Your job contains 1 sequence.
>psy8804
MADDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERHQANDVLYYTGELSTSWYILLSG
SVFIDGSMFLPQSRNFVFNVFSPVFGLILNPSVSMAAKVSTLWDPGSMFLPQSR
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8804
(114 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|H0Y905 - symbol:RAPGEF2 "Rap guanine nucleotide... 236 7.2e-20 1
ZFIN|ZDB-GENE-090313-280 - symbol:si:dkey-253i9.4 "si:dke... 233 2.3e-18 2
ZFIN|ZDB-GENE-030131-6959 - symbol:rapgef2 "Rap guanine n... 236 2.8e-18 1
UNIPROTKB|F1RTX9 - symbol:RAPGEF2 "Uncharacterized protei... 236 2.8e-18 1
UNIPROTKB|F1P033 - symbol:Gga.30131 "Uncharacterized prot... 165 2.1e-11 2
UNIPROTKB|F1NVX5 - symbol:Gga.30131 "Uncharacterized prot... 165 2.1e-11 2
UNIPROTKB|B7Z7Y1 - symbol:RAPGEF6 "cDNA FLJ53249, highly ... 164 2.3e-11 2
UNIPROTKB|Q8TEU7 - symbol:RAPGEF6 "Rap guanine nucleotide... 164 4.4e-11 2
UNIPROTKB|E9PCH4 - symbol:FNIP1 "Folliculin-interacting p... 162 7.6e-11 2
WB|WBGene00004254 - symbol:pxf-1 species:6239 "Caenorhabd... 161 2.4e-10 1
UNIPROTKB|G5EDB9 - symbol:pxf-1 "Protein PXF-1, isoform a... 161 2.4e-10 1
RGD|1307645 - symbol:Rapgef6 "Rap guanine nucleotide exch... 159 4.4e-10 1
UNIPROTKB|L7N051 - symbol:RAPGEF6 "Uncharacterized protei... 153 6.2e-10 2
UNIPROTKB|F1MS53 - symbol:RAPGEF6 "Uncharacterized protei... 153 6.2e-10 2
UNIPROTKB|F1Q422 - symbol:RAPGEF6 "Uncharacterized protei... 153 6.3e-10 2
ZFIN|ZDB-GENE-070912-385 - symbol:rapgef4 "Rap guanine nu... 124 1.3e-06 1
UNIPROTKB|F1LNE3 - symbol:Rapgef4 "Rap guanine nucleotide... 123 1.4e-06 1
UNIPROTKB|F1P0M8 - symbol:RAPGEF4 "Uncharacterized protei... 124 1.4e-06 1
UNIPROTKB|B7Z278 - symbol:RAPGEF4 "cDNA FLJ50956, highly ... 120 2.7e-06 1
UNIPROTKB|E1BPX7 - symbol:RAPGEF4 "Uncharacterized protei... 121 2.8e-06 1
UNIPROTKB|F1S067 - symbol:RAPGEF4 "Uncharacterized protei... 120 2.9e-06 1
UNIPROTKB|B7Z3T6 - symbol:RAPGEF4 "Rap guanine nucleotide... 120 2.9e-06 1
UNIPROTKB|J9P4R7 - symbol:RAPGEF4 "Uncharacterized protei... 120 3.0e-06 1
UNIPROTKB|B7Z283 - symbol:RAPGEF4 "cDNA, FLJ78971, highly... 120 3.0e-06 1
ZFIN|ZDB-GENE-080219-4 - symbol:zgc:171558 "zgc:171558" s... 116 3.0e-06 1
UNIPROTKB|E9PB94 - symbol:RAPGEF4 "Rap guanine nucleotide... 120 3.3e-06 1
UNIPROTKB|F1M0P2 - symbol:F1M0P2 "Uncharacterized protein... 107 3.4e-06 1
UNIPROTKB|E7EVE5 - symbol:RAPGEF4 "Rap guanine nucleotide... 120 3.6e-06 1
UNIPROTKB|E2RFC1 - symbol:RAPGEF4 "Uncharacterized protei... 120 3.6e-06 1
UNIPROTKB|Q8WZA2 - symbol:RAPGEF4 "Rap guanine nucleotide... 120 3.6e-06 1
MGI|MGI:1917723 - symbol:Rapgef4 "Rap guanine nucleotide ... 119 4.6e-06 1
UNIPROTKB|H9KZE9 - symbol:H9KZE9 "Uncharacterized protein... 117 5.4e-06 1
UNIPROTKB|F1PW07 - symbol:RAPGEF3 "Uncharacterized protei... 106 1.0e-05 2
ZFIN|ZDB-GENE-090312-38 - symbol:rapgef3 "Rap guanine nuc... 110 3.6e-05 1
UNIPROTKB|F1Q0Q1 - symbol:RAPGEF3 "Uncharacterized protei... 106 4.6e-05 1
UNIPROTKB|F8VRX1 - symbol:RAPGEF3 "Rap guanine nucleotide... 106 8.7e-05 1
UNIPROTKB|H7BYQ1 - symbol:RAPGEF3 "Rap guanine nucleotide... 106 9.4e-05 1
UNIPROTKB|E7EQC8 - symbol:RAPGEF3 "Rap guanine nucleotide... 106 9.5e-05 1
MGI|MGI:2441741 - symbol:Rapgef3 "Rap guanine nucleotide ... 106 0.00010 1
UNIPROTKB|F1ME49 - symbol:RAPGEF3 "Uncharacterized protei... 106 0.00010 1
UNIPROTKB|O95398 - symbol:RAPGEF3 "Rap guanine nucleotide... 106 0.00010 1
RGD|621869 - symbol:Rapgef3 "Rap guanine nucleotide excha... 106 0.00010 1
UNIPROTKB|F1LSI3 - symbol:Rapgef3 "Rap guanine nucleotide... 106 0.00010 1
UNIPROTKB|Q9Z1C8 - symbol:Rapgef3 "Rap guanine nucleotide... 106 0.00010 1
UNIPROTKB|I3LVD8 - symbol:I3LVD8 "Uncharacterized protein... 94 0.00012 1
FB|FBgn0085421 - symbol:Epac "Exchange protein directly a... 103 0.00023 1
>UNIPROTKB|H0Y905 [details] [associations]
symbol:RAPGEF2 "Rap guanine nucleotide exchange factor 2"
species:9606 "Homo sapiens" [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR008937 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0007264 GO:GO:0005622
GO:GO:0005085 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS50042 PANTHER:PTHR23113 HGNC:HGNC:16854 EMBL:AC074344
EMBL:AC095064 EMBL:AC105316 Ensembl:ENST00000505478 Bgee:H0Y905
Uniprot:H0Y905
Length = 279
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 44/70 (62%), Positives = 55/70 (78%)
Query: 4 DLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERHQANDVLYYTGELSTSWYILLSGSVF 63
DL+I+Y LHG+EAL+ R+ LR +C VRYERH+AN+VLYY ++ T WYILLSGSVF
Sbjct: 19 DLEIVYSYLHGMEALSNLREHQLRLMCETVRYERHEANEVLYYPDDIGTCWYILLSGSVF 78
Query: 64 IDGSMFLPQS 73
I SMFLP+S
Sbjct: 79 IKESMFLPRS 88
>ZFIN|ZDB-GENE-090313-280 [details] [associations]
symbol:si:dkey-253i9.4 "si:dkey-253i9.4"
species:7955 "Danio rerio" [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0051056 "regulation of small GTPase mediated
signal transduction" evidence=IEA] Pfam:PF00595 InterPro:IPR000159
InterPro:IPR000651 InterPro:IPR001478 InterPro:IPR001895
InterPro:IPR008937 Pfam:PF00617 Pfam:PF00618 Pfam:PF00788
PROSITE:PS50009 PROSITE:PS50106 PROSITE:PS50200 PROSITE:PS50212
SMART:SM00147 SMART:SM00228 SMART:SM00229 SMART:SM00314
INTERPRO:IPR000595 ZFIN:ZDB-GENE-090313-280 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0007264 GO:GO:0051056 GO:GO:0005622
GO:GO:0005085 SUPFAM:SSF50156 InterPro:IPR018490 SMART:SM00100
SUPFAM:SSF51206 PROSITE:PS50042 Gene3D:1.10.840.10
InterPro:IPR023578 SUPFAM:SSF48366 PANTHER:PTHR23113
GeneTree:ENSGT00560000076949 EMBL:CR762427 IPI:IPI00803014
Ensembl:ENSDART00000087670 Bgee:F1QPF1 Uniprot:F1QPF1
Length = 1525
Score = 233 (87.1 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 44/70 (62%), Positives = 54/70 (77%)
Query: 4 DLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERHQANDVLYYTGELSTSWYILLSGSVF 63
DLQI+Y LHG+EAL+ R+ LR +C VRYE+H AN+VLYY ++ T WYILLSGSVF
Sbjct: 2 DLQIVYSYLHGMEALSNLREHQLRLMCETVRYEQHDANEVLYYPDDIGTCWYILLSGSVF 61
Query: 64 IDGSMFLPQS 73
I SMFLP+S
Sbjct: 62 IKESMFLPRS 71
Score = 32 (16.3 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 6/28 (21%), Positives = 17/28 (60%)
Query: 81 FSPVFGLILNPSVSMAAKVSTLWD--PG 106
F+ +F +I +++ +++ + W+ PG
Sbjct: 934 FNSMFAIISGFNLAPVSRLRSTWERLPG 961
>ZFIN|ZDB-GENE-030131-6959 [details] [associations]
symbol:rapgef2 "Rap guanine nucleotide exchange
factor (GEF) 2" species:7955 "Danio rerio" [GO:0051056 "regulation
of small GTPase mediated signal transduction" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] Pfam:PF00595
InterPro:IPR000159 InterPro:IPR000651 InterPro:IPR001478
InterPro:IPR001895 InterPro:IPR008937 Pfam:PF00617 Pfam:PF00618
Pfam:PF00788 PROSITE:PS50009 PROSITE:PS50106 PROSITE:PS50200
PROSITE:PS50212 SMART:SM00147 SMART:SM00228 SMART:SM00229
SMART:SM00314 Pfam:PF00027 INTERPRO:IPR000595
ZFIN:ZDB-GENE-030131-6959 Gene3D:2.60.120.10 InterPro:IPR014710
GO:GO:0007264 GO:GO:0051056 GO:GO:0005622 GO:GO:0005085
SUPFAM:SSF50156 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS50042 Gene3D:1.10.840.10 InterPro:IPR023578
SUPFAM:SSF48366 PANTHER:PTHR23113 GeneTree:ENSGT00560000076949
EMBL:CABZ01079644 EMBL:CR846102 EMBL:CR847575 EMBL:CU855780
EMBL:FP245469 IPI:IPI00960713 Ensembl:ENSDART00000003826
Bgee:E7F5Z0 Uniprot:E7F5Z0
Length = 1601
Score = 236 (88.1 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 44/70 (62%), Positives = 55/70 (78%)
Query: 4 DLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERHQANDVLYYTGELSTSWYILLSGSVF 63
DL+I+Y LHG+EAL+ R+ LR +C VRYERH+AN+VLYY ++ T WYILLSGSVF
Sbjct: 24 DLEIVYSYLHGMEALSNLREHQLRIMCETVRYERHEANEVLYYPDDIGTCWYILLSGSVF 83
Query: 64 IDGSMFLPQS 73
I SMFLP+S
Sbjct: 84 IKESMFLPRS 93
>UNIPROTKB|F1RTX9 [details] [associations]
symbol:RAPGEF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046582 "Rap GTPase activator activity" evidence=IEA]
[GO:0017034 "Rap guanyl-nucleotide exchange factor activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] Pfam:PF00595
InterPro:IPR000159 InterPro:IPR000651 InterPro:IPR001478
InterPro:IPR001895 InterPro:IPR008937 Pfam:PF00617 Pfam:PF00618
Pfam:PF00788 PROSITE:PS50009 PROSITE:PS50106 PROSITE:PS50200
PROSITE:PS50212 SMART:SM00147 SMART:SM00228 SMART:SM00229
SMART:SM00314 Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0007264 GO:GO:0016020 GO:GO:0005622
SUPFAM:SSF50156 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS50042 Gene3D:1.10.840.10 InterPro:IPR023578
SUPFAM:SSF48366 PANTHER:PTHR23113 GO:GO:0017034 GO:GO:0046582
GeneTree:ENSGT00560000076949 OMA:NQALQVP EMBL:CU915470
EMBL:CU915520 EMBL:CU929809 Ensembl:ENSSSCT00000009724
Uniprot:F1RTX9
Length = 1625
Score = 236 (88.1 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 44/70 (62%), Positives = 55/70 (78%)
Query: 4 DLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERHQANDVLYYTGELSTSWYILLSGSVF 63
DL+I+Y LHG+EAL+ R+ LR +C VRYERH+AN+VLYY ++ T WYILLSGSVF
Sbjct: 11 DLEIVYSYLHGMEALSNLREHQLRLMCETVRYERHEANEVLYYPDDIGTCWYILLSGSVF 70
Query: 64 IDGSMFLPQS 73
I SMFLP+S
Sbjct: 71 IKESMFLPRS 80
>UNIPROTKB|F1P033 [details] [associations]
symbol:Gga.30131 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0051056 "regulation of small GTPase mediated
signal transduction" evidence=IEA] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] Pfam:PF00595
InterPro:IPR000159 InterPro:IPR000651 InterPro:IPR001478
InterPro:IPR001895 InterPro:IPR008937 Pfam:PF00617 Pfam:PF00618
Pfam:PF00788 PROSITE:PS50009 PROSITE:PS50106 PROSITE:PS50200
PROSITE:PS50212 SMART:SM00147 SMART:SM00228 SMART:SM00229
SMART:SM00314 Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0007264 GO:GO:0051056 GO:GO:0005622
GO:GO:0005085 SUPFAM:SSF50156 InterPro:IPR018490 SMART:SM00100
SUPFAM:SSF51206 PROSITE:PS50042 Gene3D:1.10.840.10
InterPro:IPR023578 SUPFAM:SSF48366 PANTHER:PTHR23113
GeneTree:ENSGT00560000076949 EMBL:AADN02028294 EMBL:AADN02028295
EMBL:AADN02028296 EMBL:AADN02028297 EMBL:AADN02028298
EMBL:AADN02028299 EMBL:AADN02028300 EMBL:AADN02028301
EMBL:AADN02028302 EMBL:AADN02028303 EMBL:AADN02028304
EMBL:AADN02028305 EMBL:AADN02028306 EMBL:AADN02028307
IPI:IPI00591353 Ensembl:ENSGALT00000040030 ArrayExpress:F1P033
Uniprot:F1P033
Length = 1583
Score = 165 (63.1 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 4 DLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERHQANDVLYYTGELSTSWYILLSGSVF 63
DL IY LHGL+ L+ +R+ LR + RYER++ N VL+ + ++ WYILLSGSV
Sbjct: 1 DLNTIYSFLHGLDILSHFREHQLRIMSSSARYERYKGNQVLFCSETIARCWYILLSGSVL 60
Query: 64 IDGSMFLP 71
+ SMFLP
Sbjct: 61 MKDSMFLP 68
Score = 96 (38.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYER-HQANDVLYYTGELSTSWYILLSGS 61
DD++ + +H L A A SV R LC V+ +E QA ++ G+ SWY++L+G+
