BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8812
(142 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q80XK6|ATG2B_MOUSE Autophagy-related protein 2 homolog B OS=Mus musculus GN=Atg2b PE=1
SV=3
Length = 2075
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 78/94 (82%)
Query: 43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
LLG +KL S+ +EW DI KNQLP +LGGVGPM+SLVQL QG++DL WLPIEQY+KDGR
Sbjct: 1858 LLGIDKLFSYAISEWLSDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGR 1917
Query: 103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
IVRG QRGA SF TSTAMAALELT R+V IQ++
Sbjct: 1918 IVRGFQRGAASFGTSTAMAALELTNRMVQTIQAA 1951
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 3 VRHPVMTTSKATSNVLGGVKSQLVPDARKEAAHKWRTDE 41
V P++ ++ATSNVLGG+++Q+ PD R++ + KWR E
Sbjct: 2036 VVRPLIVATEATSNVLGGMRNQIRPDVRQDESQKWRHGE 2074
>sp|Q96BY7|ATG2B_HUMAN Autophagy-related protein 2 homolog B OS=Homo sapiens GN=ATG2B PE=1
SV=5
Length = 2078
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 77/94 (81%)
Query: 43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
LLG +KL S+ EW DI KNQLP +LGGVGPM+SLVQL QG++DL WLPIEQY+KDGR
Sbjct: 1861 LLGVDKLFSYAITEWLNDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGR 1920
Query: 103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
IVRG QRGA SF TSTAMAALELT R+V IQ++
Sbjct: 1921 IVRGFQRGAASFGTSTAMAALELTNRMVQTIQAA 1954
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 28/36 (77%)
Query: 3 VRHPVMTTSKATSNVLGGVKSQLVPDARKEAAHKWR 38
V P++ ++ATSNVLGG+++Q+ PD R++ + KWR
Sbjct: 2039 VVKPLIVATEATSNVLGGMRNQIRPDVRQDESQKWR 2074
>sp|Q08D51|ATG2A_XENTR Autophagy-related protein 2 homolog A OS=Xenopus tropicalis GN=atg2a
PE=2 SV=1
Length = 1997
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/94 (69%), Positives = 79/94 (84%)
Query: 43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
LLG +K++S+ EW DI KNQLP +LGGVGPM+S+VQL G+RDLFWLPIEQY+KDGR
Sbjct: 1777 LLGADKVVSYALNEWLTDIRKNQLPGILGGVGPMHSVVQLFHGVRDLFWLPIEQYRKDGR 1836
Query: 103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
I+RGLQRGA SF TSTA AALEL+ R+V AIQ++
Sbjct: 1837 IIRGLQRGAASFGTSTASAALELSNRLVQAIQAT 1870
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 3 VRHPVMTTSKATSNVLGGVKSQLVPDARKEAAHKWRTDE 41
V P + ++ATSN+LGG+++Q+ PDA KE A KWR DE
Sbjct: 1956 VVKPFIVATEATSNLLGGMRNQIRPDAHKEDALKWRADE 1994
>sp|Q6P4T0|ATG2A_MOUSE Autophagy-related protein 2 homolog A OS=Mus musculus GN=Atg2a PE=1
SV=2
Length = 1914
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 65/94 (69%), Positives = 78/94 (82%)
Query: 43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
LLG +K+L + EW QDI KNQLP LLGGVGPM+S+VQL QG RDL WLPIEQY+KDGR
Sbjct: 1694 LLGVDKVLCYALNEWLQDIRKNQLPGLLGGVGPMHSVVQLFQGFRDLLWLPIEQYRKDGR 1753
Query: 103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
++RGLQRGA SF +STA AALEL+ R+V AIQ++
Sbjct: 1754 LIRGLQRGAASFGSSTASAALELSNRLVQAIQAT 1787
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 31/39 (79%)
Query: 3 VRHPVMTTSKATSNVLGGVKSQLVPDARKEAAHKWRTDE 41
V P++ ++ATSNVLGG+++Q++PDA K+ A KWR +E
Sbjct: 1873 VVKPIIVATEATSNVLGGMRNQILPDAHKDHALKWRLEE 1911
>sp|Q2TAZ0|ATG2A_HUMAN Autophagy-related protein 2 homolog A OS=Homo sapiens GN=ATG2A PE=1
SV=3
Length = 1938
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/94 (69%), Positives = 78/94 (82%)
