BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy882
(253 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|321479079|gb|EFX90035.1| hypothetical protein DAPPUDRAFT_300090 [Daphnia pulex]
Length = 591
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 68/87 (78%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SRLFI+CGK VTEDD R+ F +G I+EI VKDR TGE KGVAYI+FSKTSEAA
Sbjct: 23 DEPPNSRLFIVCGKSVTEDDFREAFHKYGTIEEIWMVKDRTTGEPKGVAYIKFSKTSEAA 82
Query: 78 KAVEEMNGEFLPNHSKPIKVLIAAKLE 104
A+EEMNG + H +P+KVLIA E
Sbjct: 83 TAMEEMNGRCIGCHPRPLKVLIAHSRE 109
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
R+ N+E RLF++ K + + +LR F+ FG+I + VKD+NT ESKG AY+++ +
Sbjct: 114 RDSNEEERLLRLFVVVPKSMNDSELRDHFAQFGDIDYVSIVKDKNTKESKGFAYVKYHRV 173
Query: 74 SEAAKAVEEMNGEFLPNHSKP 94
S AKA E F P + P
Sbjct: 174 SHTAKAFECCERSFKPVFADP 194
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 102 KLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPGIPMVVVPDFSYGLPRNGASA 160
K E K +G + + Y + Q+A+YA++K HGF YPPG ++V D+ P S+
Sbjct: 266 KRETKNRQQGRCQYTAVYNNAQAASYAKEKLHGFEYPPGQRLIVKFDYISSEPTRSTSS 324
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 221 TLHGAEMYGSRLKVMEADPPKGDRN---RKRQRLDD 253
TLHG E+ GSRLKVM A+PP N RKR R+++
Sbjct: 555 TLHGQEVCGSRLKVMTAEPPNATNNDTLRKRIRIEE 590
>gi|307170204|gb|EFN62590.1| RNA-binding protein 45 [Camponotus floridanus]
Length = 485
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 71/88 (80%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
R ND+PP+SRLF++C K + EDDLR+ F FG I++I VKDRNTGE+KGV YI+FSKT
Sbjct: 17 RSKNDDPPNSRLFVICHKSLEEDDLRKAFEKFGKIEDIWVVKDRNTGENKGVTYIKFSKT 76
Query: 74 SEAAKAVEEMNGEFLPNHSKPIKVLIAA 101
SEAA A+EEMNG+ L + +PIKV+IA+
Sbjct: 77 SEAAFALEEMNGKMLGSVGRPIKVMIAS 104
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 89/198 (44%), Gaps = 57/198 (28%)
Query: 112 GQKISVQYTSPQSAAYARDKFHGFAYPPGIPMVVVPDFSYGLPRNGASALGGNAALSVVD 171
GQ + V Y + +AAYAR+KFHGF YPPG M+V PD + P++ G SV +
Sbjct: 286 GQAVVV-YNNSSAAAYAREKFHGFEYPPGHRMIVKPDLTSAPPKSATKPGGSTTVGSVAN 344
Query: 172 SKGALQSLTKALAQATSLLRSAGL-------------------STDSRFISRL------- 205
++ L L + +AQATSL+++AGL S D+ R
Sbjct: 345 ARTDLAHLAETIAQATSLIQAAGLTAPSLDHISVKLPPAQPMASIDAEVAKRCFIVCGPP 404
Query: 206 ------------RLDDFI-YYILV----------------EFSQTLHGAEMYGSRLKVME 236
R + I Y+L E + LHG E+ GSRLKV+E
Sbjct: 405 VPPIYAMKDAFCRFGNLIDVYMLPGKNCGYAKYASVDSANEAIEVLHGQEICGSRLKVLE 464
Query: 237 ADPPK-GDRNRKRQRLDD 253
A+ G+ RKR R+D+
Sbjct: 465 AEERNVGEDRRKRLRMDE 482
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
RE N+E RLF + K +T+ +L+Q FS FG I+ VKDR+T ESKG Y++F K
Sbjct: 112 RETNEEERWVRLFCVLPKTMTDSELQQEFSKFGAIEYATVVKDRSTNESKGFGYVKFKKV 171
Query: 74 SEAAKAVEEMNGEFLPNHSKPIK 96
S AA+A EE + ++ ++P K
Sbjct: 172 SSAARAFEECDRKYKAVFAEPKK 194
>gi|307202022|gb|EFN81586.1| RNA-binding protein 45 [Harpegnathos saltator]
Length = 484
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 71/88 (80%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
R ND+PP+SRLF++C K + EDDLR+ F FG I++I VKDRNTGE+KGV YI+FSKT
Sbjct: 17 RSKNDDPPNSRLFVICHKSLEEDDLRKAFEKFGKIEDIWVVKDRNTGENKGVTYIKFSKT 76
Query: 74 SEAAKAVEEMNGEFLPNHSKPIKVLIAA 101
SEAA A+EEMNG+ L + +PIKV+IA+
Sbjct: 77 SEAAFALEEMNGKMLGSVGRPIKVMIAS 104
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 115/260 (44%), Gaps = 75/260 (28%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
RE N+E RLF + K +++ +L+Q FS FG+I+ VKDR+T ESKG Y++F K
Sbjct: 112 RETNEEERWVRLFCVLPKTMSDSELQQEFSKFGSIEYATVVKDRSTNESKGFGYVKFKKV 171
Query: 74 SEAAKAVEEMNGEFL-----PNHSKP-------------------------------IKV 97
S AA+A EE + ++ P KP I +
Sbjct: 172 SSAARAFEECDRKYKAVFAEPKKPKPDHGDAKYNNGLSTSYDGSTSTYPSSNFGKSSISL 231
Query: 98 LIAAKLEFKEGYRGGQ---------------------------KISVQYTSPQ------- 123
IA EGY Q K V+Y P+
Sbjct: 232 EIATNYPNSEGYTRLQVIAHPALNQDQLWKLFDIVPGMDYCHLKTDVRYRMPRGQAIVVY 291
Query: 124 ----SAAYARDKFHGFAYPPGIPMVVVPDFSYGLPRNGASALGGNAALSVVDSKGALQSL 179
+AAYAR+KFHGF YPPG M+V PD + P++ S G + S ++ L L
Sbjct: 292 NNPSAAAYAREKFHGFEYPPGHRMIVKPDLTSAPPKS-TSKPGSSTTGSAASARTDLAHL 350
Query: 180 TKALAQATSLLRSAGLSTDS 199
+ +AQATSL+++AGL+ S
Sbjct: 351 AETIAQATSLIQAAGLTAPS 370
>gi|332029594|gb|EGI69483.1| RNA-binding protein 45 [Acromyrmex echinatior]
Length = 484
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 77/100 (77%), Gaps = 2/100 (2%)
Query: 2 DRNYRINTHDRSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGE 61
+R+Y T RS+ ND+PP+SRLF++C K + EDDLR+ F FG I++I VKDRNTG+
Sbjct: 6 ERDYYTQTDLRSK--NDDPPNSRLFVICHKSLEEDDLRKAFEKFGKIEDIWVVKDRNTGD 63
Query: 62 SKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIAA 101
+KGV YI+FSKTSEAA A+EEMNG+ L + + IKV+IA+
Sbjct: 64 NKGVTYIKFSKTSEAAFALEEMNGKMLGSVGRAIKVMIAS 103
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 116/262 (44%), Gaps = 77/262 (29%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
RE N+E RLF + K +T+ +L+Q FS FG I+ VKDR+T ESKG Y++F K
Sbjct: 111 RETNEEERWVRLFCVLPKTMTDSELQQEFSKFGAIEYATVVKDRSTNESKGFGYVKFKKV 170
Query: 74 SEAAKAVEEMNGEFL-----PNHSKP---------------------------------I 95
S AA+A EE + ++ P KP I
Sbjct: 171 SSAARAFEECDRKYKAVFAEPKKPKPDHNEAKYNNGLSGTTYDSSSSCSYGSSNFGKSSI 230
Query: 96 KVLIAAKLEFKEGYRGGQKIS---------------------------VQYTSPQSAA-- 126
+ IA EGY Q I+ V+Y P+ A
Sbjct: 231 SLEIATNYSNSEGYTRLQVIAHPALNQDQLWKLFDIVPGLDYCHLKTDVRYRMPRGQAVV 290
Query: 127 ---------YARDKFHGFAYPPGIPMVVVPDFSYGLPRNGASALGGNAALSVVDSKGALQ 177
YAR+KFHGF YPPG M+V PD + P++ AS GG+ SV ++ L
Sbjct: 291 VYNNPSAAAYAREKFHGFEYPPGHRMIVKPDLTSAPPKS-ASKPGGSTTGSVASARTDLV 349
Query: 178 SLTKALAQATSLLRSAGLSTDS 199
L + +AQATSL+++AGL+ S
Sbjct: 350 HLAETIAQATSLIQAAGLTAPS 371
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 93/198 (46%), Gaps = 58/198 (29%)
Query: 112 GQKISVQYTSPQSAAYARDKFHGFAYPPGIPMVVVPDFSYGLPRNGASALGGNAALSVVD 171
GQ + V Y +P +AAYAR+KFHGF YPPG M+V PD + P++ AS GG+ SV
Sbjct: 286 GQAVVV-YNNPSAAAYAREKFHGFEYPPGHRMIVKPDLTSAPPKS-ASKPGGSTTGSVAS 343
Query: 172 SKGALQSLTKALAQATSLLRSAGL-------------------STDSRFISRL------- 205
++ L L + +AQATSL+++AGL S D+ R
Sbjct: 344 ARTDLVHLAETIAQATSLIQAAGLTAPSLDHISIKLPPVQPMASIDAEVAKRCFIVCGPP 403
Query: 206 ------------RLDDFI-YYILV----------------EFSQTLHGAEMYGSRLKVME 236
R + I Y+L E + LHG E+ GSRLKV+E
Sbjct: 404 VPPIYAMKDAFCRFGNLIDVYMLPGKNCGYAKYASISSANEAIEVLHGQEICGSRLKVLE 463
Query: 237 ADPPK-GDRNRKRQRLDD 253
A+ G+ RKR R+D+
Sbjct: 464 AEERNVGEDRRKRLRMDE 481
>gi|157126908|ref|XP_001661004.1| developmentally regulated RNA-binding protein [Aedes aegypti]
gi|108873104|gb|EAT37329.1| AAEL010665-PA [Aedes aegypti]
Length = 387
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 73/94 (77%)
Query: 8 NTHDRSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY 67
N + + D PP SRLFI+C K VTED LR+ F FG I+EI VKDR +G++KGVAY
Sbjct: 12 NNFNEEKSPADIPPMSRLFIICSKTVTEDILREHFEKFGEIEEIWIVKDRQSGDAKGVAY 71
Query: 68 IRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIAA 101
I+FSKTSEAA+A+EEMNG+ + ++S+PIKVL+AA
Sbjct: 72 IKFSKTSEAARALEEMNGKTIGDNSRPIKVLVAA 105
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 53/83 (63%)
Query: 12 RSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
R + N+E + RLF+L K++TE+ LR+ F +G I I ++D+ T E KG AY++FS
Sbjct: 112 RKQTDNEEEKYLRLFVLIPKEMTEESLREEFGQYGTIDNITIIRDKVTKEGKGFAYVKFS 171
Query: 72 KTSEAAKAVEEMNGEFLPNHSKP 94
+ + AA+A EE + ++ ++P
Sbjct: 172 RFTHAARAFEECDAKYKAVFAEP 194
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 116 SVQYTSPQSAAYARDKFHGFAYPPGIPMVV 145
+V Y + QSA YARDK HG YPPG +++
Sbjct: 322 TVVYNNAQSAMYARDKIHGLEYPPGERLII 351
>gi|383850196|ref|XP_003700683.1| PREDICTED: RNA-binding protein 45-like [Megachile rotundata]
Length = 483
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 71/88 (80%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
R ND+PP+SRLF++C K + EDDLR+ F FG I++I VKDR+TGE+KGV YI+FSKT
Sbjct: 17 RSKNDDPPNSRLFVICHKSLEEDDLRKAFEKFGKIEDIWVVKDRSTGENKGVTYIKFSKT 76
Query: 74 SEAAKAVEEMNGEFLPNHSKPIKVLIAA 101
SEAA A+EEMNG+ L + +PIKV+IA+
Sbjct: 77 SEAAFALEEMNGKMLGSVGRPIKVMIAS 104
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 117/260 (45%), Gaps = 76/260 (29%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
RE N+E RLF + K +T+++L+Q FS FG I+ VKDRNT ESKG Y++F K
Sbjct: 112 RETNEEERWVRLFCVLPKSMTDNELQQEFSKFGPIEYATVVKDRNTNESKGFGYVKFKKV 171
Query: 74 SEAAKAVEEMNGEFL-----PNHSKP-------------------------------IKV 97
S AA+A EE + ++ P KP I +
Sbjct: 172 SSAARAFEECDRKYKAVFAEPKKPKPEHIDVKYNNGLSSHYDGTSGGYSSSNFGKSSISL 231
Query: 98 LIAAKLEFKEGYRGGQKIS---------------------------VQYTSPQ------- 123
IA EGY Q I+ V+Y P+
Sbjct: 232 EIATNYPNSEGYTHLQVIAHPALNQDQLWKLFDIVPGLDYCHLKNDVRYRMPRGQAVVVY 291
Query: 124 ----SAAYARDKFHGFAYPPGIPMVVVPDFSYGLPRNGASALGGNAALSVVDSKGALQSL 179
+AAYAR+KFHGF YPPG M+V PD S P+N A G++ + ++ L L
Sbjct: 292 SNPSAAAYAREKFHGFEYPPGHRMIVKPDLSNVPPKNAIKA--GSSTGGIASARTDLAHL 349
Query: 180 TKALAQATSLLRSAGLSTDS 199
+ +AQATSL+++AGL+ S
Sbjct: 350 AETIAQATSLIQAAGLTAPS 369
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 87/199 (43%), Gaps = 60/199 (30%)
Query: 112 GQKISVQYTSPQSAAYARDKFHGFAYPPGIPMVVVPDFSYGLPRNGASALGGNAALSVVD 171
GQ + V Y++P +AAYAR+KFHGF YPPG M+V PD S P+N A G++ +
Sbjct: 285 GQAVVV-YSNPSAAAYAREKFHGFEYPPGHRMIVKPDLSNVPPKNAIKA--GSSTGGIAS 341
Query: 172 SKGALQSLTKALAQ-----------ATSLLRSAGL---------STDSRFISRL------ 205
++ L L + +AQ A SL S + S D+ R
Sbjct: 342 ARTDLAHLAETIAQATSLIQAAGLTAPSLEHSMCVKLPPVQPMASIDAEVAKRCFIVCGP 401
Query: 206 -------------RLDDFI-YYILV----------------EFSQTLHGAEMYGSRLKVM 235
R + I Y+L E + LHG E+ GSRLKV+
Sbjct: 402 PVPPIYAMKDAFCRFGNLIDVYMLPGKNCGYAKYASVESANEAIEVLHGQEICGSRLKVL 461
Query: 236 EADPPK-GDRNRKRQRLDD 253
EA+ G+ RKR R+D+
Sbjct: 462 EAEERNVGEDRRKRLRMDE 480
>gi|340723140|ref|XP_003399954.1| PREDICTED: RNA-binding protein 45-like isoform 1 [Bombus
terrestris]
gi|340723142|ref|XP_003399955.1| PREDICTED: RNA-binding protein 45-like isoform 2 [Bombus
terrestris]
Length = 483
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
R ND+PP+SRLF++C K + EDDLR+ F FG I++I VKDR TGE+KGV YI+FSKT
Sbjct: 17 RSKNDDPPNSRLFVICHKSLEEDDLRKAFEKFGKIEDIWVVKDRTTGENKGVTYIKFSKT 76
Query: 74 SEAAKAVEEMNGEFLPNHSKPIKVLIAA 101
SEAA A+EEMNG+ L + +PIKV+IA+
Sbjct: 77 SEAAFALEEMNGKMLGSVGRPIKVMIAS 104
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 116/260 (44%), Gaps = 76/260 (29%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
RE N+E RLF + K +T+ +L + FS FG+I+ VKDRNT ESKG Y++F K
Sbjct: 112 RETNEEERWVRLFCVLPKSMTDGELHREFSKFGSIEYATVVKDRNTNESKGFGYVKFQKV 171
Query: 74 SEAAKAVEEMNGEFL-----PNHSKP-------------------------------IKV 97
S AAKA EE + ++ P KP I +
Sbjct: 172 SSAAKAFEECDRKYKAVFAEPKKPKPEHIDVKYNNGISSHYDSAGGGYSSSNFGKSSISL 231
Query: 98 LIAAKLEFKEGYRGGQKIS---------------------------VQYTSPQ------- 123
IA EGY Q I+ V+Y P+
Sbjct: 232 EIATNYPNSEGYTHLQVIAHPALNQDQLWKLFDIVPGLDYCHLKNDVRYRMPRGQAVVVY 291
Query: 124 ----SAAYARDKFHGFAYPPGIPMVVVPDFSYGLPRNGASALGGNAALSVVDSKGALQSL 179
+AAYAR+KFHGF YPPG M+V PD S P+N G++A + ++ L L
Sbjct: 292 SNPSAAAYAREKFHGFEYPPGHRMIVKPDLSSAPPKNAIKP--GSSAAGIASARTDLAHL 349
Query: 180 TKALAQATSLLRSAGLSTDS 199
+ +AQATSL+++AGL+ S
Sbjct: 350 AETIAQATSLIQAAGLTAPS 369
>gi|350425343|ref|XP_003494091.1| PREDICTED: RNA-binding protein 45-like isoform 1 [Bombus impatiens]
gi|350425346|ref|XP_003494092.1| PREDICTED: RNA-binding protein 45-like isoform 2 [Bombus impatiens]
Length = 483
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
R ND+PP+SRLF++C K + EDDLR+ F FG I++I VKDR TGE+KGV YI+FSKT
Sbjct: 17 RSKNDDPPNSRLFVICHKSLEEDDLRKAFEKFGKIEDIWVVKDRTTGENKGVTYIKFSKT 76
Query: 74 SEAAKAVEEMNGEFLPNHSKPIKVLIAA 101
SEAA A+EEMNG+ L + +PIKV+IA+
Sbjct: 77 SEAAFALEEMNGKMLGSVGRPIKVMIAS 104
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 116/260 (44%), Gaps = 76/260 (29%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
RE N+E RLF + K +T+ +L + FS FG+I+ VKDRNT ESKG Y++F K
Sbjct: 112 RETNEEERWVRLFCVLPKSMTDGELHREFSKFGSIEYATVVKDRNTNESKGFGYVKFQKV 171
Query: 74 SEAAKAVEEMNGEFL-----PNHSKP-------------------------------IKV 97
S AAKA EE + ++ P KP I +
Sbjct: 172 SSAAKAFEECDRKYKAVFAEPKKPKPEHIDVKYNNGLSSHYDSAGGGYSSSNFGKSSISL 231
Query: 98 LIAAKLEFKEGYRGGQKIS---------------------------VQYTSPQ------- 123
IA EGY Q I+ V+Y P+
Sbjct: 232 EIATNYPNSEGYTHLQVIAHPALNQDQLWKLFDIVPGLDYCHLKNDVRYRMPRGQAVVVY 291
Query: 124 ----SAAYARDKFHGFAYPPGIPMVVVPDFSYGLPRNGASALGGNAALSVVDSKGALQSL 179
+AAYAR+KFHGF YPPG M+V PD S P+N G++A + ++ L L
Sbjct: 292 SNPSAAAYAREKFHGFEYPPGHRMIVKPDLSSAPPKNAIKP--GSSAAGIASARTDLAHL 349
Query: 180 TKALAQATSLLRSAGLSTDS 199
+ +AQATSL+++AGL+ S
Sbjct: 350 AETIAQATSLIQAAGLTAPS 369
>gi|380027357|ref|XP_003697393.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 45-like [Apis
florea]
Length = 482
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
R ND+PP+SRLF++C K + EDDLR+ F FG I++I VKDR TGE+KGV YI+FSKT
Sbjct: 17 RSKNDDPPNSRLFVICHKSLEEDDLRKAFEKFGKIEDIWVVKDRITGENKGVTYIKFSKT 76
Query: 74 SEAAKAVEEMNGEFLPNHSKPIKVLIAA 101
SEAA A+EEMNG+ L + +PIKV+IA+
Sbjct: 77 SEAAFALEEMNGKMLGSVGRPIKVMIAS 104
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 113/260 (43%), Gaps = 77/260 (29%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
RE N+E RLF + K +T+ +L+Q F G I+ VKDRNT ESKG Y+ F K
Sbjct: 112 RETNEEERWVRLFCVLPKSMTDSELQQEFXKIGPIEYATVVKDRNTNESKGFGYVXFKKV 171
Query: 74 SEAAKAVEEMNGEFL-----PNHSKP-------------------------------IKV 97
S AAKA EE + ++ P KP I +
Sbjct: 172 SSAAKAFEECDRKYKAVFAEPKKPKPEHIDVKYNNGLSSHYDGTSGGYSSSNFGKSSISL 231
Query: 98 LIAAKLEFKEGYRGGQKIS---------------------------VQYTSPQ------- 123
IA EGY Q I+ V+Y P+
Sbjct: 232 EIATNYPNSEGYTHLQVIAHPALNQDQLWKLFDIVPGLDYCHLKNDVRYRMPRGQAVVVY 291
Query: 124 ----SAAYARDKFHGFAYPPGIPMVVVPDFSYGLPRNGASALGGNAALSVVDSKGALQSL 179
+AAYAR+KFHGF YPPG M+V PD S P+N A+ ++ + ++ L L
Sbjct: 292 SNPSAAAYAREKFHGFEYPPGHRMIVKPDLSSAPPKN---AIKPGSSGGIASARTDLAHL 348
Query: 180 TKALAQATSLLRSAGLSTDS 199
+ +AQATSL+++AGL+ S
Sbjct: 349 AETIAQATSLIQAAGLTAPS 368
>gi|66547535|ref|XP_395582.2| PREDICTED: RNA-binding protein 45-like [Apis mellifera]
Length = 482
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
R ND+PP+SRLF++C K + EDDLR+ F FG I++I VKDR TGE+KGV YI+FSKT
Sbjct: 17 RSKNDDPPNSRLFVICHKSLEEDDLRKAFEKFGKIEDIWVVKDRITGENKGVTYIKFSKT 76
Query: 74 SEAAKAVEEMNGEFLPNHSKPIKVLIAA 101
SEAA A+EEMNG+ L + +PIKV+IA+
Sbjct: 77 SEAAFALEEMNGKMLGSVGRPIKVMIAS 104
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 115/260 (44%), Gaps = 77/260 (29%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
RE N+E RLF + K +T+ +L+Q F FG I+ VKDRNT ESKG Y++F K
Sbjct: 112 RETNEEERWVRLFCVLPKSMTDSELQQEFLKFGPIEYATVVKDRNTNESKGFGYVKFKKV 171
Query: 74 SEAAKAVEEMNGEFL-----PNHSKP-------------------------------IKV 97
S AAKA EE + ++ P KP I +
Sbjct: 172 SSAAKAFEECDRKYKAVFAEPKKPKPEHIDVKYNNGLSSHYDGTSGGYSSSNFGKSSISL 231
Query: 98 LIAAKLEFKEGYRGGQKIS---------------------------VQYTSPQ------- 123
IA EGY Q I+ V+Y P+
Sbjct: 232 EIATNYPNSEGYTHLQVIAHPALNQDQLWKLFDIVPGLDYCHLKNDVRYRMPRGQAVVVY 291
Query: 124 ----SAAYARDKFHGFAYPPGIPMVVVPDFSYGLPRNGASALGGNAALSVVDSKGALQSL 179
+AAYAR+KFHGF YPPG M+V PD S P+N A+ ++ + ++ L L
Sbjct: 292 SNPSAAAYAREKFHGFEYPPGHRMIVKPDLSSAPPKN---AIKPGSSGGIASARTDLAHL 348
Query: 180 TKALAQATSLLRSAGLSTDS 199
+ +AQATSL+++AGL+ S
Sbjct: 349 AETIAQATSLIQAAGLTAPS 368
>gi|312376519|gb|EFR23578.1| hypothetical protein AND_12645 [Anopheles darlingi]
Length = 578
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
D PP SRLFI+C K VTED+LR+ F FG+I+EI VKDR+TGE KGVAYI+++KTS+AA
Sbjct: 22 DIPPMSRLFIICSKSVTEDNLREHFEKFGDIEEIWIVKDRSTGEGKGVAYIKYAKTSDAA 81
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIAA 101
+A+EEMNG+ + N+++PIKVL+AA
Sbjct: 82 RALEEMNGKCVGDNNTRPIKVLVAA 106
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 12 RSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
R + N+E + RLF++ KD+TE+ LR+ F +G + + ++D+ T E KG AY++F
Sbjct: 113 RKQTENEEEKYLRLFVIIPKDMTEEALREEFGKYGTVDLVTIIRDKVTKEGKGFAYVKFG 172
Query: 72 KTSEAAKAVEEMNGEFLPNHSKP 94
+ AA A E + ++ ++P
Sbjct: 173 RFLHAALAFEGCDAKYKAVFAEP 195
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 116 SVQYTSPQSAAYARDKFHGFAYPPGIPMVV 145
+V Y + QSA YARDK HG YPPG +++
Sbjct: 357 TVVYNNGQSAMYARDKIHGLEYPPGERLII 386
>gi|156554617|ref|XP_001604889.1| PREDICTED: RNA-binding protein 45-like isoform 1 [Nasonia
vitripennis]
gi|345493454|ref|XP_003427077.1| PREDICTED: RNA-binding protein 45-like isoform 2 [Nasonia
vitripennis]
Length = 489
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 72/88 (81%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
R ND+PP+SRLF++C K + E++LR+ F FGNI++I VKDRNTGE+KGV YI+++KT
Sbjct: 18 RCKNDDPPNSRLFVICHKSLEEEELRKAFEKFGNIEDIWVVKDRNTGENKGVTYIKYAKT 77
Query: 74 SEAAKAVEEMNGEFLPNHSKPIKVLIAA 101
S+AA A+EEMNG+ L + +PIKV+IA+
Sbjct: 78 SQAAFALEEMNGKMLSSVGRPIKVMIAS 105
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 15/91 (16%)
Query: 116 SVQYTSPQSAAYARDKFHGFAYPPGIPMVVVPDFS----------YGLPRNGASALGGNA 165
+V YT+P +AAYAR+KFHGF YP G M+V PD + G+P N + GG
Sbjct: 288 TVVYTNPNAAAYAREKFHGFEYPLGHRMIVKPDLTGALPQKPGLKQGIPSNNITTPGG-- 345
Query: 166 ALSVVDSKGALQSLTKALAQATSLLRSAGLS 196
VV ++ L L + +AQATSL++ AGL+
Sbjct: 346 ---VVAARTDLAQLAETIAQATSLIQQAGLT 373
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
RE N+E RLF + K +T+ +L+Q FS FG I+ + VKDR+T ESKG Y++F K
Sbjct: 113 RETNEEERWVRLFCVLPKSMTDSELQQEFSKFGAIEYVTVVKDRSTNESKGFGYVKFKKV 172
Query: 74 SEAAKAVEEMNGEFLPNHSKPIK 96
S AA+A EE + ++ ++P K
Sbjct: 173 SSAARAFEECDRKYKAVFAEPKK 195
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 220 QTLHGAEMYGSRLKVMEADPPK-GDRNRKRQRLDD 253
+ LHG E+ GSRLKV+EA+ GD RKR R+D+
Sbjct: 452 EALHGQEICGSRLKVLEAEERNVGDDRRKRLRMDE 486
>gi|405975555|gb|EKC40114.1| RNA-binding protein 45 [Crassostrea gigas]
Length = 564
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 68/95 (71%), Gaps = 3/95 (3%)
Query: 10 HD-RSREYNDE--PPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVA 66
HD R RE ++ PP+SRLFILCGK + ED R F FG +++I VKDR T E KGV
Sbjct: 6 HDKRHREMQEDVKPPNSRLFILCGKGIREDTFRDAFGKFGTVEDIWIVKDRRTMEEKGVV 65
Query: 67 YIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIAA 101
YI+FSK SEAA A+EEMN + LP H KP+KVLIA+
Sbjct: 66 YIKFSKASEAALAMEEMNMKTLPGHPKPLKVLIAS 100
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 24 RLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
RLF++C K +++DL++ F FG+I + V D+++GE KG Y+RF + AA A E
Sbjct: 118 RLFVICPKSYSKEDLKKEFEKFGDIDSVMVVSDKHSGERKGFGYVRFHRPYHAALAFE-- 175
Query: 84 NGEFLPNHSKP 94
F P + P
Sbjct: 176 -NSFKPKFADP 185
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 118 QYTSPQSAAYARDKFHGFAYPPGIPMVV 145
+Y SPQ A YARDK +GF YP G ++V
Sbjct: 352 RYISPQCANYARDKLNGFEYPIGSRLLV 379
>gi|322780877|gb|EFZ10106.1| hypothetical protein SINV_16601 [Solenopsis invicta]
Length = 270
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 116/261 (44%), Gaps = 76/261 (29%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
RE N+E RLF + K +T+ +L+Q FS FG I+ VKDR+T ESKG Y++F K
Sbjct: 11 RETNEEERWVRLFCVLPKTMTDSELQQEFSKFGAIEYATVVKDRSTNESKGFGYVKFKKV 70
Query: 74 SEAAKAVEEMNGEFL-----PNHSKP--------------------------------IK 96
S AA+A EE + ++ P KP I
Sbjct: 71 SSAARAFEECDRKYKAVFAEPKKPKPDHNDAKYNNGLSSAAYDGTSGSYGSSNFGKSSIS 130
Query: 97 VLIAAKLEFKEGYRGGQKIS---------------------------VQYTSPQSAA--- 126
+ IA EGY Q I+ V+Y P+ A
Sbjct: 131 LEIATNYSNSEGYTRLQVIAHPALNQDQLWKLFDIVPGMDYCHLKTDVRYRMPRGQAVVV 190
Query: 127 --------YARDKFHGFAYPPGIPMVVVPDFSYGLPRNGASALGGNAALSVVDSKGALQS 178
YAR+KFHGF YPPG M+V PD + P++ S GG+ A SV ++ L
Sbjct: 191 YNNPSAAAYAREKFHGFEYPPGHRMIVKPDLTSAPPKS-TSKPGGSTAGSVASARTDLAH 249
Query: 179 LTKALAQATSLLRSAGLSTDS 199
L + +AQATSL+++AGL+ S
Sbjct: 250 LAETIAQATSLIQAAGLTAPS 270
>gi|195454717|ref|XP_002074369.1| GK10557 [Drosophila willistoni]
gi|194170454|gb|EDW85355.1| GK10557 [Drosophila willistoni]
Length = 470
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 67/85 (78%)
Query: 17 NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+D+PP SRLFI+C K TEDD R+ FSP+G I++I VKD++T E+KG+AY++FSKTS+A
Sbjct: 21 DDDPPMSRLFIICNKAHTEDDFREAFSPYGEIEDIWVVKDKHTQENKGIAYVKFSKTSDA 80
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAA 101
AKA EEMNG + + +KVL+AA
Sbjct: 81 AKAQEEMNGTTIGKTDRTLKVLVAA 105
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 17 NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
N++ + RLFI+ K TEDD+R F+ +G ++ + V+++N G KG Y+RF+K A
Sbjct: 116 NEQEKYVRLFIVIPKTATEDDIRDEFAQWGEVESVTIVREKNNGNPKGFGYVRFTKFYYA 175
Query: 77 AKAVEEMNGEFLPNHSKP 94
A A E + ++ ++P
Sbjct: 176 AVAFENCSAKYKAVFAEP 193
>gi|195491718|ref|XP_002093683.1| GE21435 [Drosophila yakuba]
gi|194179784|gb|EDW93395.1| GE21435 [Drosophila yakuba]
Length = 470
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 68/85 (80%)
Query: 17 NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+D+PP SRLFI+C K TE+D R+ FSP+G I++I VKD++T E+KG+AY++FSKTS+A
Sbjct: 22 DDDPPMSRLFIICNKAHTEEDFREAFSPYGEIEDIWVVKDKHTQENKGIAYVKFSKTSDA 81
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAA 101
AKA EEMNG+ + + +KVL+AA
Sbjct: 82 AKAQEEMNGKTIGKMDRTLKVLVAA 106
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 1 MDRNYRI-----NTHDRSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVK 55
MDR ++ ++ N++ + RLFI+ K TE+D+R+ FS +G+++ + VK
Sbjct: 96 MDRTLKVLVAANRNQGSNKSENEQEKYVRLFIVIPKTATEEDIREEFSQWGDVESVTIVK 155
Query: 56 DRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKP 94
++N G KG Y+RF+K AA A E + ++ ++P
Sbjct: 156 EKNNGNPKGFGYVRFTKFYYAAVAFENCSAKYRAVFAEP 194
>gi|194866430|ref|XP_001971880.1| GG15216 [Drosophila erecta]
gi|190653663|gb|EDV50906.1| GG15216 [Drosophila erecta]
Length = 470
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 68/85 (80%)
Query: 17 NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+D+PP SRLFI+C K TE+D R+ FSP+G I++I VKD++T E+KG+AY++FSKTS+A
Sbjct: 22 DDDPPMSRLFIICNKAHTEEDFREAFSPYGEIEDIWVVKDKHTQENKGIAYVKFSKTSDA 81
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAA 101
AKA EEMNG+ + + +KVL+AA
Sbjct: 82 AKAQEEMNGKTIGKMDRTLKVLVAA 106
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 1 MDRNYRI-----NTHDRSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVK 55
MDR ++ ++ N++ + RLFI+ K TE+D+R+ FS +G+++ + VK
Sbjct: 96 MDRTLKVLVAANRNQGSNKSENEQEKYVRLFIVIPKTATEEDIREEFSQWGDVESVTIVK 155
Query: 56 DRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKP 94
++N G KG Y+RF+K AA A E + ++ ++P
Sbjct: 156 EKNNGNPKGFGYVRFTKFYYAAVAFENCSAKYKAVFAEP 194
>gi|24657454|ref|NP_647887.1| CG1316 [Drosophila melanogaster]
gi|23092993|gb|AAF47879.2| CG1316 [Drosophila melanogaster]
gi|25012783|gb|AAN71483.1| RE70333p [Drosophila melanogaster]
gi|220950578|gb|ACL87832.1| CG1316-PA [synthetic construct]
gi|220959414|gb|ACL92250.1| CG1316-PA [synthetic construct]
Length = 470
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 68/85 (80%)
Query: 17 NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+D+PP SRLFI+C K TE+D R+ FSP+G I++I VKD++T E+KG+AY++FSKTS+A
Sbjct: 22 DDDPPMSRLFIICNKAHTEEDFREAFSPYGEIEDIWVVKDKHTQENKGIAYVKFSKTSDA 81
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAA 101
AKA EEMNG+ + + +KVL+AA
Sbjct: 82 AKAQEEMNGKTIGKMDRTLKVLVAA 106
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 1 MDRNYRI-----NTHDRSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVK 55
MDR ++ ++ N++ + RLFI+ K TE+D+R+ FS +G+++ + VK
Sbjct: 96 MDRTLKVLVAANRNQGSNKSENEQEKYVRLFIVIPKTATEEDIREEFSQWGDVESVTIVK 155
Query: 56 DRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKP 94
++N G KG Y+RF+K AA A E + ++ ++P
Sbjct: 156 EKNNGNPKGFGYVRFTKFYYAAVAFENCSAKYKAVFAEP 194
>gi|195337421|ref|XP_002035327.1| GM14647 [Drosophila sechellia]
gi|195587736|ref|XP_002083617.1| GD13832 [Drosophila simulans]
gi|194128420|gb|EDW50463.1| GM14647 [Drosophila sechellia]
gi|194195626|gb|EDX09202.1| GD13832 [Drosophila simulans]
Length = 470
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 68/85 (80%)
Query: 17 NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+D+PP SRLFI+C K TE+D R+ FSP+G I++I VKD++T E+KG+AY++FSKTS+A
Sbjct: 22 DDDPPMSRLFIICNKAHTEEDFREAFSPYGEIEDIWVVKDKHTQENKGIAYVKFSKTSDA 81
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAA 101
AKA EEMNG+ + + +KVL+AA
Sbjct: 82 AKAQEEMNGKTIGKMDRTLKVLVAA 106
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 1 MDRNYRI-----NTHDRSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVK 55
MDR ++ ++ N++ + RLFI+ K TE+D+R+ FS +G+++ + VK
Sbjct: 96 MDRTLKVLVAANRNQGSNKSENEQEKYVRLFIVIPKTATEEDIREEFSQWGDVESVTIVK 155
Query: 56 DRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKP 94
++N G KG Y+RF+K AA A E + ++ ++P
Sbjct: 156 EKNNGNPKGFGYVRFTKFYYAAVAFENCSAKYKAVFAEP 194
>gi|188528716|ref|NP_001120874.1| RNA-binding protein 45 [Danio rerio]
Length = 467
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 69/94 (73%)
Query: 7 INTHDRSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVA 66
++ +R Y DEPP+SRLF++ K +TED +R+ F+ FG IQ+I VKD+ T ESKGVA
Sbjct: 1 MDDSNRPSSYLDEPPNSRLFLVTSKSITEDTIRESFASFGEIQDIWVVKDKQTKESKGVA 60
Query: 67 YIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIA 100
+I+F+K+S+A A+EEM+G L +KPIKV IA
Sbjct: 61 FIKFAKSSQACTAMEEMHGRCLAEGTKPIKVFIA 94
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
R+ DE +R+F++ K TEDDL++ F +G+I+ ++++ TG+SKG+ Y+RF K
Sbjct: 103 RDVEDEE-LTRIFVMIPKTFTEDDLKETFKVYGDIEYAIIIRNKTTGDSKGLGYVRFHKP 161
Query: 74 SEAAKAVEEMNGEF 87
S+AAKAVE + F
Sbjct: 162 SQAAKAVENCDKTF 175
>gi|194747413|ref|XP_001956146.1| GF25059 [Drosophila ananassae]
gi|190623428|gb|EDV38952.1| GF25059 [Drosophila ananassae]
Length = 469
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 67/85 (78%)
Query: 17 NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+D+PP SRLFI+C K TE+D R+ FSPFG I +I VKD++T E+KG+AY++F+KTS+A
Sbjct: 22 DDDPPMSRLFIICNKAHTEEDFREAFSPFGEIDDIWVVKDKHTQENKGIAYVKFAKTSDA 81
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAA 101
AKA EEMNG+ + + +KVL+AA
Sbjct: 82 AKAQEEMNGKTIGKMDRTLKVLVAA 106
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 1 MDRNYRI-----NTHDRSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVK 55
MDR ++ ++ N+ + RLFI+ K TE+D+R F+ +G+++ + VK
Sbjct: 96 MDRTLKVLVAANRNQGSNKSENEHEKYVRLFIVIPKTATEEDIRDEFAQWGDVESVTIVK 155
Query: 56 DRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKP 94
++N G KG Y+RF+K AA A E + ++ ++P
Sbjct: 156 EKNNGPPKGFGYVRFTKFYYAAVAFENCSAKYKAVFAEP 194
>gi|195135455|ref|XP_002012148.1| GI16592 [Drosophila mojavensis]
gi|193918412|gb|EDW17279.1| GI16592 [Drosophila mojavensis]
Length = 469
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 72/92 (78%), Gaps = 2/92 (2%)
Query: 12 RSREY--NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIR 69
R ++Y +D+PP SRLFI+C K TE+D R+ FSP+G I++I VKD++T E+KG+AY++
Sbjct: 13 RGQDYSNDDDPPMSRLFIICNKAHTEEDFREAFSPYGEIEDIWVVKDKHTQENKGIAYVK 72
Query: 70 FSKTSEAAKAVEEMNGEFLPNHSKPIKVLIAA 101
FSKTS+AAKA E+MNG+ + + +KVL+AA
Sbjct: 73 FSKTSDAAKAQEQMNGKTIGKTDRTLKVLVAA 104
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 17 NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
N++ + RLFI+ K TEDD+R FS +G ++ + V+++N G KG Y+RF+K A
Sbjct: 115 NEQEKYVRLFIVIPKTATEDDIRDEFSQWGEVENVTIVREKNNGNPKGFGYVRFTKFYYA 174
Query: 77 AKAVEEMNGEFLPNHSKP 94
A A E + ++ ++P
Sbjct: 175 AVAFENCSSKYKAVFAEP 192
>gi|125977130|ref|XP_001352598.1| GA12086 [Drosophila pseudoobscura pseudoobscura]
gi|195168109|ref|XP_002024874.1| GL17872 [Drosophila persimilis]
gi|54641346|gb|EAL30096.1| GA12086 [Drosophila pseudoobscura pseudoobscura]
gi|194108304|gb|EDW30347.1| GL17872 [Drosophila persimilis]
Length = 466
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 68/85 (80%)
Query: 17 NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+D+PP SRLFI+C K TEDD R+ FS +G+I++I VKD++T E+KG+AY++FSKTS+A
Sbjct: 21 DDDPPMSRLFIICNKAHTEDDFREAFSAYGDIEDIWVVKDKHTQENKGIAYVKFSKTSDA 80
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAA 101
AKA EEMNG+ + + +KVL+AA
Sbjct: 81 AKAQEEMNGKTIGKMDRTLKVLVAA 105
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 1 MDRNYRI-----NTHDRSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVK 55
MDR ++ ++ N++ + RLFI+ K TEDD+R F+ +G ++ + V+
Sbjct: 95 MDRTLKVLVAANRNQGSNKSENEQEKYLRLFIVIPKTATEDDIRDEFAQWGEVESVTIVR 154
Query: 56 DRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKP 94
++N G KG Y+RF+K AA A E + ++ ++P
Sbjct: 155 EKNNGNPKGFGYVRFTKFYYAAVAFENCSPKYKAVFAEP 193
>gi|91083715|ref|XP_970185.1| PREDICTED: similar to AGAP005505-PA [Tribolium castaneum]
gi|270007883|gb|EFA04331.1| hypothetical protein TcasGA2_TC014625 [Tribolium castaneum]
Length = 464
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 66/84 (78%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SRLFI+ K + EDD R+ F FGNI+EI V+DR TGESKGV YI++SKTSEAA
Sbjct: 16 DEPPNSRLFIIGSKLLCEDDFRKAFEEFGNIEEIWMVRDRQTGESKGVTYIKYSKTSEAA 75
Query: 78 KAVEEMNGEFLPNHSKPIKVLIAA 101
+A+E MNG+ + ++ I+V+IAA
Sbjct: 76 RALEAMNGKCIGKLNRSIRVMIAA 99
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 100/245 (40%), Gaps = 70/245 (28%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
R+ N+E RLF++ K +T+ +L F FG I ++D+ + ESKG AY+++ K
Sbjct: 107 RDSNEEERTLRLFVVVPKSMTDSELYDTFKEFGEIDYATIMRDKESRESKGFAYVKYFKF 166
Query: 74 SEAAKAVEEMNGEFLPNHSKPIKVLIAAKLEFKEGYRGGQKIS------------VQYT- 120
S AA A E + ++ ++P K + +F + KI+ V YT
Sbjct: 167 SHAAAAFETCDKKYKAVFAEPRKPNMKTDEKFSNSWSSLNKINSSALPLPTVSNPVGYTK 226
Query: 121 -----SPQ------------------------------------------SAAYARDKFH 133
SPQ AAYA++K H
Sbjct: 227 LIAIVSPQVNQDQLWKLFDIVPGLDYCHLRLEGRPKPNKGVASVVYNSAQWAAYAKEKLH 286
Query: 134 GFAYPPGIPMVVVPDFSYGLPRNGASALGGNAALSVVDSKGALQSLTKALAQATSLLRSA 193
GF YPPG ++V PD G + S + + + +AQA++L+++A
Sbjct: 287 GFEYPPGNRIIVKPDHEE----------GSRSTSSERQKHSDIFQIAETIAQASNLIQAA 336
Query: 194 GLSTD 198
GLS D
Sbjct: 337 GLSPD 341
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 220 QTLHGAEMYGSRLKVMEADPPKGDRNRKRQRLDD 253
+TLHGAE+ G R+KV++A+ K + NRKRQR+++
Sbjct: 430 KTLHGAEVCGIRIKVLKAE-EKQEHNRKRQRVEE 462
>gi|195012195|ref|XP_001983522.1| GH15941 [Drosophila grimshawi]
gi|193897004|gb|EDV95870.1| GH15941 [Drosophila grimshawi]
Length = 477
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 72/92 (78%), Gaps = 2/92 (2%)
Query: 12 RSREY--NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIR 69
R ++Y +D+PP SRLFI+C K TE+D R+ F+P+G I++I VKD++T E+KG+AY++
Sbjct: 13 RGQDYSNDDDPPMSRLFIICNKAHTEEDFREAFAPYGEIEDIWVVKDKHTQENKGIAYVK 72
Query: 70 FSKTSEAAKAVEEMNGEFLPNHSKPIKVLIAA 101
FSKTS+AAKA E+MNG+ + + +KVL+AA
Sbjct: 73 FSKTSDAAKAQEQMNGKTIGKTDRTLKVLVAA 104
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 17 NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
N++ + RLFI+ K TEDD+R F+ +G ++ + V+++N G KG Y+RF+K A
Sbjct: 115 NEQEKYVRLFIVIPKTATEDDIRDEFAQWGEVETVTIVREKNNGSPKGFGYVRFTKFYYA 174
Query: 77 AKAVEEMNGEFLPNHSKP 94
A A E + ++ ++P
Sbjct: 175 AVAFENCSAKYKAVFAEP 192
>gi|195375104|ref|XP_002046343.1| GJ12844 [Drosophila virilis]
gi|194153501|gb|EDW68685.1| GJ12844 [Drosophila virilis]
Length = 468
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 72/92 (78%), Gaps = 2/92 (2%)
Query: 12 RSREY--NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIR 69
R ++Y +D+PP SRLFI+C K TE+D R+ F+P+G I++I VKD++T E+KG+AY++
Sbjct: 13 RGQDYSNDDDPPMSRLFIICNKAHTEEDFREAFAPYGEIEDIWVVKDKHTQENKGIAYVK 72
Query: 70 FSKTSEAAKAVEEMNGEFLPNHSKPIKVLIAA 101
FSKTS+AAKA E+MNG+ + + +KVL+AA
Sbjct: 73 FSKTSDAAKAQEQMNGKTIGKTDRTLKVLVAA 104
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 17 NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
N++ + RLFI+ K TEDD+R F+ +G ++ + V+++N G KG Y+RF+K A
Sbjct: 115 NEQEKYVRLFIVIPKTATEDDIRDEFAQWGEVENVTIVREKNNGSPKGFGYVRFTKFYYA 174
Query: 77 AKAVEEMNGEFLPNHSKP 94
A A E + ++ ++P
Sbjct: 175 AVAFENCSAKYKAVFAEP 192
>gi|158294272|ref|XP_315504.4| AGAP005505-PA [Anopheles gambiae str. PEST]
gi|157015487|gb|EAA11285.4| AGAP005505-PA [Anopheles gambiae str. PEST]
Length = 511
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 73/109 (66%), Gaps = 15/109 (13%)
Query: 8 NTHDRSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKG--- 64
N + D PP SRLFI+C K VTE++LR+ F FG+I+EI VKDR TGE KG
Sbjct: 12 NNFTEEKSSADTPPMSRLFIICSKSVTEENLREHFDKFGDIEEIWIVKDRATGEGKGITE 71
Query: 65 ------------VAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIAA 101
VAYI+++KTS+AA+A+EEMNG+ + ++++PIKVL+AA
Sbjct: 72 QLEKEEQEGARRVAYIKYAKTSDAARALEEMNGKCVGDNTRPIKVLVAA 120
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 44/70 (62%)
Query: 12 RSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
R + N+E + RLF++ KD+TE+ LR+ F +G + + ++D+ T E KG AY++F
Sbjct: 127 RKQTENEEEKYLRLFVIIPKDMTEEALREEFGKYGTVDLVTIIRDKVTKEGKGFAYVKFG 186
Query: 72 KTSEAAKAVE 81
+ AA+A E
Sbjct: 187 RFLHAAQAFE 196
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 116 SVQYTSPQSAAYARDKFHGFAYPPGIPMVV 145
+V Y + QSA YARDK HG YPPG +++
Sbjct: 321 TVVYNNSQSAMYARDKIHGLEYPPGERLII 350
>gi|196001693|ref|XP_002110714.1| hypothetical protein TRIADDRAFT_1749 [Trichoplax adhaerens]
gi|190586665|gb|EDV26718.1| hypothetical protein TRIADDRAFT_1749, partial [Trichoplax
adhaerens]
Length = 289
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDR-NTGESKGVAYIRFSKTSEA 76
D PP+SRLFILC K + EDDLR FSPFG IQ++ V+D N +SKG+AY++FSK S A
Sbjct: 1 DYPPYSRLFILCDKSLIEDDLRNAFSPFGCIQDVWVVRDHANNNQSKGMAYLKFSKASSA 60
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
A+A+E M+G+ L +H K +K +IA
Sbjct: 61 AQAIEAMDGQILGDHQKSLKCMIA 84
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DE +RLF++C +D TE+DL++ F FG+I + VKD T +SKG+ Y++F+K S AA
Sbjct: 97 DEYDRARLFVVCPRDYTEEDLKEKFVEFGSIDYCQIVKDHTTKKSKGLGYVKFNKASAAA 156
Query: 78 KAVEEMNGEFLPNHSKP 94
A+E + F ++P
Sbjct: 157 IALENCDASFRAVLAEP 173
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 24 RLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
RLF++ VT++ L + F + + +R TG SKG Y+ + + AA A E++
Sbjct: 216 RLFVIVSTKVTQEQLHRLFDIIPGMLSCKIKLNRQTGGSKGFGYVTYCSLAMAAYAREKL 275
Query: 84 NGEFLPNHSKPI 95
NG P +K I
Sbjct: 276 NGIEYPIGNKLI 287
>gi|432951189|ref|XP_004084740.1| PREDICTED: RNA-binding protein 45-like [Oryzias latipes]
Length = 463
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 67/83 (80%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
D+PP+SRLF++ + ++ED+LR+ FS FG+IQ + VKDR T ESKG++YI+F+K+S+A
Sbjct: 14 DDPPNSRLFLVTSRSISEDELRERFSRFGDIQGVWVVKDRQTKESKGISYIKFAKSSQAC 73
Query: 78 KAVEEMNGEFLPNHSKPIKVLIA 100
A+EEM+G+ L + SKPIKV IA
Sbjct: 74 AAMEEMHGQMLSDKSKPIKVFIA 96
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 12 RSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
R R+ DE +R+F++ K TE+DL+ F +G+I+ +K++ TGESKG+ Y+R+
Sbjct: 103 RHRDVEDEE-LTRIFVMIPKTFTEEDLKNTFKEYGDIEYCVIIKNKLTGESKGLGYVRYY 161
Query: 72 KTSEAAKAVEEMNGEF 87
K S+AA A+E + +
Sbjct: 162 KPSQAAIAIENCDKSY 177
>gi|354477712|ref|XP_003501063.1| PREDICTED: RNA-binding protein 45-like [Cricetulus griseus]
gi|344252496|gb|EGW08600.1| RNA-binding protein 45 [Cricetulus griseus]
Length = 477
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 69/84 (82%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K +E LR+ FSPFG+IQ+I V+D++T ESKGVA+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTSESVLRERFSPFGDIQDIWVVRDKHTKESKGVAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN +KPIKV IA
Sbjct: 81 RAMEEMHGQCLGPNDTKPIKVFIA 104
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|23463293|ref|NP_695218.1| RNA-binding protein 45 [Rattus norvegicus]
gi|59797634|sp|Q8CFD1.1|RBM45_RAT RecName: Full=RNA-binding protein 45; AltName:
Full=Developmentally-regulated RNA-binding protein 1;
AltName: Full=RNA-binding motif protein 45
gi|22831320|dbj|BAC16206.1| developmentally regulated RNA-binding protein 1 [Rattus norvegicus]
Length = 476
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 69/84 (82%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K +E LR+ FSPFG+IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTSESVLREHFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN +KPIKV IA
Sbjct: 81 RAMEEMHGQCLGPNDTKPIKVFIA 104
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSVIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|149022330|gb|EDL79224.1| developmentally regulated RNA-binding protein 1 [Rattus norvegicus]
Length = 476
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 69/84 (82%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K +E LR+ FSPFG+IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTSESVLREHFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN +KPIKV IA
Sbjct: 81 RAMEEMHGQCLGPNDTKPIKVFIA 104
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSVIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|444723102|gb|ELW63766.1| RNA-binding protein 45 [Tupaia chinensis]
Length = 414
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGEIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
KA+EEM+G+ L PN +KPIKV IA
Sbjct: 81 KAMEEMHGQCLGPNDTKPIKVFIA 104
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 16/133 (12%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEFLPNHSKPI-KVLIAAKLEFKEGYRG--------------GQKISVQYTSPQSAAY 127
+ F ++P K +++ ++ R G + VQY + SA Y
Sbjct: 181 CDRSFRAILAEPKNKASESSEQDYYSNMRQEALGHEPRINMFPFGHGV-VQYFNVASAIY 239
Query: 128 ARDKFHGFAYPPG 140
A+ K HGF YPPG
Sbjct: 240 AKYKLHGFQYPPG 252
>gi|291391814|ref|XP_002712355.1| PREDICTED: RNA binding motif protein 45 isoform 1 [Oryctolagus
cuniculus]
Length = 474
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGEIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN SKPIKV IA
Sbjct: 81 RAMEEMHGQCLGPNDSKPIKVFIA 104
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|224055170|ref|XP_002197058.1| PREDICTED: RNA-binding protein 45, partial [Taeniopygia guttata]
Length = 463
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 67/88 (76%)
Query: 13 SREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
S E DEPP+SR+F++ GKD E +R+ FSPFG+IQ I ++DR T ES+G+A+I+F++
Sbjct: 5 SAEGPDEPPNSRVFVVLGKDTGEALIRERFSPFGDIQNIWLLRDRRTNESRGIAFIKFAR 64
Query: 73 TSEAAKAVEEMNGEFLPNHSKPIKVLIA 100
+S+A +A+EEM+G L SKPIKV IA
Sbjct: 65 SSQACRAMEEMHGRSLLPDSKPIKVFIA 92
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 46/62 (74%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+EE
Sbjct: 109 TRIFVMIPKTYTEEDLREKFKMYGDIEYCSIIKNKTTGESKGLGYVRYLKPSQAARAIEE 168
Query: 83 MN 84
+
Sbjct: 169 CD 170
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 117 VQYTSPQSAAYARDKFHGFAYPPGIPMVVV 146
+QY++ SA YA+ K HGF YPPG + V+
Sbjct: 273 IQYSTAASAIYAKYKLHGFEYPPGNRLTVI 302
>gi|357607355|gb|EHJ65466.1| hypothetical protein KGM_05650 [Danaus plexippus]
Length = 479
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 70/98 (71%)
Query: 4 NYRINTHDRSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESK 63
N R + R+ D P +SRLFI+C +++ ED+ R+ FS FG I+++R +D +GE K
Sbjct: 3 NRRKFPRNEERDREDVPVYSRLFIVCDRNLKEDNFREVFSKFGYIEDVRIPRDHKSGEPK 62
Query: 64 GVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIAA 101
GV +I+FSKTSEAA A+EEMN + +P S+P+KV++AA
Sbjct: 63 GVVFIKFSKTSEAALALEEMNLKVMPYSSRPLKVMVAA 100
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%)
Query: 8 NTHDRSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY 67
N D E + + RLF+ KD+ ED L + F +G+I ++ +DRNT E KG AY
Sbjct: 101 NKSDIQSEDHSNEKYRRLFLHIPKDMNEDMLEENFKKYGHIDDVLIQRDRNTREPKGFAY 160
Query: 68 IRFSKTSEAAKAVEEMNGEFLPNHSKP 94
I+F K SEAA A E+ ++ ++P
Sbjct: 161 IKFRKFSEAAFAFEQCEKKYRAIFAQP 187
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 14/109 (12%)
Query: 105 FKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPGIPMVVVP-DFSY-GLPRNGASALG 162
F + R K S QY++P SAAYA +K + F YPPG + V P D ++ PRN +
Sbjct: 259 FVDLVRNFSKGSAQYSNPVSAAYAVEKLNEFEYPPGQKIFVKPADTNFDSHPRNQEQSFS 318
Query: 163 G---------NAALSVVDSKGA-LQSLTKALAQATSLLR--SAGLSTDS 199
NA S +S L L +A+A+A+ L++ +AG+S D+
Sbjct: 319 DIPNAVSNLRNAIASTANSTSPDLVQLAEAIAEASKLIKMATAGVSDDN 367
>gi|93277070|ref|NP_694453.2| RNA-binding protein 45 [Homo sapiens]
gi|197102268|ref|NP_001125039.1| RNA-binding protein 45 [Pongo abelii]
gi|114581944|ref|XP_515938.2| PREDICTED: RNA-binding protein 45 [Pan troglodytes]
gi|397489084|ref|XP_003815567.1| PREDICTED: RNA-binding protein 45 [Pan paniscus]
gi|46362414|gb|AAH66549.1| RNA binding motif protein 45 [Homo sapiens]
gi|55726771|emb|CAH90147.1| hypothetical protein [Pongo abelii]
gi|119631451|gb|EAX11046.1| developmentally regulated RNA-binding protein 1, isoform CRA_c
[Homo sapiens]
gi|312150926|gb|ADQ31975.1| developmentally regulated RNA-binding protein 1 [synthetic
construct]
gi|410218046|gb|JAA06242.1| RNA binding motif protein 45 [Pan troglodytes]
gi|410261936|gb|JAA18934.1| RNA binding motif protein 45 [Pan troglodytes]
