEEEEET
T ss_pred EEE-CC-EEEEec-------CCCCeEEEEEC
Confidence 556 44 454443 34566777765
No 241
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.73 E-value=0.15 Score=30.36 Aligned_cols=94 Identities=5% Similarity=-0.098 Sum_probs=52.3
Q ss_pred cCeeeecCCCCceeeeeeecccccEEEEEEcCC-CcEEEEEeC--CCeEEEEecCCCceeeeecceeeeecCceeeEEEc
Q psy8803 6 EEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHN-GRYFATCSK--DGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFN 82 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 82 (111)
.+.|.+++...................++++|+ +.++++-.. .+.|..+++........ ........+.++++
T Consensus 100 ~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~----~~~~~~~P~gia~d 175 (267)
T 1npe_A 100 LDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL----AQDNLGLPNGLTFD 175 (267)
T ss_dssp TTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEE----ECTTCSCEEEEEEE
T ss_pred CCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE----EECCCCCCcEEEEc
Confidence 345556555422211111111245688999996 555555433 46788887764322111 00112345678899
Q ss_pred cCCCEEEEeccccCCccccCceEEEeec
Q psy8803 83 ESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+++..+.++- ...+.|.++|+
T Consensus 176 ~~~~~lyv~d-------~~~~~I~~~~~ 196 (267)
T 1npe_A 176 AFSSQLCWVD-------AGTHRAECLNP 196 (267)
T ss_dssp TTTTEEEEEE-------TTTTEEEEEET
T ss_pred CCCCEEEEEE-------CCCCEEEEEec
Confidence 9877777765 55667887775
No 242
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=95.71 E-value=0.06 Score=35.02 Aligned_cols=57 Identities=5% Similarity=0.101 Sum_probs=46.6
Q ss_pred cCeeeecCCCCceeeeeeecccccEEEEEEcCCCc-EEEEEe-CCCeEEEEecCCCceee
Q psy8803 6 EEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGR-YFATCS-KDGYILVWTSSYPSKVK 63 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~-~l~s~~-~d~~i~iw~~~~~~~~~ 63 (111)
++.|.+.|..+.+.+.++..- .....+.|+||++ .+++.. .++.+.++|+.+.+...
T Consensus 349 s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~ 407 (426)
T 3c75_H 349 SRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELR 407 (426)
T ss_dssp EEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred CCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEE
Confidence 457999999999888887632 3578999999998 777777 58999999999987765
No 243
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.20 E-value=0.27 Score=29.97 Aligned_cols=58 Identities=9% Similarity=0.130 Sum_probs=40.7
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~ 63 (111)
++.++.+.++|..+.+.+..+.- ...-..+ ++|++.|..+.....|.++|..+.+...
T Consensus 103 tw~~~~v~v~D~~t~~~~~ti~~-~~eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~ 160 (262)
T 3nol_A 103 TWKNGLGFVWNIRNLRQVRSFNY-DGEGWGL--THNDQYLIMSDGTPVLRFLDPESLTPVR 160 (262)
T ss_dssp ESSSSEEEEEETTTCCEEEEEEC-SSCCCCE--EECSSCEEECCSSSEEEEECTTTCSEEE
T ss_pred EeeCCEEEEEECccCcEEEEEEC-CCCceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEE
Confidence 56788999999999988888863 2222333 4566655555557789999998866554
No 244
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.14 E-value=0.29 Score=29.98 Aligned_cols=70 Identities=16% Similarity=0.218 Sum_probs=45.2
Q ss_pred cEEEEEEcC-CCcEEEEEeC-----------------CCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEE
Q psy8803 29 QVLHVSFSH-NGRYFATCSK-----------------DGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLV 90 (111)
Q Consensus 29 ~v~~i~~s~-~~~~l~s~~~-----------------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 90 (111)
....+++.+ +|+++++-.. ++.+..+|......... .. .....+.++++|++..+++
T Consensus 127 ~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~---~~--~~~~p~gia~~~dg~~lyv 201 (322)
T 2fp8_A 127 WLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLL---LK--ELHVPGGAEVSADSSFVLV 201 (322)
T ss_dssp CEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEE---EE--EESCCCEEEECTTSSEEEE
T ss_pred ccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEe---cc--CCccCcceEECCCCCEEEE
Confidence 467899999 8988877532 35677787765543221 11 1234567899999887766
Q ss_pred eccccCCccccCceEEEeec
Q psy8803 91 SGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 91 ~~~~~~~~~~~~~~i~iw~~ 110 (111)
+- ...+.|.++++
T Consensus 202 ~d-------~~~~~I~~~~~ 214 (322)
T 2fp8_A 202 AE-------FLSHQIVKYWL 214 (322)
T ss_dssp EE-------GGGTEEEEEES
T ss_pred Ee-------CCCCeEEEEEC
Confidence 54 44566777765
No 245
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=94.63 E-value=0.36 Score=28.64 Aligned_cols=83 Identities=12% Similarity=-0.109 Sum_probs=47.7
Q ss_pred cCeeeecCCCCceeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 6 EEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
++.|..++...+.....+.........++++++ +.++++-...+.|.++++........ ........+.++++|+
T Consensus 57 ~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~----~~~~~~~P~~i~vd~~ 132 (267)
T 1npe_A 57 EPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL----FDTGLVNPRGIVTDPV 132 (267)
T ss_dssp TTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE----ECSSCSSEEEEEEETT
T ss_pred CCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE----EECCCCCccEEEEeeC
Confidence 455666666543322222222246788999986 55666666678899998865332111 0011134567889987
Q ss_pred CCEEEEec
Q psy8803 85 DTLLLVSG 92 (111)
Q Consensus 85 ~~~~~~~~ 92 (111)
+..++++.
T Consensus 133 ~g~lyv~~ 140 (267)
T 1npe_A 133 RGNLYWTD 140 (267)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEEE
Confidence 66665543
No 246
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=94.50 E-value=0.57 Score=30.34 Aligned_cols=71 Identities=10% Similarity=0.055 Sum_probs=46.6
Q ss_pred EEEEEEcC-CCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEe
Q psy8803 30 VLHVSFSH-NGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVF 108 (111)
Q Consensus 30 v~~i~~s~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw 108 (111)
...++++| ++.++++-..++.|..++.......... .... ....+.++|+|++..++++- ...+.|..+
T Consensus 228 p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~-~~~~--~~~P~gia~~pdG~~lyv~d-------~~~~~I~~~ 297 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLF-TIQD--SGWEFHIQFHPSGNYAYIVV-------VNQHYILRS 297 (430)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEE-ECSS--SSCCEEEEECTTSSEEEEEE-------TTTTEEEEE
T ss_pred ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-EcCC--CCcceeEEEcCCCCEEEEEE-------CCCCEEEEE
Confidence 45678899 6888887777889999998765432110 0100 12356799999998776665 456667776
Q ss_pred ec
Q psy8803 109 SL 110 (111)
Q Consensus 109 ~~ 110 (111)
+.
T Consensus 298 ~~ 299 (430)
T 3tc9_A 298 DY 299 (430)
T ss_dssp EE
T ss_pred eC
Confidence 53
No 247
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=94.47 E-value=0.43 Score=28.76 Aligned_cols=58 Identities=5% Similarity=-0.003 Sum_probs=40.9
Q ss_pred ccccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~ 63 (111)
++.++.+.++|..+.+.+.++... ..-..++ +++..|..+..+..|.++|..+.+...
T Consensus 81 tw~~~~v~v~D~~tl~~~~ti~~~-~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~ 138 (243)
T 3mbr_X 81 TWRNHEGFVYDLATLTPRARFRYP-GEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVG 138 (243)
T ss_dssp ESSSSEEEEEETTTTEEEEEEECS-SCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEE
T ss_pred EeeCCEEEEEECCcCcEEEEEeCC-CCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEE
Confidence 567889999999999988888732 2224444 566555455557899999998865544
No 248
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.33 E-value=0.32 Score=33.32 Aligned_cols=59 Identities=7% Similarity=-0.123 Sum_probs=43.5
Q ss_pred cccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~ 63 (111)
.++|.+.-||..+++.+-...... ......+...+.+++.++.|+.++.||.++++.+.
T Consensus 435 ~~~g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~ 493 (668)
T 1kv9_A 435 VVSGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALW 493 (668)
T ss_dssp GCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CccceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCCEEEEECCcccchhhhhhcChhhe
Confidence 356899999999998876665332 22333344567888888999999999999887654
No 249
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.22 E-value=0.7 Score=31.24 Aligned_cols=84 Identities=10% Similarity=-0.025 Sum_probs=50.3
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
.+|.+.-||..+++.+-+..... .+..-.....+.+++.++.|+.++.+|.++++.+-....-..+ ....+.+..+
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~---~a~P~~y~~~ 539 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGI---VSPPITWEQD 539 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC---CSCCEEEEET
T ss_pred CcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCc---ccCceEEEEC
Confidence 36889999999998776554221 2111112224667777899999999999998766421111111 1123556567
Q ss_pred CCEEEEec
Q psy8803 85 DTLLLVSG 92 (111)
Q Consensus 85 ~~~~~~~~ 92 (111)
+..+++..