Query: 43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
LLG +K+L + EW QDI KNQLP LLGGVGPM+S+VQL QG RDL WLPIEQY+KDGR
Sbjct: 1718 LLGVDKVLGYALNEWLQDIRKNQLPGLLGGVGPMHSVVQLFQGFRDLLWLPIEQYRKDGR 1777
Query: 103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
++RGLQRGA SF +STA AALEL+ R+V AIQ++
Sbjct: 1778 LMRGLQRGAASFGSSTASAALELSNRLVQAIQAT 1811
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 31/38 (81%)
Query: 3 VRHPVMTTSKATSNVLGGVKSQLVPDARKEAAHKWRTD 40
V P++ ++ATS++LGG+++Q+VPDA K+ A KWR+D
Sbjct: 1897 VVKPLILATEATSSLLGGMRNQIVPDAHKDHALKWRSD 1934
>sp|P0CM30|ATG2_CRYNJ Autophagy-related protein 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=ATG2 PE=3 SV=1
Length = 1935
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 60/92 (65%)
Query: 43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
+ G +L + +Q W+ D+ NQL ++ GV P+ S+V + G+ DL LPIEQY+KDGR
Sbjct: 1699 ITGLERLGTTLQDLWTPDVKANQLADVISGVSPIRSMVNVGSGVADLILLPIEQYRKDGR 1758
Query: 103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQ 134
I +G+QRG NSF STA+ ++L AR+ Q
Sbjct: 1759 IAKGVQRGTNSFVKSTALEVMKLGARLATGTQ 1790
>sp|P0CM31|ATG2_CRYNB Autophagy-related protein 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=ATG2 PE=3 SV=1
Length = 1935
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 60/92 (65%)
Query: 43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
+ G +L + +Q W+ D+ NQL ++ GV P+ S+V + G+ DL LPIEQY+KDGR
Sbjct: 1699 ITGLERLGTTLQDLWTPDVKANQLADVISGVSPIRSMVNVGSGVADLILLPIEQYRKDGR 1758
Query: 103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQ 134
I +G+QRG NSF STA+ ++L AR+ Q
Sbjct: 1759 IAKGVQRGTNSFVKSTALEVMKLGARLATGTQ 1790
>sp|Q4PFE7|ATG2_USTMA Autophagy-related protein 2 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=ATG2 PE=3 SV=1
Length = 2081
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 58/90 (64%)
Query: 45 GFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIV 104
G+ +L + W+ D+ NQL L G+GP+ SLV + G+ DL LPIEQY KDGR++
Sbjct: 1833 GWARLFDTLNDIWTPDVKANQLADFLSGLGPIRSLVNVGAGLADLVLLPIEQYHKDGRVL 1892
Query: 105 RGLQRGANSFTTSTAMAALELTARIVMAIQ 134
RG+QRGA F +TA+ A++L AR+ Q
Sbjct: 1893 RGVQRGAAGFAKTTALEAVKLGARLATGTQ 1922
>sp|Q0CSI0|ATG2_ASPTN Autophagy-related protein 2 OS=Aspergillus terreus (strain NIH 2624 /
FGSC A1156) GN=atg2 PE=3 SV=1
Length = 2082
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 63/93 (67%)
Query: 43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
+ GF+KL + W DI +NQLPS+L G+ P+ SLV + G++DL +P+ +Y+KDGR
Sbjct: 1861 IAGFDKLGQTLNDIWMPDIKRNQLPSVLAGLAPIRSLVNVGGGVKDLVVVPMREYRKDGR 1920
Query: 103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQS 135
IVR +Q+GA SF +T+ ++L A++ + Q+
Sbjct: 1921 IVRSIQKGAWSFAKTTSNELVKLGAKLAIGTQT 1953
>sp|Q2GYD8|ATG2_CHAGB Autophagy-related protein 2 OS=Chaetomium globosum (strain ATCC 6205
/ CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=ATG2
PE=3 SV=1
Length = 2043
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 59/91 (64%)
Query: 45 GFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIV 104
GF++L + W+ D+ +NQLP +L G+ P+ SLV G RDL +PI +Y+KDGRIV
Sbjct: 1812 GFDRLGDQLNDIWTVDVKRNQLPGVLAGLAPVRSLVNAGSGFRDLIEIPIREYRKDGRIV 1871
Query: 105 RGLQRGANSFTTSTAMAALELTARIVMAIQS 135
R L++GA +F +T ++L A++ + Q+
Sbjct: 1872 RSLRKGATAFAKTTGTEVVKLGAKLAIGTQN 1902