gi|410291320|gb|JAA24260.1| RNA binding motif protein 45 [Pan troglodytes]
gi|410354099|gb|JAA43653.1| RNA binding motif protein 45 [Pan troglodytes]
Length = 474
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG+IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN +KPIKV IA
Sbjct: 81 RAMEEMHGQCLGPNDTKPIKVFIA 104
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|426337850|ref|XP_004032907.1| PREDICTED: RNA-binding protein 45 [Gorilla gorilla gorilla]
Length = 474
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG+IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN +KPIKV IA
Sbjct: 81 RAMEEMHGQCLGPNDTKPIKVFIA 104
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKITGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|348585642|ref|XP_003478580.1| PREDICTED: RNA-binding protein 45-like [Cavia porcellus]
Length = 480
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG IQ+I V+D++T ESKG+A+I+F+++S+A
Sbjct: 25 DEPPNSRIFLVISKYTPEAVLRERFSPFGEIQDIWVVRDKHTKESKGIAFIKFARSSQAC 84
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN++KPIKV IA
Sbjct: 85 RAMEEMHGQCLEPNNTKPIKVFIA 108
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 125 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 184
Query: 83 MNGEF 87
+ F
Sbjct: 185 CDRSF 189
>gi|355565007|gb|EHH21496.1| hypothetical protein EGK_04578 [Macaca mulatta]
Length = 476
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG+IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN +KPIKV IA
Sbjct: 81 RAMEEMHGQCLGPNDTKPIKVFIA 104
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|297264420|ref|XP_001097905.2| PREDICTED: RNA-binding protein 45-like [Macaca mulatta]
Length = 476
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG+IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN +KPIKV IA
Sbjct: 81 RAMEEMHGQCLGPNDTKPIKVFIA 104
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|332209442|ref|XP_003253821.1| PREDICTED: uncharacterized protein LOC100594857 [Nomascus
leucogenys]
Length = 474
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG+IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN +KPIKV IA
Sbjct: 81 RAMEEMHGQCLGPNDTKPIKVFIA 104
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|402888753|ref|XP_003907713.1| PREDICTED: RNA-binding protein 45 [Papio anubis]
gi|380785205|gb|AFE64478.1| RNA-binding protein 45 [Macaca mulatta]
Length = 474
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG+IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN +KPIKV IA
Sbjct: 81 RAMEEMHGQCLGPNDTKPIKVFIA 104
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|59797947|sp|Q8IUH3.1|RBM45_HUMAN RecName: Full=RNA-binding protein 45; AltName:
Full=Developmentally-regulated RNA-binding protein 1;
Short=RB-1; AltName: Full=RNA-binding motif protein 45
gi|22831322|dbj|BAC16207.1| developmentally regulated RNA-binding protein 1 [Homo sapiens]
Length = 476
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG+IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN +KPIKV IA
Sbjct: 81 RAMEEMHGQCLGPNDTKPIKVFIA 104
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|403258671|ref|XP_003921876.1| PREDICTED: RNA-binding protein 45 [Saimiri boliviensis boliviensis]
Length = 474
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG+IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN +KPIKV IA
Sbjct: 81 RAMEEMHGQCLGPNDTKPIKVFIA 104
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|390464344|ref|XP_002749320.2| PREDICTED: RNA-binding protein 45-like [Callithrix jacchus]
Length = 473
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG+IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN +KPIKV IA
Sbjct: 81 RAMEEMHGQCLGPNDTKPIKVFIA 104
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|291391816|ref|XP_002712356.1| PREDICTED: RNA binding motif protein 45 isoform 2 [Oryctolagus
cuniculus]
Length = 483
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGEIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN SKPIKV IA
Sbjct: 81 RAMEEMHGQCLGPNDSKPIKVFIA 104
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|348501482|ref|XP_003438298.1| PREDICTED: RNA-binding protein 45-like [Oreochromis niloticus]
Length = 466
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 65/83 (78%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
D+PP+SRLF++ + +TED+LR+ F FG+IQ + VKD+ T ESKG+AY++F+K+S+A
Sbjct: 14 DDPPNSRLFVVTSRSITEDELRESFYVFGDIQGVWVVKDKQTKESKGIAYVKFAKSSQAC 73
Query: 78 KAVEEMNGEFLPNHSKPIKVLIA 100
A+EEM+G+ L +KP+KV IA
Sbjct: 74 LAMEEMHGKVLVEGTKPVKVFIA 96
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 12 RSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
R R+ DE +R+F++ K +E+DL++ F +G+I+ +K++ TGESKG+ Y+R+
Sbjct: 103 RHRDVEDEE-LTRIFVMIPKSFSEEDLKETFKEYGDIEYCVIIKNKFTGESKGLGYVRYY 161
Query: 72 KTSEAAKAVEEMNGEF 87
K S+AA A+E + +
Sbjct: 162 KPSQAALAIENCDKAY 177
>gi|22001377|gb|AAM88417.1|AF526533_1 putative RNA binding protein RB-1 [Homo sapiens]
Length = 328
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG+IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN +KPIKV IA
Sbjct: 81 RAMEEMHGQCLGPNDTKPIKVFIA 104
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|311272711|ref|XP_003133555.1| PREDICTED: RNA-binding protein 45 [Sus scrofa]
Length = 474
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGEIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN +KPIKV IA
Sbjct: 81 RAMEEMHGQCLSPNDTKPIKVFIA 104
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|355715813|gb|AES05410.1| RNA binding motif protein 45 [Mustela putorius furo]
Length = 455
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 3 DEPPNSRIFLVISKYTPESVLRERFSPFGEIQDIWVVRDKHTKESKGIAFVKFARSSQAC 62
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN +KPIKV IA
Sbjct: 63 RAMEEMHGQCLSPNDTKPIKVFIA 86
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 103 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 162
Query: 83 MNGEF 87
+ F
Sbjct: 163 CDRSF 167
>gi|345797183|ref|XP_535977.3| PREDICTED: RNA-binding protein 45 [Canis lupus familiaris]
Length = 476
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGEIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN +KPIKV IA
Sbjct: 81 RAMEEMHGQCLSPNDTKPIKVFIA 104
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|301766904|ref|XP_002918872.1| PREDICTED: RNA-binding protein 45-like [Ailuropoda melanoleuca]
gi|281352312|gb|EFB27896.1| hypothetical protein PANDA_007405 [Ailuropoda melanoleuca]
Length = 474
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGEIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN +KPIKV IA
Sbjct: 81 RAMEEMHGQCLSPNDTKPIKVFIA 104
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|23510273|ref|NP_700454.1| RNA-binding protein 45 [Mus musculus]
gi|59797944|sp|Q8BHN5.1|RBM45_MOUSE RecName: Full=RNA-binding protein 45; AltName:
Full=Developmentally-regulated RNA-binding protein 1;
Short=RB-1; AltName: Full=RNA-binding motif protein 45
gi|22831324|dbj|BAC16208.1| developmentally regulated RNA-binding protein 1 [Mus musculus]
gi|24209917|gb|AAN41644.1| putative RNA binding protein RB-1 [Mus musculus]
gi|34784330|gb|AAH57890.1| Rbm45 protein [Mus musculus]
gi|148695258|gb|EDL27205.1| mCG68005 [Mus musculus]
Length = 476
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 69/84 (82%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K +E LR+ FSPFG+IQ+I V+D++T ESKGVA+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKHTSELVLRERFSPFGDIQDIWVVRDKHTKESKGVAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L P+ +KPIKV IA
Sbjct: 81 RAMEEMHGQCLGPSDTKPIKVFIA 104
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 74/185 (40%), Gaps = 52/185 (28%)
Query: 117 VQYTSPQSAAYARDKFHGFAYPPGIPMVV--VPDFS--YGLPRNGASALGGNAALSVVDS 172
VQY + SA YA+ K HGF YPPG +VV + D S L R A+ + S+V S
Sbjct: 291 VQYFNVASAIYAKYKLHGFQYPPGNRIVVSFLDDGSNMTELIRKMATQMVAAQLASMVWS 350
Query: 173 KGALQSLTK----ALAQATSLLRSAGLST-------DSRFISRL---------------- 205
+ Q + A +QA + L + ++ RL
Sbjct: 351 TTSQQQFLQYGGNAASQAPQIQTDVVLPSCKKKAPPETPVKERLFVVFNPHPLPLDVLED 410
Query: 206 ---RLDDFIYYILV-----------------EFSQTLHGAEMYGSRLKVMEADPPKGDRN 245
R + I LV E TLHG + G RLKVM AD P+ + +
Sbjct: 411 IFCRFGNLIEVYLVSGKNVGYVKYADRKSANEAITTLHGKILNGVRLKVMLADSPR-EES 469
Query: 246 RKRQR 250
+KRQR
Sbjct: 470 KKRQR 474
>gi|410968924|ref|XP_003990949.1| PREDICTED: RNA-binding protein 45 [Felis catus]
Length = 474
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGEIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN +KPIKV IA
Sbjct: 81 RAMEEMHGQCLSPNDTKPIKVFIA 104
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|74183839|dbj|BAE24499.1| unnamed protein product [Mus musculus]
Length = 426
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 69/84 (82%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K +E LR+ FSPFG+IQ+I V+D++T ESKGVA+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKHTSELVLRERFSPFGDIQDIWVVRDKHTKESKGVAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L P+ +KPIKV IA
Sbjct: 81 RAMEEMHGQCLGPSDTKPIKVFIA 104
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
Score = 36.6 bits (83), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 20/29 (68%)
Query: 117 VQYTSPQSAAYARDKFHGFAYPPGIPMVV 145
VQY + SA YA+ K HGF YPPG +VV
Sbjct: 291 VQYFNVASAIYAKYKLHGFQYPPGNRIVV 319
>gi|301612449|ref|XP_002935727.1| PREDICTED: RNA-binding protein 45 isoform 2 [Xenopus (Silurana)
tropicalis]
Length = 475
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 66/83 (79%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
++PP+SR+F++ K VTED +R+ FS FG+IQ+I VKD+ T ESKG+A+++++K+S+A
Sbjct: 15 EDPPNSRVFLVVSKYVTEDLIRERFSDFGDIQDIWVVKDKQTKESKGIAFVKYAKSSQAC 74
Query: 78 KAVEEMNGEFLPNHSKPIKVLIA 100
KA+EEM+G L +KPIKV IA
Sbjct: 75 KAMEEMHGRCLSESTKPIKVFIA 97
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+D++Q F +G I+ +K++NTGESKG+AY+RF K S+AA A+E
Sbjct: 114 TRIFVMIPKSYTEEDVKQKFKEYGQIEYCSIIKNKNTGESKGLAYVRFLKPSQAALAIEN 173
Query: 83 MNGEF 87
+ F
Sbjct: 174 CDRSF 178
>gi|301612447|ref|XP_002935726.1| PREDICTED: RNA-binding protein 45 isoform 1 [Xenopus (Silurana)
tropicalis]
Length = 459
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 66/83 (79%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
++PP+SR+F++ K VTED +R+ FS FG+IQ+I VKD+ T ESKG+A+++++K+S+A
Sbjct: 15 EDPPNSRVFLVVSKYVTEDLIRERFSDFGDIQDIWVVKDKQTKESKGIAFVKYAKSSQAC 74
Query: 78 KAVEEMNGEFLPNHSKPIKVLIA 100
KA+EEM+G L +KPIKV IA
Sbjct: 75 KAMEEMHGRCLSESTKPIKVFIA 97
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+D++Q F +G I+ +K++NTGESKG+AY+RF K S+AA A+E
Sbjct: 114 TRIFVMIPKSYTEEDVKQKFKEYGQIEYCSIIKNKNTGESKGLAYVRFLKPSQAALAIEN 173
Query: 83 MNGEF 87
+ F
Sbjct: 174 CDRSF 178
>gi|26354795|dbj|BAC41024.1| unnamed protein product [Mus musculus]
Length = 436
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 69/84 (82%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K +E LR+ FSPFG+IQ+I V+D++T ESKGVA+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKHTSELVLRERFSPFGDIQDIWVVRDKHTKESKGVAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L P+ +KPIKV IA
Sbjct: 81 RAMEEMHGQCLGPSDTKPIKVFIA 104
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
SR+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 SRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 20/29 (68%)
Query: 117 VQYTSPQSAAYARDKFHGFAYPPGIPMVV 145
VQY + SA YA+ K HGF YPPG +VV
Sbjct: 291 VQYFNVASAIYAKYKLHGFQYPPGNRIVV 319
>gi|395837211|ref|XP_003791534.1| PREDICTED: RNA-binding protein 45 [Otolemur garnettii]
Length = 474
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SRLF++ K E LR+ FSPFG IQ+I V+D++T E+KG+A+++F+++S+A
Sbjct: 21 DEPPNSRLFLVISKYTPESVLRERFSPFGEIQDIWVVRDKHTKEAKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN +KPIKV IA
Sbjct: 81 RAMEEMHGQCLSPNDTKPIKVYIA 104
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 45/65 (69%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F+ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVTIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 18/24 (75%)
Query: 117 VQYTSPQSAAYARDKFHGFAYPPG 140
VQY + SA YA+ KFHGF YPPG
Sbjct: 289 VQYFNVASAIYAKYKFHGFQYPPG 312
>gi|195539519|ref|NP_001124225.1| RNA-binding protein 45 [Bos taurus]
gi|158455010|gb|AAI05263.2| RBM45 protein [Bos taurus]
gi|296490712|tpg|DAA32825.1| TPA: RNA binding motif protein 45 [Bos taurus]
Length = 474
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K +E LR+ FSPFG IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTSESVLRERFSPFGEIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L P+ +KPIKV IA
Sbjct: 81 RAMEEMHGQCLTPSDTKPIKVFIA 104
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F FG+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVFGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MN 84
+
Sbjct: 181 CD 182
>gi|431894949|gb|ELK04742.1| RNA-binding protein 45 [Pteropus alecto]
Length = 474
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGEIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G L PN +KPIKV IA
Sbjct: 81 RAMEEMHGRCLGPNDTKPIKVFIA 104
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|417401553|gb|JAA47659.1| Putative rna-binding protein elav/hu rrm superfamily [Desmodus
rotundus]
Length = 474
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGEIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G L PN +KPIKV IA
Sbjct: 81 RAMEEMHGRCLGPNDTKPIKVFIA 104
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|126326367|ref|XP_001368766.1| PREDICTED: RNA-binding protein 45 [Monodelphis domestica]
Length = 474
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGEIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L P+ SKPIKV IA
Sbjct: 81 RAMEEMHGQCLSPSDSKPIKVFIA 104
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 45/65 (69%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR F +G+I+ +K++ TGES+G+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLRDKFKVYGDIEYCSIIKNKATGESRGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|417399025|gb|JAA46545.1| Putative rna-binding protein elav/hu rrm superfamily [Desmodus
rotundus]
Length = 328
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGEIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G L PN +KPIKV IA
Sbjct: 81 RAMEEMHGRCLGPNDTKPIKVFIA 104
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|71895175|ref|NP_001026423.1| RNA-binding protein 45 [Gallus gallus]
gi|53132019|emb|CAG31865.1| hypothetical protein RCJMB04_12j16 [Gallus gallus]
Length = 502
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 67/88 (76%)
Query: 13 SREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
S E DEPP+SR+F++ GKD E +R+ F+PFG+IQ I ++D+ T ES+G+A+I+F++
Sbjct: 44 SAECLDEPPNSRVFVVLGKDAGEALIRERFAPFGDIQNIWLLRDKRTNESRGIAFIKFAR 103
Query: 73 TSEAAKAVEEMNGEFLPNHSKPIKVLIA 100
+S+A +A+EEM+G L +KPIKV IA
Sbjct: 104 SSQACRAMEEMHGRSLVPDTKPIKVFIA 131
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 45/62 (72%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+ + K S+AA+A+EE
Sbjct: 148 TRIFVMIPKTYTEEDLREKFKMYGDIEYCSIIKNKTTGESKGLGYVMYLKPSQAARAIEE 207
Query: 83 MN 84
+
Sbjct: 208 CD 209
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 117 VQYTSPQSAAYARDKFHGFAYPPGIPMVVV 146
+QY++ SA YA+ K HGF YPPG + V+
Sbjct: 312 IQYSTAASAIYAKYKLHGFEYPPGNRLTVI 341
>gi|47224740|emb|CAG00334.1| unnamed protein product [Tetraodon nigroviridis]
Length = 413
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 65/83 (78%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
D+PP+SRLFI+ + ++ED+LR FS FG+IQ + VKD+ T E KG++Y++F+++S+A
Sbjct: 5 DDPPNSRLFIVTSRSISEDELRDTFSIFGDIQGVWIVKDKQTKEPKGISYVKFARSSQAC 64
Query: 78 KAVEEMNGEFLPNHSKPIKVLIA 100
A+EEM+G+ + +KPIKVLIA
Sbjct: 65 LAMEEMHGKVISEGTKPIKVLIA 87
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 7/116 (6%)
Query: 12 RSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
R R+ DE +R+F+ K +E+DL++ F +G+I+ +K++ TGESKG+ Y+R+
Sbjct: 94 RHRDVEDEE-LTRIFVTIPKSYSEEDLKETFKEYGDIEYCVILKNKTTGESKGLGYVRYY 152
Query: 72 KTSEAAKAVEEMNGEFLPNHSKPIKVLIAAKLEFKEG-----YRGGQKISVQYTSP 122
K S+AA A+E + + ++P + AA ++ G Y GG + QY P
Sbjct: 153 KPSQAALAIENCDKTYRAILAEP-RNKAAATEDYSAGSSRNDYMGGAEPMNQYALP 207
>gi|410900730|ref|XP_003963849.1| PREDICTED: RNA-binding protein 45-like [Takifugu rubripes]
Length = 464
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 65/83 (78%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
D+PP+SRLF++ + ++ED+LR FS FG+IQ + VKD+ T E KG++Y++F+++S+A
Sbjct: 13 DDPPNSRLFVVTSRSISEDELRDTFSIFGDIQGVWVVKDKQTKEPKGISYVKFARSSQAC 72
Query: 78 KAVEEMNGEFLPNHSKPIKVLIA 100
A+EEM+G+ + +KPIKVLIA
Sbjct: 73 LAMEEMHGKVISEGTKPIKVLIA 95
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 7/116 (6%)
Query: 12 RSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
R R+ DE +R+F+ K TE+DL++ F +G+I+ +K++ TGESKG+ Y+R+
Sbjct: 102 RHRDVEDEE-LTRIFVTIPKSYTEEDLKETFKEYGDIEYCVILKNKATGESKGLGYVRYY 160
Query: 72 KTSEAAKAVEEMNGEFLPNHSKPIKVLIAAKLEFKEG-----YRGGQKISVQYTSP 122
K S+A+ A+E + + ++P + A ++ G Y GG + QY P
Sbjct: 161 KPSQASLAIENCDKTYRAILAEP-RNKATANEDYPAGSSRNDYMGGAEQMNQYALP 215
>gi|440901905|gb|ELR52766.1| RNA-binding protein 45, partial [Bos grunniens mutus]
Length = 509
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP SR+F++ K +E LR+ FSPFG IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 56 DEPPTSRIFLVISKYTSESVLRERFSPFGEIQDIWVVRDKHTKESKGIAFVKFARSSQAC 115
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L P+ +KPIKV IA
Sbjct: 116 RAMEEMHGQCLTPSDTKPIKVFIA 139
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F FG+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 156 TRIFVMIPKSYTEEDLREKFKVFGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 215
Query: 83 MN 84
+
Sbjct: 216 CD 217
>gi|432107294|gb|ELK32708.1| RNA-binding protein 45 [Myotis davidii]
Length = 474
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG IQ+I V+D++T ESKG+A+I+F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGEIQDIWVVRDKHTKESKGIAFIKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G L P +KPIKVLIA
Sbjct: 81 RAMEEMHGRCLGPYDTKPIKVLIA 104
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 121 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKMTGESKGLGYVRYLKPSQAAQAIEN 180
Query: 83 MNGEF 87
+ F
Sbjct: 181 CDRSF 185
>gi|119631449|gb|EAX11044.1| developmentally regulated RNA-binding protein 1, isoform CRA_a
[Homo sapiens]
Length = 617
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 67/83 (80%), Gaps = 1/83 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG+IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLI 99
+A+EEM+G+ L PN +KPIKV +
Sbjct: 81 RAMEEMHGQCLGPNDTKPIKVRV 103
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 264 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 323
Query: 83 MNGEF 87
+ F
Sbjct: 324 CDRSF 328
>gi|119631450|gb|EAX11045.1| developmentally regulated RNA-binding protein 1, isoform CRA_b
[Homo sapiens]
Length = 554
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 67/83 (80%), Gaps = 1/83 (1%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG+IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQAC 80
Query: 78 KAVEEMNGEFL-PNHSKPIKVLI 99
+A+EEM+G+ L PN +KPIKV +
Sbjct: 81 RAMEEMHGQCLGPNDTKPIKVRV 103
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 16/133 (12%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 264 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 323
Query: 83 MNGEFLPNHSKPI-KVLIAAKLEFKEGYRG--------------GQKISVQYTSPQSAAY 127
+ F ++P K +++ ++ R G + VQY + SA Y
Sbjct: 324 CDRSFRAILAEPKNKASESSEQDYYSNMRQEALGHEPRVNMFPFGHGV-VQYFNVASAIY 382
Query: 128 ARDKFHGFAYPPG 140
A+ K HGF YPPG
Sbjct: 383 AKYKLHGFQYPPG 395
>gi|148238299|ref|NP_001080090.1| RNA binding motif protein 45 [Xenopus laevis]
gi|27924225|gb|AAH45039.1| Drbp1-pending-prov protein [Xenopus laevis]
Length = 476
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 65/83 (78%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
++PP+SR+F++ K TED +R+ FS FG+IQ+I VKD+ T ESKG+A+++++K+S+A
Sbjct: 15 EDPPNSRVFLVVSKYATEDLIRERFSDFGDIQDIWVVKDKQTKESKGIAFVKYAKSSQAC 74
Query: 78 KAVEEMNGEFLPNHSKPIKVLIA 100
+A+EEM+G L +KPIKV IA
Sbjct: 75 RAMEEMHGRCLSESTKPIKVFIA 97
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+D++Q F +G I+ +K++NTGESKG+AY+RF K S+AA A+E
Sbjct: 114 TRIFVMIPKSYTEEDVKQKFKEYGQIEYCSIIKNKNTGESKGLAYVRFLKPSQAALAIEN 173
Query: 83 MNGEF 87
+ F
Sbjct: 174 CDRSF 178
>gi|158284492|ref|XP_307184.4| Anopheles gambiae str. PEST AGAP012503-PA [Anopheles gambiae str.
PEST]
gi|157021032|gb|EAA02991.4| AGAP012503-PA [Anopheles gambiae str. PEST]
Length = 417
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
Query: 3 RNYRINTHDRSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+ ++ +R++E ++EPP SRLF++CGK +T++ L + F P G I+E + DR TG+
Sbjct: 5 RDNTMSDVNRAKEISEEPPMSRLFVICGKQITKEQLIKHFEPDGTIEECVVITDRKTGQG 64
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIAA 101
KGVAY++F+KTS AA+ + + NG + ++PIKV+I+A
Sbjct: 65 KGVAYVKFTKTSSAARGLRK-NGTVVEGDTRPIKVMISA 102
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 24 RLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
RLF + + TE+ L++ F G + ++R V D+ + + AYI+F E A A+E
Sbjct: 123 RLFAIVPSNRTEEQLKEEFGTHGTVTQVRLVPDKK-NDKQCAAYIKFPTFLETALAIENC 181
Query: 84 NGEFLPNHSKP 94
N ++ P
Sbjct: 182 NPQYKAKFCVP 192
>gi|118777478|ref|XP_308094.3| AGAP011041-PA [Anopheles gambiae str. PEST]
gi|116132732|gb|EAA03849.3| AGAP011041-PA [Anopheles gambiae str. PEST]
Length = 182
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Query: 11 DRSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRF 70
+R++E ++EPP SRLF++CGK +T++ L + F P G I+E + DR TG+ KGVAY++F
Sbjct: 5 NRAKEISEEPPMSRLFVICGKQITKEQLIKHFEPDGTIEECVVITDRKTGQGKGVAYVKF 64
Query: 71 SKTSEAAKAVEEMNGEFLPNHSKPIKVLIAA 101
+KTS AA+ + + NG + ++PIKV+I+A
Sbjct: 65 TKTSSAARGLRK-NGTVVEGDTRPIKVMISA 94
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 24 RLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
RLF + + TE+ L++ F G + ++R V D+ + + AYI+F E A A+E
Sbjct: 115 RLFAIVPSNRTEEQLKEEFGTHGTVTQVRLVPDKK-NDKQCAAYIKFPTFLETALAIENC 173
Query: 84 NGEF 87
N ++
Sbjct: 174 NPQY 177
>gi|115714719|ref|XP_785181.2| PREDICTED: RNA-binding protein 45-like [Strongylocentrotus
purpuratus]
Length = 507
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 64/83 (77%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
D+PP+SRLFI+C K TE DL+ F FG ++++ VKD+ T E KGVAY++F+K S+AA
Sbjct: 23 DKPPNSRLFIICSKLQTESDLKDYFGQFGEVEDVFLVKDKVTREPKGVAYVKFAKFSQAA 82
Query: 78 KAVEEMNGEFLPNHSKPIKVLIA 100
+A+EE +G+ + N SKPIKV+IA
Sbjct: 83 RAMEESDGKRVMNMSKPIKVIIA 105
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%)
Query: 13 SREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
S++ +++ +RLF++ +D+L + F +G I + + D+ TG +KG Y++F +
Sbjct: 113 SKDIDEKTELTRLFVVVPSSYDDDELYKKFDEYGEIDHVTIITDKKTGANKGFGYVKFRR 172
Query: 73 TSEAAKAVEEMNGEFLPNHSKP 94
S AA A+E + F ++P
Sbjct: 173 VSGAANALENCDRSFKAVMAEP 194
>gi|443708634|gb|ELU03679.1| hypothetical protein CAPTEDRAFT_33898, partial [Capitella teleta]
Length = 445
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 59/84 (70%)
Query: 17 NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
N E +RLFIL GK TE+ R+ F +G +++I V+DRN+ E KG+ YI FSK SEA
Sbjct: 3 NQEETFNRLFILGGKGTTEEVWRETFEQYGQVKDIWIVRDRNSSEEKGICYITFSKASEA 62
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
A A+EEMNG L N+ KP+KVL+A
Sbjct: 63 ALAIEEMNGRCLANNPKPLKVLLA 86
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 48/74 (64%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
R+ +E R+FI+ K T+DD+R F +G+I +R +KD ++ +SKG+A++++ +
Sbjct: 95 RDPKEEEKMLRIFIMVPKHFTDDDVRASFKGYGDIHYVRLLKDPHSSKSKGLAFVKYYRA 154
Query: 74 SEAAKAVEEMNGEF 87
AAKA+EE + F
Sbjct: 155 YHAAKALEECDASF 168
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 20/83 (24%)
Query: 115 ISVQYTSPQSAAYARDKFHGFAYPPGIPMVVVPDFSYGLPRNGASALGGNAALSVVDSKG 174
+ V ++S AAYA+DK GF YPPG P+ + A S D
Sbjct: 272 VLVDFSSAACAAYAKDKLQGFEYPPGFPL--------------------SEAYSCDDLNE 311
Query: 175 ALQSLTKALAQATSLLRSAGLST 197
L QATS+++ AGLS
Sbjct: 312 PYDPNDLVLLQATSIIQQAGLSN 334
>gi|157132547|ref|XP_001656064.1| developmentally regulated RNA-binding protein [Aedes aegypti]
gi|157132549|ref|XP_001656065.1| developmentally regulated RNA-binding protein [Aedes aegypti]
gi|108884359|gb|EAT48584.1| AAEL000385-PB [Aedes aegypti]
gi|108884360|gb|EAT48585.1| AAEL000385-PA [Aedes aegypti]
Length = 412
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 7 INTHDRSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVA 66
+ H RE ++EPP SRLF++CG+ VT++ L + F+ G I+E + D+ TG+ KGVA
Sbjct: 1 MQEHMGRREISEEPPMSRLFVICGRQVTKEQLMKHFADDGEIEECIVIVDKKTGQGKGVA 60
Query: 67 YIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIAAKLEFKE 107
Y++F+KTS AA+ + + NG ++ N ++PIKV+I+A + K+
Sbjct: 61 YVKFTKTSSAARGLRK-NGSYIENETRPIKVMISASYQKKK 100
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 4 NYRINTHDRSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESK 63
+Y+ D + E +E RLF + E+ ++ FS FG + ++R V D+ +S+
Sbjct: 95 SYQKKKEDGTPEEVNEYKFRRLFAVIPISKDEEAIKSEFSRFGTVIQVRLVPDKKN-QSQ 153
Query: 64 GVAYIRFSKTSEAAKAVE 81
AYI F+ E A A+E
Sbjct: 154 CAAYITFTSFLETALAIE 171
>gi|355750658|gb|EHH54985.1| hypothetical protein EGM_04104 [Macaca fascicularis]
Length = 475
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+ R+F++ K E LR+ FSPFG+IQ+I V+D++T ESKG+A+++F+++S+A
Sbjct: 21 DEPPN-RIFLVISKYTPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQAC 79
Query: 78 KAVEEMNGEFL-PNHSKPIKVLIA 100
+A+EEM+G+ L PN +KPIKV IA
Sbjct: 80 RAMEEMHGQCLGPNDTKPIKVFIA 103
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 120 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 179
Query: 83 MNGEF 87
+ F
Sbjct: 180 CDRSF 184
>gi|221102539|ref|XP_002163488.1| PREDICTED: RNA-binding protein 45-like [Hydra magnipapillata]
Length = 529
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Query: 17 NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+D+PP SR+F++C K T +DLR+ F FG ++++ VKD+ T E++GVAYI+FSK SEA
Sbjct: 89 HDKPPFSRVFVVCSKSHTGEDLRKTFEEFGTVEDVWVVKDKQTKENRGVAYIKFSKMSEA 148
Query: 77 AKAVEEMNGEFLPNH--SKPIKVLIA 100
AVE+M+G+ L + +KP+KV+IA
Sbjct: 149 CLAVEKMDGKKLSEYDDAKPLKVIIA 174
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%)
Query: 13 SREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
+ ++NDE +RLF++ K + E DL+ F FG I+ ++ VKDR TGE KG Y++F
Sbjct: 182 TEDFNDESALTRLFVVIPKGMDEKDLQDSFDKFGEIEYVQVVKDRKTGEKKGFGYVKFKH 241
Query: 73 TSEAAKAVEEMNGEFLPNHSKP 94
AA AVE + F ++P
Sbjct: 242 AYNAALAVESCDKTFRAVMAEP 263
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 77/179 (43%), Gaps = 35/179 (19%)
Query: 103 LEFKEGYRGGQKISVQ---YTSPQSAAYARDKFHGFAYPPGIPMVVVPDFSYGLPRNGA- 158
+ K Y G+ V Y S SA YA++K + F YPPG +VV Y +G
Sbjct: 354 CDLKRNYSTGESKGVAVIVYNSVGSAIYAKEKLNSFEYPPGSKLVV----RYAPDEDGQI 409
Query: 159 --SALGGNAALSVVDSKGALQSLTKALAQATSLLRSAGLSTD-------------SRF-- 201
SA N ++ + K ++ A S + SRF
Sbjct: 410 ELSAHQSNLQVNNIPYCTVPLPSAKPISDAESCAERLFIVCQPSPPPDHILKDIFSRFGD 469
Query: 202 ---ISRLRLDDFIY--YILVEFS----QTLHGAEMYGSRLKVMEADPPKGDRN-RKRQR 250
+ L+ +F Y Y +E + QTLHGAE+ G +LKV++A+PPK + RKR R
Sbjct: 470 LIDVFMLKNKNFGYAKYSSIESAEAAIQTLHGAEILGKKLKVLQAEPPKSNETARKRPR 528
>gi|390352507|ref|XP_001199679.2| PREDICTED: RNA-binding protein 45-like [Strongylocentrotus
purpuratus]
Length = 111
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 66/97 (68%)
Query: 2 DRNYRINTHDRSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGE 61
DRN + D+PP+SRLFI+C K TE DL+ F FG ++++ VKD+ T E
Sbjct: 7 DRNRSGRGQQGPQSSADKPPNSRLFIICSKLQTESDLKDYFGQFGEVEDVFLVKDKVTRE 66
Query: 62 SKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVL 98
KGVAY++F+K S+AA+A+EE +G+ + N SKPIKV+
Sbjct: 67 PKGVAYVKFAKFSQAARAMEESDGKRVMNMSKPIKVI 103
>gi|330822061|ref|XP_003291619.1| hypothetical protein DICPUDRAFT_8590 [Dictyostelium purpureum]
gi|325078184|gb|EGC31849.1| hypothetical protein DICPUDRAFT_8590 [Dictyostelium purpureum]
Length = 312
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 21 PHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
P SR+FILC K++TE++L + F FG I+ R V D+ T ESKG AYI++SKTS AA A+
Sbjct: 1 PFSRIFILCSKNLTENNLYESFKTFGTIESCRIVIDKETNESKGYAYIKYSKTSAAALAI 60
Query: 81 EEMNGEFLPNH--SKPIKVLIA 100
EEMNG+ L PIKVLIA
Sbjct: 61 EEMNGKILNADITKTPIKVLIA 82
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
D PP+SRLF++C K++TE++L F FGN++ ++ ++++++ ESKG A++++SK+S A
Sbjct: 99 DHPPNSRLFVVCNKNITEEELNNKFKDFGNLEHVKLIREKHSNESKGCAFVKYSKSSTAC 158
Query: 78 KAVEEMNGEF-LPN-HSKPIKVLIA 100
A+E +N E L N PIKV IA
Sbjct: 159 IAMETINEEEGLKNGEEHPIKVFIA 183
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 24 RLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
RLF++C K +++++L + FS + ++ KD+N G+SKG AY+ +S + A A E+
Sbjct: 236 RLFVVCHKSISQENLYRLFSRYPGMEYCDLKKDKNNGKSKGFAYVNYSTPAAALMAKNEL 295
Query: 84 NG-EFLPNHSKPIKVLIA 100
NG ++ P H+ +KV+ A
Sbjct: 296 NGIKYPPGHT--LKVVFA 311
>gi|170033905|ref|XP_001844816.1| developmentally regulated RNA-binding protein [Culex
quinquefasciatus]
gi|167875061|gb|EDS38444.1| developmentally regulated RNA-binding protein [Culex
quinquefasciatus]
Length = 437
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
+E ++EPP SRLF++CG+++T D L + F G I+E + D+ TG+ KGVAY++F++T
Sbjct: 11 KEISEEPPMSRLFVICGRNITRDQLVRHFEDDGEIEECVVIVDKKTGQGKGVAYVKFTQT 70
Query: 74 SEAAKAVEEMNGEFLPNHSKPIKVLIAAKLEFKE 107
S AA+ + + NG ++ N ++PIKV+I+A + K+
Sbjct: 71 SAAARGLRK-NGSYIENETRPIKVMISASYQKKK 103
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 4 NYRINTHDRSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESK 63
+Y+ D S E +E RLF + TEDD+R FS FGN+ +IR V D+ +S+
Sbjct: 98 SYQKKKEDGSPEEVNEFKFRRLFAVLPISKTEDDIRDEFSQFGNVTQIRLVPDKKN-QSQ 156
Query: 64 GVAYIRFSKTSEAAKAVE 81
AYI FS EAA A+E
Sbjct: 157 CAAYITFSSFLEAALAIE 174
>gi|312371592|gb|EFR19733.1| hypothetical protein AND_21889 [Anopheles darlingi]
Length = 365
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
Query: 8 NTHDRSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY 67
N R++E +EPP SRLFI+CGK +T+D L + F G I+E + DR TG KGVAY
Sbjct: 4 NGGGRTKEICEEPPMSRLFIICGKHITKDQLIKHFESDGTIEECVVITDRRTGRGKGVAY 63
Query: 68 IRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIAA 101
++F+KTS AA+ + + N + ++PIKV+I+A
Sbjct: 64 VKFTKTSSAARGLRK-NATIIDGDTRPIKVMISA 96
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 94/256 (36%), Gaps = 41/256 (16%)
Query: 24 RLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
RLF + TED LR+ FSP+G + ++R V D+ + + AYI+F+ E A A+E
Sbjct: 117 RLFAIVPSSRTEDQLREEFSPYGTVTQVRLVPDKKN-DKQCAAYIKFASFLETATAIEGC 175
Query: 84 NGEFLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPGIPM 143
N ++ P + E G GG ++ Q +S + R G + +
Sbjct: 176 NPQYKAKFCIPRS---NVQQERDNGKPGGHEVGEQVNRKRSHSPERTVARGGGDSKLVVI 232
Query: 144 V--------------VVPDFSYGLPRNGASALGGNAALSVVDSKGALQSLTKALAQATSL 189
+ P Y + + NA + K + L + +A +
Sbjct: 233 CSNQLNQDRIWRLFDICPGMKY------CTIMSANALAQLGPPKPLVSELVACVKKAFFI 286
Query: 190 LRSAGLSTDSRFISRLRLDDFIYYILV--------EFS---------QTLHGAEMYGSRL 232
+S + R D I LV EF+ Q LHG + L
Sbjct: 287 CMPEAISVKLLTDAFCRFGDLIKVYLVPGKRHGYAEFASDVAAHRAIQQLHGMHLGDCWL 346
Query: 233 KVMEADPPKGDRNRKR 248
KV+E G+ R +
Sbjct: 347 KVLECAEYAGEHKRNK 362
>gi|281212109|gb|EFA86270.1| hypothetical protein PPL_00832 [Polysphondylium pallidum PN500]
Length = 480
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 21 PHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
P SR+FI+CGKD++E L + F FG I+ + V D+ T ESKG+AYI++ K S AA A+
Sbjct: 140 PLSRIFIICGKDISEAQLTKVFKKFGTIESCKLVIDKETNESKGLAYIKYQKASSAALAI 199
Query: 81 EEMNGEFLP-NHSKPIKVLIA 100
E MNG +P N S P+KV+IA
Sbjct: 200 ESMNGTTIPENESTPLKVMIA 220
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 53/72 (73%)
Query: 13 SREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
S + D PP+SRLF++C KD +E DL F FGN++ ++ V++R+T ESKG A+++FSK
Sbjct: 232 STDPEDFPPNSRLFVICRKDTSEADLTNRFKQFGNLEHVKIVRERDTNESKGCAFVKFSK 291
Query: 73 TSEAAKAVEEMN 84
+S AA A+E +N
Sbjct: 292 SSTAALAMESIN 303
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 24 RLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
RLF++C K VT++ L + FS + ++ KD+ + +SKG AY+ +S A A E+
Sbjct: 361 RLFVVCHKSVTQEGLYKLFSRYPGMEYCDLKKDKVSNKSKGFAYVNYSTPQAALLAKNEL 420
Query: 84 NG-EFLPNHSKPIKVLIAAKLEFKEG 108
NG ++ P +S +KV+ A L K+
Sbjct: 421 NGIKYPPGYS--LKVVFAEPLGIKQN 444
>gi|66805067|ref|XP_636266.1| hypothetical protein DDB_G0289337 [Dictyostelium discoideum AX4]
gi|60464621|gb|EAL62755.1| hypothetical protein DDB_G0289337 [Dictyostelium discoideum AX4]
Length = 1528
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
Query: 21 PHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
P+SR+FI+C K +TE +L F +G+I+ R V D++T ESKG AYI+++KTS AA A+
Sbjct: 765 PYSRIFIICNKSITEKNLEDCFKVYGSIESCRIVIDKDTNESKGYAYIKYTKTSSAALAI 824
Query: 81 EEMNGEFLPNHS--KPIKVLIA 100
EEMNG+ L S PI+VLIA
Sbjct: 825 EEMNGKILEMDSSCSPIRVLIA 846
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 59/87 (67%), Gaps = 9/87 (10%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
D PP+SRLF++C K +TE +L+ F FGN++ +R +++++T +SKG A+I+FSK S AA
Sbjct: 863 DHPPNSRLFVVCNKSLTEQELKNKFKEFGNLENVRLIREKSTNDSKGCAFIKFSKASTAA 922
Query: 78 KAVEEMN----GEFLPNHSKPIKVLIA 100
A+E +N GE P+KV IA
Sbjct: 923 IAMESINISNTGE-----EYPLKVFIA 944
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 24 RLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
RLF++C K +++++L + FS + ++ KD+NTG+SKG AY+ +S A A ++
Sbjct: 1259 RLFVVCHKSISQENLYRLFSRYPGMEYCDLKKDKNTGKSKGFAYVNYSSPQAALLAKNDL 1318
Query: 84 NGEFLPNHSKPIKVLIAAKLEFKE 107
NG P S +KV+ A L K+
Sbjct: 1319 NGIKYPT-SHTLKVVFAEPLGIKQ 1341
>gi|426220800|ref|XP_004004600.1| PREDICTED: RNA-binding protein 45 [Ovis aries]
Length = 469
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
SR+F++ K +E LR+ FSPFG IQ+I V+D++T ESKG+A+++F+++S+A +A+EE
Sbjct: 21 SRIFLVISKYTSESVLRERFSPFGEIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEE 80
Query: 83 MNGEFL-PNHSKPIKVLIA 100
M+G+ L P+ +KPIKV IA
Sbjct: 81 MHGQCLTPSDTKPIKVFIA 99
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
R+ DE +R+F++ K TE+DLR+ F FG+I+ +K++ TGESKG+ Y+R+ K
Sbjct: 108 RDVEDEE-LTRIFVMIPKSYTEEDLREKFKVFGDIEYCSIIKNKVTGESKGLGYVRYLKP 166
Query: 74 SEAAKAVEEMN 84
S+AA+A+E +
Sbjct: 167 SQAAQAIENCD 177
>gi|351714400|gb|EHB17319.1| RNA-binding protein 45, partial [Heterocephalus glaber]
Length = 449
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
SR+F++ K E L + FSPFG IQ+I V+D++T ESKG+A+I+F+++S+A +A+EE
Sbjct: 1 SRIFLVISKYTPEAVLWERFSPFGEIQDIWVVRDKHTKESKGIAFIKFARSSQACRAMEE 60
Query: 83 MNGEFL-PNHSKPIKVLIA 100
M+G+ L PN++KPIKV IA
Sbjct: 61 MHGQCLEPNNTKPIKVFIA 79
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 96 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 155
Query: 83 MNGEF 87
+ F
Sbjct: 156 CDRSF 160
>gi|156392152|ref|XP_001635913.1| predicted protein [Nematostella vectensis]
gi|156223011|gb|EDO43850.1| predicted protein [Nematostella vectensis]
Length = 424
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
D PP SR+FI+C K +D+R F +G I+++ VKD+ T E++GV Y++F K S AA
Sbjct: 13 DNPPFSRVFIVCSKRHNAEDIRSAFEQYGTIEDVWVVKDKATKENRGVCYVKFVKASSAA 72
Query: 78 KAVEEMNGEFLPNHSKPIKVLIA 100
A EEM+G + + KPIK +IA
Sbjct: 73 LACEEMDGRQIGDDPKPIKAMIA 95
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 47/70 (67%)
Query: 15 EYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTS 74
++ D+ +RLF++C KD ++DLR F FG+I+ ++ V+D T E+KG Y++F K+S
Sbjct: 105 DFQDQTTMTRLFVICPKDFNDEDLRSKFESFGDIEYVQIVRDHKTRENKGYGYVKFHKSS 164
Query: 75 EAAKAVEEMN 84
AA A+E +
Sbjct: 165 TAAMALENCD 174
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 91/246 (36%), Gaps = 76/246 (30%)
Query: 24 RLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
RLF++ VT++ + + F +Q ++ NTGESKG AY
Sbjct: 235 RLFVIISTAVTQEQVVRLFDIIPGMQVCDLKRNYNTGESKGFAY---------------- 278
Query: 84 NGEFLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPGIPM 143
V Y S SA YA++K +GF YPPG +
Sbjct: 279 ---------------------------------VTYNSVGSAIYAKEKLNGFEYPPGNKL 305
Query: 144 VV---------VPDFSYGLPRNGASALGGNAALS-----VVDSKGALQSLTKALAQATSL 189
VV P ++ A NA ++ V + + K +
Sbjct: 306 VVNMAGFSIDGSPVYTTAALPAPAPLADQNADVASRLFIVCNPAPPPDHVLKDVFSRFGN 365
Query: 190 LRSAGLSTD-----SRFISRLRLDDFIYYILVEFSQTLHGAEMYGSRLKVMEADPPKGDR 244
L + + ++F ++ D I Q LHG ++ G +LKVM ADPP+ +
Sbjct: 366 LIDVWMMKERNFGYAKFAAKQSADAAI--------QGLHGHDVLGMKLKVMLADPPRNES 417
Query: 245 NRKRQR 250
+RKR R
Sbjct: 418 SRKRPR 423
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 23 SRLFILCGKDVTEDD-LRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
SRLFI+C D L+ FS FGN+ ++ +K+RN G Y +F+ A A++
Sbjct: 340 SRLFIVCNPAPPPDHVLKDVFSRFGNLIDVWMMKERNFG------YAKFAAKQSADAAIQ 393
Query: 82 EMNGE 86
++G
Sbjct: 394 GLHGH 398
>gi|328872428|gb|EGG20795.1| hypothetical protein DFA_00660 [Dictyostelium fasciculatum]
Length = 458
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 60/83 (72%), Gaps = 4/83 (4%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
D PP+SRLF++C KDV+E DL F FGN++ ++ V++R+T ESKG A+++FSK+S AA
Sbjct: 215 DSPPNSRLFVICKKDVSEADLTNRFKEFGNLEHVKIVRERDTHESKGYAFVKFSKSSTAA 274
Query: 78 KAVEEMNGEFLPNHSKPIKVLIA 100
A+E +N + K +K++IA
Sbjct: 275 LAMETINE----SDDKSLKIIIA 293
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 21 PHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
P SR+F++CGKDVTE+ L F PFG EI+ V D++T ESKG AYI++ K S AA A+
Sbjct: 84 PFSRIFVICGKDVTENQLAVAFQPFGTT-EIKIVVDKDTRESKGYAYIKYQKASSAALAI 142
Query: 81 EEMNGEFL 88
E+MNG L
Sbjct: 143 EKMNGTIL 150
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 24 RLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
RLF++C K VT+++L + FS + ++ KD+ T +SKG AY+ +S A A E+
Sbjct: 340 RLFVVCHKSVTQENLYKLFSRYPGMEYCDLKKDKTTNKSKGFAYVNYSTPQAALLAKNEL 399
Query: 84 NGEFLPNHSKPIKVLIAAKLEFKEG 108
NG P+ +KV+ A L K+
Sbjct: 400 NGIKYPS-GYSLKVVFAEPLGIKQA 423
>gi|340368182|ref|XP_003382631.1| PREDICTED: RNA-binding protein 45-like [Amphimedon queenslandica]
Length = 541
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 63/85 (74%)
Query: 17 NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+D PP SR+F++C K + E+++++ F+ FG I++I VKDR T E+KG+ Y++F + S A
Sbjct: 62 HDSPPFSRVFVVCSKGMKEEEVQEAFAVFGPIEDIWMVKDRMTKENKGICYVKFERASSA 121
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAA 101
A ++E ++G+ + + KPIKV+IA+
Sbjct: 122 AASIEALDGKVIGSDPKPIKVMIAS 146
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 48/73 (65%)
Query: 15 EYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTS 74
+YNDE +RLF++C K+ +E DL+ F FG+ ++D++TGE+KG Y++F++ S
Sbjct: 155 DYNDESARTRLFVVCPKEYSEQDLKAKFEHFGDFDFCNIIRDKHTGENKGFGYVKFTRAS 214
Query: 75 EAAKAVEEMNGEF 87
AA A+E + F
Sbjct: 215 TAAVAMENCDKAF 227
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 56/253 (22%)
Query: 22 HSRLFILCGKDVTEDDLRQGFS--PFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
++RL+++ V E+ L + F P + +++C + TGES+G AYI ++ + A A
Sbjct: 297 NNRLYVIVSPAVQEEQLTRLFDIIPGLDYCDLKC--NHTTGESRGFAYITYNTINAAMYA 354
Query: 80 VEEMNGEFLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPP 139
E++NG P K L+ E +++Y P + +H PP
Sbjct: 355 KEKLNGFEYPPGCK----LVVKYAE--------DPPNIRYGPPSPTFESSYHYHS---PP 399
Query: 140 GIPM-----VVVPDFSYGLPRNGASALGGNAALSVVDSKGALQSLTKALAQATSLLRSA- 193
PM V P G PR ++LG + G + + + +LRS
Sbjct: 400 HSPMRSPVRSVSPVRPLGFPRQRRNSLGS-------EHDGRVFFVCNPSPPSDQVLRSVF 452
Query: 194 ---GLSTD-----------SRFISRLRLDDFIYYILVEFSQTLHGAEMYGSRLKVMEADP 239
G+ TD ++F++R + I LHG E++G +LKVM ADP
Sbjct: 453 GRFGVLTDIWVIRGKNYGYAKFVTRQAAESAI--------TALHGMEVFGVKLKVMLADP 504
Query: 240 P--KGDRNRKRQR 250
P +G KRQ+
Sbjct: 505 PPEEGGLRNKRQK 517
>gi|159471882|ref|XP_001694085.1| predicted protein [Chlamydomonas reinhardtii]
gi|158277252|gb|EDP03021.1| predicted protein [Chlamydomonas reinhardtii]
Length = 183
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 56/84 (66%), Gaps = 7/84 (8%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
D PP SRLFI+CGK+V + L+ F PFGN+Q ++ +++ KGVAY+++ K S AA
Sbjct: 5 DSPPGSRLFIVCGKNVEAETLQVAFRPFGNVQNVKVIRE------KGVAYVKYDKASSAA 58
Query: 78 KAVEEMNGEFLPNHSKP-IKVLIA 100
A+E +NG L N P +KVL+A
Sbjct: 59 LAMENLNGAVLNNGRGPKLKVLLA 82
>gi|302844343|ref|XP_002953712.1| hypothetical protein VOLCADRAFT_106063 [Volvox carteri f.
nagariensis]
gi|300261121|gb|EFJ45336.1| hypothetical protein VOLCADRAFT_106063 [Volvox carteri f.