T Consensus 540 G~qYv~~~ 547 (582)
T 1flg_A 540 GEQYLGVT 547 (582)
T ss_dssp TEEEEEEE
T ss_pred CEEEEEEE
Confidence 76665554
No 250
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=93.86 E-value=0.74 Score=29.27 Aligned_cols=93 Identities=8% Similarity=-0.071 Sum_probs=51.5
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCC-CcEEEEEeCC-CeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHN-GRYFATCSKD-GYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d-~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
+.|.+.+.........+.........++++|. +.++.+-... +.|...++........ ........+.++++|+
T Consensus 181 ~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~----~~~~~~~PnGlavd~~ 256 (386)
T 3v65_B 181 SRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII----ADTHLFWPNGLTIDYA 256 (386)
T ss_dssp TEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE----ECSSCSCEEEEEEEGG
T ss_pred CeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEE----EECCCCCeeeEEEeCC
Confidence 34555555422222222223345688999986 5555555444 7788888765432221 0011234568889987
Q ss_pred CCEEEEeccccCCccccCceEEEeec
Q psy8803 85 DTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+..|..+- ...+.|..+|+
T Consensus 257 ~~~lY~aD-------~~~~~I~~~d~ 275 (386)
T 3v65_B 257 GRRMYWVD-------AKHHVIERANL 275 (386)
T ss_dssp GTEEEEEE-------TTTTEEEEECT
T ss_pred CCEEEEEE-------CCCCEEEEEeC
Confidence 77776654 44556766654
No 251
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=93.84 E-value=0.71 Score=28.94 Aligned_cols=72 Identities=7% Similarity=-0.059 Sum_probs=44.8
Q ss_pred ccEEEEEEcCC-CcEEEEEeCC-CeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceE
Q psy8803 28 HQVLHVSFSHN-GRYFATCSKD-GYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEI 105 (111)
Q Consensus 28 ~~v~~i~~s~~-~~~l~s~~~d-~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i 105 (111)
.....++++|. +.++.+-... +.|...++........ + .......+.++++|++..|..+- ...+.|
T Consensus 159 ~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~---~-~~~~~~PnGla~d~~~~~lY~aD-------~~~~~I 227 (349)
T 3v64_C 159 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII---A-DTHLFWPNGLTIDYAGRRMYWVD-------AKHHVI 227 (349)
T ss_dssp SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEES---C-CSSCSCEEEEEEETTTTEEEEEE-------TTTTEE
T ss_pred CCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEE---E-ECCCCCcceEEEeCCCCEEEEEE-------CCCCEE
Confidence 45688999985 5566665555 7888888765432221 0 01123457889998777776664 445567
Q ss_pred EEeec
Q psy8803 106 AVFSL 110 (111)
Q Consensus 106 ~iw~~ 110 (111)
..+|+
T Consensus 228 ~~~~~ 232 (349)
T 3v64_C 228 ERANL 232 (349)
T ss_dssp EEEET
T ss_pred EEEeC
Confidence 76664
No 252
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=93.84 E-value=0.75 Score=29.24 Aligned_cols=69 Identities=7% Similarity=0.149 Sum_probs=43.5
Q ss_pred ccEEEEEEcCCCcEEEEEeC-----------------CCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEE
Q psy8803 28 HQVLHVSFSHNGRYFATCSK-----------------DGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLV 90 (111)
Q Consensus 28 ~~v~~i~~s~~~~~l~s~~~-----------------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 90 (111)
.....+...++|+.+++... .+.+.-++. ..... + .-.....+.++|+|++..+.+
T Consensus 165 ~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~----~-~~~l~~pNGia~spDg~~lYv 237 (355)
T 3sre_A 165 PSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRV----V-AEGFDFANGINISPDGKYVYI 237 (355)
T ss_dssp SSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEE----E-EEEESSEEEEEECTTSSEEEE
T ss_pred CCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEE----e-ecCCcccCcceECCCCCEEEE
Confidence 45788899999988877541 133333333 21111 1 111245689999999998888
Q ss_pred eccccCCccccCceEEEeec
Q psy8803 91 SGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 91 ~~~~~~~~~~~~~~i~iw~~ 110 (111)
+- +..+.|..|++
T Consensus 238 ad-------t~~~~I~~~~~ 250 (355)
T 3sre_A 238 AE-------LLAHKIHVYEK 250 (355)
T ss_dssp EE-------GGGTEEEEEEE
T ss_pred Ee-------CCCCeEEEEEE
Confidence 76 56677888875
No 253
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=93.73 E-value=0.64 Score=28.11 Aligned_cols=51 Identities=8% Similarity=-0.025 Sum_probs=32.6
Q ss_pred cccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCC
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYP 59 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~ 59 (111)
..++.+..+|.. ++.+..+......+..+...+++.+++.. +.+..+| .++
T Consensus 154 t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g 204 (330)
T 3hxj_A 154 SNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDG 204 (330)
T ss_dssp CTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTS
T ss_pred cCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCC
Confidence 345777777777 66555555444556666677777766555 6677887 443
No 254
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=93.53 E-value=0.53 Score=32.69 Aligned_cols=58 Identities=14% Similarity=0.014 Sum_probs=37.8
Q ss_pred cEEEEEEc-CCCcEEEEEe-CC----CeEEEEecCCC-ceeeeecceeeeecCceeeEEEccCCCEEEEec
Q psy8803 29 QVLHVSFS-HNGRYFATCS-KD----GYILVWTSSYP-SKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 29 ~v~~i~~s-~~~~~l~s~~-~d----~~i~iw~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 92 (111)
.+....|| |||+.|+-.. .+ ..|+++|+.++ ..... .+... ...++|+|++..++.+.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~--~~~~~----~~~~~WspDg~~l~y~~ 239 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD--KVSGT----NGEIVWGPDHTSLFYVT 239 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC--CEEEE----CSCCEECSSTTEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc--cccCc----eeeEEEecCCCEEEEEE
Confidence 57788999 9999877543 22 35999999887 53211 11111 23567899988877765
No 255
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=93.36 E-value=0.81 Score=28.15 Aligned_cols=72 Identities=10% Similarity=-0.093 Sum_probs=43.3
Q ss_pred ccEEEEEEcCC-CcEEEEEeCC-CeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceE
Q psy8803 28 HQVLHVSFSHN-GRYFATCSKD-GYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEI 105 (111)
Q Consensus 28 ~~v~~i~~s~~-~~~l~s~~~d-~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i 105 (111)
.....++++|. +.++.+-... +.|...++........ ........+.+++++++..+..+- ...+.|
T Consensus 120 ~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~----~~~~~~~P~gla~d~~~~~lY~~D-------~~~~~I 188 (316)
T 1ijq_A 120 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL----VTENIQWPNGITLDLLSGRLYWVD-------SKLHSI 188 (316)
T ss_dssp CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEE----ECSSCSCEEEEEEETTTTEEEEEE-------TTTTEE
T ss_pred CCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEE----EECCCCCceEEEEeccCCEEEEEE-------CCCCeE
Confidence 45678899985 5555554333 6788887764332211 001123467888998877776654 445567
Q ss_pred EEeec
Q psy8803 106 AVFSL 110 (111)
Q Consensus 106 ~iw~~ 110 (111)
..+|+
T Consensus 189 ~~~d~ 193 (316)
T 1ijq_A 189 SSIDV 193 (316)
T ss_dssp EEEET
T ss_pred EEEec
Confidence 77664
No 256
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.01 E-value=0.47 Score=32.81 Aligned_cols=71 Identities=10% Similarity=-0.096 Sum_probs=38.8
Q ss_pred cEEEEEEcCC-CcEEEEEeC-CCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEE
Q psy8803 29 QVLHVSFSHN-GRYFATCSK-DGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIA 106 (111)
Q Consensus 29 ~v~~i~~s~~-~~~l~s~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~ 106 (111)
....++++|+ +.++++-.. .+.|...++........ ........+.++++|++..|+++- ...+.|.
T Consensus 497 ~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l----~~~~l~~PnGlavd~~~~~LY~aD-------~~~~~I~ 565 (699)
T 1n7d_A 497 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL----VTENIQWPNGITLDLLSGRLYWVD-------SKLHSIS 565 (699)
T ss_dssp CCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEE----SCSSCSSCCCEEECTTTCCEEEEE-------TTTTEEE
T ss_pred CcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEE----EeCCCCCccEEEEeccCCEEEEEe-------cCCCeEE
Confidence 4567788885 455554422 26777776654222110 001123456788888776666654 4455676
Q ss_pred Eeec
Q psy8803 107 VFSL 110 (111)
Q Consensus 107 iw~~ 110 (111)
.+++
T Consensus 566 ~~d~ 569 (699)
T 1n7d_A 566 SIDV 569 (699)
T ss_dssp EECS
T ss_pred EEcc
Confidence 6654
No 257
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=92.90 E-value=0.61 Score=31.42 Aligned_cols=58 Identities=10% Similarity=-0.078 Sum_probs=39.7
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~ 63 (111)
.+|.+..+|..+++.+-++... ..+....+...+..+..++.|+.++.+|.++++..-
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw 499 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELW 499 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEE
Confidence 4588999999999877666422 222222223345566668899999999999887654
No 258
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=92.45 E-value=1.1 Score=27.85 Aligned_cols=58 Identities=7% Similarity=-0.131 Sum_probs=35.5
Q ss_pred cccCeeeecCCCCceeeeeeecc-cccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQH-THQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~-~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~ 63 (111)
..++.+..+|..+++.+...... ...+..... .+..+..++.++.+.++|.++++...
T Consensus 284 ~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~ 342 (376)
T 3q7m_A 284 DQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVA 342 (376)
T ss_dssp ETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred cCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEE
Confidence 34667777888777765544311 111122222 24567777788999999998876543
No 259
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=92.07 E-value=1.5 Score=28.49 Aligned_cols=71 Identities=10% Similarity=-0.001 Sum_probs=44.1
Q ss_pred EEEEEEcC-CCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEe
Q psy8803 30 VLHVSFSH-NGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVF 108 (111)
Q Consensus 30 v~~i~~s~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw 108 (111)
...++++| ++.++++-..++.|..++..++............ .....++++|++..|+++- ...+.|..+
T Consensus 230 P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~--~~~~~ia~dpdG~~LYvad-------~~~~~I~~~ 300 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTK--GSNFHIVWHPTGDWAYIIY-------NGKHCIYRV 300 (433)
T ss_dssp BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCC--SSCEEEEECTTSSEEEEEE-------TTTTEEEEE
T ss_pred CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCC--CCcccEEEeCCCCEEEEEe-------CCCCEEEEE
Confidence 35577888 6888777777788999988755431110001111 1123589999998776665 455667776
Q ss_pred e
Q psy8803 109 S 109 (111)
Q Consensus 109 ~ 109 (111)
+
T Consensus 301 ~ 301 (433)
T 4hw6_A 301 D 301 (433)
T ss_dssp E
T ss_pred e
Confidence 5
No 260
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=91.90 E-value=1.5 Score=30.54 Aligned_cols=92 Identities=7% Similarity=0.035 Sum_probs=51.4
Q ss_pred CeeeecCCCCc-eeee-eeecccccEEEEEEcCCCcEEEEEeCC-----CeEEEEecCCCce---eeeecceeeeecCce
Q psy8803 7 EYKRLDYHTPI-VETE-VLTQHTHQVLHVSFSHNGRYFATCSKD-----GYILVWTSSYPSK---VKYSHDMKTFSWKYT 76 (111)
Q Consensus 7 ~~i~iw~~~~~-~~~~-~~~~~~~~v~~i~~s~~~~~l~s~~~d-----~~i~iw~~~~~~~---~~~~~~~~~~~~~~~ 76 (111)
.+|.++|+.++ +.+. .+. .....+.|+||++.|+-...+ ..|..+++.+... ......- -...
T Consensus 201 ~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~----~~~~ 273 (751)
T 2xe4_A 201 YTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHN----PLFS 273 (751)
T ss_dssp EEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCC----TTCE
T ss_pred EEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCC----CceE
Confidence 35888888877 5321 111 123467899999877666544 2566777765421 1110000 0112
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
..+.++|++..|+.+... .....|.++|+
T Consensus 274 ~~~~~SpDg~~l~~~~~~-----~~~~~l~~~d~ 302 (751)
T 2xe4_A 274 AFMYKAADTNTLCIGSQS-----PETAEVHLLDL 302 (751)
T ss_dssp EEEEECTTSSEEEEEEEC-----SSCEEEEEEES
T ss_pred EEEEECCCCCEEEEEecC-----CCCceEEEEEC
Confidence 356789999988776521 12455766665
No 261
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.79 E-value=2.7 Score=30.32 Aligned_cols=35 Identities=17% Similarity=0.072 Sum_probs=29.7
Q ss_pred cEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee
Q psy8803 29 QVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 29 ~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~ 63 (111)
.+.++...++..++++-+.|+++++|++.++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~ 271 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVE 271 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEe
Confidence 56677777888899999999999999999887655
No 262
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=91.67 E-value=1.6 Score=27.41 Aligned_cols=62 Identities=6% Similarity=-0.025 Sum_probs=37.1
Q ss_pred ccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee-eecceeeeecCceeeEEEccC---CCEEEEec
Q psy8803 28 HQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK-YSHDMKTFSWKYTQYSQFNES---DTLLLVSG 92 (111)
Q Consensus 28 ~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~ 92 (111)
..-..++|.|+|+++++- .++.|.+++ ...... ....+..........++++|+ +..+.++.
T Consensus 31 ~~P~~ia~~pdG~l~V~e-~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~ 96 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAE-RPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYR 96 (352)
T ss_dssp SCEEEEEECTTSCEEEEE-TTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCceEEEEcCCCeEEEEe-CCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEE
Confidence 356799999999977665 458999888 332211 111111111234678899998 55655544
No 263
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=91.04 E-value=2.6 Score=28.73 Aligned_cols=52 Identities=17% Similarity=0.107 Sum_probs=34.4
Q ss_pred eeeecCCCCce--eeeee-ecccccEEEEEEcCCCcEEEEEeC-CCeEEEEecCCC
Q psy8803 8 YKRLDYHTPIV--ETEVL-TQHTHQVLHVSFSHNGRYFATCSK-DGYILVWTSSYP 59 (111)
Q Consensus 8 ~i~iw~~~~~~--~~~~~-~~~~~~v~~i~~s~~~~~l~s~~~-d~~i~iw~~~~~ 59 (111)
.+.+||..+++ .+..+ ..+......+++..++++++.|+. +..+.+||..+.
