Query psy8812
Match_columns 142
No_of_seqs 110 out of 157
Neff 4.9
Searched_HMMs 13730
Date Fri Aug 16 19:54:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8812.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/8812hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1g4us1 a.24.11.1 (S:167-296) 33.6 9.5 0.00069 26.5 2.0 46 43-89 10-55 (130)
2 d2vlqa1 a.28.2.1 (A:4-84) ImmE 32.1 5.6 0.00041 25.6 0.5 21 26-46 60-80 (81)
3 d1gxha_ a.28.2.1 (A:) ImmE8 (I 32.1 6.8 0.0005 25.4 0.9 22 26-47 62-83 (85)
4 d1ayia_ a.28.2.1 (A:) ImmE7 pr 29.2 6.7 0.00049 25.5 0.5 21 27-47 65-85 (86)
5 d1jb9a2 c.25.1.1 (A:163-316) F 27.9 6.9 0.0005 25.5 0.4 11 71-81 13-23 (154)
6 d2hpua1 d.357.1.1 (A:35-160) N 27.1 10 0.00075 25.7 1.2 37 6-42 56-97 (126)
7 d1fnda2 c.25.1.1 (A:155-314) F 25.8 7.9 0.00058 25.2 0.4 11 71-81 18-28 (160)
8 d1f20a2 c.25.1.4 (A:1233-1397) 25.0 8.4 0.00061 25.7 0.4 11 71-81 19-29 (165)
9 d1ja1a3 c.25.1.4 (A:519-678) N 24.6 8.6 0.00063 26.2 0.4 11 71-81 17-27 (160)
10 d1ddga2 c.25.1.4 (A:447-599) S 22.5 10 0.00073 24.6 0.4 11 71-81 16-26 (153)
11 d1fdra2 c.25.1.1 (A:101-248) F 20.3 12 0.00087 24.1 0.4 11 71-81 16-26 (148)
No 1
>d1g4us1 a.24.11.1 (S:167-296) SptP tyrosine phosphatase {Salmonella typhimurium [TaxId: 90371]}
Probab=33.63 E-value=9.5 Score=26.49 Aligned_cols=46 Identities=22% Similarity=0.406 Sum_probs=34.7
Q ss_pred ccCHHHHHHHHHHHhhHHhhhcchhhhhcCCCchHHHHHHhhhHHHH
Q psy8812 43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDL 89 (142)
Q Consensus 43 i~G~~~l~~~l~~~W~~dI~~~Ql~~vl~Gv~Pirslv~ig~G~~dL 89 (142)
+.|+++-...+.+.=.+...+| -+.+-+|=+|+||+++=-+|++|.
T Consensus 10 l~GL~ka~~~L~~~~~e~L~kn-h~~lAsGnG~LRsl~T~L~gi~~~ 55 (130)
T d1g4us1 10 LKGLKRTLPQLEQMDGNSLREN-FQEMASGNGPLRSLMTNLQNLNKI 55 (130)
T ss_dssp HHHHHHHHHHHHTCCHHHHHTT-HHHHTSTTCHHHHHHHHHHGGGGC
T ss_pred HHhHHHHHHHHHhcCHHHHhhh-hHHHhcCCchHHHHHHHHHhhhcc
Confidence 3466666666666555665554 788999999999999988888875
No 2
>d2vlqa1 a.28.2.1 (A:4-84) ImmE9 protein (Im9) {Escherichia coli [TaxId: 562]}
Probab=32.14 E-value=5.6 Score=25.61 Aligned_cols=21 Identities=24% Similarity=0.501 Sum_probs=17.7
Q ss_pred ccChHHHhhhhhhhhccccCH
Q psy8812 26 VPDARKEAAHKWRTDEFLLGF 46 (142)
Q Consensus 26 vPd~~~ea~~K~r~l~Gi~G~ 46 (142)
-|...++..++||...|.+||
T Consensus 60 sPegIv~~IK~WRa~nG~PgF 80 (81)