Sbjct: 245 DDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEVVEQAGAIILEDGQELDSWYVILNGT 304
Query: 62 VFI 64
V I
Sbjct: 305 VEI 307
Score = 34 (17.0 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 63 FIDGSMFLPQSRNFVFNVFSPVFGLILNPSVSMAAKVSTLWD--PG 106
FI ++ + +NF ++F+ + GL L P A++ W+ PG
Sbjct: 914 FIKIALHCRECKNFN-SMFAVISGLNLAP----VARLRGTWEKLPG 954
>UNIPROTKB|F1NVX5 [details] [associations]
symbol:Gga.30131 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0051056 "regulation of small GTPase mediated
signal transduction" evidence=IEA] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0017016 "Ras GTPase binding"
evidence=IEA] [GO:0030742 "GTP-dependent protein binding"
evidence=IEA] Pfam:PF00595 InterPro:IPR000159 InterPro:IPR000651
InterPro:IPR001478 InterPro:IPR001895 InterPro:IPR008937
Pfam:PF00617 Pfam:PF00618 Pfam:PF00788 PROSITE:PS50009
PROSITE:PS50106 PROSITE:PS50200 PROSITE:PS50212 SMART:SM00147
SMART:SM00228 SMART:SM00229 SMART:SM00314 Pfam:PF00027
INTERPRO:IPR000595 Gene3D:2.60.120.10 InterPro:IPR014710
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0007264
GO:GO:0051056 GO:GO:0005085 SUPFAM:SSF50156 InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS50042 Gene3D:1.10.840.10
InterPro:IPR023578 SUPFAM:SSF48366 PANTHER:PTHR23113
GeneTree:ENSGT00560000076949 OMA:IMSLQCE EMBL:AADN02028294
EMBL:AADN02028295 EMBL:AADN02028296 EMBL:AADN02028297
EMBL:AADN02028298 EMBL:AADN02028299 EMBL:AADN02028300
EMBL:AADN02028301 EMBL:AADN02028302 EMBL:AADN02028303
EMBL:AADN02028304 EMBL:AADN02028305 EMBL:AADN02028306
EMBL:AADN02028307 IPI:IPI00820480 Ensembl:ENSGALT00000010611
ArrayExpress:F1NVX5 Uniprot:F1NVX5
Length = 1591
Score = 165 (63.1 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 4 DLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERHQANDVLYYTGELSTSWYILLSGSVF 63
DL IY LHGL+ L+ +R+ LR + RYER++ N VL+ + ++ WYILLSGSV
Sbjct: 1 DLNTIYSFLHGLDILSHFREHQLRIMSSSARYERYKGNQVLFCSETIARCWYILLSGSVL 60
Query: 64 IDGSMFLP 71
+ SMFLP
Sbjct: 61 MKDSMFLP 68
Score = 96 (38.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYER-HQANDVLYYTGELSTSWYILLSGS 61
DD++ + +H L A A SV R LC V+ +E QA ++ G+ SWY++L+G+
Sbjct: 245 DDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEVVEQAGAIILEDGQELDSWYVILNGT 304
Query: 62 VFI 64
V I
Sbjct: 305 VEI 307
Score = 34 (17.0 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 63 FIDGSMFLPQSRNFVFNVFSPVFGLILNPSVSMAAKVSTLWD--PG 106
FI ++ + +NF ++F+ + GL L P A++ W+ PG
Sbjct: 914 FIKIALHCRECKNFN-SMFAVISGLNLAP----VARLRGTWEKLPG 954
>UNIPROTKB|B7Z7Y1 [details] [associations]
symbol:RAPGEF6 "cDNA FLJ53249, highly similar to Rap
guanine nucleotide exchange factor 6" species:9606 "Homo sapiens"
[GO:0005622 "intracellular" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0051056 "regulation
of small GTPase mediated signal transduction" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] Pfam:PF00595 InterPro:IPR000159 InterPro:IPR000651
InterPro:IPR001478 InterPro:IPR001895 InterPro:IPR008937
Pfam:PF00617 Pfam:PF00618 Pfam:PF00788 PROSITE:PS50009
PROSITE:PS50106 PROSITE:PS50200 PROSITE:PS50212 SMART:SM00147
SMART:SM00228 SMART:SM00229 SMART:SM00314 Pfam:PF00027
INTERPRO:IPR000595 Gene3D:2.60.120.10 InterPro:IPR014710
GO:GO:0007264 GO:GO:0051056 GO:GO:0005622 GO:GO:0005085
SUPFAM:SSF50156 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS50042 Gene3D:1.10.840.10 InterPro:IPR023578
SUPFAM:SSF48366 PANTHER:PTHR23113 EMBL:AC004227 EMBL:AC004622
EMBL:AC008695 EMBL:AC008497 EMBL:AC026754 HOGENOM:HOG000247009
HOVERGEN:HBG056658 UniGene:Hs.483329 HGNC:HGNC:20655
ChiTaRS:RAPGEF6 EMBL:AK302640 IPI:IPI00968195 SMR:B7Z7Y1
STRING:B7Z7Y1 Ensembl:ENST00000515170 Uniprot:B7Z7Y1
Length = 1204
Score = 164 (62.8 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 33/69 (47%), Positives = 44/69 (63%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERHQANDVLYYTGELSTSWYILLSGSV 62
+DL IY LHG+E L+ R+ LR + RYER+ N VL+ + ++ WYILLSGSV
Sbjct: 23 EDLNTIYSYLHGMEILSNLREHQLRLMSARARYERYSGNQVLFCSETIARCWYILLSGSV 82
Query: 63 FIDGSMFLP 71
+ GSM LP
Sbjct: 83 LVKGSMVLP 91
Score = 96 (38.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYER-HQANDVLYYTGELSTSWYILLSGS 61
DD++ + +H L A A SV R LC V+ +E QA ++ G+ SWY++L+G+
Sbjct: 266 DDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEVVEQAGAIILEDGQELDSWYVILNGT 325
Query: 62 VFI 64
V I
Sbjct: 326 VEI 328
Score = 32 (16.3 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 5/24 (20%), Positives = 14/24 (58%)
Query: 81 FSPVFGLILNPSVSMAAKVSTLWD 104
F+ +F +I +++ A++ W+
Sbjct: 947 FNSMFAIISGLNLASVARLRGTWE 970
>UNIPROTKB|Q8TEU7 [details] [associations]
symbol:RAPGEF6 "Rap guanine nucleotide exchange factor 6"
species:9606 "Homo sapiens" [GO:0051056 "regulation of small GTPase
mediated signal transduction" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0017016 "Ras GTPase binding" evidence=IDA]
[GO:0043087 "regulation of GTPase activity" evidence=NAS]
[GO:0007265 "Ras protein signal transduction" evidence=NAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0030742
"GTP-dependent protein binding" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
Pfam:PF00595 InterPro:IPR000159 InterPro:IPR000651
InterPro:IPR001478 InterPro:IPR001895 InterPro:IPR008937
Pfam:PF00617 Pfam:PF00618 Pfam:PF00788 PROSITE:PS50009
PROSITE:PS50106 PROSITE:PS50200 PROSITE:PS50212 SMART:SM00147
SMART:SM00228 SMART:SM00229 SMART:SM00314 Pfam:PF00027
INTERPRO:IPR000595 Gene3D:2.60.120.10 InterPro:IPR014710
GO:GO:0005886 GO:GO:0005737 GO:GO:0007265 GO:GO:0007264
GO:GO:0051056 GO:GO:0005622 GO:GO:0005085 SUPFAM:SSF50156
GO:GO:0043087 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS50042 GO:GO:0030742 Gene3D:1.10.840.10 InterPro:IPR023578
SUPFAM:SSF48366 PANTHER:PTHR23113 EMBL:AC004227 EMBL:AC004622
EMBL:AC008695 EMBL:AC008497 EMBL:AC026754 GO:GO:0017016 PDB:3LNY
PDBsum:3LNY eggNOG:NOG307777 HOVERGEN:HBG056658 EMBL:AF478468
EMBL:AF478469 EMBL:AF478567 EMBL:AF394782 EMBL:BC133703
EMBL:BC142964 EMBL:BC144627 IPI:IPI00291839 IPI:IPI00337694
IPI:IPI00872771 IPI:IPI00943807 IPI:IPI00943887
RefSeq:NP_001157858.1 RefSeq:NP_001157859.1 RefSeq:NP_001157860.1
RefSeq:NP_001157861.1 RefSeq:NP_001157862.1 RefSeq:NP_057424.3
UniGene:Hs.483329 PDB:2D93 PDBsum:2D93 ProteinModelPortal:Q8TEU7
SMR:Q8TEU7 IntAct:Q8TEU7 STRING:Q8TEU7 PhosphoSite:Q8TEU7
DMDM:34395686 PaxDb:Q8TEU7 PRIDE:Q8TEU7 Ensembl:ENST00000296859
Ensembl:ENST00000307984 Ensembl:ENST00000308008
Ensembl:ENST00000507093 Ensembl:ENST00000509018
Ensembl:ENST00000510071 GeneID:51735 KEGG:hsa:51735 UCSC:uc003kvn.2
UCSC:uc003kvo.2 UCSC:uc003kvr.3 CTD:51735 GeneCards:GC05M130759
H-InvDB:HIX0005150 H-InvDB:HIX0078163 HGNC:HGNC:20655 HPA:HPA037982
MIM:610499 neXtProt:NX_Q8TEU7 PharmGKB:PA134885793 KO:K08020
OMA:IMSLQCE PhylomeDB:Q8TEU7 ChiTaRS:RAPGEF6
EvolutionaryTrace:Q8TEU7 GenomeRNAi:51735 NextBio:55804
ArrayExpress:Q8TEU7 Bgee:Q8TEU7 CleanEx:HS_RAPGEF6
Genevestigator:Q8TEU7 GermOnline:ENSG00000158987 Uniprot:Q8TEU7
Length = 1601
Score = 164 (62.8 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 33/69 (47%), Positives = 44/69 (63%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERHQANDVLYYTGELSTSWYILLSGSV 62
+DL IY LHG+E L+ R+ LR + RYER+ N VL+ + ++ WYILLSGSV
Sbjct: 23 EDLNTIYSYLHGMEILSNLREHQLRLMSARARYERYSGNQVLFCSETIARCWYILLSGSV 82
Query: 63 FIDGSMFLP 71
+ GSM LP
Sbjct: 83 LVKGSMVLP 91
Score = 96 (38.9 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYER-HQANDVLYYTGELSTSWYILLSGS 61
DD++ + +H L A A SV R LC V+ +E QA ++ G+ SWY++L+G+
Sbjct: 266 DDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEVVEQAGAIILEDGQELDSWYVILNGT 325
Query: 62 VFI 64
V I
Sbjct: 326 VEI 328
Score = 32 (16.3 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 5/24 (20%), Positives = 14/24 (58%)
Query: 81 FSPVFGLILNPSVSMAAKVSTLWD 104
F+ +F +I +++ A++ W+
Sbjct: 947 FNSMFAIISGLNLASVARLRGTWE 970
>UNIPROTKB|E9PCH4 [details] [associations]
symbol:FNIP1 "Folliculin-interacting protein 1"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0051056 "regulation of small GTPase
mediated signal transduction" evidence=IEA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
Pfam:PF00595 InterPro:IPR000159 InterPro:IPR000651
InterPro:IPR001478 InterPro:IPR001895 InterPro:IPR008937
Pfam:PF00617 Pfam:PF00618 Pfam:PF00788 PROSITE:PS50009
PROSITE:PS50106 PROSITE:PS50200 PROSITE:PS50212 SMART:SM00147
SMART:SM00228 SMART:SM00229 SMART:SM00314 Pfam:PF00027
INTERPRO:IPR000595 Gene3D:2.60.120.10 InterPro:IPR014710
GO:GO:0007264 GO:GO:0051056 GO:GO:0005622 GO:GO:0005085
SUPFAM:SSF50156 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS50042 Gene3D:1.10.840.10 InterPro:IPR023578
SUPFAM:SSF48366 PANTHER:PTHR23113 EMBL:AC004227 EMBL:AC004622
EMBL:AC005593 EMBL:AC008695 EMBL:AC008497 EMBL:AC026754
HGNC:HGNC:29418 IPI:IPI00965119 ProteinModelPortal:E9PCH4
SMR:E9PCH4 Ensembl:ENST00000514667 UCSC:uc003kvp.2 OMA:FLHEXSL
ArrayExpress:E9PCH4 Bgee:E9PCH4 Uniprot:E9PCH4
Length = 1651
Score = 162 (62.1 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 33/68 (48%), Positives = 43/68 (63%)
Query: 4 DLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERHQANDVLYYTGELSTSWYILLSGSVF 63
DL IY LHG+E L+ R+ LR + RYER+ N VL+ + ++ WYILLSGSV
Sbjct: 74 DLNTIYSYLHGMEILSNLREHQLRLMSARARYERYSGNQVLFCSETIARCWYILLSGSVL 133
Query: 64 IDGSMFLP 71
+ GSM LP
Sbjct: 134 VKGSMVLP 141
Score = 96 (38.9 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYER-HQANDVLYYTGELSTSWYILLSGS 61
DD++ + +H L A A SV R LC V+ +E QA ++ G+ SWY++L+G+
Sbjct: 316 DDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEVVEQAGAIILEDGQELDSWYVILNGT 375
Query: 62 VFI 64
V I
Sbjct: 376 VEI 378
Score = 32 (16.3 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 5/24 (20%), Positives = 14/24 (58%)
Query: 81 FSPVFGLILNPSVSMAAKVSTLWD 104
F+ +F +I +++ A++ W+
Sbjct: 997 FNSMFAIISGLNLASVARLRGTWE 1020
>WB|WBGene00004254 [details] [associations]
symbol:pxf-1 species:6239 "Caenorhabditis elegans"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0051056 "regulation
of small GTPase mediated signal transduction" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0017034 "Rap guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0040002 "collagen and cuticulin-based
cuticle development" evidence=IMP] [GO:0008544 "epidermis
development" evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0060102 "collagen and
cuticulin-based cuticle extracellular matrix" evidence=IDA]
Pfam:PF00595 InterPro:IPR000159 InterPro:IPR000651
InterPro:IPR001478 InterPro:IPR001895 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618 Pfam:PF00788