nagariensis]
Length = 500
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 15 EYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTS 74
E D PP SRLFI+CGK+V + L+ F P+GN+Q ++ +++ KGVAY+++ K S
Sbjct: 2 ESVDAPPGSRLFIVCGKNVEAETLQGAFRPYGNVQNVKVIRE------KGVAYVKYDKAS 55
Query: 75 EAAKAVEEMNGEFLPNHSKP-IKVLIA 100
AA A+E +NG L N P +KVL+A
Sbjct: 56 SAALAMENLNGAVLNNGRGPKLKVLLA 82
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 7 INTHDRSREYNDEPPHS--RLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKG 64
++T+ + +D P S RLF++ K VT+D L + F F ++ KD TG SKG
Sbjct: 292 LHTNSTNVTPHDSPTLSKQRLFVVVHKSVTQDVLARLFRKFNGMEYCDLKKDPATGRSKG 351
Query: 65 VAYIRFSKTSEAAKAVEEMNG-EFLPNHSKPIKVLIAAKL 103
++ +S AA AV ++NG EF P+ ++ +KV+ A +L
Sbjct: 352 FCFVNYSTPEAAATAVAQLNGIEFPPHSNQRLKVMFAEQL 391
>gi|193636496|ref|XP_001945010.1| PREDICTED: RNA-binding protein 45-like [Acyrthosiphon pisum]
Length = 453
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 17 NDEPPHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTS 74
N++P +SR+F+L K+ ++E++ + F FG+++ I VKDRN+ KGVAYI++SK S
Sbjct: 8 NNDPENSRIFVLYDKNHPISENEFKDMFGNFGDVKNIYIVKDRNSDTVKGVAYIKYSKAS 67
Query: 75 EAAKAVEEMNGEFLPNHSKPIKVLIAA 101
EA KA+E MNG + + ++ +KVL+A
Sbjct: 68 EAFKAIEAMNGHRIESSNRRMKVLMAT 94
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 10 HDRSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIR 69
H RS N E ++RLF+ K E DL FS +G I ++ V +++TGESKG+A+I
Sbjct: 98 HIRS---NSEMEYNRLFVFVPKTDKESDLENIFSQYGEISKVHIVTNKDTGESKGIAFIT 154
Query: 70 FSKTSEAAKAVEEMNGEFLPNHSKP 94
+SK S AA A+EE + +KP
Sbjct: 155 YSKASSAALAIEECGPNYKAVFAKP 179
>gi|349806373|gb|AEQ18659.1| putative rna binding motif protein 45 [Hymenochirus curtipes]
Length = 175
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 46/59 (77%)
Query: 42 FSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIA 100
FS FG+IQ+I VKD++T ESKG+A++++SK+S A +A+EEM+G L +K IKV IA
Sbjct: 1 FSEFGDIQDIWVVKDKHTKESKGIAFVKYSKSSHACRAMEEMHGRCLNESTKSIKVFIA 59
>gi|303283532|ref|XP_003061057.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457408|gb|EEH54707.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 561
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 6/71 (8%)
Query: 13 SREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
S ++ PPHSRLF++CG+ V ED+L F+ G IQ R V E+KGVAY++F+
Sbjct: 296 SSHHDARPPHSRLFVVCGRGVREDELESFFAAHGEIQSARVV------EAKGVAYVKFAL 349
Query: 73 TSEAAKAVEEM 83
S AA+AVE +
Sbjct: 350 ASCAARAVETL 360
>gi|242022552|ref|XP_002431704.1| developmentally regulated RNA-binding protein, putative [Pediculus
humanus corporis]
gi|212517012|gb|EEB18966.1| developmentally regulated RNA-binding protein, putative [Pediculus
humanus corporis]
Length = 375
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 80/179 (44%), Gaps = 42/179 (23%)
Query: 109 YRGGQKISVQYTSPQSAAYARDKFHGFAYPPGIPMVVVPDFSYGLPR----------NGA 158
+R SV Y++PQ AAYARDK HGF YPPG M+V PD+S R
Sbjct: 204 FRAKAVSSVAYSTPQQAAYARDKIHGFEYPPGQHMIVRPDYSENTQRVQQIPPPISMPSF 263
Query: 159 SALGGN-------------AALSVVDSKG-----ALQSLTKALAQATSLLRSAGLSTDSR 200
S L N A L VV + G A++ + + T + G +
Sbjct: 264 SGLNSNNSNLSKADIELVEARLFVVFNPGIPERYAIKDVFGRFGKITDIFLLVGKNVG-- 321
Query: 201 FISRLRLDDFIYYILVEFSQTLHGAEMYGSRLKVMEADP------PKGDRNRKRQRLDD 253
+IS R + + + + LHG E+ G +KVMEA+P P DR RKR +L D
Sbjct: 322 YISYNRKE-----AVKDAIEALHGHELCGMYMKVMEAEPRRTPGGPDEDR-RKRLKLQD 374
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 24 RLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
RLF++C K T +D+ F FG+I I+ VK+R+T E+KG AY+++ K AA A E+
Sbjct: 32 RLFVVCKKTSTVEDIEAHFKEFGDIDNIKLVKNRDTNENKGFAYVKYYKMYHAALAYEQC 91
Query: 84 NGEFLPNHSKP 94
+ + P ++P
Sbjct: 92 DRSYKPKFAEP 102
>gi|326922683|ref|XP_003207576.1| PREDICTED: RNA-binding protein 45-like [Meleagris gallopavo]
Length = 381
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 47/65 (72%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+EE
Sbjct: 27 TRIFVMIPKTYTEEDLREKFKMYGDIEYCSIIKNKTTGESKGLGYVRYLKPSQAARAIEE 86
Query: 83 MNGEF 87
+ +
Sbjct: 87 CDRSY 91
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 64/190 (33%), Gaps = 57/190 (30%)
Query: 117 VQYTSPQSAAYARDKFHGFAYPPGIPMVVV----PDFSYGLPRNGASALGGNAALSVVDS 172
+QY++ SA YA+ K HGF YPPG + V+ + S L R A+ L SV+ +
Sbjct: 191 IQYSTAASAIYAKYKLHGFEYPPGNRLTVIFLEDGNDSSDLIRKMATQLVTAHMTSVLRN 250
Query: 173 KGA--------------------LQSLTKALAQATSLLRSAGLSTDSRFISRL------- 205
A LQ T AL S R
Sbjct: 251 NNAIVQQYRTPPQAFGGTSGSPLLQPQTDALLPPPKKKVPPDTSVKERLFILFHPHPLPV 310
Query: 206 --------RLDDFIYYILV-----------------EFSQTLHGAEMYGSRLKVMEADPP 240
R + I LV E LHG + G RLKV AD P
Sbjct: 311 TILEDVFCRFGNLIKVYLVAGKNVAYAKFADRASASEAITALHGKIVNGVRLKVRLADSP 370
Query: 241 KGDRNRKRQR 250
+ N KRQR
Sbjct: 371 TEESN-KRQR 379
>gi|321464386|gb|EFX75394.1| sex-lethal protein variant 1 [Daphnia pulex]
Length = 263
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 28 LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEF 87
L +DVTED+L FS GNI ++ +KD+ TG +GVA++RF K EA A+E +NG
Sbjct: 120 LPSRDVTEDELTNIFSAHGNIVQMNLLKDKITGMPRGVAFVRFDKREEALAAIEHLNGTI 179
Query: 88 LPNHSKPIKVLIA-----AKLEFKEGYRGGQK 114
+ PI V IA K + G+ G++
Sbjct: 180 PHGRTNPISVKIAEEHGKQKAAYFAGWEAGRQ 211
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++TE +L + F G + + ++D TG S G ++ + K +A +A++ +NG L
Sbjct: 36 QNLTESELFKMFVTIGTVTNCKIMRDFRTGYSYGFGFVNYQKADDAIRAIQTLNG--LQI 93
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 94 QNKRIKV 100
>gi|321464387|gb|EFX75395.1| sex-lethal protein variant 2 [Daphnia pulex]
Length = 297
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+DVTED+L FS GNI ++ +KD+ TG +GVA++RF K EA A+E +NG
Sbjct: 122 RDVTEDELTNIFSAHGNIVQMNLLKDKITGMPRGVAFVRFDKREEALAAIEHLNGTIPHG 181
Query: 91 HSKPIKVLIA-----AKLEFKEGYRGGQK 114
+ PI V IA K + G+ G++
Sbjct: 182 RTNPISVKIAEEHGKQKAAYFAGWEAGRQ 210
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++TE +L + F G + + ++D TG S G ++ + K +A +A++ +NG + N
Sbjct: 36 QNLTESELFKMFVTIGTVTNCKIMRDFRTGYSYGFGFVNYQKADDAIRAIQTLNGLQIQN 95
Query: 91 HSKPIKVLIA 100
K IKV A
Sbjct: 96 --KRIKVSYA 103
>gi|356573261|ref|XP_003554781.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Glycine
max]
Length = 483
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 13/89 (14%)
Query: 14 REYNDE----PPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY 67
+E +DE PPH + G +DV EDDLR+ P G+I E+R +KDR+TGE+KG A+
Sbjct: 92 KEKHDELLALPPHGSEVFIGGLPRDVCEDDLRELCEPMGDILEVRLMKDRDTGENKGYAF 151
Query: 68 IRFSKTSEAAKAVEEMNGEFLPNHSKPIK 96
+ F A KA+EE+ HSK K
Sbjct: 152 VAFKTKEVAQKAIEEI-------HSKEFK 173
>gi|388604324|pdb|4EGL|A Chain A, Crystal Structure Of Two Tandem Rna Recognition Motifs Of
Human Antigen R
Length = 177
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 98 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 157
Query: 91 HSKPIKVLIAAKLE 104
S+PI V AA LE
Sbjct: 158 SSEPITVXFAANLE 171
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 12 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNG--LRL 69
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 70 QSKTIKV 76
>gi|294941928|ref|XP_002783310.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
gi|239895725|gb|EER15106.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
Length = 429
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 7 INTHDRSREYNDEPPHSRLFILCGKDV-TEDDLRQGFSPFGNIQEIRCVKDRNTGESKGV 65
IN H + PP + +F+ D TEDDLR FS FGNI + V D++TG S+G
Sbjct: 317 INVHTAPQ--TKGPPGANVFVFWVPDAWTEDDLRDHFSSFGNIVSAKVVVDKHTGLSRGY 374
Query: 66 AYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLI 99
+I + A +AV EMNG F+ + + IKV I
Sbjct: 375 GFISYDNAQSAGRAVAEMNG-FVAANGRRIKVQI 407
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 33/51 (64%)
Query: 35 EDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
E DLR F +G ++++ ++DR+T +S+G+A++RF A++ +NG
Sbjct: 27 ESDLRAVFEEYGMVEDVFILRDRSTMQSRGMAFVRFRDIPSGMAAIKALNG 77
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 40/198 (20%)
Query: 23 SRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
++LF+ G E++LR F PFG I E+ G A++RF++ +A KA+
Sbjct: 133 TKLFVSGLGPGTQEEELRTIFEPFGRINEVHV-----PGPHALYAFVRFAEKEDALKAIR 187
Query: 82 EMNGEF-LPNHSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPG 140
E+NG + +P++V +A K A+ + + HG+
Sbjct: 188 EVNGRVTVEGSQRPLEVKVAESRAAKA---------------DRNAHHQQQQHGYEGVGA 232
Query: 141 IPMVVVPDFSYGLPRNGASALGGNAALSVVDSKGALQSLT-----KALAQATSLLRSAGL 195
+ ++ + LP NGA+ S + S G L + T T R+AG+
Sbjct: 233 TGLRLMAGAAASLPINGAT--------SSLTSPGRLDTPTINGIRGGSPSGTQAPRTAGV 284
Query: 196 STDSRFISRLRLDDFIYY 213
T+ +DD YY
Sbjct: 285 WTE-----YFTMDDTPYY 297
>gi|294886537|ref|XP_002771747.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
gi|239875509|gb|EER03563.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
Length = 422
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 20 PPHSRLFILCGKDV-TEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
PP + +F+ D TEDDLR FS FGNI + V D++TG S+G +I + A +
Sbjct: 321 PPGANVFVFSVPDAWTEDDLRDHFSSFGNIVSAKVVVDKHTGLSRGYGFISYDNAQSAGR 380
Query: 79 AVEEMNGEFLPNHSKPIKVLI 99
AV EMNG F+ + + IKV I
Sbjct: 381 AVAEMNG-FVAANGRRIKVQI 400
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 37/58 (63%)
Query: 35 EDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
E DLR F +G ++++ ++DR+T +S+G+A++RF A++ +NG L +++
Sbjct: 27 ESDLRAVFEEYGMVEDVFILRDRSTMQSRGMAFVRFRDIPSGMAAIKALNGHRLSHNT 84
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 23 SRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
++LF+ G E++LR F PFG I E+ G A++RF++ +A KA+
Sbjct: 133 TKLFVSGLGPATQEEELRTIFEPFGRINEVHV-----PGPHALYAFVRFAEKEDALKAIR 187
Query: 82 EMNGEFLPNHS-KPIKVLIA 100
E+NG S +P++V +A
Sbjct: 188 EVNGRVTVEGSQRPLEVKVA 207
>gi|255648067|gb|ACU24489.1| unknown [Glycine max]
Length = 439
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 13/89 (14%)
Query: 14 REYNDE----PPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY 67
+E +DE PPH + G +DV EDDLR+ P G+I E+R +KDR+TGE KG A+
Sbjct: 92 KEKHDELLALPPHGSEVFIGGLPRDVCEDDLRELCEPMGDILEVRLMKDRDTGEHKGYAF 151
Query: 68 IRFSKTSEAAKAVEEMNGEFLPNHSKPIK 96
+ F A KA+EE+ HSK K
Sbjct: 152 VAFKAKEVAQKAIEEI-------HSKEFK 173
>gi|356506096|ref|XP_003521823.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Glycine
max]
Length = 483
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 13/89 (14%)
Query: 14 REYNDE----PPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY 67
+E +DE PPH + G +DV EDDLR+ P G+I E+R +KDR+TGE KG A+
Sbjct: 92 KEKHDELLALPPHGSEVFIGGLPRDVCEDDLRELCEPMGDILEVRLMKDRDTGEHKGYAF 151
Query: 68 IRFSKTSEAAKAVEEMNGEFLPNHSKPIK 96
+ F A KA+EE+ HSK K
Sbjct: 152 VAFKTKEVAQKAIEEI-------HSKEFK 173
>gi|305855162|ref|NP_001182263.1| ELAV-like protein 1 [Sus scrofa]
gi|285818484|gb|ADC38915.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 [Sus
scrofa]
gi|456753432|gb|JAA74168.1| ELAV-like 1 (Hu antigen R) [Sus scrofa]
Length = 326
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FSPFG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RTMTQKDVEDMFSPFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EA+ A+ +
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEASMAIASL 305
Query: 84 NG 85
NG
Sbjct: 306 NG 307
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++LR FS G I+ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQEELRSLFSSIGEIESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRL-- 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|388326834|pdb|4ED5|A Chain A, Crystal Structure Of The Two N-Terminal Rrm Domains Of Hur
Complexed With Rna
gi|388326835|pdb|4ED5|B Chain B, Crystal Structure Of The Two N-Terminal Rrm Domains Of Hur
Complexed With Rna
Length = 177
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 98 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 157
Query: 91 HSKPIKVLIAAKLE 104
S+PI V AA LE
Sbjct: 158 SSEPITVKFAANLE 171
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 12 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNG--LRL 69
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 70 QSKTIKV 76
>gi|299473651|emb|CBN78045.1| poly(A) binding protein [Ectocarpus siliculosus]
Length = 688
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 18/123 (14%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDR-NTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
VTED +R+ F+P+G I R + D N +SKG ++ FS EA KA+ EMNG+ L N
Sbjct: 351 VTEDAMREAFAPYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLN- 409
Query: 92 SKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPGIPMVVVPDFSY 151
KPI V +A + E + ++ Q+ + G P G+PM Y
Sbjct: 410 -KPIYVALAQRREVRR-----TQLEAQFA----------QRTGGMPPRGMPMAPGAQGMY 453
Query: 152 GLP 154
G+P
Sbjct: 454 GMP 456
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMN 84
KDV E L + FS G + IR +D T S G AY+ F ++A +A++ MN
Sbjct: 51 KDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMN 104
>gi|194222346|ref|XP_001917559.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 45 [Equus
caballus]
Length = 452
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 47/68 (69%)
Query: 18 DEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
DEPP+SR+F++ K E LR+ FSPFG I++I V+D++T ESK + +++F+++S+
Sbjct: 21 DEPPNSRIFLVISKYTPESVLRERFSPFGEIKDIWVVRDKHTKESKDIGFVKFARSSQVF 80
Query: 78 KAVEEMNG 85
A +G
Sbjct: 81 IAQSRSSG 88
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 99 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 158
Query: 83 MNGEF 87
+ F
Sbjct: 159 CDRSF 163
>gi|395519869|ref|XP_003764064.1| PREDICTED: RNA-binding protein 45 [Sarcophilus harrisii]
Length = 380
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 45/65 (69%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 25 TRIFVMIPKSYTEEDLRDKFKVYGDIEYCSIIKNKTTGESKGLGYVRYLKPSQAAQAIEN 84
Query: 83 MNGEF 87
+ F
Sbjct: 85 CDRSF 89
>gi|270009354|gb|EFA05802.1| hypothetical protein TcasGA2_TC030646 [Tribolium castaneum]
Length = 212
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 23 SRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
S L+I KDVTEDD+ + FS +G I + +KD+ TG +GVA++RFS+ EA A+
Sbjct: 113 SNLYITNLPKDVTEDDVHRLFSNYGEIIQKSVLKDKITGMPRGVAFVRFSRGEEAKAAIA 172
Query: 82 EMNGEFLPNHSKPIKVLIA 100
+++G+ L N P+ V +A
Sbjct: 173 DLDGKLLENAMLPLSVRVA 191
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 34 TEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
TE+DL F+P G ++ I+ ++D NTG S G ++++ +AAKA++ +NG
Sbjct: 39 TEEDLALIFTPIGRVESIKIMRDYNTGYSFGFGFVKYFNEEDAAKAIQVING 90
>gi|225543108|ref|NP_001139415.1| sex lethal [Tribolium castaneum]
Length = 218
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 23 SRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
S L+I KDVTEDD+ + FS +G I + +KD+ TG +GVA++RFS+ EA A+
Sbjct: 113 SNLYITNLPKDVTEDDVHRLFSNYGEIIQKSVLKDKITGMPRGVAFVRFSRGEEAKAAIA 172
Query: 82 EMNGEFLPNHSKPIKVLIA 100
+++G+ L N P+ V +A
Sbjct: 173 DLDGKLLENAMLPLSVRVA 191
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 34 TEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
TE+DL F+P G ++ I+ ++D NTG S G ++++ +AAKA++ +NG
Sbjct: 39 TEEDLALIFTPIGRVESIKIMRDYNTGYSFGFGFVKYFNEEDAAKAIQVING 90
>gi|348510833|ref|XP_003442949.1| PREDICTED: ELAV-like protein 1-like [Oreochromis niloticus]
Length = 341
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++T+ D+ FS +G I R + D+ TG S+GVA+IRF K +EA +AV+ +NG+ P
Sbjct: 130 KNMTQKDVEDMFSRYGRIINSRVLVDQGTGSSRGVAFIRFDKRAEAEEAVKNLNGQKPPG 189
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 190 ASEPITVKFAA 200
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 261 IFIYNLGQDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 320
Query: 84 NG 85
NG
Sbjct: 321 NG 322
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + S+A +A+ +NG L
Sbjct: 44 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNPSDAERAISTLNGLRL-- 101
Query: 91 HSKPIKVLIA 100
SK IKV A
Sbjct: 102 QSKTIKVSYA 111
>gi|349603947|gb|AEP99634.1| RNA-binding protein 45-like protein, partial [Equus caballus]
Length = 273
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 7 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 66
Query: 83 MNGEF 87
+ F
Sbjct: 67 CDRSF 71
>gi|344268339|ref|XP_003406018.1| PREDICTED: RNA-binding protein 45 [Loxodonta africana]
Length = 450
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR+ F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 97 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 156
Query: 83 MNGEF 87
+ F
Sbjct: 157 CDRSF 161
>gi|345328005|ref|XP_001515360.2| PREDICTED: RNA-binding protein 45-like [Ornithorhynchus anatinus]
Length = 514
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DLR F +G+I+ +K++NTGESKG+ Y+R+ K S+AA A+E
Sbjct: 159 TRIFVMIPKAYTEEDLRDKFKVYGDIEYCSIIKNKNTGESKGLGYVRYLKPSQAALAIEN 218
Query: 83 MN 84
+
Sbjct: 219 CD 220
>gi|432936678|ref|XP_004082225.1| PREDICTED: ELAV-like protein 1-like [Oryzias latipes]
Length = 342
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++T+ D+ FS +G I R + D++TG S+GVA+IRF K SEA +AV+ +NG+ P
Sbjct: 131 KNMTQKDVEDMFSCYGRIINSRVLVDQSTGMSRGVAFIRFDKRSEAEEAVKSLNGQKPPG 190
Query: 91 HSKPIKVLIAA 101
++PI V AA
Sbjct: 191 VTEPITVKFAA 201
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 262 IFIYNLGQDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 321
Query: 84 NG 85
NG
Sbjct: 322 NG 323
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 18 DEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTS 74
DEP ++ ++ + +++D+LR FS G ++ + ++D+ G S G ++ + S
Sbjct: 29 DEPKDAKTNLIVNYLPQSMSQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNPS 88
Query: 75 EAAKAVEEMNGEFLPNHSKPIKVLIA 100
+A +A+ +NG L SK IKV A
Sbjct: 89 DAERAISTLNGLRL--QSKTIKVSYA 112
>gi|405967996|gb|EKC33105.1| CUG-BP- and ETR-3-like factor 4 [Crassostrea gigas]
Length = 349
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 24 RLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LF+ + K TEDD+RQ F PFGNI+E ++D+N G SKG A+++FS +EA A+
Sbjct: 39 KLFVGMLNKQQTEDDVRQLFQPFGNIEECTILRDQN-GNSKGCAFVKFSGHNEAQSAINA 97
Query: 83 MNG-EFLPNHSKPIKVLIA 100
++G + +P S + V A
Sbjct: 98 LHGSQTMPGASSSLVVKFA 116
>gi|255578218|ref|XP_002529977.1| nucleolar phosphoprotein, putative [Ricinus communis]
gi|223530539|gb|EEF32420.1| nucleolar phosphoprotein, putative [Ricinus communis]
Length = 557
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Query: 20 PPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PPH + G KD EDDLR P G+I EIR +KD++TGESKG A++ F A
Sbjct: 105 PPHGSEVFIGGLPKDALEDDLRDLCEPIGDIFEIRLMKDKDTGESKGFAFVAFRSKEVAQ 164
Query: 78 KAVEEMNGEFLPNHSKPIK 96
KA+EE+ HSK K
Sbjct: 165 KAIEEI-------HSKEFK 176
>gi|410445335|gb|ADB77883.2| Rbmy [Bos taurus]
Length = 387
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
+ TE+ L F +G+I E+ +KDRNT +S+G A+I F ++A A +EMNG+FL
Sbjct: 17 ETTEESLEAEFGKYGHIVEVLLIKDRNTNKSRGFAFITFESPADAKDAAKEMNGKFL--D 74
Query: 92 SKPIKVLIAAKLEFKEGYR 110
K IKV A K F+ G R
Sbjct: 75 GKTIKVEQANKPSFESGGR 93
>gi|167519406|ref|XP_001744043.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778005|gb|EDQ91621.1| predicted protein [Monosiga brevicollis MX1]
Length = 563
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 10 HDRSREYNDEP-PHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY 67
HD+ R+ DE +S L+I +DVTED LR FS FG I ++ + D N G+S+G +
Sbjct: 277 HDKIRQERDEKNKNSNLYIKHLPEDVTEDALRDKFSKFGTITSLKIMTD-NNGDSRGFGF 335
Query: 68 IRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIAAK 102
+ F EAA A++EM+G + KP+ V +A +
Sbjct: 336 VNFDSADEAAAAIQEMHGSMI--DGKPLYVALALR 368
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
+VTE L + FS G++ IR +D + +S G AY+ + + ++A A+EE+N E + H
Sbjct: 18 EVTEATLYEFFSQMGSVISIRVCRDAVSRQSLGYAYVNYQQHADAKHALEELNFEKI--H 75
Query: 92 SKPIKVLIAAK 102
KP +++ A +
Sbjct: 76 DKPCRIMWAQR 86
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++ L FS FG I + D GES+G ++ F K +A KA++ +NG+ L
Sbjct: 105 KEIDNKALYDTFSAFGTILSCKVAADE-KGESRGYGFVHFEKEEDAQKAIDTVNGKMLLK 163
Query: 91 HSKPIKVLIAAKLEFKEGYRGGQKISVQ 118
+ ++ K ++G R I V+
Sbjct: 164 QVVTVTKFLSRKEREQQGGRTYTNIYVK 191
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMN 84
T DDL++ F FG I KD N +S+G ++ F + A AVE MN
Sbjct: 198 ATNDDLKKLFEKFGTITSTFLAKDEND-KSRGFGFVNFENSEAANAAVEAMN 248
>gi|608537|gb|AAA96942.1| ribonucleoprotein [Xenopus laevis]
Length = 326
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ F PFG+I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RTMTQKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 252 GQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAINTLNG--LRL 86
Query: 91 HSKPIKVLIA 100
SK IKV A
Sbjct: 87 QSKTIKVSFA 96
>gi|170038732|ref|XP_001847202.1| developmentally regulated RNA-binding protein [Culex
quinquefasciatus]
gi|167882448|gb|EDS45831.1| developmentally regulated RNA-binding protein [Culex
quinquefasciatus]
Length = 405
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 53/83 (63%)
Query: 12 RSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
R + N+E + RLF+L K+++E+ LR+ F +G I + ++D+ T E KG AY++FS
Sbjct: 20 RKQTDNEEEKYLRLFVLIPKEMSEESLREEFGQYGTIDNVTIIRDKVTKEGKGFAYVKFS 79
Query: 72 KTSEAAKAVEEMNGEFLPNHSKP 94
+ + AA+A E+ + ++ ++P
Sbjct: 80 RFTHAARAFEDCDAKYKAVFAEP 102
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 48/173 (27%)
Query: 116 SVQYTSPQSAAYARDKFHGFAYPPGIPMVV------VPDFSYGLPRNGASALGGNAALSV 169
+V Y + QSA YARDK HG YPPG +++ V + P NG ++ +
Sbjct: 241 TVVYNNAQSAMYARDKIHGLEYPPGERLIIRLGHETVGVMTTNDPFNGGDRDASFCSVPL 300
Query: 170 ------------VDSKGALQSLTKALAQATSLLRSAGLSTDSRFISRLRLDDFI-YYIL- 215
V + + + KAL TS+L+ + R D I Y+L
Sbjct: 301 PAPLPMANPNADVAQRCFIVCIPKAL--PTSVLKQ----------TFCRFGDLIDVYLLP 348
Query: 216 ------VEFS---------QTLHGAEMYGSRLKVMEADPPKGDRNRKRQRLDD 253
+F+ +TLHGAE+ RLKV+EA+ P DR RKR R ++
Sbjct: 349 NKNCGYAKFASEKSAKKAMETLHGAEILNVRLKVLEAEEPSNDR-RKRMRHEE 400
>gi|348515473|ref|XP_003445264.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Oreochromis niloticus]
Length = 391
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 24 RLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI + TE L Q FS +G I E+ +KDR T +S+G A++ F ++A A E
Sbjct: 9 KLFIGGLNTETTEKALEQYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 83 MNGEFLPNHSKPIKVLIAAKLEFKEGYRGG 112
MNG+ L KPIKV A K +F+ R G
Sbjct: 69 MNGKSL--DGKPIKVEQATKPQFESAGRRG 96
>gi|148237069|ref|NP_001084078.1| ELAV-like protein 1-A [Xenopus laevis]
gi|123909821|sp|Q1JQ73.1|ELV1A_XENLA RecName: Full=ELAV-like protein 1-A; AltName: Full=36 kDa
embryonic-type cytoplasmic polyadenylation
element-binding protein; Short=36 kDa eCPE-binding
protein; Short=36 kDa eCPEB; Short=p36; AltName:
Full=Protein ElrA-A; Short=ElrA
gi|94574290|gb|AAI16460.1| ElrA protein [Xenopus laevis]
Length = 337
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ F PFG+I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 126 RTMTQKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPG 185
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 186 SSEPITVKFAA 196
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 263 GQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 318
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 13/81 (16%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDR-----------NTGESKGVAYIRFSKTSEAAKA 79
+++T+D+LR FS G ++ + ++D+ + G S G ++ + +A +A
Sbjct: 29 QNMTQDELRSLFSSIGEVESAKLIRDKVAGFEMRSSSLSKGHSLGYGFVNYLNAKDAERA 88
Query: 80 VEEMNGEFLPNHSKPIKVLIA 100
+ +NG L SK IKV A
Sbjct: 89 INTLNG--LRLQSKTIKVSFA 107
>gi|148232140|ref|NP_001088628.1| ELAV-like protein 1-B [Xenopus laevis]
gi|82232943|sp|Q5U259.1|ELV1B_XENLA RecName: Full=ELAV-like protein 1-B; AltName: Full=Protein ElrA-B;
Short=ElrA
gi|55250533|gb|AAH86269.1| LOC495680 protein [Xenopus laevis]
Length = 326
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ F PFG+I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RTMTQKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 252 GQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAINTLNG--LRL 86
Query: 91 HSKPIKVLIA 100
SK IKV A
Sbjct: 87 QSKTIKVSFA 96
>gi|332376136|gb|AEE63208.1| unknown [Dendroctonus ponderosae]
Length = 371
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+D+ ++N T ++ D H +F+ ++ D LR+ F+PFG I R V+D
Sbjct: 72 LDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETDTLREAFAPFGEISNCRIVRDP 131
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
T +SKG A++ F K +EA A++ MNG++L
Sbjct: 132 QTLKSKGYAFVSFVKKAEAENAIQAMNGQWL 162
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 16 YNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
YN P + + CG +T+D + + FS FG IQ+IR KD KG A+I+F
Sbjct: 197 YNQTSP-TNTTVYCGGFASGLTDDLVTKTFSRFGAIQDIRVFKD------KGYAFIKFVS 249
Query: 73 TSEAAKAVEEMNGEFLPNHS 92
A A+E ++ + H+
Sbjct: 250 KESATHAIENIHNTEINGHT 269
>gi|195051457|ref|XP_001993098.1| GH13638 [Drosophila grimshawi]
gi|193900157|gb|EDV99023.1| GH13638 [Drosophila grimshawi]
Length = 726
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++T+ DL FSPFG I R + D TG SKGV +IRF + EA +A++E+NG N
Sbjct: 208 KNMTQSDLESLFSPFGKIITSRILCDNITGLSKGVGFIRFDQRFEADRAIKELNGTTPKN 267
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 268 STEPITVKFA 277
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +++D++R F FG ++ + ++D+ TG+S G ++ + K +A KA+ +NG L N
Sbjct: 122 QTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINALNGLRLQN 181
Query: 91 HSKPIKVLIA 100
K IKV IA
Sbjct: 182 --KTIKVSIA 189
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ ++D + + KG ++ + EA A++ +NG L N
Sbjct: 369 ETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSLNGYTLGN 427
>gi|326514928|dbj|BAJ99825.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517426|dbj|BAK00080.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 153
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 21 PHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
P LF+ K T D LR+ F+ FG ++ R + DR TG SKG ++R+ +AAK
Sbjct: 46 PSPNLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKG 105
Query: 80 VEEMNGEFL 88
+E M+GEFL
Sbjct: 106 IEGMDGEFL 114
>gi|108744011|gb|ABG02278.1| heterogeneous nuclear ribonucleoprotein G [Haplochromis burtoni]
Length = 391
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 24 RLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI + TE L Q FS +G I E+ +KDR T +S+G A++ F ++A A E
Sbjct: 9 KLFIGGLNTETTEKALEQYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 83 MNGEFLPNHSKPIKVLIAAKLEFKEGYRGG 112
MNG+ L KPIKV A K +F+ R G
Sbjct: 69 MNGKSL--DGKPIKVEQATKPQFESAGRRG 96
>gi|440910206|gb|ELR60031.1| ELAV-like protein 1, partial [Bos grunniens mutus]
Length = 330
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 100 RNMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 159
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 160 SSEPITVKFAA 170
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 250 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 309
Query: 84 NG 85
NG
Sbjct: 310 NG 311
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 14 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRL-- 71
Query: 91 HSKPIKVLIA 100
SK IKV A
Sbjct: 72 QSKTIKVSYA 81
>gi|410913463|ref|XP_003970208.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Takifugu rubripes]
Length = 391
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 24 RLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI + TE L Q FS +G I E+ +KDR T +S+G A++ F S+A A E
Sbjct: 9 KLFIGGLNTETTEKALEQFFSKYGRIAEVLLMKDRETNKSRGFAFVTFESPSDAKDAARE 68
Query: 83 MNGEFLPNHSKPIKVLIAAKLEFKEGYRGG 112
MNG+ L K IKV A K +F+ G R G
Sbjct: 69 MNGKSL--DGKNIKVEQATKPQFESGGRRG 96
>gi|260783658|ref|XP_002586890.1| hypothetical protein BRAFLDRAFT_241504 [Branchiostoma floridae]
gi|229272019|gb|EEN42901.1| hypothetical protein BRAFLDRAFT_241504 [Branchiostoma floridae]
Length = 359
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 94/241 (39%), Gaps = 69/241 (28%)
Query: 25 LFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMN 84
L+I+ V+E L F ++ + KDR+TG+S+G AY R
Sbjct: 170 LYIIVDSTVSEHQLHALFDLIPGLEFVDLQKDRSTGQSRGCAYAR--------------- 214
Query: 85 GEFLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPGIPMV 144
YT+ SA YAR+K +GF YPPG ++
Sbjct: 215 ----------------------------------YTTAASAIYAREKLNGFEYPPGFKLL 240
Query: 145 VVPDFSYGLPRNGASA-LGGNAALSVVDSKGALQSLTKALAQATSLLRSAGLSTDSRF-- 201
R +A L G L+ D + + T+ A SRF
Sbjct: 241 FAFASVSACSRCYCTAQLPGPQPLA--DPSSDVAERLFIVCTPTAPPEYALKDVFSRFGK 298
Query: 202 ---ISRLRLDDFIYYILVEFSQ---------TLHGAEMYGSRLKVMEADPPKGDRNRKRQ 249
+ +R ++ Y +++Q +LHG E+ G RLKVM ADPPK D++RKR
Sbjct: 299 LIDVYLMRDKNYGY---AKYAQKVNAEAAIESLHGQEICGQRLKVMLADPPKQDQSRKRP 355
Query: 250 R 250
R
Sbjct: 356 R 356
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 45/72 (62%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+RLF++ K + E+DL+ F +G I+ + V+DR +G+ KG Y+++ K S AA A+E
Sbjct: 33 TRLFLVIPKSLEEEDLKDIFKEWGPIEYVNVVRDRGSGDPKGFGYVKYYKASHAALALEN 92
Query: 83 MNGEFLPNHSKP 94
+ + P ++P
Sbjct: 93 CDKTYKPVFAEP 104
>gi|115497832|ref|NP_001069922.1| ELAV-like protein 1 [Bos taurus]
gi|261244966|ref|NP_001159666.1| ELAV-like protein 1 [Ovis aries]
gi|73587279|gb|AAI02496.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Bos taurus]
gi|256665397|gb|ACV04844.1| ELAV-like protein 1 [Ovis aries]
gi|296485836|tpg|DAA27951.1| TPA: ELAV-like 1 (Hu antigen R) [Bos taurus]
Length = 326
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RNMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 84 NG 85
NG
Sbjct: 306 NG 307
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRL-- 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|410913465|ref|XP_003970209.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Takifugu rubripes]
Length = 383
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 24 RLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI + TE L Q FS +G I E+ +KDR T +S+G A++ F S+A A E
Sbjct: 9 KLFIGGLNTETTEKALEQFFSKYGRIAEVLLMKDRETNKSRGFAFVTFESPSDAKDAARE 68
Query: 83 MNGEFLPNHSKPIKVLIAAKLEFKEGYRGG 112
MNG+ L K IKV A K +F+ G R G
Sbjct: 69 MNGKSL--DGKNIKVEQATKPQFESGGRRG 96
>gi|417409800|gb|JAA51391.1| Putative rna-binding protein elav/hu rrm superfamily, partial
[Desmodus rotundus]
Length = 336
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 125 RNMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 184
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 185 SSEPITVKFAA 195
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 262 GQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 317
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +AV +NG L
Sbjct: 39 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAVNTLNG--LRL 96
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 97 QSKTIKV 103
>gi|242005325|ref|XP_002423520.1| protein elav, putative [Pediculus humanus corporis]
gi|212506634|gb|EEB10782.1| protein elav, putative [Pediculus humanus corporis]
Length = 373
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 42/70 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++T+ DL FSP+G I R + D TG SKGV +IRF + EA +A+ E+NG N
Sbjct: 160 KNMTQQDLESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRMEAERAISELNGSIPKN 219
Query: 91 HSKPIKVLIA 100
+ PI V A
Sbjct: 220 STDPITVKFA 229
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ ++D T + KG ++ + EA A++ +NG L N
Sbjct: 300 ETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGN 358
>gi|53749734|ref|NP_001005461.1| ELAV-like protein 1 [Xenopus (Silurana) tropicalis]
gi|82236379|sp|Q6GLB5.1|ELAV1_XENTR RecName: Full=ELAV-like protein 1; AltName: Full=Protein ElrA
gi|49250885|gb|AAH74585.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)
[Xenopus (Silurana) tropicalis]
Length = 326
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ F PFG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RTMTQKDVEDMFLPFGRIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 252 GQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAINTLNG--LRL 86
Query: 91 HSKPIKVLIA 100
SK IKV +A
Sbjct: 87 QSKTIKVSVA 96
>gi|384495100|gb|EIE85591.1| hypothetical protein RO3G_10301 [Rhizopus delemar RA 99-880]
Length = 359
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLP 89
+DVT++ L F P+G I + +KD +TG KG ++ FS + EA +AV EMNG F+
Sbjct: 288 AEDVTDEILINNFLPYGTITSAKIMKDESTGAPKGFGFVCFSSSDEANRAVAEMNGRFIS 347
Query: 90 NHSKPIKVLIAAKL 103
SKPI V +A L
Sbjct: 348 --SKPIYVALAQLL 359
>gi|229367606|gb|ACQ58783.1| Heterogeneous nuclear ribonucleoprotein G [Anoplopoma fimbria]
Length = 289
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 24 RLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI + TE L Q FS +G I E+ +KDR T +S+G A++ F ++A A E
Sbjct: 9 KLFIGGLNTETTEKALEQYFSKYGGIVEVILMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 83 MNGEFLPNHSKPIKVLIAAKLEFKEGYRGG 112
MNG+ L KPIKV A K +F+ R G
Sbjct: 69 MNGKSL--DGKPIKVEQATKPQFESAGRRG 96
>gi|47225325|emb|CAG09825.1| unnamed protein product [Tetraodon nigroviridis]
Length = 391
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 24 RLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI + TE L Q FS +G I E+ +KDR T +S+G A++ F S+A A E
Sbjct: 9 KLFIGGLNTETTEKALEQFFSKYGRIAEVILMKDRETNKSRGFAFVTFESPSDAKDAARE 68
Query: 83 MNGEFLPNHSKPIKVLIAAKLEFKEGYRGG 112
MNG+ L K IKV A K +F+ G R G
Sbjct: 69 MNGKSL--DGKNIKVEQATKPQFESGGRRG 96
>gi|390464354|ref|XP_002749325.2| PREDICTED: RNA-binding protein 45-like [Callithrix jacchus]
Length = 417
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 48/72 (66%)
Query: 23 SRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+R+F++ K TE+DL + F +G+I+ +K++ TGESKG+ Y+R+ K S+AA+A+E
Sbjct: 65 TRIFVMIPKSYTEEDLWEKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 124
Query: 83 MNGEFLPNHSKP 94
+ F ++P
Sbjct: 125 CDRSFRAILAEP 136
>gi|296423714|ref|XP_002841398.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637636|emb|CAZ85589.1| unnamed protein product [Tuber melanosporum]
Length = 318
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 60/98 (61%), Gaps = 6/98 (6%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G +VT+D L + FS + ++Q+ R ++D+ T +SKG ++ FS E
Sbjct: 201 DPSHFRLFVGNLAG-EVTDDSLLKAFSKYPSVQKARVIRDKRTTKSKGYGFVAFSDGDEY 259
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAAKLEFKEGYRGGQK 114
+A EMNG+++ +H P+ +L + E K GG+K
Sbjct: 260 FRAAREMNGKYIGSH--PV-LLKRSNTEIKPIVVGGKK 294
>gi|41055734|ref|NP_956476.1| TIA1 cytotoxic granule-associated RNA binding protein 1 [Danio
rerio]
gi|28277744|gb|AAH45485.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
gi|44890544|gb|AAH66734.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ +++ DD+R F+PFG I + R VKD TG+SKG +I F
Sbjct: 87 SSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVKDLATGKSKGYGFISFI 146
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+++MNG++L
Sbjct: 147 NKWDAESAIQQMNGQWL 163
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 23 SRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
S + CG +++ +RQ FSPFG I EIR + KG +++RF AA A
Sbjct: 204 SNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFDSHEGAAHA 257
Query: 80 VEEMNGEFLPNHS 92
+ +NG + H+
Sbjct: 258 IVSVNGTCIEGHT 270
>gi|225713126|gb|ACO12409.1| Sex-lethal homolog [Lepeophtheirus salmonis]
gi|290561258|gb|ADD38031.1| Sex-lethal homolog [Lepeophtheirus salmonis]
Length = 255
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 23 SRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
S L+I G VTE+ + FS +G I + +KD TG+ KGVA++R+SK SEA A+
Sbjct: 116 SNLYIANLGCSVTEEAIHSMFSTYGKIVTLNLLKDPITGKPKGVAFVRYSKQSEAKDAIT 175
Query: 82 EMNGEFLPNHSKPIKVLIA 100
+NG + + KP+ V +A
Sbjct: 176 ALNGTMMTGNDKPMLVKVA 194
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+++L F G + + R ++DR +G S G ++ + +A +A+E ++G + N
Sbjct: 39 QSMTDNELFSMFVTCGPLVQARIIRDRKSGYSFGYGFVHYENPKDAKRAIETLSGLAIQN 98
Query: 91 HSKPIKVLIA 100
K IKV A
Sbjct: 99 --KTIKVSYA 106
>gi|320167378|gb|EFW44277.1| poly A binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 662
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+ ED +R F+PFG I ++ ++D G+S+G +I FS EA KAV EMNG+ +
Sbjct: 339 IDEDKIRTEFAPFGTITSVKIMRDEK-GKSRGFGFICFSSAEEATKAVTEMNGQTIQGFP 397
Query: 93 KPIKVLIAAKLE 104
KP+ V +A + E
Sbjct: 398 KPLYVALAQRAE 409
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
+D T+ L FS FG I + +K + +SKG ++ + K +A AV +NG L
Sbjct: 233 EDTTDAALNDMFSKFGKITSVVIMKSSDDDKSKGFGFVCYEKVEDAQAAVNALNGTEL 290
Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
+VTE L + F+ G + IR +D T S G AY+ F +A +A++ +N +
Sbjct: 55 EVTEAQLFEIFNNIGPVVSIRVCRDAITRRSLGYAYVNFHAAVDAERALDTLNYSLI--R 112
Query: 92 SKPIKVL 98
KP +++
Sbjct: 113 GKPCRIM 119
>gi|297275993|ref|XP_001092907.2| PREDICTED: ELAV-like protein 1 isoform 4 [Macaca mulatta]
Length = 387
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 313 GQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 368
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNG--LRL 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|332852452|ref|XP_001156587.2| PREDICTED: ELAV-like protein 1 isoform 1 [Pan troglodytes]
gi|397477357|ref|XP_003810039.1| PREDICTED: ELAV-like protein 1 [Pan paniscus]
gi|426386983|ref|XP_004059958.1| PREDICTED: ELAV-like protein 1 isoform 2 [Gorilla gorilla gorilla]
gi|194375035|dbj|BAG62630.1| unnamed protein product [Homo sapiens]
Length = 353
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 142 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 201
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 202 SSEPITVKFAA 212
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 279 GQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 334
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 56 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRL-- 113
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 114 QSKTIKV 120
>gi|26354232|dbj|BAC40744.1| unnamed protein product [Mus musculus]
Length = 305
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 94 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 153
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 154 SSEPITVKFAA 164
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 225 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 284
Query: 84 NG 85
NG
Sbjct: 285 NG 286
Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 8 QNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNG--LRL 65
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 66 QSKTIKV 72
>gi|301773130|ref|XP_002921959.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Ailuropoda
melanoleuca]
Length = 339
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 259 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 318
Query: 84 NG 85
NG
Sbjct: 319 NG 320
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNG--LRL 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|224087249|ref|XP_002190976.1| PREDICTED: ELAV-like protein 1-like [Taeniopygia guttata]
gi|449266784|gb|EMC77794.1| ELAV-like protein 1 [Columba livia]
Length = 326
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RSMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITNFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 252 GQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRL-- 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|74179923|dbj|BAE36520.1| unnamed protein product [Mus musculus]
Length = 308
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 97 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 156
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 157 SSEPITVKFAA 167
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 228 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 287
Query: 84 NG 85
NG
Sbjct: 288 NG 289
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ S G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 11 QNMTQEELQGVLSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNG--LRL 68
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 69 QSKTIKV 75
>gi|67968717|dbj|BAE00717.1| unnamed protein product [Macaca fascicularis]
Length = 326
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 246 IFIYNLGQDADEGILWQMFEPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 84 NG 85
NG
Sbjct: 306 NG 307
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRL-- 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|195504962|ref|XP_002099304.1| GE10834 [Drosophila yakuba]
gi|194185405|gb|EDW99016.1| GE10834 [Drosophila yakuba]
Length = 464
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+D+ ++N T ++ D H +F+ ++ + LR+ F+PFG I R V+D
Sbjct: 71 LDKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDP 130
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
+T +SKG A++ F K +EA A++ MNG+++
Sbjct: 131 HTMKSKGYAFVSFVKKAEAENAIQAMNGQWI 161
>gi|432119731|gb|ELK38615.1| ELAV-like protein 1 [Myotis davidii]
Length = 296
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 85 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 144
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 145 SSEPITVKFAA 155
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 216 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 275
Query: 84 NG 85
NG
Sbjct: 276 NG 277
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+T+D+LR FS G ++ + ++D+ G S G ++ + +A KA+ +NG L S
Sbjct: 1 MTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAEKAINTLNG--LRLQS 58
Query: 93 KPIKV 97
K IKV
Sbjct: 59 KTIKV 63
>gi|355685803|gb|AER97853.1| ELAV-like protein 1 [Mustela putorius furo]
Length = 343
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 133 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 192
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 193 SSEPITVKFAA 203
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 264 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 323
Query: 84 NG 85
NG
Sbjct: 324 NG 325
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 47 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRL-- 104
Query: 91 HSKPIKVLIA 100
SK IKV A
Sbjct: 105 QSKTIKVSYA 114
>gi|194910009|ref|XP_001982056.1| GG12380 [Drosophila erecta]
gi|190656694|gb|EDV53926.1| GG12380 [Drosophila erecta]
Length = 464
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+D+ ++N T ++ D H +F+ ++ + LR+ F+PFG I R V+D
Sbjct: 71 LDKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDP 130
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
+T +SKG A++ F K +EA A++ MNG+++
Sbjct: 131 HTMKSKGYAFVSFVKKAEAENAIQAMNGQWI 161
>gi|119589356|gb|EAW68950.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_b [Homo sapiens]
Length = 445
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 234 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 293
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 294 SSEPITVKFAA 304
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 365 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 424
Query: 84 NG 85
NG
Sbjct: 425 NG 426
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 148 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRL-- 205
Query: 91 HSKPIKVLIA 100
SK IKV A
Sbjct: 206 QSKTIKVSYA 215
>gi|344247291|gb|EGW03395.1| ELAV-like protein 1 [Cricetulus griseus]
Length = 335
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 107 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 166
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 167 SSEPITVKFAA 177
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 261 GQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 316
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 21 QNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNG--LRL 78
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 79 QSKTIKV 85
>gi|73986922|ref|XP_854218.1| PREDICTED: ELAV-like protein 1 isoform 1 [Canis lupus familiaris]
gi|301773126|ref|XP_002921957.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Ailuropoda
melanoleuca]
gi|344299314|ref|XP_003421331.1| PREDICTED: ELAV-like protein 1 [Loxodonta africana]
gi|281349989|gb|EFB25573.1| hypothetical protein PANDA_010904 [Ailuropoda melanoleuca]
Length = 326
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 84 NG 85
NG
Sbjct: 306 NG 307
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNG--LRL 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|26344670|dbj|BAC35984.1| unnamed protein product [Mus musculus]
Length = 326
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 84 NG 85
NG
Sbjct: 306 NG 307
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNG--LRL 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|301773128|ref|XP_002921958.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Ailuropoda
melanoleuca]
Length = 325
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 245 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 304
Query: 84 NG 85
NG
Sbjct: 305 NG 306
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRL-- 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|195161932|ref|XP_002021810.1| GL26299 [Drosophila persimilis]
gi|194103610|gb|EDW25653.1| GL26299 [Drosophila persimilis]
Length = 678
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++T+ DL FSP+G I R + D TG SKGV +IRF + EA +A++E+NG N
Sbjct: 205 KNMTQSDLESLFSPYGKIITSRILCDNITGLSKGVGFIRFDQRFEADRAIKELNGTTPKN 264
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 265 STEPITVKFA 274
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 19 EP-PHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
EP P + L + + +++D++R F FG ++ + ++D+ TG+S G ++ + K +A
Sbjct: 105 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDA 164
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
KA+ +NG L N K IKV IA
Sbjct: 165 EKAINALNGLRLQN--KTIKVSIA 186
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ ++D + + KG ++ + EA A++ +NG L N
Sbjct: 366 ETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSLNGYTLGN 424
>gi|429859938|gb|ELA34694.1| rnp domain protein [Colletotrichum gloeosporioides Nara gc5]
Length = 312
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 19 EPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
+P H RLF+ +VT+D L + FS + ++Q+ R ++D+ T +SKG ++ F+ + +
Sbjct: 163 DPSHLRLFVNLAGEVTDDSLLKAFSRWKSVQKSRVIRDKRTAKSKGYGFVSFNDADDFFQ 222
Query: 79 AVEEMNGEFLPNHSKPIKVLIAAKLEFK 106
A +EMNG+++ +H P+ V+ A E K
Sbjct: 223 AAKEMNGKYIQSH--PV-VVRKANTEIK 247
>gi|297632376|ref|NP_001172077.1| ELAV-like protein 1 [Oryctolagus cuniculus]
gi|296399062|gb|ADH10369.1| embryonic lethal abnormal vision-like 1 protein [Oryctolagus
cuniculus]
Length = 326
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 246 IFIYNLGQDAHEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 84 NG 85
NG
Sbjct: 306 NG 307
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++LR FS G ++ + ++D+ G S G ++ + +A KA+ +NG L
Sbjct: 29 QNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAEKAINTLNG--LRL 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|126323791|ref|XP_001366151.1| PREDICTED: ELAV-like protein 1 [Monodelphis domestica]
Length = 326
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 84 NG 85
NG
Sbjct: 306 NG 307
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNG--LRL 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|26347149|dbj|BAC37223.1| unnamed protein product [Mus musculus]
Length = 326
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Score = 43.1 bits (100), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNG--LRL 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|410950299|ref|XP_003981845.1| PREDICTED: ELAV-like protein 1 [Felis catus]
Length = 336
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 125 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 184
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 185 SSEPITVKFAA 195
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 262 GQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 317
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 39 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNG--LRL 96
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 97 QSKTIKV 103
>gi|332264173|ref|XP_003281121.1| PREDICTED: ELAV-like protein 1 [Nomascus leucogenys]
Length = 326
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 84 NG 85
NG
Sbjct: 306 NG 307
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNG--LRL 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|242080305|ref|XP_002444921.1| hypothetical protein SORBIDRAFT_07g001490 [Sorghum bicolor]
gi|241941271|gb|EES14416.1| hypothetical protein SORBIDRAFT_07g001490 [Sorghum bicolor]
Length = 484
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 20 PPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PPH + G +D+TEDDLR+ P G I E+R KD++T E+KG A++ F+ A
Sbjct: 115 PPHGSQVFIGGLPRDITEDDLRELCEPLGEIYEVRLTKDKDTNENKGFAFVTFTDKDAAQ 174
Query: 78 KAVEEMN 84
+A+E++
Sbjct: 175 RAIEDVQ 181
>gi|149716413|ref|XP_001497933.1| PREDICTED: ELAV-like protein 1 [Equus caballus]
Length = 326
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 84 NG 85
NG
Sbjct: 306 NG 307
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +AV +NG L
Sbjct: 29 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAVNTLNG--LRL 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|38201714|ref|NP_001410.2| ELAV-like protein 1 [Homo sapiens]
gi|114675067|ref|XP_001156643.1| PREDICTED: ELAV-like protein 1 isoform 2 [Pan troglodytes]
gi|395750352|ref|XP_002828622.2| PREDICTED: ELAV-like protein 1 [Pongo abelii]
gi|395841768|ref|XP_003793705.1| PREDICTED: ELAV-like protein 1 [Otolemur garnettii]
gi|402914021|ref|XP_003919435.1| PREDICTED: ELAV-like protein 1 [Papio anubis]
gi|403296075|ref|XP_003938946.1| PREDICTED: ELAV-like protein 1 [Saimiri boliviensis boliviensis]
gi|426386981|ref|XP_004059957.1| PREDICTED: ELAV-like protein 1 isoform 1 [Gorilla gorilla gorilla]
gi|20981691|sp|Q15717.2|ELAV1_HUMAN RecName: Full=ELAV-like protein 1; AltName: Full=Hu-antigen R;
Short=HuR
gi|13097228|gb|AAH03376.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Homo sapiens]
gi|32879929|gb|AAP88795.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Homo sapiens]
gi|60654991|gb|AAX32059.1| ELAV-like 1 [synthetic construct]
gi|60654993|gb|AAX32060.1| ELAV-like 1 [synthetic construct]
gi|60654995|gb|AAX32061.1| ELAV-like 1 [synthetic construct]
gi|60654997|gb|AAX32062.1| ELAV-like 1 [synthetic construct]
gi|119589355|gb|EAW68949.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Homo sapiens]
gi|157928080|gb|ABW03336.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [synthetic construct]
gi|157928791|gb|ABW03681.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [synthetic construct]
gi|208966198|dbj|BAG73113.1| ELAV-like 1protein [synthetic construct]
gi|355703066|gb|EHH29557.1| hypothetical protein EGK_10021 [Macaca mulatta]
gi|355755385|gb|EHH59132.1| hypothetical protein EGM_09177 [Macaca fascicularis]
gi|380784245|gb|AFE63998.1| ELAV-like protein 1 [Macaca mulatta]
gi|383416395|gb|AFH31411.1| ELAV-like protein 1 [Macaca mulatta]
gi|384945706|gb|AFI36458.1| ELAV-like protein 1 [Macaca mulatta]
gi|410212674|gb|JAA03556.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410265350|gb|JAA20641.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410305890|gb|JAA31545.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410342973|gb|JAA40433.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
Length = 326
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 84 NG 85
NG
Sbjct: 306 NG 307
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNG--LRL 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|326934269|ref|XP_003213214.1| PREDICTED: ELAV-like protein 1-like [Meleagris gallopavo]
Length = 298
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 87 RSMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITNFNGHKPPG 146
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 147 SSEPITVKFAA 157
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 224 GQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 279
>gi|74138233|dbj|BAE28602.1| unnamed protein product [Mus musculus]
Length = 326
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 84 NG 85
NG
Sbjct: 306 NG 307
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNG--LRL 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|26330019|dbj|BAC28748.1| unnamed protein product [Mus musculus]
Length = 326
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L + F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 246 IFIYNLGQDADEGILWRMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 84 NG 85
NG
Sbjct: 306 NG 307
Score = 43.1 bits (100), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNG--LRL 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|31542602|ref|NP_034615.2| ELAV-like protein 1 [Mus musculus]
gi|157818153|ref|NP_001102318.1| ELAV-like protein 1 [Rattus norvegicus]
gi|354488231|ref|XP_003506274.1| PREDICTED: ELAV-like protein 1 [Cricetulus griseus]
gi|341940489|sp|P70372.2|ELAV1_MOUSE RecName: Full=ELAV-like protein 1; AltName: Full=Elav-like generic
protein; AltName: Full=Hu-antigen R; Short=HuR; AltName:
Full=MelG
gi|26348505|dbj|BAC37892.1| unnamed protein product [Mus musculus]
gi|83308037|emb|CAI77902.1| HuR RNA binding protein [Spalax judaei]
gi|148690049|gb|EDL21996.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Mus musculus]
gi|148690050|gb|EDL21997.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Mus musculus]
gi|149015619|gb|EDL75000.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149015620|gb|EDL75001.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|197245826|gb|AAI68972.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Rattus norvegicus]
gi|208609536|dbj|BAG72208.1| HuR [Rattus norvegicus]
Length = 326
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 84 NG 85
NG
Sbjct: 306 NG 307
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNG--LRL 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|351701320|gb|EHB04239.1| ELAV-like protein 1, partial [Heterocephalus glaber]
Length = 329
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 118 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 177
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 178 SSEPITVKFAA 188
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 249 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 308
Query: 84 NG 85
NG
Sbjct: 309 NG 310
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 32 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRL-- 89
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 90 QSKTIKV 96
>gi|395513446|ref|XP_003760935.1| PREDICTED: ELAV-like protein 1 [Sarcophilus harrisii]
Length = 374
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 163 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 222
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 223 SSEPITVKFAA 233
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 294 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 353
Query: 84 NG 85
NG
Sbjct: 354 NG 355
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 77 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNG--LRL 134
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 135 QSKTIKV 141
>gi|1022961|gb|AAB41913.1| HuR RNA binding protein [Homo sapiens]
Length = 326
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPIAVKFAA 185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 84 NG 85
NG
Sbjct: 306 NG 307
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNG--LRL 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|357512617|ref|XP_003626597.1| RNA-binding protein [Medicago truncatula]
gi|355501612|gb|AES82815.1| RNA-binding protein [Medicago truncatula]
Length = 479
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 11 DRSREYNDE----PPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKG 64
+ RE +DE PPH + G +D ++DD+R+ P G+I EI+ +KDR TGESKG
Sbjct: 87 EEEREKHDELLSRPPHGSEVFIGGLPRDTSDDDVRELCEPMGDIVEIKLIKDRETGESKG 146
Query: 65 VAYIRFSKTSEAAKAVEEM-NGEF 87
A++ + A KA++++ N EF
Sbjct: 147 YAFVGYKTKEVAQKAIDDIHNKEF 170
>gi|343959022|dbj|BAK63366.1| ELAV-like protein 1 [Pan troglodytes]
Length = 305
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 225 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 284
Query: 84 NG 85
NG
Sbjct: 285 NG 286