T d2vlqa1 60 SPSGIVNTVKQWRAANGKSGF 80 (81)
T ss_dssp SHHHHHHHHHHHHHHTTCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCC
Confidence 355668888999999999997
No 3
>d1gxha_ a.28.2.1 (A:) ImmE8 (Im8) {Escherichia coli [TaxId: 562]}
Probab=32.11 E-value=6.8 Score=25.39 Aligned_cols=22 Identities=27% Similarity=0.530 Sum_probs=18.6
Q ss_pred ccChHHHhhhhhhhhccccCHH
Q psy8812 26 VPDARKEAAHKWRTDEFLLGFN 47 (142)
Q Consensus 26 vPd~~~ea~~K~r~l~Gi~G~~ 47 (142)
-|...++..++||...|.+||-
T Consensus 62 sPegIv~~IKeWRa~nG~PgFK 83 (85)
T d1gxha_ 62 SPEAVIKEIKEWRAANGKSGFK 83 (85)
T ss_dssp CTHHHHHHHHHHHHHTTCCCSC
T ss_pred CHHHHHHHHHHHHHHcCCcccc
Confidence 3666788899999999999984
No 4
>d1ayia_ a.28.2.1 (A:) ImmE7 protein (Im7) {Escherichia coli [TaxId: 562]}
Probab=29.25 E-value=6.7 Score=25.49 Aligned_cols=21 Identities=24% Similarity=0.537 Sum_probs=17.5
Q ss_pred cChHHHhhhhhhhhccccCHH
Q psy8812 27 PDARKEAAHKWRTDEFLLGFN 47 (142)
Q Consensus 27 Pd~~~ea~~K~r~l~Gi~G~~ 47 (142)
|...+...++||...|.+||-
T Consensus 65 PegI~k~IKeWRa~nG~PgFK 85 (86)
T d1ayia_ 65 PEGIVKEIKEWRAANGKPGFK 85 (86)
T ss_dssp HHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHHHHHcCCCccC
Confidence 555677889999999999983
No 5
>d1jb9a2 c.25.1.1 (A:163-316) Ferredoxin reductase (flavodoxin reductase) {Maize (Zea mays), root isoform [TaxId: 4577]}
Probab=27.90 E-value=6.9 Score=25.46 Aligned_cols=11 Identities=27% Similarity=0.622 Sum_probs=9.3
Q ss_pred cCCCchHHHHH
Q psy8812 71 GGVGPMYSLVQ 81 (142)
Q Consensus 71 ~Gv~Pirslv~ 81 (142)
+||+|++|+.+
T Consensus 13 tGIaP~~s~l~ 23 (154)
T d1jb9a2 13 TGVAPFRGYLR 23 (154)
T ss_dssp GGGHHHHHHHH
T ss_pred eeHHHHHHHHH
Confidence 48999999975
No 6
>d2hpua1 d.357.1.1 (A:35-160) NosL {Achromobacter cycloclastes [TaxId: 223]}
Probab=27.13 E-value=10 Score=25.74 Aligned_cols=37 Identities=24% Similarity=0.267 Sum_probs=31.9
Q ss_pred cceeccccc----ccccccccc-ccccChHHHhhhhhhhhcc
Q psy8812 6 PVMTTSKAT----SNVLGGVKS-QLVPDARKEAAHKWRTDEF 42 (142)
Q Consensus 6 ~~~~~~~~~----~n~l~g~r~-~lvPd~~~ea~~K~r~l~G 42 (142)
..|.+.+|+ +++-+.|.. +++|++..+.++++...+|
T Consensus 56 ~~i~A~~A~yV~gs~~~gpMg~~~l~~F~~~~dA~~F~~~~G 97 (126)
T d2hpua1 56 NWIAADKAFYVVGSARRGGMGAPEAVPFSSRDEAAAFVLAEG 97 (126)
T ss_dssp EEECGGGSEEEEESSSSCSSSCCCEEEESCHHHHHHHHHHTE