PROSITE:PS00720 PROSITE:PS50009 PROSITE:PS50106 PROSITE:PS50200
PROSITE:PS50212 SMART:SM00147 SMART:SM00228 SMART:SM00229
SMART:SM00314 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0007264 GO:GO:0018996 GO:GO:0051056
GO:GO:0005622 SUPFAM:SSF50156 InterPro:IPR018490 SMART:SM00100
SUPFAM:SSF51206 PROSITE:PS50042 GO:GO:0008544 GO:GO:0040002
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 GO:GO:0060102 EMBL:Z68880 EMBL:Z69664
GO:GO:0017034 GeneTree:ENSGT00560000076949 KO:K08018
UniGene:Cel.18293 GeneID:177894 KEGG:cel:CELE_T14G10.2 CTD:177894
PIR:T23314 EMBL:AF170796 EMBL:AF308447 RefSeq:NP_001023389.1
SMR:G5EDB9 IntAct:G5EDB9 EnsemblMetazoa:T14G10.2a.1
EnsemblMetazoa:T14G10.2a.2 WormBase:T14G10.2a OMA:KEPSERN
NextBio:898830 Uniprot:G5EDB9
Length = 1470
Score = 161 (61.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERHQANDVLYYTGELSTSWYILLSGSV 62
DD++ +Y L L+ + L++LC+ RYERH A +L+ G+++ SWYILLSGSV
Sbjct: 30 DDIRNVYEQLRQLDTFSNLFIGPLKALCKTARYERHPAQYILFRDGDVARSWYILLSGSV 89
Query: 63 FIDGSMFLP 71
FI+ +++P
Sbjct: 90 FIENQIYMP 98
>UNIPROTKB|G5EDB9 [details] [associations]
symbol:pxf-1 "Protein PXF-1, isoform a" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00595 InterPro:IPR000159 InterPro:IPR000651
InterPro:IPR001478 InterPro:IPR001895 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618 Pfam:PF00788
PROSITE:PS00720 PROSITE:PS50009 PROSITE:PS50106 PROSITE:PS50200
PROSITE:PS50212 SMART:SM00147 SMART:SM00228 SMART:SM00229
SMART:SM00314 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0007264 GO:GO:0018996 GO:GO:0051056
GO:GO:0005622 SUPFAM:SSF50156 InterPro:IPR018490 SMART:SM00100
SUPFAM:SSF51206 PROSITE:PS50042 GO:GO:0008544 GO:GO:0040002
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 GO:GO:0060102 EMBL:Z68880 EMBL:Z69664
GO:GO:0017034 GeneTree:ENSGT00560000076949 KO:K08018
UniGene:Cel.18293 GeneID:177894 KEGG:cel:CELE_T14G10.2 CTD:177894
PIR:T23314 EMBL:AF170796 EMBL:AF308447 RefSeq:NP_001023389.1
SMR:G5EDB9 IntAct:G5EDB9 EnsemblMetazoa:T14G10.2a.1
EnsemblMetazoa:T14G10.2a.2 WormBase:T14G10.2a OMA:KEPSERN
NextBio:898830 Uniprot:G5EDB9
Length = 1470
Score = 161 (61.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERHQANDVLYYTGELSTSWYILLSGSV 62
DD++ +Y L L+ + L++LC+ RYERH A +L+ G+++ SWYILLSGSV
Sbjct: 30 DDIRNVYEQLRQLDTFSNLFIGPLKALCKTARYERHPAQYILFRDGDVARSWYILLSGSV 89
Query: 63 FIDGSMFLP 71
FI+ +++P
Sbjct: 90 FIENQIYMP 98
>RGD|1307645 [details] [associations]
symbol:Rapgef6 "Rap guanine nucleotide exchange factor (GEF) 6"
species:10116 "Rattus norvegicus" [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA;ISO] [GO:0005622
"intracellular" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0017016 "Ras GTPase binding"
evidence=IEA;ISO] [GO:0030742 "GTP-dependent protein binding"
evidence=IEA;ISO] [GO:0051056 "regulation of small GTPase mediated
signal transduction" evidence=IEA] Pfam:PF00595 InterPro:IPR000159
InterPro:IPR000651 InterPro:IPR001478 InterPro:IPR001895
InterPro:IPR008937 Pfam:PF00617 Pfam:PF00618 Pfam:PF00788
PROSITE:PS50009 PROSITE:PS50106 PROSITE:PS50200 PROSITE:PS50212
SMART:SM00147 SMART:SM00228 SMART:SM00229 SMART:SM00314
Pfam:PF00027 RGD:1307645 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0007264 GO:GO:0051056 GO:GO:0005622
GO:GO:0005085 SUPFAM:SSF50156 InterPro:IPR018490 SMART:SM00100
SUPFAM:SSF51206 PROSITE:PS50042 EMBL:CH473948 Gene3D:1.10.840.10
InterPro:IPR023578 SUPFAM:SSF48366 PANTHER:PTHR23113
GeneTree:ENSGT00560000076949 CTD:51735 KO:K08020 IPI:IPI00869572
RefSeq:NP_001100473.1 UniGene:Rn.218243 Ensembl:ENSRNOT00000013481
GeneID:303141 KEGG:rno:303141 UCSC:RGD:1307645 NextBio:650735
Uniprot:D3ZTL8
Length = 1606
Score = 159 (61.0 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 32/69 (46%), Positives = 44/69 (63%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERHQANDVLYYTGELSTSWYILLSGSV 62
+DL IIY LHG+E L+ R+ LR + RYER+ N +L+ + ++ WYILLSGSV
Sbjct: 23 EDLNIIYSYLHGMEILSNLREHQLRLMSTRARYERYNGNQMLFCSETIARCWYILLSGSV 82
Query: 63 FIDGSMFLP 71
+ SM LP
Sbjct: 83 LVKDSMVLP 91
>UNIPROTKB|L7N051 [details] [associations]
symbol:RAPGEF6 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051056 "regulation of small GTPase
mediated signal transduction" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA]
GeneTree:ENSGT00560000076949 EMBL:AAEX03007772
Ensembl:ENSCAFT00000001169 Uniprot:L7N051
Length = 1606
Score = 153 (58.9 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 31/69 (44%), Positives = 43/69 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERHQANDVLYYTGELSTSWYILLSGSV 62
+DL IY LHG+E L+ R+ LR + RYER+ N +L+ + ++ WYILLSGSV
Sbjct: 23 EDLNTIYSYLHGMEILSNLREHQLRLMSARARYERYSGNQILFCSETVARCWYILLSGSV 82
Query: 63 FIDGSMFLP 71
+ SM LP
Sbjct: 83 LMKDSMVLP 91
Score = 96 (38.9 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYER-HQANDVLYYTGELSTSWYILLSGS 61
DD++ + +H L A A SV R LC V+ +E QA ++ G+ SWY++L+G+
Sbjct: 266 DDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEVVEQAGAIILEDGQELDSWYVILNGT 325
Query: 62 VFI 64
V I
Sbjct: 326 VEI 328
Score = 32 (16.3 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 5/24 (20%), Positives = 14/24 (58%)
Query: 81 FSPVFGLILNPSVSMAAKVSTLWD 104
F+ +F +I +++ A++ W+
Sbjct: 947 FNSMFAIISGLNLASVARLRGTWE 970
>UNIPROTKB|F1MS53 [details] [associations]
symbol:RAPGEF6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030742 "GTP-dependent protein binding" evidence=IEA]
[GO:0017016 "Ras GTPase binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0051056 "regulation of small
GTPase mediated signal transduction" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] Pfam:PF00595
InterPro:IPR000159 InterPro:IPR000651 InterPro:IPR001478
InterPro:IPR001895 InterPro:IPR008937 Pfam:PF00617 Pfam:PF00618
Pfam:PF00788 PROSITE:PS50009 PROSITE:PS50106 PROSITE:PS50200
PROSITE:PS50212 SMART:SM00147 SMART:SM00228 SMART:SM00229
SMART:SM00314 Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0007264 GO:GO:0051056 GO:GO:0005085 SUPFAM:SSF50156
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS50042
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 GeneTree:ENSGT00560000076949 OMA:IMSLQCE
EMBL:DAAA02019718 IPI:IPI01000007 Ensembl:ENSBTAT00000000910
Uniprot:F1MS53
Length = 1612
Score = 153 (58.9 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 32/68 (47%), Positives = 42/68 (61%)
Query: 4 DLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERHQANDVLYYTGELSTSWYILLSGSVF 63
DL IY LHG+E L+ R+ LR + RYER+ N VL+ + ++ WYILLSGSV
Sbjct: 28 DLNTIYSYLHGMEILSNLREHQLRLMSARARYERYSGNQVLFCSETIARCWYILLSGSVL 87
Query: 64 IDGSMFLP 71
+ SM LP
Sbjct: 88 MKDSMVLP 95
Score = 97 (39.2 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYER-HQANDVLYYTGELSTSWYILLSGS 61
DD++ + +H L A A SV R LC V+ +E QA V+ G+ SWY++L+G+
Sbjct: 270 DDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEVVEQAGAVILEDGQELDSWYVILNGT 329
Query: 62 VFI 64
V I
Sbjct: 330 VEI 332
Score = 32 (16.3 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 5/24 (20%), Positives = 14/24 (58%)
Query: 81 FSPVFGLILNPSVSMAAKVSTLWD 104
F+ +F +I +++ A++ W+
Sbjct: 951 FNSMFAIISGLNLASVARLRGTWE 974
>UNIPROTKB|F1Q422 [details] [associations]
symbol:RAPGEF6 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0051056 "regulation of small
GTPase mediated signal transduction" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] Pfam:PF00595
InterPro:IPR000159 InterPro:IPR000651 InterPro:IPR001478
InterPro:IPR001895 InterPro:IPR008937 Pfam:PF00617 Pfam:PF00618
Pfam:PF00788 PROSITE:PS50009 PROSITE:PS50106 PROSITE:PS50200
PROSITE:PS50212 SMART:SM00147 SMART:SM00228 SMART:SM00229
SMART:SM00314 Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0007264 GO:GO:0051056 GO:GO:0005622
GO:GO:0005085 SUPFAM:SSF50156 InterPro:IPR018490 SMART:SM00100
SUPFAM:SSF51206 PROSITE:PS50042 Gene3D:1.10.840.10
InterPro:IPR023578 SUPFAM:SSF48366 PANTHER:PTHR23113
GeneTree:ENSGT00560000076949 CTD:51735 KO:K08020 OMA:IMSLQCE
EMBL:AAEX03007772 RefSeq:XP_003431670.1 Ensembl:ENSCAFT00000001172
GeneID:609521 KEGG:cfa:609521 Uniprot:F1Q422
Length = 1614
Score = 153 (58.9 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 31/69 (44%), Positives = 43/69 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERHQANDVLYYTGELSTSWYILLSGSV 62
+DL IY LHG+E L+ R+ LR + RYER+ N +L+ + ++ WYILLSGSV
Sbjct: 23 EDLNTIYSYLHGMEILSNLREHQLRLMSARARYERYSGNQILFCSETVARCWYILLSGSV 82
Query: 63 FIDGSMFLP 71
+ SM LP
Sbjct: 83 LMKDSMVLP 91
Score = 96 (38.9 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYER-HQANDVLYYTGELSTSWYILLSGS 61
DD++ + +H L A A SV R LC V+ +E QA ++ G+ SWY++L+G+
Sbjct: 266 DDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEVVEQAGAIILEDGQELDSWYVILNGT 325
Query: 62 VFI 64
V I
Sbjct: 326 VEI 328
Score = 32 (16.3 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 5/24 (20%), Positives = 14/24 (58%)
Query: 81 FSPVFGLILNPSVSMAAKVSTLWD 104
F+ +F +I +++ A++ W+
Sbjct: 947 FNSMFAIISGLNLASVARLRGTWE 970
>ZFIN|ZDB-GENE-070912-385 [details] [associations]
symbol:rapgef4 "Rap guanine nucleotide exchange
factor (GEF) 4" species:7955 "Danio rerio" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA] [GO:0001932
"regulation of protein phosphorylation" evidence=IEA] [GO:0005952
"cAMP-dependent protein kinase complex" evidence=IEA] [GO:0051056
"regulation of small GTPase mediated signal transduction"
evidence=IEA] [GO:0008603 "cAMP-dependent protein kinase regulator
activity" evidence=IEA] InterPro:IPR000591 InterPro:IPR000651
InterPro:IPR001895 InterPro:IPR002373 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617 Pfam:PF00618
PRINTS:PR00103 PROSITE:PS00720 PROSITE:PS50009 PROSITE:PS50186
PROSITE:PS50212 SMART:SM00049 SMART:SM00147 SMART:SM00229
Pfam:PF00027 INTERPRO:IPR000595 ZFIN:ZDB-GENE-070912-385
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0007264 GO:GO:0051056
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005952 GO:GO:0008603
GO:GO:0005085 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS50042 Gene3D:1.10.840.10 InterPro:IPR023578
SUPFAM:SSF48366 PANTHER:PTHR23113 eggNOG:NOG236726
GeneTree:ENSGT00560000077091 HOVERGEN:HBG056985 OrthoDB:EOG4W0XC9
EMBL:BX004769 EMBL:BX957292 IPI:IPI00489225 UniGene:Dr.135336
SMR:B0S4Y8 Ensembl:ENSDART00000144046 HOGENOM:HOG000169469
Uniprot:B0S4Y8
Length = 972
Score = 124 (48.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
DDL+IIY L ++AL+ +V R L V+ +E H +A VL+ GE TSWYI+L GS
Sbjct: 345 DDLEIIYEELLHIKALSHLSTTVKRELAGVLIFESHAKAGTVLFNQGEEGTSWYIILKGS 404
Query: 62 V 62
V
Sbjct: 405 V 405
>UNIPROTKB|F1LNE3 [details] [associations]
symbol:Rapgef4 "Rap guanine nucleotide exchange factor 4"