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNG--LRL 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|442625619|ref|NP_001259974.1| RNA-binding protein 9, isoform J [Drosophila melanogaster]
gi|440213243|gb|AGB92511.1| RNA-binding protein 9, isoform J [Drosophila melanogaster]
Length = 684
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++T+ DL FSP+G I R + D TG SKGV +IRF + EA +A++E+NG N
Sbjct: 205 KNMTQSDLESLFSPYGKIITSRILCDNITGLSKGVGFIRFDQRFEADRAIKELNGTTPKN 264
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 265 STEPITVKFA 274
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 19 EP-PHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
EP P + L + + +++D++R F FG ++ + ++D+ TG+S G ++ + K +A
Sbjct: 105 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDA 164
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
KA+ +NG L N K IKV IA
Sbjct: 165 EKAINALNGLRLQN--KTIKVSIA 186
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
D E+ L Q F PFG +Q ++ ++D + + KG ++ + EA A++ +NG L N
Sbjct: 366 DTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSLNGYTLGN 424
>gi|432877561|ref|XP_004073160.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Oryzias latipes]
Length = 380
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 24 RLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI + TE L Q FS +G I E+ +KDR T +S+G A++ F ++A A E
Sbjct: 9 KLFIGGLNTETTEKALEQYFSKYGRIVEVILMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 83 MNGEFLPNHSKPIKVLIAAKLEFKEGYRGG 112
MNG+ L KPIKV A K +F+ R G
Sbjct: 69 MNGKSL--DGKPIKVEQATKPQFESAGRRG 96
>gi|124359745|gb|ABD32695.2| RNA-binding region RNP-1 (RNA recognition motif); Calcium-binding
EF-hand [Medicago truncatula]
Length = 559
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 11 DRSREYNDE----PPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKG 64
+ RE +DE PPH + G +D ++DD+R+ P G+I EI+ +KDR TGESKG
Sbjct: 87 EEEREKHDELLSRPPHGSEVFIGGLPRDTSDDDVRELCEPMGDIVEIKLIKDRETGESKG 146
Query: 65 VAYIRFSKTSEAAKAVEEM-NGEF 87
A++ + A KA++++ N EF
Sbjct: 147 YAFVGYKTKEVAQKAIDDIHNKEF 170
>gi|432877559|ref|XP_004073159.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Oryzias latipes]
Length = 386
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 24 RLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI + TE L Q FS +G I E+ +KDR T +S+G A++ F ++A A E
Sbjct: 9 KLFIGGLNTETTEKALEQYFSKYGRIVEVILMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 83 MNGEFLPNHSKPIKVLIAAKLEFKEGYRGG 112
MNG+ L KPIKV A K +F+ R G
Sbjct: 69 MNGKSL--DGKPIKVEQATKPQFESAGRRG 96
>gi|19549690|ref|NP_599125.1| RNA-binding protein 9, isoform E [Drosophila melanogaster]
gi|19549692|ref|NP_599126.1| RNA-binding protein 9, isoform F [Drosophila melanogaster]
gi|62471589|ref|NP_001014462.1| RNA-binding protein 9, isoform G [Drosophila melanogaster]
gi|221330652|ref|NP_476936.3| RNA-binding protein 9, isoform H [Drosophila melanogaster]
gi|158227|gb|AAC13646.1| RNA-binding protein [Drosophila melanogaster]
gi|22945352|gb|AAN10402.1| RNA-binding protein 9, isoform E [Drosophila melanogaster]
gi|22945353|gb|AAN10403.1| RNA-binding protein 9, isoform F [Drosophila melanogaster]
gi|40714603|gb|AAR88559.1| GH26440p [Drosophila melanogaster]
gi|61678275|gb|AAX52651.1| RNA-binding protein 9, isoform G [Drosophila melanogaster]
gi|220901921|gb|AAN10401.3| RNA-binding protein 9, isoform H [Drosophila melanogaster]
gi|220951536|gb|ACL88311.1| Rbp9-PE [synthetic construct]
Length = 439
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++T+ DL FSP+G I R + D TG SKGV +IRF + EA +A++E+NG N
Sbjct: 205 KNMTQSDLESLFSPYGKIITSRILCDNITGLSKGVGFIRFDQRFEADRAIKELNGTTPKN 264
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 265 STEPITVKFA 274
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 19 EP-PHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
EP P + L + + +++D++R F FG ++ + ++D+ TG+S G ++ + K +A
Sbjct: 105 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDA 164
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
KA+ +NG L N K IKV IA
Sbjct: 165 EKAINALNGLRLQN--KTIKVSIA 186
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
D E+ L Q F PFG +Q ++ ++D + + KG ++ + EA A++ +NG L N
Sbjct: 366 DTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSLNGYTLGN 424
>gi|47086779|ref|NP_997793.1| cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
gi|28279551|gb|AAH45368.1| Cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
Length = 386
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N S + D H +F+ ++T DD+R F+PFG I + R VKD
Sbjct: 73 MGKEVKVNWATSPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGRISDARVVKDMA 132
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A+++M G++L
Sbjct: 133 TGKSKGYGFVSFFNKWDAENAIQQMGGQWL 162
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINT-HDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y NT H E ++ S + CG +TE +RQ FSPFG I E+R D
Sbjct: 183 YETNTKHLSFDEVVNQSSPSNCTVYCGGVTTGLTEQLMRQTFSPFGQIMEVRVFPD---- 238
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG L H
Sbjct: 239 --KGYSFVRFNSHESAAHAIVSVNGTSLEGH 267
>gi|357510439|ref|XP_003625508.1| RNA binding protein [Medicago truncatula]
gi|355500523|gb|AES81726.1| RNA binding protein [Medicago truncatula]
Length = 141
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 7 INTHDRSREYNDEPPHSRLFILCGKDVTEDD-LRQGFSPFGNIQEIRCVKDRNTGESKGV 65
+++H S N +LFI +T D+ L + FSPFG + E + + DR +G SKG
Sbjct: 19 VSSHFTSIRLNSTLTSPKLFISGLSRLTTDEKLTEAFSPFGQLLEAKVITDRGSGRSKGF 78
Query: 66 AYIRFSKTSEAAKAVEEMNGEFL 88
A++ +S EA KA E MN +FL
Sbjct: 79 AFVSYSTIEEAEKAREGMNAKFL 101
>gi|449431998|ref|XP_004133787.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Cucumis
sativus]
gi|449477982|ref|XP_004155183.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Cucumis
sativus]
Length = 481
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 20 PPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PPH + G +DV E+DLR G I EIR +KD+++GESKG A+I F A
Sbjct: 101 PPHGSEVFIGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQ 160
Query: 78 KAVEEMNG 85
KA+E+++G
Sbjct: 161 KAIEDLHG 168
>gi|91086169|ref|XP_970456.1| PREDICTED: similar to TIA-1 homolog [Tribolium castaneum]
gi|270010230|gb|EFA06678.1| hypothetical protein TcasGA2_TC009608 [Tribolium castaneum]
Length = 364
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+D+ ++N T ++ D H +F+ ++ + LR+ F+PFG I R V+D
Sbjct: 72 LDKEMKVNWATSPGNQPKQDTSNHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDP 131
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
T +SKG A++ F K +EA A++ MNG++L
Sbjct: 132 QTLKSKGYAFVSFVKKAEAENAIQAMNGQWL 162
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 15/81 (18%)
Query: 16 YNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
YN P + + CG +TED +++ FS FG IQ+IR KD KG A+I+F+
Sbjct: 197 YNQSSP-TNCTVYCGGFTTGLTEDLMQKTFSQFGVIQDIRVFKD------KGYAFIKFAT 249
Query: 73 TSEAAKAVE-----EMNGEFL 88
A A+E E+NG+ +
Sbjct: 250 KESATHAIETIHNTEINGQMV 270
>gi|297847300|ref|XP_002891531.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
gi|297337373|gb|EFH67790.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
Length = 669
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 14 REYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
+E D+ S L++ + VT+D LR+ F+PFG I + ++D TG S+G ++ FS
Sbjct: 312 KEAADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDP-TGVSRGSGFVAFST 370
Query: 73 TSEAAKAVEEMNGEFLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKF 132
EA++A+ EMNG+ + +KP+ V +A + E ++ Q ++ + A R +
Sbjct: 371 PEEASRAITEMNGKMI--VTKPLYVALAQRKEDRKARLQAQFSQMRPVNMPPAVGPRMQM 428
Query: 133 HGFAYPPGIP 142
YPPG P
Sbjct: 429 ----YPPGGP 434
>gi|224130652|ref|XP_002320894.1| predicted protein [Populus trichocarpa]
gi|222861667|gb|EEE99209.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 20 PPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PPH + G +DV ED+LR P G I EIR +KD+++GESKG A++ F A
Sbjct: 102 PPHGSEVFIGGLPRDVIEDELRDLCEPIGEIFEIRLMKDKDSGESKGFAFVAFKSKEVAR 161
Query: 78 KAVEEMN 84
KA+EE++
Sbjct: 162 KAIEELH 168
>gi|270014670|gb|EFA11118.1| hypothetical protein TcasGA2_TC004718 [Tribolium castaneum]
Length = 350
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++T+ DL FSP+G I R + D TG SKGV +IRF + EA +A++E+NG
Sbjct: 137 KNMTQQDLESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRLEAERAIQELNGTIPKG 196
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 197 STEPITVKFA 206
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ ++D T + KG ++ + EA A++ +NG L N
Sbjct: 277 ETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGN 335
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 13/78 (16%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNT-----------GESKGVAYIRFSKTSEAAKA 79
+ +T++++R FS G ++ + ++D+ T G+S G ++ + + +A KA
Sbjct: 40 QTMTQEEIRSLFSSIGEVESCKLIRDKVTVPGVITSPLLTGQSLGYGFVNYHRPEDAEKA 99
Query: 80 VEEMNGEFLPNHSKPIKV 97
+ +NG L N K IKV
Sbjct: 100 INTLNGLRLQN--KTIKV 115
>gi|255568699|ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 126
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 8/103 (7%)
Query: 20 PPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
PP+S+LF+ V E L+ FS FG + E+R + D+++G S+G ++ FSK +EA
Sbjct: 22 PPNSKLFVAGLSWSVDEKSLKDAFSSFGEVSEVRIMYDKDSGRSRGFGFVNFSKENEAVC 81
Query: 79 AVEEMNGEFLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQYTS 121
A + M+G+ L +P+++ A E RGG + + +S
Sbjct: 82 AKDAMDGKAL--LGRPLRISFAL-----EKVRGGPIVVPRLSS 117
>gi|45382283|ref|NP_990164.1| ELAV-like protein 1 [Gallus gallus]
gi|5738249|gb|AAD50313.1|AF176673_1 RNA-binding protein HuA [Gallus gallus]
Length = 326
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RSMTQKDVVDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITNFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 252 GQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRL-- 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|189233813|ref|XP_971256.2| PREDICTED: similar to RNA-binding protein, putative [Tribolium
castaneum]
Length = 352
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++T+ DL FSP+G I R + D TG SKGV +IRF + EA +A++E+NG
Sbjct: 139 KNMTQQDLESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRLEAERAIQELNGTIPKG 198
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 199 STEPITVKFA 208
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ ++D T + KG ++ + EA A++ +NG L N
Sbjct: 279 ETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGN 337
>gi|357144628|ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium distachyon]
Length = 153
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 21 PHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
P LF+ K T D LR+ F+ FG + R V DR TG SKG ++R++ +A+K
Sbjct: 46 PSPNLFVSGLSKRTTTDGLREAFAKFGEVMHARVVTDRVTGFSKGFGFVRYASVEDASKG 105
Query: 80 VEEMNGEFL 88
+E M+G+FL
Sbjct: 106 IEGMDGKFL 114
>gi|351697087|gb|EHB00006.1| Putative RNA-binding protein 23 [Heterocephalus glaber]
Length = 436
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 24 RLFILCGK-DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
RL++ C ++TED LR F PFG I+ I +KD TG SKG +I FS++ A +AVE+
Sbjct: 264 RLYVGCLHFNITEDMLRGIFEPFGKIENIVLMKDSETGHSKGYGFITFSESECARRAVEQ 323
Query: 83 MNGEFLPNHSKPIKV 97
+NG L +P++V
Sbjct: 324 LNGFELAG--RPMRV 336
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G + ++R + DRN+ SKG+AY+ F A+
Sbjct: 181 DLEDFFSAIGKVHDVRIISDRNSRRSKGIAYVEFCDIQSVPLAI 224
>gi|256052032|ref|XP_002569583.1| bruno-like rna binding protein [Schistosoma mansoni]
gi|350646169|emb|CCD59153.1| bruno-like rna binding protein [Schistosoma mansoni]
Length = 682
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 24 RLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LF+ + GK TE D++ F+P+G I+E ++D+N G SKG A+++FS ++EAA A++
Sbjct: 101 KLFVGMLGKHQTEKDIQNLFAPYGLIEECTILRDQN-GLSKGCAFVKFSSSTEAANAIDH 159
Query: 83 M-NGEFLPNHSKPIKVLIA 100
M N + + S P+ V A
Sbjct: 160 MHNSQTMQGASSPLVVKFA 178
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 20 PPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
P LFI ++ +++L Q F PFG + + DR T +SK ++ F + A
Sbjct: 594 PEGCNLFIYHLPQEFGDNELAQMFMPFGTVISAKVYVDRATNQSKCFGFVSFDNHTSAQN 653
Query: 79 AVEEMNG 85
A++ MNG
Sbjct: 654 AIQAMNG 660
>gi|124513886|ref|XP_001350299.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23615716|emb|CAD52708.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 509
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 22 HSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
++LFI K++TED++++ FSP+G ++E+ +KD +TG KG ++++FS +A A+
Sbjct: 183 QAKLFIGSLPKNITEDNIKEMFSPYGTVEEVFIMKDNSTGLGKGCSFVKFSYKEQALYAI 242
Query: 81 EEMNG-EFLPNHSKPIKVLIA 100
+ +NG + L ++P++V A
Sbjct: 243 KSLNGKKTLEGCTRPVEVRFA 263
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 4 NYRINTHDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
N N H+ S + PP + LFI + + DL Q FSPFG + R ++NTG +
Sbjct: 352 NNSANMHNLSE--SSGPPGANLFIFHVPNEWQQTDLIQAFSPFGELLSARIATEKNTGRN 409
Query: 63 KGVAYIRFSKTSEAAKAVEEMNG 85
+G A++ + AA A+ +MNG
Sbjct: 410 RGFAFVSYDSLESAAAAISQMNG 432
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 24 RLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI K++ ED LR F +G + E+ ++D+ T K A+++ + SEA A+
Sbjct: 86 KLFIGRVPKNIEEDQLRPIFEEYGIVNEVVIIRDKITNVHKSSAFVKMASISEADNAIRL 145
Query: 83 MNGE 86
+N +
Sbjct: 146 LNNQ 149
>gi|218200448|gb|EEC82875.1| hypothetical protein OsI_27755 [Oryza sativa Indica Group]
Length = 141
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 21 PHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
P LFI K T D L++ F+ FG + R V DR TG SKG +IR++ +AAK
Sbjct: 34 PSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFIRYATVEDAAKG 93
Query: 80 VEEMNGEFL 88
+E M+G+FL
Sbjct: 94 IEGMDGKFL 102
>gi|326474784|gb|EGD98793.1| glycine-rich RNA-binding protein [Trichophyton tonsurans CBS
112818]
Length = 149
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 20 PPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
PP +LFI T+D LR+GFS FG I+E VKDR+T S+G ++RFS SEA
Sbjct: 3 PP--KLFIGGLAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADA 60
Query: 79 AVEEMNGE 86
A+ MN +
Sbjct: 61 ALNAMNNQ 68
>gi|307106841|gb|EFN55086.1| hypothetical protein CHLNCDRAFT_24218 [Chlorella variabilis]
Length = 91
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%)
Query: 29 CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
+DVTEDDL F PFG IQ I KDR TGES+G A+I F +A +A+ +++G
Sbjct: 15 LSEDVTEDDLADLFGPFGPIQRIFVAKDRETGESRGFAFINFIHREDALRAISKLDG 71
>gi|294884851|gb|ADF47436.1| trinucleotide repeat containing 4-like protein [Dugesia japonica]
Length = 460
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 24 RLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI + GK TEDD+R F PFG I+E ++D+N G SKG A+++++ SEA A+
Sbjct: 50 KLFIGMLGKQHTEDDVRDMFKPFGMIEECTILRDQN-GNSKGCAFVKYTTRSEAYTAIGA 108
Query: 83 MNGEF-LPNHSKPIKVLIA 100
M+G +P S + V A
Sbjct: 109 MHGSMTIPGASSSLVVKFA 127
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 20 PPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
P S +FI ++ + +L Q FSPFG + + DR T +SK ++ F ++ A
Sbjct: 370 PDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQA 429
Query: 79 AVEEMNG 85
A++ MNG
Sbjct: 430 AIQAMNG 436
>gi|195110141|ref|XP_001999640.1| GI22960 [Drosophila mojavensis]
gi|193916234|gb|EDW15101.1| GI22960 [Drosophila mojavensis]
Length = 475
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+D+ ++N T + D H +F+ ++ + LR+ F+PFG I R V+D
Sbjct: 71 LDKEIKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDP 130
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
+T +SKG A++ F K +EA A++ MNG+++
Sbjct: 131 HTMKSKGYAFVSFVKKAEAENAIQSMNGQWI 161
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 10 HDRSREYNDEPPHSRLFILCG---KDVTEDDL-RQGFSPFGNIQEIRCVKDRNTGESKGV 65
H YN P + + CG +V D+L + F FG IQ++R KD KG
Sbjct: 210 HTFEEVYNQSSP-TNTTVYCGGFPPNVISDELMHKHFMQFGPIQDVRVFKD------KGF 262
Query: 66 AYIRFSKTSEAAKAVEEM-NGEFLPNHSK 93
A+I+F AA+A+E N E NH K
Sbjct: 263 AFIKFVTKEAAARAIEHTHNSEVHGNHVK 291
>gi|121705230|ref|XP_001270878.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
gi|119399024|gb|EAW09452.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
Length = 133
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 23 SRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
S+LFI T+D LRQGF FG ++E VKDR+T S+G ++RFS S+A KA++
Sbjct: 2 SKLFIGGLAWHTTDDALRQGFEQFGQVEEAIVVKDRDTNRSRGFGFVRFSSDSDADKAMD 61
Query: 82 EMNGE 86
MN +
Sbjct: 62 AMNNQ 66
>gi|37681959|gb|AAQ97857.1| TIA1 cytotoxic granule-associated RNA binding protein [Danio rerio]
gi|160773363|gb|AAI55270.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ +++ DD+R F+PFG I + R V+D TG+SKG +I F
Sbjct: 87 SSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVRDLATGKSKGYGFISFI 146
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+++MNG++L
Sbjct: 147 NKWDAESAIQQMNGQWL 163
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 23 SRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
S + CG +++ +RQ FSPFG I EIR + KG +++RF AA A
Sbjct: 204 SNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFDSHEGAAHA 257
Query: 80 VEEMNGEFLPNHS 92
+ +NG + H+
Sbjct: 258 IVSVNGTCIEGHT 270
>gi|108383479|gb|ABF85732.1| IP09238p [Drosophila melanogaster]
Length = 791
Score = 60.1 bits (144), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 8 NTHDRSREYNDEPP-HSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESK 63
+ D E PP H + I G ++ LR+ F+PFG I + R V+D T +SK
Sbjct: 434 DMEDSDEEMEYMPPLHKQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSK 493
Query: 64 GVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
G ++ F K SEA A+ MNG++L + S
Sbjct: 494 GYGFVSFIKKSEAESAITAMNGQWLGSRS 522
Score = 40.8 bits (94), Expect = 0.59, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
++E+ L++ F+P+G IQEIR KD KG A++RFS A A+
Sbjct: 570 LSEEVLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAI 611
>gi|442621490|ref|NP_001097951.2| CG34362, isoform B, partial [Drosophila melanogaster]
gi|440217976|gb|AAF56772.4| CG34362, isoform B, partial [Drosophila melanogaster]
Length = 792
Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 8 NTHDRSREYNDEPP-HSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESK 63
+ D E PP H + I G ++ LR+ F+PFG I + R V+D T +SK
Sbjct: 442 DMEDSDEEMEYMPPLHKQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSK 501
Query: 64 GVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
G ++ F K SEA A+ MNG++L + S
Sbjct: 502 GYGFVSFIKKSEAESAITAMNGQWLGSRS 530
Score = 40.8 bits (94), Expect = 0.60, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
++E+ L++ F+P+G IQEIR KD KG A++RFS A A+
Sbjct: 578 LSEEVLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAI 619
>gi|327301915|ref|XP_003235650.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
gi|326463002|gb|EGD88455.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
Length = 149
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 20 PPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
PP +LFI T+D LR+GFS FG I+E VKDR+T S+G ++RFS SEA
Sbjct: 3 PP--KLFIGGLAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADA 60
Query: 79 AVEEMNGE 86
A+ MN +
Sbjct: 61 ALNAMNNQ 68
>gi|442621493|ref|NP_001163754.2| CG34362, isoform D, partial [Drosophila melanogaster]
gi|440217977|gb|ACZ95048.2| CG34362, isoform D, partial [Drosophila melanogaster]
Length = 799
Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 8 NTHDRSREYNDEPP-HSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESK 63
+ D E PP H + I G ++ LR+ F+PFG I + R V+D T +SK
Sbjct: 442 DMEDSDEEMEYMPPLHKQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSK 501
Query: 64 GVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
G ++ F K SEA A+ MNG++L + S
Sbjct: 502 GYGFVSFIKKSEAESAITAMNGQWLGSRS 530
Score = 40.8 bits (94), Expect = 0.60, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
++E+ L++ F+P+G IQEIR KD KG A++RFS A A+
Sbjct: 578 LSEEVLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAI 619
>gi|400601281|gb|EJP68924.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 368
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 60/104 (57%), Gaps = 10/104 (9%)
Query: 10 HDRSREYNDE------PPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
H +++ DE P H RLF+ G + T+D L + FS +G++Q+ R ++D+ T +S
Sbjct: 213 HGGGKKWTDESLLEWDPSHLRLFVGNLGGETTDDALLKAFSRWGSVQKARVIRDKRTSKS 272
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIAAKLEFK 106
KG ++ FS + +A +EMN +++ N +P+ V+ A E K
Sbjct: 273 KGYGFVSFSDADDFFQAAKEMNNKYIQN--RPV-VVRKANTEIK 313
>gi|358346231|ref|XP_003637173.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355503108|gb|AES84311.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 622
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 32/165 (19%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K + E+ L++ FS FG I + + D G SKGV ++ F+ EA+KA++EMNG+ +
Sbjct: 313 KSLNEEKLKELFSEFGTITSCKVMSDAR-GRSKGVGFVAFTTPEEASKAIDEMNGKII-- 369
Query: 91 HSKPIKVLIAAKLEFKE-------------GYRGGQKISVQYTSPQSAAYARDKF----- 132
KP+ V +A + E ++ G G SVQ +PQ Y + F
Sbjct: 370 GQKPVYVSVAQRKEERKAQLQAHFPAIQVSGGNAGYHSSVQRLAPQQFYYEQGTFDLMAP 429
Query: 133 --HGFAYPPGI-----PMVVVPDF--SYGLPRNG--ASALGGNAA 166
+G+ + P P V P++ Y L R G + +GG A
Sbjct: 430 QPNGYGFRPKFMSDVGPGFVTPNYLLPYHLQRQGHPGNRMGGRPA 474
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 34 TEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
T +DL+Q F+ FG I ++ +KD N G SK ++ F + AA AVE++NG
Sbjct: 212 TNEDLKQLFNTFGVITSVKIMKDEN-GNSKRFGFVNFQSSDSAATAVEKLNG 262
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 38 LRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
L + FS FGN+ + D N G SKG +++F A A+E+++G +
Sbjct: 129 LHETFSVFGNVLSCKVAMDSN-GHSKGHGFVQFDNDQSAKNAIEKLDGRLM 178
>gi|328773103|gb|EGF83140.1| hypothetical protein BATDEDRAFT_34010 [Batrachochytrium
dendrobatidis JAM81]
Length = 718
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 13/112 (11%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ + ++ LRQ FS FG I + + D TG SKG ++ FS EA KAV EMN L N
Sbjct: 357 ESIDDEKLRQEFSVFGAITSTKIMVDEKTGISKGFGFVCFSNPDEATKAVTEMNNRMLAN 416
Query: 91 HSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPGIP 142
KPI V +A + E + Q+++ Q Q A A + PPG P
Sbjct: 417 --KPIYVALAQRKEVRR-----QQLAAQMQ--QRAMRAHQQM----MPPGYP 455
>gi|194742700|ref|XP_001953839.1| GF17967 [Drosophila ananassae]
gi|190626876|gb|EDV42400.1| GF17967 [Drosophila ananassae]
Length = 471
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+D+ ++N T ++ D H +F+ ++ + LR+ F+PFG I R V+D
Sbjct: 71 LDKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDP 130
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
+T +SKG A++ F K +EA A+ MNG+++
Sbjct: 131 HTMKSKGYAFVSFVKKAEAENAITAMNGQWI 161
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 10 HDRSREYNDEPPHSRLFILCG---KDVTEDDL-RQGFSPFGNIQEIRCVKDRNTGESKGV 65
H YN P + + CG +V DDL + F FG IQ++R KD KG
Sbjct: 208 HTFEEVYNQSSP-TNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD------KGF 260
Query: 66 AYIRFSKTSEAAKAVEEM-NGEFLPNHSK 93
A+I+F AA+A+E N E N K
Sbjct: 261 AFIKFVTKEAAARAIEHTHNSEVHGNQVK 289
>gi|332029758|gb|EGI69627.1| ELAV-like protein 2 [Acromyrmex echinatior]
Length = 359
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++ + DL FSP+G I R + D TG SKGV +IRF + EA +A++E+NG
Sbjct: 123 KNMAQQDLENLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRVEAERAIQELNGTIPKG 182
Query: 91 HSKPIKVLIA 100
S+PI V A
Sbjct: 183 SSEPITVKFA 192
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ ++D T + KG ++ + EA A++ +NG L N
Sbjct: 286 ETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSLNGYTLGN 344
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+D++R FS G ++ + ++D+ +G+S G ++ + + +A KA+ +NG L N
Sbjct: 37 QSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRPEDAEKAINTLNGLRLQN 96
Query: 91 HSKPIKV 97
K IKV
Sbjct: 97 --KTIKV 101
>gi|255580168|ref|XP_002530915.1| RNA binding protein, putative [Ricinus communis]
gi|223529509|gb|EEF31464.1| RNA binding protein, putative [Ricinus communis]
Length = 354
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKG 64
+ NT +RE P++ LF+ K T + L+Q FS FG + + R V DR +G SKG
Sbjct: 37 QANTAPSARE--QAEPNTNLFVSGLSKRTTTEGLKQAFSKFGEVVQARVVTDRVSGYSKG 94
Query: 65 VAYIRFSKTSEAAKAVEEMNGEFL 88
++R+ +A K +E M+G+FL
Sbjct: 95 FGFVRYGSLEDAEKGIEGMDGKFL 118
>gi|195400098|ref|XP_002058655.1| GJ14540 [Drosophila virilis]
gi|194142215|gb|EDW58623.1| GJ14540 [Drosophila virilis]
Length = 472
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+D+ ++N T + D H +F+ ++ + LR+ F+PFG I R V+D
Sbjct: 71 LDKEIKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDP 130
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
T +SKG A++ F K +EA A++ MNG+++
Sbjct: 131 QTMKSKGYAFVSFVKKAEAENAIQAMNGQWI 161
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 10 HDRSREYNDEPPHSRLFILCG---KDVTEDDL-RQGFSPFGNIQEIRCVKDRNTGESKGV 65
H YN P + + CG +V D+L + F FG IQ++R KD KG
Sbjct: 209 HTFEEVYNQSSP-TNTTVYCGGFPPNVISDELMHKHFMQFGPIQDVRVFKD------KGF 261
Query: 66 AYIRFSKTSEAAKAVEEM-NGEFLPNHSK 93
A+I+F AA+A+E N E NH K
Sbjct: 262 AFIKFVSKEAAARAIEHTHNSEVHGNHVK 290
>gi|348542282|ref|XP_003458614.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oreochromis
niloticus]
Length = 386
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 18 DEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ ++T DD++ F+PFG I + R VKD TG+SKG ++ F +A
Sbjct: 90 DTSSHFHVFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDA 149
Query: 77 AKAVEEMNGEFL 88
A+++M G++L
Sbjct: 150 ENAIQQMGGQWL 161
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Query: 17 NDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
N P S + CG +TE +RQ FSPFG I EIR + KG +++RF+
Sbjct: 196 NQSSP-SNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPE------KGYSFVRFNSH 248
Query: 74 SEAAKAVEEMNG 85
AA A+ +NG
Sbjct: 249 EAAAHAIVSVNG 260
>gi|119177425|ref|XP_001240490.1| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
gi|320032129|gb|EFW14085.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
gi|392867546|gb|EAS29215.2| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
Length = 147
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 23 SRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
S+LFI T++ LRQGFS FG+I+E VKDR+T S+G ++RF+ EA A+
Sbjct: 2 SKLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMN 61
Query: 82 EMNGEFLPNHSKPIKVLIAA 101
EMN + + I+V AA
Sbjct: 62 EMNNQEFD--GRTIRVDKAA 79
>gi|328859425|gb|EGG08534.1| hypothetical protein MELLADRAFT_84729 [Melampsora larici-populina
98AG31]
Length = 649
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 17 NDEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
ND ++RL++ ++T+DDLRQ F PFG+I+ + +D+ TG+SKG A+++F +
Sbjct: 427 NDPNSYARLYVGSLNFNLTDDDLRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHD 486
Query: 76 AAKAVEEMNG 85
A A+E+MNG
Sbjct: 487 AKNAMEKMNG 496
>gi|322798581|gb|EFZ20185.1| hypothetical protein SINV_01390 [Solenopsis invicta]
Length = 523
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++ + DL FSP+G I R + D TG SKGV +IRF + EA +A++E+NG
Sbjct: 122 KNMAQQDLENLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRVEAERAIQELNGTIPKG 181
Query: 91 HSKPIKVLIA 100
S+PI V A
Sbjct: 182 SSEPITVKFA 191
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ ++D T + KG ++ + EA A++ +NG L N
Sbjct: 262 ETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSLNGYTLGN 320
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+D++R FS G ++ + ++D+ +G+S G ++ + + +A KA+ +NG L N
Sbjct: 36 QSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRPEDAEKAINTLNGLRLQN 95
Query: 91 HSKPIKV 97
K IKV
Sbjct: 96 --KTIKV 100
>gi|307194503|gb|EFN76795.1| ELAV-like protein 2 [Harpegnathos saltator]
Length = 349
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++ + DL FSP+G I R + D TG SKGV +IRF + EA +A++E+NG
Sbjct: 122 KNMAQQDLENLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRVEAERAIQELNGTIPKG 181
Query: 91 HSKPIKVLIA 100
S+PI V A
Sbjct: 182 SSEPITVKFA 191
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ ++D T + KG ++ + EA A++ +NG L N
Sbjct: 276 ETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSLNGYTLGN 334
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+D++R FS G ++ + ++D+ +G+S G ++ + + +A KA+ +NG L N
Sbjct: 36 QSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRPEDAEKAISTLNGLRLQN 95
Query: 91 HSKPIKV 97
K IKV
Sbjct: 96 --KTIKV 100
>gi|195037090|ref|XP_001989998.1| GH19101 [Drosophila grimshawi]
gi|193894194|gb|EDV93060.1| GH19101 [Drosophila grimshawi]
Length = 476
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+D+ ++N T + D H +F+ ++ + LR+ F+PFG I R V+D
Sbjct: 71 LDKEIKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDP 130
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
T +SKG A++ F K +EA A++ MNG+++
Sbjct: 131 QTMKSKGYAFVSFVKKAEAENAIQAMNGQWI 161
>gi|388493798|gb|AFK34965.1| unknown [Medicago truncatula]
Length = 185
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 21 PHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
P+ +F+ K T + LR+ F FG ++++R V DR +G SKG Y+R++ + +AAK
Sbjct: 42 PNEIVFVTGLNKRTTSETLREAFKKFGEVKQVRVVADRVSGYSKGFGYVRYATSEDAAKG 101
Query: 80 VEEMNGEFL 88
++ M+G+FL
Sbjct: 102 IQGMDGKFL 110
>gi|115474735|ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|38636774|dbj|BAD03017.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|215767574|dbj|BAG99802.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222639884|gb|EEE68016.1| hypothetical protein OsJ_25986 [Oryza sativa Japonica Group]
Length = 141
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 21 PHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
P LFI K T D L++ F+ FG + R V DR TG SKG ++R++ +AAK
Sbjct: 34 PSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAKG 93
Query: 80 VEEMNGEFL 88
+E M+G+FL
Sbjct: 94 IEGMDGKFL 102
>gi|303315989|ref|XP_003067999.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
gi|240107675|gb|EER25854.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
Length = 117
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 23 SRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
S+LFI T++ LRQGFS FG+I+E VKDR+T S+G ++RF+ EA A+
Sbjct: 2 SKLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMN 61
Query: 82 EMNGE 86
EMN +
Sbjct: 62 EMNNQ 66
>gi|432884715|ref|XP_004074554.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 18 DEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ ++T DD++ F+PFG I + R VKD TG+SKG ++ F +A
Sbjct: 90 DTSSHFHVFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDA 149
Query: 77 AKAVEEMNGEFL 88
A+++M G++L
Sbjct: 150 ENAIQQMGGQWL 161
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 23 SRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
S + CG +TE +RQ FSPFG I EIR + KG +++RF+ AA A
Sbjct: 201 SNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPE------KGYSFVRFNSHEAAAHA 254
Query: 80 VEEMNG 85
+ +NG
Sbjct: 255 IVSVNG 260
>gi|322696870|gb|EFY88656.1| RNP domain protein [Metarhizium acridum CQMa 102]
Length = 364
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 55/90 (61%), Gaps = 6/90 (6%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G + T+D L + F+P+ ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 211 DPAHLRLFVGNLAG-ETTDDSLLKAFAPWKSVQKARVIRDKRTNKSKGYGFVSFSDADDF 269
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAAKLEFK 106
A + MNG+++ +H P+ ++ A E K
Sbjct: 270 FNAAKTMNGQYIQSH--PV-IVKKANTEIK 296
>gi|331242735|ref|XP_003334013.1| RNA-binding protein rsd1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 546
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 17 NDEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
ND ++RL++ ++T+DD+RQ F PFG+I+ + +D+ TG+SKG A+++F +
Sbjct: 418 NDPNSYARLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHD 477
Query: 76 AAKAVEEMNG 85
A A+E+MNG
Sbjct: 478 AKNAMEKMNG 487
>gi|195331490|ref|XP_002032434.1| GM23518 [Drosophila sechellia]
gi|194121377|gb|EDW43420.1| GM23518 [Drosophila sechellia]
Length = 464
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+++ ++N T ++ D H +F+ ++ + LR+ F+PFG I R V+D
Sbjct: 71 LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDP 130
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
+T +SKG A++ F K +EA A++ MNG+++
Sbjct: 131 HTMKSKGYAFVSFVKKAEAENAIQAMNGQWI 161
>gi|24649513|ref|NP_732942.1| Rox8, isoform B [Drosophila melanogaster]
gi|24649515|ref|NP_732943.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301090|gb|AAF56224.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301091|gb|AAF56225.1| Rox8, isoform B [Drosophila melanogaster]
Length = 464
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 22 HSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
H +F+ ++ + LR+ F+PFG I R V+D +T +SKG A++ F K +EA A+
Sbjct: 94 HHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAI 153
Query: 81 EEMNGEFL 88
+ MNG+++
Sbjct: 154 QAMNGQWI 161
>gi|17944383|gb|AAL48083.1| RE71384p [Drosophila melanogaster]
Length = 470
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+++ ++N T ++ D H +F+ ++ + LR+ F+PFG I R V+D
Sbjct: 71 LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDP 130
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
+T +SKG A++ F K +EA A++ MNG+++
Sbjct: 131 HTMKSKGYAFVSFVKKAEAENAIQAMNGQWI 161
>gi|24649519|ref|NP_732945.1| Rox8, isoform D [Drosophila melanogaster]
gi|442620772|ref|NP_732944.2| Rox8, isoform E [Drosophila melanogaster]
gi|442620774|ref|NP_001262897.1| Rox8, isoform G [Drosophila melanogaster]
gi|442620776|ref|NP_001262898.1| Rox8, isoform H [Drosophila melanogaster]
gi|23172126|gb|AAN13978.1| Rox8, isoform D [Drosophila melanogaster]
gi|211938549|gb|ACJ13171.1| FI04408p [Drosophila melanogaster]
gi|440217818|gb|AAN13977.2| Rox8, isoform E [Drosophila melanogaster]
gi|440217819|gb|AGB96277.1| Rox8, isoform G [Drosophila melanogaster]
gi|440217820|gb|AGB96278.1| Rox8, isoform H [Drosophila melanogaster]
Length = 470
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 22 HSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
H +F+ ++ + LR+ F+PFG I R V+D +T +SKG A++ F K +EA A+
Sbjct: 94 HHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAI 153
Query: 81 EEMNGEFL 88
+ MNG+++
Sbjct: 154 QAMNGQWI 161
>gi|357620619|gb|EHJ72759.1| hypothetical protein KGM_08042 [Danaus plexippus]
Length = 423
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 22 HSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
+ RLFI KD +E +LR FS FG I+ I +D+ T KG AY+++ +AAKA E
Sbjct: 32 YRRLFIKVQKDASESELRHHFSTFGQIESIHLQRDKVTDTCKGFAYVQYKTFYDAAKAFE 91
Query: 82 EMNGEFLPNHSKP 94
E + ++ P + P
Sbjct: 92 ECDKKYRPVFATP 104
>gi|410929559|ref|XP_003978167.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 385
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 18 DEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ ++T DD++ F PFG I + R VKD TG+SKG ++ F +A
Sbjct: 90 DTSSHFHVFVGDLSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDA 149
Query: 77 AKAVEEMNGEFL 88
A+++M G++L
Sbjct: 150 ENAIQQMGGQWL 161
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 17 NDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
N P S + CG +TE +RQ FSPFG+I EIR D KG +++RF+
Sbjct: 196 NQSSP-SNCTVYCGGVTTGLTEQIMRQTFSPFGHIMEIRVFPD------KGYSFVRFNSH 248
Query: 74 SEAAKAVEEMNG 85
AA A+ +NG
Sbjct: 249 EAAAHAIVSVNG 260
>gi|7446337|pir||T15542 hypothetical protein C18A3.5 - Caenorhabditis elegans
Length = 448
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 18 DEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ +V LR+ F PFG++ + + ++D NT +SKG ++ + K EA
Sbjct: 170 DTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEA 229
Query: 77 AKAVEEMNGEFL 88
+A+E+MNG++L
Sbjct: 230 ERAIEQMNGQWL 241
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 6/54 (11%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGE 86
+TED++RQGF+ FG I E+R K +G A+++F AAKA+ +MN +
Sbjct: 291 LTEDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKAIVQMNNQ 338
>gi|449448655|ref|XP_004142081.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 146
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 24 RLFILCGKDVTEDD-LRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI +T D+ LR+ FS FG + + + V DR TG SKG A++ +S EA KA EE
Sbjct: 41 KLFISGLSRLTTDEKLREAFSSFGQLVDAKVVTDRATGRSKGFAFVTYSTIDEAEKAREE 100
Query: 83 MNGEFL 88
MN +FL
Sbjct: 101 MNAKFL 106
>gi|17531965|ref|NP_495121.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
gi|373219010|emb|CCD65015.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
Length = 408
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 18 DEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ +V LR+ F PFG++ + + ++D NT +SKG ++ + K EA
Sbjct: 130 DTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEA 189
Query: 77 AKAVEEMNGEFL 88
+A+E+MNG++L
Sbjct: 190 ERAIEQMNGQWL 201
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 6/54 (11%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGE 86
+TED++RQGF+ FG I E+R K +G A+++F AAKA+ +MN +
Sbjct: 251 LTEDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKAIVQMNNQ 298
>gi|32564504|ref|NP_495123.2| Protein TIAR-1, isoform e [Caenorhabditis elegans]
gi|373219013|emb|CCD65018.1| Protein TIAR-1, isoform e [Caenorhabditis elegans]
Length = 305
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 18 DEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ +V LR+ F PFG++ + + ++D NT +SKG ++ + K EA
Sbjct: 27 DTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEA 86
Query: 77 AKAVEEMNGEFL 88
+A+E+MNG++L
Sbjct: 87 ERAIEQMNGQWL 98
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 6/54 (11%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGE 86
+TED++RQGF+ FG I E+R K +G A+++F AAKA+ +MN +
Sbjct: 148 LTEDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKAIVQMNNQ 195
>gi|242777340|ref|XP_002479014.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
gi|218722633|gb|EED22051.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
Length = 381
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G +VT+D L++ FS + +IQ+ R ++D+ T +SKG ++ FS +
Sbjct: 248 DPAHFRLFVGNLAG-EVTDDSLKKAFSRYPSIQKARVIRDKRTEKSKGYGFVSFSDGDDY 306
Query: 77 AKAVEEMNGEFLPNH 91
KA EM G+++ +H
Sbjct: 307 FKAAREMQGKYIGSH 321
>gi|32564506|ref|NP_871980.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
gi|373219014|emb|CCD65019.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
Length = 295
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 18 DEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ +V LR+ F PFG++ + + ++D NT +SKG ++ + K EA
Sbjct: 17 DTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEA 76
Query: 77 AKAVEEMNGEFL 88
+A+E+MNG++L
Sbjct: 77 ERAIEQMNGQWL 88
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 6/54 (11%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGE 86
+TED++RQGF+ FG I E+R K +G A+++F AAKA+ +MN +
Sbjct: 138 LTEDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKAIVQMNNQ 185
>gi|308493359|ref|XP_003108869.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
gi|308247426|gb|EFO91378.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
Length = 404
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 18 DEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ +V LR+ F PFG++ + + ++D NT +SKG ++ + K EA
Sbjct: 128 DTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEA 187
Query: 77 AKAVEEMNGEFL 88
+A+E+MNG++L
Sbjct: 188 ERAIEQMNGQWL 199
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 22 HSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
++ +++ +++ED++RQ F+ +G I E+R K +G A+++F AAKA+
Sbjct: 238 NTSVYVGNIANLSEDEIRQAFASYGRISEVRIFK------MQGYAFVKFDNKDAAAKAIV 291
Query: 82 EMNGE 86
+MN +
Sbjct: 292 QMNNQ 296
>gi|300121123|emb|CBK21504.2| unnamed protein product [Blastocystis hominis]
Length = 302
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 14 REYNDEPPHSRL----FILCGK--------DVTEDDLRQGFSPFGNIQEIRCVKDRNTGE 61
+E D P H + FI K V +D LRQ FS +GN++E +KDR +G+
Sbjct: 88 KENKDRPQHEQAAPKEFIDTNKIIITSLAWSVNDDSLRQAFSKYGNLEECTVLKDRQSGK 147
Query: 62 SKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLI 99
S+G +RF+ KA+EEMNG L + ++ +
Sbjct: 148 SRGRGIVRFATEEAMKKAIEEMNGTELEGRAIAVRQFL 185
>gi|449516497|ref|XP_004165283.1| PREDICTED: glycine-rich RNA-binding protein 2-like, partial
[Cucumis sativus]
Length = 100
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
T++ LR+ FS FG + + + V DR TG SKG A++ +S EA KA EEMN +FL
Sbjct: 5 TTDEKLREAFSSFGQLADAKVVTDRATGRSKGFAFVTYSTIDEAEKAREEMNAKFL 60
>gi|242021493|ref|XP_002431179.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
gi|212516428|gb|EEB18441.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
Length = 403
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+++ ++N T ++ D H +F+ ++ LR+ F+PFG I R V+D
Sbjct: 74 LEKEIKVNWATSPGNQPKQDTSSHHHIFVGDLSPEIEMHTLREAFAPFGEISNCRIVRDP 133
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
T +SKG A++ F K +EA A+ MNG++L N S
Sbjct: 134 QTLKSKGYAFVSFVKKAEAESAIHAMNGQWLGNRS 168
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Query: 16 YNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
YN P + + CG + ED + + FS FG IQ+IR KD KG A+IRFS
Sbjct: 200 YNQSSP-TNCTVYCGGFTNGINEDLIEKAFSRFGTIQDIRSFKD------KGYAFIRFST 252
Query: 73 TSEAAKAVEEMN 84
A A+E M+
Sbjct: 253 KEAATHAIEAMH 264
>gi|322708601|gb|EFZ00178.1| RNP domain protein [Metarhizium anisopliae ARSEF 23]
Length = 365
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G + T+D L + F+P+ ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 212 DPAHLRLFVGNLAG-ETTDDSLLKAFAPWKSVQKARVIRDKRTNKSKGYGFVSFSDADDF 270
Query: 77 AKAVEEMNGEFLPNH 91
A + MNG+++ +H
Sbjct: 271 FNAAKTMNGQYIQSH 285
>gi|392402152|ref|YP_006438764.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
gi|390610106|gb|AFM11258.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
Length = 117
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG------E 86
VTE DL+Q FS FG +Q + + DR+TG KG A++ SE KA+ MNG E
Sbjct: 12 VTEQDLKQAFSEFGTVQSAKMIMDRDTGRPKGFAFVEMENKSEGIKAISGMNGRSMNDRE 71
Query: 87 FLPNHSKP 94
+ N ++P
Sbjct: 72 IVVNEARP 79
>gi|17531963|ref|NP_495120.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
gi|373219011|emb|CCD65016.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
Length = 376
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 18 DEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ +V LR+ F PFG++ + + ++D NT +SKG ++ + K EA
Sbjct: 98 DTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEA 157
Query: 77 AKAVEEMNGEFL 88
+A+E+MNG++L
Sbjct: 158 ERAIEQMNGQWL 169
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 6/54 (11%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGE 86
+TED++RQGF+ FG I E+R K +G A+++F AAKA+ +MN +
Sbjct: 219 LTEDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKAIVQMNNQ 266
>gi|440796160|gb|ELR17269.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1122
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 23 SRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
S +F+ GKDV E DL F+ G I EIR +KD TGESKG A++RF+ A AV+
Sbjct: 401 SEVFVGGLGKDVNEADLYSAFANVGEIFEIRLMKDATTGESKGYAFVRFTSPKFAKLAVQ 460
Query: 82 EMNGEFL 88
+++G L
Sbjct: 461 QVDGAVL 467
>gi|341900388|gb|EGT56323.1| CBN-TIAR-1 protein [Caenorhabditis brenneri]
Length = 399
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 18 DEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ +V LR+ F PFG++ + + ++D NT +SKG ++ + K EA
Sbjct: 126 DTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEA 185
Query: 77 AKAVEEMNGEFL 88
+A+E+MNG++L
Sbjct: 186 ERAIEQMNGQWL 197
Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGE 86
+++E+D+RQ F+ +G I E+R K +G A+++F AAKA+ +MN +
Sbjct: 246 NLSEEDIRQAFASYGRISEVRIFK------MQGYAFVKFDNKDAAAKAIVQMNNQ 294
>gi|302755434|ref|XP_002961141.1| hypothetical protein SELMODRAFT_9015 [Selaginella moellendorffii]
gi|302766900|ref|XP_002966870.1| hypothetical protein SELMODRAFT_9013 [Selaginella moellendorffii]
gi|300164861|gb|EFJ31469.1| hypothetical protein SELMODRAFT_9013 [Selaginella moellendorffii]
gi|300172080|gb|EFJ38680.1| hypothetical protein SELMODRAFT_9015 [Selaginella moellendorffii]
Length = 77
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 35 EDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKP 94
++ LR F PFG I+E++ ++DRNTG SKG +++F + A +AV MNG + + +
Sbjct: 14 DESLRSLFCPFGQIEEVKVIRDRNTGASKGYGFVKFCDAACAVQAVHHMNGWKVEDKTLA 73
Query: 95 IKV 97
++V
Sbjct: 74 VRV 76
>gi|195445204|ref|XP_002070221.1| GK11939 [Drosophila willistoni]
gi|194166306|gb|EDW81207.1| GK11939 [Drosophila willistoni]
Length = 469
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+++ ++N T ++ D H +F+ ++ + LR+ F+PFG I R V+D
Sbjct: 71 LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDP 130
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
T +SKG A++ F K +EA A++ MNG+++
Sbjct: 131 QTMKSKGYAFVSFVKKAEAENAIQAMNGQWI 161
>gi|198431689|ref|XP_002121627.1| PREDICTED: similar to CUG triplet repeat, RNA binding protein 2
[Ciona intestinalis]
Length = 498
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 24 RLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI + K +TE DLRQ F PFGNI+E R + + + G SKG A++ +SK A A+
Sbjct: 109 KLFIGMISKKMTEQDLRQLFCPFGNIEECRILMNPD-GVSKGCAFVTYSKRVSAQNAIRN 167
Query: 83 MN-GEFLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQ 118
M+ + S PI V IA + KE + ++++Q
Sbjct: 168 MHQSTTMEGCSAPIVVKIADSPKDKERKKTQSQLAMQ 204
>gi|312370698|gb|EFR19033.1| hypothetical protein AND_23174 [Anopheles darlingi]
Length = 468
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 42/70 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++ + DL FSPFG I R + D TG SKGV +IRF + EA KA++E+NG
Sbjct: 261 KNMLQADLEALFSPFGRIITSRILCDNITGLSKGVGFIRFDQRMEAEKAIKELNGTVPKG 320
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 321 STEPITVKFA 330
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ +KD T + KG ++ + EA A++ +NG L N
Sbjct: 395 ETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGN 453
>gi|212533119|ref|XP_002146716.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
gi|210072080|gb|EEA26169.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
Length = 371
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G +VT+D L++ FS + +IQ+ R ++D+ T +S+G +I FS +
Sbjct: 235 DPAHFRLFVGNLAG-EVTDDSLKKAFSKYPSIQKARVIRDKRTEKSRGYGFISFSDGDDY 293
Query: 77 AKAVEEMNGEFLPNH 91
KA EM G+++ +H
Sbjct: 294 FKAGREMQGKYIGSH 308
>gi|119492333|ref|XP_001263582.1| glycine-rich RNA-binding protein, putative [Neosartorya fischeri
NRRL 181]
gi|119411742|gb|EAW21685.1| glycine-rich RNA-binding protein, putative [Neosartorya fischeri
NRRL 181]
Length = 118
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 23 SRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
S+LFI T+D LRQGF P+G ++E VKDR+T S+G ++RFS +EA A++
Sbjct: 2 SKLFIGGLAWHTTDDALRQGFEPYGVVEEAIVVKDRDTNRSRGFGFVRFSSDTEADAAMD 61
Query: 82 EMNGE 86
MN +
Sbjct: 62 AMNNQ 66
>gi|73965401|ref|XP_537585.2| PREDICTED: ELAV-like protein 1-like [Canis lupus familiaris]
Length = 326
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS F I R + D+ TG S+GVA+IRF K SEA +A+ NG P
Sbjct: 115 RTMTQKDVEDTFSRFWRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 84 NG 85
NG
Sbjct: 306 NG 307
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+D+LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFLNYVTAKDAERAINTLNG--LRL 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|375073685|gb|AFA34401.1| eif-3 eukaryotic translation intitiation factor 3 subunit 4,
partial [Ostrea edulis]
Length = 89
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
KD E DL++ F PFG IQ I KD+NTG+SKG A+I F + +AA+A+ ++G
Sbjct: 16 KDTRESDLQELFRPFGPIQRIYLAKDKNTGQSKGFAFINFHRREDAARAIAGVSG 70
>gi|242036137|ref|XP_002465463.1| hypothetical protein SORBIDRAFT_01g039290 [Sorghum bicolor]
gi|241919317|gb|EER92461.1| hypothetical protein SORBIDRAFT_01g039290 [Sorghum bicolor]
Length = 169
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 15 EYNDEPPHS--RLFILCGKDVTEDDLRQG-FSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
E + PP + +LF+ +T D+ QG F+PFG I E + V DR +G SKG ++R++
Sbjct: 53 EVANVPPLTTPKLFVSGLSRLTTDEKLQGAFAPFGRILEAKVVTDRVSGRSKGFGFVRYA 112
Query: 72 KTSEAAKAVEEMNGEFL 88
EA KA +EMN +FL
Sbjct: 113 TIEEAEKARQEMNAKFL 129
>gi|326432018|gb|EGD77588.1| hypothetical protein PTSG_08685 [Salpingoeca sp. ATCC 50818]
Length = 517
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 19 EPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
EP ++ + VTE DLR+ F PFG I+ I+ + DR T +S G ++ F EAA+
Sbjct: 81 EPRNNLIINYLPPSVTESDLRELFKPFGTIKAIKIMTDRYTHKSLGYGFVEFETAEEAAR 140
Query: 79 AVEEMNGEFLPNHSKPIKVLIA 100
A++ MNG N K +KV IA
Sbjct: 141 AIQAMNGRQYMN--KRLKVSIA 160
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +TED LR F+PFG I R + D + KG+A++RF K + A +AV E+N N
Sbjct: 179 RTITEDQLRAIFNPFGEIISARLLYDGDV--PKGIAFVRFDKRACAERAVAELNNTVPAN 236
Query: 91 HSKPIKVLIA 100
S+PI V A
Sbjct: 237 CSQPIAVKFA 246
>gi|404497479|ref|YP_006721585.1| RNA-binding protein [Geobacter metallireducens GS-15]
gi|418065178|ref|ZP_12702553.1| RNP-1 like RNA-binding protein [Geobacter metallireducens RCH3]
gi|78195083|gb|ABB32850.1| RNA-binding protein [Geobacter metallireducens GS-15]
gi|373562810|gb|EHP89017.1| RNP-1 like RNA-binding protein [Geobacter metallireducens RCH3]
Length = 134
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
+ TEDDLR+ F+ G + + + DR+TGE KG Y+R + EA +AVE ++G L N
Sbjct: 15 EATEDDLRRLFTVAGTVTSVHLITDRDTGEFKGCGYVRMATIEEAKEAVETLDGALLRN- 73
Query: 92 SKPIKVLIA 100
+ I V +A
Sbjct: 74 -RAITVTLA 81
>gi|157126547|ref|XP_001660922.1| hypothetical protein AaeL_AAEL010567 [Aedes aegypti]
gi|108873228|gb|EAT37453.1| AAEL010567-PA, partial [Aedes aegypti]
Length = 384
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ DL F P+G I R + D TG SKGV +IRF + SEA +A++++NG
Sbjct: 166 KSMTQQDLEALFQPYGQIITSRILCDNITGLSKGVGFIRFDQRSEAERAIQQLNGTTPKG 225
Query: 91 HSKPIKVLIA 100
S+PI V A
Sbjct: 226 ASEPITVKFA 235
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ +KD T + KG ++ + EA AV+ +NG L N
Sbjct: 309 ETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTNYDEAVVAVQSLNGYTLGN 367
>gi|125775095|ref|XP_001358799.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|195144954|ref|XP_002013461.1| GL24152 [Drosophila persimilis]
gi|54638540|gb|EAL27942.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|194102404|gb|EDW24447.1| GL24152 [Drosophila persimilis]
Length = 464
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 22 HSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
H +F+ ++ + LR+ F+PFG I R V+D T +SKG A++ F K +EA A+
Sbjct: 94 HHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAI 153
Query: 81 EEMNGEFL 88
+ MNG+++
Sbjct: 154 QAMNGQWI 161
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 11/79 (13%)
Query: 10 HDRSREYNDEPPHSRLFILCG---KDVTEDDL-RQGFSPFGNIQEIRCVKDRNTGESKGV 65
H YN P + + CG +V DDL + F FG IQ++R KD KG
Sbjct: 207 HTFDEVYNQSSP-TNTTVYCGGFPPNVISDDLMHKHFGQFGPIQDVRVFKD------KGF 259
Query: 66 AYIRFSKTSEAAKAVEEMN 84
A+I+F AA A+E +
Sbjct: 260 AFIKFVTKDSAAHAIEHTH 278
>gi|116792076|gb|ABK26221.1| unknown [Picea sitchensis]
Length = 151
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 14 REYNDEP--PHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRF 70
R + EP P +LF+ K T++ LR+ FS FG + E R V D+ G SKG A++R+
Sbjct: 36 RGMSTEPADPSPKLFVSGLSKRTTDEGLREAFSKFGRVLEARVVTDKMNGVSKGFAFVRY 95
Query: 71 SKTSEAAKAVEEMNGEFL 88
+ EA K E M+G+FL
Sbjct: 96 ATQEEADKGKEGMDGKFL 113
>gi|358333422|dbj|GAA51938.1| CUG-BP- and ETR3-like factor [Clonorchis sinensis]
Length = 849
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 24 RLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LF+ + GK TED+LR F+P+G+I+E ++D+N G SKG A+++F+ SEA A+E
Sbjct: 109 KLFVGMLGKQQTEDELRTLFAPYGSIEECTVLRDQN-GASKGCAFVKFTSNSEALSAIEG 167
Query: 83 M-NGEFLPNHSKPIKVLIA 100
+ N + + S P+ V A
Sbjct: 168 LHNSQTMQGASSPLVVKFA 186
Score = 40.4 bits (93), Expect = 0.73, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 20 PPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
P LFI ++ +++L Q F PFG + + DR T +SK ++ F + A
Sbjct: 712 PEGCNLFIYHLPQEFGDNELAQMFMPFGTVISAKVYVDRATNQSKCFGFVSFDNQTSAQN 771
Query: 79 AVEEMNG 85
A++ MNG
Sbjct: 772 AIQAMNG 778
>gi|296811816|ref|XP_002846246.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
gi|238843634|gb|EEQ33296.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
Length = 133
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 20 PPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
PP +LFI T+D LR GFS FG I+E VKDR+T S+G ++RFS SEA
Sbjct: 3 PP--KLFIGGLAWHTTDDTLRDGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSNESEADA 60
Query: 79 AVEEMNGE 86
A+ MN +
Sbjct: 61 ALNAMNNQ 68
>gi|158298951|ref|XP_319085.4| AGAP009952-PA [Anopheles gambiae str. PEST]
gi|157014134|gb|EAA13895.5| AGAP009952-PA [Anopheles gambiae str. PEST]
Length = 363
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++ + DL FSP+G I R + D TG SKGV +IRF + EA KA++E+NG
Sbjct: 144 KNMLQADLEALFSPYGRIITSRILCDNITGLSKGVGFIRFDQRMEAEKAIKELNGTVPKG 203
Query: 91 HSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAY----ARDKFHGFAYPPGIPMVVV 146
++PI V A S T P AAY A +F G + P +
Sbjct: 204 STEPITVKFA------------NNPSSTKTVPPLAAYLGPQAARRFPGPIHHPTGRFSAI 251
Query: 147 PDFSY 151
P++ Y
Sbjct: 252 PNYRY 256
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ +KD T + KG ++ + EA A++ +NG L N
Sbjct: 290 ETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGN 348
>gi|312092240|ref|XP_003147268.1| RNA-binding protein [Loa loa]
Length = 383
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +++ DL F PFG I R + D TG SKGV ++RF + SEA A+E++NG+
Sbjct: 113 KTMSQLDLEALFKPFGQIITSRILSDNVTGISKGVGFVRFDRKSEAEDAIEKLNGKIPAG 172
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 173 CTEPITVKFA 182
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T++++ FS G I + V+D+ TG+S G ++ + + +A KAV +NG L N
Sbjct: 27 QNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGFVNYIRQEDAYKAVTSLNGLRLQN 86
Query: 91 HSKPIKVLIA 100
K IKV A
Sbjct: 87 --KTIKVSFA 94
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 34 TEDD-LRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
TED L Q F PFG + ++ +KD +TG+ KG ++ + +A A+ +NG L N +
Sbjct: 307 TEDAVLWQLFGPFGAVLSVKIIKDFSTGKCKGYGFVTMGQYEDAVTAITSLNGTQLGNRT 366
>gi|170061963|ref|XP_001866463.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167880034|gb|EDS43417.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 341
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ DL F P+G I R + D TG SKGV +IRF + SEA +A++++NG
Sbjct: 123 KSMTQQDLEALFQPYGQIITSRILCDNITGLSKGVGFIRFDQRSEAERAIQQLNGTTPKG 182
Query: 91 HSKPIKVLIA 100
S+PI V A
Sbjct: 183 ASEPITVKFA 192
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ +KD T + KG ++ + EA AV+ +NG L N
Sbjct: 266 ETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTNYDEAVVAVQSLNGYTLGN 324
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNT-GESKGVAYIRFSKTSEAAKAVEEMNGEFLP 89
+ +T+++++ FS G+++ + ++D+ T G+S G ++ + + +A KA+ NG L
Sbjct: 36 QTMTQEEVKSLFSSIGDVESCKLIRDKVTAGQSLGYGFVNYHRPEDAEKAINTFNGLRLQ 95
Query: 90 NHSKPIKVLIA 100
N K IKV A
Sbjct: 96 N--KTIKVSFA 104
>gi|157114005|ref|XP_001657938.1| RNA-binding protein, putative [Aedes aegypti]
gi|108877490|gb|EAT41715.1| AAEL006675-PA, partial [Aedes aegypti]
Length = 359
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++ + DL FSP+G I R + D TG SKGV +IRF + EA KA++E+NG
Sbjct: 140 KNMLQADLESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRVEAEKAIKELNGTIPKG 199
Query: 91 HSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAY----ARDKFHGFAYPPGIPMVVV 146
++PI V A S T P AAY A +F G + P +
Sbjct: 200 STEPITVKFA------------NNPSNTKTVPPLAAYLGPQAARRFPGPIHHPTGRFSAI 247
Query: 147 PDFSY 151
P++ Y
Sbjct: 248 PNYRY 252
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ +KD T + KG ++ + EA A++ +NG L N
Sbjct: 286 ETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGN 344
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 19/87 (21%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGE-----------------SKGVAYIRFSKT 73
+ +T++++R FS G ++ + ++D+ TGE S G ++ + +
Sbjct: 37 QQMTQEEIRSLFSSIGEVESCKLIRDKVTGESLMYTFLLRFQIFHSGQSLGYGFVNYQRV 96