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~ 275 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSD 275 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGT
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCC
Confidence 57788887663 22222 223334445677889999999984 457999998764
No 264
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=90.82 E-value=1.7 Score=26.22 Aligned_cols=52 Identities=12% Similarity=0.032 Sum_probs=36.3
Q ss_pred cccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecC
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSS 57 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~ 57 (111)
..++.+..+|.. ++...........+..+...+++.+++ ++.++.+..+|..
T Consensus 114 t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~v-gt~~~~l~~~d~~ 165 (330)
T 3hxj_A 114 SMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYV-GSNDNYLYAINPD 165 (330)
T ss_dssp CTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEE-ECTTSEEEEECTT
T ss_pred ecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEE-EcCCCEEEEECCC
Confidence 457788888888 766655554555556666777777554 5567889999887
No 265
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=90.69 E-value=3.3 Score=29.31 Aligned_cols=78 Identities=9% Similarity=-0.007 Sum_probs=41.3
Q ss_pred ccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCce
Q psy8803 26 HTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGE 104 (111)
Q Consensus 26 ~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (111)
....+..++|++. +.++.+-...+.|+.+++...........+..........+++.+.+..|+.+- ...+.
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD-------~~~~~ 494 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD-------SVLGT 494 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEE-------TTTTE
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEe-------cCCCe
Confidence 3456788999884 566666666778888887642110000011111123345677777666666654 44555
Q ss_pred EEEeec
Q psy8803 105 IAVFSL 110 (111)
Q Consensus 105 i~iw~~ 110 (111)
|.+.++
T Consensus 495 I~v~~l 500 (791)
T 3m0c_C 495 VSVADT 500 (791)
T ss_dssp EEEEET
T ss_pred EEEEeC
Confidence 666554
No 266
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=90.37 E-value=2.1 Score=26.52 Aligned_cols=94 Identities=14% Similarity=0.021 Sum_probs=50.5
Q ss_pred CeeeecCCCCce-eeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 7 EYKRLDYHTPIV-ETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 7 ~~i~iw~~~~~~-~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
..|+..++.... ....+.........+.|++. +.++.+-...+.|..+++....... .+..........+++.+.
T Consensus 13 ~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~---~~~~~~l~~p~glavd~~ 89 (318)
T 3sov_A 13 RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ---NVVVSGLLSPDGLACDWL 89 (318)
T ss_dssp EEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC---EEEEECCSCCCEEEEETT
T ss_pred CeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE---EEEcCCCCCccEEEEEcC
Confidence 456666666442 11111222346678999985 6677776677889999887642111 011111123445677765
Q ss_pred CCEEEEeccccCCccccCceEEEeec
Q psy8803 85 DTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+..++.+- ...+.|.+.++
T Consensus 90 ~g~ly~~d-------~~~~~I~~~~~ 108 (318)
T 3sov_A 90 GEKLYWTD-------SETNRIEVSNL 108 (318)
T ss_dssp TTEEEEEE-------TTTTEEEEEET
T ss_pred CCeEEEEE-------CCCCEEEEEEC
Confidence 55555543 33455666554
No 267
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=89.70 E-value=2.3 Score=26.09 Aligned_cols=92 Identities=10% Similarity=-0.040 Sum_probs=50.6
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCC----ceeeeecceeeeecCceeeEEE
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYP----SKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~----~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
..|+..|+...+....+. .......+.|+++ +.++.+-..++.|..+++... .... +..........+++
T Consensus 10 ~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~----~~~~~~~~p~glav 84 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDT----VISRDIQAPDGLAV 84 (316)
T ss_dssp SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEE----EECSSCSCCCEEEE
T ss_pred CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEE----EEeCCCCCcCEEEE
Confidence 456777777654433332 3456789999986 556666667789999988751 1111 10001123356777
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.+.+..+..+- ...+.|.+.++
T Consensus 85 d~~~~~ly~~d-------~~~~~I~~~~~ 106 (316)
T 1ijq_A 85 DWIHSNIYWTD-------SVLGTVSVADT 106 (316)
T ss_dssp ETTTTEEEEEE-------TTTTEEEEEET
T ss_pred eecCCeEEEEE-------CCCCEEEEEeC
Confidence 76555555543 33455666553
No 268
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=89.68 E-value=2.7 Score=26.86 Aligned_cols=51 Identities=12% Similarity=-0.059 Sum_probs=30.0
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCC
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~ 58 (111)
..|+..++....... +......+..++|++. +.++.+-...+.|..+++..
T Consensus 92 ~~I~~i~l~~~~~~~-~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g 143 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTS-LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDR 143 (400)
T ss_dssp TEEEEECTTSCSCEE-EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC--
T ss_pred ceeEEEccCCcceeE-eccccCcceEEeeeeccCceEEEecCCCeEEEEEccc
Confidence 345555555333222 2224467789999985 55666656678888888764
No 269
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=89.55 E-value=2.6 Score=26.38 Aligned_cols=60 Identities=8% Similarity=-0.081 Sum_probs=36.7
Q ss_pred cEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEec
Q psy8803 29 QVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 29 ~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 92 (111)
....+++++. ++++.+-...+.|.+.++......... .......+.+++.|.+..++.+-
T Consensus 117 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~----~~~l~~P~~iavdp~~g~ly~td 177 (349)
T 3v64_C 117 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL----WQSLEKPRAIALHPMEGTIYWTD 177 (349)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE----CTTCSCEEEEEEETTTTEEEEEE
T ss_pred CccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEE----eCCCCCcceEEEecCcCeEEEec
Confidence 3456788874 566666666778888888754322110 01113456788888777776654
No 270
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=89.38 E-value=3.9 Score=28.24 Aligned_cols=58 Identities=9% Similarity=-0.071 Sum_probs=41.1
Q ss_pred ccCeeeecCCCCceeeeeeecc--c-----------------------------ccEEEEEEcCCCcEEEEEeCCC----
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQH--T-----------------------------HQVLHVSFSHNGRYFATCSKDG---- 49 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~--~-----------------------------~~v~~i~~s~~~~~l~s~~~d~---- 49 (111)
.++.+.-+|..+|+.+-.+... . ..-..+.++|+..++..+..++
T Consensus 181 ~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~ 260 (689)
T 1yiq_A 181 VRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWD 260 (689)
T ss_dssp CBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccc
Confidence 4789999999999887665410 0 0112567888888877777665
Q ss_pred ---------------eEEEEecCCCcee
Q psy8803 50 ---------------YILVWTSSYPSKV 62 (111)
Q Consensus 50 ---------------~i~iw~~~~~~~~ 62 (111)
.+..+|.++++..
T Consensus 261 ~~~~~~~~gd~~y~~~v~AlD~~TG~~~ 288 (689)
T 1yiq_A 261 PKWRSQAKGDNLFLSSIVAVNADTGEYV 288 (689)
T ss_dssp HHHHHTTCSCCTTTTEEEEEETTTCCEE
T ss_pred cCCCCCCCCCceeeeeEEEEEccCCcee
Confidence 3899999987654
No 271
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=88.89 E-value=2.6 Score=25.57 Aligned_cols=67 Identities=13% Similarity=0.106 Sum_probs=43.3
Q ss_pred ceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEE
Q psy8803 17 IVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLV 90 (111)
Q Consensus 17 ~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 90 (111)
.+.+..+.. ......++|+++++++++-..++.|..+|......... ... .....+++.+++..+++
T Consensus 22 ~~~~~~~p~-~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~-----~~~-~~p~gia~~~dG~l~va 88 (306)
T 2p4o_A 22 AKIITSFPV-NTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHA-----TVE-GKVSGLAFTSNGDLVAT 88 (306)
T ss_dssp EEEEEEECT-TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEE-----ECS-SEEEEEEECTTSCEEEE
T ss_pred ceEeEeCCC-CCCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEE-----eCC-CCceeEEEcCCCcEEEE
Confidence 344445532 24677899999999888877888999998875432211 111 23567888888875444
No 272
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=88.82 E-value=3.4 Score=26.75 Aligned_cols=92 Identities=11% Similarity=0.096 Sum_probs=46.4
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCCCc-EEEEEeCCC----eEEEEecCCCceeeeecceeeeecCceeeEEE
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGR-YFATCSKDG----YILVWTSSYPSKVKYSHDMKTFSWKYTQYSQF 81 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~-~l~s~~~d~----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (111)
+.|+.+|...+... .+.........++|+++++ ++++-..++ .+...+......... .+. .......+++
T Consensus 159 ~~I~~id~~~~~v~-~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~--~l~--~~~~p~giav 233 (430)
T 3tc9_A 159 HPTRLIDFEKEYVS-TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVIT--ELT--KGQNCNGAET 233 (430)
T ss_dssp EEEEEEETTTTEEE-EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEE--EEE--ECSSCCCEEE
T ss_pred CcEEEEECCCCEEE-EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeee--eec--cCCCceEEEE
Confidence 45666676654432 3333445678999999998 444443222 233333322111000 011 1234567888
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+|++..++++- ...+.|..++.
T Consensus 234 dp~~g~lyv~d-------~~~~~V~~~~~ 255 (430)
T 3tc9_A 234 HPINGELYFNS-------WNAGQVFRYDF 255 (430)
T ss_dssp CTTTCCEEEEE-------TTTTEEEEEET
T ss_pred eCCCCEEEEEE-------CCCCEEEEEEC
Confidence 88444454543 33455666654
No 273
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=88.78 E-value=2.9 Score=25.89 Aligned_cols=73 Identities=11% Similarity=-0.044 Sum_probs=44.0
Q ss_pred cccEEEEEEcCC-CcEEEEE-eCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCce
Q psy8803 27 THQVLHVSFSHN-GRYFATC-SKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGE 104 (111)
Q Consensus 27 ~~~v~~i~~s~~-~~~l~s~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (111)
......++++|. +.++.+- +..+.|...++......... .......+.++++|++..|..+- ...+.
T Consensus 121 ~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~----~~~l~~Pnglavd~~~~~lY~aD-------~~~~~ 189 (318)
T 3sov_A 121 LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII----NSEIYWPNGLTLDYEEQKLYWAD-------AKLNF 189 (318)
T ss_dssp CSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEE----CSSCSCEEEEEEETTTTEEEEEE-------TTTTE
T ss_pred CCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEE----ECCCCCccEEEEeccCCEEEEEE-------CCCCE
Confidence 345678899986 5555554 34578888887653322110 01123457889998777776654 44566
Q ss_pred EEEeec
Q psy8803 105 IAVFSL 110 (111)
Q Consensus 105 i~iw~~ 110 (111)
|..+|+
T Consensus 190 I~~~d~ 195 (318)
T 3sov_A 190 IHKSNL 195 (318)
T ss_dssp EEEEET
T ss_pred EEEEcC
Confidence 777664
No 274
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=88.75 E-value=4.9 Score=28.48 Aligned_cols=93 Identities=8% Similarity=-0.071 Sum_probs=50.1
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCC-CcEEEEEe-CCCeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHN-GRYFATCS-KDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
+.|.+.++........+.........|+++|. +.++.+-. ....|...++........ ........+.+++.+.
T Consensus 493 ~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~l----v~~~l~~P~GLavD~~ 568 (791)
T 3m0c_C 493 GTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL----VTENIQWPNGITLDLL 568 (791)
T ss_dssp TEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEE----ECSSCSCEEEEEEETT
T ss_pred CeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEE----EeCCCCCceEEEEecC
Confidence 44555555422222222223345788999986 55665543 336788888875433221 1111234567888877
Q ss_pred CCEEEEeccccCCccccCceEEEeec
Q psy8803 85 DTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
...|+.+- ...+.|...++
T Consensus 569 ~~~LYwaD-------~~~~~I~~~d~ 587 (791)
T 3m0c_C 569 SGRLYWVD-------SKLHSISSIDV 587 (791)
T ss_dssp TTEEEEEE-------TTTTEEEEEET
T ss_pred CCeEEEEe-------CCCCcEEEEec
Confidence 77766654 33455666554
No 275
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=88.66 E-value=4.5 Score=27.92 Aligned_cols=93 Identities=5% Similarity=-0.037 Sum_probs=54.6
Q ss_pred eeeecCCCC----ceeeeeeecccccEEEEEEcCCCcEEEEEe-CCCeEEEEecCCC------ceeeee----cceeeee
Q psy8803 8 YKRLDYHTP----IVETEVLTQHTHQVLHVSFSHNGRYFATCS-KDGYILVWTSSYP------SKVKYS----HDMKTFS 72 (111)
Q Consensus 8 ~i~iw~~~~----~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~-~d~~i~iw~~~~~------~~~~~~----~~~~~~~ 72 (111)
.+.+-|.+. +..+..+-.-....-.+..+|||++++.++ .+.++.++|++.. ...... ..+. +.