>sp|Q5B1T9|ATG2_EMENI Autophagy-related protein 2 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=atg2 PE=3
SV=2
Length = 2090
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 60/91 (65%)
Query: 45 GFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIV 104
GF+KL + W DI NQLP +L G+ P+ SLV + G++DL +P+ +Y+KDGRIV
Sbjct: 1870 GFDKLGQALNDVWMPDIKNNQLPGVLAGLAPIRSLVNVGSGVKDLVAVPVREYRKDGRIV 1929
Query: 105 RGLQRGANSFTTSTAMAALELTARIVMAIQS 135
R +Q+GA +F +T+ ++L A++ + Q+
Sbjct: 1930 RSIQKGAFAFAKTTSNELVKLGAKLAIGTQT 1960
>sp|A2QSC9|ATG2_ASPNC Autophagy-related protein 2 OS=Aspergillus niger (strain CBS 513.88 /
FGSC A1513) GN=atg2 PE=3 SV=1
Length = 2221
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 61/91 (67%)
Query: 45 GFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIV 104
GF+KL + W DI +NQLP +L G+ P+ SLV + G++DL +P+ +Y+KDGR+V
Sbjct: 1919 GFDKLGQTLNDIWMPDIKRNQLPGVLAGLAPIRSLVNVGGGVKDLVAVPVREYRKDGRLV 1978
Query: 105 RGLQRGANSFTTSTAMAALELTARIVMAIQS 135
R +Q+GA SF +T+ ++L A++ + Q+
Sbjct: 1979 RSIQKGALSFAKTTSNELVKLGAKLAIGTQT 2009
>sp|A6S7C7|ATG2_BOTFB Autophagy-related protein 2 OS=Botryotinia fuckeliana (strain B05.10)
GN=atg2 PE=3 SV=1
Length = 2160
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 59/91 (64%)
Query: 45 GFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIV 104
GF+K+ + W+ D+ +NQLP +L G+ P+ S+V + G +DL +P+ +Y+KDGRIV
Sbjct: 1942 GFDKMGQVLNDIWTPDVKENQLPGILAGLAPVRSIVNVGSGFKDLVVIPMNEYKKDGRIV 2001
Query: 105 RGLQRGANSFTTSTAMAALELTARIVMAIQS 135
R + RGA F +T ++L A++ + +Q+
Sbjct: 2002 RNISRGAAIFAKTTGTELVKLGAKVAIGVQT 2032
>sp|Q4WLK5|ATG2_ASPFU Autophagy-related protein 2 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=atg2 PE=3
SV=1
Length = 2160
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 61/91 (67%)
Query: 45 GFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIV 104
GF+KL + W DI +NQLP +L G+ P+ SLV + G++DL +P+ +Y+KDGRIV
Sbjct: 1913 GFDKLGQTLNDIWMPDIKRNQLPGVLAGLAPIRSLVNVGGGVKDLVVVPMREYRKDGRIV 1972
Query: 105 RGLQRGANSFTTSTAMAALELTARIVMAIQS 135
R +Q+GA +F +T+ ++L A++ + Q+
Sbjct: 1973 RSIQKGALAFAKTTSNELVKLGAKLAIGTQT 2003
>sp|Q2ULE1|ATG2_ASPOR Autophagy-related protein 2 OS=Aspergillus oryzae (strain ATCC 42149
/ RIB 40) GN=atg2 PE=3 SV=1
Length = 2084
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 61/91 (67%)
Query: 45 GFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIV 104
GF+KL + W DI +NQLP +L G+ P+ SLV + G++DL +P+ +Y+KDGRIV
Sbjct: 1865 GFDKLGQTLNDIWMPDIKRNQLPGVLAGLAPIRSLVNVGGGVKDLVVVPMREYRKDGRIV 1924
Query: 105 RGLQRGANSFTTSTAMAALELTARIVMAIQS 135
R +Q+GA +F +T+ ++L A++ + Q+
Sbjct: 1925 RSIQKGALAFAKTTSNELVKLGAKLAIGTQT 1955
>sp|A7KAL3|ATG2_PENCW Autophagy-related protein 2 OS=Penicillium chrysogenum (strain ATCC
28089 / DSM 1075 / Wisconsin 54-1255) GN=atg2 PE=3 SV=1
Length = 2098
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 62/91 (68%)
Query: 45 GFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIV 104
GF+++ + W D+ +NQLPS+L G+ P+ SLV + G+RDL +P+ +Y+KDGRIV
Sbjct: 1881 GFDRMGQTLNDIWMPDVKQNQLPSVLAGLAPIRSLVNVGGGVRDLVVVPMREYRKDGRIV 1940
Query: 105 RGLQRGANSFTTSTAMAALELTARIVMAIQS 135
R +Q+GA +F +T+ ++L A++ + Q+
Sbjct: 1941 RSIQKGALAFAKTTSNELVKLGAKLAIGTQT 1971
>sp|A1DP40|ATG2_NEOFI Autophagy-related protein 2 OS=Neosartorya fischeri (strain ATCC 1020