Query: 74 SEAAKAVEEMNGEFLPNHSKPIKVLIA 100
+A+KA+ +NG L N K IKV A
Sbjct: 97 EDASKAINTLNGLRLQN--KQIKVSFA 121
>gi|380486616|emb|CCF38587.1| RNP domain-containing protein [Colletotrichum higginsianum]
Length = 380
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 57/91 (62%), Gaps = 7/91 (7%)
Query: 9 THDRSREYNDEPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVA 66
T D E+ +P H RLF+ L G +VT++ L + FS + ++Q+ R ++D+ T +SKG
Sbjct: 221 TDDSLAEW--DPSHLRLFVGNLAG-EVTDESLLKAFSRWKSVQKARVIRDKRTAKSKGYG 277
Query: 67 YIRFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
++ FS + +A +EMNG+++ +H P+ V
Sbjct: 278 FVSFSDADDFFQAAKEMNGKYIQSH--PVTV 306
>gi|322709421|gb|EFZ00997.1| oligouridylate binding protein ,putative [Metarhizium anisopliae
ARSEF 23]
Length = 472
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 3 RNYRINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNT 59
R R+N +S N E S I G +V +D L Q FS FG + E R + D T
Sbjct: 148 REIRVNWAYQSNTSNKEDTSSHFHIFVGDLSNEVNDDILLQAFSAFGTVSEARVMWDMKT 207
Query: 60 GESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
G ++G ++ F S+A KA+ M+GE+L
Sbjct: 208 GRTRGYGFVAFRDRSDAEKALSSMDGEWL 236
>gi|157119097|ref|XP_001659335.1| RNA-binding protein, putative [Aedes aegypti]
gi|108875486|gb|EAT39711.1| AAEL008516-PA, partial [Aedes aegypti]
Length = 359
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++ + DL FSP+G I R + D TG SKGV +IRF + EA KA++E+NG
Sbjct: 140 KNMLQADLESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRVEAEKAIKELNGTIPKG 199
Query: 91 HSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAY----ARDKFHGFAYPPGIPMVVV 146
++PI V A S T P AAY A +F G + P +
Sbjct: 200 STEPITVKFA------------NNPSNTKTVPPLAAYLGPQAARRFPGPIHHPTGRFSAI 247
Query: 147 PDFSY 151
P++ Y
Sbjct: 248 PNYRY 252
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ +KD T + KG ++ + EA A++ +NG L N
Sbjct: 286 ETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGN 344
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 19/87 (21%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNT-----------------GESKGVAYIRFSKT 73
+ +T++++R FS G ++ + ++D+ T G+S G ++ + +
Sbjct: 37 QQMTQEEIRSLFSSIGEVESCKLIRDKVTENALIHTFLLRFQISHSGQSLGYGFVNYQRV 96
Query: 74 SEAAKAVEEMNGEFLPNHSKPIKVLIA 100
+A+KA+ +NG L N K IKV A
Sbjct: 97 EDASKAINTLNGLRLQN--KQIKVSFA 121
>gi|18402769|ref|NP_564554.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|334183191|ref|NP_001185184.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|10120431|gb|AAG13056.1|AC011807_15 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|13877633|gb|AAK43894.1|AF370517_1 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|17978685|gb|AAL47336.1| putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|332194351|gb|AEE32472.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|332194352|gb|AEE32473.1| poly(A) binding protein 8 [Arabidopsis thaliana]
Length = 671
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
Query: 14 REYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
+E D+ S L++ + VT+D LR+ F+PFG I + ++D +G S+G ++ FS
Sbjct: 318 KEAADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDP-SGVSRGSGFVAFST 376
Query: 73 TSEAAKAVEEMNGEFLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKF 132
EA +A+ EMNG+ + +KP+ V +A + E ++ Q ++ + A R +
Sbjct: 377 PEEATRAITEMNGKMI--VTKPLYVALAQRKEDRKARLQAQFSQMRPVNMPPAVGPRMQM 434
Query: 133 HGFAYPPGIP 142
YPPG P
Sbjct: 435 ----YPPGGP 440
>gi|71000080|ref|XP_754757.1| glycine-rich RNA-binding protein [Aspergillus fumigatus Af293]
gi|66852394|gb|EAL92719.1| glycine-rich RNA-binding protein, putative [Aspergillus fumigatus
Af293]
gi|159127765|gb|EDP52880.1| glycine-rich RNA-binding protein, putative [Aspergillus fumigatus
A1163]
Length = 118
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 23 SRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
S+LFI T+D LRQGF P+G ++E VKDR+T S+G ++RFS +EA A++
Sbjct: 2 SKLFIGGLAWHTTDDALRQGFEPYGVVEEAIVVKDRDTNRSRGFGFVRFSSDTEADAAMD 61
Query: 82 EMN 84
MN
Sbjct: 62 AMN 64
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 18 DEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ ++ + LR+ F+PFG I R V+D T +SKG A++ F K +EA
Sbjct: 91 DTSQHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEA 150
Query: 77 AKAVEEMNGEFL 88
A++ MNG++L
Sbjct: 151 ENAIQMMNGQWL 162
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 16 YNDEPPHSRLFILCG----KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
YN+ P + + CG ++++ ++ F FG+I ++R KD KG A+I+F
Sbjct: 198 YNNTGP-TNTTVYCGGFPPNTISDNLIKTHFGQFGSIHDVRVFKD------KGYAFIKFI 250
Query: 72 KTSEAAKAVEEMNGEFLPNHSKPIKV 97
AA+A+E + + H P+K
Sbjct: 251 SKEAAARAIEGTHNSEVQGH--PVKC 274
>gi|393909831|gb|EFO16801.2| RNA-binding protein [Loa loa]
Length = 414
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +++ DL F PFG I R + D TG SKGV ++RF + SEA A+E++NG+
Sbjct: 144 KTMSQLDLEALFKPFGQIITSRILSDNVTGISKGVGFVRFDRKSEAEDAIEKLNGKIPAG 203
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 204 CTEPITVKFA 213
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T++++ FS G I + V+D+ TG+S G ++ + + +A KAV +NG L N
Sbjct: 58 QNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGFVNYIRQEDAYKAVTSLNGLRLQN 117
Query: 91 HSKPIKVLIA 100
K IKV A
Sbjct: 118 --KTIKVSFA 125
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 34 TEDD-LRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
TED L Q F PFG + ++ +KD +TG+ KG ++ + +A A+ +NG L N +
Sbjct: 338 TEDAVLWQLFGPFGAVLSVKIIKDFSTGKCKGYGFVTMGQYEDAVTAITSLNGTQLGNRT 397
>gi|171687807|ref|XP_001908844.1| hypothetical protein [Podospora anserina S mat+]
gi|170943865|emb|CAP69517.1| unnamed protein product [Podospora anserina S mat+]
Length = 370
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G + T+D L + FS + ++Q+ + V+D+ T +SKG ++ FS +
Sbjct: 221 DPTHLRLFVGNLAG-ETTDDSLLKAFSRWKSVQKAKVVRDKRTTKSKGFGFVSFSDADDF 279
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAAKLEFK 106
+A +EMNG+++ +H P+ V+ AK E K
Sbjct: 280 FQAAKEMNGKYIQSH--PV-VVRKAKTEIK 306
>gi|261330753|emb|CBH13738.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 666
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 8 NTHDRSREYNDEPPHSRLFILCGK-DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVA 66
N H R + +++ S LFI + VT+ L + FSPFG+I+ + + D +TG S+G+A
Sbjct: 257 NNHQRVPDCSEDAIRSNLFISGLRHSVTDSGLHELFSPFGSIESAKVMLDIHTGRSRGIA 316
Query: 67 YIRFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
+++F + +A +AVE +NG + ++V
Sbjct: 317 FVKFVRLCDAQRAVEALNGSIFCGETITVRV 347
>gi|72393389|ref|XP_847495.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359593|gb|AAX80026.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|70803525|gb|AAZ13429.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 666
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 8 NTHDRSREYNDEPPHSRLFILCGK-DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVA 66
N H R + +++ S LFI + VT+ L + FSPFG+I+ + + D +TG S+G+A
Sbjct: 257 NNHQRVPDCSEDAIRSNLFISGLRHSVTDSGLHELFSPFGSIESAKVMLDIHTGRSRGIA 316
Query: 67 YIRFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
+++F + +A +AVE +NG + ++V
Sbjct: 317 FVKFVRLCDAQRAVEALNGSIFCGETITVRV 347
>gi|294464377|gb|ADE77701.1| unknown [Picea sitchensis]
Length = 299
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 3 RNYRINTHDRSR-----EYNDEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKD 56
R+ R+N D+SR + N++ H R++I DV E+ L + FS GN+ + + V D
Sbjct: 192 RSLRVNLRDKSRSEQRNQTNNDGQH-RVYIGNLSWDVNEEILNEVFSEHGNLLDAKIVFD 250
Query: 57 RNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIAAK 102
R TG S+G +I FS SEA AV +NG+ L + + + ++++
Sbjct: 251 RETGRSRGFGFITFSTQSEAEAAVASLNGKELEGRAMRVDLALSSR 296
>gi|195055815|ref|XP_001994808.1| GH17439 [Drosophila grimshawi]
gi|193892571|gb|EDV91437.1| GH17439 [Drosophila grimshawi]
Length = 520
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 20 PPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
P + I G ++ LR+ F+PFG I + R V+D T +SKG ++ F K SEA
Sbjct: 173 PKQEQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEA 232
Query: 77 AKAVEEMNGEFLPNHS 92
A+ MNG++L + S
Sbjct: 233 ESAITAMNGQWLGSRS 248
>gi|384254118|gb|EIE27592.1| translation initiation factor 3, RNA-binding subunit [Coccomyxa
subellipsoidea C-169]
Length = 285
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
+D EDDLR+ FSPFG I I DR TGES+G A++ F +AA+AV++++G
Sbjct: 211 EDTREDDLRELFSPFGPISRIYIAYDRETGESRGFAFVNFVHREDAARAVQKLDG 265
>gi|367043720|ref|XP_003652240.1| hypothetical protein THITE_2113503 [Thielavia terrestris NRRL 8126]
gi|346999502|gb|AEO65904.1| hypothetical protein THITE_2113503 [Thielavia terrestris NRRL 8126]
Length = 383
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G + T+D L + FS + ++Q+ + ++D+ T +SKG ++ FS +
Sbjct: 235 DPAHLRLFVGNLAG-ETTDDSLLKAFSRWKSVQKAKVIRDKRTNKSKGFGFVSFSDPEDF 293
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAAKLEFK 106
+A +EMNG+++ +H P+ V+ AK E K
Sbjct: 294 FQAAKEMNGKYIQSH--PV-VVHKAKTEIK 320
>gi|198285433|gb|ACH85255.1| embryonic lethal abnormal vision like 1 [Salmo salar]
Length = 273
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ D+ F+ +G I R + D+ +G S+GVA+IRF K +EA A++++NG+ P
Sbjct: 61 KTMTQKDVEDMFTRYGRIINSRVLVDQASGLSRGVAFIRFDKRAEAEDAIKDLNGQKPPG 120
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 121 ASEPITVKFAA 131
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 192 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 251
Query: 84 NG 85
NG
Sbjct: 252 NG 253
>gi|198451107|ref|XP_002137227.1| GA26680 [Drosophila pseudoobscura pseudoobscura]
gi|198131338|gb|EDY67785.1| GA26680 [Drosophila pseudoobscura pseudoobscura]
Length = 503
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 20 PPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
P + I G ++ LR+ F+PFG I + R V+D T +SKG ++ F K SEA
Sbjct: 167 PKQEQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEA 226
Query: 77 AKAVEEMNGEFLPNHS 92
A+ MNG++L + S
Sbjct: 227 ESAITAMNGQWLGSRS 242
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 13/87 (14%)
Query: 16 YNDEPPHSRLFILCGKD-----VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRF 70
YN P + + G + ++E+ L++ F+P+G IQEIR KD KG A++RF
Sbjct: 268 YNQSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKD------KGYAFVRF 321
Query: 71 SKTSEAAKAVEEMNGEFLPNHSKPIKV 97
S A A+ ++ L +++P+K
Sbjct: 322 STKEAATHAIVGVHNTEL--NAQPVKC 346
>gi|195143945|ref|XP_002012957.1| GL23648 [Drosophila persimilis]
gi|194101900|gb|EDW23943.1| GL23648 [Drosophila persimilis]
Length = 503
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 20 PPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
P + I G ++ LR+ F+PFG I + R V+D T +SKG ++ F K SEA
Sbjct: 167 PKQEQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEA 226
Query: 77 AKAVEEMNGEFLPNHS 92
A+ MNG++L + S
Sbjct: 227 ESAITAMNGQWLGSRS 242
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 13/87 (14%)
Query: 16 YNDEPPHSRLFILCGKD-----VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRF 70
YN P + + G + ++E+ L++ F+P+G IQEIR KD KG A++RF
Sbjct: 268 YNQSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKD------KGYAFVRF 321
Query: 71 SKTSEAAKAVEEMNGEFLPNHSKPIKV 97
S A A+ ++ L +++P+K
Sbjct: 322 STKEAATHAIVGVHNTEL--NAQPVKC 346
>gi|38141765|dbj|BAD00701.1| TIA-1 homologue [Bombyx mori]
Length = 388
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+D+ ++N T ++ D H +F+ ++ + LR+ F+PFG I R V+D
Sbjct: 72 LDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDP 131
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
T +SKG A++ F K ++A A++ MNG++L
Sbjct: 132 QTLKSKGYAFVSFVKKADAEAAIQAMNGQWL 162
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 16 YNDEPPHSRLFILCG----KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
YN P + + CG +TE+ ++ FS FG IQ+IR +D KG A+IRF+
Sbjct: 200 YNQSSP-TNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVFRD------KGYAFIRFT 252
Query: 72 KTSEAAKAVEEMNGEFLPNHS 92
AA A+ + + H+
Sbjct: 253 TKEAAAHAIGATHNTEISGHT 273
>gi|195391718|ref|XP_002054507.1| GJ22768 [Drosophila virilis]
gi|194152593|gb|EDW68027.1| GJ22768 [Drosophila virilis]
Length = 504
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 20 PPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
P + I G ++ LR+ F+PFG I + R V+D T +SKG ++ F K SEA
Sbjct: 166 PKQEQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEA 225
Query: 77 AKAVEEMNGEFLPNHS 92
A+ MNG++L + S
Sbjct: 226 ESAITAMNGQWLGSRS 241
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 13/87 (14%)
Query: 16 YNDEPPHSRLFILCGKD-----VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRF 70
YN P + + G + ++E+ L++ F+P+G IQEIR KD KG A++RF
Sbjct: 267 YNQSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKD------KGYAFVRF 320
Query: 71 SKTSEAAKAVEEMNGEFLPNHSKPIKV 97
S A A+ ++ + +++P+K
Sbjct: 321 STKEAATHAIVGVHNTEI--NAQPVKC 345
>gi|259648115|dbj|BAI40365.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+D+ ++N T ++ D H +F+ ++ + LR+ F+PFG I R V+D
Sbjct: 72 LDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDP 131
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
T +SKG A++ F K ++A A++ MNG++L
Sbjct: 132 QTLKSKGYAFVSFVKKADAEAAIQAMNGQWL 162
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 16 YNDEPPHSRLFILCG----KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
YN P + + CG +TE+ ++ FS FG IQ+IR +D KG A+IRF+
Sbjct: 200 YNQSSP-TNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVFRD------KGYAFIRFT 252
Query: 72 KTSEAAKAVEEMNGEFLPNHS 92
AA A+ + + H+
Sbjct: 253 TKEAAAHAIGATHNTEISGHT 273
>gi|403175151|ref|XP_003889057.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171476|gb|EHS64385.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 17 NDEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
ND ++RL++ ++T+DD+RQ F PFG+I+ + +D+ TG+SKG A+++F +
Sbjct: 444 NDPNSYARLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHD 503
Query: 76 AAKAVEEMNG 85
A A+E+MNG
Sbjct: 504 AKNAMEKMNG 513
>gi|268531322|ref|XP_002630787.1| Hypothetical protein CBG02484 [Caenorhabditis briggsae]
Length = 403
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 18 DEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ +V LR+ F PFG++ + + ++D NT +SKG ++ + K EA
Sbjct: 126 DTTRHFHVFVGDLSSEVDNQKLREAFIPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEA 185
Query: 77 AKAVEEMNGEFL 88
+A+E+MNG++L
Sbjct: 186 ERAIEQMNGQWL 197
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 6/55 (10%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGE 86
++TED++RQ F+ +G I E+R K +G A+++F + AAKA+ EMN +
Sbjct: 246 NLTEDEIRQAFASYGRISEVRIFK------MQGYAFVKFENKNAAAKAITEMNNQ 294
>gi|449668124|ref|XP_002167931.2| PREDICTED: CUGBP Elav-like family member 2-like [Hydra
magnipapillata]
Length = 511
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 24 RLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI + K + EDDLR FSP+G I+E+ +++ + G SKG A+I++S +A A++
Sbjct: 110 KLFIGMLSKKLNEDDLRIMFSPYGTIEELTILRNPDGG-SKGCAFIKYSTRLQAQNAIKA 168
Query: 83 M-NGEFLPNHSKPIKVLIA 100
M N + + N S P+ V IA
Sbjct: 169 MHNSQTMENCSSPVVVKIA 187
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 19 EPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
EP +LFI ++ TE +LR P+G I E+ + D+ TG+ KG A++ F + A
Sbjct: 17 EPEACKLFIGQVPRNWTEKELRPILEPYGEIHELSILYDKYTGQHKGCAFLVFYEKEAAN 76
Query: 78 KAVEEMN 84
+ E++
Sbjct: 77 RCQNELH 83
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 10 HDRSREYNDEPPH-SRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY 67
H ++++ E P + LFI ++ T+ DL Q F PFGN+ + D+ T SK +
Sbjct: 411 HQQAKQPQKEGPDGANLFIYHLPQEFTDADLMQTFMPFGNVVSAKVFIDKPTLLSKCFGF 470
Query: 68 IRFSKTSEAAKAVEEMNG 85
+ + + A A+ M+G
Sbjct: 471 VSYDNSLSATNAINAMHG 488
>gi|47228429|emb|CAG05249.1| unnamed protein product [Tetraodon nigroviridis]
Length = 411
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T DD++ F PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 96 EITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 152
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 17 NDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
N P S + CG +TE +RQ FSPFG+I EIR D KG +++RF+
Sbjct: 187 NQSSP-SNCTVYCGGVTTGLTEQIMRQTFSPFGHIMEIRVFPD------KGYSFVRFNSH 239
Query: 74 SEAAKAVEEMNG 85
AA A+ +NG
Sbjct: 240 EAAAHAIVSVNG 251
>gi|194746386|ref|XP_001955661.1| GF18875 [Drosophila ananassae]
gi|190628698|gb|EDV44222.1| GF18875 [Drosophila ananassae]
Length = 495
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 20 PPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
P + I G ++ LR+ F+PFG I + R V+D T +SKG ++ F K SEA
Sbjct: 159 PKQEQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEA 218
Query: 77 AKAVEEMNGEFL 88
A+ MNG++L
Sbjct: 219 ESAITAMNGQWL 230
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 16 YNDEPPHSRLFILCGKD-----VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRF 70
YN P + + G + ++E+ L++ F+P+G IQEIR KD KG A++RF
Sbjct: 260 YNQSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKD------KGYAFVRF 313
Query: 71 SKTSEAAKAV 80
S A A+
Sbjct: 314 STKEAATHAI 323
>gi|209152513|gb|ACI33116.1| ELAV-like protein 1 [Salmo salar]
Length = 374
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ D+ F+ +G I R + D+ +G S+GVA+IRF K +EA A++++NG+ P
Sbjct: 162 KTMTQKDVEDMFTRYGRIINSRVLVDQASGLSRGVAFIRFDKRAEAEDAIKDLNGQKPPG 221
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 222 ASEPITVKFAA 232
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 293 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 352
Query: 84 NG 85
NG
Sbjct: 353 NG 354
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 15/104 (14%)
Query: 8 NTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKD-------- 56
N +D E DEP ++ ++ +++++D+LR FS G ++ + ++D
Sbjct: 44 NGYDEHME--DEPKDAKTNLIVNYLPQNMSQDELRSLFSSIGEVESAKLIRDKVAGNPYH 101
Query: 57 RNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIA 100
+N S G ++ + S+A +A+ +NG L SK IKV A
Sbjct: 102 KNQSHSLGYGFVNYVNASDAERAINTLNGLRL--QSKTIKVSFA 143
>gi|195449393|ref|XP_002072055.1| GK22641 [Drosophila willistoni]
gi|194168140|gb|EDW83041.1| GK22641 [Drosophila willistoni]
Length = 521
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 20 PPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
P + I G ++ LR+ F+PFG I + R V+D T +SKG ++ F K SEA
Sbjct: 176 PKQEQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEA 235
Query: 77 AKAVEEMNGEFL 88
A+ MNG++L
Sbjct: 236 ESAITAMNGQWL 247
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 13/87 (14%)
Query: 16 YNDEPPHSRLFILCGKD-----VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRF 70
YN P + + G + ++E+ L++ F+P+G IQEIR KD KG A++RF
Sbjct: 277 YNQSSPSNCTVYVGGVNSALTALSEEILQKTFTPYGAIQEIRVFKD------KGYAFVRF 330
Query: 71 SKTSEAAKAVEEMNGEFLPNHSKPIKV 97
S A A+ ++ L +++P+K
Sbjct: 331 STKEAATHAIVGVHNTEL--NAQPVKC 355
>gi|315057077|ref|XP_003177913.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
gi|311339759|gb|EFQ98961.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
Length = 152
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 20 PPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
PP +LFI T+D LR+GFS FG I+E VKDR+T S+G ++RFS +EA
Sbjct: 3 PP--KLFIGGLAWHTTDDTLREGFSQFGTIEEAIVVKDRDTNRSRGFGFVRFSSEAEADA 60
Query: 79 AVEEMNGE 86
A+ MN +
Sbjct: 61 ALNAMNNQ 68
>gi|452819344|gb|EME26405.1| translation initiation factor eIF-3 subunit 4 [Galdieria
sulphuraria]
Length = 290
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 38/54 (70%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
+ TE DL++ F PFGNI+ I KDR+TGE KG A++ FS +A K +E+++G
Sbjct: 214 NTTESDLQELFHPFGNIRRIFISKDRHTGEGKGFAFVAFSNREDARKCIEKLDG 267
>gi|308321266|gb|ADO27785.1| nucleolysin tiar [Ictalurus furcatus]
Length = 374
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T DD+R F+PFG I + R VKD TG+SKG ++ F
Sbjct: 86 SSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFY 145
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 146 NKLDAENAIVHMGGQWL 162
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +++ +RQ FSPFG I EIR + KG ++IRFS AA A+ +
Sbjct: 206 VYCGGIQSGLSDHLMRQTFSPFGQIMEIRVFPE------KGYSFIRFSSHESAAHAIVSV 259
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 260 NGTTIEGH 267
>gi|403178034|ref|XP_003336468.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173310|gb|EFP92049.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 17 NDEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
ND ++RL++ ++T+DD+RQ F PFG+I+ + +D+ TG+SKG A+++F +
Sbjct: 444 NDPNSYARLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHD 503
Query: 76 AAKAVEEMNG 85
A A+E+MNG
Sbjct: 504 AKNAMEKMNG 513
>gi|45361397|ref|NP_989276.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
gi|39795756|gb|AAH64164.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 386
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T DD++ F+PFG I + R VKD TG+SKG ++ F +A A+ +M G++L
Sbjct: 116 EITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWL 172
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 4 NYRINTHDRSRE--YNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
Y NT + E N P S + CG +TE +RQ FSPFG I E+R D
Sbjct: 192 TYESNTKQLTYEEVVNQSSP-SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPD-- 248
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RFS AA A+ +NG + H
Sbjct: 249 ----KGYSFVRFSSHESAAHAIVSVNGTTIEGH 277
>gi|367020126|ref|XP_003659348.1| hypothetical protein MYCTH_2296252 [Myceliophthora thermophila ATCC
42464]
gi|347006615|gb|AEO54103.1| hypothetical protein MYCTH_2296252 [Myceliophthora thermophila ATCC
42464]
Length = 376
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G + T+D L + FS + ++Q+ + ++D+ T +SKG ++ FS +
Sbjct: 227 DPTHLRLFVGNLAG-ETTDDSLLKAFSRWKSVQKAKVIRDKRTNKSKGFGFVSFSDPEDF 285
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAAKLEFK 106
+A +EMNG+++ +H P+ V+ AK E K
Sbjct: 286 FQAAKEMNGKYIQSH--PV-VVRKAKTEIK 312
>gi|167527097|ref|XP_001747881.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773630|gb|EDQ87268.1| predicted protein [Monosiga brevicollis MX1]
Length = 553
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+DVTED+LR+ F +G I +R VKDR+ G+S+ ++ FS EA +A++EMNG +
Sbjct: 323 EDVTEDELRKMFEAYGTIVSVRVVKDRD-GQSRQFGFVLFSSEEEATRAIQEMNGRMTAD 381
Query: 91 HSKPIKV 97
KP+ V
Sbjct: 382 -GKPLYV 387
>gi|41054740|ref|NP_957426.1| nucleolysin TIAR [Danio rerio]
gi|33416339|gb|AAH55501.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Danio
rerio]
Length = 370
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T DD+R F+PFG I + R VKD TG+SKG ++ F
Sbjct: 86 SSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFY 145
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 146 NKLDAENAIVHMGGQWL 162
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +TE +RQ FSPFG I EIR + KG ++IRFS AA A+ +
Sbjct: 206 VYCGGIQSGLTEHLMRQTFSPFGQIMEIRVFPE------KGYSFIRFSSHESAAHAIVSV 259
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 260 NGTTIEGH 267
>gi|89272716|emb|CAJ83609.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 389
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T DD++ F+PFG I + R VKD TG+SKG ++ F +A A+ +M G++L
Sbjct: 116 EITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWL 172
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 4 NYRINTHDRSRE--YNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
Y NT + E N P S + CG +TE +RQ FSPFG I E+R D
Sbjct: 192 TYESNTKQLTYEEVVNQSSP-SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPD-- 248
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RFS AA A+ +NG + H
Sbjct: 249 ----KGYSFVRFSSHESAAHAIVSVNGTTIEGH 277
>gi|195573327|ref|XP_002104645.1| GD18328 [Drosophila simulans]
gi|194200572|gb|EDX14148.1| GD18328 [Drosophila simulans]
Length = 824
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++ + LR+ F+PFG I R V+D +T +SKG A++ F K +EA A++ MNG+++ +
Sbjct: 105 EIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSR 164
Query: 92 S 92
S
Sbjct: 165 S 165
>gi|195353012|ref|XP_002043004.1| GM16370 [Drosophila sechellia]
gi|194127069|gb|EDW49112.1| GM16370 [Drosophila sechellia]
Length = 504
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 20 PPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
P + I G ++ LR+ F+PFG I + R V+D T +SKG ++ F K SEA
Sbjct: 160 PKQEQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEA 219
Query: 77 AKAVEEMNGEFL 88
A+ MNG++L
Sbjct: 220 ESAITAMNGQWL 231
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 16 YNDEPPHSRLFILCGKD-----VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRF 70
YN P + + G + ++E+ L++ F+P+G IQEIR KD KG A++RF
Sbjct: 261 YNQSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKD------KGYAFVRF 314
Query: 71 SKTSEAAKAV 80
S A A+
Sbjct: 315 STKEAATHAI 324
>gi|24650782|ref|NP_651609.1| CG34362, isoform A [Drosophila melanogaster]
gi|21464374|gb|AAM51990.1| RE10833p [Drosophila melanogaster]
gi|23172487|gb|AAF56774.2| CG34362, isoform A [Drosophila melanogaster]
gi|220947934|gb|ACL86510.1| CG34362-PA [synthetic construct]
gi|220957166|gb|ACL91126.1| CG34362-PA [synthetic construct]
Length = 505
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 20 PPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
P + I G ++ LR+ F+PFG I + R V+D T +SKG ++ F K SEA
Sbjct: 161 PKQEQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEA 220
Query: 77 AKAVEEMNGEFL 88
A+ MNG++L
Sbjct: 221 ESAITAMNGQWL 232
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 16 YNDEPPHSRLFILCGKD-----VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRF 70
YN P + + G + ++E+ L++ F+P+G IQEIR KD KG A++RF
Sbjct: 262 YNQSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKD------KGYAFVRF 315
Query: 71 SKTSEAAKAV 80
S A A+
Sbjct: 316 STKEAATHAI 325
>gi|241831489|ref|XP_002414860.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
gi|215509072|gb|EEC18525.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
Length = 686
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 25 LFILCGKDVTEDD-LRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
L++ D +D+ LR+ F PFGNI + + D N G SKG ++ FS EA KAV EM
Sbjct: 297 LYVKNLDDALDDERLRKEFGPFGNITSAKVMTDAN-GRSKGFGFVCFSSPEEATKAVTEM 355
Query: 84 NGEFLPNHSKPIKVLIAAKLEFKEGYRGGQ 113
NG + SKP+ V +A + E ++ + Q
Sbjct: 356 NGRIV--VSKPLYVALAQRKEDRKAHLASQ 383
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
+VTE L + FS G + IR +D T S G AY+ F + ++A +A++ MN + + N
Sbjct: 21 EVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDAIKN- 79
Query: 92 SKPIKVLIAAK 102
KPI+++ + +
Sbjct: 80 -KPIRIMWSQR 89
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGE 86
G ++ +D L F +G I + + D ++G+++G ++ F + A +AVEE+NG+
Sbjct: 200 GDELDDDKLLVIFEKYGKITSAKVMTD-DSGKNRGFGFVSFEEPDSAERAVEELNGK 255
>gi|242080503|ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
gi|241941370|gb|EES14515.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
Length = 140
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 21 PHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
P LF+ K T + LR F+ FG + R V DR +G SKG ++R++ T EA K
Sbjct: 33 PSPNLFVSGLSKRTTTEGLRDAFAKFGEVVHARVVTDRVSGFSKGFGFVRYATTEEATKG 92
Query: 80 VEEMNGEFL 88
+E M+G+FL
Sbjct: 93 IEGMDGKFL 101
>gi|147902038|ref|NP_001087561.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
laevis]
gi|51261513|gb|AAH80105.1| MGC84540 protein [Xenopus laevis]
Length = 389
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T DD++ F+PFG I + R VKD TG+SKG ++ F +A A+ +M G++L
Sbjct: 116 EITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWL 172
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 23 SRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
S + CG +TE +RQ FSPFG I E+R D KG +++RFS AA A
Sbjct: 212 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPD------KGYSFVRFSSHESAAHA 265
Query: 80 VEEMNGEFLPNH 91
+ +NG + H
Sbjct: 266 IVSVNGTTIEGH 277
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 9 THDRSREYNDEPPHSRLFILCGKDVTED-DLRQGFSPFGNIQEIRCVKDRNTGESKGVAY 67
T+ SR ++ S+LFI TE+ LR FSPFG I E+R ++DR TG S+G +
Sbjct: 28 TYTLSRGFS-----SKLFIGGLAWGTEERGLRDAFSPFGEIIEVRVIQDRETGRSRGFGF 82
Query: 68 IRFSKTSEAAKAVEEMNGEFLPNHS 92
+ + EA KA+E M+G L +
Sbjct: 83 VSYITDQEAQKAMEAMDGRVLDGRT 107
>gi|118918389|ref|NP_001036895.2| TIA1 cytotoxic granule-associated RNA binding protein [Bombyx mori]
gi|111608113|gb|ABH10800.1| nucleolysin TIAR protein [Bombyx mori]
Length = 402
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+D+ ++N T ++ D H +F+ ++ + LR+ F+PFG I R V+D
Sbjct: 72 LDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDP 131
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
T +SKG A++ F K ++A A++ MNG++L
Sbjct: 132 QTLKSKGYAFVSFVKKADAEAAIQAMNGQWL 162
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 16 YNDEPPHSRLFILCG----KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
YN P + + CG +TE+ ++ FS FG IQ+IR +D KG A+IRF+
Sbjct: 200 YNQSSP-TNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVFRD------KGYAFIRFT 252
Query: 72 KTSEAAKAVEEMNGEFLPNHS 92
AA A+E + + H+
Sbjct: 253 TKEAAAHAIEATHNTEISGHT 273
>gi|259648117|dbj|BAI40366.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+D+ ++N T ++ D H +F+ ++ + LR+ F+PFG I R V+D
Sbjct: 72 LDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDP 131
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
T +SKG A++ F K ++A A++ MNG++L
Sbjct: 132 QTLKSKGYAFVSFVKKADAEAAIQAMNGQWL 162
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 16 YNDEPPHSRLFILCG----KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
YN P + + CG +TE+ ++ FS FG IQ+IR +D KG A+IRF+
Sbjct: 200 YNQSSP-TNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVFRD------KGYAFIRFT 252
Query: 72 KTSEAAKAVEEMNGEFLPNHS 92
AA A+E + + H+
Sbjct: 253 TKEAAAHAIEATHNTEISGHT 273
>gi|224068117|ref|XP_002302667.1| predicted protein [Populus trichocarpa]
gi|222844393|gb|EEE81940.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 20 PPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PPH + G KDV ED+LR G I EIR +KD++TGESKG A++ F A
Sbjct: 71 PPHGSEVFIGGLPKDVIEDELRDLCETIGEIFEIRLMKDKDTGESKGFAFVAFKSKEVAR 130
Query: 78 KAVEEM 83
KA EE+
Sbjct: 131 KATEEL 136
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 12 RSREYNDE--PPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYI 68
R++ + DE P + LFI +TEDD+ F+ FG + +R K+ ++G KG Y+
Sbjct: 482 RAKHFKDERSAPSNTLFIGGLAWALTEDDIWNAFAEFGEVTGVRLPKEIDSGRPKGFGYV 541
Query: 69 RFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIAAK 102
F AAKA+E MNG+ L +PI++ A K
Sbjct: 542 EFVSQDNAAKALETMNGQAL--GGRPIRIDFAGK 573
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 15 EYNDEPPHSRLF--ILCGK---DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIR 69
+ N+ P H + G+ +V D L+ F +G + + R DR++G S+G Y+
Sbjct: 382 DSNENPTHDNGIKTLWVGQLSWNVDNDWLKSEFEQYGTVLDARVQCDRDSGRSRGFGYVD 441
Query: 70 FSKTSEAAKAVEEMNGEFL 88
F+ ++EA +A +E +G+ L
Sbjct: 442 FATSAEALRASKEAHGKEL 460
>gi|37595358|gb|AAQ94565.1| RNA binding motif protein [Danio rerio]
Length = 277
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 24 RLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI + +E L FS FG I E+ +KDR T +S+G A++ + S+A A E
Sbjct: 9 KLFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPSDAKDAARE 68
Query: 83 MNGEFLPNHSKPIKVLIAAKLEFK 106
MNG+ L KPIKV A K +F+
Sbjct: 69 MNGKPL--DGKPIKVEQATKPQFE 90
>gi|442621497|ref|NP_001263033.1| CG34362, isoform F [Drosophila melanogaster]
gi|440217979|gb|AGB96413.1| CG34362, isoform F [Drosophila melanogaster]
Length = 498
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 20 PPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
P + I G ++ LR+ F+PFG I + R V+D T +SKG ++ F K SEA
Sbjct: 161 PKQEQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEA 220
Query: 77 AKAVEEMNGEFL 88
A+ MNG++L
Sbjct: 221 ESAITAMNGQWL 232
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 16 YNDEPPHSRLFILCGKD-----VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRF 70
YN P + + G + ++E+ L++ F+P+G IQEIR KD KG A++RF
Sbjct: 262 YNQSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKD------KGYAFVRF 315
Query: 71 SKTSEAAKAV 80
S A A+
Sbjct: 316 STKEAATHAI 325
>gi|195574475|ref|XP_002105214.1| GD21364 [Drosophila simulans]
gi|194201141|gb|EDX14717.1| GD21364 [Drosophila simulans]
Length = 496
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 20 PPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
P + I G ++ LR+ F+PFG I + R V+D T +SKG ++ F K SEA
Sbjct: 159 PKQEQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEA 218
Query: 77 AKAVEEMNGEFL 88
A+ MNG++L
Sbjct: 219 ESAITAMNGQWL 230
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 16 YNDEPPHSRLFILCGKD-----VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRF 70
YN P + + G + ++E+ L++ F+P+G IQEIR KD KG A++RF
Sbjct: 260 YNQSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKD------KGYAFVRF 313
Query: 71 SKTSEAAKAV 80
S A A+
Sbjct: 314 STKEAATHAI 323
>gi|194907035|ref|XP_001981474.1| GG11588 [Drosophila erecta]
gi|190656112|gb|EDV53344.1| GG11588 [Drosophila erecta]
Length = 502
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 20 PPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
P + I G ++ LR+ F+PFG I + R V+D T +SKG ++ F K SEA
Sbjct: 165 PKQEQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEA 224
Query: 77 AKAVEEMNGEFL 88
A+ MNG++L
Sbjct: 225 ESAITAMNGQWL 236
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 16 YNDEPPHSRLFILCGKD-----VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRF 70
YN P + + G + ++E+ L++ F+P+G IQEIR KD KG A++RF
Sbjct: 266 YNQSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKD------KGYAFVRF 319
Query: 71 SKTSEAAKAV 80
S A A+
Sbjct: 320 STKEAATHAI 329
>gi|242823058|ref|XP_002488014.1| glycine-rich RNA-binding protein, putative [Talaromyces
stipitatus ATCC 10500]
gi|218712935|gb|EED12360.1| glycine-rich RNA-binding protein, putative [Talaromyces
stipitatus ATCC 10500]
Length = 134
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 23 SRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
S+LFI T+D LRQGF FG I+E +KDR+T S+G ++RF+ +EA A++
Sbjct: 2 SKLFIGGLAWHTTDDTLRQGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFATDAEADAAID 61
Query: 82 EMNGE 86
MN +
Sbjct: 62 GMNNQ 66
>gi|195566472|ref|XP_002106804.1| GD17091 [Drosophila simulans]
gi|194204196|gb|EDX17772.1| GD17091 [Drosophila simulans]
Length = 371
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++++ DL F+ FG I R + D +G SKGV +IRF + +EA +A++E+NG+
Sbjct: 139 KNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAIQELNGKTPKG 198
Query: 91 HSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYAR 129
+++PI V A + ++ Y +PQ+AA R
Sbjct: 199 YAEPITVKFANNPSNSAKAQIAPPLTA-YLTPQAAAATR 236
>gi|380748929|ref|NP_001244132.1| nucleolysin TIAR isoform 2 [Gallus gallus]
gi|28883273|gb|AAO49720.1| TIA-1 [Gallus gallus]
Length = 372
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N S + D H +F+ ++T +D++ F+PFG I + R VKD
Sbjct: 72 MGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMA 131
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A+++M G++L
Sbjct: 132 TGKSKGYGFVSFFNKWDAENAIQQMGGQWL 161
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 5 YRINTHDRSRE--YNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNT 59
Y NT S + N P S + CG +TE +RQ FSPFG I EIR D
Sbjct: 182 YESNTKQLSYDDVVNQSSP-SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD--- 237
Query: 60 GESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 238 ---KGYSFVRFNSHESAAHAIVSVNGTTIEGH 266
>gi|47217530|emb|CAG02457.1| unnamed protein product [Tetraodon nigroviridis]
Length = 418
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N + + D H +F+ ++T DD++ F PFG I + R VKD
Sbjct: 77 MGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTDDVKAAFGPFGRISDARVVKDMA 136
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A+++M G++L
Sbjct: 137 TGKSKGYGFVSFFNKWDAENAIQQMGGQWL 166
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 23 SRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
S + CG +TE +RQ FSPFG I EIR D KG +++RF+ AA A
Sbjct: 206 SNCTVYCGGVSTGLTEQLMRQTFSPFGPIMEIRVFPD------KGYSFVRFNSHESAAHA 259
Query: 80 VEEMNGEFLPNH 91
+ +NG + H
Sbjct: 260 IVSVNGSSIEGH 271
>gi|452820609|gb|EME27649.1| poly(A) binding / translation initiation factor [Galdieria
sulphuraria]
Length = 784
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
D+ E+ LR+ FS FG + R ++D + G S+G ++ FS EA KAV EMNG+ +
Sbjct: 373 DMDEEGLRKEFSNFGTLTSCRVMRD-DKGVSRGFGFVCFSTPEEATKAVTEMNGKMM--G 429
Query: 92 SKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYAR--DKFHGFAYP-PGIPM 143
KP+ V +A + E ++ Q+I+ +A R G YP PG PM
Sbjct: 430 KKPLYVCLAQRKEIRQAQLEAQRIAA------AAGGLRIPGAVPGSLYPQPGAPM 478
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
TE+ +R+ FS +G I + D N KG A++ F+K AAKAVEE+NG
Sbjct: 271 CTEEKIRELFSLYGEITSVYVPVDENE-VPKGFAFVNFAKPECAAKAVEELNG 322
>gi|442621495|ref|NP_001263032.1| CG34362, isoform E [Drosophila melanogaster]
gi|440217978|gb|AGB96412.1| CG34362, isoform E [Drosophila melanogaster]
Length = 509
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 20 PPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
P + I G ++ LR+ F+PFG I + R V+D T +SKG ++ F K SEA
Sbjct: 161 PKQEQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEA 220
Query: 77 AKAVEEMNGEFL 88
A+ MNG++L
Sbjct: 221 ESAITAMNGQWL 232
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 16 YNDEPPHSRLFILCGKD-----VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRF 70
YN P + + G + ++E+ L++ F+P+G IQEIR KD KG A++RF
Sbjct: 262 YNQSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKD------KGYAFVRF 315
Query: 71 SKTSEAAKAV 80
S A A+
Sbjct: 316 STKEAATHAI 325
>gi|410928269|ref|XP_003977523.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Takifugu rubripes]
Length = 334
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ ++ DL FS +G I R + D+ +G S+GVA+IRF K SEA A++ +NG P
Sbjct: 126 RTASQQDLEDMFSHYGRIINSRVLVDQASGVSRGVAFIRFDKRSEAEDAIKHLNGHTPPG 185
Query: 91 HSKPIKVLIAAKLEFKEGYRGGQKISVQY 119
++PI V A RG Q +S Y
Sbjct: 186 SAEPITVKFATN---PNQARGSQVMSQMY 211
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G++ E L Q F PFG + ++ ++D NT + KG ++ S EAA A+ +
Sbjct: 254 IFIYNLGQEADEAILWQLFGPFGAVVNVKVIRDFNTSKCKGFGFVTMSNYEEAAMAIHSL 313
Query: 84 NG 85
NG
Sbjct: 314 NG 315
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 18 DEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
DE + L + + +++++LR FS G+++ + ++D+ G S G ++ F S+A
Sbjct: 26 DEDARTNLIVNYLPQSMSQEELRSLFSSVGDVESAKLIRDKVAGHSLGYGFVNFVNPSDA 85
Query: 77 AKAVEEMNGEFLPNHSKPIKV 97
+A+ +NG L SK +KV
Sbjct: 86 VRAINTLNG--LRLQSKTLKV 104
>gi|449488383|ref|XP_002188190.2| PREDICTED: nucleolysin TIA-1-like, partial [Taeniopygia guttata]
Length = 537
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N S + D H +F+ ++T +D++ F+PFG I + R VKD
Sbjct: 72 MGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMA 131
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A+++M G++L
Sbjct: 132 TGKSKGYGFVSFFNKWDAENAIQQMGGQWL 161
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 35 EDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
E +RQ FSPFG I EIR D KG +++RFS AA A+ +NG + H
Sbjct: 206 EQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNGTTIEGH 256
>gi|256078401|ref|XP_002575484.1| bruno-like rna binding protein [Schistosoma mansoni]
gi|350645920|emb|CCD59385.1| bruno-like rna binding protein [Schistosoma mansoni]
Length = 479
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 1 MDRNYRINTHDRSREYNDEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNT 59
M R ++ T D R + +LF+ + K E+D+R F PFG I+E ++D+N
Sbjct: 1 MARPLQVKTADMERRTEER----KLFVGMLSKQQNEEDVRLLFEPFGTIEECTILRDQN- 55
Query: 60 GESKGVAYIRFSKTSEAAKAVEEMNG-EFLPNHSKPIKVLIA 100
G SKG A+++FS EA A+ ++G + +P S I V A
Sbjct: 56 GNSKGCAFVKFSTQQEAQSAILTLHGSQTMPGASSSIVVKFA 97
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 16 YNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTS 74
Y P LFI ++ + +L Q F PFG + + DR T +SK ++ F +
Sbjct: 386 YGLWPEGCNLFIYHLPQEFGDPELAQMFMPFGTVISAKVYVDRATNQSKCFGFVSFDNPT 445
Query: 75 EAAKAVEEMNG 85
A A+ MNG
Sbjct: 446 SAQTAIHAMNG 456
>gi|47210814|emb|CAF92867.1| unnamed protein product [Tetraodon nigroviridis]
Length = 447
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ ++ DL FS +G I R + D+ +G S+GVA+IRF K SEA A++ +NG P
Sbjct: 233 RTASQQDLEDMFSHYGRIINSRVLVDQASGVSRGVAFIRFDKRSEAEDAIKHLNGHTPPG 292
Query: 91 HSKPIKVLIAA 101
S+PI V A
Sbjct: 293 SSEPITVKFAT 303
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G++ E L Q F PFG + ++ ++D NT + KG ++ S EAA A+ +
Sbjct: 367 IFIYNLGQEADEAILWQLFGPFGAVVNVKVIRDFNTSKCKGFGFVTMSNYEEAAMAIHSL 426
Query: 84 NG 85
NG
Sbjct: 427 NG 428
>gi|209155462|gb|ACI33963.1| ELAV-like protein 1 [Salmo salar]
Length = 342
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ D+ F+ +G I R + D+ +G S+GVA+IRF K +EA A++++NG+ P
Sbjct: 131 KTMTQKDVEDMFARYGRIINSRVLVDQASGLSRGVAFIRFDKRAEAEDAIKDLNGQKPPG 190
Query: 91 HSKPIKVLIAA 101
++PI V AA
Sbjct: 191 SAEPITVKFAA 201
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 262 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIGSL 321
Query: 84 NG 85
NG
Sbjct: 322 NG 323
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +++D+LR FS G ++ + ++D+ G S G ++ + S+A +A+ +NG L
Sbjct: 45 QSMSQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLTPSDAERAINTLNG--LRL 102
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 103 QSKTIKV 109
>gi|296421441|ref|XP_002840273.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636488|emb|CAZ84464.1| unnamed protein product [Tuber melanosporum]
Length = 91
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 23 SRLFILCGKDVTEDD-LRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
++LFI T+DD LRQ F FGN++E VKDR+TG S+G ++R+S EA A++
Sbjct: 2 AKLFIGGLAWHTDDDALRQKFQEFGNVEEAVVVKDRDTGRSRGFGFVRYSSDEEATAAMD 61
Query: 82 EMN 84
MN
Sbjct: 62 NMN 64
>gi|7322081|gb|AAB25519.2| RRM9 [Drosophila melanogaster]
Length = 444
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGE-----SKGVAYIRFSKTSEAAKAVEEMNG 85
K++T+ DL FSP+G I R + D TGE SKGV +IRF + EA +A++E+NG
Sbjct: 205 KNMTQSDLESLFSPYGKIITSRILCDNITGEHAAGLSKGVGFIRFDQRFEADRAIKELNG 264
Query: 86 EFLPNHSKPIKVLIA 100
N ++PI V A
Sbjct: 265 TTPKNSTEPITVKFA 279
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 19 EP-PHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
EP P + L + + +++D++R F FG ++ + ++D+ TG+S G ++ + K +A
Sbjct: 105 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDA 164
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
KA+ +NG L N K IKV IA
Sbjct: 165 EKAINALNGLRLQN--KTIKVSIA 186
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
D E+ L Q F PFG +Q ++ ++D + + KG ++ + EA A++ +NG L N
Sbjct: 371 DTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSLNGYTLGN 429
>gi|408391396|gb|EKJ70774.1| hypothetical protein FPSE_09067 [Fusarium pseudograminearum CS3096]
Length = 351
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 53/84 (63%), Gaps = 5/84 (5%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G + T+D L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 209 DPAHLRLFVGNLAG-ETTDDALLKAFSRWQSVQKARVIRDKRTSKSKGYGFVSFSDADDF 267
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A +EMNG+++ +H P+ V A
Sbjct: 268 FQAAKEMNGKYIQSH--PVTVRKA 289
>gi|449267712|gb|EMC78625.1| Nucleolysin TIA-1 isoform p40, partial [Columba livia]
Length = 361
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N S + D H +F+ ++T +D++ F+PFG I + R VKD
Sbjct: 63 MGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMA 122
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A+++M G++L
Sbjct: 123 TGKSKGYGFVSFFNKWDAENAIQQMGGQWL 152
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y NT S E ++ S + CG +TE +RQ FSPFG I EIR D
Sbjct: 173 YEANTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD---- 228
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 229 --KGYSFVRFNSHESAAHAIVSVNGTTIEGH 257
>gi|322693766|gb|EFY85615.1| TIA1 cytotoxic granule-associated RNA binding protein [Metarhizium
acridum CQMa 102]
Length = 444
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 2 DRN-YRINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDR 57
D+N R+N +S N E S I G +V +D L Q FS FG + E R + D
Sbjct: 118 DKNEIRVNWAYQSNTSNKEDTSSHFHIFVGDLSNEVNDDILLQAFSAFGTVSEARVMWDM 177
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG ++G ++ F S+A KA+ M+GE+L
Sbjct: 178 KTGRTRGYGFVAFRDRSDAEKALSSMDGEWL 208
>gi|410922589|ref|XP_003974765.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 386
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T DD++ F PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 105 EITTDDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 161
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 23 SRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
S + CG +TE +RQ FSPFG I EIR D KG +++RF+ AA A
Sbjct: 201 SNCTVYCGGVSTGLTEQLMRQTFSPFGPIMEIRVFPD------KGYSFVRFNSHESAAHA 254
Query: 80 VEEMNGEFLPNH 91
+ +NG + H
Sbjct: 255 IVSVNGSSIEGH 266
>gi|342837655|tpg|DAA34917.1| TPA_inf: embryonic lethal abnormal vision 1-like protein [Schmidtea
mediterranea]
Length = 466
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 28 LCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
+CG K +T+ +L + FS G I R + D TG S+GVA+IRF + EA A++++NG
Sbjct: 193 ICGLPKKMTQVELEEQFSQCGKIITARILYDNKTGLSRGVAFIRFDQRCEAEMAIKKLNG 252
Query: 86 EFLPNHSKPIKVLIA 100
N S+PI V A
Sbjct: 253 HMPDNSSEPITVKFA 267
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++T++++R F+ G ++ + V+D+ TGES G A+++F + ++A KA++ +NG L N
Sbjct: 113 NMTQEEVRALFTSIGEVESCKLVRDKTTGESLGYAFVKFVRPNDAEKAIKTLNGLRLQN- 171
Query: 92 SKPIKVLIA 100
K IKV +A
Sbjct: 172 -KTIKVSLA 179
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E L Q F PFG +Q ++ V+D T + KG ++ S EA +++ +NG L N
Sbjct: 365 ETEEATLWQLFGPFGAVQTVKIVRDSTTNKCKGFGFVTMSNYEEALLSIQSLNGFALGN 423
>gi|31873732|emb|CAD97833.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 103 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 161
Query: 92 SKPIKV 97
+P+KV
Sbjct: 162 -RPMKV 166
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 11 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 54
>gi|432853220|ref|XP_004067599.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Oryzias latipes]
Length = 335
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ + + DL F+ FG I R + D+ +G S+GVA+IRF K SEA AV+ +NG P
Sbjct: 126 RTLGQQDLEDMFASFGRIINSRVLVDQASGLSRGVAFIRFDKRSEAEDAVKHLNGHTPPG 185
Query: 91 HSKPIKVLIAA 101
S+PI V A
Sbjct: 186 GSEPITVKFAV 196
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 262 QDADEGMLWQMFGPFGAVVNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIHSLNG 316
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+D+LR FS G ++ + ++D+ G S G ++ F ++A +A+ +NG L
Sbjct: 40 QSMTQDELRSLFSSVGEVESAKLIRDKVAGHSLGYGFVNFVNPNDAERAISTLNG--LRL 97
Query: 91 HSKPIKVLIA 100
SK IKV A
Sbjct: 98 QSKTIKVSFA 107
>gi|67526991|ref|XP_661557.1| hypothetical protein AN3953.2 [Aspergillus nidulans FGSC A4]
gi|40740072|gb|EAA59262.1| hypothetical protein AN3953.2 [Aspergillus nidulans FGSC A4]
gi|259481471|tpe|CBF75020.1| TPA: RNP domain protein (AFU_orthologue; AFUA_6G08040) [Aspergillus
nidulans FGSC A4]
Length = 353
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G +VT+D L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 223 DPAHFRLFVGNLAG-EVTDDSLFKAFSKYTSVQKARVIRDKRTQKSKGYGFVSFSDGDDY 281
Query: 77 AKAVEEMNGEFLPNH 91
KA EM G+++ +H
Sbjct: 282 FKAAREMQGKYIGSH 296
>gi|426241414|ref|XP_004014586.1| PREDICTED: RNA-binding protein 39 isoform 7 [Ovis aries]
Length = 367
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 103 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELTG- 161
Query: 92 SKPIKV 97
+P+KV
Sbjct: 162 -RPMKV 166
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 11 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 54
>gi|410055060|ref|XP_003953766.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391517|ref|XP_004062119.1| PREDICTED: RNA-binding protein 39 isoform 6 [Gorilla gorilla
gorilla]
gi|20988961|gb|AAH30493.1| Rbm39 protein [Mus musculus]
gi|34364789|emb|CAE45833.1| hypothetical protein [Homo sapiens]
gi|111598490|gb|AAH82607.1| Rbm39 protein [Mus musculus]
gi|119596570|gb|EAW76164.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_d [Homo
sapiens]
gi|149030835|gb|EDL85862.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_g [Rattus
norvegicus]
Length = 367
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 103 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 161
Query: 92 SKPIKV 97
+P+KV
Sbjct: 162 -RPMKV 166
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 11 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 54
>gi|397482906|ref|XP_003812655.1| PREDICTED: polyadenylate-binding protein 3-like [Pan paniscus]
Length = 634
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
D+ ++ LR+ FSPFG I + + + G SKG ++ FS EA KAV EMNG +
Sbjct: 304 DIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIV--A 359
Query: 92 SKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPGIPMVVVP 147
+KP+ V +A + E ++ Y ++ +Y Q A R + A P G M VP
Sbjct: 360 TKPLYVALAQRKEERQAY-----LTNEYM--QRMASVRAVPNQRAPPSGYFMTAVP 408
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
G+D+ ++ L+ F FG ++ + D +G+SKG ++ F + +A KAV+EMNG+ L
Sbjct: 199 GEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKEL 256
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DVTE L + FSP G I IR +D T S AY+ F +A A++ MN + +
Sbjct: 21 DVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALDTMNFDVI--K 78
Query: 92 SKPIKVLIAAK 102
KP++++ + +
Sbjct: 79 GKPLRIMWSQR 89
>gi|317106694|dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+T+D L++ FS FG I + ++D N G S+G ++ FS EA++A+ EMNG+ + S
Sbjct: 322 ITDDKLKELFSEFGTITSCKVMRDPN-GVSRGSGFVAFSTAEEASRALTEMNGKMV--VS 378
Query: 93 KPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPGIPMV 144
KP+ V +A + E + ++ QY+ + A YPPG P +
Sbjct: 379 KPLYVALAQRKEERRA-----RLQAQYSQIRPAMAPPIGPRMPIYPPGTPGI 425
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGE 86
TE+DL++ F +G I ++D N G+S+ ++ F +AA++VE +NG+
Sbjct: 219 TTEEDLKKIFGEYGTITSAVVMRDGN-GKSRCFGFVNFENPDDAAQSVEALNGK 271
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 21 PHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
P ++LFI E LR+ FS +G + + R + DR TG S+G +I ++ EA+ A
Sbjct: 40 PSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSA 99
Query: 80 VEEMNGEFLPNHSKPIKV 97
++ ++G+ L H +PI+V
Sbjct: 100 IQALDGQDL--HGRPIRV 115
>gi|410055058|ref|XP_003316934.2| PREDICTED: uncharacterized protein LOC458443 isoform 4 [Pan
troglodytes]
gi|410055062|ref|XP_003953767.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391515|ref|XP_004062118.1| PREDICTED: RNA-binding protein 39 isoform 5 [Gorilla gorilla
gorilla]
gi|426391519|ref|XP_004062120.1| PREDICTED: RNA-binding protein 39 isoform 7 [Gorilla gorilla
gorilla]
gi|119596566|gb|EAW76160.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
gi|119596571|gb|EAW76165.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
Length = 373
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 103 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 161
Query: 92 SKPIKV 97
+P+KV
Sbjct: 162 -RPMKV 166
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 11 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 54
>gi|410928273|ref|XP_003977525.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Takifugu rubripes]
Length = 368
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ ++ DL FS +G I R + D+ +G S+GVA+IRF K SEA A++ +NG P
Sbjct: 160 RTASQQDLEDMFSHYGRIINSRVLVDQASGVSRGVAFIRFDKRSEAEDAIKHLNGHTPPG 219
Query: 91 HSKPIKVLIAAKLEFKEGYRGGQKISVQY 119
++PI V A RG Q +S Y
Sbjct: 220 SAEPITVKFATN---PNQARGSQVMSQMY 245
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G++ E L Q F PFG + ++ ++D NT + KG ++ S EAA A+ +
Sbjct: 288 IFIYNLGQEADEAILWQLFGPFGAVVNVKVIRDFNTSKCKGFGFVTMSNYEEAAMAIHSL 347
Query: 84 NG 85
NG
Sbjct: 348 NG 349
>gi|157114083|ref|XP_001657973.1| nucleolysin tia-1 [Aedes aegypti]
gi|108877443|gb|EAT41668.1| AAEL006710-PA [Aedes aegypti]
Length = 453
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 18 DEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ ++ + LR+ F+PFG I R V+D T +S+G A++ F K +EA
Sbjct: 91 DTSQHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSRGYAFVSFVKKAEA 150
Query: 77 AKAVEEMNGEFLPNHS 92
A++ MNG++L + S
Sbjct: 151 ENAIQMMNGQWLGSRS 166
>gi|432853218|ref|XP_004067598.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Oryzias latipes]
Length = 356
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ + + DL F+ FG I R + D+ +G S+GVA+IRF K SEA AV+ +NG P
Sbjct: 147 RTLGQQDLEDMFASFGRIINSRVLVDQASGLSRGVAFIRFDKRSEAEDAVKHLNGHTPPG 206
Query: 91 HSKPIKVLIAA 101
S+PI V A
Sbjct: 207 GSEPITVKFAV 217
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 283 QDADEGMLWQMFGPFGAVVNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIHSLNG 337
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+D+LR FS G ++ + ++D+ G S G ++ F ++A +A+ +NG L
Sbjct: 61 QSMTQDELRSLFSSVGEVESAKLIRDKVAGHSLGYGFVNFVNPNDAERAISTLNG--LRL 118
Query: 91 HSKPIKVLIA 100
SK IKV A
Sbjct: 119 QSKTIKVSFA 128
>gi|34365067|emb|CAE45890.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 103 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 161
Query: 92 SKPIKV 97
+P+KV
Sbjct: 162 -RPMKV 166
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 11 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 54
>gi|426241412|ref|XP_004014585.1| PREDICTED: RNA-binding protein 39 isoform 6 [Ovis aries]
gi|426241416|ref|XP_004014587.1| PREDICTED: RNA-binding protein 39 isoform 8 [Ovis aries]
Length = 373
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 103 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELTG- 161
Query: 92 SKPIKV 97
+P+KV
Sbjct: 162 -RPMKV 166
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 11 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 54
>gi|410928271|ref|XP_003977524.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Takifugu rubripes]
Length = 358
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ ++ DL FS +G I R + D+ +G S+GVA+IRF K SEA A++ +NG P
Sbjct: 150 RTASQQDLEDMFSHYGRIINSRVLVDQASGVSRGVAFIRFDKRSEAEDAIKHLNGHTPPG 209
Query: 91 HSKPIKVLIAAKLEFKEGYRGGQKISVQY 119
++PI V A RG Q +S Y
Sbjct: 210 SAEPITVKFATN---PNQARGSQVMSQMY 235
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G++ E L Q F PFG + ++ ++D NT + KG ++ S EAA A+ +
Sbjct: 278 IFIYNLGQEADEAILWQLFGPFGAVVNVKVIRDFNTSKCKGFGFVTMSNYEEAAMAIHSL 337
Query: 84 NG 85
NG
Sbjct: 338 NG 339
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 18 DEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
DE + L + + +++++LR FS G+++ + ++D+ G S G ++ F S+A
Sbjct: 50 DEDARTNLIVNYLPQSMSQEELRSLFSSVGDVESAKLIRDKVAGHSLGYGFVNFVNPSDA 109
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A+ +NG L SK +KV A
Sbjct: 110 VRAINTLNG--LRLQSKTLKVSYA 131
>gi|158429066|pdb|2JRS|A Chain A, Solution Nmr Structure Of Caper Rrm2 Domain. Northeast
Structural Genomics Target Hr4730a
Length = 108
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 37 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELA-- 94
Query: 92 SKPIKV 97
+P+KV
Sbjct: 95 GRPMKV 100
>gi|85376478|gb|ABC70476.1| bruno-like [Schmidtea mediterranea]
Length = 404
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 16/130 (12%)
Query: 4 NYRINTHDRSREYNDEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
N I HD +++LFI + K+ +EDD+RQ P+G I+ +KD G S
Sbjct: 24 NIIIQNHDE---------NTKLFIGMLNKNQSEDDVRQLCEPYGCIKNCMILKDS-YGNS 73
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQY--- 119
KG A++ ++ + EA A+E +NG + I A+L E R +K+ +Q+
Sbjct: 74 KGCAFVTYNNSDEANMAIESLNGMKTSMACPELGSCIVARLADNEQERQLRKMQMQFPAI 133
Query: 120 --TSPQSAAY 127
+PQ+ Y
Sbjct: 134 QLLTPQNVGY 143
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 20 PPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
P LFI +D + L Q F+PFGN+ + DR T +SK ++ F S A
Sbjct: 317 PEGCNLFIYHLPQDFGDAALAQLFTPFGNVISAKVYLDRATNQSKCFGFVSFDNASNAEA 376
Query: 79 AVEEMNG 85
A+ MNG
Sbjct: 377 AIRGMNG 383
>gi|226496497|ref|NP_001150207.1| LOC100283837 [Zea mays]
gi|195621336|gb|ACG32498.1| nucleolin [Zea mays]
gi|195637560|gb|ACG38248.1| nucleolin [Zea mays]
gi|223948323|gb|ACN28245.1| unknown [Zea mays]
gi|413917478|gb|AFW57410.1| nucleolin [Zea mays]