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~G 377 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LG 377 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CC
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CC
Confidence 356666654 322222222233345678999998877665 6788999998741 111100 0111 11
Q ss_pred cCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 73 WKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 73 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
-.....+|.+++ ...++- --|++|.-||+
T Consensus 378 -lGPlHt~Fd~~G-~aYTtl-------fidSqvvkWni 406 (638)
T 3sbq_A 378 -LGPLHTTFDGRG-NAYTTL-------FIDSQVVKWNM 406 (638)
T ss_dssp -SCEEEEEECSSS-EEEEEE-------TTTTEEEEEEH
T ss_pred -CcccEEEECCCC-ceEeee-------eecceEEEEec
Confidence 234577899888 555655 67889999986
No 276
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=88.57 E-value=2.6 Score=25.31 Aligned_cols=60 Identities=15% Similarity=0.198 Sum_probs=38.4
Q ss_pred cEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee---eecceeeeecCceeeEEEccCCCEEEE
Q psy8803 29 QVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK---YSHDMKTFSWKYTQYSQFNESDTLLLV 90 (111)
Q Consensus 29 ~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~ 90 (111)
.+..++|+|++.+.+. .++.+.-.+..+..... ....+-...|.....+.|.|++...++
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav 104 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV 104 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe
Confidence 6679999999998888 56776666654321111 111233335555668889988887766
No 277
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=88.52 E-value=3.5 Score=28.15 Aligned_cols=84 Identities=8% Similarity=-0.141 Sum_probs=49.0
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
.+|.+.-||..+++.+-.... ......-.....+.+++.++.|+.++.+|.++++.+-...--... ....+.+..+
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~---~~~P~~y~~~ 526 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGA---IGYPMTYTHK 526 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC---CSCCEEEEET
T ss_pred CcCeEEEEECCCCCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCc---EeccEEEEeC
Confidence 458899999999887665531 111111112224667777899999999999998766421110001 1123455557
Q ss_pred CCEEEEec
Q psy8803 85 DTLLLVSG 92 (111)
Q Consensus 85 ~~~~~~~~ 92 (111)
+..++++.
T Consensus 527 G~qyv~~~ 534 (599)
T 1w6s_A 527 GTQYVAIY 534 (599)
T ss_dssp TEEEEEEE
T ss_pred CEEEEEEE
Confidence 76555544
No 278
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=88.28 E-value=3.5 Score=26.21 Aligned_cols=80 Identities=11% Similarity=-0.071 Sum_probs=43.1
Q ss_pred eeeecCCCCceeeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCC
Q psy8803 8 YKRLDYHTPIVETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDT 86 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 86 (111)
.|+..++....... +.........++|++. +.++.+-...+.|..+++........ ..........+++.+.+.
T Consensus 97 ~I~~i~~~~~~~~~-~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~----~~~~~~~p~glavd~~~g 171 (386)
T 3v65_B 97 DIRQVLPHRSEYTL-LLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV----VSTGLESPGGLAVDWVHD 171 (386)
T ss_dssp CEEEECTTSCCCEE-EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE----ECSSCSCCCCEEEETTTT
T ss_pred cceeeccCCCcEEE-EecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE----EeCCCCCccEEEEEeCCC
Confidence 34444554333222 2223345788999975 55666666778898898876543221 000112334567776665
Q ss_pred EEEEec
Q psy8803 87 LLLVSG 92 (111)
Q Consensus 87 ~~~~~~ 92 (111)
.|+.+-
T Consensus 172 ~lY~~d 177 (386)
T 3v65_B 172 KLYWTD 177 (386)
T ss_dssp EEEEEE
T ss_pred eEEEEc
Confidence 655543
No 279
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=88.10 E-value=4.5 Score=27.29 Aligned_cols=22 Identities=0% Similarity=-0.526 Sum_probs=15.8
Q ss_pred ccccCeeeecCCCCceeeeeee
Q psy8803 3 SWYEEYKRLDYHTPIVETEVLT 24 (111)
Q Consensus 3 ~~~d~~i~iw~~~~~~~~~~~~ 24 (111)
...+|.+...|..+++.+....
T Consensus 322 ~~~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 322 IDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp ECTTSEEEEEETTTCCEEEEEE
T ss_pred eCCCcEEEEEECCCCCEEeeec
Confidence 3457788888988887765543
No 280
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=87.85 E-value=3.8 Score=26.20 Aligned_cols=93 Identities=8% Similarity=-0.055 Sum_probs=51.6
Q ss_pred CeeeecCCCCceeeeeeecccccEEEEEEcCC-CcEEEEE-eCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 7 EYKRLDYHTPIVETEVLTQHTHQVLHVSFSHN-GRYFATC-SKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
+.|.+.+.........+.........++++|. +.++.+- +....|...++......... .......+.+++++.
T Consensus 181 ~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~----~~~l~~P~glavd~~ 256 (400)
T 3p5b_L 181 GTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV----TENIQWPNGITLDLL 256 (400)
T ss_dssp TEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE----CSSCSCEEEEEEETT
T ss_pred CeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE----ECCCCceEEEEEEeC
Confidence 45555555533222222223345688999985 5555554 33467888887654322210 011234567888887
Q ss_pred CCEEEEeccccCCccccCceEEEeec
Q psy8803 85 DTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
...|..+- ...+.|...|+
T Consensus 257 ~~~lY~aD-------~~~~~I~~~d~ 275 (400)
T 3p5b_L 257 SGRLYWVD-------SKLHSISSIDV 275 (400)
T ss_dssp TTEEEEEE-------TTTTEEEEEET
T ss_pred CCEEEEEE-------CCCCEEEEEeC
Confidence 77776654 44556766664
No 281
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=86.76 E-value=4.4 Score=25.72 Aligned_cols=64 Identities=6% Similarity=-0.036 Sum_probs=40.3
Q ss_pred cccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee--eecceeeeecCceeeEEEccC---CCEEEE
Q psy8803 27 THQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK--YSHDMKTFSWKYTQYSQFNES---DTLLLV 90 (111)
Q Consensus 27 ~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~---~~~~~~ 90 (111)
-..-..|+|.|||+++++--..++|.+++...+.... ....+..........++++|+ +..+.+
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv 99 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYA 99 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEE
Confidence 4566899999999988887668899998765543321 111122212234567899885 344444
No 282
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=85.94 E-value=5 Score=25.64 Aligned_cols=97 Identities=7% Similarity=0.001 Sum_probs=55.7
Q ss_pred cccCeeeecCCC-------CceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCC-----Cceeeeecceeee
Q psy8803 4 WYEEYKRLDYHT-------PIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSY-----PSKVKYSHDMKTF 71 (111)
Q Consensus 4 ~~d~~i~iw~~~-------~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~-----~~~~~~~~~~~~~ 71 (111)
..+|.+..|++. +.+.+.+|.- .+.+..+..++....|..+-++.-|-.++.+. ...+.... ...+
T Consensus 150 ~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~-~g~l 227 (355)
T 3amr_A 150 GKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRAD-GRHL 227 (355)
T ss_dssp CSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBS-SSSB
T ss_pred CCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEec-CCcc
Confidence 445777777772 3355666653 45778888998888888888886655555432 12221100 0000
Q ss_pred ecCceeeEEE--ccCCC-EEEEeccccCCccccCceEEEeec
Q psy8803 72 SWKYTQYSQF--NESDT-LLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 72 ~~~~~~~v~~--~~~~~-~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
. .-+..++. .+++. +++++. ..++...+||.
T Consensus 228 ~-aDvEGLai~~~~~g~gyLivSs-------QG~~s~~Vydr 261 (355)
T 3amr_A 228 T-RDIEGLTIYYAADGKGYLMASS-------QGNSSYAIYDR 261 (355)
T ss_dssp C-SCEEEEEEEECGGGCEEEEEEE-------GGGTEEEEEES
T ss_pred c-cCcceEEEEecCCCCEEEEEEc-------CCCCEEEEEEC
Confidence 0 11234444 34444 677776 66778888886
No 283
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=85.31 E-value=5.3 Score=25.32 Aligned_cols=89 Identities=10% Similarity=0.023 Sum_probs=52.7
Q ss_pred cccccCeeeecCCCCceeee-eeec----c--cccEEEEEE---cCCCcEEEEEe-------------CCCeEEEEecC-
Q psy8803 2 KSWYEEYKRLDYHTPIVETE-VLTQ----H--THQVLHVSF---SHNGRYFATCS-------------KDGYILVWTSS- 57 (111)
Q Consensus 2 ~~~~d~~i~iw~~~~~~~~~-~~~~----~--~~~v~~i~~---s~~~~~l~s~~-------------~d~~i~iw~~~- 57 (111)
++.+.++|..|+...+.... .+.+ . ...+..+.| .|++++++... .+..+..+|+.
T Consensus 30 s~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~ 109 (334)
T 2p9w_A 30 SNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPL 109 (334)
T ss_dssp EETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSC
T ss_pred EeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCc
Confidence 34578999999987543222 3322 1 124689999 68888888644 25789999998
Q ss_pred --CCceeeeec--ceeee-------ecCceeeEEEccCCCEEEE
Q psy8803 58 --YPSKVKYSH--DMKTF-------SWKYTQYSQFNESDTLLLV 90 (111)
Q Consensus 58 --~~~~~~~~~--~~~~~-------~~~~~~~v~~~~~~~~~~~ 90 (111)
+++...+.. .+... .....+.++..++++.+++
T Consensus 110 ~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt 153 (334)
T 2p9w_A 110 SENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVA 153 (334)
T ss_dssp CTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEE
T ss_pred CCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEe
Confidence 554433211 01000 1124567778877776653
No 284
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=85.12 E-value=6.6 Score=26.28 Aligned_cols=73 Identities=5% Similarity=-0.032 Sum_probs=43.6
Q ss_pred EEEEEEcC-CCcEEEEEeCCCeEEEEecC-------CCce-eee-------ecceeeee-cCceeeEEEccCCCEEEEec
Q psy8803 30 VLHVSFSH-NGRYFATCSKDGYILVWTSS-------YPSK-VKY-------SHDMKTFS-WKYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 30 v~~i~~s~-~~~~l~s~~~d~~i~iw~~~-------~~~~-~~~-------~~~~~~~~-~~~~~~v~~~~~~~~~~~~~ 92 (111)
...++.+| ++.++++-..++.|..+|+. ++.. ... ...+.... -.....++|+|++..+.++-
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD 328 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGV 328 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEe
Confidence 35677899 46777777788899999987 4332 000 00111110 12246799999998665654
Q ss_pred cccCCccccCceEEEee
Q psy8803 93 VHFGTPQSTSGEIAVFS 109 (111)
Q Consensus 93 ~~~~~~~~~~~~i~iw~ 109 (111)
...+.|+.++
T Consensus 329 -------~~~h~I~kid 338 (496)
T 3kya_A 329 -------INNHYFMRSD 338 (496)
T ss_dssp -------TTTTEEEEEE
T ss_pred -------CCCCEEEEEe
Confidence 4456676654
No 285
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=84.82 E-value=5.2 Score=24.82 Aligned_cols=58 Identities=7% Similarity=-0.145 Sum_probs=37.0
Q ss_pred cccCeeeecCCCCceeeeeeecc---------cccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCcee
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQH---------THQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKV 62 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~---------~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~ 62 (111)
..++.+..+|..+++.+-..... ...+... ...++..+..++.++.+..+|.++++..