/ DSM 3700 / FGSC A1164 / NRRL 181) GN=atg2 PE=3 SV=1
Length = 2137
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 61/91 (67%)
Query: 45 GFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIV 104
GF+KL + W DI +NQLP +L G+ P+ SLV + G++DL +P+ +Y+KDGR+V
Sbjct: 1918 GFDKLGQTLNDIWMPDIKRNQLPGVLAGLAPIRSLVNVGGGVKDLVVVPMREYRKDGRLV 1977
Query: 105 RGLQRGANSFTTSTAMAALELTARIVMAIQS 135
R +Q+GA +F +T+ ++L A++ + Q+
Sbjct: 1978 RSIQKGALAFAKTTSNELVKLGAKLAIGTQT 2008
>sp|A7E6F5|ATG2_SCLS1 Autophagy-related protein 2 OS=Sclerotinia sclerotiorum (strain ATCC
18683 / 1980 / Ss-1) GN=atg2 PE=3 SV=1
Length = 2159
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 58/91 (63%)
Query: 45 GFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIV 104
GF K+ + W DI +NQLP +L G+ P+ S+V + G +DL +P+ +Y+KDGRIV
Sbjct: 1941 GFEKMGKCLNDIWMPDIQRNQLPGILAGLAPVRSIVNVGGGFKDLVVIPMHEYKKDGRIV 2000
Query: 105 RGLQRGANSFTTSTAMAALELTARIVMAIQS 135
R + +GA +F +T ++L A++ + +Q+
Sbjct: 2001 RSISKGAAAFAKTTGTELVKLGAKVAIGVQT 2031
>sp|Q1E702|ATG2_COCIM Autophagy-related protein 2 OS=Coccidioides immitis (strain RS)
GN=ATG2 PE=3 SV=1
Length = 2100
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 58/92 (63%)
Query: 45 GFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIV 104
GF++L + W DI NQLP++L G+ P+ SLV + G++DL +P+ +Y+KDGRIV
Sbjct: 1872 GFDRLGRTLNDIWMPDIKANQLPTVLAGIAPVRSLVNIGGGVKDLVLVPMREYKKDGRIV 1931
Query: 105 RGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
R +Q+GA F +T L A++ + Q++
Sbjct: 1932 RSIQKGAVQFAKTTTNELLRFGAKLAIGTQTA 1963
>sp|A1CUF9|ATG2_ASPCL Autophagy-related protein 2 OS=Aspergillus clavatus (strain ATCC 1007
/ CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=atg2 PE=3
SV=1
Length = 2131
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 60/91 (65%)
Query: 45 GFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIV 104
GF+KL + W DI +NQLP +L G+ P+ SLV + G++DL +P+ +Y+ DGRIV
Sbjct: 1912 GFDKLGQTLNDIWMPDIKRNQLPGVLAGLAPIRSLVNVGGGVKDLVVIPMREYRMDGRIV 1971
Query: 105 RGLQRGANSFTTSTAMAALELTARIVMAIQS 135
R +Q+GA +F +T+ ++L A++ + Q+
Sbjct: 1972 RSIQKGALAFAKTTSNELVKLGAKLAIGTQT 2002
>sp|A6R6E3|ATG2_AJECN Autophagy-related protein 2 OS=Ajellomyces capsulata (strain NAm1 /
WU24) GN=ATG2 PE=3 SV=1
Length = 2105
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 57/91 (62%)
Query: 45 GFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIV 104
GF KL + W DI NQLP +L G+ P+ SLV + G +DL +P+ +Y+KDGRIV
Sbjct: 1881 GFEKLGVTLNDIWMPDIKANQLPGVLAGLAPIKSLVGVGSGFKDLVVIPMREYKKDGRIV 1940
Query: 105 RGLQRGANSFTTSTAMAALELTARIVMAIQS 135
R +Q+GA +F +T ++L A++ + Q+
Sbjct: 1941 RSIQKGALAFAKTTTNELVKLGAKLAIGTQT 1971
>sp|Q871L5|ATG2_NEUCR Autophagy-related protein 2 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=atg-2
PE=3 SV=2
Length = 2051
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 54/90 (60%)
Query: 45 GFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIV 104
GF+KL + W+ D+ QLP +L GV P+ SLV G +DL +PI +Y+KDGRI
Sbjct: 1813 GFDKLGKKLNDIWTADVKSTQLPGVLAGVAPVRSLVNAGSGFKDLIEIPIREYKKDGRIF 1872
Query: 105 RGLQRGANSFTTSTAMAALELTARIVMAIQ 134
R + +GA +F +T ++L A++ + Q
Sbjct: 1873 RSIGKGATAFAKTTGTEVVKLGAKLAIGTQ 1902
>sp|A7KAI1|ATG2_PICAN Autophagy-related protein 2 OS=Pichia angusta GN=ATG2 PE=3 SV=1
Length = 1765