Length = 140
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 21 PHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
P LF+ K T + LR+ F+ FG + R V DR +G SKG ++R++ T EAAK
Sbjct: 33 PSPNLFVSGLSKRTTSEGLREAFAEFGEVLHARVVTDRVSGFSKGFGFVRYATTEEAAKG 92
Query: 80 VEEMNGEFL 88
+E +G+FL
Sbjct: 93 IEGKDGKFL 101
>gi|169625220|ref|XP_001806014.1| hypothetical protein SNOG_15877 [Phaeosphaeria nodorum SN15]
gi|111055595|gb|EAT76715.1| hypothetical protein SNOG_15877 [Phaeosphaeria nodorum SN15]
Length = 330
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 53/81 (65%), Gaps = 5/81 (6%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLFI L G +VT+D L + FS + ++ + R V+D+ + +SK ++ FS T +
Sbjct: 183 DPMHPRLFIGNLAG-EVTDDSLHKAFSKYPSLVKARVVRDKKSTKSKSYGFVSFSDTDDY 241
Query: 77 AKAVEEMNGEFLPNHSKPIKV 97
+A +EMNG+++ +H P+K+
Sbjct: 242 FRAFKEMNGKYIGSH--PVKL 260
>gi|26390405|dbj|BAC25892.1| unnamed protein product [Mus musculus]
Length = 358
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N S + D H +F+ ++T +D++ F+PFG I + R VKD
Sbjct: 55 MGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMA 114
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A+++M G++L
Sbjct: 115 TGKSKGYGFVSFFNKWDAENAIQQMGGQWL 144
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +TE +RQ FSPFG I EIR D KG +++RFS AA A+ +
Sbjct: 188 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSV 241
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 242 NGTTIEGH 249
>gi|58865762|ref|NP_001012096.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|56268852|gb|AAH87064.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|149036619|gb|EDL91237.1| rCG56007, isoform CRA_c [Rattus norvegicus]
Length = 375
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N S + D H +F+ ++T +D++ F+PFG I + R VKD
Sbjct: 72 MGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMA 131
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A+++M G++L
Sbjct: 132 TGKSKGYGFVSFFNKWDAENAIQQMGGQWL 161
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +TE +RQ FSPFG I EIR D KG ++IRFS AA A+ +
Sbjct: 205 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFIRFSSHESAAHAIVSV 258
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 259 NGTTIEGH 266
>gi|1655901|gb|AAB17967.1| elav G homolog [Mus musculus]
Length = 326
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ G P
Sbjct: 115 RTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFIGHKPPG 174
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 175 SSEPITVKFAA 185
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G+D E L Q F PFG + ++ ++D NT + KG ++ + E+A A+ +
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIASL 305
Query: 84 NG 85
NG
Sbjct: 306 NG 307
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++LR FS G ++ + ++D+ G S G ++ + +A +A+ +NG L
Sbjct: 29 QNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNG--LRL 86
Query: 91 HSKPIKV 97
SK IKV
Sbjct: 87 QSKTIKV 93
>gi|125543335|gb|EAY89474.1| hypothetical protein OsI_11005 [Oryza sativa Indica Group]
Length = 173
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 15 EYNDEPPHS--RLFILCGKDVTEDD-LRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
E ++ PP + +LFI +T D+ L+ F+PFG + E + + DR +G SKG ++R++
Sbjct: 57 EVSNVPPLTAPKLFISGLSRLTTDEKLKNAFAPFGQLLEAKVITDRISGRSKGFGFVRYA 116
Query: 72 KTSEAAKAVEEMNGEFL 88
EA A +EMN +FL
Sbjct: 117 TLEEAENARQEMNAKFL 133
>gi|407928385|gb|EKG21243.1| hypothetical protein MPH_01435 [Macrophomina phaseolina MS6]
Length = 378
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G +VT++ L + FS F +IQ+ R V+D+ T +SKG ++ FS +
Sbjct: 248 DPAHFRLFVGNLAG-EVTDESLHKAFSRFPSIQKARVVRDKRTTKSKGYGFVSFSNGDDY 306
Query: 77 AKAVEEMNGEFLPNH 91
+A +EM G+++ +H
Sbjct: 307 FQAAKEMQGKYIGSH 321
>gi|355715684|gb|AES05403.1| RNA binding motif protein 39 [Mustela putorius furo]
Length = 271
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 140 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 198
Query: 92 SKPIKV 97
+P+KV
Sbjct: 199 -RPMKV 203
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 48 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 91
>gi|302770274|ref|XP_002968556.1| hypothetical protein SELMODRAFT_169951 [Selaginella moellendorffii]
gi|302788312|ref|XP_002975925.1| hypothetical protein SELMODRAFT_175329 [Selaginella moellendorffii]
gi|300156201|gb|EFJ22830.1| hypothetical protein SELMODRAFT_175329 [Selaginella moellendorffii]
gi|300164200|gb|EFJ30810.1| hypothetical protein SELMODRAFT_169951 [Selaginella moellendorffii]
Length = 477
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 20 PPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PPH + G +D EDDLR+ SP G I E+R +KD+ TG +KG A++ ++ A
Sbjct: 98 PPHGSEVFIGGVTRDTNEDDLRELCSPCGEIFEVRILKDKETGNNKGYAFVTYTNRETAE 157
Query: 78 KAVEEM 83
KA+E +
Sbjct: 158 KAIETL 163
>gi|255555393|ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223542114|gb|EEF43658.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 644
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 10/131 (7%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDD-LRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
+E D+ + L+I D DD L+Q FSPFG I + ++D N G S+G ++ FS
Sbjct: 297 KEAADKFQGANLYIKNLDDSIGDDRLKQLFSPFGTITSCKVMRDPN-GISRGSGFVAFST 355
Query: 73 TSEAAKAVEEMNGEFLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKF 132
EA+KA+ EMNG+ + SKP+ V +A + KE R ++ Q++ + A A
Sbjct: 356 PEEASKALMEMNGKMV--VSKPLYVALAQR---KEDRRA--RLQAQFSQIRPVAMAPSVA 408
Query: 133 HGF-AYPPGIP 142
YPPG P
Sbjct: 409 PRMPMYPPGGP 419
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
K + L FS FGNI + D ++G+SKG +++F A KA+E++NG L
Sbjct: 121 KGIDHKALHDTFSAFGNILSCKVATD-SSGQSKGYGFVQFDNEESAQKAIEKLNGMLL 177
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
TE+DL++ F +G I ++D + G++K ++ F +AA AVE +NG+ +
Sbjct: 214 TTEEDLKKAFGEYGTITSAVVMRDGD-GKTKCFGFVNFENADDAATAVEALNGKKFDD-- 270
Query: 93 KPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHG 134
K K + K K+ + QS A DKF G
Sbjct: 271 ---KEWFVGKAQKKNERENELKVRFE----QSMKEAADKFQG 305
>gi|148666754|gb|EDK99170.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_d
[Mus musculus]
Length = 385
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N S + D H +F+ ++T +D++ F+PFG I + R VKD
Sbjct: 82 MGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMA 141
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A+++M G++L
Sbjct: 142 TGKSKGYGFVSFFNKWDAENAIQQMGGQWL 171
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +TE +RQ FSPFG I EIR D KG +++RFS AA A+ +
Sbjct: 215 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSV 268
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 269 NGTTIEGH 276
>gi|323448247|gb|EGB04148.1| hypothetical protein AURANDRAFT_70409 [Aureococcus anophagefferens]
Length = 616
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 39 RQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVL 98
R+ F+ +G I R +++ TG S+G ++ FS EAAKAV EMN + + KPI V
Sbjct: 309 REHFTEYGTITSARVMREPATGTSRGFGFVCFSSPEEAAKAVTEMNNKLV--LGKPIFVA 366
Query: 99 IAAKLEFKEGYRGGQKISVQYTSPQSAAY--ARDKFHGFAYPPGIPMVVVPDFSYGLPRN 156
+A + E + Q + + SA Y A + P G PM + P G+P
Sbjct: 367 LAQRKEVRRAQLEAQHAQRLHPAHLSAPYGAAMPIMYAAGAPGGHPMGMAPQGHPGVPIA 426
Query: 157 G 157
G
Sbjct: 427 G 427
>gi|307178104|gb|EFN66931.1| Nucleolysin TIAR [Camponotus floridanus]
Length = 393
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+D+ ++N T ++ D H +F+ ++ L++ F+PFG I R V+D
Sbjct: 72 LDKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDP 131
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
T +SKG A++ F K SEA A+ MNG++L
Sbjct: 132 QTLKSKGYAFVSFVKKSEAEAAINAMNGQWL 162
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 34/140 (24%)
Query: 16 YNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
YN P + + CG +T++ +++ FSPFG IQ+IR KD KG A+I+F+
Sbjct: 198 YNQSSP-TNCTVYCGGFTNGITDELIKKTFSPFGTIQDIRVFKD------KGYAFIKFTT 250
Query: 73 TSEAAKAVE-----EMNGEFL---------------PNHSKPIKVLIAAKLEFKEGYRGG 112
A A+E E+NG + PN + + + A ++ GY G
Sbjct: 251 KEAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQQVTAGVGQYAYGY--G 308
Query: 113 QKISVQYTSPQSAAYARDKF 132
Q++ Y PQ + +F
Sbjct: 309 QQMGYWY--PQGYPQMQGQF 326
>gi|221041852|dbj|BAH12603.1| unnamed protein product [Homo sapiens]
Length = 337
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 103 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 161
Query: 92 SKPIKV 97
+P+KV
Sbjct: 162 -RPMKV 166
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 11 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 54
>gi|148666756|gb|EDK99172.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_f
[Mus musculus]
Length = 375
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N S + D H +F+ ++T +D++ F+PFG I + R VKD
Sbjct: 72 MGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMA 131
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A+++M G++L
Sbjct: 132 TGKSKGYGFVSFFNKWDAENAIQQMGGQWL 161
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +TE +RQ FSPFG I EIR D KG +++RFS AA A+ +
Sbjct: 205 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSV 258
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 259 NGTTIEGH 266
>gi|255760009|ref|NP_001157550.1| nucleolysin TIA-1 isoform 2 [Mus musculus]
gi|28386187|gb|AAH46812.1| Tia1 protein [Mus musculus]
Length = 377
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N S + D H +F+ ++T +D++ F+PFG I + R VKD
Sbjct: 74 MGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMA 133
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A+++M G++L
Sbjct: 134 TGKSKGYGFVSFFNKWDAENAIQQMGGQWL 163
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +TE +RQ FSPFG I EIR D KG +++RFS AA A+ +
Sbjct: 207 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSV 260
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 261 NGTTIEGH 268
>gi|413921449|gb|AFW61381.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
Length = 465
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 20 PPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PPH + G +D+TE+DLR+ P G I E+R KD++T E+KG A++ F A
Sbjct: 101 PPHGSEVFIGGLPRDITEEDLRELCEPLGEIYEVRLTKDKDTKENKGFAFVTFMDKEAAQ 160
Query: 78 KAVEEMN 84
+A+E++
Sbjct: 161 RAIEDVQ 167
>gi|302660221|ref|XP_003021792.1| RNP domain protein [Trichophyton verrucosum HKI 0517]
gi|291185707|gb|EFE41174.1| RNP domain protein [Trichophyton verrucosum HKI 0517]
Length = 439
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 19 EPPHSRLFILCGK---DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
+P H RLF CG +VT+D L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 296 DPAHFRLF--CGNLAGEVTDDSLLKAFSKYPSVQKARVIRDKRTEKSKGYGFVSFSDGDD 353
Query: 76 AAKAVEEMNGEFLPNH 91
KA EM G+++ +H
Sbjct: 354 YFKAAREMQGKYIGSH 369
>gi|115491713|ref|XP_001210484.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
gi|114197344|gb|EAU39044.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
Length = 478
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 165 RVNWAYQSNNTNKEDTSNHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRS 224
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + S+A KA+ M+GE+L
Sbjct: 225 RGYGFVAFRERSDAEKALSSMDGEWL 250
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY--IRFSKTSEA 76
P+ R + G D VTED L+Q F G++ ++ + D+N SKG Y + F A
Sbjct: 88 PNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAA 147
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A++ +NG + H I+V A
Sbjct: 148 ERAMQTLNGRRI--HQSEIRVNWA 169
>gi|298710157|emb|CBJ31867.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 400
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 11 DRSREYNDE---PPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGV 65
+R R + + P + LF+ L G +T+ DL F+PFG + + DR+TGESKG
Sbjct: 314 ERGRRWAKQSVGPTGANLFVYYLPGS-LTDADLATAFAPFGEVLSAKVYYDRDTGESKGF 372
Query: 66 AYIRFSKTSEAAKAVEEMNGEFL 88
++ +SK EA A+ MNG F+
Sbjct: 373 GFVSYSKPDEAEAAISSMNGFFI 395
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 24 RLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LF+ + K E+D R F PFG +I ++DRN G SKG A++R+ A+ A+E
Sbjct: 60 KLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRN-GFSKGCAFVRYESVKSASDAIEA 118
Query: 83 MNGE-FLPNHSKPIKVLIA 100
++ + +P + + V +A
Sbjct: 119 LHDKHIMPGGFRTLVVTVA 137
>gi|212275376|ref|NP_001130564.1| uncharacterized protein LOC100191663 [Zea mays]
gi|194689494|gb|ACF78831.1| unknown [Zea mays]
gi|219887513|gb|ACL54131.1| unknown [Zea mays]
gi|238010456|gb|ACR36263.1| unknown [Zea mays]
gi|413921450|gb|AFW61382.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
gi|413921451|gb|AFW61383.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
gi|413921452|gb|AFW61384.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
gi|413921453|gb|AFW61385.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
Length = 467
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 20 PPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PPH + G +D+TE+DLR+ P G I E+R KD++T E+KG A++ F A
Sbjct: 101 PPHGSEVFIGGLPRDITEEDLRELCEPLGEIYEVRLTKDKDTKENKGFAFVTFMDKEAAQ 160
Query: 78 KAVEEMN 84
+A+E++
Sbjct: 161 RAIEDVQ 167
>gi|291386623|ref|XP_002709696.1| PREDICTED: TIA1 cytotoxic granule-associated RNA binding
protein-like [Oryctolagus cuniculus]
Length = 386
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N S + D H +F+ ++T +D++ F+PFG I + R VKD
Sbjct: 83 MGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMA 142
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A+++M G++L
Sbjct: 143 TGKSKGYGFVSFFNKWDAENAIQQMGGQWL 172
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y NT S E ++ S + CG +TE +RQ FSPFG I EIR D
Sbjct: 193 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD---- 248
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 249 --KGYSFVRFNSHESAAHAIVSVNGTTIEGH 277
>gi|148226721|ref|NP_001086950.1| RNA binding motif protein 39 [Xenopus laevis]
gi|50414893|gb|AAH77813.1| Rnpc2-prov protein [Xenopus laevis]
Length = 540
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 259 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 317
Query: 92 SKPIKV 97
+P+KV
Sbjct: 318 -RPMKV 322
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 167 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFLDQSSVPLAI 210
>gi|301758210|ref|XP_002914948.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2 [Ailuropoda
melanoleuca]
gi|410954993|ref|XP_003984143.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Felis catus]
Length = 375
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N S + D H +F+ ++T +D++ F+PFG I + R VKD
Sbjct: 72 MGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMA 131
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A+++M G++L
Sbjct: 132 TGKSKGYGFVSFFNKWDAENAIQQMGGQWL 161
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y NT S E ++ S + CG +TE +RQ FSPFG I EIR D
Sbjct: 182 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD---- 237
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 238 --KGYSFVRFNSHESAAHAIVSVNGTTIEGH 266
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 20 PPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
P ++LFI E LR+ FS +G + + R + DR TG S+G +I ++ EA+
Sbjct: 39 APSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASS 98
Query: 79 AVEEMNGEFLPNHSKPIKVLIA 100
A++ ++G+ L H +PI+V A
Sbjct: 99 AIQALDGQDL--HGRPIRVNYA 118
>gi|119596573|gb|EAW76167.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Homo
sapiens]
Length = 423
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 260 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 318
Query: 92 SKPIKV 97
+P+KV
Sbjct: 319 -RPMKV 323
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 168 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 211
>gi|340055699|emb|CCC50020.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 590
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S+E +DE S LF+ + VT+ L + F+PFG IQ + + + NTG+S+G+A+++F+
Sbjct: 257 SQELDDEM-RSNLFVSGLHQHVTDKQLHELFAPFGEIQSAKVMLNINTGKSRGIAFVKFA 315
Query: 72 KTSEAAKAVEEMN 84
K +A KA+E +N
Sbjct: 316 KVGDAEKAMEALN 328
>gi|449265754|gb|EMC76900.1| RNA-binding protein 39, partial [Columba livia]
Length = 423
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 161 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 219
Query: 92 SKPIKV 97
+P+KV
Sbjct: 220 -RPMKV 224
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 69 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 112
>gi|344283909|ref|XP_003413713.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Loxodonta
africana]
Length = 375
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N S + D H +F+ ++T +D++ F+PFG I + R VKD
Sbjct: 72 MGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMA 131
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A+++M G++L
Sbjct: 132 TGKSKGYGFVSFFNKWDAENAIQQMGGQWL 161
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y NT S E ++ S + CG +TE +RQ FSPFG I EIR D
Sbjct: 182 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD---- 237
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 238 --KGYSFVRFNSHESAAHAIVSVNGTTIEGH 266
>gi|46108456|ref|XP_381286.1| hypothetical protein FG01110.1 [Gibberella zeae PH-1]
Length = 582
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 52/81 (64%), Gaps = 5/81 (6%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G + T+D L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 209 DPAHLRLFVGNLAG-ETTDDALLKAFSRWQSVQKARVIRDKRTSKSKGYGFVSFSDADDF 267
Query: 77 AKAVEEMNGEFLPNHSKPIKV 97
+A +EMNG+++ +H P+ V
Sbjct: 268 FQAAKEMNGKYIQSH--PVTV 286
>gi|403281374|ref|XP_003932163.1| PREDICTED: RNA-binding protein 39 [Saimiri boliviensis boliviensis]
Length = 502
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 260 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 318
Query: 92 SKPIKV 97
+P+KV
Sbjct: 319 -RPMKV 323
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 168 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 211
>gi|330802792|ref|XP_003289397.1| hypothetical protein DICPUDRAFT_80171 [Dictyostelium purpureum]
gi|325080515|gb|EGC34067.1| hypothetical protein DICPUDRAFT_80171 [Dictyostelium purpureum]
Length = 628
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 17 NDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
N + P + LFI DVT++ LR+ F P+G I E + + D+N G+SK ++RF SE
Sbjct: 176 NSKNPSNNLFIKPLPADVTDEQLRKLFEPYGKIVECKVMLDQN-GQSKFAGFVRFFNDSE 234
Query: 76 AAKAVEEMNGEFLPNHSKPIKVLIA 100
AA A++ MNG + S P+ V A
Sbjct: 235 AASAIDAMNGIKITKDSYPLVVKYA 259
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 20 PPHSRLFILCGKDVTEDD-LRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
P + LF+ +D L Q FS +G +Q +R + D++TGE+KG +++F +A K
Sbjct: 508 PNDTNLFVFHLPPFIDDAYLFQLFSQYGKLQSVRVITDKDTGENKGYGFVKFYNREDAFK 567
Query: 79 AVEEMNG 85
+EMNG
Sbjct: 568 CQKEMNG 574
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D T++DL + FS +GN+ + + D G S G ++RFS +E+ A++E++G
Sbjct: 104 DFTDEDLAKLFSAYGNVISSKVMIDP-KGNSYGYGFVRFSNPNESQAAIKELDG 156
>gi|295871070|gb|ADG49460.1| CG4396 [Drosophila simulans]
gi|295871072|gb|ADG49461.1| CG4396 [Drosophila simulans]
gi|295871074|gb|ADG49462.1| CG4396 [Drosophila simulans]
gi|295871076|gb|ADG49463.1| CG4396 [Drosophila simulans]
gi|295871078|gb|ADG49464.1| CG4396 [Drosophila simulans]
gi|295871080|gb|ADG49465.1| CG4396 [Drosophila simulans]
gi|295871082|gb|ADG49466.1| CG4396 [Drosophila simulans]
gi|295871084|gb|ADG49467.1| CG4396 [Drosophila simulans]
gi|295871086|gb|ADG49468.1| CG4396 [Drosophila simulans]
gi|295871088|gb|ADG49469.1| CG4396 [Drosophila simulans]
gi|295871090|gb|ADG49470.1| CG4396 [Drosophila simulans]
gi|295871092|gb|ADG49471.1| CG4396 [Drosophila simulans]
gi|295871094|gb|ADG49472.1| CG4396 [Drosophila simulans]
gi|295871096|gb|ADG49473.1| CG4396 [Drosophila simulans]
gi|295871098|gb|ADG49474.1| CG4396 [Drosophila simulans]
gi|295871100|gb|ADG49475.1| CG4396 [Drosophila simulans]
gi|295871102|gb|ADG49476.1| CG4396 [Drosophila simulans]
gi|295871104|gb|ADG49477.1| CG4396 [Drosophila simulans]
gi|295871106|gb|ADG49478.1| CG4396 [Drosophila simulans]
gi|295871108|gb|ADG49479.1| CG4396 [Drosophila simulans]
gi|295871110|gb|ADG49480.1| CG4396 [Drosophila simulans]
gi|295871112|gb|ADG49481.1| CG4396 [Drosophila simulans]
gi|295871114|gb|ADG49482.1| CG4396 [Drosophila simulans]
gi|295871116|gb|ADG49483.1| CG4396 [Drosophila simulans]
gi|295871118|gb|ADG49484.1| CG4396 [Drosophila melanogaster]
gi|295871120|gb|ADG49485.1| CG4396 [Drosophila melanogaster]
gi|295871122|gb|ADG49486.1| CG4396 [Drosophila melanogaster]
gi|295871124|gb|ADG49487.1| CG4396 [Drosophila melanogaster]
gi|295871126|gb|ADG49488.1| CG4396 [Drosophila melanogaster]
gi|295871128|gb|ADG49489.1| CG4396 [Drosophila melanogaster]
gi|295871130|gb|ADG49490.1| CG4396 [Drosophila melanogaster]
gi|295871132|gb|ADG49491.1| CG4396 [Drosophila melanogaster]
gi|295871134|gb|ADG49492.1| CG4396 [Drosophila melanogaster]
gi|295871136|gb|ADG49493.1| CG4396 [Drosophila melanogaster]
gi|295871138|gb|ADG49494.1| CG4396 [Drosophila melanogaster]
gi|295871140|gb|ADG49495.1| CG4396 [Drosophila melanogaster]
gi|295871142|gb|ADG49496.1| CG4396 [Drosophila melanogaster]
gi|295871144|gb|ADG49497.1| CG4396 [Drosophila melanogaster]
gi|295871146|gb|ADG49498.1| CG4396 [Drosophila melanogaster]
gi|295871148|gb|ADG49499.1| CG4396 [Drosophila melanogaster]
gi|295871150|gb|ADG49500.1| CG4396 [Drosophila melanogaster]
gi|295871152|gb|ADG49501.1| CG4396 [Drosophila melanogaster]
gi|295871154|gb|ADG49502.1| CG4396 [Drosophila melanogaster]
gi|295871156|gb|ADG49503.1| CG4396 [Drosophila melanogaster]
gi|295871158|gb|ADG49504.1| CG4396 [Drosophila melanogaster]
gi|295871160|gb|ADG49505.1| CG4396 [Drosophila melanogaster]
gi|295871162|gb|ADG49506.1| CG4396 [Drosophila melanogaster]
Length = 123
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++++ DL F+ FG I R + D +G SKGV +IRF + +EA +A++E+NG+
Sbjct: 19 KNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAIQELNGKTPKG 78
Query: 91 HSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYAR 129
+++PI V A + ++ Y +PQ+AA R
Sbjct: 79 YAEPITVKFANNPSNSAKAQIAPPLTA-YLTPQAAAATR 116
>gi|159164088|pdb|2DGO|A Chain A, Solution Structure Of The Rna Binding Domain In
Cytotoxic Granule-Associated Rna Binding Protein 1
gi|211938969|pdb|2RNE|A Chain A, Solution Structure Of The Second Rna Recognition Motif
(Rrm) Of Tia-1
Length = 115
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 6 SGQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFF 65
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+++M G++L
Sbjct: 66 NKWDAENAIQQMGGQWL 82
>gi|70938791|ref|XP_740024.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56517446|emb|CAH81784.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 412
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 39/54 (72%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
++TE +L+Q F+PFG+I E+ +D TG+SKG +I+F K SEA +A+ MNG
Sbjct: 259 NITEQELKQLFNPFGDILEVEIHRDPYTGKSKGFGFIQFHKASEAIEAMTVMNG 312
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 35 EDDLRQGFSPF-GNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSK 93
E D+ + FS G +++I+C+KD+ +G+SKGVAY+ F KA+ NG L N +
Sbjct: 160 ERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQESVIKAL-AANGYMLKN--R 216
Query: 94 PIKV 97
PIKV
Sbjct: 217 PIKV 220
>gi|391330636|ref|XP_003739762.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 364
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 18 DEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ + DLR+ FSPFG I + R VKD T +SKG ++ F+ +A
Sbjct: 99 DTSKHHHIFVGDLSPQIETSDLREAFSPFGEISDCRVVKDATTQKSKGYGFVSFTNKQDA 158
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAA-KLEFKE--GYRGGQKISVQY 119
A+ M+G +L S+ I+ A+ K KE Y GG ++ Y
Sbjct: 159 ENAIHTMDGSWLG--SRAIRTNWASRKPNHKETGSYIGGHHRALNY 202
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 13/81 (16%)
Query: 7 INTHDRSREYND---EPPHSRLFILCG----KDVTEDDLRQGFSPFGNIQEIRCVKDRNT 59
I H R+ Y++ + S + CG +ED LRQ F FG I +IR KD
Sbjct: 193 IGGHHRALNYDEVFAQSSPSNCTVYCGGLNQMASSEDFLRQAFDEFGEIVDIRLFKD--- 249
Query: 60 GESKGVAYIRFSKTSEAAKAV 80
KG A+I+F+ A +A+
Sbjct: 250 ---KGYAFIKFNSKESACRAI 267
>gi|193785136|dbj|BAG54289.1| unnamed protein product [Homo sapiens]
Length = 506
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 236 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 294
Query: 92 SKPIKV 97
+P+KV
Sbjct: 295 -RPMKV 299
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 144 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 187
>gi|170591004|ref|XP_001900261.1| RNA-binding protein [Brugia malayi]
gi|158592411|gb|EDP31011.1| RNA-binding protein, putative [Brugia malayi]
Length = 417
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +++ DL F PFG I R + D TG SKGV ++RF + SEA A++++NG+
Sbjct: 144 KTMSQLDLEALFKPFGQIITSRILSDNVTGISKGVGFVRFDRKSEAEDAIDKLNGKIPAG 203
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 204 CTEPITVKFA 213
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T++++ FS G I + V+D+ TG+S G ++ + + +A KAV +NG L N
Sbjct: 58 QNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGFVNYVRQEDAYKAVTSLNGLRLQN 117
Query: 91 HSKPIKVLIA 100
K IKV A
Sbjct: 118 --KTIKVSFA 125
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 34 TEDD-LRQGFSPFGNIQEIRC---VKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLP 89
TED L Q F PFG + ++ +KD +TG+ KG ++ + +A A+ +NG L
Sbjct: 338 TEDAVLWQLFGPFGAVLSVKAGIIIKDFSTGKCKGYGFVTMGQYEDAVTAITSLNGTQLG 397
Query: 90 NHS 92
N +
Sbjct: 398 NRT 400
>gi|296223620|ref|XP_002757701.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Callithrix
jacchus]
gi|403260488|ref|XP_003922703.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 375
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N S + D H +F+ ++T +D++ F+PFG I + R VKD
Sbjct: 72 MGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMA 131
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A+++M G++L
Sbjct: 132 TGKSKGYGFVSFFNKWDAENAIQQMGGQWL 161
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y NT S E ++ S + CG +TE +RQ FSPFG I EIR D
Sbjct: 182 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD---- 237
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 238 --KGYSFVRFNSHESAAHAIVSVNGTTIEGH 266
>gi|302922480|ref|XP_003053474.1| hypothetical protein NECHADRAFT_74653 [Nectria haematococca mpVI
77-13-4]
gi|256734415|gb|EEU47761.1| hypothetical protein NECHADRAFT_74653 [Nectria haematococca mpVI
77-13-4]
Length = 364
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 56/90 (62%), Gaps = 6/90 (6%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G + T+D L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 221 DPSHLRLFVGNLAG-ETTDDALLKAFSRWRSVQKARVIRDKRTSKSKGYGFVSFSDADDF 279
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAAKLEFK 106
+A +EMNG+++ +H P+ V+ A E K
Sbjct: 280 FQAAKEMNGKYIQSH--PV-VVRKANTEIK 306
>gi|194688256|gb|ACF78212.1| unknown [Zea mays]
gi|195643548|gb|ACG41242.1| hypothetical protein [Zea mays]
gi|414887461|tpg|DAA63475.1| TPA: hypothetical protein ZEAMMB73_038657 [Zea mays]
Length = 237
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 19 EPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
E P + + CG +V +D L + FS F + R V+D+ TG++KG ++ FS ++
Sbjct: 123 EWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTD 182
Query: 76 AAKAVEEMNGEFLPNHSKPIKV 97
A A++EMNG+++ N +PIK+
Sbjct: 183 LAAAIKEMNGKYVGN--RPIKL 202
>gi|195173668|ref|XP_002027609.1| GL22975 [Drosophila persimilis]
gi|194114534|gb|EDW36577.1| GL22975 [Drosophila persimilis]
Length = 385
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++++ DL F+ FG I R + D +G SKGV +IRF + +EA +A++E+NG+
Sbjct: 136 KNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAIQELNGKTPKG 195
Query: 91 HSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYAR 129
+++PI V A + ++ Y +PQ+AA R
Sbjct: 196 YAEPITVKFANNPSNSAKAQIAPPLTA-YLTPQAAAATR 233
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ ++D T + KG ++ + EA A++ +NG L N
Sbjct: 312 ETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGN 370
Score = 36.6 bits (83), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 17/96 (17%)
Query: 17 NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDR---------------NTGE 61
NDE + + + +T++++R FS G ++ + V+D+ G+
Sbjct: 21 NDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSVLPASLTALNPALQQGQ 80
Query: 62 SKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
S G ++ + + +A KAV +NG L N K IKV
Sbjct: 81 SLGYGFVNYVRAEDAEKAVNTLNGLRLQN--KVIKV 114
>gi|380816028|gb|AFE79888.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
gi|383421175|gb|AFH33801.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
Length = 375
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N S + D H +F+ ++T +D++ F+PFG I + R VKD
Sbjct: 72 MGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMA 131
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A+++M G++L
Sbjct: 132 TGKSKGYGFVSFFNKWDAENAIQQMGGQWL 161
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y NT S E ++ S + CG +TE +RQ FSPFG I EIR D
Sbjct: 182 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD---- 237
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 238 --KGYSFVRFNSHESAAHAIVSVNGTTIEGH 266
>gi|13278367|gb|AAH04000.1| Rbm39 protein [Mus musculus]
Length = 429
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 159 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 217
Query: 92 SKPIKV 97
+P+KV
Sbjct: 218 -RPMKV 222
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 67 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 110
>gi|119495558|ref|XP_001264561.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
gi|119412723|gb|EAW22664.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
Length = 477
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E S I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 164 RVNWAYQSNSTNKEDTSSHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRS 223
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + ++A KA+ M+GE+L
Sbjct: 224 RGYGFVAFRERADAEKALNAMDGEWL 249
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY--IRFSKTSEA 76
P+ R + G D VTED L+Q F G++Q ++ + D+N SKG Y + F A
Sbjct: 88 PNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNF-NSKGYNYGFVEFDDPGAA 146
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A++ +NG + H I+V A
Sbjct: 147 ERAMQTLNGRRI--HQSEIRVNWA 168
>gi|70995622|ref|XP_752566.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus Af293]
gi|66850201|gb|EAL90528.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus Af293]
gi|159131321|gb|EDP56434.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus A1163]
Length = 489
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E S I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 162 RVNWAYQSNSANKEDTSSHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRS 221
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + ++A KA+ M+GE+L
Sbjct: 222 RGYGFVAFRERADAEKALNAMDGEWL 247
>gi|426245729|ref|XP_004016657.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Ovis
aries]
Length = 174
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 24 RLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI + E L F +G+I E+ +KDR T +S+G A+I F ++A AV +
Sbjct: 9 KLFIGGLNHETDEKSLEAAFGKYGHISEVLLMKDRETNKSRGFAFITFESPADAKAAVRD 68
Query: 83 MNGEFLPNHSKPIKVLIAAKLEFKEGYRG 111
MNG+ L K IKV A K F+ G RG
Sbjct: 69 MNGKSL--DGKAIKVAQATKPAFESGRRG 95
>gi|190402270|gb|ACE77680.1| RNA binding motif protein 39 isoform a (predicted) [Sorex araneus]
Length = 435
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 260 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 318
Query: 92 SKPIKV 97
+P+KV
Sbjct: 319 -RPMKV 323
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 168 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 211
>gi|332249061|ref|XP_003273679.1| PREDICTED: RNA-binding protein 39 [Nomascus leucogenys]
Length = 432
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 168 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 226
Query: 92 SKPIKV 97
+P+KV
Sbjct: 227 -RPMKV 231
>gi|310790906|gb|EFQ26439.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 384
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 57/91 (62%), Gaps = 7/91 (7%)
Query: 9 THDRSREYNDEPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVA 66
T D E+ +P H RLF+ L G +VT++ L + F+ + ++Q+ R ++D+ T +SKG
Sbjct: 227 TDDTLTEW--DPSHLRLFVGNLAG-EVTDESLLKAFARWKSVQKARVIRDKRTAKSKGYG 283
Query: 67 YIRFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
++ FS + +A +EMNG+++ +H P+ V
Sbjct: 284 FVSFSDADDFFQAAKEMNGKYIQSH--PVTV 312
>gi|126291198|ref|XP_001371677.1| PREDICTED: RNA-binding protein 39 isoform 2 [Monodelphis domestica]
Length = 533
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 260 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 318
Query: 92 SKPIKV 97
+P+KV
Sbjct: 319 -RPMKV 323
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 168 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 211
>gi|62857615|ref|NP_001016788.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|62201342|gb|AAH93451.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|89273890|emb|CAJ83908.1| RNA-binding region (RNP1, RRM) containing 2 [Xenopus (Silurana)
tropicalis]
Length = 542
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 261 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 319
Query: 92 SKPIKV 97
+P+KV
Sbjct: 320 -RPMKV 324
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 169 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDQSSVPLAI 212
>gi|119596572|gb|EAW76166.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_e [Homo
sapiens]
Length = 445
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 260 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 318
Query: 92 SKPIKV 97
+P+KV
Sbjct: 319 -RPMKV 323
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 168 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 211
>gi|426223384|ref|XP_004005855.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Ovis aries]
Length = 375
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N S + D H +F+ ++T +D++ F+PFG I + R VKD
Sbjct: 72 MGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMA 131
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A+++M G++L
Sbjct: 132 TGKSKGYGFVSFFNKWDAENAIQQMGGQWL 161
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y NT S E ++ S + CG +TE +RQ FSPFG I EIR D
Sbjct: 182 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD---- 237
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 238 --KGYSFVRFNSHESAAHAIVSVNGTTIEGH 266
>gi|354491765|ref|XP_003508025.1| PREDICTED: nucleolysin TIAR-like [Cricetulus griseus]
Length = 285
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N S + D H +F+ ++T +D++ F+PFG I + R VKD
Sbjct: 72 MGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMA 131
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A+++M G++L
Sbjct: 132 TGKSKGYGFVSFFNKWDAENAIQQMGGQWL 161
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 17/99 (17%)
Query: 4 NYRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNT 59
Y +NT S E + S + CG +TE +RQ FSPFG I EIR D
Sbjct: 181 TYELNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQILEIRVFPD--- 237
Query: 60 GESKGVAYIRFSKTSE-------AAKAVEEMNGEFLPNH 91
KG ++IR +++S + + NG LP+
Sbjct: 238 ---KGYSFIRQAQSSAPWMGPNYSVPPPQGQNGSMLPSQ 273
>gi|18860091|ref|NP_572842.1| found in neurons, isoform A [Drosophila melanogaster]
gi|161077787|ref|NP_001096965.1| found in neurons, isoform B [Drosophila melanogaster]
gi|386764326|ref|NP_001245646.1| found in neurons, isoform C [Drosophila melanogaster]
gi|386764332|ref|NP_001245648.1| found in neurons, isoform E [Drosophila melanogaster]
gi|386764334|ref|NP_001245649.1| found in neurons, isoform F [Drosophila melanogaster]
gi|442616163|ref|NP_001259497.1| found in neurons, isoform G [Drosophila melanogaster]
gi|442616165|ref|NP_001259498.1| found in neurons, isoform H [Drosophila melanogaster]
gi|7230770|gb|AAF43091.1|AF239667_1 putative RNA binding protein [Drosophila melanogaster]
gi|22833123|gb|AAF48215.3| found in neurons, isoform A [Drosophila melanogaster]
gi|158031803|gb|ABW09403.1| found in neurons, isoform B [Drosophila melanogaster]
gi|289666819|gb|ADD16464.1| RT06063p1 [Drosophila melanogaster]
gi|383293359|gb|AFH07360.1| found in neurons, isoform C [Drosophila melanogaster]
gi|383293361|gb|AFH07362.1| found in neurons, isoform E [Drosophila melanogaster]
gi|383293362|gb|AFH07363.1| found in neurons, isoform F [Drosophila melanogaster]
gi|440216716|gb|AGB95339.1| found in neurons, isoform G [Drosophila melanogaster]
gi|440216717|gb|AGB95340.1| found in neurons, isoform H [Drosophila melanogaster]
Length = 356
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++++ DL F+ FG I R + D +G SKGV +IRF + +EA +A++E+NG+
Sbjct: 139 KNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAIQELNGKTPKG 198
Query: 91 HSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYAR 129
+++PI V A + ++ Y +PQ+AA R
Sbjct: 199 YAEPITVKFANNPSNSAKAQIAPPLTA-YLTPQAAAATR 236
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
+ E+ L Q F PFG +Q ++ ++D T + KG ++ + EA A++ +NG L N
Sbjct: 283 ETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNR 342
>gi|147900472|ref|NP_001086350.1| MGC81970 protein [Xenopus laevis]
gi|49522239|gb|AAH75146.1| MGC81970 protein [Xenopus laevis]
Length = 512
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 233 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 291
Query: 92 SKPIKV 97
+P+KV
Sbjct: 292 -RPMKV 296
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 141 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDQSSVPLAI 184
>gi|349604477|gb|AEQ00017.1| RNA-binding protein 39-like protein, partial [Equus caballus]
Length = 374
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 243 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 301
Query: 92 SKPIKV 97
+P+KV
Sbjct: 302 -RPMKV 306
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 151 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 194
>gi|281346065|gb|EFB21649.1| hypothetical protein PANDA_004543 [Ailuropoda melanoleuca]
Length = 497
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 227 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 285
Query: 92 SKPIKV 97
+P+KV
Sbjct: 286 -RPMKV 290
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 135 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 178
>gi|326931688|ref|XP_003211958.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like
[Meleagris gallopavo]
Length = 571
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 309 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 367
Query: 92 SKPIKV 97
+P+KV
Sbjct: 368 -RPMKV 372
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 217 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 260
>gi|326474449|gb|EGD98458.1| hypothetical protein TESG_08545 [Trichophyton tonsurans CBS 112818]
Length = 428
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 19 EPPHSRLFILCGK---DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
+P H RLF CG +VT+D L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 284 DPAHFRLF--CGNLAGEVTDDSLLKAFSKYPSVQKARVIRDKRTEKSKGYGFVSFSDGDD 341
Query: 76 AAKAVEEMNGEFLPNH 91
KA EM G+++ +H
Sbjct: 342 YFKAAREMQGKYIGSH 357
>gi|198467583|ref|XP_002134579.1| GA22283 [Drosophila pseudoobscura pseudoobscura]
gi|198149314|gb|EDY73206.1| GA22283 [Drosophila pseudoobscura pseudoobscura]
Length = 353
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++++ DL F+ FG I R + D +G SKGV +IRF + +EA +A++E+NG+
Sbjct: 136 KNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAIQELNGKTPKG 195
Query: 91 HSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYAR 129
+++PI V A + ++ Y +PQ+AA R
Sbjct: 196 YAEPITVKFANNPSNSAKAQIAPPLTA-YLTPQAAAATR 233
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
+ E+ L Q F PFG +Q ++ ++D T + KG ++ + EA A++ +NG L N
Sbjct: 280 ETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNR 339
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 17/96 (17%)
Query: 17 NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDR---------------NTGE 61
NDE + + + +T++++R FS G ++ + V+D+ G+
Sbjct: 21 NDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSVLPASLTALNPALQQGQ 80
Query: 62 SKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
S G ++ + + +A KAV +NG L N K IKV
Sbjct: 81 SLGYGFVNYVRAEDAEKAVNTLNGLRLQN--KVIKV 114
>gi|126291195|ref|XP_001371651.1| PREDICTED: RNA-binding protein 39 isoform 1 [Monodelphis domestica]
Length = 524
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 260 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 318
Query: 92 SKPIKV 97
+P+KV
Sbjct: 319 -RPMKV 323
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 168 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 211
>gi|188219593|ref|NP_071320.2| nucleolysin TIA-1 isoform p40 isoform 1 [Homo sapiens]
gi|114577932|ref|XP_001141475.1| PREDICTED: uncharacterized protein LOC459303 isoform 1 [Pan
troglodytes]
gi|397521826|ref|XP_003830987.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Pan paniscus]
gi|119620229|gb|EAW99823.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_a [Homo sapiens]
gi|410254976|gb|JAA15455.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298558|gb|JAA27879.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353837|gb|JAA43522.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 375
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N S + D H +F+ ++T +D++ F+PFG I + R VKD
Sbjct: 72 MGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMA 131
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A+++M G++L
Sbjct: 132 TGKSKGYGFVSFFNKWDAENAIQQMGGQWL 161
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y NT S E ++ S + CG +TE +RQ FSPFG I EIR D
Sbjct: 182 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD---- 237
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 238 --KGYSFVRFNSHESAAHAIVSVNGTTIEGH 266
>gi|134078881|emb|CAK40567.1| unnamed protein product [Aspergillus niger]
Length = 232
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G +VT+D L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 102 DPAHFRLFVGNLAG-EVTDDSLLKAFSKYTSVQKARVIRDKRTQKSKGYGFVSFSDGDDY 160
Query: 77 AKAVEEMNGEFLPNH 91
KA EM G+++ +H
Sbjct: 161 FKAAREMQGKYIGSH 175
>gi|296199709|ref|XP_002747282.1| PREDICTED: RNA-binding protein 39 isoform 5 [Callithrix jacchus]
Length = 504
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 234 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 292
Query: 92 SKPIKV 97
+P+KV
Sbjct: 293 -RPMKV 297
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 142 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 185
>gi|225713880|gb|ACO12786.1| Nucleolysin TIAR [Lepeophtheirus salmonis]
Length = 352
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 18 DEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ D+T + L+ F PFG I + + VKD T +SKG ++ F + ++A
Sbjct: 103 DTSQHHHIFVGDLSPDITTETLKNVFVPFGEISDYKVVKDMLTNKSKGYGFVSFVEKNDA 162
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAAK 102
A+E+MNG++L S+ I+ AA+
Sbjct: 163 QTAIEQMNGQWLG--SRAIRTNWAAR 186
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 27 ILCGKDVTEDD--LRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMN 84
+ CG + D+ +RQ FSPFG I EIR +D KG A++RF A A+ ++
Sbjct: 218 VYCGGLINSDENIIRQTFSPFGRILEIRYFRD------KGYAFVRFDNKESACNAIVALH 271
Query: 85 G 85
G
Sbjct: 272 G 272
>gi|194386036|dbj|BAG59582.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 233 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 291
Query: 92 SKPIKV 97
+P+KV
Sbjct: 292 -RPMKV 296
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 141 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 184
>gi|41581275|emb|CAE47924.1| oligouridylate binding protein, putative [Aspergillus fumigatus]
Length = 485
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E S I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 164 RVNWAYQSNSANKEDTSSHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRS 223
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + ++A KA+ M+GE+L
Sbjct: 224 RGYGFVAFRERADAEKALNAMDGEWL 249
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY--IRFSKTSEA 76
P+ R + G D VTED L+Q F G++Q ++ + D+N SKG Y + F A
Sbjct: 88 PNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNF-NSKGYNYGFVEFDDPGAA 146
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A++ +NG + H I+V A
Sbjct: 147 ERAMQTLNGRRI--HQSEIRVNWA 168
>gi|395505312|ref|XP_003756986.1| PREDICTED: RNA-binding protein 39 [Sarcophilus harrisii]
Length = 557
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 293 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 351
Query: 92 SKPIKV 97
+P+KV
Sbjct: 352 -RPMKV 356
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 201 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 244
>gi|386764328|ref|NP_001245647.1| found in neurons, isoform D [Drosophila melanogaster]
gi|194895737|ref|XP_001978329.1| GG17743 [Drosophila erecta]
gi|195045911|ref|XP_001992055.1| GH24423 [Drosophila grimshawi]
gi|195397025|ref|XP_002057129.1| GJ16518 [Drosophila virilis]
gi|195447330|ref|XP_002071166.1| GK25647 [Drosophila willistoni]
gi|195478085|ref|XP_002100403.1| fne [Drosophila yakuba]
gi|190649978|gb|EDV47256.1| GG17743 [Drosophila erecta]
gi|193892896|gb|EDV91762.1| GH24423 [Drosophila grimshawi]
gi|194146896|gb|EDW62615.1| GJ16518 [Drosophila virilis]
gi|194167251|gb|EDW82152.1| GK25647 [Drosophila willistoni]
gi|194187927|gb|EDX01511.1| fne [Drosophila yakuba]
gi|307344716|gb|ADN43900.1| RT06051p [Drosophila melanogaster]
gi|383293360|gb|AFH07361.1| found in neurons, isoform D [Drosophila melanogaster]
Length = 353
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++++ DL F+ FG I R + D +G SKGV +IRF + +EA +A++E+NG+
Sbjct: 136 KNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAIQELNGKTPKG 195
Query: 91 HSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYAR 129
+++PI V A + ++ Y +PQ+AA R
Sbjct: 196 YAEPITVKFANNPSNSAKAQIAPPLTA-YLTPQAAAATR 233
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
+ E+ L Q F PFG +Q ++ ++D T + KG ++ + EA A++ +NG L N
Sbjct: 280 ETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNR 339
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 17/96 (17%)
Query: 17 NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDR---------------NTGE 61
NDE + + + +T++++R FS G ++ + V+D+ G+
Sbjct: 21 NDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSVLPASLTALNPALQQGQ 80
Query: 62 SKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
S G ++ + + +A KAV +NG L N K IKV
Sbjct: 81 SLGYGFVNYVRAEDAEKAVNTLNGLRLQN--KVIKV 114
>gi|119620231|gb|EAW99825.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_c [Homo sapiens]
Length = 144
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N S + D H +F+ ++T +D++ F+PFG I + R VKD
Sbjct: 7 MGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMA 66
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A+++M G++L
Sbjct: 67 TGKSKGYGFVSFFNKWDAENAIQQMGGQWL 96
>gi|118100450|ref|XP_425690.2| PREDICTED: RNA-binding protein 39 [Gallus gallus]
gi|363741409|ref|XP_003642487.1| PREDICTED: RNA-binding protein 39-like [Gallus gallus]
Length = 522
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 260 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 318
Query: 92 SKPIKV 97
+P+KV
Sbjct: 319 -RPMKV 323
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 168 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 211
>gi|326481515|gb|EGE05525.1| RNP domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 428
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 19 EPPHSRLFILCGK---DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
+P H RLF CG +VT+D L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 284 DPAHFRLF--CGNLAGEVTDDSLLKAFSKYPSVQKARVIRDKRTEKSKGYGFVSFSDGDD 341
Query: 76 AAKAVEEMNGEFLPNH 91
KA EM G+++ +H
Sbjct: 342 YFKAAREMQGKYIGSH 357
>gi|281201992|gb|EFA76199.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 874
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 2 DRNYRINTHDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
D ++N + + D RLFI VTEDDL++ F PFG + EI DRN+
Sbjct: 305 DDEAKVNDYAKQEVEEDVGETGRLFIRNLAYTVTEDDLKKLFEPFGKLSEIYIPIDRNSK 364
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPN---HSKPIKV 97
+SKG+A++ F A +A+ EM+G+ + H P K+
Sbjct: 365 KSKGIAFLLFMIPENAMRAMTEMDGKAIQGRLVHILPAKI 404
>gi|224077247|ref|XP_002192236.1| PREDICTED: RNA-binding protein 39 [Taeniopygia guttata]
Length = 522
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 260 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 318
Query: 92 SKPIKV 97
+P+KV
Sbjct: 319 -RPMKV 323
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 168 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 211
>gi|66801427|ref|XP_629639.1| hypothetical protein DDB_G0292472 [Dictyostelium discoideum AX4]
gi|60463019|gb|EAL61215.1| hypothetical protein DDB_G0292472 [Dictyostelium discoideum AX4]
Length = 550
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
VT +L++ F FG++ + + + D +TG S+ V ++ FS+ EA KAV MNG +P S
Sbjct: 208 VTNANLKEVFGSFGDVIDTKILTDPDTGASRCVGFVHFSQRREALKAVSSMNGANIPFQS 267
Query: 93 KPIKVLIAAKL 103
PI V A +L
Sbjct: 268 TPIYVKFANQL 278
>gi|383862671|ref|XP_003706807.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3
[Megachile rotundata]
Length = 601
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 17/126 (13%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+ ++ LR+ F+PFG I + + + G SKG ++ FS EA KAV EMNG + +
Sbjct: 278 INDERLRREFAPFGTITSAKVMME--DGRSKGFGFVCFSAPEEATKAVTEMNGRII--VT 333
Query: 93 KPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPG------IPMVVV 146
KP+ V +A + E ++ + ++ QY Q A R + G +PPG +P +
Sbjct: 334 KPLYVALAQRKEDRKAH-----LASQYM--QRLANMRMQQMGQMFPPGGAGNYFVPTIPQ 386
Query: 147 PDFSYG 152
P YG
Sbjct: 387 PQRFYG 392
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
D+TE L + FS G + IR +D T S G AY+ F + ++A +A++ MN + +
Sbjct: 21 DITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDMI--K 78
Query: 92 SKPIKVLIAAK 102
+PI+++ + +
Sbjct: 79 GRPIRIMWSQR 89
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGE 86
G+D+T+D L++ F +G I + V ++ G+S+G ++ F A +AV E+NG+
Sbjct: 171 GEDMTDDKLKEMFEKYGTITSHK-VMIKDDGKSRGFGFVAFEDPDAAEQAVLELNGK 226
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
K++ + FS FGNI + +D +G SKG ++ F A K+++++NG L
Sbjct: 108 KNIDNKAMYDTFSAFGNILSCKVAQDE-SGVSKGYGFVHFETEEAANKSIDKVNGMLL 164
>gi|226510663|gb|ACO59906.1| eukaryotic translation initiation factor 3 subunit G [Penaeus
monodon]
Length = 292
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
++ E DL+ F PFG+I I KD+NTG+SKG A+I F + +AAKA++ +NG
Sbjct: 219 ENTREQDLQDLFRPFGDISRIFLAKDKNTGQSKGFAFINFKRREDAAKAIQVLNG 273
>gi|355784531|gb|EHH65382.1| RNA-binding motif protein 39 [Macaca fascicularis]
Length = 530
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 260 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 318
Query: 92 SKPIKV 97
+P+KV
Sbjct: 319 -RPMKV 323
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 168 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYMEFVDVSSVPLAI 211
>gi|302503681|ref|XP_003013800.1| RNP domain protein [Arthroderma benhamiae CBS 112371]
gi|291177366|gb|EFE33160.1| RNP domain protein [Arthroderma benhamiae CBS 112371]
Length = 692
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 19 EPPHSRLFILCGK---DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
+P H RLF CG +VT+D L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 468 DPAHFRLF--CGNLAGEVTDDSLLKAFSKYPSVQKARVIRDKRTEKSKGYGFVSFSDGDD 525
Query: 76 AAKAVEEMNGEFLPNH 91
KA EM G+++ +H
Sbjct: 526 YFKAAREMQGKYIGSH 541
>gi|195352738|ref|XP_002042868.1| GM11591 [Drosophila sechellia]
gi|194126915|gb|EDW48958.1| GM11591 [Drosophila sechellia]
Length = 379
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++++ DL F+ FG I R + D +G SKGV +IRF + +EA +A++E+NG+
Sbjct: 162 KNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAIQELNGKTPKG 221
Query: 91 HSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYAR 129
+++PI V A + ++ Y +PQ+AA R
Sbjct: 222 YAEPITVKFANNPSNSAKAQIAPPLTA-YLTPQAAAATR 259
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ ++D T + KG ++ + EA A++ +NG L N
Sbjct: 306 ETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGN 364
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 17/96 (17%)
Query: 17 NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDR---------------NTGE 61
NDE + + I + +T++++R FS G ++ + V+D+ G+
Sbjct: 47 NDESRTNLIVIYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSVLPASLTALNPALQQGQ 106
Query: 62 SKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
S G ++ + + +A KAV +NG L N K IKV
Sbjct: 107 SLGYGFVNYVRAEDAEKAVNTLNGLRLQN--KVIKV 140
>gi|195133062|ref|XP_002010958.1| GI16282 [Drosophila mojavensis]
gi|193906933|gb|EDW05800.1| GI16282 [Drosophila mojavensis]
Length = 353
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++++ DL F+ FG I R + D +G SKGV +IRF + +EA +A++E+NG+
Sbjct: 136 KNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAIQELNGKTPKG 195
Query: 91 HSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYAR 129
+++PI V A + ++ Y +PQ+AA R
Sbjct: 196 YAEPITVKFANNPSNSAKAQIAPPLTA-YLTPQAAAATR 233
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
+ E+ L Q F PFG +Q ++ ++D T + KG ++ + EA A++ +NG L N
Sbjct: 280 ETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNR 339
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 17/96 (17%)
Query: 17 NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDR---------------NTGE 61
NDE + + + +T++++R FS G ++ + V+D+ G+
Sbjct: 21 NDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSVLPASLTALNPALQQGQ 80
Query: 62 SKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
S G ++ + + +A KAV +NG L N K IKV
Sbjct: 81 SLGYGFVNYVRAEDAEKAVNTLNGLRLQN--KVIKV 114
>gi|336464479|gb|EGO52719.1| hypothetical protein NEUTE1DRAFT_133314 [Neurospora tetrasperma
FGSC 2508]
Length = 453
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G + T++ L + FS + ++Q+ + V+D+ T +SKG ++ FS +
Sbjct: 292 DPSHLRLFVGNLAG-ETTDESLLKAFSRWKSVQKAKVVRDKRTTKSKGFGFVSFSDPEDF 350
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAAKLEFK 106
+A +EMNG+++ +H P+ V+ AK E K
Sbjct: 351 FQAAKEMNGKYIQSH--PV-VVHKAKTEIK 377
>gi|194384132|dbj|BAG64839.1| unnamed protein product [Homo sapiens]
Length = 521
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 251 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 309
Query: 92 SKPIKV 97
+P+KV
Sbjct: 310 -RPMKV 314
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 159 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 202
>gi|410900504|ref|XP_003963736.1| PREDICTED: nucleolysin TIAR-like isoform 1 [Takifugu rubripes]
Length = 386
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ D+T +D+R F+PFG+I + R +KD TG+SKG ++ F
Sbjct: 88 SCQKKDTSNHFHVFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFY 147
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ +M G++L
Sbjct: 148 NKLDAENAISKMAGQWL 164
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 21 PHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PH+ + CG +TE ++Q FSPFG I EIR D KG +++RFS AA
Sbjct: 203 PHN-CTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFPD------KGYSFVRFSSHDSAA 255
Query: 78 KAVEEMNGEFL 88
A+ +NG +
Sbjct: 256 HAIVSVNGTVI 266
>gi|327302044|ref|XP_003235714.1| RNP domain-containing protein [Trichophyton rubrum CBS 118892]
gi|326461056|gb|EGD86509.1| RNP domain-containing protein [Trichophyton rubrum CBS 118892]
Length = 415
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 19 EPPHSRLFILCGK---DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
+P H RLF CG +VT+D L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 271 DPAHFRLF--CGNLAGEVTDDSLLKAFSKYPSVQKARVIRDKRTEKSKGYGFVSFSDGDD 328
Query: 76 AAKAVEEMNGEFLPNH 91
KA EM G+++ +H
Sbjct: 329 YFKAAREMQGKYIGSH 344
>gi|295669832|ref|XP_002795464.1| TIA1 cytotoxic granule-associated RNA binding protein