T Consensus 60 ~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~ 126 (376)
T 3q7m_A 60 DRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVA 126 (376)
T ss_dssp CTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEE
T ss_pred cCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEE
Confidence 45678888999888876555432 1122221 1223555666777899999999887654
No 286
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=84.80 E-value=4.7 Score=24.26 Aligned_cols=59 Identities=14% Similarity=0.211 Sum_probs=40.0
Q ss_pred EEEEEcCCCcEEEEEeCCCeEEEEecCCCceee---eecceeeeecCceeeEEEccCCCEEEEe
Q psy8803 31 LHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK---YSHDMKTFSWKYTQYSQFNESDTLLLVS 91 (111)
Q Consensus 31 ~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 91 (111)
.++.|.|+|.+.++ .|+.|.-++..+..... ....|-...|..+..+.|.|++...++.
T Consensus 91 ~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 91 QFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp SEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred eEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 78899999999988 45888877754321111 1123334456677889999999887764
No 287
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=83.84 E-value=8.2 Score=26.34 Aligned_cols=71 Identities=10% Similarity=0.126 Sum_probs=36.8
Q ss_pred EEEEcC-CCcEEEEEeCCC-----------eEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCcc
Q psy8803 32 HVSFSH-NGRYFATCSKDG-----------YILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQ 99 (111)
Q Consensus 32 ~i~~s~-~~~~l~s~~~d~-----------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 99 (111)
..++.+ ++++++.|+.+. .+.+||..+..-.... ............+++.+++..+++-|
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~-~~~~~~~~~~~~~~~~~~g~lyv~GG------- 261 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRT-VTVTKHDMFCPGISMDGNGQIVVTGG------- 261 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCE-EEECSCCCSSCEEEECTTSCEEEECS-------
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCc-ccCCCCCCccccccCCCCCCEEEeCC-------
Confidence 456666 888888887543 5778888764321100 01000001111345555665554433
Q ss_pred ccCceEEEeec
Q psy8803 100 STSGEIAVFSL 110 (111)
Q Consensus 100 ~~~~~i~iw~~ 110 (111)
..+..+.+||.
T Consensus 262 ~~~~~v~~yd~ 272 (656)
T 1k3i_A 262 NDAKKTSLYDS 272 (656)
T ss_dssp SSTTCEEEEEG
T ss_pred CCCCceEEecC
Confidence 23446888885
No 288
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=82.41 E-value=7.1 Score=24.55 Aligned_cols=63 Identities=13% Similarity=0.107 Sum_probs=37.1
Q ss_pred ccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccC---CCEEEEec
Q psy8803 28 HQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES---DTLLLVSG 92 (111)
Q Consensus 28 ~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~ 92 (111)
.....++|.|+++++++-. ++.|.+++. .+........+..........++++|+ +..+.++.
T Consensus 29 ~~P~~ia~~pdG~l~V~e~-~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~ 94 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTER-PGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYA 94 (354)
T ss_dssp SCEEEEEEEETTEEEEEET-TTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCCeEEEEcCCCeEEEEeC-CCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEE
Confidence 4568999999999777654 588988873 333111100111111134567899997 55665544
No 289
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=82.21 E-value=4.4 Score=28.55 Aligned_cols=34 Identities=12% Similarity=0.300 Sum_probs=27.0
Q ss_pred ccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee
Q psy8803 28 HQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 28 ~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~ 63 (111)
..|.++.+ +..++++-+.|+++|+|+++++.+..
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~ 255 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQ 255 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEE
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEE
Confidence 34666655 47799999999999999999987554
No 290
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=81.04 E-value=1.6 Score=32.04 Aligned_cols=34 Identities=18% Similarity=0.074 Sum_probs=26.8
Q ss_pred EEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee
Q psy8803 30 VLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK 63 (111)
Q Consensus 30 v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~ 63 (111)
+.++...++..++++-+.|+++++|++.++.+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~ 273 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVE 273 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEE
Confidence 3445556677899999999999999999876554
No 291
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=80.65 E-value=2.7 Score=29.12 Aligned_cols=31 Identities=10% Similarity=0.005 Sum_probs=21.1
Q ss_pred ccEEEEEEcCCC-cEEEEEeCCCeEEEEecCC
Q psy8803 28 HQVLHVSFSHNG-RYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 28 ~~v~~i~~s~~~-~~l~s~~~d~~i~iw~~~~ 58 (111)
..+..++|++++ .++.+-...+.|..+++..
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g 437 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDR 437 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCC
Confidence 456678898864 4555545567888888764
No 292
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=78.98 E-value=14 Score=25.79 Aligned_cols=86 Identities=7% Similarity=-0.072 Sum_probs=45.8
Q ss_pred ccCeeeecCCCCceeeeeee--------cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCce
Q psy8803 5 YEEYKRLDYHTPIVETEVLT--------QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYT 76 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~--------~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 76 (111)
.++.+..|+..+++...... .....|.++..++++++|-.|..++-+..+|..++...........+....+
T Consensus 375 ~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v 454 (795)
T 4a2l_A 375 NDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENV 454 (795)
T ss_dssp SSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCE
T ss_pred CCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCee
Confidence 45567777776554322111 1235788998888888344455556688998876554332110000111234
Q ss_pred eeEEEccCCCEEEE
Q psy8803 77 QYSQFNESDTLLLV 90 (111)
Q Consensus 77 ~~v~~~~~~~~~~~ 90 (111)
.++...+++...+.
T Consensus 455 ~~i~~d~~g~lwig 468 (795)
T 4a2l_A 455 YAILPDGEGNLWLG 468 (795)
T ss_dssp EEEEECSSSCEEEE
T ss_pred EEEEECCCCCEEEE
Confidence 45555555554443
No 293
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=78.70 E-value=14 Score=25.51 Aligned_cols=58 Identities=5% Similarity=-0.117 Sum_probs=39.4
Q ss_pred ccCeeeecCCCCceeeeeeecc--c-----------------------------ccEEEEEEcCCCcEEEEEeCCC----
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQH--T-----------------------------HQVLHVSFSHNGRYFATCSKDG---- 49 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~--~-----------------------------~~v~~i~~s~~~~~l~s~~~d~---- 49 (111)
.++.+..+|..+|+.+-.+... . .....++++++..++..+..++
T Consensus 176 ~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~ 255 (668)
T 1kv9_A 176 VRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWN 255 (668)
T ss_dssp CBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccc
Confidence 3689999999999887766421 0 0011367888777777766555
Q ss_pred ---------------eEEEEecCCCcee
Q psy8803 50 ---------------YILVWTSSYPSKV 62 (111)
Q Consensus 50 ---------------~i~iw~~~~~~~~ 62 (111)
.|..+|.++++..
T Consensus 256 ~~~~~~~~gd~l~~~~v~AlD~~tG~~~ 283 (668)
T 1kv9_A 256 REVRSPGGGDNLYLSSILAIRPDTGKLA 283 (668)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEE
T ss_pred cCCCCCCCCCceeeeeEEEEcCCCCcee
Confidence 3888998887654
No 294
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=78.62 E-value=9.8 Score=23.85 Aligned_cols=63 Identities=10% Similarity=0.081 Sum_probs=35.9
Q ss_pred ccEEEEEEcCCCc-EEEEEeCCCeEEEEecCCCce--eeeecceeeeecCceeeEEEccC---CCEEEEe
Q psy8803 28 HQVLHVSFSHNGR-YFATCSKDGYILVWTSSYPSK--VKYSHDMKTFSWKYTQYSQFNES---DTLLLVS 91 (111)
Q Consensus 28 ~~v~~i~~s~~~~-~l~s~~~d~~i~iw~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~ 91 (111)
.....|+|.|+|+ ++++- ..+.|.+++...... ......+..........++++|+ +..+.++
T Consensus 18 ~~P~~i~~~pdG~~l~V~e-~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITL-RGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp SSEEEEEECSTTCCEEEEE-TTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred CCcEEEEEcCCCCEEEEEe-CCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEE
Confidence 4568999999999 77655 468898887532111 11000111111123467899986 5555554
No 295
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=78.38 E-value=11 Score=24.24 Aligned_cols=56 Identities=7% Similarity=-0.089 Sum_probs=41.9
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCc
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPS 60 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~ 60 (111)
.-|.+.+||+.++.++.+-+-....|..-+-+....-++.-...|.+.--.++...
T Consensus 279 K~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 279 KYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTT
T ss_pred CCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECccc
Confidence 35899999999999988877677777766666666666677778887766666543
No 296
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=78.24 E-value=9 Score=23.18 Aligned_cols=60 Identities=10% Similarity=0.071 Sum_probs=38.4
Q ss_pred EEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEc---cCCCEEEEec
Q psy8803 30 VLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFN---ESDTLLLVSG 92 (111)
Q Consensus 30 v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~~~~ 92 (111)
...++++++|+++++....+.|.+++... ...... .+. ........++|. |++..++++.
T Consensus 214 P~gi~vd~dG~l~va~~~~~~V~~~~~~G-~~~~~~-~~~-~~~~~p~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 214 IDDFAFDVEGNLYGATHIYNSVVRIAPDR-STTIIA-QAE-QGVIGSTAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp CSSEEEBTTCCEEEECBTTCCEEEECTTC-CEEEEE-CGG-GTCTTEEEEEECCSTTTTTEEEEEE
T ss_pred CCCeEECCCCCEEEEeCCCCeEEEECCCC-CEEEEe-ecc-cccCCceEEEEecccCCCCEEEEEC
Confidence 45678899999888877778899998763 322110 111 111345678998 7777776654
No 297
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=77.92 E-value=5 Score=26.55 Aligned_cols=32 Identities=13% Similarity=0.161 Sum_probs=27.7
Q ss_pred cccEEEEEEcCC---CcEEEEEeCCCeEEEEecCC
Q psy8803 27 THQVLHVSFSHN---GRYFATCSKDGYILVWTSSY 58 (111)
Q Consensus 27 ~~~v~~i~~s~~---~~~l~s~~~d~~i~iw~~~~ 58 (111)
...|..+.|+|- +..|+.-..|..|++||+..
T Consensus 124 ~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 124 KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred CCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 467999999995 56899999999999999975
No 298
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=77.43 E-value=15 Score=25.21 Aligned_cols=94 Identities=14% Similarity=0.021 Sum_probs=48.2
Q ss_pred CeeeecCCCCce-eeeeeecccccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccC
Q psy8803 7 EYKRLDYHTPIV-ETEVLTQHTHQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNES 84 (111)
Q Consensus 7 ~~i~iw~~~~~~-~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 84 (111)
..|+.-++.... ....+.........++|++. +.++.+=...++|..+++....... .+..........+++.+.