Score = 76.6 bits (187), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 56/91 (61%)
Query: 45 GFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIV 104
GF +L + W DI +NQL +L G+ P+ S+V++ G ++L +P+++Y+KDGR++
Sbjct: 1442 GFARLHKMLNDLWMPDIKRNQLGGVLSGLAPVKSIVKIGSGFKELVAVPLKEYEKDGRVI 1501
Query: 105 RGLQRGANSFTTSTAMAALELTARIVMAIQS 135
RGLQ+GA SF T L+ ++ Q+
Sbjct: 1502 RGLQKGALSFAKITGGELLKFGVKLAAGTQT 1532
>sp|Q51ZN8|ATG2_MAGO7 Autophagy-related protein 2 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=ATG2 PE=3 SV=2
Length = 2094
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 57/92 (61%)
Query: 44 LGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRI 103
LGF + + W +I ++QLP +L G+ P+ SLV + G R L+ +PI +Y+++GR+
Sbjct: 1857 LGFERFGEMLNDVWMPEIKRHQLPGVLAGLAPVRSLVDVGSGFRHLYEIPIREYKRNGRV 1916
Query: 104 VRGLQRGANSFTTSTAMAALELTARIVMAIQS 135
VR + +GA +F +T ++L A++ + Q+
Sbjct: 1917 VRSIGKGAAAFARTTGTELIKLGAKVAIGTQN 1948
>sp|Q6C6M0|ATG2_YARLI Autophagy-related protein 2 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=ATG2 PE=3 SV=2
Length = 1525
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%)
Query: 43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
+ GF L + W D+ + QLP +L GV P+ LV L GIR+L +P+ +Y+KDGR
Sbjct: 1293 ITGFANLGQKLNDIWMPDVRRTQLPGVLAGVAPVRPLVNLGGGIRNLIVVPVREYKKDGR 1352
Query: 103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQS 135
+VR L +GA +F +T + A++ + Q+
Sbjct: 1353 VVRSLNQGAYAFAKTTTNELVRFGAKLAVGTQN 1385
>sp|Q6BTX0|ATG2_DEBHA Autophagy-related protein 2 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=ATG2 PE=3 SV=2
Length = 1887
Score = 73.2 bits (178), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 54/92 (58%)
Query: 43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
+LG L + + W+ +I + QL LL G+ P S+V + G +DL +PI++Y+KDGR
Sbjct: 1559 ILGMPMLGAELTKTWAPNIQQTQLSGLLAGLSPFRSIVNIGGGFKDLVAVPIKEYRKDGR 1618
Query: 103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQ 134
++R LQ+G + F +T L L A++ Q
Sbjct: 1619 LMRSLQKGTSKFAKTTGYELLNLGAKLASGTQ 1650
>sp|Q9HFR4|ATG2_PICPA Autophagy-related protein 2 OS=Komagataella pastoris GN=ATG2 PE=3
SV=1
Length = 1862
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 47 NKLLSFMQAEW-SQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIVR 105
N++ S + E+ + DI +NQL +L G+ + S+V+++ G +DL +P+E+Y++DGR++
Sbjct: 1552 NQVNSHTKREYGTPDITRNQLKGVLSGLASINSVVKISSGFKDLIAIPMEEYRRDGRLIT 1611
Query: 106 GLQRGANSFTTSTAMAALELTARIVMAIQS 135
G+++GA SF +T L+L ++V Q+
Sbjct: 1612 GVRKGAFSFAKTTGNELLKLGVKLVAGTQT 1641
>sp|A3LT28|ATG2_PICST Autophagy-related protein 2 OS=Scheffersomyces stipitis (strain ATCC
58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=ATG2
PE=3 SV=2
Length = 1848
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
LLG L + W I + Q+ +L G+ P+ S+V + G++DL +PI +Y+KDGR
Sbjct: 1522 LLGMPSLGKALGEVWGPQIQQTQIAGILAGLAPIRSIVNIGGGVKDLIAIPISEYKKDGR 1581
Query: 103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQ 134
+ R +Q+G F +T L L ++ Q
Sbjct: 1582 LFRSIQKGTQKFAKTTGYEILNLGVKLASGTQ 1613
>sp|Q75E74|ATG2_ASHGO Autophagy-related protein 2 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ATG2 PE=3 SV=3
Length = 1525
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 55/91 (60%)
Query: 45 GFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIV 104
G +L + + + W+ DI ++QL +L GV P+ S++ L G++ L +P+++Y++D R+