species:10116 "Rattus norvegicus" [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005952 "cAMP-dependent
protein kinase complex" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0008603
"cAMP-dependent protein kinase regulator activity" evidence=IEA]
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR000159 InterPro:IPR000591
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR002373
InterPro:IPR008937 InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617
Pfam:PF00618 Pfam:PF00788 PRINTS:PR00103 PROSITE:PS00720
PROSITE:PS50009 PROSITE:PS50186 PROSITE:PS50212 SMART:SM00049
SMART:SM00147 SMART:SM00229 Pfam:PF00027 RGD:621886
INTERPRO:IPR000595 Gene3D:2.60.120.10 InterPro:IPR014710
GO:GO:0005829 GO:GO:0007264 GO:GO:0019933 GO:GO:0051056
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005952 GO:GO:0008603
GO:GO:0017156 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS50042 GO:GO:0030073 Gene3D:1.10.840.10 InterPro:IPR023578
SUPFAM:SSF48366 GO:GO:0005088 PANTHER:PTHR23113 GO:GO:0017157
IPI:IPI00208697 PRIDE:F1LNE3 Ensembl:ENSRNOT00000048797
ArrayExpress:F1LNE3 Uniprot:F1LNE3
Length = 836
Score = 123 (48.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 2 ADDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSG 60
ADDL+IIY L ++AL+ +V R L V+ +E H + VL+ GE TSWYI+L G
Sbjct: 167 ADDLEIIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKG 226
Query: 61 SV 62
SV
Sbjct: 227 SV 228
>UNIPROTKB|F1P0M8 [details] [associations]
symbol:RAPGEF4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005952 "cAMP-dependent protein kinase complex"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008603 "cAMP-dependent protein
kinase regulator activity" evidence=IEA] [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0005088 "Ras guanyl-nucleotide exchange factor activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0017016 "Ras
GTPase binding" evidence=IEA] [GO:0017156 "calcium ion-dependent
exocytosis" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA] [GO:0019933 "cAMP-mediated signaling" evidence=IEA]
[GO:0030073 "insulin secretion" evidence=IEA] [GO:0030552 "cAMP
binding" evidence=IEA] InterPro:IPR000159 InterPro:IPR000591
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR002373
InterPro:IPR008937 InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617
Pfam:PF00618 Pfam:PF00788 PRINTS:PR00103 PROSITE:PS00720
PROSITE:PS50009 PROSITE:PS50186 PROSITE:PS50212 SMART:SM00049
SMART:SM00147 SMART:SM00229 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0005829 GO:GO:0007264
GO:GO:0019933 GO:GO:0051056 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0005952 GO:GO:0008603 GO:GO:0017156 InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS50042 GO:GO:0030073
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366 GO:GO:0005088
PANTHER:PTHR23113 GO:GO:0017157 GeneTree:ENSGT00560000077091
OMA:TIYDWEL EMBL:AADN02020166 EMBL:AADN02020167 EMBL:AADN02020168
EMBL:AADN02020169 EMBL:AADN02020170 EMBL:AADN02020171
EMBL:AADN02020172 EMBL:AADN02020173 EMBL:AADN02020174
EMBL:AADN02020175 EMBL:AADN02020176 EMBL:AADN02020177
EMBL:AADN02020178 EMBL:AADN02020179 EMBL:AADN02020180
EMBL:AADN02020181 EMBL:AADN02020182 EMBL:AADN02020183
EMBL:AADN02020184 EMBL:AADN02020185 EMBL:AADN02020186
EMBL:AADN02020187 EMBL:AADN02020188 EMBL:AADN02020189
EMBL:AADN02020190 EMBL:AADN02020191 EMBL:AADN02020192
IPI:IPI00596973 Ensembl:ENSGALT00000015238 Uniprot:F1P0M8
Length = 1034
Score = 124 (48.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
DDL+IIY L ++AL+ +V R L V+ +E H +A VL+ GE TSWYI+L GS
Sbjct: 362 DDLEIIYEELLHIKALSHLSTTVKRELAGVLIFESHPKAGTVLFNQGEEGTSWYIILKGS 421
Query: 62 V 62
V
Sbjct: 422 V 422
>UNIPROTKB|B7Z278 [details] [associations]
symbol:RAPGEF4 "cDNA FLJ50956, highly similar to Rap
guanine nucleotide exchange factor 4" species:9606 "Homo sapiens"
[GO:0005952 "cAMP-dependent protein kinase complex" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0008603 "cAMP-dependent protein kinase regulator
activity" evidence=IEA] [GO:0051056 "regulation of small GTPase
mediated signal transduction" evidence=IEA] [GO:0005088 "Ras
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0017016 "Ras GTPase
binding" evidence=IEA] [GO:0017156 "calcium ion-dependent
exocytosis" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA] [GO:0019933 "cAMP-mediated signaling" evidence=IEA]
[GO:0030073 "insulin secretion" evidence=IEA] [GO:0030552 "cAMP
binding" evidence=IEA] InterPro:IPR000159 InterPro:IPR000591
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR002373
InterPro:IPR008937 InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617
Pfam:PF00618 Pfam:PF00788 PRINTS:PR00103 PROSITE:PS00720
PROSITE:PS50009 PROSITE:PS50186 PROSITE:PS50212 SMART:SM00049
SMART:SM00147 SMART:SM00229 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0005829 GO:GO:0007264
GO:GO:0007507 GO:GO:0019933 GO:GO:0016324 GO:GO:0030424
GO:GO:0051056 GO:GO:0043197 GO:GO:0016323 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005952 GO:GO:0008603 GO:GO:0050805
GO:GO:0017156 GO:GO:0001917 InterPro:IPR018490 SMART:SM00100
SUPFAM:SSF51206 PROSITE:PS50042 GO:GO:0050773 GO:GO:0030073
GO:GO:0060076 GO:GO:0001750 Gene3D:1.10.840.10 InterPro:IPR023578
SUPFAM:SSF48366 GO:GO:0014911 GO:GO:0005088 PANTHER:PTHR23113
GO:GO:0030552 GO:GO:0017157 EMBL:AC019046 HOGENOM:HOG000230545
HOVERGEN:HBG056985 IPI:IPI00329561 UniGene:Hs.470646
HGNC:HGNC:16626 ChiTaRS:RAPGEF4 EMBL:AC018712 EMBL:AC009484
EMBL:AC104086 EMBL:AK294433 EMBL:AK294914 SMR:B7Z278 STRING:B7Z278
Ensembl:ENST00000535187 Uniprot:B7Z278
Length = 791
Score = 120 (47.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
DDL+IIY L ++AL+ +V R L V+ +E H + VL+ GE TSWYI+L GS
Sbjct: 122 DDLEIIYEELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGS 181
Query: 62 V 62
V
Sbjct: 182 V 182
>UNIPROTKB|E1BPX7 [details] [associations]
symbol:RAPGEF4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030552 "cAMP binding" evidence=IEA] [GO:0030073
"insulin secretion" evidence=IEA] [GO:0019933 "cAMP-mediated
signaling" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA] [GO:0017156 "calcium ion-dependent exocytosis"
evidence=IEA] [GO:0017016 "Ras GTPase binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005088 "Ras
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0008603 "cAMP-dependent protein
kinase regulator activity" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0005952
"cAMP-dependent protein kinase complex" evidence=IEA]
InterPro:IPR000159 InterPro:IPR000591 InterPro:IPR000651
InterPro:IPR001895 InterPro:IPR002373 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617 Pfam:PF00618
Pfam:PF00788 PRINTS:PR00103 PROSITE:PS00720 PROSITE:PS50009
PROSITE:PS50186 PROSITE:PS50212 SMART:SM00049 SMART:SM00147
SMART:SM00229 Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0005829 GO:GO:0007264 GO:GO:0019933
GO:GO:0051056 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005952
GO:GO:0008603 GO:GO:0017156 InterPro:IPR018490 SMART:SM00100
SUPFAM:SSF51206 PROSITE:PS50042 GO:GO:0030073 Gene3D:1.10.840.10
InterPro:IPR023578 SUPFAM:SSF48366 GO:GO:0005088 PANTHER:PTHR23113
GO:GO:0017157 GeneTree:ENSGT00560000077091 OMA:TIYDWEL
EMBL:DAAA02004216 EMBL:DAAA02004217 EMBL:DAAA02004218
IPI:IPI00923892 Ensembl:ENSBTAT00000061074 Uniprot:E1BPX7
Length = 1012
Score = 121 (47.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
DDL+IIY L ++AL+ +V R L V+ +E H + VL+ GE TSWYI+L GS
Sbjct: 343 DDLEIIYEELLHIKALSHLSTTVKRELAAVLIFESHAKGGTVLFNQGEEGTSWYIILKGS 402
Query: 62 V 62
V
Sbjct: 403 V 403
>UNIPROTKB|F1S067 [details] [associations]
symbol:RAPGEF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030552 "cAMP binding" evidence=IEA] [GO:0030073
"insulin secretion" evidence=IEA] [GO:0019933 "cAMP-mediated
signaling" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA] [GO:0017156 "calcium ion-dependent exocytosis"
evidence=IEA] [GO:0017016 "Ras GTPase binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005088 "Ras
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0008603 "cAMP-dependent protein
kinase regulator activity" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0005952
"cAMP-dependent protein kinase complex" evidence=IEA]
InterPro:IPR000159 InterPro:IPR000591 InterPro:IPR000651
InterPro:IPR001895 InterPro:IPR002373 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617 Pfam:PF00618
Pfam:PF00788 PRINTS:PR00103 PROSITE:PS00720 PROSITE:PS50009
PROSITE:PS50186 PROSITE:PS50212 SMART:SM00049 SMART:SM00147
SMART:SM00229 Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0005829 GO:GO:0007264 GO:GO:0019933
GO:GO:0051056 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005952
GO:GO:0008603 GO:GO:0017156 InterPro:IPR018490 SMART:SM00100
SUPFAM:SSF51206 PROSITE:PS50042 GO:GO:0030073 Gene3D:1.10.840.10
InterPro:IPR023578 SUPFAM:SSF48366 GO:GO:0005088 PANTHER:PTHR23113
GO:GO:0017157 GeneTree:ENSGT00560000077091 OMA:TIYDWEL
EMBL:CU914746 Ensembl:ENSSSCT00000017377 Uniprot:F1S067
Length = 836
Score = 120 (47.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
DDL+IIY L ++AL+ +V R L V+ +E H + VL+ GE TSWYI+L GS
Sbjct: 163 DDLEIIYEELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGS 222
Query: 62 V 62
V
Sbjct: 223 V 223
>UNIPROTKB|B7Z3T6 [details] [associations]
symbol:RAPGEF4 "Rap guanine nucleotide exchange factor 4"
species:9606 "Homo sapiens" [GO:0005952 "cAMP-dependent protein
kinase complex" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0008603 "cAMP-dependent
protein kinase regulator activity" evidence=IEA] [GO:0051056
"regulation of small GTPase mediated signal transduction"
evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange factor
activity" evidence=IEA] InterPro:IPR000159 InterPro:IPR000591
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR002373
InterPro:IPR008937 InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617
Pfam:PF00618 Pfam:PF00788 PRINTS:PR00103 PROSITE:PS00720
PROSITE:PS50009 PROSITE:PS50186 PROSITE:PS50212 SMART:SM00049
SMART:SM00147 SMART:SM00229 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0007264 GO:GO:0051056
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005952 GO:GO:0008603
GO:GO:0005085 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS50042 Gene3D:1.10.840.10 InterPro:IPR023578
SUPFAM:SSF48366 PANTHER:PTHR23113 EMBL:AC019046 HOVERGEN:HBG056985
UniGene:Hs.470646 HGNC:HGNC:16626 ChiTaRS:RAPGEF4 EMBL:AC018712
EMBL:AC009484 EMBL:AC104086 EMBL:AK296340 IPI:IPI01015484
SMR:B7Z3T6 STRING:B7Z3T6 Ensembl:ENST00000538974 Uniprot:B7Z3T6