T Consensus 18 ~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~---~v~~~~~~~P~GlAvD~~ 94 (619)
T 3s94_A 18 RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ---NVVVSGLLSPDGLACDWL 94 (619)
T ss_dssp SBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CE---EEECSSCSCEEEEEEETT
T ss_pred ccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceE---EEEeCCCCCcCeEEEEec
Confidence 456666665432 12222223456789999985 5555555567788888876542111 011111134567788876
Q ss_pred CCEEEEeccccCCccccCceEEEeec
Q psy8803 85 DTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+..++.+- ...+.|.+.++
T Consensus 95 ~~~ly~~d-------~~~~~I~v~~~ 113 (619)
T 3s94_A 95 GEKLYWTD-------SETNRIEVSNL 113 (619)
T ss_dssp TTEEEEEE-------TTTTEEEEEET
T ss_pred CCEEEEEe-------CCCCEEEEEEC
Confidence 66666654 44566766654
No 299
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=76.85 E-value=13 Score=24.35 Aligned_cols=65 Identities=12% Similarity=0.081 Sum_probs=39.0
Q ss_pred ccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceee--eecceeee--ecCceeeEEEccC---CCEEEEec
Q psy8803 28 HQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVK--YSHDMKTF--SWKYTQYSQFNES---DTLLLVSG 92 (111)
Q Consensus 28 ~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~--~~~~~~~~--~~~~~~~v~~~~~---~~~~~~~~ 92 (111)
.....|+|.|+|+++++-...+.|.+++..++.... ....+... .-.....++|+|+ +..+.++.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 456799999999988887655678888765443221 11111100 0123457899996 55665554
No 300
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=74.64 E-value=12 Score=22.65 Aligned_cols=40 Identities=18% Similarity=0.265 Sum_probs=29.7
Q ss_pred eeecccccEEEEEEcCCC-cEEEEEeCCCeEEEEecCCCcee
Q psy8803 22 VLTQHTHQVLHVSFSHNG-RYFATCSKDGYILVWTSSYPSKV 62 (111)
Q Consensus 22 ~~~~~~~~v~~i~~s~~~-~~l~s~~~d~~i~iw~~~~~~~~ 62 (111)
.+.+-.+.+..++|+|++ .+++....++.|...|.. +...
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~ 61 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLI 61 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEE
Confidence 344566789999999975 466667788889999887 4433
No 301
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=73.75 E-value=13 Score=22.63 Aligned_cols=62 Identities=8% Similarity=0.125 Sum_probs=35.0
Q ss_pred ccEEEEEEcC-CCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEcc-CCCEEEE
Q psy8803 28 HQVLHVSFSH-NGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNE-SDTLLLV 90 (111)
Q Consensus 28 ~~v~~i~~s~-~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~ 90 (111)
.....+++++ +++++++... ..+..+|.....................+.+++.+ ++...++
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~-~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~ 143 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCY-YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFT 143 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETT-TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEE
T ss_pred CCCceEEEcCCCCcEEEEECC-CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEE
Confidence 3578899997 6776665443 45778887654322111111111223456788898 7765554
No 302
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=72.53 E-value=17 Score=23.59 Aligned_cols=74 Identities=5% Similarity=0.044 Sum_probs=46.4
Q ss_pred EEEEEE---------cCCCcEEEEEeCCCeEEEEecCCCceeeeecc-------------eeeeecCceeeEEEccCCCE
Q psy8803 30 VLHVSF---------SHNGRYFATCSKDGYILVWTSSYPSKVKYSHD-------------MKTFSWKYTQYSQFNESDTL 87 (111)
Q Consensus 30 v~~i~~---------s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~-------------~~~~~~~~~~~v~~~~~~~~ 87 (111)
-..+++ .++++++++-..+.+|+.++... ........ .....+.....+++.|....
T Consensus 337 P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~G-~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~ 415 (433)
T 4hw6_A 337 PNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPEG-RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKC 415 (433)
T ss_dssp EEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTTS-EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTE
T ss_pred CccEEEEccccccccCCCCcEEEEECCCCEEEEECCCC-CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCE
Confidence 456888 77788888877888999998643 22211100 00112344678999966666
Q ss_pred EEEeccccCCccccCceEEEeecC
Q psy8803 88 LLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 88 ~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
|+++- ...+.|+..+++
T Consensus 416 lyVaD-------~~n~rIr~i~~e 432 (433)
T 4hw6_A 416 FYIGD-------CDNHRVRKIAPE 432 (433)
T ss_dssp EEEEE-------GGGTEEEEEEEC
T ss_pred EEEEe-------CCCCEEEEEecC
Confidence 66654 556678887764
No 303
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=70.50 E-value=18 Score=23.14 Aligned_cols=95 Identities=9% Similarity=0.040 Sum_probs=51.9
Q ss_pred cccCeeeecCCCCceeeeeeecccccEEEEEEcCC----Cc---E-EEEEeC--CCeEEEEecC--CCceeeeecce--e
Q psy8803 4 WYEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHN----GR---Y-FATCSK--DGYILVWTSS--YPSKVKYSHDM--K 69 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~----~~---~-l~s~~~--d~~i~iw~~~--~~~~~~~~~~~--~ 69 (111)
...+.+.+||+ +++.+..+.. +.+..+..-|+ ++ + +++.-. +.++.+|++. ... +.....+ .
T Consensus 47 ~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~p 122 (355)
T 3amr_A 47 NKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDPDHP 122 (355)
T ss_dssp ETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCTTSC
T ss_pred cCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeeccccccC
Confidence 44578999999 6888887753 45666665552 22 2 333333 5789999773 332 3221111 0
Q ss_pred -eeecCceeeEEE--ccC-CC-EEEEeccccCCccccCceEEEeec
Q psy8803 70 -TFSWKYTQYSQF--NES-DT-LLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 70 -~~~~~~~~~v~~--~~~-~~-~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.........+++ +|. +. +++++ ..++.+..|++
T Consensus 123 v~t~~~~pyGlcly~~~~~g~~yafV~--------~k~G~~~q~~l 160 (355)
T 3amr_A 123 IATAINEVYGFTLYHSQKTGKYYAMVT--------GKEGEFEQYEL 160 (355)
T ss_dssp EECCCSSCCCEEEEECTTTCCEEEEEE--------CSSSEEEEEEE
T ss_pred cCCCCCCeeEEEEEecCCCCcEEEEEE--------CCCCeEEEEEE
Confidence 011123345666 664 33 34443 45678888876
No 304
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=67.60 E-value=29 Score=24.26 Aligned_cols=83 Identities=6% Similarity=-0.085 Sum_probs=45.5
Q ss_pred ccCeeeecCCCCceeeeeee-----cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecc--eeeeecCcee
Q psy8803 5 YEEYKRLDYHTPIVETEVLT-----QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHD--MKTFSWKYTQ 77 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~-----~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~--~~~~~~~~~~ 77 (111)
+++.+..+|..+++.. .+. .....|.++...+++++.+... + -+.+|+..+......... ...+....+.
T Consensus 425 ~~~Gl~~~d~~~~~~~-~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 501 (795)
T 4a2l_A 425 HAGGLSILHRNSGQVE-NFNQRNSQLVNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQRSFTTIEKEKDGTPVVSKQIT 501 (795)
T ss_dssp TTTEEEEEETTTCCEE-EECTTTSCCSCSCEEEEEECSSSCEEEEES-S-CEEEEETTTTEEEECCBCTTCCBCCCCCEE
T ss_pred CcCceeEEeCCCCcEE-EeecCCCCcCCCeeEEEEECCCCCEEEEec-C-ceeEEeCCCCeEEEccccccccccCCceEE
Confidence 4456777777655432 222 1345789999988888776654 3 478888876543321110 0011113345
Q ss_pred eEEEccCCCEEEE
Q psy8803 78 YSQFNESDTLLLV 90 (111)
Q Consensus 78 ~v~~~~~~~~~~~ 90 (111)
.+...+++...+.
T Consensus 502 ~i~~d~~g~lWig 514 (795)
T 4a2l_A 502 TLFRDSHKRLWIG 514 (795)
T ss_dssp EEEECTTCCEEEE
T ss_pred EEEECCCCCEEEE
Confidence 5666666655443
No 305
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=66.57 E-value=19 Score=21.75 Aligned_cols=88 Identities=8% Similarity=-0.037 Sum_probs=52.0
Q ss_pred cccCeeeecCCCCceeeeeee-cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCcee---e-eeccee-eeecCcee
Q psy8803 4 WYEEYKRLDYHTPIVETEVLT-QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKV---K-YSHDMK-TFSWKYTQ 77 (111)
Q Consensus 4 ~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~---~-~~~~~~-~~~~~~~~ 77 (111)
..++.|...|.. ++.+..+. +-....-.+++.+++.++++.-.+..+.++++...... . ...... ........
T Consensus 46 d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~E 124 (255)
T 3qqz_A 46 NKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFE 124 (255)
T ss_dssp ETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCE
T ss_pred CCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcc
Confidence 345566666766 66555553 11245678888888887776656778889987653321 1 110110 00112246
Q ss_pred eEEEccCCCEEEEec
Q psy8803 78 YSQFNESDTLLLVSG 92 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~ 92 (111)
.++++|....++++.
T Consensus 125 GLA~d~~~~~L~va~ 139 (255)
T 3qqz_A 125 GLAYSRQDHTFWFFK 139 (255)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred eEEEeCCCCEEEEEE
Confidence 899999887777755
No 306
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=65.76 E-value=28 Score=23.45 Aligned_cols=55 Identities=7% Similarity=-0.096 Sum_probs=42.0
Q ss_pred ccCeeeecCCCCceeeeeeecccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCC
Q psy8803 5 YEEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYP 59 (111)
Q Consensus 5 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~ 59 (111)
.-|.+.+||+.++.++.+-+-....|..-+-+....-++.-...|.+.--.+...
T Consensus 278 K~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 278 KYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred cCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccc
Confidence 3588999999999988877767777777767666667777778888776666554
No 307
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=64.08 E-value=26 Score=22.57 Aligned_cols=98 Identities=14% Similarity=0.134 Sum_probs=55.1
Q ss_pred cCeeeecCCCCceeeeeeecccccEEEEEEcCCCc-EEEEEeCCCeEEEEecCCCc-eeeeecceeeeecCceeeE--EE
Q psy8803 6 EEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNGR-YFATCSKDGYILVWTSSYPS-KVKYSHDMKTFSWKYTQYS--QF 81 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~~-~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~~~v--~~ 81 (111)
..+++++|+.+++.+..+. ....|....|-.+.. -|++. ..++-|+++... +.+-...-..+ ...|-+ .-
T Consensus 86 g~~LQiFnletK~klks~~-~~e~VvfWkWis~~~L~lVT~---taVyHWs~~~~s~P~kvFdR~~~L--~~~QIInY~~ 159 (365)
T 2xzh_A 86 GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISLNTVALVTD---NAVYHWSMEGESQPVKMFDRHSSL--AGCQIINYRT 159 (365)
T ss_dssp TTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSSEEEEEES---SEEEEEESSTTCCCEEEEECCGGG--TTCEEEEEEE
T ss_pred CCeEEEechHHhhhhccee-cCCccEEEEecCCCeEEEEcC---CcEEEEcccCCCCCceeeecchhc--ccceEEEEEE
Confidence 3579999999888777766 346888889965443 34443 479999997532 22100011111 123333 44
Q ss_pred ccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 82 NESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+++...++.+|-.-... ...|.+.+|..
T Consensus 160 d~~~kW~~l~GI~~~~~-~v~G~mQLYS~ 187 (365)
T 2xzh_A 160 DAKQKWLLLTGISAQQN-RVVGAMQLYSV 187 (365)
T ss_dssp CTTSCEEEEEEEEEETT-EEEEEEEEEET
T ss_pred CCCCCEEEEEeEeccCC-ccceeEEEEee
Confidence 56777777776432221 23455666543
No 308
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=61.89 E-value=27 Score=21.93 Aligned_cols=88 Identities=7% Similarity=-0.065 Sum_probs=46.1
Q ss_pred ccCeeeecCCCCce-eeeeee---cccccEEEEEEcCC----CcEEEEEeC---C----CeEEEEecCCC--ceeee---
Q psy8803 5 YEEYKRLDYHTPIV-ETEVLT---QHTHQVLHVSFSHN----GRYFATCSK---D----GYILVWTSSYP--SKVKY--- 64 (111)
Q Consensus 5 ~d~~i~iw~~~~~~-~~~~~~---~~~~~v~~i~~s~~----~~~l~s~~~---d----~~i~iw~~~~~--~~~~~--- 64 (111)
.+|.|++++. .++ .+..+. .-......|+++|+ +.++++-.. + ..|..++.... .....