Sbjct: 1261 GLGELHNCLSSIWTPDITRSQLSGVLKGVTPLKSIITLGSGVKALVTVPLKEYRQDQRLT 1320
Query: 105 RGLQRGANSFTTSTAMAALELTARIVMAIQS 135
R LQ+GA F +T+ + L R+ Q+
Sbjct: 1321 RSLQKGARDFLKTTSGELIRLGVRMASGTQA 1351
>sp|Q6CQ43|ATG2_KLULA Autophagy-related protein 2 OS=Kluyveromyces lactis (strain ATCC 8585
/ CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=ATG2 PE=3 SV=1
Length = 1502
Score = 62.4 bits (150), Expect = 8e-10, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 47/91 (51%)
Query: 45 GFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIV 104
GF +L + + W+ DI K Q+P +L + P+ L L+ G R L +P E YQ++GR
Sbjct: 1240 GFPQLETILSDIWTPDITKTQIPGILSALTPLKPLAGLSYGARALISVPTEHYQQNGRFG 1299
Query: 105 RGLQRGANSFTTSTAMAALELTARIVMAIQS 135
LQ G F +T ++L R+ Q+
Sbjct: 1300 GSLQNGGMVFLKTTGGEVIKLAVRLTSGTQT 1330
>sp|P53855|ATG2_YEAST Autophagy-related protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ATG2 PE=1 SV=1
Length = 1592
Score = 62.4 bits (150), Expect = 8e-10, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 56/93 (60%)
Query: 43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
L GF++L + ++A W+ DI K QLP +L G+ P+ S + + G++ L + + +Y+++G
Sbjct: 1316 LNGFDELNNKLKAIWTPDITKKQLPGVLEGLAPVRSFMAIGSGVKTLVTVLMSEYRQEGH 1375
Query: 103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQS 135
+ R L++G N F +T ++L ++ Q+
Sbjct: 1376 LGRSLKKGGNVFLKTTTGDFVKLGVKLTSGTQA 1408
>sp|A6ZRK1|ATG2_YEAS7 Autophagy-related protein 2 OS=Saccharomyces cerevisiae (strain
YJM789) GN=ATG2 PE=3 SV=1
Length = 1592
Score = 62.4 bits (150), Expect = 8e-10, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 56/93 (60%)
Query: 43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
L GF++L + ++A W+ DI K QLP +L G+ P+ S + + G++ L + + +Y+++G
Sbjct: 1316 LNGFDELNNKLKAIWTPDITKKQLPGVLEGLAPVRSFMAIGSGVKTLVTVLMSEYRQEGH 1375
Query: 103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQS 135
+ R L++G N F +T ++L ++ Q+
Sbjct: 1376 LGRSLKKGGNVFLKTTTGDFVKLGVKLTSGTQA 1408
>sp|Q59X11|ATG2_CANAL Autophagy-related protein 2 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=ATG2 PE=3 SV=1
Length = 1856
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 57 WSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIVRGLQRGANSFTT 116
W Q+ ++ GV P+ S+V + G +DL +PI +Y+KDGR+ R +Q+G SF
Sbjct: 1528 WLPVFQSTQVIGIISGVSPLRSVVNIGGGFKDLVAIPISEYKKDGRLWRSIQKGTVSFAK 1587
Query: 117 STAMAALELTARIVMAIQ 134
+T L L ++ Q
Sbjct: 1588 TTGYEILNLGVKLASGTQ 1605
>sp|A7TM79|ATG2_VANPO Autophagy-related protein 2 OS=Vanderwaltozyma polyspora (strain ATCC
22028 / DSM 70294) GN=ATG2 PE=3 SV=1
Length = 1566
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 49/91 (53%)
Query: 45 GFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIV 104
GF L ++ W+ DI +QL ++GGV P+ S + + ++ L +PI Y++DG++
Sbjct: 1302 GFEDLSDSLKNVWTPDIISSQLGGIIGGVSPLKSAITIGTSVKKLVSVPITDYKQDGKLS 1361
Query: 105 RGLQRGANSFTTSTAMAALELTARIVMAIQS 135
R + + N F + + + L A++ Q+
Sbjct: 1362 RSIPKAVNIFLKTASGDFVRLGAKMASGTQA 1392
>sp|Q6FP05|ATG2_CANGA Autophagy-related protein 2 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ATG2 PE=3
SV=1
Length = 1587
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 47/91 (51%)
Query: 45 GFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIV 104
GFN+L + W D+ Q+ ++L G P+ S + L G + + + +Y++D I