Length = 840
Score = 120 (47.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
DDL+IIY L ++AL+ +V R L V+ +E H + VL+ GE TSWYI+L GS
Sbjct: 171 DDLEIIYEELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGS 230
Query: 62 V 62
V
Sbjct: 231 V 231
>UNIPROTKB|J9P4R7 [details] [associations]
symbol:RAPGEF4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051056 "regulation of small GTPase
mediated signal transduction" evidence=IEA] [GO:0008603
"cAMP-dependent protein kinase regulator activity" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005952 "cAMP-dependent protein kinase complex"
evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange factor
activity" evidence=IEA] InterPro:IPR000159 InterPro:IPR000591
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR002373
InterPro:IPR008937 InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617
Pfam:PF00618 Pfam:PF00788 PRINTS:PR00103 PROSITE:PS00720
PROSITE:PS50009 PROSITE:PS50186 PROSITE:PS50212 SMART:SM00049
SMART:SM00147 SMART:SM00229 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0007264 GO:GO:0051056
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005952 GO:GO:0008603
GO:GO:0005085 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS50042 Gene3D:1.10.840.10 InterPro:IPR023578
SUPFAM:SSF48366 PANTHER:PTHR23113 GeneTree:ENSGT00560000077091
EMBL:AAEX03017765 EMBL:AAEX03017766 Ensembl:ENSCAFT00000048090
Uniprot:J9P4R7
Length = 858
Score = 120 (47.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
DDL+IIY L ++AL+ +V R L V+ +E H + VL+ GE TSWYI+L GS
Sbjct: 189 DDLEIIYEELIHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGS 248
Query: 62 V 62
V
Sbjct: 249 V 249
>UNIPROTKB|B7Z283 [details] [associations]
symbol:RAPGEF4 "cDNA, FLJ78971, highly similar to Rap
guanine nucleotide exchange factor 4" species:9606 "Homo sapiens"
[GO:0005952 "cAMP-dependent protein kinase complex" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0008603 "cAMP-dependent protein kinase regulator
activity" evidence=IEA] [GO:0051056 "regulation of small GTPase
mediated signal transduction" evidence=IEA] [GO:0005088 "Ras
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0017016 "Ras GTPase
binding" evidence=IEA] [GO:0017156 "calcium ion-dependent
exocytosis" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA] [GO:0019933 "cAMP-mediated signaling" evidence=IEA]
[GO:0030073 "insulin secretion" evidence=IEA] [GO:0030552 "cAMP
binding" evidence=IEA] InterPro:IPR000159 InterPro:IPR000591
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR002373
InterPro:IPR008937 InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617
Pfam:PF00618 Pfam:PF00788 PRINTS:PR00103 PROSITE:PS00720
PROSITE:PS50009 PROSITE:PS50186 PROSITE:PS50212 SMART:SM00049
SMART:SM00147 SMART:SM00229 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0005829 GO:GO:0007264
GO:GO:0007507 GO:GO:0019933 GO:GO:0016324 GO:GO:0030424
GO:GO:0051056 GO:GO:0043197 GO:GO:0016323 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005952 GO:GO:0008603 GO:GO:0050805
GO:GO:0017156 GO:GO:0001917 InterPro:IPR018490 SMART:SM00100
SUPFAM:SSF51206 PROSITE:PS50042 GO:GO:0050773 GO:GO:0030073
GO:GO:0060076 GO:GO:0001750 Gene3D:1.10.840.10 InterPro:IPR023578
SUPFAM:SSF48366 GO:GO:0014911 GO:GO:0005088 PANTHER:PTHR23113
GO:GO:0030552 GO:GO:0017157 EMBL:AC019046 HOVERGEN:HBG056985
UniGene:Hs.470646 HGNC:HGNC:16626 ChiTaRS:RAPGEF4 EMBL:AC018712
EMBL:AC009484 EMBL:AC104086 EMBL:AK294445 EMBL:AK316072
IPI:IPI01015080 SMR:B7Z283 STRING:B7Z283 Ensembl:ENST00000539331
Ensembl:ENST00000540783 Uniprot:B7Z283
Length = 858
Score = 120 (47.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
DDL+IIY L ++AL+ +V R L V+ +E H + VL+ GE TSWYI+L GS
Sbjct: 189 DDLEIIYEELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGS 248
Query: 62 V 62
V
Sbjct: 249 V 249
>ZFIN|ZDB-GENE-080219-4 [details] [associations]
symbol:zgc:171558 "zgc:171558" species:7955 "Danio
rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR000591 InterPro:IPR008937 Pfam:PF00610 PROSITE:PS50186
SMART:SM00049 Pfam:PF00027 INTERPRO:IPR000595
ZFIN:ZDB-GENE-080219-4 Gene3D:2.60.120.10 InterPro:IPR014710
GO:GO:0007264 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622
GO:GO:0005085 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS50042 PANTHER:PTHR23113 GeneTree:ENSGT00670000098574
EMBL:AL929341 IPI:IPI00889409 Ensembl:ENSDART00000111024
OMA:AVHASAH Bgee:F1QCZ6 Uniprot:F1QCZ6
Length = 427
Score = 116 (45.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 2 ADDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSG 60
A+DL+IIY L ++A++ ++V R L V+ +E H +A VL+ GE TSWYI+ G
Sbjct: 339 AEDLEIIYDELLHIKAVSHLSNTVKRELAGVLIFESHAKAGTVLFNQGEEGTSWYIIQKG 398
Query: 61 SV 62
SV
Sbjct: 399 SV 400
Score = 106 (42.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERHQANDVLYYTGELSTSWYILLSGSV 62
+D+ II L G++A + ++L+ +C YE + LY G++ TSWY +LSGS+
Sbjct: 30 EDVDIILARLKGVKAFEKFHPNLLQQICMCGFYEYLEKGITLYRQGDIGTSWYAVLSGSL 89
>UNIPROTKB|E9PB94 [details] [associations]
symbol:RAPGEF4 "Rap guanine nucleotide exchange factor 4"
species:9606 "Homo sapiens" [GO:0005952 "cAMP-dependent protein
kinase complex" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0008603 "cAMP-dependent
protein kinase regulator activity" evidence=IEA] [GO:0051056
"regulation of small GTPase mediated signal transduction"
evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange factor
activity" evidence=IEA] InterPro:IPR000159 InterPro:IPR000591
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR002373
InterPro:IPR008937 Pfam:PF00610 Pfam:PF00617 Pfam:PF00618
Pfam:PF00788 PRINTS:PR00103 PROSITE:PS50009 PROSITE:PS50186
PROSITE:PS50212 SMART:SM00049 SMART:SM00147 SMART:SM00229
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0007264 GO:GO:0051056 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005952 GO:GO:0008603 GO:GO:0005085
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS50042
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 EMBL:AC019046 HGNC:HGNC:16626 ChiTaRS:RAPGEF4
EMBL:AC018712 EMBL:AC009484 EMBL:AC104086 IPI:IPI00915793
ProteinModelPortal:E9PB94 SMR:E9PB94 Ensembl:ENST00000409036
ArrayExpress:E9PB94 Bgee:E9PB94 Uniprot:E9PB94
Length = 943
Score = 120 (47.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
DDL+IIY L ++AL+ +V R L V+ +E H + VL+ GE TSWYI+L GS
Sbjct: 342 DDLEIIYEELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGS 401
Query: 62 V 62
V
Sbjct: 402 V 402
>UNIPROTKB|F1M0P2 [details] [associations]
symbol:F1M0P2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005085 "guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR008937 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0007264 GO:GO:0005622
GO:GO:0005085 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS50042 PANTHER:PTHR23113 IPI:IPI00950801
Ensembl:ENSRNOT00000052099 Uniprot:F1M0P2
Length = 126
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 19/61 (31%), Positives = 37/61 (60%)
Query: 2 ADDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERHQANDVLYYTGELSTSWYILLSGS 61
++D+ II+ L G++A + ++LR +C YE + L+ G++ T+WY +L+GS
Sbjct: 6 SEDVDIIFTRLKGVKAFERFHPNLLRQICLCSYYENLEKGITLFRQGDIGTNWYAVLAGS 65
Query: 62 V 62
+
Sbjct: 66 L 66
>UNIPROTKB|E7EVE5 [details] [associations]
symbol:RAPGEF4 "Rap guanine nucleotide exchange factor 4"
species:9606 "Homo sapiens" [GO:0005952 "cAMP-dependent protein
kinase complex" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0008603 "cAMP-dependent
protein kinase regulator activity" evidence=IEA] [GO:0051056
"regulation of small GTPase mediated signal transduction"
evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange factor
activity" evidence=IEA] InterPro:IPR000159 InterPro:IPR000591
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR002373
InterPro:IPR008937 InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617
Pfam:PF00618 Pfam:PF00788 PRINTS:PR00103 PROSITE:PS00720
PROSITE:PS50009 PROSITE:PS50186 PROSITE:PS50212 SMART:SM00049
SMART:SM00147 SMART:SM00229 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0007264 GO:GO:0051056
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005952 GO:GO:0008603
GO:GO:0005085 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS50042 Gene3D:1.10.840.10 InterPro:IPR023578
SUPFAM:SSF48366 PANTHER:PTHR23113 EMBL:AC019046 HGNC:HGNC:16626
ChiTaRS:RAPGEF4 EMBL:AC018712 EMBL:AC009484 EMBL:AC104086
IPI:IPI00938407 ProteinModelPortal:E7EVE5 SMR:E7EVE5 PRIDE:E7EVE5
Ensembl:ENST00000264111 ArrayExpress:E7EVE5 Bgee:E7EVE5
Uniprot:E7EVE5
Length = 1010
Score = 120 (47.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
DDL+IIY L ++AL+ +V R L V+ +E H + VL+ GE TSWYI+L GS
Sbjct: 341 DDLEIIYEELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGS 400
Query: 62 V 62
V
Sbjct: 401 V 401
>UNIPROTKB|E2RFC1 [details] [associations]
symbol:RAPGEF4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051056 "regulation of small GTPase
mediated signal transduction" evidence=IEA] [GO:0008603
"cAMP-dependent protein kinase regulator activity" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005952 "cAMP-dependent protein kinase complex"
evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange factor
activity" evidence=IEA] InterPro:IPR000159 InterPro:IPR000591
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR002373
InterPro:IPR008937 InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617
Pfam:PF00618 Pfam:PF00788 PRINTS:PR00103 PROSITE:PS00720
PROSITE:PS50009 PROSITE:PS50186 PROSITE:PS50212 SMART:SM00049
SMART:SM00147 SMART:SM00229 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0007264 GO:GO:0051056
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005952 GO:GO:0008603
GO:GO:0005085 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS50042 Gene3D:1.10.840.10 InterPro:IPR023578
SUPFAM:SSF48366 PANTHER:PTHR23113 GeneTree:ENSGT00560000077091
EMBL:AAEX03017765 EMBL:AAEX03017766 Ensembl:ENSCAFT00000020803
Uniprot:E2RFC1
Length = 1011
Score = 120 (47.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
DDL+IIY L ++AL+ +V R L V+ +E H + VL+ GE TSWYI+L GS
Sbjct: 342 DDLEIIYEELIHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGS 401
Query: 62 V 62
V
Sbjct: 402 V 402
>UNIPROTKB|Q8WZA2 [details] [associations]
symbol:RAPGEF4 "Rap guanine nucleotide exchange factor 4"
species:9606 "Homo sapiens" [GO:0005952 "cAMP-dependent protein
kinase complex" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0008603 "cAMP-dependent
protein kinase regulator activity" evidence=IEA] [GO:0051056