T Consensus 47 ~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l 125 (354)
T 3a9g_A 47 RPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTL 125 (354)
T ss_dssp TTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEE
T ss_pred CCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEE
Confidence 3477777763 343 222211 12346789999997 666666542 3 46667766543 11100
Q ss_pred ecceeeeecCceeeEEEccCCCEEEEecc
Q psy8803 65 SHDMKTFSWKYTQYSQFNESDTLLLVSGV 93 (111)
Q Consensus 65 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 93 (111)
...+.....+....++|.|++..+++.+.
T Consensus 126 ~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~ 154 (354)
T 3a9g_A 126 IDGIPGAYIHNGGRIRFGPDGMLYITTGD 154 (354)
T ss_dssp EEEEECCSSCCCCCEEECTTSCEEEECCC
T ss_pred EEcCCCCCCcCCceEEECCCCcEEEEECC
Confidence 00011111123467999999987666553
No 309
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=55.99 E-value=48 Score=22.97 Aligned_cols=63 Identities=14% Similarity=0.084 Sum_probs=37.2
Q ss_pred cEEEEEEcCCCcEEEEEeCC------------CeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccc
Q psy8803 29 QVLHVSFSHNGRYFATCSKD------------GYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVH 94 (111)
Q Consensus 29 ~v~~i~~s~~~~~l~s~~~d------------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 94 (111)
..-.|.|+++|.+.++.... ..+..++...++..... ........+.++|+|++..|++.-.+
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl---~~P~~aEpnGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFM---VGPIGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEE---ECCTTCEEEEEEECTTSSEEEEEEES
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEE---eCCCCccccCCEECCCCCEEEEEEeC
Confidence 45578999999988744321 13444444444433211 11112346889999999988877544
No 310
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=55.55 E-value=48 Score=22.83 Aligned_cols=71 Identities=7% Similarity=-0.062 Sum_probs=43.1
Q ss_pred ccEEEEEEcCC-CcEEEEE-eCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceE
Q psy8803 28 HQVLHVSFSHN-GRYFATC-SKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEI 105 (111)
Q Consensus 28 ~~v~~i~~s~~-~~~l~s~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i 105 (111)
.....++++|. |.++.+- +....|...++......... . .....+.+++.+++..|..+- ...+.|
T Consensus 123 ~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~---~--~~~~P~GlalD~~~~~LY~aD-------~~~~~I 190 (628)
T 4a0p_A 123 DSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV---P--NVGRANGLTIDYAKRRLYWTD-------LDTNLI 190 (628)
T ss_dssp CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE---C--SCSSEEEEEEETTTTEEEEEE-------TTTTEE
T ss_pred CCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE---C--CCCCcceEEEccccCEEEEEE-------CCCCEE
Confidence 45678999984 6666654 33567777777654332211 1 123456788888777776654 445556
Q ss_pred EEeec
Q psy8803 106 AVFSL 110 (111)
Q Consensus 106 ~iw~~ 110 (111)
...|+
T Consensus 191 ~~~d~ 195 (628)
T 4a0p_A 191 ESSNM 195 (628)
T ss_dssp EEEET
T ss_pred EEEcC
Confidence 66654
No 311
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=54.33 E-value=46 Score=22.34 Aligned_cols=95 Identities=9% Similarity=0.091 Sum_probs=51.0
Q ss_pred CeeeecCCCCceeeeeeec---ccccEEEEEE-------cCCCcEEEEEeCCC-------eEEEEecCC-Ccee--eeec
Q psy8803 7 EYKRLDYHTPIVETEVLTQ---HTHQVLHVSF-------SHNGRYFATCSKDG-------YILVWTSSY-PSKV--KYSH 66 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~---~~~~v~~i~~-------s~~~~~l~s~~~d~-------~i~iw~~~~-~~~~--~~~~ 66 (111)
+.|++.|...+.....+.. .......++| +++++.|..+.... .+.+++... +... ....
T Consensus 162 ~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~ 241 (496)
T 3kya_A 162 KAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQ 241 (496)
T ss_dssp EEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEE
T ss_pred CeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccce
Confidence 3466667665544332322 1235789999 99998555554432 255664332 1111 0000
Q ss_pred ceeeeecCceeeEEEccCCCEEEEeccccCCccccCceEEEeec
Q psy8803 67 DMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 67 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
.+. .+.....++.+|++..|+++- ...+.|..+|+
T Consensus 242 ~v~--~~~~p~giavdp~~g~LYvtd-------~~~g~V~r~d~ 276 (496)
T 3kya_A 242 LIA--AYKQCNGATIHPINGELYFNS-------YEKGQVFRLDL 276 (496)
T ss_dssp EEE--EESCCCCEEECTTTCCEEEEE-------TTTTEEEEECH
T ss_pred eec--cCCCceEEEEcCCCCeEEEEE-------CCCCEEEEEec
Confidence 111 234456788899666666655 45666777764
No 312
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=51.19 E-value=42 Score=20.94 Aligned_cols=66 Identities=9% Similarity=0.053 Sum_probs=36.9
Q ss_pred cccEEEEEEcCC----CcEEEEEeCC-----CeEEEEecCCCceeee---eccee--eeecCceeeEEEccCCCEEEEec
Q psy8803 27 THQVLHVSFSHN----GRYFATCSKD-----GYILVWTSSYPSKVKY---SHDMK--TFSWKYTQYSQFNESDTLLLVSG 92 (111)
Q Consensus 27 ~~~v~~i~~s~~----~~~l~s~~~d-----~~i~iw~~~~~~~~~~---~~~~~--~~~~~~~~~v~~~~~~~~~~~~~ 92 (111)
......++|+|+ +.++++-..+ ..|..++......... ...+. ....+....++|.|++..+++.+
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 356789999998 5566655433 5677777664321110 00011 01112346899999997666655
No 313
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=49.68 E-value=29 Score=25.25 Aligned_cols=27 Identities=19% Similarity=0.181 Sum_probs=19.0
Q ss_pred eeEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 77 QYSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.+++..++...+++. +.|+++||||+.
T Consensus 239 ~~~~~~~~~~~lftl--------~~D~~LRiWsl~ 265 (950)
T 4gq2_M 239 ISMIFLSTYNVLVML--------SLDYKLKVLDLS 265 (950)
T ss_dssp EEEEEETTTTEEEEE--------ETTCEEEEEETT
T ss_pred EEEeecCCCcEEEEE--------ECCCEEEEEECC
Confidence 445556666666554 689999999974
No 314
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=44.65 E-value=75 Score=21.95 Aligned_cols=61 Identities=16% Similarity=0.134 Sum_probs=34.7
Q ss_pred EEEEEcCCCcEEEEEeCC----------C--eEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccc
Q psy8803 31 LHVSFSHNGRYFATCSKD----------G--YILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVH 94 (111)
Q Consensus 31 ~~i~~s~~~~~l~s~~~d----------~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 94 (111)
=.|.|+|.|+++++-..+ + .+.+.+...++....... -.-+.++.++|+|++..|++.-.+
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~---P~gaE~TG~~fspDg~tlfvniQH 551 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG---PIGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEEC---CTTCEEEEEEECTTSSEEEEEEES
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeC---CCCccCcCeeECCCCCEEEEEEEC
Confidence 458899999987765432 1 233333333443321110 112456788999999888776433
No 315
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=42.92 E-value=63 Score=20.56 Aligned_cols=31 Identities=16% Similarity=0.163 Sum_probs=23.6
Q ss_pred ccEEEEEEcCCCcEE-EEEeCCCeEEEEecCC
Q psy8803 28 HQVLHVSFSHNGRYF-ATCSKDGYILVWTSSY 58 (111)
Q Consensus 28 ~~v~~i~~s~~~~~l-~s~~~d~~i~iw~~~~ 58 (111)
..-..++|+||++.+ ++-+..++|..|++..
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 456889999998654 4455678999999864
No 316
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=42.89 E-value=28 Score=25.83 Aligned_cols=26 Identities=19% Similarity=0.212 Sum_probs=18.4
Q ss_pred eEEEccCCCEEEEeccccCCccccCceEEEeecC
Q psy8803 78 YSQFNESDTLLLVSGVHFGTPQSTSGEIAVFSLQ 111 (111)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~iw~~~ 111 (111)
.++..++...+++. +.|+++||||++
T Consensus 242 s~~~~~~~~~lftL--------~~D~~LRiWsl~ 267 (1139)
T 4fhn_B 242 SMIFLSTYNVLVML--------SLDYKLKVLDLS 267 (1139)
T ss_dssp CCEEETTTTEEEEE--------BTTCEEEEEETT
T ss_pred EeeccCCccEEEEE--------eCCCEEEEEECC
Confidence 44555566666554 689999999974
No 317
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=42.80 E-value=77 Score=21.53 Aligned_cols=55 Identities=13% Similarity=0.082 Sum_probs=37.9
Q ss_pred CeeeecCCCCceeeeeeec--cc--------ccEEEEEEc-CCC---cEEEEEeCCCeEEEEecCCCcee
Q psy8803 7 EYKRLDYHTPIVETEVLTQ--HT--------HQVLHVSFS-HNG---RYFATCSKDGYILVWTSSYPSKV 62 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~--~~--------~~v~~i~~s-~~~---~~l~s~~~d~~i~iw~~~~~~~~ 62 (111)
+.|.-+|..+++.+-.++. |. ..+. +... .+| ..++.++.++.++++|.++++.+
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 359 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQ 359 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEe
Confidence 6888999999988776642 32 1121 1221 456 37888899999999999887654
No 318
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=42.80 E-value=1.1e+02 Score=24.18 Aligned_cols=100 Identities=12% Similarity=0.087 Sum_probs=54.0
Q ss_pred cCeeeecCCCCceeeeeeecccccEEEEEEcCCC-cEEEEEeCCCeEEEEecCCCcee-eeecceeeeecCceeeEEEcc
Q psy8803 6 EEYKRLDYHTPIVETEVLTQHTHQVLHVSFSHNG-RYFATCSKDGYILVWTSSYPSKV-KYSHDMKTFSWKYTQYSQFNE 83 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~s~~~-~~l~s~~~d~~i~iw~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~ 83 (111)
..+++|+|+.+++.+..+. ....|....|-.+. --|+|. ..+..|++.....+ +-...-..+....+-.-.-++
T Consensus 85 g~~lQiFnl~~k~klks~~-~~e~VvfWkWis~~~l~lVT~---~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~ 160 (1630)
T 1xi4_A 85 GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISLNTVALVTD---NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA 160 (1630)
T ss_pred CCeEEEeehHHhhhhcccc-cCCCceEEEecCCCeeEEEcC---CeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCC
Confidence 3578888888776665555 34567888885533 335444 47999999752211 100000011111111224456
Q ss_pred CCCEEEEeccccCCccccCceEEEeec
Q psy8803 84 SDTLLLVSGVHFGTPQSTSGEIAVFSL 110 (111)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~iw~~ 110 (111)
+...++..|-....+ ...|.+.++.+
T Consensus 161 ~~kW~~l~gi~~~~~-~v~G~mQLyS~ 186 (1630)
T 1xi4_A 161 KQKWLLLTGISAQQN-RVVGAMQLYSV 186 (1630)
T ss_pred CCCeEEEEeeccCCC-cccceeeeeec
Confidence 777877777544332 34566776654
No 319
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=41.51 E-value=48 Score=19.22 Aligned_cols=34 Identities=12% Similarity=0.278 Sum_probs=24.8
Q ss_pred cccEEEEEEcCC-CcEEEEEeCCCeEEEEecCCCc
Q psy8803 27 THQVLHVSFSHN-GRYFATCSKDGYILVWTSSYPS 60 (111)
Q Consensus 27 ~~~v~~i~~s~~-~~~l~s~~~d~~i~iw~~~~~~ 60 (111)
.+.+..+.|... ...|++...++++.+||.+-++
T Consensus 118 ~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 118 RKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp CEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEE
T ss_pred CceEEEEEecCCCceeEEeccCCCeEEEeCCCCce
Confidence 445566667654 3567777889999999998764
No 320
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=37.08 E-value=1e+02 Score=21.39 Aligned_cols=37 Identities=11% Similarity=-0.030 Sum_probs=23.1
Q ss_pred eeecCCCCceeeeeeecc-cccEEEEEEcCCCcEEEEE
Q psy8803 9 KRLDYHTPIVETEVLTQH-THQVLHVSFSHNGRYFATC 45 (111)
Q Consensus 9 i~iw~~~~~~~~~~~~~~-~~~v~~i~~s~~~~~l~s~ 45 (111)
+..++..+++....+.+. ...+..++|+||++.|...