Sbjct: 1324 GFNELSEQLVKIWGNDVTSKQIFNILQGFAPVKSFIALGAGAQTFITVLLAEYKRDRSIS 1383
Query: 105 RGLQRGANSFTTSTAMAALELTARIVMAIQS 135
R +++ N F +T ++L A++ + Q+
Sbjct: 1384 RSVKKSGNIFIKTTTGDFIKLGAKLAVGTQA 1414
>sp|O94649|ATG2_SCHPO Autophagy-related protein 2 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=atg2 PE=1 SV=4
Length = 1646
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Query: 43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
L G + L+ + W QDI NQL +L GV P+ ++ + +GI+D+F P+ Q +
Sbjct: 1434 LSGAEEFLNALLNVWLQDIRNNQLSKVLNGVVPIRTMFTVGRGIKDIFVSPVRGLQGN-H 1492
Query: 103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQSSQR 138
V + G FT L L A+ S R
Sbjct: 1493 SVGSFRHGIIKFTEKYVNDFLSLNAQGATGTHSLLR 1528
>sp|P0C6T5|R1A_BCHK5 Replicase polyprotein 1a OS=Bat coronavirus HKU5 GN=1a PE=3 SV=1
Length = 4481
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 46 FNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIVR 105
F+ L S+ + E +Q Y+ L S G P Q+ + ++ + Y+KD + R
Sbjct: 4025 FSHLASYAELEAAQSSYQKALNS--GDASP-----QVLKALQKAVNIAKNAYEKDKAVAR 4077
Query: 106 GLQRGANSFTTS--TAMAALELTARIVMAIQS 135
L+R A TS A + A+IV A+Q+
Sbjct: 4078 KLERMAEQAMTSMYKQARAEDKKAKIVSAMQT 4109
>sp|P0C6W4|R1AB_BCHK5 Replicase polyprotein 1ab OS=Bat coronavirus HKU5 GN=rep PE=3 SV=1
Length = 7182
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 46 FNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIVR 105
F+ L S+ + E +Q Y+ L S G P Q+ + ++ + Y+KD + R
Sbjct: 4025 FSHLASYAELEAAQSSYQKALNS--GDASP-----QVLKALQKAVNIAKNAYEKDKAVAR 4077
Query: 106 GLQRGANSFTTS--TAMAALELTARIVMAIQS 135
L+R A TS A + A+IV A+Q+
Sbjct: 4078 KLERMAEQAMTSMYKQARAEDKKAKIVSAMQT 4109
>sp|B7NF72|HDFR_ECOLU HTH-type transcriptional regulator HdfR OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=hdfR PE=3 SV=1
Length = 279
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 29 ARKEAAHKWRTDEFLLGFN-KLLSFMQAEWSQDIYKNQ 65
ARKE AH R +EF +G + L M +W +YKNQ
Sbjct: 78 ARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYKNQ 115
>sp|B7NU32|HDFR_ECO7I HTH-type transcriptional regulator HdfR OS=Escherichia coli O7:K1
(strain IAI39 / ExPEC) GN=hdfR PE=3 SV=1
Length = 279
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 29 ARKEAAHKWRTDEFLLGFN-KLLSFMQAEWSQDIYKNQ 65
ARKE AH R +EF +G + L M +W +YKNQ
Sbjct: 78 ARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYKNQ 115
>sp|O83092|RIR2_TREPA Ribonucleoside-diphosphate reductase subunit beta OS=Treponema
pallidum (strain Nichols) GN=nrdB PE=3 SV=1
Length = 351
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 11 SKATSNVLGGVKSQLVPDARKEAAHKWRTDEFLLGFNKLLSFMQAEWSQD 60
S++ S +L + S P+ R + ++W+ DE LL NK + + E+ D
Sbjct: 128 SQSYSYMLDTICS---PEERNDILYQWKDDEHLLARNKFIGNLYNEFQDD 174
>sp|Q07878|VPS13_YEAST Vacuolar protein sorting-associated protein 13 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS13 PE=1
SV=1
Length = 3144
Score = 29.3 bits (64), Expect = 7.0, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 59 QDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR--IVRGLQRGANSFTT 116
Q I KN +L S L G+ + P + QK+G ++GL +G T
Sbjct: 2925 QRINKNNRNALANSAQSFAS--TLGSGLSGIALDPYKAMQKEGAAGFLKGLGKGIVGLPT 2982
Query: 117 STAMAALELTARIVMAIQSS 136
TA+ L+LT+ + ++S+
Sbjct: 2983 KTAIGFLDLTSNLSQGVKST 3002