"regulation of small GTPase mediated signal transduction"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0017156
"calcium ion-dependent exocytosis" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IEA] [GO:0019933 "cAMP-mediated
signaling" evidence=IEA] [GO:0030073 "insulin secretion"
evidence=IEA] [GO:0005088 "Ras guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0030552 "cAMP binding" evidence=ISS]
[GO:0017016 "Ras GTPase binding" evidence=ISS] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007596 "blood coagulation" evidence=TAS]
[GO:0030168 "platelet activation" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0050796 "regulation
of insulin secretion" evidence=TAS] Reactome:REACT_604
Reactome:REACT_111217 InterPro:IPR000159 InterPro:IPR000591
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR002373
InterPro:IPR008937 InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617
Pfam:PF00618 Pfam:PF00788 PRINTS:PR00103 PROSITE:PS00720
PROSITE:PS50009 PROSITE:PS50186 PROSITE:PS50212 SMART:SM00049
SMART:SM00147 SMART:SM00229 EMBL:U78516 Pfam:PF00027
INTERPRO:IPR000595 Gene3D:2.60.120.10 InterPro:IPR014710
GO:GO:0005829 GO:GO:0005886 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0007264 GO:GO:0030168 GO:GO:0007507
GO:GO:0044281 GO:GO:0019933 GO:GO:0016324 GO:GO:0030424
GO:GO:0051056 GO:GO:0043197 GO:GO:0016323 GO:GO:0007186
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005952 GO:GO:0006112
GO:GO:0008603 GO:GO:0050796 GO:GO:0050805 GO:GO:0017156
GO:GO:0001917 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS00888 PROSITE:PS00889 PROSITE:PS50042 GO:GO:0050773
GO:GO:0030073 GO:GO:0060076 GO:GO:0001750 Gene3D:1.10.840.10
InterPro:IPR023578 SUPFAM:SSF48366 GO:GO:0014911 GO:GO:0005088
PANTHER:PTHR23113 GO:GO:0030552 GO:GO:0017157 eggNOG:COG0664
GO:GO:0017016 HOGENOM:HOG000230545 HOVERGEN:HBG056985 EMBL:AB027471
EMBL:AK304278 EMBL:AK313084 EMBL:BC024004 EMBL:BC040183
IPI:IPI00329560 IPI:IPI00329561 IPI:IPI00329562
RefSeq:NP_001093867.1 RefSeq:NP_008954.2 UniGene:Hs.470646
ProteinModelPortal:Q8WZA2 SMR:Q8WZA2 IntAct:Q8WZA2
MINT:MINT-2869318 STRING:Q8WZA2 PhosphoSite:Q8WZA2 DMDM:32171491
PaxDb:Q8WZA2 PRIDE:Q8WZA2 DNASU:11069 Ensembl:ENST00000397081
Ensembl:ENST00000397087 GeneID:11069 KEGG:hsa:11069 UCSC:uc002uhv.4
UCSC:uc002uhw.4 CTD:11069 GeneCards:GC02P173600 HGNC:HGNC:16626
HPA:CAB004388 MIM:606058 neXtProt:NX_Q8WZA2 PharmGKB:PA134861108
InParanoid:Q8WZA2 KO:K04351 OMA:TIYDWEL OrthoDB:EOG4W0XC9
ChiTaRS:RAPGEF4 GenomeRNAi:11069 NextBio:42080 ArrayExpress:Q8WZA2
Bgee:Q8WZA2 CleanEx:HS_RAPGEF4 Genevestigator:Q8WZA2
GermOnline:ENSG00000091428 Uniprot:Q8WZA2
Length = 1011
Score = 120 (47.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
DDL+IIY L ++AL+ +V R L V+ +E H + VL+ GE TSWYI+L GS
Sbjct: 342 DDLEIIYEELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGS 401
Query: 62 V 62
V
Sbjct: 402 V 402
>MGI|MGI:1917723 [details] [associations]
symbol:Rapgef4 "Rap guanine nucleotide exchange factor (GEF)
4" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001750 "photoreceptor outer segment"
evidence=ISO] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0001932 "regulation of protein phosphorylation"
evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange factor
activity" evidence=ISO;IDA] [GO:0005088 "Ras guanyl-nucleotide
exchange factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005952 "cAMP-dependent protein kinase complex" evidence=IEA]
[GO:0006887 "exocytosis" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0008603 "cAMP-dependent
protein kinase regulator activity" evidence=IEA] [GO:0014911
"positive regulation of smooth muscle cell migration" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016323 "basolateral
plasma membrane" evidence=ISO] [GO:0016324 "apical plasma membrane"
evidence=ISO] [GO:0017016 "Ras GTPase binding" evidence=IPI]
[GO:0017156 "calcium ion-dependent exocytosis" evidence=IDA]
[GO:0017157 "regulation of exocytosis" evidence=IDA] [GO:0019933
"cAMP-mediated signaling" evidence=IDA] [GO:0030073 "insulin
secretion" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030552 "cAMP binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0050773 "regulation
of dendrite development" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=IDA] [GO:0050805 "negative regulation
of synaptic transmission" evidence=ISO] [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0060076 "excitatory synapse" evidence=ISO] InterPro:IPR000159
InterPro:IPR000591 InterPro:IPR000651 InterPro:IPR001895
InterPro:IPR002373 InterPro:IPR008937 InterPro:IPR019804
Pfam:PF00610 Pfam:PF00617 Pfam:PF00618 Pfam:PF00788 PRINTS:PR00103
PROSITE:PS00720 PROSITE:PS50009 PROSITE:PS50186 PROSITE:PS50212
SMART:SM00049 SMART:SM00147 SMART:SM00229 EMBL:AF115480
Pfam:PF00027 MGI:MGI:1917723 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0005829 GO:GO:0007264 GO:GO:0007507
GO:GO:0019933 GO:GO:0016324 GO:GO:0030424 GO:GO:0051056
GO:GO:0043197 GO:GO:0016323 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0005952 GO:GO:0008603 GO:GO:0050805 GO:GO:0017156
GO:GO:0001917 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS00888 PROSITE:PS00889 PROSITE:PS50042 GO:GO:0050773
GO:GO:0030073 GO:GO:0060076 GO:GO:0001750 Gene3D:1.10.840.10
InterPro:IPR023578 SUPFAM:SSF48366 GO:GO:0014911 GO:GO:0005088
PANTHER:PTHR23113 GO:GO:0030552 GO:GO:0017157 eggNOG:COG0664
PDB:3CF6 PDBsum:3CF6 GeneTree:ENSGT00560000077091
HOGENOM:HOG000230545 HOVERGEN:HBG056985 CTD:11069 KO:K04351
OMA:TIYDWEL OrthoDB:EOG4W0XC9 EMBL:AB021132 EMBL:AB037668
EMBL:AK004874 IPI:IPI00270362 IPI:IPI00323505 IPI:IPI00623205
RefSeq:NP_001191094.1 RefSeq:NP_001191095.1 RefSeq:NP_062662.1
UniGene:Mm.196153 PDB:1O7F PDB:2BYV PDB:4F7Z PDBsum:1O7F
PDBsum:2BYV PDBsum:4F7Z ProteinModelPortal:Q9EQZ6 SMR:Q9EQZ6
DIP:DIP-32333N IntAct:Q9EQZ6 STRING:Q9EQZ6 PhosphoSite:Q9EQZ6
PaxDb:Q9EQZ6 PRIDE:Q9EQZ6 Ensembl:ENSMUST00000090826
Ensembl:ENSMUST00000102698 GeneID:56508 KEGG:mmu:56508
InParanoid:Q9EQZ6 EvolutionaryTrace:Q9EQZ6 NextBio:312814
Bgee:Q9EQZ6 CleanEx:MM_RAPGEF4 Genevestigator:Q9EQZ6
GermOnline:ENSMUSG00000049044 Uniprot:Q9EQZ6
Length = 1011
Score = 119 (46.9 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
DDL+IIY L ++AL+ +V R L V+ +E H + VL+ GE TSWYI+L GS
Sbjct: 342 DDLEIIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGS 401
Query: 62 V 62
V
Sbjct: 402 V 402
Score = 107 (42.7 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 19/61 (31%), Positives = 37/61 (60%)
Query: 2 ADDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERHQANDVLYYTGELSTSWYILLSGS 61
++D+ II+ L G++A + ++LR +C YE + L+ G++ T+WY +L+GS
Sbjct: 28 SEDVDIIFTRLKGVKAFEKFHPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGS 87
Query: 62 V 62
+
Sbjct: 88 L 88
>UNIPROTKB|H9KZE9 [details] [associations]
symbol:H9KZE9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005952 "cAMP-dependent protein kinase complex"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008603 "cAMP-dependent protein
kinase regulator activity" evidence=IEA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
InterPro:IPR000591 InterPro:IPR001895 InterPro:IPR002373
InterPro:IPR008937 InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617
PRINTS:PR00103 PROSITE:PS00720 PROSITE:PS50009 PROSITE:PS50186
SMART:SM00049 SMART:SM00147 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0007264
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005952 GO:GO:0008603
GO:GO:0005085 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS50042 Gene3D:1.10.840.10 InterPro:IPR023578
SUPFAM:SSF48366 PANTHER:PTHR23113 GeneTree:ENSGT00560000077091
OMA:NSFFAVM EMBL:AADN02072394 EMBL:AADN02072395 EMBL:AADN02072396
EMBL:AADN02072397 EMBL:AADN02072398 Ensembl:ENSGALT00000010260
Uniprot:H9KZE9
Length = 766
Score = 117 (46.2 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERHQ-ANDVLYYTGELSTSWYILLSGS 61
D+L++I+ L ++A+A +SV R L V+ +E HQ A VL+ G+ TSWYI+ GS
Sbjct: 158 DELELIFEELLHIKAVAHLSNSVKRELASVLMFESHQRAGTVLFSQGDKGTSWYIVWKGS 217
Query: 62 V 62
V
Sbjct: 218 V 218
>UNIPROTKB|F1PW07 [details] [associations]
symbol:RAPGEF3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051056 "regulation of small GTPase
mediated signal transduction" evidence=IEA] [GO:0008603
"cAMP-dependent protein kinase regulator activity" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005952 "cAMP-dependent protein kinase complex"
evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange factor
activity" evidence=IEA] InterPro:IPR000591 InterPro:IPR000651
InterPro:IPR001895 InterPro:IPR002373 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617 Pfam:PF00618
PRINTS:PR00103 PROSITE:PS00720 PROSITE:PS50009 PROSITE:PS50186
PROSITE:PS50212 SMART:SM00049 SMART:SM00147 SMART:SM00229
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0007264 GO:GO:0051056 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005952 GO:GO:0008603 GO:GO:0005085
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS50042
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 GeneTree:ENSGT00560000077091 OMA:NSFFAVM
EMBL:AAEX03015096 Ensembl:ENSCAFT00000014611 Uniprot:F1PW07
Length = 905
Score = 106 (42.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
++L +I+ L ++A+A +SV R L V+ +E H +A VL+ G+ TSWYI+ GS
Sbjct: 230 EELDLIFEELLHIKAVAHLSNSVKRELAAVLLFEPHSKAGTVLFSQGDKGTSWYIIWKGS 289
Query: 62 V 62
V
Sbjct: 290 V 290
Score = 33 (16.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 90 NPSVSMAAKVSTLWDPG 106
N S M A+ +W PG
Sbjct: 525 NASPQMKARNMPVWLPG 541
>ZFIN|ZDB-GENE-090312-38 [details] [associations]
symbol:rapgef3 "Rap guanine nucleotide exchange
factor (GEF) 3" species:7955 "Danio rerio" [GO:0051056 "regulation
of small GTPase mediated signal transduction" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0008603 "cAMP-dependent protein kinase regulator activity"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0001932 "regulation of protein phosphorylation"
evidence=IEA] [GO:0005952 "cAMP-dependent protein kinase complex"
evidence=IEA] InterPro:IPR000591 InterPro:IPR000651
InterPro:IPR001895 InterPro:IPR002373 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617 Pfam:PF00618
PRINTS:PR00103 PROSITE:PS00720 PROSITE:PS50009 PROSITE:PS50186
PROSITE:PS50212 SMART:SM00049 SMART:SM00147 SMART:SM00229
Pfam:PF00027 INTERPRO:IPR000595 ZFIN:ZDB-GENE-090312-38
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0007264 GO:GO:0051056
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005952 GO:GO:0008603