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226285398|gb|EEH40964.1| TIA1 cytotoxic granule-associated RNA binding protein
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 501
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 2 DRN-YRINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDR 57
D+N R+N +S N E + I G +V ++ L Q FS FG++ E R + D
Sbjct: 134 DKNEIRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDM 193
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG S+G ++ F + S+A KA+ M+GE+L
Sbjct: 194 KTGRSRGYGFVAFRERSDAEKALSSMDGEWL 224
>gi|431907193|gb|ELK11259.1| Putative RNA-binding protein 23 [Pteropus alecto]
Length = 914
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
++TED LR F PFG I I +KD +TG SKG +I FS++ A +A+E++NG
Sbjct: 253 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSESECARRALEQLNG 306
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 161 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 204
>gi|336267134|ref|XP_003348333.1| hypothetical protein SMAC_02831 [Sordaria macrospora k-hell]
gi|380091985|emb|CCC10253.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 463
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G + T++ L + FS + ++Q+ + V+D+ T +SKG ++ FS +
Sbjct: 299 DPSHLRLFVGNLAG-ETTDESLLKAFSRWKSVQKAKVVRDKRTTKSKGFGFVSFSDPEDF 357
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAAKLEFK 106
+A +EMNG+++ +H P+ V+ AK E K
Sbjct: 358 FQAAKEMNGKYIQSH--PV-VVHKAKTEIK 384
>gi|402587503|gb|EJW81438.1| hypothetical protein WUBG_07656, partial [Wuchereria bancrofti]
Length = 337
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLP 89
K +++ DL F PFG I R + D TG SKGV ++RF + SEA A++++NG+
Sbjct: 179 AKTMSQLDLEALFKPFGQIITSRILSDNVTGISKGVGFVRFDRKSEAEDAIDKLNGKIPA 238
Query: 90 NHSKPIKVLIA 100
++PI V A
Sbjct: 239 GCTEPITVKFA 249
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T++++ FS G I + V+D+ TG+S G ++ + + +A KAV +NG L N
Sbjct: 94 QNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGFVNYVRQEDAYKAVTSLNGLRLQN 153
Query: 91 HSKPIKVLIA 100
K IKV A
Sbjct: 154 --KTIKVSFA 161
>gi|226290334|gb|EEH45818.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Paracoccidioides brasiliensis Pb18]
Length = 508
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 1 MDRNYRINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+ + R+N +S N E + I G +V ++ L Q FS FG++ E R + D
Sbjct: 164 LQQEIRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDM 223
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG S+G ++ F + S+A KA+ M+GE+L
Sbjct: 224 KTGRSRGYGFVAFRERSDAEKALSSMDGEWL 254
>gi|259155082|ref|NP_001158783.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
gi|223647384|gb|ACN10450.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
Length = 290
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 24 RLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI + E L + FS +G I E+ +KDR T +S+G A++ F ++A A E
Sbjct: 9 KLFIGGLDTETNEKALEKHFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 83 MNGEFLPNHSKPIKVLIAAKLEFK 106
MNG+ L KPIKV A K +F+
Sbjct: 69 MNGKSL--DGKPIKVEQATKPQFE 90
>gi|52545994|emb|CAH18281.2| hypothetical protein [Homo sapiens]
Length = 513
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 243 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 301
Query: 92 SKPIKV 97
+P+KV
Sbjct: 302 -RPMKV 306
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 151 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 194
>gi|17063213|gb|AAL32373.1| transcription coactivator CAPER [Mus musculus]
Length = 530
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 260 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 318
Query: 92 SKPIKV 97
+P+KV
Sbjct: 319 -RPMKV 323
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ S+G+AY+ F S A+
Sbjct: 168 DLEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLAI 211
>gi|35493811|ref|NP_909122.1| RNA-binding protein 39 isoform a [Homo sapiens]
gi|281182530|ref|NP_001162566.1| RNA-binding protein 39 [Papio anubis]
gi|284004921|ref|NP_001164806.1| RNA-binding protein 39 [Oryctolagus cuniculus]
gi|149733225|ref|XP_001501869.1| PREDICTED: RNA-binding protein 39 isoform 1 [Equus caballus]
gi|296199703|ref|XP_002747279.1| PREDICTED: RNA-binding protein 39 isoform 2 [Callithrix jacchus]
gi|332858224|ref|XP_003316931.1| PREDICTED: uncharacterized protein LOC458443 isoform 1 [Pan
troglodytes]
gi|335304742|ref|XP_003360012.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|344279919|ref|XP_003411733.1| PREDICTED: RNA-binding protein 39 isoform 1 [Loxodonta africana]
gi|345789986|ref|XP_864959.2| PREDICTED: RNA-binding protein 39 isoform 3 [Canis lupus
familiaris]
gi|354477982|ref|XP_003501196.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Cricetulus
griseus]
gi|397523808|ref|XP_003831910.1| PREDICTED: RNA-binding protein 39 [Pan paniscus]
gi|426391507|ref|XP_004062114.1| PREDICTED: RNA-binding protein 39 isoform 1 [Gorilla gorilla
gorilla]
gi|28201880|sp|Q14498.2|RBM39_HUMAN RecName: Full=RNA-binding protein 39; AltName: Full=Hepatocellular
carcinoma protein 1; AltName: Full=RNA-binding motif
protein 39; AltName: Full=RNA-binding region-containing
protein 2; AltName: Full=Splicing factor HCC1
gi|405194|gb|AAA16347.1| splicing factor [Homo sapiens]
gi|119596565|gb|EAW76159.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|119596567|gb|EAW76161.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|146327034|gb|AAI41836.1| RNA binding motif protein 39 [Homo sapiens]
gi|164623752|gb|ABY64678.1| RNA binding motif protein 39, isoform 1 (predicted) [Papio anubis]
gi|165971473|gb|AAI58173.1| RNA binding motif protein 39 [Homo sapiens]
gi|166831598|gb|ABY90123.1| RNA binding motif protein 39 isoform a (predicted) [Callithrix
jacchus]
gi|169731519|gb|ACA64891.1| RNA binding motif protein 39 isoform a (predicted) [Callicebus
moloch]
gi|197215647|gb|ACH53039.1| RNA binding motif protein 39 isoform a (predicted) [Otolemur
garnettii]
gi|217038339|gb|ACJ76632.1| RNA binding motif protein 39 isoform a (predicted) [Oryctolagus
cuniculus]
gi|229368730|gb|ACQ63013.1| RNA binding motif protein 39 isoform a (predicted) [Dasypus
novemcinctus]
gi|351702535|gb|EHB05454.1| RNA-binding protein 39 [Heterocephalus glaber]
gi|380783277|gb|AFE63514.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|383408125|gb|AFH27276.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|384939254|gb|AFI33232.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|410218746|gb|JAA06592.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255434|gb|JAA15684.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292900|gb|JAA25050.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292904|gb|JAA25052.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350859|gb|JAA42033.1| RNA binding motif protein 39 [Pan troglodytes]
gi|440902514|gb|ELR53299.1| RNA-binding protein 39 [Bos grunniens mutus]
Length = 530
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 260 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 318
Query: 92 SKPIKV 97
+P+KV
Sbjct: 319 -RPMKV 323
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 168 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 211
>gi|417411216|gb|JAA52053.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 499
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 229 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 287
Query: 92 SKPIKV 97
+P+KV
Sbjct: 288 -RPMKV 292
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 137 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 180
>gi|410953912|ref|XP_003983612.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39 [Felis
catus]
Length = 523
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 259 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 317
Query: 92 SKPIKV 97
+P+KV
Sbjct: 318 -RPMKV 322
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 168 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 211
>gi|365812510|ref|NP_001002172.2| ELAV-like protein 2 [Danio rerio]
Length = 389
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS FG I R + D+ TG S+GV +IRF + EA +A++ +NG+ P
Sbjct: 163 KTMTQKELEQLFSQFGRIITSRILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNGQKPPG 222
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 223 ATEPITVKFA 232
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E+ L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 316 DADENVLWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAVAIASLNG 369
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + + +A KA+ +NG L
Sbjct: 77 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYMEPKDAEKAINTLNGLRL-- 134
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 135 QTKTIKV 141
>gi|195503598|ref|XP_002098718.1| GE23777 [Drosophila yakuba]
gi|194184819|gb|EDW98430.1| GE23777 [Drosophila yakuba]
Length = 543
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++ LR+ F+PFG I + R V+D T +SKG ++ F K SEA A+ MNG++L +
Sbjct: 221 EIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAMNGQWLGSR 280
Query: 92 S 92
S
Sbjct: 281 S 281
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 13/87 (14%)
Query: 16 YNDEPPHSRLFILCGKD-----VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRF 70
YN P + + G + ++E+ L++ F+P+G IQEIR KD KG A++RF
Sbjct: 307 YNQSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKD------KGYAFVRF 360
Query: 71 SKTSEAAKAVEEMNGEFLPNHSKPIKV 97
S A A+ ++ + +++P+K
Sbjct: 361 STKEAATHAIVGVHNTEI--NAQPVKC 385
>gi|170071297|ref|XP_001869868.1| splicing factor [Culex quinquefasciatus]
gi|167867202|gb|EDS30585.1| splicing factor [Culex quinquefasciatus]
Length = 524
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I+ + D +TG SKG +I F +A KA+E++NG L
Sbjct: 277 NITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKALEQLNGFELA-- 334
Query: 92 SKPIKV 97
+P+KV
Sbjct: 335 GRPMKV 340
>gi|417411155|gb|JAA52027.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 491
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 227 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 285
Query: 92 SKPIKV 97
+P+KV
Sbjct: 286 -RPMKV 290
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 135 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 178
>gi|360043584|emb|CCD81130.1| elav (embryonic lethal, abnormal vision,drosophila)-like protein
[Schistosoma mansoni]
Length = 682
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 28 LCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
+CG K +TE DL + F P G I R + D NTG+SKGV +IRF + EA A+++ NG
Sbjct: 80 ICGLPKLMTESDLEKLFHPCGKIITSRILFDSNTGQSKGVGFIRFDQRHEAELAIQQFNG 139
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
++++++R FS G + + ++D+ TG+S G ++ + S+A +A+ +N L N
Sbjct: 1 MSQEEMRILFSKIGKLASCKLIRDKLTGQSLGYGFVNYVDASDAERAIRALNKMRLQN-- 58
Query: 93 KPIKVLIA 100
K IKV +A
Sbjct: 59 KTIKVSLA 66
>gi|148674239|gb|EDL06186.1| RNA binding motif protein 39, isoform CRA_d [Mus musculus]
Length = 507
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 243 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 301
Query: 92 SKPIKV 97
+P+KV
Sbjct: 302 -RPMKV 306
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 151 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 194
>gi|426241402|ref|XP_004014580.1| PREDICTED: RNA-binding protein 39 isoform 1 [Ovis aries]
Length = 530
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 260 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELTG- 318
Query: 92 SKPIKV 97
+P+KV
Sbjct: 319 -RPMKV 323
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 168 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 211
>gi|358367405|dbj|GAA84024.1| RNP domain protein [Aspergillus kawachii IFO 4308]
Length = 381
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G +VT+D L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 251 DPAHFRLFVGNLAG-EVTDDSLLKAFSKYTSVQKARVIRDKRTQKSKGYGFVSFSDGDDY 309
Query: 77 AKAVEEMNGEFLPNH 91
KA EM G+++ +H
Sbjct: 310 FKAAREMQGKYIGSH 324
>gi|148666753|gb|EDK99169.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_c
[Mus musculus]
Length = 293
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N S + D H +F+ ++T +D++ F+PFG I + R VKD
Sbjct: 80 MGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMA 139
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A+++M G++L
Sbjct: 140 TGKSKGYGFVSFFNKWDAENAIQQMGGQWL 169
>gi|336176064|ref|NP_001229528.1| RNA-binding protein 39 isoform c [Homo sapiens]
gi|296199707|ref|XP_002747281.1| PREDICTED: RNA-binding protein 39 isoform 4 [Callithrix jacchus]
gi|332858228|ref|XP_003316932.1| PREDICTED: uncharacterized protein LOC458443 isoform 2 [Pan
troglodytes]
gi|335304745|ref|XP_003360013.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719242|ref|XP_003363966.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|345789990|ref|XP_003433300.1| PREDICTED: RNA-binding protein 39 [Canis lupus familiaris]
gi|426391511|ref|XP_004062116.1| PREDICTED: RNA-binding protein 39 isoform 3 [Gorilla gorilla
gorilla]
gi|124297482|gb|AAI31544.1| RBM39 protein [Homo sapiens]
gi|194389138|dbj|BAG61586.1| unnamed protein product [Homo sapiens]
Length = 508
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 238 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 296
Query: 92 SKPIKV 97
+P+KV
Sbjct: 297 -RPMKV 301
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 146 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 189
>gi|118403314|ref|NP_573505.2| RNA-binding protein 39 [Mus musculus]
gi|392346872|ref|XP_003749653.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Rattus
norvegicus]
gi|341941811|sp|Q8VH51.2|RBM39_MOUSE RecName: Full=RNA-binding protein 39; AltName: Full=Coactivator of
activating protein 1 and estrogen receptors;
Short=Coactivator of AP-1 and ERs; AltName:
Full=RNA-binding motif protein 39; AltName:
Full=RNA-binding region-containing protein 2; AltName:
Full=Transcription coactivator CAPER
gi|55991480|gb|AAH86645.1| RNA binding motif protein 39 [Mus musculus]
gi|74151058|dbj|BAE27657.1| unnamed protein product [Mus musculus]
gi|148674237|gb|EDL06184.1| RNA binding motif protein 39, isoform CRA_b [Mus musculus]
Length = 530
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 260 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 318
Query: 92 SKPIKV 97
+P+KV
Sbjct: 319 -RPMKV 323
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 168 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 211
>gi|431894348|gb|ELK04148.1| RNA-binding protein 39 [Pteropus alecto]
Length = 601
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 337 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELA-- 394
Query: 92 SKPIKV 97
+P+KV
Sbjct: 395 GRPMKV 400
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 245 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 288
>gi|350629665|gb|EHA18038.1| hypothetical protein ASPNIDRAFT_176547 [Aspergillus niger ATCC
1015]
Length = 496
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 164 RVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRS 223
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + S+A KA+ M+GE+L
Sbjct: 224 RGYGFVAFRERSDADKALSSMDGEWL 249
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY--IRFSKTSEA 76
P+ R + G D VTED L+Q F G++ ++ + D+N SKG Y + F A
Sbjct: 88 PNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNF-NSKGYNYGFVEFDDPGAA 146
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A++ +NG + H I+V A
Sbjct: 147 ERAMQTLNGRRI--HQSEIRVNWA 168
>gi|312371659|gb|EFR19788.1| hypothetical protein AND_21810 [Anopheles darlingi]
Length = 440
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 18 DEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ ++ + LR+ F+PFG I R V+D T +S+G A++ F K +EA
Sbjct: 91 DTSQHYHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSRGYAFVSFVKKAEA 150
Query: 77 AKAVEEMNGEFL 88
A++ MNG++L
Sbjct: 151 ENAIQMMNGQWL 162
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 13/86 (15%)
Query: 16 YNDEPPHSRLFILCG----KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
YN+ P + + CG +T++ +++ F+ FG I + R KD KG A+IRF+
Sbjct: 198 YNNTSP-TNTTVYCGGFPPNTITDELIQKHFAQFGQIHDTRVFKD------KGYAFIRFA 250
Query: 72 KTSEAAKAVEEMNGEFLPNHSKPIKV 97
AA+A+E + + H P+K
Sbjct: 251 NKESAARAIEGTHNSEVQGH--PVKC 274
>gi|336176066|ref|NP_001229529.1| RNA-binding protein 39 isoform d [Homo sapiens]
gi|73991836|ref|XP_865202.1| PREDICTED: RNA-binding protein 39 isoform 16 [Canis lupus
familiaris]
gi|296199705|ref|XP_002747280.1| PREDICTED: RNA-binding protein 39 isoform 3 [Callithrix jacchus]
gi|332858230|ref|XP_003316933.1| PREDICTED: uncharacterized protein LOC458443 isoform 3 [Pan
troglodytes]
gi|335304749|ref|XP_003360015.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719245|ref|XP_003363967.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|426391513|ref|XP_004062117.1| PREDICTED: RNA-binding protein 39 isoform 4 [Gorilla gorilla
gorilla]
Length = 502
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 238 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 296
Query: 92 SKPIKV 97
+P+KV
Sbjct: 297 -RPMKV 301
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 146 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 189
>gi|194386804|dbj|BAG61212.1| unnamed protein product [Homo sapiens]
Length = 502
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 238 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 296
Query: 92 SKPIKV 97
+P+KV
Sbjct: 297 -RPMKV 301
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 146 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 189
>gi|4757926|ref|NP_004893.1| RNA-binding protein 39 isoform b [Homo sapiens]
gi|197097940|ref|NP_001125339.1| RNA-binding protein 39 [Pongo abelii]
gi|149733223|ref|XP_001501876.1| PREDICTED: RNA-binding protein 39 isoform 2 [Equus caballus]
gi|194044529|ref|XP_001925282.1| PREDICTED: RNA-binding protein 39 isoform 2 [Sus scrofa]
gi|296199701|ref|XP_002747278.1| PREDICTED: RNA-binding protein 39 isoform 1 [Callithrix jacchus]
gi|301762104|ref|XP_002916459.1| PREDICTED: RNA-binding protein 39-like [Ailuropoda melanoleuca]
gi|332858226|ref|XP_514808.3| PREDICTED: uncharacterized protein LOC458443 isoform 5 [Pan
troglodytes]
gi|344279921|ref|XP_003411734.1| PREDICTED: RNA-binding protein 39 isoform 2 [Loxodonta africana]
gi|345789988|ref|XP_865124.2| PREDICTED: RNA-binding protein 39 isoform 12 [Canis lupus
familiaris]
gi|354477984|ref|XP_003501197.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Cricetulus
griseus]
gi|426391509|ref|XP_004062115.1| PREDICTED: RNA-binding protein 39 isoform 2 [Gorilla gorilla
gorilla]
gi|75070825|sp|Q5RC80.1|RBM39_PONAB RecName: Full=RNA-binding protein 39; AltName: Full=RNA-binding
motif protein 39
gi|405192|gb|AAA16346.1| splicing factor [Homo sapiens]
gi|55727753|emb|CAH90627.1| hypothetical protein [Pongo abelii]
gi|119596568|gb|EAW76162.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|119596569|gb|EAW76163.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|296480931|tpg|DAA23046.1| TPA: RNA binding motif protein 39 [Bos taurus]
gi|307686241|dbj|BAJ21051.1| RNA binding motif protein 39 [synthetic construct]
gi|344246681|gb|EGW02785.1| RNA-binding protein 39 [Cricetulus griseus]
gi|380783275|gb|AFE63513.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|383408127|gb|AFH27277.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|384939256|gb|AFI33233.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|410218748|gb|JAA06593.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255438|gb|JAA15686.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292902|gb|JAA25051.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350855|gb|JAA42031.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350863|gb|JAA42035.1| RNA binding motif protein 39 [Pan troglodytes]
Length = 524
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 260 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 318
Query: 92 SKPIKV 97
+P+KV
Sbjct: 319 -RPMKV 323
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 168 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 211
>gi|432101442|gb|ELK29624.1| RNA-binding protein 39 [Myotis davidii]
Length = 491
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 238 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 296
Query: 92 SKPIKV 97
+P+KV
Sbjct: 297 -RPMKV 301
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 146 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 189
>gi|426241408|ref|XP_004014583.1| PREDICTED: RNA-binding protein 39 isoform 4 [Ovis aries]
Length = 508
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 238 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELTG- 296
Query: 92 SKPIKV 97
+P+KV
Sbjct: 297 -RPMKV 301
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 146 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 189
>gi|410900508|ref|XP_003963738.1| PREDICTED: nucleolysin TIAR-like isoform 3 [Takifugu rubripes]
Length = 395
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ D+T +D+R F+PFG+I + R +KD TG+SKG ++ F
Sbjct: 86 SCQKKDTSNHFHVFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFY 145
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ +M G++L
Sbjct: 146 NKLDAENAISKMAGQWL 162
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 21 PHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PH+ + CG +TE ++Q FSPFG I EIR D KG +++RFS AA
Sbjct: 201 PHN-CTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFPD------KGYSFVRFSSHDSAA 253
Query: 78 KAVEEMNGEFL 88
A+ +NG +
Sbjct: 254 HAIVSVNGTVI 264
>gi|212546539|ref|XP_002153423.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
gi|210064943|gb|EEA19038.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
Length = 135
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
T+D LR GF FG I+E +KDR+T S+G ++RFS +EA A+E MN +
Sbjct: 13 TTDDTLRSGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFSTDAEADAAIEGMNNQDFD--G 70
Query: 93 KPIKVLIAAKLEFKEGYRGG 112
+ I+V A+ G GG
Sbjct: 71 RVIRVDRASNNASSRGNEGG 90
>gi|170058744|ref|XP_001865056.1| splicing factor [Culex quinquefasciatus]
gi|167877732|gb|EDS41115.1| splicing factor [Culex quinquefasciatus]
Length = 546
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I+ + D +TG SKG +I F +A KA+E++NG L
Sbjct: 299 NITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKALEQLNGFELA-- 356
Query: 92 SKPIKV 97
+P+KV
Sbjct: 357 GRPMKV 362
>gi|115452257|ref|NP_001049729.1| Os03g0278800 [Oryza sativa Japonica Group]
gi|108707493|gb|ABF95288.1| RNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113548200|dbj|BAF11643.1| Os03g0278800 [Oryza sativa Japonica Group]
gi|125543333|gb|EAY89472.1| hypothetical protein OsI_11004 [Oryza sativa Indica Group]
gi|125585797|gb|EAZ26461.1| hypothetical protein OsJ_10350 [Oryza sativa Japonica Group]
Length = 173
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 15 EYNDEPPHS--RLFILCGKDVTEDD-LRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
E ++ PP + +LFI +T D+ L+ F+PFG + E + + DR +G SKG ++R++
Sbjct: 57 EVSNVPPLTAPKLFISGLSRLTTDEKLKNAFAPFGQLLEAKVITDRISGRSKGFGFVRYA 116
Query: 72 KTSEAAKAVEEMNGEFL 88
EA A +EMN +FL
Sbjct: 117 TLEEAENARQEMNAKFL 133
>gi|255760011|ref|NP_001157551.1| nucleolysin TIA-1 isoform 3 [Mus musculus]
gi|23271442|gb|AAH23813.1| Tia1 protein [Mus musculus]
Length = 285
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N S + D H +F+ ++T +D++ F+PFG I + R VKD
Sbjct: 72 MGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMA 131
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A+++M G++L
Sbjct: 132 TGKSKGYGFVSFFNKWDAENAIQQMGGQWL 161
>gi|61557287|ref|NP_001013225.1| RNA-binding protein 39 [Rattus norvegicus]
gi|392346874|ref|XP_003749654.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Rattus
norvegicus]
gi|60552170|gb|AAH91394.1| RNA binding motif protein 39 [Rattus norvegicus]
gi|74196119|dbj|BAE32977.1| unnamed protein product [Mus musculus]
gi|149030834|gb|EDL85861.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Rattus
norvegicus]
Length = 524
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 260 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 318
Query: 92 SKPIKV 97
+P+KV
Sbjct: 319 -RPMKV 323
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 168 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 211
>gi|317030432|ref|XP_001392545.2| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus niger CBS 513.88]
Length = 478
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 165 RVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRS 224
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + S+A KA+ M+GE+L
Sbjct: 225 RGYGFVAFRERSDADKALSSMDGEWL 250
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY--IRFSKTSEA 76
P+ R + G D VTED L+Q F G++ ++ + D+N SKG Y + F A
Sbjct: 88 PNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAA 147
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A++ +NG + H I+V A
Sbjct: 148 ERAMQTLNGRRI--HQSEIRVNWA 169
>gi|189233691|ref|XP_969160.2| PREDICTED: similar to AGAP005292-PA [Tribolium castaneum]
Length = 358
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 7 INTHDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGV 65
+N + + N++ H +F+ ++ LR+ F+ FG I + R V+D T +SKG
Sbjct: 35 VNQNSNTPSSNNKAEHHHIFVGDLSPEIETQTLREAFAAFGEISDCRVVRDPQTLKSKGY 94
Query: 66 AYIRFSKTSEAAKAVEEMNGEFL 88
++ F K +EA A+ MNG++L
Sbjct: 95 GFVSFIKKAEAESAINAMNGQWL 117
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 9/57 (15%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
+ CG + ED L++ F P+G IQEIR K+ KG A+IRFS A A+
Sbjct: 159 VYCGGITNGLCEDLLQKTFLPYGIIQEIRVFKE------KGYAFIRFSTKESATHAI 209
>gi|426241406|ref|XP_004014582.1| PREDICTED: RNA-binding protein 39 isoform 3 [Ovis aries]
Length = 502
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 238 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELTG- 296
Query: 92 SKPIKV 97
+P+KV
Sbjct: 297 -RPMKV 301
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 146 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 189
>gi|330688445|ref|NP_001193433.1| RNA-binding protein 39 [Bos taurus]
Length = 530
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 266 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 324
Query: 92 SKPIKV 97
+P+KV
Sbjct: 325 -RPMKV 329
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 174 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 217
>gi|326936530|ref|XP_003214306.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Meleagris gallopavo]
Length = 423
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 156 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 212
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 5 YRINTHDRSRE--YNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNT 59
Y NT S + N P S + CG +TE +RQ FSPFG I EIR D
Sbjct: 233 YESNTKQLSYDDVVNQSSP-SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD--- 288
Query: 60 GESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 289 ---KGYSFVRFNSHESAAHAIVSVNGTTIEGH 317
>gi|134077058|emb|CAK39931.1| unnamed protein product [Aspergillus niger]
Length = 497
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 165 RVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRS 224
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + S+A KA+ M+GE+L
Sbjct: 225 RGYGFVAFRERSDADKALSSMDGEWL 250
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY--IRFSKTSEA 76
P+ R + G D VTED L+Q F G++ ++ + D+N SKG Y + F A
Sbjct: 88 PNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAA 147
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A++ +NG + H I+V A
Sbjct: 148 ERAMQTLNGRRI--HQSEIRVNWA 169
>gi|426241410|ref|XP_004014584.1| PREDICTED: RNA-binding protein 39 isoform 5 [Ovis aries]
Length = 530
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 266 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELTG- 324
Query: 92 SKPIKV 97
+P+KV
Sbjct: 325 -RPMKV 329
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 174 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 217
>gi|426241404|ref|XP_004014581.1| PREDICTED: RNA-binding protein 39 isoform 2 [Ovis aries]
Length = 524
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 260 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELTG- 318
Query: 92 SKPIKV 97
+P+KV
Sbjct: 319 -RPMKV 323
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 168 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 211
>gi|85115934|ref|XP_964958.1| hypothetical protein NCU03099 [Neurospora crassa OR74A]
gi|28926757|gb|EAA35722.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 453
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G + T++ L + FS + ++Q+ + V+D+ T +SKG ++ FS +
Sbjct: 292 DPSHLRLFVGNLAG-ETTDESLLKAFSRWKSVQKAKVVRDKRTTKSKGFGFVSFSDPEDF 350
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAAKLEFK 106
+A +EMNG+++ +H P+ V+ AK E K
Sbjct: 351 FQAAKEMNGKYIQSH--PV-VVHKAKTEIK 377
>gi|88682991|gb|AAI05542.1| RBM39 protein [Bos taurus]
Length = 528
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 264 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 322
Query: 92 SKPIKV 97
+P+KV
Sbjct: 323 -RPMKV 327
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 172 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 215
>gi|383862667|ref|XP_003706805.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Megachile rotundata]
Length = 630
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 17/126 (13%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+ ++ LR+ F+PFG I + + + G SKG ++ FS EA KAV EMNG + +
Sbjct: 307 INDERLRREFAPFGTITSAKVMME--DGRSKGFGFVCFSAPEEATKAVTEMNGRII--VT 362
Query: 93 KPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPG------IPMVVV 146
KP+ V +A + E ++ + ++ QY Q A R + G +PPG +P +
Sbjct: 363 KPLYVALAQRKEDRKAH-----LASQYM--QRLANMRMQQMGQMFPPGGAGNYFVPTIPQ 415
Query: 147 PDFSYG 152
P YG
Sbjct: 416 PQRFYG 421
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
D+TE L + FS G + IR +D T S G AY+ F + ++A +A++ MN + +
Sbjct: 21 DITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDMI--K 78
Query: 92 SKPIKVLIAAK 102
+PI+++ + +
Sbjct: 79 GRPIRIMWSQR 89
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGE 86
G+D+T+D L++ F +G I + V ++ G+S+G ++ F A +AV E+NG+
Sbjct: 200 GEDMTDDKLKEMFEKYGTITSHK-VMIKDDGKSRGFGFVAFEDPDAAEQAVLELNGK 255
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
K++ + FS FGNI + +D +G SKG ++ F A K+++++NG L
Sbjct: 108 KNIDNKAMYDTFSAFGNILSCKVAQDE-SGVSKGYGFVHFETEEAANKSIDKVNGMLL 164
>gi|358371808|dbj|GAA88414.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus kawachii IFO 4308]
Length = 478
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 165 RVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRS 224
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + S+A KA+ M+GE+L
Sbjct: 225 RGYGFVAFRERSDADKALSSMDGEWL 250
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY--IRFSKTSEA 76
P+ R + G D VTED L+Q F G++ ++ + D+N SKG Y + F A
Sbjct: 88 PNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAA 147
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A++ +NG + H I+V A
Sbjct: 148 ERAMQTLNGRRI--HQSEIRVNWA 169
>gi|168039508|ref|XP_001772239.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676409|gb|EDQ62892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 507
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 20 PPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PPH + G +D TE+DLR S G++ E+R +KD++TG++KG A++ F A
Sbjct: 121 PPHGSEIFVGGITRDTTEEDLRTLCSSCGDVYEVRLLKDKDTGQNKGYAFVTFLNEECAE 180
Query: 78 KAVEEMN 84
KA+E +N
Sbjct: 181 KAIETLN 187
>gi|449468518|ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
gi|449496932|ref|XP_004160266.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 174
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 21 PHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
P + LF+ K T + L + F+ FG + R V DR TG SKG +++++ +AAK
Sbjct: 77 PSTNLFVSGLSKRTTTEKLHEAFAKFGEVAHARVVTDRVTGYSKGFGFVKYATLEDAAKG 136
Query: 80 VEEMNGEFL 88
+E M+G+FL
Sbjct: 137 IEGMDGKFL 145
>gi|74179655|dbj|BAE22477.1| unnamed protein product [Mus musculus]
Length = 521
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 257 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 315
Query: 92 SKPIKV 97
+P+KV
Sbjct: 316 -RPMKV 320
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 165 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 208
>gi|332029721|gb|EGI69600.1| Nucleolysin TIAR [Acromyrmex echinatior]
Length = 393
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+D+ ++N T ++ D H +F+ ++ L++ F+PFG I R V+D
Sbjct: 72 LDKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDP 131
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
T +SKG A++ F K SEA A+ MNG++L
Sbjct: 132 QTLKSKGYAFVSFVKKSEAEAAINAMNGQWL 162
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 34/140 (24%)
Query: 16 YNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
YN P + + CG +T++ +++ FSPFG IQ+IR KD KG A+I+F+
Sbjct: 198 YNQSSP-TNCTVYCGGFTNGITDELIKKTFSPFGTIQDIRVFKD------KGYAFIKFTT 250
Query: 73 TSEAAKAVE-----EMNGEFL---------------PNHSKPIKVLIAAKLEFKEGYRGG 112
A A+E E+NG + PN + + + A ++ GY G
Sbjct: 251 KEAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQQVTAGAGQYAYGY--G 308
Query: 113 QKISVQYTSPQSAAYARDKF 132
Q++S Y PQ + +F
Sbjct: 309 QQMSYWY--PQGYPQMQGQF 326
>gi|115398882|ref|XP_001215030.1| hypothetical protein ATEG_05852 [Aspergillus terreus NIH2624]
gi|114191913|gb|EAU33613.1| hypothetical protein ATEG_05852 [Aspergillus terreus NIH2624]
Length = 348
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G +VT+D L + F+ + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 218 DPAHFRLFVGNLAG-EVTDDSLFKAFAKYSSVQKARVIRDKRTQKSKGYGFVSFSDGDDY 276
Query: 77 AKAVEEMNGEFLPNH 91
KA EM G+++ +H
Sbjct: 277 FKAAREMQGKYIGSH 291
>gi|410900506|ref|XP_003963737.1| PREDICTED: nucleolysin TIAR-like isoform 2 [Takifugu rubripes]
Length = 408
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ D+T +D+R F+PFG+I + R +KD TG+SKG ++ F
Sbjct: 110 SCQKKDTSNHFHVFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFY 169
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ +M G++L
Sbjct: 170 NKLDAENAISKMAGQWL 186
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 21 PHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PH+ + CG +TE ++Q FSPFG I EIR D KG +++RFS AA
Sbjct: 225 PHN-CTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFPD------KGYSFVRFSSHDSAA 277
Query: 78 KAVEEMNGEFL 88
A+ +NG +
Sbjct: 278 HAIVSVNGTVI 288
>gi|350296569|gb|EGZ77546.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 455
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G + T++ L + FS + ++Q+ + V+D+ T +SKG ++ FS +
Sbjct: 294 DPSHLRLFVGNLAG-ETTDESLLKAFSRWKSVQKAKVVRDKRTTKSKGFGFVSFSDPEDF 352
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAAKLEFK 106
+A +EMNG+++ +H P+ V+ AK E K
Sbjct: 353 FQAAKEMNGKYIQSH--PV-VVHKAKTEIK 379
>gi|327271618|ref|XP_003220584.1| PREDICTED: RNA-binding protein 39-like [Anolis carolinensis]
Length = 578
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 316 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL--A 373
Query: 92 SKPIKV 97
+P+KV
Sbjct: 374 GRPMKV 379
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 224 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 267
>gi|156360993|ref|XP_001625306.1| predicted protein [Nematostella vectensis]
gi|156212133|gb|EDO33206.1| predicted protein [Nematostella vectensis]
Length = 584
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 25 LFILCGKDVTEDD-LRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
L+I D +D+ LR+ FSP+G I + +KD + G SKG ++ FS EA KAV EM
Sbjct: 299 LYIKNLDDPIDDERLREEFSPYGTISSAKVMKD-DKGNSKGFGFVCFSSPEEATKAVTEM 357
Query: 84 NGEFLPNHSKPIKVLIAAKLEFKEGYRGGQKI 115
NG L SKP+ V +A + E ++ Q +
Sbjct: 358 NGRIL--ISKPLYVALAQRREERKAQLAAQHM 387
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DVTE L + FS G++ IR +D T S G AY+ F + A KA++ MN F P
Sbjct: 23 DVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHAEKALDTMN--FDPIK 80
Query: 92 SKPIKVL 98
+P +++
Sbjct: 81 GRPCRIM 87
>gi|395745189|ref|XP_002824146.2| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Pongo
abelii]
Length = 636
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
D+ ++ LR+ FSPFG I + + + G SKG ++ FS EA KAV EMNG +
Sbjct: 304 DIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIV--A 359
Query: 92 SKPIKVLIAAKLEFKEGY 109
+KP+ V +A + E ++ Y
Sbjct: 360 TKPLYVALAQRKEERQAY 377
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
G+D+ ++ L+ F FG ++ + D +G+SKG ++ F K +A KAV+EMNG+ L
Sbjct: 199 GEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFEKHEDAQKAVDEMNGKEL 256
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DVTE L + FSP G I IR +D T S AY+ F +A A++ MN + +
Sbjct: 21 DVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAEHALDTMNFDVI--K 78
Query: 92 SKPIKVL 98
KP++++
Sbjct: 79 GKPVRIM 85
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
K + L S FGNI + V D N SKG ++ F A +A+E+MNG L
Sbjct: 108 KSINNKALYDTVSAFGNILSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLL 163
>gi|347967649|ref|XP_312633.5| AGAP002335-PA [Anopheles gambiae str. PEST]
gi|333468363|gb|EAA07505.5| AGAP002335-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+ + R+N T ++ D H +F+ ++ + LR+ F+PFG I R V+D
Sbjct: 72 LKKEIRVNWATSAGNQPKTDTSQHHHIFVGDLSPEIDTETLREAFAPFGEISNCRIVRDP 131
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
T +S+G A++ F K +EA A+ MNG++L
Sbjct: 132 QTLKSRGYAFVSFVKKAEAENAIAMMNGQWL 162
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 13/86 (15%)
Query: 16 YNDEPPHSRLFILCG----KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
YN+ P + + CG +T++ +++ F+ FG+I + R KD KG A+IRF+
Sbjct: 198 YNNTSP-TNTTVYCGGFPPNAITDELIQKHFAQFGHINDTRVFKD------KGYAFIRFA 250
Query: 72 KTSEAAKAVEEMNGEFLPNHSKPIKV 97
AA+A+E + + H P+K
Sbjct: 251 SKESAARAIEGTHNSEVQGH--PVKC 274
>gi|195110887|ref|XP_002000011.1| GI22766 [Drosophila mojavensis]
gi|193916605|gb|EDW15472.1| GI22766 [Drosophila mojavensis]
Length = 387
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++ LR+ F+PFG I + R V+D T +SKG ++ F K SEA A+ MNG++L +
Sbjct: 55 EIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAMNGQWLGSR 114
Query: 92 S 92
S
Sbjct: 115 S 115
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 13/87 (14%)
Query: 16 YNDEPPHSRLFILCGKD-----VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRF 70
YN P + + G + ++E+ L++ F+P+G IQEIR KD KG A++RF
Sbjct: 141 YNQSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKD------KGYAFVRF 194
Query: 71 SKTSEAAKAVEEMNGEFLPNHSKPIKV 97
S A A+ ++ + +++P+K
Sbjct: 195 STKEAATHAIVGVHNTEI--NAQPVKC 219
>gi|49119672|gb|AAH72716.1| Zgc:91918 [Danio rerio]
Length = 360
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS FG I R + D+ TG S+GV +IRF + EA +A++ +NG+ P
Sbjct: 134 KTMTQKELEQLFSQFGRIITSRILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNGQKPPG 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E+ L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 287 DADENVLWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAVAIASLNG 340
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYMEPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|440912647|gb|ELR62200.1| Heterogeneous nuclear ribonucleoprotein G, partial [Bos grunniens
mutus]
Length = 206
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
+ E L F +G I E+ +KDR T +S+G A+I F ++A AV +MNG+ L
Sbjct: 18 ETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRDMNGKSL--D 75
Query: 92 SKPIKVLIAAKLEFKEGYRG 111
K IKV A K F+ G RG
Sbjct: 76 GKAIKVAQATKPAFESGRRG 95
>gi|344250807|gb|EGW06911.1| Nucleolysin TIA-1 [Cricetulus griseus]
Length = 387
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 116 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 172
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y +NT S E + S + CG +TE +RQ FSPFG I EIR D
Sbjct: 193 YELNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQILEIRVFPD---- 248
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG ++IRF+ AA A+ +NG + H
Sbjct: 249 --KGYSFIRFNSHESAAHAIVSVNGTTIEGH 277
>gi|395514482|ref|XP_003761446.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Sarcophilus
harrisii]
Length = 389
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P+
Sbjct: 163 KTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPS 222
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 223 ATEPITVKFA 232
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 316 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 369
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 77 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 134
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 135 QTKTIKV 141
>gi|189237575|ref|XP_974855.2| PREDICTED: similar to splicing factor [Tribolium castaneum]
Length = 501
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I+ + D TG SKG +I F +A KA+E++NG L
Sbjct: 251 NITEDMLRSIFEPFGKIDNIQLIMDPETGRSKGYGFIAFRNCEDAKKALEQLNGFEL--A 308
Query: 92 SKPIKV 97
+P+KV
Sbjct: 309 GRPMKV 314
>gi|156061483|ref|XP_001596664.1| glycine-rich RNA-binding protein [Sclerotinia sclerotiorum 1980]
gi|154700288|gb|EDO00027.1| glycine-rich RNA-binding protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 193
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 23 SRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTS------E 75
S+LFI ED LR+ FS FGN++E VKDR+TG S+G ++RF + S +
Sbjct: 2 SKLFIGGLAWHTDEDALRKKFSEFGNVEEAVVVKDRDTGRSRGFGFVRFGQGSDSSPEAD 61
Query: 76 AAKAVEEMN 84
A KA++EMN
Sbjct: 62 AEKAIQEMN 70
>gi|405963075|gb|EKC28679.1| ELAV-like protein 2 [Crassostrea gigas]
Length = 502
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 6/98 (6%)
Query: 35 EDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKP 94
E++L F FG I ++R ++D++T ESKGV ++ ++K SEAA A+E MNG+ L P
Sbjct: 290 EEELGAHFRQFGEIIQVRLLRDKSTNESKGVGFVYYTKRSEAAAALEAMNGKTLLK-GYP 348
Query: 95 IKVLIAAKLEFKEGYRGGQKISVQ----YTSPQSAAYA 128
+ A + ++G R +I VQ Y +P S Y
Sbjct: 349 ALSIKFADINARKG-RAPYQIQVQTNLRYPTPGSNPYG 385
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 10 HDRSREYNDEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYI 68
H + N P++ L + + ++++D ++ F G ++ + V+D+ T S G ++
Sbjct: 178 HHGLKRRNMSDPNTNLIVNYLPQTLSDEDFKELFEKIGPLKSYKIVRDKATNYSYGFGFV 237
Query: 69 RFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIAAK 102
+ +A +A+ EMNG+ + + K IKV A K
Sbjct: 238 DYVNEEDAERAIHEMNGQKMDH--KTIKVSYARK 269
>gi|47086837|ref|NP_997763.1| RNA-binding motif protein, X chromosome [Danio rerio]
gi|82241461|sp|Q7ZWA3.1|RBMX_DANRE RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G
gi|29436819|gb|AAH49509.1| RNA binding motif protein, X-linked [Danio rerio]
gi|47846286|emb|CAG30733.1| RNA binding motif protein [Danio rerio]
gi|48735158|gb|AAH71326.1| RNA binding motif protein, X-linked [Danio rerio]
Length = 379
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 24 RLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI + +E L FS FG I E+ +KDR T +S+G A++ + +A A E
Sbjct: 9 KLFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPGDAKDAARE 68
Query: 83 MNGEFLPNHSKPIKVLIAAKLEFK 106
MNG+ L KPIKV A K +F+
Sbjct: 69 MNGKPL--DGKPIKVEQATKPQFE 90
>gi|157108428|ref|XP_001650224.1| splicing factor [Aedes aegypti]
gi|108879330|gb|EAT43555.1| AAEL005046-PA [Aedes aegypti]
Length = 544
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I+ + D +TG SKG +I F +A KA+E++NG L
Sbjct: 297 NITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKALEQLNGFELA-- 354
Query: 92 SKPIKV 97
+P+KV
Sbjct: 355 GRPMKV 360
>gi|410927510|ref|XP_003977185.1| PREDICTED: ELAV-like protein 1-like [Takifugu rubripes]
Length = 341
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ D+ FS FG I R + D+ TG S+GVA+IRF K +EA AV +NG+
Sbjct: 130 KSMTQKDVEDMFSRFGRIINSRVLVDQATGASRGVAFIRFDKRAEAEDAVNNLNGQKPSG 189
Query: 91 HSKPIKVLIAA 101
+PI V AA
Sbjct: 190 VVEPITVKFAA 200
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G++ E L Q F PFG + ++ ++D T + KG ++ S +AA A+ +
Sbjct: 261 IFIYNLGQEADETILWQMFGPFGAVTNVKVIRDFTTNKCKGFGFVTMSNYEDAAMAIASL 320
Query: 84 NG 85
NG
Sbjct: 321 NG 322
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++++++LR FS G ++ + ++D+ G S G ++ + S+A +A+ +NG L
Sbjct: 44 QNMSQEELRSLFSSIGEVESAKLIRDKIAGHSLGYGFVNYVTPSDAERAINTLNGLRL-- 101
Query: 91 HSKPIKVLIA 100
SK IKV A
Sbjct: 102 QSKNIKVSYA 111
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 12 RSREYNDE--PPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYI 68
R+R +ND+ PP L+I VTED + + F G++Q +R DR+TG KG Y+
Sbjct: 283 RARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYV 342
Query: 69 RFSKTSEAAKAVEEMNG 85
+FS +A A++ MNG
Sbjct: 343 QFSSVDDATAALKAMNG 359
Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 18 DEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
DE + +F+ +V D L+ F G + R V DR++ +S+G Y+ F+ +
Sbjct: 191 DEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLGSS 250
Query: 77 AKAVEEMNGEF 87
AKA+E+ E
Sbjct: 251 AKAIEKDGSEI 261
>gi|383862669|ref|XP_003706806.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Megachile rotundata]
Length = 612
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 17/126 (13%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+ ++ LR+ F+PFG I + + + G SKG ++ FS EA KAV EMNG + +
Sbjct: 307 INDERLRREFAPFGTITSAKVMME--DGRSKGFGFVCFSAPEEATKAVTEMNGRII--VT 362
Query: 93 KPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPG------IPMVVV 146
KP+ V +A + E ++ + ++ QY Q A R + G +PPG +P +
Sbjct: 363 KPLYVALAQRKEDRKAH-----LASQYM--QRLANMRMQQMGQMFPPGGAGNYFVPTIPQ 415
Query: 147 PDFSYG 152
P YG
Sbjct: 416 PQRFYG 421
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
D+TE L + FS G + IR +D T S G AY+ F + ++A +A++ MN + +
Sbjct: 21 DITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDMI--K 78
Query: 92 SKPIKVLIAAK 102
+PI+++ + +
Sbjct: 79 GRPIRIMWSQR 89
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGE 86
G+D+T+D L++ F +G I + V ++ G+S+G ++ F A +AV E+NG+
Sbjct: 200 GEDMTDDKLKEMFEKYGTITSHK-VMIKDDGKSRGFGFVAFEDPDAAEQAVLELNGK 255
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
K++ + FS FGNI + +D +G SKG ++ F A K+++++NG L
Sbjct: 108 KNIDNKAMYDTFSAFGNILSCKVAQDE-SGVSKGYGFVHFETEEAANKSIDKVNGMLL 164
>gi|195623700|gb|ACG33680.1| hypothetical protein [Zea mays]
Length = 237
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 21 PHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
P + + CG +V +D L + FS F + R V+D+ TG++KG ++ FS ++ A
Sbjct: 125 PENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA 184
Query: 78 KAVEEMNGEFLPNHSKPIKV 97
A++EMNG+++ N +PIK+
Sbjct: 185 AAIKEMNGKYVGN--RPIKL 202
>gi|83643344|ref|YP_431779.1| RNA-binding protein [Hahella chejuensis KCTC 2396]
gi|83631387|gb|ABC27354.1| RNA-binding protein (RRM domain) [Hahella chejuensis KCTC 2396]
Length = 92
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 38/52 (73%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMN 84
VTEDDLR+ F+ +G+I + ++DR+TG+SKG ++ S +A +A++++N
Sbjct: 12 VTEDDLREAFAAYGDISNVNIIRDRDTGQSKGFGFVEMSDNGQAEEAIQKLN 63
>gi|395507384|ref|XP_003758005.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Sarcophilus harrisii]
Length = 394
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 115 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 171
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 5 YRINTHDRSRE--YNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNT 59
Y NT S + N P S + CG +TE +RQ FSPFG I EIR D
Sbjct: 192 YESNTKQLSYDDVVNQSSP-SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD--- 247
Query: 60 GESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 248 ---KGYSFVRFNSHESAAHAIVSVNGTTIEGH 276
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 21 PHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
P ++LFI E LR+ FS +G + + R + DR TG S+G +I ++ EA+ A
Sbjct: 40 PSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSA 99
Query: 80 VEEMNGEFLPNHSKPIKVLIA 100
++ ++G+ L H +PI+V A
Sbjct: 100 IQALDGQDL--HGRPIRVNYA 118
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 12 RSREYNDE--PPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYI 68
R+R +ND+ PP L+I VTED + + F G++Q +R DR+TG KG Y+
Sbjct: 280 RARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYV 339
Query: 69 RFSKTSEAAKAVEEMNG 85
+FS +A+ A++ MNG
Sbjct: 340 QFSSVDDASAALKAMNG 356
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 18 DEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
DE + +F+ +V D L+ F G + R V DR++ +S+G Y+ F+ +
Sbjct: 188 DEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLESS 247
Query: 77 AKAVEEMNGEF 87
AKA+E+ E
Sbjct: 248 AKAIEKDGSEI 258
>gi|312374824|gb|EFR22303.1| hypothetical protein AND_15459 [Anopheles darlingi]
Length = 560
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I+ + D +TG SKG +I F +A KA+E++NG L
Sbjct: 313 NITEDMLRGIFEPFGKIDNIQLIMDTDTGRSKGYGFITFHNADDAKKALEQLNGFELA-- 370
Query: 92 SKPIKV 97
+P+KV
Sbjct: 371 GRPMKV 376
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 12 RSREYNDE--PPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYI 68
R+R +ND+ PP L+I VTED + + F G++Q +R DR+TG KG Y+
Sbjct: 283 RARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYV 342
Query: 69 RFSKTSEAAKAVEEMNG 85
+FS +A+ A++ MNG
Sbjct: 343 QFSSVDDASAALKAMNG 359
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 18 DEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
DE + +F+ +V D L+ F G + R V DR++ +S+G Y+ F+ +
Sbjct: 191 DEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLESS 250
Query: 77 AKAVEEMNGEF 87
AKA+E+ E
Sbjct: 251 AKAIEKDGSEI 261
>gi|6755783|ref|NP_035715.1| nucleolysin TIA-1 isoform 1 [Mus musculus]
gi|1729966|sp|P52912.1|TIA1_MOUSE RecName: Full=Nucleolysin TIA-1; AltName: Full=RNA-binding protein
TIA-1; AltName: Full=T-cell-restricted intracellular
antigen-1; Short=TIA-1
gi|437057|gb|AAA03711.1| TIA [Mus musculus]
gi|1616673|gb|AAC52871.1| RNA binding protein TIA-1 [Mus musculus]
gi|26353510|dbj|BAC40385.1| unnamed protein product [Mus musculus]
gi|74188216|dbj|BAE25782.1| unnamed protein product [Mus musculus]
gi|148666751|gb|EDK99167.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_a
[Mus musculus]
Length = 386
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 116 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 172
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +TE +RQ FSPFG I EIR D KG +++RFS AA A+ +
Sbjct: 216 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSV 269
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 270 NGTTIEGH 277
>gi|238487908|ref|XP_002375192.1| RNP domain protein [Aspergillus flavus NRRL3357]
gi|220700071|gb|EED56410.1| RNP domain protein [Aspergillus flavus NRRL3357]
Length = 382
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G +VT+D L + F+ + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 252 DPAHFRLFVGNLAG-EVTDDSLLKAFAKYTSVQKARVIRDKRTQKSKGYGFVSFSDGDDY 310
Query: 77 AKAVEEMNGEFLPNH 91
KA EM G+++ +H
Sbjct: 311 FKAAREMQGKYIGSH 325
>gi|116206982|ref|XP_001229300.1| hypothetical protein CHGG_02784 [Chaetomium globosum CBS 148.51]
gi|88183381|gb|EAQ90849.1| hypothetical protein CHGG_02784 [Chaetomium globosum CBS 148.51]
Length = 179
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 23 SRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
S+LFI E LRQ F FG ++E VKDR+TG S+G ++R++ +A KA+E
Sbjct: 2 SKLFIGGLAWHTEEPTLRQKFEEFGVVEEAVVVKDRDTGRSRGFGFVRYTNEGDAIKAIE 61
Query: 82 EMNGEFLPN 90
MN LP+
Sbjct: 62 AMNNVDLPS 70
>gi|114052629|ref|NP_001040075.1| RNA-binding motif protein, X chromosome [Bos taurus]
gi|119907483|ref|XP_001250252.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like [Bos
taurus]
gi|109892459|sp|Q29RT0.1|RBMX_BOVIN RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|88954147|gb|AAI14041.1| Testes-specific heterogenous nuclear ribonucleoprotein G-T [Bos
taurus]
gi|296480068|tpg|DAA22183.1| TPA: RNA binding motif protein, X-linked [Bos taurus]
Length = 396
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
+ E L F +G I E+ +KDR T +S+G A+I F ++A AV +MNG+ L
Sbjct: 18 ETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRDMNGKSL--D 75
Query: 92 SKPIKVLIAAKLEFKEGYRG 111
K IKV A K F+ G RG
Sbjct: 76 GKAIKVAQATKPAFESGRRG 95
>gi|391874076|gb|EIT83014.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 382
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G +VT+D L + F+ + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 252 DPAHFRLFVGNLAG-EVTDDSLLKAFAKYTSVQKARVIRDKRTQKSKGYGFVSFSDGDDY 310
Query: 77 AKAVEEMNGEFLPNH 91
KA EM G+++ +H
Sbjct: 311 FKAAREMQGKYIGSH 325
>gi|281346697|gb|EFB22281.1| hypothetical protein PANDA_002889 [Ailuropoda melanoleuca]
Length = 377
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 107 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 163
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y NT S E ++ S + CG +TE +RQ FSPFG I EIR D
Sbjct: 184 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD---- 239
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 240 --KGYSFVRFNSHESAAHAIVSVNGTTIEGH 268
>gi|184185564|gb|ACC68962.1| RNA binding motif protein 39 isoform a (predicted) [Rhinolophus
ferrumequinum]
Length = 498
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS + A KA+E++NG L
Sbjct: 260 NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG- 318
Query: 92 SKPIKV 97
+P+KV
Sbjct: 319 -RPMKV 323
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AY+ F S A+
Sbjct: 168 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 211
>gi|12641792|emb|CAC27531.1| eukaryotic translation initiation factor 3 p42 [Platichthys flesus]
Length = 125
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 39/55 (70%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
+D E DL++ F PFG+I I KD+NTG+SKG+A+I F + +AA+A+ ++G
Sbjct: 53 EDTRETDLQELFRPFGSISRIYLAKDKNTGQSKGLAFISFHRREDAARAIAGVSG 107
>gi|149036617|gb|EDL91235.1| rCG56007, isoform CRA_a [Rattus norvegicus]
Length = 386
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 116 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 172
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +TE +RQ FSPFG I EIR D KG ++IRFS AA A+ +
Sbjct: 216 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFIRFSSHESAAHAIVSV 269
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 270 NGTTIEGH 277
>gi|118792383|ref|XP_320292.3| AGAP012250-PA [Anopheles gambiae str. PEST]
gi|116116874|gb|EAA00555.3| AGAP012250-PA [Anopheles gambiae str. PEST]
Length = 209
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 1 MDRNYRINTHDRSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
++ NYR N R+ P H+ VTE+ LR F+PFG I R V D TG
Sbjct: 45 INSNYRPN-----RKVKGNPLHTIFIGRLAHSVTEEQLRAKFAPFGTIVHARLVTDIVTG 99
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNG 85
+G A+I +S EA +A+E M+G
Sbjct: 100 LPRGYAFIEYSARGEALRAIERMHG 124
>gi|443691317|gb|ELT93212.1| hypothetical protein CAPTEDRAFT_183838 [Capitella teleta]
Length = 462
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 59/102 (57%), Gaps = 7/102 (6%)
Query: 1 MDRNYRINTHDRSREYNDEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNT 59
M+R ++ D D +LF+ + K +E+++RQ FSP+G+I+E ++D+N
Sbjct: 87 MNRPIQVKPADSESRAEDR----KLFVGMLNKQQSEEEVRQMFSPYGSIEECTILRDQN- 141
Query: 60 GESKGVAYIRFSKTSEAAKAVEEMNG-EFLPNHSKPIKVLIA 100
G SKG A+++F+ ++A A+ ++G + +P S + V A
Sbjct: 142 GNSKGCAFVKFTTHADAQAAINALHGSQTMPGASSSLVVKFA 183
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGE-FLP 89
+++ E DLR F FG I E+ +KDR TG KG A++ + A KA + ++ + LP
Sbjct: 26 RNLEEKDLRPIFEEFGQIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQQALHEQKTLP 85
Query: 90 NHSKPIKV 97
++PI+V
Sbjct: 86 GMNRPIQV 93
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 20 PPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
P LFI ++ + +L Q F PFGN+ + DR T +SK ++ F + A
Sbjct: 374 PEGCNLFIYHLPQEFGDAELAQMFMPFGNVISAKVYIDRATNQSKCFGFVSFDNPASAQA 433
Query: 79 AVEEMNG 85
A++ MNG
Sbjct: 434 AIQAMNG 440
>gi|426335862|ref|XP_004029425.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Gorilla gorilla gorilla]
Length = 353
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 83 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 139