T ss_pred ccEECCeeEEEECCCCCcCCCCccccCcCCHHHHHHHHHHhC
Confidence 468889988 688888885 8999999999999998886
No 7
>d1fnda2 c.25.1.1 (A:155-314) Ferredoxin reductase (flavodoxin reductase) {Spinach (Spinacia oleracea) [TaxId: 3562]}
Probab=25.85 E-value=7.9 Score=25.24 Aligned_cols=11 Identities=27% Similarity=0.600 Sum_probs=9.3
Q ss_pred cCCCchHHHHH
Q psy8812 71 GGVGPMYSLVQ 81 (142)
Q Consensus 71 ~Gv~Pirslv~ 81 (142)
+|++|++|+.+
T Consensus 18 tGIaP~~s~l~ 28 (160)
T d1fnda2 18 TGIAPFRSFLW 28 (160)
T ss_dssp GGGHHHHHHHH
T ss_pred hhHHHHHHHHH
Confidence 48999999975
No 8
>d1f20a2 c.25.1.4 (A:1233-1397) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=24.97 E-value=8.4 Score=25.65 Aligned_cols=11 Identities=36% Similarity=0.631 Sum_probs=9.5
Q ss_pred cCCCchHHHHH
Q psy8812 71 GGVGPMYSLVQ 81 (142)
Q Consensus 71 ~Gv~Pirslv~ 81 (142)
+|++|++|+.+
T Consensus 19 tGIaP~~s~L~ 29 (165)
T d1f20a2 19 TGIAPFRSFWQ 29 (165)
T ss_dssp GGGHHHHHHHH
T ss_pred hhHHHHHHHHH
Confidence 48999999985
No 9
>d1ja1a3 c.25.1.4 (A:519-678) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=24.59 E-value=8.6 Score=26.24 Aligned_cols=11 Identities=27% Similarity=0.797 Sum_probs=9.7
Q ss_pred cCCCchHHHHH
Q psy8812 71 GGVGPMYSLVQ 81 (142)
Q Consensus 71 ~Gv~Pirslv~ 81 (142)
+|++|++|+++
T Consensus 17 TGIAPf~s~l~ 27 (160)
T d1ja1a3 17 TGIAPFMGFIQ 27 (160)
T ss_dssp GGGHHHHHHHH
T ss_pred HhHHHHHHHHH
Confidence 49999999986
No 10
>d1ddga2 c.25.1.4 (A:447-599) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]}
Probab=22.52 E-value=10 Score=24.63 Aligned_cols=11 Identities=27% Similarity=0.724 Sum_probs=9.2
Q ss_pred cCCCchHHHHH
Q psy8812 71 GGVGPMYSLVQ 81 (142)
Q Consensus 71 ~Gv~Pirslv~ 81 (142)
+||+|++|+.+
T Consensus 16 tGIaP~~s~l~ 26 (153)
T d1ddga2 16 TGIAPFRAFMQ 26 (153)
T ss_dssp GGGHHHHHHHH
T ss_pred hhHHHHHHHHH
Confidence 48999999974
No 11
>d1fdra2 c.25.1.1 (A:101-248) Ferredoxin reductase (flavodoxin reductase) {Escherichia coli [TaxId: 562]}
Probab=20.31 E-value=12 Score=24.10 Aligned_cols=11 Identities=27% Similarity=0.751 Sum_probs=9.4
Q ss_pred cCCCchHHHHH
Q psy8812 71 GGVGPMYSLVQ 81 (142)
Q Consensus 71 ~Gv~Pirslv~ 81 (142)
+|++|++|+.+
T Consensus 16 tGiaP~~s~l~ 26 (148)
T d1fdra2 16 TAIGPYLSILR 26 (148)
T ss_dssp GGGHHHHHHHH
T ss_pred eEHHHHHHHHH
Confidence 48999999975
Done!