GO:GO:0005085 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS50042 Gene3D:1.10.840.10 InterPro:IPR023578
SUPFAM:SSF48366 PANTHER:PTHR23113 EMBL:CR293512
GeneTree:ENSGT00560000077091 IPI:IPI00806392
Ensembl:ENSDART00000114423 Uniprot:E7FDC9
Length = 885
Score = 110 (43.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
+DL++IY L ++A+A SV + L V+ +E H +A VL+ G+ TSWYI+ GS
Sbjct: 206 EDLEVIYEELLHVKAVAHLSTSVRKELASVLVFESHAKAGTVLFSQGDKGTSWYIIWRGS 265
Query: 62 V 62
V
Sbjct: 266 V 266
>UNIPROTKB|F1Q0Q1 [details] [associations]
symbol:RAPGEF3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051056 "regulation of small GTPase
mediated signal transduction" evidence=IEA] [GO:0008603
"cAMP-dependent protein kinase regulator activity" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005952 "cAMP-dependent protein kinase complex"
evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange factor
activity" evidence=IEA] InterPro:IPR000591 InterPro:IPR000651
InterPro:IPR002373 InterPro:IPR008937 Pfam:PF00610 Pfam:PF00618
PRINTS:PR00103 PROSITE:PS50186 PROSITE:PS50212 SMART:SM00049
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0007264 GO:GO:0051056 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005952 GO:GO:0008603 GO:GO:0005085
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS50042
InterPro:IPR023578 SUPFAM:SSF48366 PANTHER:PTHR23113
GeneTree:ENSGT00560000077091 EMBL:AAEX03015096
Ensembl:ENSCAFT00000039555 Uniprot:F1Q0Q1
Length = 496
Score = 106 (42.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
++L +I+ L ++A+A +SV R L V+ +E H +A VL+ G+ TSWYI+ GS
Sbjct: 231 EELDLIFEELLHIKAVAHLSNSVKRELAAVLLFEPHSKAGTVLFSQGDKGTSWYIIWKGS 290
Query: 62 V 62
V
Sbjct: 291 V 291
>UNIPROTKB|F8VRX1 [details] [associations]
symbol:RAPGEF3 "Rap guanine nucleotide exchange factor 3"
species:9606 "Homo sapiens" [GO:0005952 "cAMP-dependent protein
kinase complex" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0008603 "cAMP-dependent
protein kinase regulator activity" evidence=IEA] [GO:0051056
"regulation of small GTPase mediated signal transduction"
evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange factor
activity" evidence=IEA] InterPro:IPR000591 InterPro:IPR000651
InterPro:IPR001895 InterPro:IPR002373 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617 Pfam:PF00618
PRINTS:PR00103 PROSITE:PS00720 PROSITE:PS50009 PROSITE:PS50186
PROSITE:PS50212 SMART:SM00049 SMART:SM00147 SMART:SM00229
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0007264 GO:GO:0051056 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005952 GO:GO:0008603 GO:GO:0005085
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS50042
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 EMBL:AC004241 HGNC:HGNC:16629 ChiTaRS:RAPGEF3
EMBL:AC137054 IPI:IPI00922346 ProteinModelPortal:F8VRX1 SMR:F8VRX1
Ensembl:ENST00000548919 ArrayExpress:F8VRX1 Bgee:F8VRX1
Uniprot:F8VRX1
Length = 814
Score = 106 (42.4 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
++L +I+ L ++A+A +SV R L V+ +E H +A VL+ G+ TSWYI+ GS
Sbjct: 189 EELDLIFEELLHIKAVAHLSNSVKRELAAVLLFEPHSKAGTVLFSQGDKGTSWYIIWKGS 248
Query: 62 V 62
V
Sbjct: 249 V 249
>UNIPROTKB|H7BYQ1 [details] [associations]
symbol:RAPGEF3 "Rap guanine nucleotide exchange factor 3"
species:9606 "Homo sapiens" [GO:0005952 "cAMP-dependent protein
kinase complex" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0008603 "cAMP-dependent
protein kinase regulator activity" evidence=IEA] [GO:0051056
"regulation of small GTPase mediated signal transduction"
evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange factor
activity" evidence=IEA] InterPro:IPR000591 InterPro:IPR000651
InterPro:IPR001895 InterPro:IPR002373 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617 Pfam:PF00618
PRINTS:PR00103 PROSITE:PS00720 PROSITE:PS50009 PROSITE:PS50186
PROSITE:PS50212 SMART:SM00049 SMART:SM00147 SMART:SM00229
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0007264 GO:GO:0051056 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005952 GO:GO:0008603 GO:GO:0005085
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS50042
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 EMBL:AC004241 HGNC:HGNC:16629 ChiTaRS:RAPGEF3
EMBL:AC137054 ProteinModelPortal:H7BYQ1 SMR:H7BYQ1
Ensembl:ENST00000397089 Bgee:H7BYQ1 Uniprot:H7BYQ1
Length = 868
Score = 106 (42.4 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
++L +I+ L ++A+A +SV R L V+ +E H +A VL+ G+ TSWYI+ GS
Sbjct: 243 EELDLIFEELLHIKAVAHLSNSVKRELAAVLLFEPHSKAGTVLFSQGDKGTSWYIIWKGS 302
Query: 62 V 62
V
Sbjct: 303 V 303
>UNIPROTKB|E7EQC8 [details] [associations]
symbol:RAPGEF3 "Rap guanine nucleotide exchange factor 3"
species:9606 "Homo sapiens" [GO:0005952 "cAMP-dependent protein
kinase complex" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0008603 "cAMP-dependent
protein kinase regulator activity" evidence=IEA] [GO:0051056
"regulation of small GTPase mediated signal transduction"
evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange factor
activity" evidence=IEA] InterPro:IPR000591 InterPro:IPR000651
InterPro:IPR001895 InterPro:IPR002373 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617 Pfam:PF00618
PRINTS:PR00103 PROSITE:PS00720 PROSITE:PS50009 PROSITE:PS50186
PROSITE:PS50212 SMART:SM00049 SMART:SM00147 SMART:SM00229
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0007264 GO:GO:0051056 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005952 GO:GO:0008603 GO:GO:0005085
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS50042
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 EMBL:AC004241 HGNC:HGNC:16629 ChiTaRS:RAPGEF3
EMBL:AC137054 IPI:IPI00783200 SMR:E7EQC8 Ensembl:ENST00000171000
Ensembl:ENST00000389211 Ensembl:ENST00000405493
Ensembl:ENST00000549151 Uniprot:E7EQC8
Length = 881
Score = 106 (42.4 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
++L +I+ L ++A+A +SV R L V+ +E H +A VL+ G+ TSWYI+ GS
Sbjct: 189 EELDLIFEELLHIKAVAHLSNSVKRELAAVLLFEPHSKAGTVLFSQGDKGTSWYIIWKGS 248
Query: 62 V 62
V
Sbjct: 249 V 249
>MGI|MGI:2441741 [details] [associations]
symbol:Rapgef3 "Rap guanine nucleotide exchange factor (GEF)
3" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0001932
"regulation of protein phosphorylation" evidence=IEA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005952 "cAMP-dependent protein kinase complex"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008603 "cAMP-dependent protein
kinase regulator activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030552 "cAMP binding" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA] [GO:0045766
"positive regulation of angiogenesis" evidence=ISO] [GO:0050790
"regulation of catalytic activity" evidence=IDA] [GO:0051056
"regulation of small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR000591 InterPro:IPR000651
InterPro:IPR001895 InterPro:IPR002373 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617 Pfam:PF00618
PRINTS:PR00103 PROSITE:PS00720 PROSITE:PS50009 PROSITE:PS50186
PROSITE:PS50212 SMART:SM00049 SMART:SM00147 SMART:SM00229
Pfam:PF00027 MGI:MGI:2441741 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0005737 GO:GO:0007264 GO:GO:0016020
GO:GO:0051056 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005952
GO:GO:0008603 GO:GO:0001525 GO:GO:0045766 GO:GO:0005085
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 Gene3D:1.10.840.10
InterPro:IPR023578 SUPFAM:SSF48366 PANTHER:PTHR23113 GO:GO:0030552
eggNOG:NOG236726 GeneTree:ENSGT00560000077091 HOGENOM:HOG000230545
OMA:NSFFAVM OrthoDB:EOG4WDDB1 ChiTaRS:RAPGEF3 EMBL:BC020532
EMBL:BC020311 EMBL:AK034265 IPI:IPI00331717 IPI:IPI00757993
RefSeq:NP_001171281.1 RefSeq:NP_001171282.1 RefSeq:NP_659099.2
UniGene:Mm.24028 ProteinModelPortal:Q8VCC8 SMR:Q8VCC8 STRING:Q8VCC8
PhosphoSite:Q8VCC8 PaxDb:Q8VCC8 PRIDE:Q8VCC8
Ensembl:ENSMUST00000126854 Ensembl:ENSMUST00000129223 GeneID:223864
KEGG:mmu:223864 UCSC:uc007xkz.2 UCSC:uc007xla.2 CTD:10411
HOVERGEN:HBG056985 InParanoid:Q8VCC8 KO:K08014 NextBio:376937
Bgee:Q8VCC8 CleanEx:MM_RAPGEF3 Genevestigator:Q8VCC8
GermOnline:ENSMUSG00000022469 Uniprot:Q8VCC8
Length = 918
Score = 106 (42.4 bits), Expect = 0.00010, P = 0.00010
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
++L +I+ L ++A+A +SV R L V+ +E H +A VL+ G+ TSWYI+ GS
Sbjct: 231 EELDLIFEELLHIKAVAHLSNSVKRELAAVLLFEPHSKAGTVLFSQGDKGTSWYIIWKGS 290
Query: 62 V 62
V
Sbjct: 291 V 291
>UNIPROTKB|F1ME49 [details] [associations]
symbol:RAPGEF3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045766 "positive regulation of angiogenesis"
evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0051056 "regulation of small GTPase
mediated signal transduction" evidence=IEA] [GO:0008603
"cAMP-dependent protein kinase regulator activity" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005952 "cAMP-dependent protein kinase complex"
evidence=IEA] InterPro:IPR000591 InterPro:IPR000651
InterPro:IPR001895 InterPro:IPR002373 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617 Pfam:PF00618
PRINTS:PR00103 PROSITE:PS00720 PROSITE:PS50009 PROSITE:PS50186
PROSITE:PS50212 SMART:SM00049 SMART:SM00147 SMART:SM00229
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0007264 GO:GO:0051056 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005952 GO:GO:0008603 GO:GO:0045766
GO:GO:0005085 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS50042 Gene3D:1.10.840.10 InterPro:IPR023578
SUPFAM:SSF48366 PANTHER:PTHR23113 GeneTree:ENSGT00560000077091
OMA:NSFFAVM EMBL:DAAA02012987 IPI:IPI00701019 UniGene:Bt.96694
Ensembl:ENSBTAT00000008976 Uniprot:F1ME49
Length = 923
Score = 106 (42.4 bits), Expect = 0.00010, P = 0.00010
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
++L +I+ L ++A+A +SV R L V+ +E H +A VL+ G+ TSWYI+ GS
Sbjct: 231 EELDLIFEELLHIKAVAHLSNSVKRELAAVLLFEPHSKAGTVLFSQGDKGTSWYIIWKGS 290
Query: 62 V 62
V
Sbjct: 291 V 291
>UNIPROTKB|O95398 [details] [associations]
symbol:RAPGEF3 "Rap guanine nucleotide exchange factor 3"
species:9606 "Homo sapiens" [GO:0005952 "cAMP-dependent protein
kinase complex" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0008603 "cAMP-dependent
protein kinase regulator activity" evidence=IEA] [GO:0051056
"regulation of small GTPase mediated signal transduction"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0030552
"cAMP binding" evidence=IEA] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0012505 "endomembrane
system" evidence=IEA] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0008283 "cell proliferation" evidence=TAS]
[GO:0045766 "positive regulation of angiogenesis" evidence=IMP]