>sp|Q1R4H3|HDFR_ECOUT HTH-type transcriptional regulator HdfR OS=Escherichia coli (strain
UTI89 / UPEC) GN=hdfR PE=3 SV=1
Length = 279
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 29 ARKEAAHKWRTDEFLLGFN-KLLSFMQAEWSQDIYKNQ 65
ARKE AH R +EF +G + L M +W +Y+NQ
Sbjct: 78 ARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQ 115
>sp|P59369|HDFR_ECOL6 HTH-type transcriptional regulator HdfR OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=hdfR PE=3 SV=1
Length = 279
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 29 ARKEAAHKWRTDEFLLGFN-KLLSFMQAEWSQDIYKNQ 65
ARKE AH R +EF +G + L M +W +Y+NQ
Sbjct: 78 ARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQ 115
>sp|Q0TAV4|HDFR_ECOL5 HTH-type transcriptional regulator HdfR OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=hdfR PE=3 SV=1
Length = 279
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 29 ARKEAAHKWRTDEFLLGFN-KLLSFMQAEWSQDIYKNQ 65
ARKE AH R +EF +G + L M +W +Y+NQ
Sbjct: 78 ARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQ 115
>sp|B7N260|HDFR_ECO81 HTH-type transcriptional regulator HdfR OS=Escherichia coli O81
(strain ED1a) GN=hdfR PE=3 SV=1
Length = 279
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 29 ARKEAAHKWRTDEFLLGFN-KLLSFMQAEWSQDIYKNQ 65
ARKE AH R +EF +G + L M +W +Y+NQ
Sbjct: 78 ARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQ 115
>sp|B7MGH6|HDFR_ECO45 HTH-type transcriptional regulator HdfR OS=Escherichia coli O45:K1
(strain S88 / ExPEC) GN=hdfR PE=3 SV=1
Length = 279
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 29 ARKEAAHKWRTDEFLLGFN-KLLSFMQAEWSQDIYKNQ 65
ARKE AH R +EF +G + L M +W +Y+NQ
Sbjct: 78 ARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQ 115
>sp|Q329U3|HDFR_SHIDS HTH-type transcriptional regulator HdfR OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=hdfR PE=3 SV=1
Length = 279
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 29 ARKEAAHKWRTDEFLLGFN-KLLSFMQAEWSQDIYKNQ 65
ARKE AH R +EF +G + L M +W +Y+NQ
Sbjct: 78 ARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQ 115
>sp|B6I4A0|HDFR_ECOSE HTH-type transcriptional regulator HdfR OS=Escherichia coli (strain
SE11) GN=hdfR PE=3 SV=1
Length = 279
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 29 ARKEAAHKWRTDEFLLGFN-KLLSFMQAEWSQDIYKNQ 65
ARKE AH R +EF +G + L M +W +Y+NQ
Sbjct: 78 ARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQ 115
>sp|B7M5B2|HDFR_ECO8A HTH-type transcriptional regulator HdfR OS=Escherichia coli O8
(strain IAI1) GN=hdfR PE=3 SV=1
Length = 279
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 29 ARKEAAHKWRTDEFLLGFN-KLLSFMQAEWSQDIYKNQ 65
ARKE AH R +EF +G + L M +W +Y+NQ
Sbjct: 78 ARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQ 115
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.132 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,193,937
Number of Sequences: 539616
Number of extensions: 1663114
Number of successful extensions: 4104
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 4059
Number of HSP's gapped (non-prelim): 77
length of query: 142
length of database: 191,569,459
effective HSP length: 105
effective length of query: 37
effective length of database: 134,909,779
effective search space: 4991661823
effective search space used: 4991661823
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)