T Consensus 511 v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 511 MLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred EEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 444455556655545433 3578999999998765444
No 321
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=35.65 E-value=1.1e+02 Score=21.14 Aligned_cols=73 Identities=11% Similarity=-0.052 Sum_probs=40.8
Q ss_pred cccEEEEEEcC-CCcEEEEEe-CCC-eEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCc
Q psy8803 27 THQVLHVSFSH-NGRYFATCS-KDG-YILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSG 103 (111)
Q Consensus 27 ~~~v~~i~~s~-~~~~l~s~~-~d~-~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 103 (111)
......+++.| .|.++.+-- ... +|...++.......- +. ......+.+++.+....|..+- +..+
T Consensus 431 l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l---~~-~~l~~P~gla~D~~~~~LYw~D-------~~~~ 499 (628)
T 4a0p_A 431 QDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVL---FF-SGLSKPIALALDSRLGKLFWAD-------SDLR 499 (628)
T ss_dssp TCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEE---EC-SSCSCEEEEEEETTTTEEEEEE-------TTTT
T ss_pred CCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEE---Ee-ccCCCccEEEEeCCCCEEEEEe-------CCCC
Confidence 45678999999 577776643 332 566666654332211 00 0123456788888776766654 3345
Q ss_pred eEEEeec
Q psy8803 104 EIAVFSL 110 (111)
Q Consensus 104 ~i~iw~~ 110 (111)
.|...|+
T Consensus 500 ~I~~~~~ 506 (628)
T 4a0p_A 500 RIESSDL 506 (628)
T ss_dssp EEEEEET
T ss_pred EEEEEeC
Confidence 5665554
No 322
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=34.26 E-value=1.1e+02 Score=20.95 Aligned_cols=55 Identities=9% Similarity=0.004 Sum_probs=36.4
Q ss_pred CeeeecCCCCceeeeeeec--cc--------ccEEEEEEc-CCC---cEEEEEeCCCeEEEEecCCCcee
Q psy8803 7 EYKRLDYHTPIVETEVLTQ--HT--------HQVLHVSFS-HNG---RYFATCSKDGYILVWTSSYPSKV 62 (111)
Q Consensus 7 ~~i~iw~~~~~~~~~~~~~--~~--------~~v~~i~~s-~~~---~~l~s~~~d~~i~iw~~~~~~~~ 62 (111)
+.+.-+|..+++.+-.++. |. ..+. +... .+| ..++.++.++.+.++|.++++..
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALV 346 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEe
Confidence 4677788888887766653 21 1122 2222 456 56777889999999999887654
No 323
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=33.56 E-value=1.2e+02 Score=21.14 Aligned_cols=62 Identities=13% Similarity=0.206 Sum_probs=33.8
Q ss_pred cccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEE
Q psy8803 27 THQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLV 90 (111)
Q Consensus 27 ~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 90 (111)
...|.++...++|++.+....+| +..++........... ...+.-..+.++...+++...+.
T Consensus 494 ~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~~~~~-~~~l~~~~i~~i~~d~~g~lWi~ 555 (781)
T 3v9f_A 494 ENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVRKFNQ-YEGFCSNTINQIYRSSKGQMWLA 555 (781)
T ss_dssp CSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEEEECT-TTTCSCSCEEEEEECTTSCEEEE
T ss_pred cceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEEEccC-CCCCCCCeeEEEEECCCCCEEEE
Confidence 35788999998888776554344 6678876544332211 01111123445555656654444
No 324
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=33.04 E-value=1.6e+02 Score=22.27 Aligned_cols=91 Identities=9% Similarity=-0.008 Sum_probs=41.6
Q ss_pred eeeecCCCCceeeeeeeccc-ccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCC-
Q psy8803 8 YKRLDYHTPIVETEVLTQHT-HQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESD- 85 (111)
Q Consensus 8 ~i~iw~~~~~~~~~~~~~~~-~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~- 85 (111)
.|++.+......+..+.... ..|...+.. +..++.+. ++.+.++.+..+...... . ..+. ..+.++++.|..
T Consensus 493 ~Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~-~-~~l~-~evscl~i~~~~~ 566 (1158)
T 3ei3_A 493 SVRLVSQEPKALVSEWKEPQAKNISVASCN--SSQVVVAV-GRALYYLQIHPQELRQIS-H-TEME-HEVACLDITPLGD 566 (1158)
T ss_dssp CEEEEESSSCCEEEEECCTTCCCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEE-E-EECS-SCEEEEECCCCSS
T ss_pred EEEEEECCCCeEEEEEECCCCCEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeec-c-cCCC-CceEEEEeecCCC
Confidence 34444444333444444322 234444433 23444444 567777777654322110 0 1111 234445544422
Q ss_pred ----CEEEEeccccCCcccc-CceEEEeecC
Q psy8803 86 ----TLLLVSGVHFGTPQST-SGEIAVFSLQ 111 (111)
Q Consensus 86 ----~~~~~~~~~~~~~~~~-~~~i~iw~~~ 111 (111)
..+++.| .+ |++|+|+++.
T Consensus 567 ~~~~s~~~aVg-------~~~d~tv~I~sL~ 590 (1158)
T 3ei3_A 567 SNGLSPLCAIG-------LWTDISARILKLP 590 (1158)
T ss_dssp STTCCSEEEEE-------ETTTTEEEEEETT
T ss_pred CcccccEEEEE-------ECCCCEEEEEECC
Confidence 2334444 54 8899998763
No 325
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=32.84 E-value=1.3e+02 Score=21.07 Aligned_cols=82 Identities=4% Similarity=-0.080 Sum_probs=43.1
Q ss_pred cCeeeecCCCCceeeeeee---cccccEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecce-eeeecCceeeEEE
Q psy8803 6 EEYKRLDYHTPIVETEVLT---QHTHQVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDM-KTFSWKYTQYSQF 81 (111)
Q Consensus 6 d~~i~iw~~~~~~~~~~~~---~~~~~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~-~~~~~~~~~~v~~ 81 (111)
++.+..++..+++.. .+. .....|.++...+++++.+... .-+..++..+.......... .......+..+..
T Consensus 426 ~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 502 (781)
T 3v9f_A 426 LGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKKIWIGTH--AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQ 502 (781)
T ss_dssp TEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSEEEEEET--TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEE
T ss_pred cCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCCEEEEEC--CceEEEeCCCCeEEecccCcccccccceeEEEEE
Confidence 345666666554432 221 1345788998888888766554 45788887764332211000 0011133455666
Q ss_pred ccCCCEEEE
Q psy8803 82 NESDTLLLV 90 (111)
Q Consensus 82 ~~~~~~~~~ 90 (111)
.+++...+.
T Consensus 503 d~~g~lWig 511 (781)
T 3v9f_A 503 DSEGRFWIG 511 (781)
T ss_dssp CTTCCEEEE
T ss_pred cCCCCEEEE
Confidence 666655444
No 326
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=28.92 E-value=1.5e+02 Score=20.59 Aligned_cols=37 Identities=11% Similarity=-0.030 Sum_probs=23.7
Q ss_pred eeecCCCCceeeeeeecc-cccEEEEEEcCCCcEEEEE
Q psy8803 9 KRLDYHTPIVETEVLTQH-THQVLHVSFSHNGRYFATC 45 (111)
Q Consensus 9 i~iw~~~~~~~~~~~~~~-~~~v~~i~~s~~~~~l~s~ 45 (111)
+...+..+++....+.++ ..++..++|+||++.|...
T Consensus 511 ~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 511 MLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred EEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 344455556665555544 4688899999998765443
No 327
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=27.03 E-value=1.6e+02 Score=20.31 Aligned_cols=72 Identities=10% Similarity=0.038 Sum_probs=40.6
Q ss_pred ccEEEEEEcCC-CcEEEEE-eCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccccCCccccCceE
Q psy8803 28 HQVLHVSFSHN-GRYFATC-SKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVHFGTPQSTSGEI 105 (111)
Q Consensus 28 ~~v~~i~~s~~-~~~l~s~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i 105 (111)
.....++++|. |.++.+- +....|...++........ + .......+.+++.+....|..+- ...+.|
T Consensus 435 ~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l---~-~~~l~~P~GlalD~~~~~LY~aD-------~~~~~I 503 (619)
T 3s94_A 435 EEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVL---V-NTSLGWPNGLALDYDEGKIYWGD-------AKTDKI 503 (619)
T ss_dssp CSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE---E-CSSCSCEEEEEEETTTTEEEEEE-------TTTTEE
T ss_pred CCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEE---E-eCCCCCCeeeEEcccCCEEEEEE-------CCCCEE
Confidence 45688999986 6666664 3346677666654322211 0 11123456788888776766654 334455
Q ss_pred EEeec
Q psy8803 106 AVFSL 110 (111)
Q Consensus 106 ~iw~~ 110 (111)
...++
T Consensus 504 ~~~~~ 508 (619)
T 3s94_A 504 EVMNT 508 (619)
T ss_dssp EEEES
T ss_pred EEEec
Confidence 55543
No 328
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=22.11 E-value=21 Score=23.77 Aligned_cols=12 Identities=17% Similarity=0.520 Sum_probs=9.0
Q ss_pred ccCceEEEeecC
Q psy8803 100 STSGEIAVFSLQ 111 (111)
Q Consensus 100 ~~~~~i~iw~~~ 111 (111)
..+|.|+|||++
T Consensus 164 ~~~GVVrvWDVk 175 (577)
T 3mwp_A 164 GRDGVVRVWDVK 175 (577)
T ss_dssp --CCEECSEECS
T ss_pred CCCCeEEEEecC
Confidence 568999999985
No 329
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=22.04 E-value=1.2e+02 Score=20.10 Aligned_cols=29 Identities=28% Similarity=0.473 Sum_probs=21.7
Q ss_pred ccEEEEEEcCCCc--EEEEEeCCCeEEEEecC
Q psy8803 28 HQVLHVSFSHNGR--YFATCSKDGYILVWTSS 57 (111)
Q Consensus 28 ~~v~~i~~s~~~~--~l~s~~~d~~i~iw~~~ 57 (111)
..-..|+|.||+. +|++ ...+.|++++..
T Consensus 14 ~~P~~~a~~pdG~~rl~V~-er~G~i~~~~~~ 44 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFIL-EKEGYVKILTPE 44 (463)
T ss_dssp SSEEEEECCSSSSCCEEEE-ETTTEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEE-eCCceEEEEeCC
Confidence 3557899999985 6665 457899999754
No 330
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=20.49 E-value=1.7e+02 Score=18.51 Aligned_cols=65 Identities=8% Similarity=0.031 Sum_probs=35.4
Q ss_pred cEEEEEEcCCCcEEEEEeCCCeEEEEecCCCceeeeecceeeeecCceeeEEEccCCCEEEEeccc
Q psy8803 29 QVLHVSFSHNGRYFATCSKDGYILVWTSSYPSKVKYSHDMKTFSWKYTQYSQFNESDTLLLVSGVH 94 (111)
Q Consensus 29 ~v~~i~~s~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 94 (111)
....+.|. ++.+++..-....|....+..............-.+..+..|+..|++..++++...
T Consensus 264 ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td~~ 328 (347)
T 3das_A 264 SPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTSNT 328 (347)
T ss_dssp CEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEECTT
T ss_pred CCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEcCC
Confidence 45666775 466776666666665555544321110001111123567788999998777665433
Done!