[GO:0016020 "membrane" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007596 "blood coagulation" evidence=TAS]
[GO:0030168 "platelet activation" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0050796 "regulation
of insulin secretion" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] Reactome:REACT_604 Reactome:REACT_111217
InterPro:IPR000591 InterPro:IPR000651 InterPro:IPR001895
InterPro:IPR002373 InterPro:IPR008937 InterPro:IPR019804
Pfam:PF00610 Pfam:PF00617 Pfam:PF00618 PRINTS:PR00103
PROSITE:PS00720 PROSITE:PS50009 PROSITE:PS50186 PROSITE:PS50212
SMART:SM00049 SMART:SM00147 SMART:SM00229 Pfam:PF00027
INTERPRO:IPR000595 Gene3D:2.60.120.10 InterPro:IPR014710
GO:GO:0005886 Reactome:REACT_111102 Reactome:REACT_6900
GO:GO:0007165 GO:GO:0007264 GO:GO:0030168 GO:GO:0044281
GO:GO:0008283 GO:GO:0051056 GO:GO:0012505 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005952 GO:GO:0006112 GO:GO:0008603
GO:GO:0001525 GO:GO:0045766 GO:GO:0050796 GO:GO:0005085
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 Gene3D:1.10.840.10
InterPro:IPR023578 SUPFAM:SSF48366 PANTHER:PTHR23113 GO:GO:0030552
eggNOG:COG0664 EMBL:AC004241 HOGENOM:HOG000230545 EMBL:U78168
EMBL:U78169 EMBL:BC017728 EMBL:AF103905 IPI:IPI00329727
IPI:IPI00793799 UniGene:Hs.8578 ProteinModelPortal:O95398
SMR:O95398 IntAct:O95398 MINT:MINT-6741771 STRING:O95398
PhosphoSite:O95398 PRIDE:O95398 Ensembl:ENST00000389212
Ensembl:ENST00000395358 Ensembl:ENST00000449771 UCSC:uc001rpz.4
UCSC:uc001rqb.3 GeneCards:GC12M048128 HGNC:HGNC:16629 HPA:CAB004386
MIM:606057 neXtProt:NX_O95398 PharmGKB:PA134910959
InParanoid:O95398 OMA:NSFFAVM OrthoDB:EOG4WDDB1 ChiTaRS:RAPGEF3
NextBio:39461 ArrayExpress:O95398 Bgee:O95398 CleanEx:HS_RAPGEF3
Genevestigator:O95398 GermOnline:ENSG00000079337 Uniprot:O95398
Length = 923
Score = 106 (42.4 bits), Expect = 0.00010, P = 0.00010
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
++L +I+ L ++A+A +SV R L V+ +E H +A VL+ G+ TSWYI+ GS
Sbjct: 231 EELDLIFEELLHIKAVAHLSNSVKRELAAVLLFEPHSKAGTVLFSQGDKGTSWYIIWKGS 290
Query: 62 V 62
V
Sbjct: 291 V 291
>RGD|621869 [details] [associations]
symbol:Rapgef3 "Rap guanine nucleotide exchange factor (GEF) 3"
species:10116 "Rattus norvegicus" [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange factor
activity" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005952 "cAMP-dependent protein kinase complex" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0008603 "cAMP-dependent protein kinase regulator
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030552 "cAMP binding" evidence=IEA] [GO:0045766 "positive
regulation of angiogenesis" evidence=IEA;ISO;ISS] [GO:0050790
"regulation of catalytic activity" evidence=ISO] [GO:0051056
"regulation of small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR000591 InterPro:IPR000651
InterPro:IPR001895 InterPro:IPR002373 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617 Pfam:PF00618
PRINTS:PR00103 PROSITE:PS00720 PROSITE:PS50009 PROSITE:PS50186
PROSITE:PS50212 SMART:SM00049 SMART:SM00147 SMART:SM00229
Pfam:PF00027 RGD:621869 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0005737 GO:GO:0007264 GO:GO:0016020
GO:GO:0051056 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005952
GO:GO:0008603 GO:GO:0001525 GO:GO:0045766 GO:GO:0005085
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 Gene3D:1.10.840.10
InterPro:IPR023578 SUPFAM:SSF48366 PANTHER:PTHR23113 GO:GO:0030552
eggNOG:NOG236726 HOGENOM:HOG000230545 CTD:10411 HOVERGEN:HBG056985
KO:K08014 EMBL:AABR03056109 EMBL:AABR03058672 EMBL:U78167
IPI:IPI00193442 IPI:IPI00896768 RefSeq:NP_067722.1 UniGene:Rn.42899
ProteinModelPortal:Q9Z1C8 SMR:Q9Z1C8 STRING:Q9Z1C8 GeneID:59326
KEGG:rno:59326 UCSC:RGD:621869 InParanoid:Q9Z1C8 NextBio:611921
ArrayExpress:Q9Z1C8 Genevestigator:Q9Z1C8
GermOnline:ENSRNOG00000007199 Uniprot:Q9Z1C8
Length = 926
Score = 106 (42.4 bits), Expect = 0.00010, P = 0.00010
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
++L +I+ L ++A+A +SV R L V+ +E H +A VL+ G+ TSWYI+ GS
Sbjct: 231 EELDLIFEELVHIKAVAHLSNSVKRELAAVLLFEPHSKAGTVLFSQGDKGTSWYIIWKGS 290
Query: 62 V 62
V
Sbjct: 291 V 291
>UNIPROTKB|F1LSI3 [details] [associations]
symbol:Rapgef3 "Rap guanine nucleotide exchange factor 3"
species:10116 "Rattus norvegicus" [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005952 "cAMP-dependent
protein kinase complex" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0008603
"cAMP-dependent protein kinase regulator activity" evidence=IEA]
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR000591 InterPro:IPR000651
InterPro:IPR001895 InterPro:IPR002373 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617 Pfam:PF00618
PRINTS:PR00103 PROSITE:PS00720 PROSITE:PS50009 PROSITE:PS50186
PROSITE:PS50212 SMART:SM00049 SMART:SM00147 SMART:SM00229
Pfam:PF00027 RGD:621869 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0007264 GO:GO:0051056 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005952 GO:GO:0008603 GO:GO:0045766
GO:GO:0005085 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS50042 Gene3D:1.10.840.10 InterPro:IPR023578
SUPFAM:SSF48366 PANTHER:PTHR23113 GeneTree:ENSGT00560000077091
IPI:IPI01016544 Ensembl:ENSRNOT00000067767 ArrayExpress:F1LSI3
Uniprot:F1LSI3
Length = 926
Score = 106 (42.4 bits), Expect = 0.00010, P = 0.00010
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
++L +I+ L ++A+A +SV R L V+ +E H +A VL+ G+ TSWYI+ GS
Sbjct: 231 EELDLIFEELLHIKAVAHLSNSVKRELAAVLLFEPHSKAGTVLFSQGDKGTSWYIIWKGS 290
Query: 62 V 62
V
Sbjct: 291 V 291
>UNIPROTKB|Q9Z1C8 [details] [associations]
symbol:Rapgef3 "Rap guanine nucleotide exchange factor 3"
species:10116 "Rattus norvegicus" [GO:0005952 "cAMP-dependent
protein kinase complex" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0008603
"cAMP-dependent protein kinase regulator activity" evidence=IEA]
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR000591 InterPro:IPR000651
InterPro:IPR001895 InterPro:IPR002373 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617 Pfam:PF00618
PRINTS:PR00103 PROSITE:PS00720 PROSITE:PS50009 PROSITE:PS50186
PROSITE:PS50212 SMART:SM00049 SMART:SM00147 SMART:SM00229
Pfam:PF00027 RGD:621869 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0005737 GO:GO:0007264 GO:GO:0016020
GO:GO:0051056 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005952
GO:GO:0008603 GO:GO:0001525 GO:GO:0045766 GO:GO:0005085
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 Gene3D:1.10.840.10
InterPro:IPR023578 SUPFAM:SSF48366 PANTHER:PTHR23113 GO:GO:0030552
eggNOG:NOG236726 HOGENOM:HOG000230545 CTD:10411 HOVERGEN:HBG056985
KO:K08014 EMBL:AABR03056109 EMBL:AABR03058672 EMBL:U78167
IPI:IPI00193442 IPI:IPI00896768 RefSeq:NP_067722.1 UniGene:Rn.42899
ProteinModelPortal:Q9Z1C8 SMR:Q9Z1C8 STRING:Q9Z1C8 GeneID:59326
KEGG:rno:59326 UCSC:RGD:621869 InParanoid:Q9Z1C8 NextBio:611921
ArrayExpress:Q9Z1C8 Genevestigator:Q9Z1C8
GermOnline:ENSRNOG00000007199 Uniprot:Q9Z1C8
Length = 926
Score = 106 (42.4 bits), Expect = 0.00010, P = 0.00010
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 3 DDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSGS 61
++L +I+ L ++A+A +SV R L V+ +E H +A VL+ G+ TSWYI+ GS
Sbjct: 231 EELDLIFEELVHIKAVAHLSNSVKRELAAVLLFEPHSKAGTVLFSQGDKGTSWYIIWKGS 290
Query: 62 V 62
V
Sbjct: 291 V 291
>UNIPROTKB|I3LVD8 [details] [associations]
symbol:I3LVD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
InterPro:IPR008937 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0007264 GO:GO:0005622
GO:GO:0005085 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS50042 PANTHER:PTHR23113 EMBL:AEMK01181482
EMBL:AEMK01193505 EMBL:CU463894 EMBL:CU693427
Ensembl:ENSSSCT00000031710 GeneTree:ENSGT00670000098574 OMA:TIICKER
Uniprot:I3LVD8
Length = 179
Score = 94 (38.1 bits), Expect = 0.00012, P = 0.00012
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 2 ADDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERHQANDVLYYTGELSTSWYILLSGS 61
++D+ II+ L ++A + ++L +C YE + L+ G++ T+WY +L+GS
Sbjct: 28 SEDVDIIFTRLKEVKAFEKFHPNLLHQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGS 87
Query: 62 V 62
+
Sbjct: 88 L 88
>FB|FBgn0085421 [details] [associations]
symbol:Epac "Exchange protein directly activated by cAMP
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0017132 "cyclic nucleotide-dependent guanyl-nucleotide exchange
factor activity" evidence=ISS] [GO:0017034 "Rap guanyl-nucleotide
exchange factor activity" evidence=ISS] [GO:0008603 "cAMP-dependent
protein kinase regulator activity" evidence=IEA] [GO:0001932
"regulation of protein phosphorylation" evidence=IEA] [GO:0005952
"cAMP-dependent protein kinase complex" evidence=IEA] [GO:0051056
"regulation of small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR000159 InterPro:IPR000591
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR002373
InterPro:IPR008937 InterPro:IPR019804 Pfam:PF00610 Pfam:PF00617
Pfam:PF00618 Pfam:PF00788 PRINTS:PR00103 PROSITE:PS00720
PROSITE:PS50009 PROSITE:PS50186 PROSITE:PS50200 PROSITE:PS50212
SMART:SM00049 SMART:SM00147 SMART:SM00229 Pfam:PF00027
INTERPRO:IPR000595 Gene3D:2.60.120.10 InterPro:IPR014710
EMBL:AE013599 GO:GO:0007264 GO:GO:0051056 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005952 GO:GO:0004691 GO:GO:0008603
GO:GO:0005085 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS50042 Gene3D:1.10.840.10 InterPro:IPR023578
SUPFAM:SSF48366 PANTHER:PTHR23113 eggNOG:COG0664 ChiTaRS:RAPGEF3
KO:K04351 OMA:TIYDWEL RefSeq:NP_001097202.1 UniGene:Dm.4217
ProteinModelPortal:A1Z6P8 SMR:A1Z6P8 STRING:A1Z6P8 PaxDb:A1Z6P8
GeneID:35588 KEGG:dme:Dmel_CG34392 UCSC:CG34392-RC CTD:35588
FlyBase:FBgn0085421 InParanoid:A1Z6P8 OrthoDB:EOG400004
PhylomeDB:A1Z6P8 GenomeRNAi:35588 NextBio:794171 Bgee:A1Z6P8
Uniprot:A1Z6P8
Length = 998
Score = 103 (41.3 bits), Expect = 0.00023, P = 0.00023
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 2 ADDLQIIYYGLHGLEALAPYRDSVLRSLCRVVRYERH-QANDVLYYTGELSTSWYILLSG 60
+++L++++ L + AL+ S+ R L + +E H QA +L+ G+ SWYILL G
Sbjct: 329 SEELELVFEELVHIAALSHLSTSIKRELSSIFVFEAHAQAGTILFNQGDEGRSWYILLKG 388
Query: 61 SV 62
SV
Sbjct: 389 SV 390
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.139 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 114 114 0.00091 102 3 11 22 0.41 30
29 0.44 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 46
No. of states in DFA: 578 (61 KB)
Total size of DFA: 125 KB (2079 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.41u 0.11s 11.52t Elapsed: 00:00:00
Total cpu time: 11.41u 0.11s 11.52t Elapsed: 00:00:00
Start: Thu Aug 15 15:25:40 2013 End: Thu Aug 15 15:25:40 2013