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y NT S E ++ S + CG +TE +RQ FSPFG I EIR D
Sbjct: 160 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD---- 215
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 216 --KGYSFVRFNSHESAAHAIVSVNGTTIEGH 244
>gi|402891170|ref|XP_003908827.1| PREDICTED: nucleolysin TIA-1 isoform p40, partial [Papio anubis]
Length = 377
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 107 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 163
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y NT S E ++ S + CG +TE +RQ FSPFG I EIR D
Sbjct: 184 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD---- 239
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 240 --KGYSFVRFNSHESAAHAIVSVNGTTIEGH 268
>gi|378727388|gb|EHY53847.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 179
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 23 SRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
++LFI T++ L +GFS FGNI+E VKDR+T S+G ++RF+ +EA +A++
Sbjct: 2 AKLFIGGLAWHTTDETLYEGFSQFGNIEEAVVVKDRDTNRSRGFGFVRFATKAEADEAMQ 61
Query: 82 EMN 84
MN
Sbjct: 62 RMN 64
>gi|387017378|gb|AFJ50807.1| Nucleolysin TIA-1 isoform p40 [Crotalus adamanteus]
Length = 392
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 116 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 172
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 23 SRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
S + CG +TE +RQ FSPFG I EIR D KG +++RF+ AA A
Sbjct: 212 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHA 265
Query: 80 VEEMNGEFLPNH 91
+ +NG + H
Sbjct: 266 IVSVNGTTIEGH 277
>gi|348566571|ref|XP_003469075.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Cavia porcellus]
Length = 388
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 116 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 172
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 23 SRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
S + CG +TE +RQ FSPFG I EIR D KG +++RF+ AA A
Sbjct: 212 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHA 265
Query: 80 VEEMNGEFLPNH 91
+ +NG + H
Sbjct: 266 IVSVNGTTIEGH 277
>gi|260834973|ref|XP_002612484.1| hypothetical protein BRAFLDRAFT_214383 [Branchiostoma floridae]
gi|229297861|gb|EEN68493.1| hypothetical protein BRAFLDRAFT_214383 [Branchiostoma floridae]
Length = 466
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I+ +KD TG SKG +I F A KA+E++NG L
Sbjct: 154 NITEDMLRGIFEPFGKIDNIQLMKDSETGRSKGYGFITFHDAECAKKALEQLNGFELA-- 211
Query: 92 SKPIKV 97
+P+KV
Sbjct: 212 GRPMKV 217
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
DL FS G ++E+R + DRN+ KG+AY F+ S A+ N + L
Sbjct: 62 DLEDFFSSVGKVREVRLIADRNSRRHKGIAYCEFTDASCVPMAIGLTNQKLL 113
>gi|126304035|ref|XP_001381740.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Monodelphis domestica]
Length = 409
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 130 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 186
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 5 YRINTHDRSRE--YNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNT 59
Y NT S + N P S + CG +TE +RQ FSPFG I EIR D
Sbjct: 207 YESNTKQLSYDDVVNQSSP-SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD--- 262
Query: 60 GESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 263 ---KGYSFVRFNSHESAAHAIVSVNGTTIEGH 291
>gi|297307145|ref|NP_001167497.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Xenopus laevis]
gi|50416510|gb|AAH77169.1| Unknown (protein for MGC:78766) [Xenopus laevis]
Length = 385
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
+++ DD++ F+PFG I + R VKD TG+SKG ++ F +A A+ +M G++L
Sbjct: 116 EISTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWL 172
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 23 SRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
S + CG ++E +RQ FSPFG I E+R D KG +++RFS AA A
Sbjct: 212 SNCTVYCGGVTSGLSEQLMRQTFSPFGQIMEVRVFPD------KGYSFVRFSSHESAAHA 265
Query: 80 VEEMNGEFLPNH 91
+ +NG + H
Sbjct: 266 IVSVNGTTIEGH 277
>gi|317032188|ref|XP_001394209.2| RNP domain protein [Aspergillus niger CBS 513.88]
gi|350631050|gb|EHA19421.1| hypothetical protein ASPNIDRAFT_38839 [Aspergillus niger ATCC 1015]
Length = 381
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G +VT+D L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 251 DPAHFRLFVGNLAG-EVTDDSLLKAFSKYTSVQKARVIRDKRTQKSKGYGFVSFSDGDDY 309
Query: 77 AKAVEEMNGEFLPNH 91
KA EM G+++ +H
Sbjct: 310 FKAAREMQGKYIGSH 324
>gi|378726298|gb|EHY52757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 481
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 156 RVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRS 215
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIA 100
+G ++ F + ++A KA+ M+GE+L S+ I+V A
Sbjct: 216 RGYGFVAFRERADAEKALASMDGEWL--GSRAIRVNWA 251
>gi|226530162|ref|NP_001140428.1| uncharacterized protein LOC100272487 [Zea mays]
gi|194699468|gb|ACF83818.1| unknown [Zea mays]
gi|414590763|tpg|DAA41334.1| TPA: hypothetical protein ZEAMMB73_458862 [Zea mays]
Length = 237
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 21 PHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
P + + CG +V +D L + FS F + R V+D+ TG++KG ++ FS ++ A
Sbjct: 125 PENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA 184
Query: 78 KAVEEMNGEFLPNHSKPIKV 97
A++EMNG+++ N +PIK+
Sbjct: 185 AAIKEMNGKYVGN--RPIKL 202
>gi|115497910|ref|NP_001069577.1| nucleolysin TIA-1 isoform p40 [Bos taurus]
gi|111308630|gb|AAI20428.1| TIA1 cytotoxic granule-associated RNA binding protein [Bos taurus]
gi|296482421|tpg|DAA24536.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein [Bos
taurus]
Length = 384
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 116 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 172
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y NT S E ++ S + CG +TE +RQ FSPFG I EIR D
Sbjct: 193 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD---- 248
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 249 --KGYSFVRFNSHESAAHAIVSVNGTTIEGH 277
>gi|16215606|emb|CAC95018.1| TIA-1 protein [Xenopus laevis]
Length = 388
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
+++ DD++ F+PFG I + R VKD TG+SKG ++ F +A A+ +M G++L
Sbjct: 116 EISTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWL 172
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 23 SRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
S + CG ++E +RQ FSPFG I E+R D KG +++RFS AA A
Sbjct: 212 SNCTVYCGGVTSGLSEQLMRQTFSPFGQIMEVRVFPD------KGYSFVRFSSHESAAHA 265
Query: 80 VEEMNGEFLPNH 91
+ +NG + H
Sbjct: 266 IVSVNGTTIEGH 277
>gi|225682885|gb|EEH21169.1| nucleolysin TIA-1 [Paracoccidioides brasiliensis Pb03]
Length = 471
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 171 RVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRS 230
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + S+A KA+ M+GE+L
Sbjct: 231 RGYGFVAFRERSDAEKALSSMDGEWL 256
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY--IRFSKTSEA 76
P+ R + G D VTED LRQ F G++Q ++ + D+N SKG+ Y + + A
Sbjct: 97 PNKRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKN---SKGLNYGFVEYDDPGAA 153
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A+ +NG + H I+V A
Sbjct: 154 ERAMATLNGRRV--HQSEIRVNWA 175
>gi|426223382|ref|XP_004005854.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Ovis aries]
gi|440907815|gb|ELR57912.1| Nucleolysin TIA-1 isoform p40 [Bos grunniens mutus]
Length = 386
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 116 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 172
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y NT S E ++ S + CG +TE +RQ FSPFG I EIR D
Sbjct: 193 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD---- 248
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 249 --KGYSFVRFNSHESAAHAIVSVNGTTIEGH 277
>gi|73969892|ref|XP_866571.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 9 [Canis lupus
familiaris]
gi|301758208|ref|XP_002914947.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Ailuropoda
melanoleuca]
gi|410954995|ref|XP_003984144.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Felis catus]
gi|431912606|gb|ELK14624.1| Nucleolysin TIA-1 isoform p40 [Pteropus alecto]
Length = 386
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 116 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 172
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y NT S E ++ S + CG +TE +RQ FSPFG I EIR D
Sbjct: 193 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD---- 248
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 249 --KGYSFVRFNSHESAAHAIVSVNGTTIEGH 277
>gi|84579137|dbj|BAE73002.1| hypothetical protein [Macaca fascicularis]
Length = 385
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 116 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 172
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y NT S E ++ S + CG +TE +RQ FSPFG I EIR D
Sbjct: 193 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD---- 248
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 249 --KGYSFVRFNSHESAAHAIVSVNGTTIEGH 277
>gi|169769765|ref|XP_001819352.1| RNP domain protein [Aspergillus oryzae RIB40]
gi|83767211|dbj|BAE57350.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 382
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G +VT+D L + F+ + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 252 DPAHFRLFVGNLAG-EVTDDSLLKAFAKYTSVQKARVIRDKRTQKSKGYGFVSFSDGDDY 310
Query: 77 AKAVEEMNGEFLPNH 91
KA EM G+++ +H
Sbjct: 311 FKAAREMQGKYIGSH 325
>gi|110756942|ref|XP_395357.3| PREDICTED: nucleolysin TIAR [Apis mellifera]
gi|340713958|ref|XP_003395500.1| PREDICTED: nucleolysin TIAR-like [Bombus terrestris]
gi|350421173|ref|XP_003492759.1| PREDICTED: nucleolysin TIAR-like [Bombus impatiens]
gi|380025693|ref|XP_003696603.1| PREDICTED: nucleolysin TIAR-like [Apis florea]
Length = 392
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 18 DEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ ++ L++ F+PFG I R V+D T +SKG A++ F K SEA
Sbjct: 91 DTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKSEA 150
Query: 77 AKAVEEMNGEFL 88
A+ MNG++L
Sbjct: 151 EAAIAAMNGQWL 162
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 34/140 (24%)
Query: 16 YNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
YN P + + CG +T+D + + FSPFG IQ+IR KD KG A+I+F+
Sbjct: 198 YNQSSP-TNCTVYCGGFTNGITDDLITKTFSPFGTIQDIRVFKD------KGYAFIKFTT 250
Query: 73 TSEAAKAVE-----EMNGEFL---------------PNHSKPIKVLIAAKLEFKEGYRGG 112
A A+E E+NG + PN + + + A ++ GY G
Sbjct: 251 KEAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQQVTAGAGQYAYGY--G 308
Query: 113 QKISVQYTSPQSAAYARDKF 132
Q++S Y PQ + +F
Sbjct: 309 QQMSYWY--PQGYPQMQGQF 326
>gi|326497929|dbj|BAJ94827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 469
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 20 PPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PP L G +D TE+DLRQ P G I E+R +KD+ T E+KG A++ F+ A
Sbjct: 105 PPQGSEVFLGGLPRDTTEEDLRQLCEPLGEIFEVRLMKDKETKENKGFAFVTFTAKDVAQ 164
Query: 78 KAVEEMN 84
A+EE++
Sbjct: 165 HAIEELH 171
>gi|168016155|ref|XP_001760615.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688312|gb|EDQ74690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 176
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 15/112 (13%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+T +DL FS FG I ++ VKD+ T ESKGVA+I ++ +A AV+ MNG+ L +
Sbjct: 30 LTNNDLHTIFSTFGKIGKVTIVKDKQTRESKGVAFILYASRDDAHAAVKTMNGKIL--NK 87
Query: 93 KPIKVLIAA----------KLEFKE---GYRGGQKISVQYTSPQSAAYARDK 131
+ +KV IA + E+K+ Y G+ + Y P++ +R++
Sbjct: 88 RTLKVSIAEDNGRAKEFIRRREYKDKSRCYECGEGGHLSYECPKNLLGSRER 139
>gi|145349140|ref|XP_001418998.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579228|gb|ABO97291.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 572
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDD-LRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
RE ++ + L+I +D T+D+ LR+ F FG I R ++D +G S+G A++ FS
Sbjct: 309 RERMEKMAGANLYIKNLEDGTDDEKLRELFKEFGTITSCRVMRDA-SGVSRGSAFVAFSS 367
Query: 73 TSEAAKAVEEMNGEFLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKF 132
EA +AV EMNG+ + +KP+ V +A + E + ++ Q+ A
Sbjct: 368 PDEATRAVTEMNGKMV--GAKPLYVALAQRKEERR-----MRLQAQFAQRMPGAGMPGGM 420
Query: 133 HGFAYPPGIP 142
+ PPG+P
Sbjct: 421 APYMPPPGVP 430
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
VTE L + FS G + IR +D T S G AY+ F ++AA A++ +N + + +
Sbjct: 48 VTEAQLYEKFSSIGPVVSIRVCRDLITRRSLGYAYVNFQSPNDAAHAIDVLNFQVI--NG 105
Query: 93 KPIKVL 98
KPI+VL
Sbjct: 106 KPIRVL 111
>gi|188219591|ref|NP_071505.2| nucleolysin TIA-1 isoform p40 isoform 2 [Homo sapiens]
gi|114577930|ref|XP_001141557.1| PREDICTED: uncharacterized protein LOC459303 isoform 2 [Pan
troglodytes]
gi|397521824|ref|XP_003830986.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Pan paniscus]
gi|206729905|sp|P31483.3|TIA1_HUMAN RecName: Full=Nucleolysin TIA-1 isoform p40; AltName:
Full=RNA-binding protein TIA-1; AltName:
Full=T-cell-restricted intracellular antigen-1;
Short=TIA-1; AltName: Full=p40-TIA-1
gi|62702267|gb|AAX93193.1| unknown [Homo sapiens]
gi|119620230|gb|EAW99824.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_b [Homo sapiens]
gi|261861076|dbj|BAI47060.1| TIA1 cytotoxic granule-associated RNA binding protein [synthetic
construct]
gi|410226260|gb|JAA10349.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410254978|gb|JAA15456.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298556|gb|JAA27878.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353839|gb|JAA43523.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 386
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 116 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 172
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y NT S E ++ S + CG +TE +RQ FSPFG I EIR D
Sbjct: 193 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD---- 248
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 249 --KGYSFVRFNSHESAAHAIVSVNGTTIEGH 277
>gi|387762942|ref|NP_001248687.1| TIA1 cytotoxic granule-associated RNA binding protein [Macaca
mulatta]
gi|84579193|dbj|BAE73030.1| hypothetical protein [Macaca fascicularis]
gi|355565763|gb|EHH22192.1| hypothetical protein EGK_05415 [Macaca mulatta]
gi|355751389|gb|EHH55644.1| hypothetical protein EGM_04890 [Macaca fascicularis]
gi|380816026|gb|AFE79887.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|383421173|gb|AFH33800.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|384949108|gb|AFI38159.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
Length = 386
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 116 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 172
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y NT S E ++ S + CG +TE +RQ FSPFG I EIR D
Sbjct: 193 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD---- 248
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 249 --KGYSFVRFNSHESAAHAIVSVNGTTIEGH 277
>gi|410298560|gb|JAA27880.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 388
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 118 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 174
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y NT S E ++ S + CG +TE +RQ FSPFG I EIR D
Sbjct: 195 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD---- 250
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 251 --KGYSFVRFNSHESAAHAIVSVNGTTIEGH 279
>gi|345308310|ref|XP_003428682.1| PREDICTED: ELAV-like protein 2-like [Ornithorhynchus anatinus]
Length = 595
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 369 KTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPG 428
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 429 ATEPITVKFA 438
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 522 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 575
>gi|390474361|ref|XP_003734771.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Callithrix jacchus]
gi|403260486|ref|XP_003922702.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 386
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 116 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 172
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y NT S E ++ S + CG +TE +RQ FSPFG I EIR D
Sbjct: 193 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD---- 248
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 249 --KGYSFVRFNSHESAAHAIVSVNGTTIEGH 277
>gi|115478012|ref|NP_001062601.1| Os09g0123200 [Oryza sativa Japonica Group]
gi|34555646|gb|AAQ74971.1| flowering time control protein isoform OsFCA-3 [Oryza sativa Indica
Group]
gi|113630834|dbj|BAF24515.1| Os09g0123200 [Oryza sativa Japonica Group]
Length = 637
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 24 RLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI + TEDD+R F G++ E+ +KDR TGE +G +++++ + EA +A+
Sbjct: 22 KLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIRA 81
Query: 83 MNGEF-LPNHSKPIKVLIA 100
++ ++ LP PI+V A
Sbjct: 82 LHNQYTLPGAMGPIQVRYA 100
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 24 RLFILC-GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LF+ K T ++ + F+P+G+++++ +KD +S+G +++FS A A+
Sbjct: 113 KLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKD-GMRQSRGCGFVKFSSREPALAAMSA 171
Query: 83 MNGEFL 88
++G ++
Sbjct: 172 LSGNYV 177
>gi|33390912|gb|AAQ17123.1| flowering time control protein isoform OsFCA-1 [Oryza sativa Indica
Group]
gi|47496990|dbj|BAD20100.1| Flowering time control protein FCA gamma-like [Oryza sativa
Japonica Group]
gi|50261763|gb|AAT72462.1| FCA gamma protein [Oryza sativa Japonica Group]
gi|58003966|gb|AAW62371.1| FCA [Oryza sativa Japonica Group]
Length = 738
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 24 RLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI + TEDD+R F G++ E+ +KDR TGE +G +++++ + EA +A+
Sbjct: 123 KLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIRA 182
Query: 83 MNGEF-LPNHSKPIKVLIA 100
++ ++ LP PI+V A
Sbjct: 183 LHNQYTLPGAMGPIQVRYA 201
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 24 RLFILC-GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LF+ K T ++ + F+P+G+++++ +KD +S+G +++FS A A+
Sbjct: 214 KLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKD-GMRQSRGCGFVKFSSREPALAAMSA 272
Query: 83 MNGEFL 88
++G ++
Sbjct: 273 LSGNYV 278
>gi|392593259|gb|EIW82584.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 116
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
+ T+D LRQ FS FGN+ + ++DR+TG S+G ++ +S T EA A+ +N + L
Sbjct: 14 NTTDDTLRQAFSTFGNVVDSVVMRDRDTGRSRGFGFVTYSSTQEAESAISGLNDQDL--D 71
Query: 92 SKPIKVLIA 100
+ IKV IA
Sbjct: 72 GRRIKVNIA 80
>gi|383863609|ref|XP_003707272.1| PREDICTED: nucleolysin TIAR-like [Megachile rotundata]
Length = 392
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 18 DEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ ++ L++ F+PFG I R V+D T +SKG A++ F K SEA
Sbjct: 91 DTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKSEA 150
Query: 77 AKAVEEMNGEFL 88
A+ MNG++L
Sbjct: 151 EAAIAAMNGQWL 162
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 34/140 (24%)
Query: 16 YNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
YN P + + CG +T++ + + FSPFG IQ+IR KD KG A+I+F+
Sbjct: 198 YNQSSP-TNCTVYCGGFTNGITDELINKTFSPFGTIQDIRVFKD------KGYAFIKFTT 250
Query: 73 TSEAAKAVE-----EMNGEFL---------------PNHSKPIKVLIAAKLEFKEGYRGG 112
A A+E E+NG + PN + + + A ++ GY G
Sbjct: 251 KEAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQQVTAGAGQYAYGY--G 308
Query: 113 QKISVQYTSPQSAAYARDKF 132
Q++ Y PQ + +F
Sbjct: 309 QQMGYWY--PQGYPQMQGQF 326
>gi|328715702|ref|XP_003245699.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2
[Acyrthosiphon pisum]
gi|328715706|ref|XP_003245700.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 3
[Acyrthosiphon pisum]
Length = 420
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 22 HSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
H +F+ ++ LR+ F+PFG I + R V+D T +SKG ++ F K +EA A+
Sbjct: 61 HHHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKAEAESAI 120
Query: 81 EEMNGEFL 88
MNG++L
Sbjct: 121 AAMNGQWL 128
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 2 DRNYRINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
D N + T D YN P + + CG +T++ +++ F+PFGNIQEIR KD
Sbjct: 148 DSNTKPLTFDEV--YNQSSP-TNCTVYCGGLTSGLTDELVQKTFAPFGNIQEIRVFKD-- 202
Query: 59 TGESKGVAYIRFSKTSEAAKAV-----EEMNGE 86
KG A++RF+ A A+ ++NG+
Sbjct: 203 ----KGYAFVRFATKESATHAIVAVHNSDINGQ 231
>gi|295673548|ref|XP_002797320.1| RNP domain-containing protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282692|gb|EEH38258.1| RNP domain-containing protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 519
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G +VT+D L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 365 DPAHFRLFVGNLAG-EVTDDSLLKAFSKYPSVQKARVIRDKRTEKSKGYGFVSFSDGEDY 423
Query: 77 AKAVEEMNGEFLPNH 91
+A EM G+++ +H
Sbjct: 424 FRAAREMQGKYIGSH 438
>gi|395859409|ref|XP_003802032.1| PREDICTED: probable RNA-binding protein 23 [Otolemur garnettii]
Length = 449
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 278 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 336
Query: 92 SKPIKV 97
+P+KV
Sbjct: 337 -RPMKV 341
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 186 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 229
>gi|358421488|ref|XP_003584982.1| PREDICTED: eLAV (embryonic lethal, abnormal vision,
Drosophila)-like 2 (Hu antigen B)-like, partial [Bos
taurus]
Length = 224
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 23 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 82
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 83 ATEPITVKFA 92
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+
Sbjct: 175 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 223
>gi|344283907|ref|XP_003413712.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Loxodonta
africana]
Length = 386
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 116 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 172
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y NT S E ++ S + CG +TE +RQ FSPFG I EIR D
Sbjct: 193 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD---- 248
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 249 --KGYSFVRFNSHESAAHAIVSVNGTTIEGH 277
>gi|334186264|ref|NP_001190648.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332656543|gb|AEE81943.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 495
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 20 PPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PPH + G +DV E+DLR G I E+R +KDR++G+SKG A++ F A
Sbjct: 112 PPHGSEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQ 171
Query: 78 KAVEEMNGEFLPNHSKPIKVLIAAKLEF 105
KA+EE+ HSK K A
Sbjct: 172 KAIEEL-------HSKEFKASSTANCSL 192
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 12 RSREYNDE--PPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYI 68
R++ +ND+ PP L+I VTED + + F G++Q +R DR+TG KG Y+
Sbjct: 281 RAKVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYV 340
Query: 69 RFSKTSEAAKAVEEMNG 85
+FS +A+ A++ MNG
Sbjct: 341 QFSSVEDASAALKAMNG 357
>gi|225438781|ref|XP_002283105.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|296082381|emb|CBI21386.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+ +D LR+ FS FG I + ++D N G S+G ++ FS EA++A+ +MNG+ + S
Sbjct: 325 IADDKLRELFSEFGTITSCKVMRDPN-GISRGSGFVAFSTAEEASRALADMNGKMV--AS 381
Query: 93 KPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFA-YPPGIP 142
KP+ V +A + KE R ++ Q++ + AA A + YPPG P
Sbjct: 382 KPLYVALAQR---KEDRRA--RLQAQFSQMRPAAMAPSVGPRMSMYPPGAP 427
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ T++DL+ F +G I ++D + G+SK ++ F +AA++VE +NG+
Sbjct: 220 ESTTDEDLKNIFGEYGPITSAVVMQDGD-GKSKCFGFVNFENADDAARSVEALNGK---- 274
Query: 91 HSKPIKVLIAAKLEFKEGYRGG------QKISVQYTSPQSAAYARDKFHGF 135
K + KE Y G +++ ++ QS A DKF G
Sbjct: 275 -----------KFDDKEWYVGKAQKKTEREVELKGRFEQSLKEAVDKFQGL 314
>gi|351714346|gb|EHB17265.1| Nucleolysin TIA-1 isoform p40 [Heterocephalus glaber]
Length = 386
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 116 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 172
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 23 SRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
S + CG +TE +RQ FSPFG I EIR D KG +++RF+ AA A
Sbjct: 212 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHA 265
Query: 80 VEEMNGEFLPNH 91
+ +NG + H
Sbjct: 266 IVSVNGTTIEGH 277
>gi|303272375|ref|XP_003055549.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463523|gb|EEH60801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 606
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 14 REYNDEPPHSRLFILCGKDVTED-DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
RE ++ + L+I +D +D LR+ F+ FG I R ++D G S+G A++ FS
Sbjct: 304 RERMEKMAGANLYIKNLEDTVDDAKLRELFAEFGTITSCRVMRD-TAGASRGSAFVAFSS 362
Query: 73 TSEAAKAVEEMNGEFLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKF 132
EA +AV EMNG+ KP+ V +A + KE R ++ Q+ Q AA
Sbjct: 363 ADEATRAVTEMNGKMA--GQKPLYVALAQR---KEDRR--LRLQAQFAQRQVAAGGMPNM 415
Query: 133 HGFAY-PPGIPMVVVPDFSYGLPRNG 157
+ PPG PM YG P G
Sbjct: 416 GPYGMPPPGAPMY------YGQPPPG 435
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
+ VTE+ LR+ F FG + + +KD G+SKG ++ + A K+VEE++G
Sbjct: 218 ESVTEEKLREVFEKFGALTSVVVMKDAE-GKSKGFGFVCYEDAEAAGKSVEELDG 271
Score = 36.6 bits (83), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
K++ L F+ FGNI + D G+SKG +++F A A+E++NG L
Sbjct: 129 KEIDNKALYDTFAQFGNIVSAKVATDLQ-GQSKGYGFVQFDTEEGAQSAIEKVNGMLL 185
>gi|432858816|ref|XP_004068953.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Oryzias latipes]
Length = 529
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS A KA+E++NG L
Sbjct: 262 NITEDMLRGIFEPFGRIENIQLMMDSETGRSKGYGFITFSDAECAKKALEQLNGFELA-- 319
Query: 92 SKPIKV 97
+P+KV
Sbjct: 320 GRPMKV 325
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AYI F + S A+
Sbjct: 168 DLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEASSVPLAI 211
>gi|293336981|ref|NP_001169115.1| uncharacterized protein LOC100382959 [Zea mays]
gi|223975005|gb|ACN31690.1| unknown [Zea mays]
gi|414887554|tpg|DAA63568.1| TPA: hypothetical protein ZEAMMB73_633512 [Zea mays]
Length = 103
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TE++ + FSPFG ++E R ++D TG KG ++++S +EA KAV+ M+G+ L
Sbjct: 32 TTEEEFKDIFSPFGTVEEARLMRDHQTGRMKGFGFVKYSSQAEAEKAVKAMDGKIL 87
>gi|385305287|gb|EIF49275.1| nuclear localization sequence binding protein [Dekkera bruxellensis
AWRI1499]
Length = 358
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 10 HDRSREYNDEP--PHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVA 66
++R+++Y D P P LF+ + T DD+R F FG+I+ IR T + +G A
Sbjct: 200 NNRAKKYGDTPSEPSDTLFVGNLSFEATMDDVRGAFESFGSIEXIRIPTRPGTEDPRGFA 259
Query: 67 YIRFSKTSEAAKAVEEMNGEFLPNHS 92
Y++FS EA A++ MNGE++ S
Sbjct: 260 YVQFSSVEEAKAALDGMNGEYINGRS 285
>gi|348504906|ref|XP_003440002.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Oreochromis
niloticus]
Length = 335
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +++ D+ FS +G I R + D+ +G S+GVA+IRF K +EA AV+ +NG P
Sbjct: 126 RTLSQQDVEDMFSHYGRIINSRVLVDQASGLSRGVAFIRFDKRAEADDAVKHLNGHTPPG 185
Query: 91 HSKPIKVLIAA 101
++PI V AA
Sbjct: 186 SAEPITVKFAA 196
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G++ E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 255 IFIYNLGQEADEAMLWQMFGPFGAVLNVKVIRDFNTNKCKGFGFVTMANYEEAAMAIHSL 314
Query: 84 NG 85
NG
Sbjct: 315 NG 316
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 18 DEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
DE + L + + +++D+LR FS G ++ + ++D+ G S G ++ F S+A
Sbjct: 26 DEDARTNLIVNYLPQSMSQDELRSLFSSVGEVESAKLIRDKVAGHSLGYGFVNFVNPSDA 85
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A+ +NG L SK IKV A
Sbjct: 86 ERAISTLNG--LRLQSKTIKVSFA 107
>gi|270007747|gb|EFA04195.1| hypothetical protein TcasGA2_TC014444 [Tribolium castaneum]
Length = 522
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I+ + D TG SKG +I F +A KA+E++NG L
Sbjct: 272 NITEDMLRSIFEPFGKIDNIQLIMDPETGRSKGYGFIAFRNCEDAKKALEQLNGFEL--A 329
Query: 92 SKPIKV 97
+P+KV
Sbjct: 330 GRPMKV 335
>gi|93115150|gb|ABE98247.1| ELAV-like [Oreochromis mossambicus]
Length = 283
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +++ D+ FS +G I R + D+ +G S+GVA+IRF K +EA AV+ +NG P
Sbjct: 74 RTLSQQDVEDMFSHYGRIINSRVLVDQASGLSRGVAFIRFDKRAEADDAVKHLNGHTPPG 133
Query: 91 HSKPIKVLIAA 101
++PI V AA
Sbjct: 134 SAEPITVKFAA 144
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 25 LFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMN 84
L + G++ E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +N
Sbjct: 204 LHLQPGQEADEAMLWQMFGPFGAVLNVKVIRDFNTNKCKGFGFVTMANYEEAAMAIHSLN 263
Query: 85 G 85
G
Sbjct: 264 G 264
>gi|395731713|ref|XP_002811971.2| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40
[Pongo abelii]
Length = 386
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 116 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 172
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 5 YRINTHDRSR-EYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTG 60
Y NT S E ++ S + CG +TE +RQ FSPFG I EIR D
Sbjct: 193 YESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD---- 248
Query: 61 ESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
KG +++RF+ AA A+ +NG + H
Sbjct: 249 --KGYSFVRFNSHESAAHAIVSVNGTTIEGH 277
>gi|291245052|ref|XP_002742405.1| PREDICTED: MGC81970 protein-like isoform 2 [Saccoglossus
kowalevskii]
Length = 444
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TE+ LR F PFG I I+ +KD TG SKG +I F +A KA+E++NG L
Sbjct: 154 NITEEMLRGIFEPFGKIDNIQLMKDNETGRSKGYGFITFHDAEDAKKALEQLNGFEL--A 211
Query: 92 SKPIKV 97
+P+KV
Sbjct: 212 GRPMKV 217
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 12 RSREYNDEPPHSR--LFILC---GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVA 66
+ ++ D PP R + C + + D+ + FS G ++++R + DRN+ SKG+A
Sbjct: 32 KKKDLPDLPPEERDARTVFCWQLSQKIRPRDMEEFFSSVGIVRDVRLISDRNSRRSKGIA 91
Query: 67 YIRFSKTSEAAKAV 80
Y+ F + A+
Sbjct: 92 YVEFQDKNSVPLAL 105
>gi|218201679|gb|EEC84106.1| hypothetical protein OsI_30426 [Oryza sativa Indica Group]
Length = 758
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 24 RLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI + TEDD+R F G++ E+ +KDR TGE +G +++++ + EA +A+
Sbjct: 123 KLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIRA 182
Query: 83 MNGEF-LPNHSKPIKVLIA 100
++ ++ LP PI+V A
Sbjct: 183 LHNQYTLPGAMGPIQVRYA 201
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 24 RLFILC-GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LF+ K T ++ + F+P+G+++++ +KD +S+G +++FS A A+
Sbjct: 214 KLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKD-GMRQSRGCGFVKFSSREPALAAMSA 272
Query: 83 MNGEFL 88
++G ++
Sbjct: 273 LSGNYV 278
>gi|405951422|gb|EKC19336.1| Eukaryotic translation initiation factor 3 subunit G-A [Crassostrea
gigas]
Length = 1399
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
+D E DL++ F PFG IQ I KD+NTG+SKG A+I F + +AA+A+ ++G
Sbjct: 320 EDTRESDLQELFRPFGPIQRIYLAKDKNTGQSKGFAFINFHRREDAARAIAGVSG 374
>gi|395514484|ref|XP_003761447.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Sarcophilus
harrisii]
Length = 347
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P+
Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPS 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 274 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 327
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|327263683|ref|XP_003216647.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Anolis carolinensis]
Length = 397
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 172 KTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPG 231
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 232 ATEPITVKFA 241
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 324 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 377
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 86 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 143
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 144 QTKTIKV 150
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 9 THDRSREYNDE--PPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGV 65
T +R++++ND+ P S LFI DV+EDD+ FS G + +R KD ++G KG
Sbjct: 296 TENRAKKFNDQRSAPSSTLFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGF 355
Query: 66 AYIRFSKTSEAAKAVEEMNGEFL 88
Y+ F+ A A++ M G+ L
Sbjct: 356 GYVEFAAQESAQAAIDAMTGQEL 378
>gi|302757135|ref|XP_002961991.1| hypothetical protein SELMODRAFT_9008 [Selaginella moellendorffii]
gi|302775356|ref|XP_002971095.1| hypothetical protein SELMODRAFT_9010 [Selaginella moellendorffii]
gi|300161077|gb|EFJ27693.1| hypothetical protein SELMODRAFT_9010 [Selaginella moellendorffii]
gi|300170650|gb|EFJ37251.1| hypothetical protein SELMODRAFT_9008 [Selaginella moellendorffii]
Length = 80
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 43/63 (68%)
Query: 35 EDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKP 94
++ L++ FS FG I+E++ +KDR TG SKG +++F+ + A++AV MNG + + +
Sbjct: 17 DESLKRLFSSFGQIEEVKVIKDRTTGASKGYGFVKFTDPAAASQAVFSMNGWKIEDKTLA 76
Query: 95 IKV 97
+++
Sbjct: 77 VRI 79
>gi|432858814|ref|XP_004068952.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Oryzias latipes]
Length = 502
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I FS A KA+E++NG L
Sbjct: 235 NITEDMLRGIFEPFGRIENIQLMMDSETGRSKGYGFITFSDAECAKKALEQLNGFEL--A 292
Query: 92 SKPIKV 97
+P+KV
Sbjct: 293 GRPMKV 298
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AYI F + S A+
Sbjct: 141 DLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEASSVPLAI 184
>gi|34555650|gb|AAQ74973.1| flowering time control protein isoform OsFCA-4 [Oryza sativa Indica
Group]
Length = 626
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 24 RLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI + TEDD+R F G++ E+ +KDR TGE +G +++++ + EA +A+
Sbjct: 22 KLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIRA 81
Query: 83 MNGEF-LPNHSKPIKVLIA 100
++ ++ LP PI+V A
Sbjct: 82 LHNQYTLPGAMGPIQVRYA 100
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 24 RLFILC-GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LF+ K T ++ + F+P+G+++++ +KD +S+G +++FS A A+
Sbjct: 113 KLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKD-GMRQSRGCGFVKFSSREPALAAMSA 171
Query: 83 MNGEFL 88
++G ++
Sbjct: 172 LSGNYV 177
>gi|353237193|emb|CCA69172.1| related to PUB1-major polyadenylated RNA-binding protein of nucleus
and cytoplasm [Piriformospora indica DSM 11827]
Length = 415
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 2 DRNYRIN-THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNT 59
D R+N + + D H +F+ +VT+D L + FS FG + + R + D N+
Sbjct: 55 DTEIRVNWAYQGTTNKEDTTNHYHVFVGDLSPEVTDDVLSKAFSAFGTLSDARVMWDMNS 114
Query: 60 GESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIA 100
G+S+G ++ F ++A +A+ MNGE+L S+ I+V A
Sbjct: 115 GKSRGYGFLAFRDKTDAEQAIATMNGEWL--GSRAIRVNWA 153
>gi|322795213|gb|EFZ18035.1| hypothetical protein SINV_11488 [Solenopsis invicta]
Length = 455
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 18 DEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ ++ L++ F+PFG I R V+D T +SKG A++ F K SEA
Sbjct: 163 DTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKSEA 222
Query: 77 AKAVEEMNGEFL 88
A+ MNG++L
Sbjct: 223 EAAINAMNGQWL 234
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 33/139 (23%)
Query: 17 NDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKT 73
N+ P+ + CG +T++ +++ FSPFG IQ+IR KD KG A+I+F+
Sbjct: 260 NNSKPNYEEVLYCGGFTNGITDELIKKTFSPFGTIQDIRVFKD------KGYAFIKFTTK 313
Query: 74 SEAAKAVE-----EMNGEFL---------------PNHSKPIKVLIAAKLEFKEGYRGGQ 113
A A+E E+NG + PN + + + A ++ GY GQ
Sbjct: 314 EAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQQVTAGAGQYPYGY--GQ 371
Query: 114 KISVQYTSPQSAAYARDKF 132
++S Y PQ + +F
Sbjct: 372 QMSYWY--PQGYPQMQGQF 388
>gi|10801574|dbj|BAB16700.1| TIA-1 like protein [Bombyx mori]
Length = 285
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+D+ ++N T ++ D H +F+ ++ + LR+ F+PFG I R V+D
Sbjct: 72 LDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDP 131
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
T +SKG A++ F K ++A A++ MNG++L + S
Sbjct: 132 QTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRS 166
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 16 YNDEPPHSRLFILCG----KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
YN P + + CG +TE+ ++ FS FG IQ+IR +D KG A+IRF+
Sbjct: 200 YNQSSP-TNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVFRD------KGYAFIRFT 252
Query: 72 KTSEAAKAVEEMNGEFLPNHS 92
AA A+E + + H+
Sbjct: 253 TKEAAAHAIEATHNTEISGHT 273
>gi|386766659|ref|NP_001163756.2| CG34354, isoform E [Drosophila melanogaster]
gi|386766661|ref|NP_001163755.2| CG34354, isoform D [Drosophila melanogaster]
gi|383292995|gb|ACZ95050.2| CG34354, isoform E [Drosophila melanogaster]
gi|383292996|gb|ACZ95049.2| CG34354, isoform D [Drosophila melanogaster]
Length = 431
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 17 NDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
N +P +F+ ++ L+ F+PFG I + R V+D T +SKG ++ F K SE
Sbjct: 90 NSKPEQFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSE 149
Query: 76 AAKAVEEMNGEFL 88
A A+ MNG++L
Sbjct: 150 AETAITAMNGQWL 162
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 2 DRNYRINTHDRSREYNDEPPHSRLFILCGKD-------VTEDDLRQGFSPFGNIQEIRCV 54
D N + T D YN P + + CG + E+ L++ FSP+G IQEIR
Sbjct: 182 DMNAKPLTFDEV--YNQSSP-TNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVF 238
Query: 55 KDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
KD KG A++RFS A A+ +N + + +P+K
Sbjct: 239 KD------KGYAFVRFSTKEAATHAIVAVNNTEI--NQQPVKC 273
>gi|49658982|emb|CAE01482.1| HUR [Tetraodon nigroviridis]
Length = 325
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ D+ FS FG I R + D+ TG S+GVA+IRF K +EA A+ +NG+
Sbjct: 114 KSMTQKDVEDMFSQFGRIINSRVLVDQATGVSRGVAFIRFDKRAEAEDAINNLNGQKPSE 173
Query: 91 HSKPIKVLIAA 101
+PI V AA
Sbjct: 174 AIEPITVKFAA 184
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G++ E L Q F PFG + ++ ++D NT + KG ++ S +AA A+ +
Sbjct: 245 IFIYNLGQEADETILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMSNYEDAAMAIASL 304
Query: 84 NG 85
NG
Sbjct: 305 NG 306
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++++++LR FS G ++ + ++D+ G S G ++ + S+A +A+ +NG L
Sbjct: 28 QNMSQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVNPSDAERAISTLNG--LRL 85
Query: 91 HSKPIKVLIA 100
SK IKV A
Sbjct: 86 QSKNIKVSYA 95
>gi|161078704|ref|NP_001097953.1| CG34354, isoform A [Drosophila melanogaster]
gi|158030423|gb|ABW08789.1| CG34354, isoform A [Drosophila melanogaster]
Length = 525
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 17 NDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
N +P +F+ ++ L+ F+PFG I + R V+D T +SKG ++ F K SE
Sbjct: 90 NSKPEQFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSE 149
Query: 76 AAKAVEEMNGEFL 88
A A+ MNG++L
Sbjct: 150 AETAITAMNGQWL 162
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 2 DRNYRINTHDRSREYNDEPPHSRLFILCGKD-------VTEDDLRQGFSPFGNIQEIRCV 54
D N + T D YN P + + CG + E+ L++ FSP+G IQEIR
Sbjct: 182 DMNAKPLTFDEV--YNQSSP-TNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVF 238
Query: 55 KDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
KD KG A++RFS A A+ +N + + +P+K
Sbjct: 239 KD------KGYAFVRFSTKEAATHAIVAVNNTEI--NQQPVKC 273
>gi|348509435|ref|XP_003442254.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Oreochromis niloticus]
Length = 253
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 8/110 (7%)
Query: 28 LCGKDVTED----DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+C +++ED DL++ F PFG+I I KD+NTG+SKG A+I F + +AA+A+ +
Sbjct: 13 ICVTNLSEDTGETDLQELFRPFGSISRIYLAKDKNTGQSKGFAFISFHRREDAARAIAGV 72
Query: 84 NG---EFLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARD 130
+G + L + + K L A K+E Q + Q S+A+ R+
Sbjct: 73 SGFGYDHLILNVEWAKCL-AKKVECTRQSINAQPFTNQEEHQYSSAFVRE 121
>gi|168034546|ref|XP_001769773.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678882|gb|EDQ65335.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 134
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 22 HSRLFILCGKDVTEDD--LRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
S+LFI G D+ LR FS FG + E++ + DR+TG S+G ++ F+ EA A
Sbjct: 44 SSKLFIGAGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEVA 103
Query: 80 VEEMNGEFLPNH 91
++EM+G L
Sbjct: 104 LQEMDGRELAGR 115
>gi|327263685|ref|XP_003216648.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Anolis carolinensis]
Length = 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 164 KTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPG 223
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 224 ATEPITVKFA 233
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 317 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 370
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNT-GESKGVAYIRFSKTSEAAKAVEEMNGEFLP 89
+++T+++L+ F G I+ + V+D+ T G+S G ++ + +A KA+ +NG L
Sbjct: 77 QNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLGYGFVNYIDPKDAEKAINTLNGLRL- 135
Query: 90 NHSKPIKV 97
+K IKV
Sbjct: 136 -QTKTIKV 142
>gi|294868388|ref|XP_002765513.1| CUG triplet repeat RNA-binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239865556|gb|EEQ98230.1| CUG triplet repeat RNA-binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 403
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 20 PPHSRLFILCGKDV-TEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
P + +FI D TE DLRQ F FGNI + V D+ TG S+G +I + A +
Sbjct: 304 PAGANIFIFSVPDAWTEMDLRQHFGSFGNIVSAKVVVDKQTGISRGYGFISYDNCDSAER 363
Query: 79 AVEEMNGEFLPNHSKPIKVLI 99
AV+ M+G P K IKV I
Sbjct: 364 AVQTMDGYMAPTGRK-IKVQI 383
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%)
Query: 45 FGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIA 100
+G I+E+ +KDR T ES+G+A++RF +E A+ +NG LP ++P+ V+ A
Sbjct: 40 YGGIEEVFIMKDRETQESRGLAFVRFRDLAEGQNAIAALNGAILPESARPLTVIYA 95
>gi|213625406|gb|AAI70539.1| Xel-1 protein [Xenopus laevis]
Length = 388
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 161 KTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPG 220
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 221 ATEPITVKFA 230
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 315 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 368
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 7 INTHDRSREYNDEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGV 65
IN N E + L + +++T+++L+ F G I+ + V+D+ TG+S G
Sbjct: 50 INCSSPVESNNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 109
Query: 66 AYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
++ + +A KA+ +NG L +K IKV
Sbjct: 110 GFVNYIDPKDAEKAINTLNGLRL--QTKTIKV 139
>gi|115477903|ref|NP_001062547.1| Os08g0567200 [Oryza sativa Japonica Group]
gi|42409101|dbj|BAD10352.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|46804978|dbj|BAD17833.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113624516|dbj|BAF24461.1| Os08g0567200 [Oryza sativa Japonica Group]
gi|218201630|gb|EEC84057.1| hypothetical protein OsI_30332 [Oryza sativa Indica Group]
gi|222641035|gb|EEE69167.1| hypothetical protein OsJ_28330 [Oryza sativa Japonica Group]
Length = 235
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 7/77 (9%)
Query: 24 RLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
RLF CG +V +D L + FS F + R V+D+ TG++KG ++ FS ++ A A+
Sbjct: 128 RLF--CGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGAI 185
Query: 81 EEMNGEFLPNHSKPIKV 97
+EMNG+++ N +PIK+
Sbjct: 186 KEMNGKYVGN--RPIKL 200
>gi|395841399|ref|XP_003793527.1| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40,
partial [Otolemur garnettii]
Length = 480
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 166 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 222
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 23 SRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
S + CG +TE +RQ FSPFG I EIR D KG +++RF+ AA A
Sbjct: 306 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHA 359
Query: 80 VEEMNGEFLPNH 91
+ +NG + H
Sbjct: 360 IVSVNGTTIEGH 371
>gi|226528044|dbj|BAH56564.1| TIA-1-related RNA binding protein [Spodoptera litura]
Length = 388
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+D+ ++N T ++ D H +F+ ++ LR F+PFG I R V+D
Sbjct: 72 LDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDP 131
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
T +SKG A++ F K ++A A++ MNG++L
Sbjct: 132 QTLKSKGYAFVSFVKKADAEAAIQAMNGQWL 162
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 16 YNDEPPHSRLFILCG----KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
YN P + + CG +TED ++ FS FG IQ++R +D KG A+IRF+
Sbjct: 199 YNQSSP-TNTTVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVFRD------KGYAFIRFT 251
Query: 72 KTSEAAKAVEEMNGEFLPNH 91
AA A+E + + H
Sbjct: 252 TKEAAAHAIEATHNTEISGH 271
>gi|449514035|ref|XP_002190678.2| PREDICTED: ELAV-like protein 2-like [Taeniopygia guttata]
Length = 380
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G+I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 162 KTMTQTELEQLFSQYGHIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPG 221
Query: 91 HSKPIKVLIA 100
++P+ V A
Sbjct: 222 ATEPVTVKFA 231
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 307 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 360
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG S G ++ + +A KAV +NG L
Sbjct: 76 QNMTQEELKSLFGSIGEIESCKLVRDKITGPSLGYGFVNYVDPKDAKKAVNTLNGFRL-- 133
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 134 QTKTIKV 140
>gi|403169799|ref|XP_003329214.2| hypothetical protein PGTG_10266 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168425|gb|EFP84795.2| hypothetical protein PGTG_10266 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 804
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 67/144 (46%), Gaps = 27/144 (18%)
Query: 35 EDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKP 94
++ L+ F+PFG I + +KD G SKG ++ FS EA KAV EMNG+ L SKP
Sbjct: 470 DEKLQNEFTPFGTITSCKVMKDEK-GTSKGFGFVCFSSPDEATKAVAEMNGKML--GSKP 526
Query: 95 IKVLIAAK-------LEFKEGYRG---GQKISVQ------YTSPQ-------SAAYARDK 131
+ V +A + LE + R Q+I+ Y +P +AAY
Sbjct: 527 LYVSLAQRKEVRKQQLEAQMSQRSQMRSQQIAAAGIPGAPYGAPPNPMYFGGAAAYPPHG 586
Query: 132 FHGFAYPP-GIPMVVVPDFSYGLP 154
G YPP G+P + P Y P
Sbjct: 587 GRGMMYPPNGMPAGMPPRPRYAPP 610
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 21 PHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
P++ L++ VTE L + FS G + IR +D T S G AY+ + ++A +A
Sbjct: 171 PNTSLYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADAERA 230
Query: 80 VEEMNGEFLPN 90
+E++N + N
Sbjct: 231 LEQLNYSLIKN 241
>gi|148235423|ref|NP_001081035.1| ELAV-like protein 2 [Xenopus laevis]
gi|288561905|sp|Q91903.2|ELAV2_XENLA RecName: Full=ELAV-like protein 2; AltName: Full=Elav like-1;
Short=Xel-1; AltName: Full=Protein ElrB; AltName:
Full=p45
gi|608539|gb|AAA96943.1| ribonucleoprotein [Xenopus laevis]
Length = 389
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 162 KTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPG 221
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 222 ATEPITVKFA 231
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 316 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 369
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 7 INTHDRSREYNDEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNT-GESKG 64
IN N E + L + +++T+++L+ F G I+ + V+D+ T G+S G
Sbjct: 50 INCSSPVESNNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLG 109
Query: 65 VAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
++ + +A KA+ +NG L +K IKV
Sbjct: 110 YGFVNYIDPKDAEKAINTLNGLRL--QTKTIKV 140
>gi|225681154|gb|EEH19438.1| RNA-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 442
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G +VT+D L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 288 DPAHFRLFVGNLAG-EVTDDSLLKAFSKYPSVQKARVIRDKRTEKSKGYGFVSFSDGEDY 346
Query: 77 AKAVEEMNGEFLPNH 91
+A EM G+++ +H
Sbjct: 347 FRAAREMQGKYIGSH 361
>gi|170284570|gb|AAI61141.1| rbm23 protein [Xenopus (Silurana) tropicalis]
Length = 272
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ +K+ +TG SKG +I F+ A +A+E++NG L
Sbjct: 109 NITEDMLRGIFEPFGKIENIQLLKEPDTGRSKGFGFITFTDAECARRALEQLNGFELAG- 167
Query: 92 SKPIKV 97
+P+KV
Sbjct: 168 -RPMKV 172
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F A+
Sbjct: 17 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCDIQSVPLAI 60
>gi|443724444|gb|ELU12456.1| hypothetical protein CAPTEDRAFT_172701 [Capitella teleta]
Length = 359
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++T+ DL F+ GNI R + D+NTG SKGV +IRF + EA +A++ +NG
Sbjct: 123 KNMTQVDLENMFNHCGNIITSRILCDQNTGISKGVGFIRFDQRHEAERAIKMLNGTIPEG 182
Query: 91 HSKPIKVLIA 100
+ PI V A
Sbjct: 183 ATDPITVKFA 192
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+DD+R FS G ++ + ++D+ TG+S G ++ + + +A+KA+ +NG L N
Sbjct: 37 QSMTQDDIRSLFSSIGEVESCKLIRDKATGQSLGYGFVNYKRQEDASKAITSLNGLRLQN 96
Query: 91 HSKPIKVLIA 100
K IKV +A
Sbjct: 97 --KTIKVSVA 104
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
+ E+ L Q F PFG +Q ++ V+D T + KG ++ + EA A+ +NG
Sbjct: 288 ETEENVLWQLFGPFGAVQNVKVVRDYATLKCKGFGFVTMTNYEEALMAIHALNG 341
>gi|34555648|gb|AAQ74972.1| flowering time control protein isoform OsFCA-2 [Oryza sativa Indica
Group]
Length = 649
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 24 RLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI + TEDD+R F G++ E+ +KDR TGE +G +++++ + EA +A+
Sbjct: 123 KLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIRA 182
Query: 83 MNGEF-LPNHSKPIKVLIA 100
++ ++ LP PI+V A
Sbjct: 183 LHNQYTLPGAMGPIQVRYA 201
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 24 RLFILC-GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LF+ K T ++ + F+P+G+++++ +KD +S+G +++FS A A+
Sbjct: 214 KLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKD-GMRQSRGCGFVKFSSREPALAAMSA 272
Query: 83 MNGEFL 88
++G ++
Sbjct: 273 LSGNYV 278
>gi|395819370|ref|XP_003783066.1| PREDICTED: ELAV-like protein 2 [Otolemur garnettii]
Length = 388
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 163 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 222
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 223 ATEPITVKFA 232
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 77 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 134
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 135 QTKTIKV 141
>gi|348504908|ref|XP_003440003.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Oreochromis
niloticus]
Length = 361
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +++ D+ FS +G I R + D+ +G S+GVA+IRF K +EA AV+ +NG P
Sbjct: 152 RTLSQQDVEDMFSHYGRIINSRVLVDQASGLSRGVAFIRFDKRAEADDAVKHLNGHTPPG 211
Query: 91 HSKPIKVLIAA 101
++PI V AA
Sbjct: 212 SAEPITVKFAA 222
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G++ E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 281 IFIYNLGQEADEAMLWQMFGPFGAVLNVKVIRDFNTNKCKGFGFVTMANYEEAAMAIHSL 340
Query: 84 NG 85
NG
Sbjct: 341 NG 342
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 18 DEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
DE + L + + +++D+LR FS G ++ + ++D+ G S G ++ F S+A
Sbjct: 52 DEDARTNLIVNYLPQSMSQDELRSLFSSVGEVESAKLIRDKVAGHSLGYGFVNFVNPSDA 111
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A+ +NG L SK IKV A
Sbjct: 112 ERAISTLNG--LRLQSKTIKVSFA 133
>gi|328715704|ref|XP_001946343.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1
[Acyrthosiphon pisum]
Length = 419
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 18 DEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ ++ LR+ F+PFG I + R V+D T +SKG ++ F K +EA
Sbjct: 90 DTSKHHHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKAEA 149
Query: 77 AKAVEEMNGEFL 88
A+ MNG++L
Sbjct: 150 ESAIAAMNGQWL 161
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 2 DRNYRINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
D N + T D YN P + + CG +T++ +++ F+PFGNIQEIR KD
Sbjct: 181 DSNTKPLTFDEV--YNQSSP-TNCTVYCGGLTSGLTDELVQKTFAPFGNIQEIRVFKD-- 235
Query: 59 TGESKGVAYIRFSKTSEAAKAV-----EEMNGE 86
KG A++RF+ A A+ ++NG+
Sbjct: 236 ----KGYAFVRFATKESATHAIVAVHNSDINGQ 264
>gi|169853086|ref|XP_001833224.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|116505602|gb|EAU88497.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 681
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DV +D LR F PFG I + ++D G+SKG ++ FS EA KAV EMN + +
Sbjct: 343 DVDDDKLRAEFEPFGTITSCKVMRDEK-GQSKGFGFVCFSSPDEATKAVAEMNNKMI--G 399
Query: 92 SKPIKVLIAAKLEFK 106
+KP+ V +A + E +
Sbjct: 400 TKPLYVSLAQRREVR 414
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMN 84
+VT+D+ + F +GN+ D G+SKG ++ F EA KAV+E+N
Sbjct: 240 EVTQDEFIELFKKYGNVTSAVISVDEE-GKSKGFGFVNFETHDEAQKAVDELN 291
>gi|449266192|gb|EMC77278.1| ELAV-like protein 2 [Columba livia]
Length = 388
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P+
Sbjct: 162 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPS 221
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 222 AAEPITVKFA 231
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 315 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 368
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 76 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDAEKAINTLNGLRL-- 133
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 134 QTKTIKV 140
>gi|357625522|gb|EHJ75940.1| hypothetical protein KGM_20346 [Danaus plexippus]
Length = 245
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 17 NDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
N++ H +F+ ++ +LR F+PFG I + R V+D T +SKG ++ F K SE
Sbjct: 48 NNKLEHYHIFVGDLSPEIETQNLRDAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKSE 107
Query: 76 AAKAVEEMNGEFL 88
A A+ MNG++L
Sbjct: 108 AESAITAMNGQWL 120
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 10/68 (14%)
Query: 16 YNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
YN P + + CG +TE+ +++ F PFG IQEIR KD KG A+IRFS
Sbjct: 152 YNQSSP-TNCTVYCGGLTAGLTEELMQKTFQPFGTIQEIRVFKD------KGYAFIRFST 204
Query: 73 TSEAAKAV 80
A A+
Sbjct: 205 KESATHAI 212
>gi|344298617|ref|XP_003420988.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Loxodonta
africana]
Length = 416
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I +I KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 242 NITEDMLRGIFEPFGKIDDILLTKDSDTGHSKGYGFITFSDSECARRALEQLNGFELAG- 300
Query: 92 SKPIKV 97
+P++V
Sbjct: 301 -RPMRV 305
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
DL FS G ++++R + DRN+ SKG+AY+ F + A+ + G++L
Sbjct: 150 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQWL 200
>gi|221044666|dbj|BAH14010.1| unnamed protein product [Homo sapiens]
Length = 270
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 103 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFEL--A 160
Query: 92 SKPIKV 97
+P++V
Sbjct: 161 GRPMRV 166
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 11 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 54
>gi|148236291|ref|NP_001081613.1| ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B)
[Xenopus laevis]
gi|728726|emb|CAA59430.1| Xel-1 [Xenopus laevis]
Length = 389
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 162 KTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPG 221
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 222 ATEPITVKFA 231
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 316 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 369
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 7 INTHDRSREYNDEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNT-GESKG 64
IN N E + L + +++T+++L+ F G I+ + V+D+ T G+S G
Sbjct: 50 INCSSPVESNNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLG 109
Query: 65 VAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
++ + +A KA+ +NG L +K IKV
Sbjct: 110 YGFVNYIDPKDAEKAINTVNGLRL--QTKTIKV 140
>gi|18411454|ref|NP_567192.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|79324963|ref|NP_001031566.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|13605916|gb|AAK32943.1|AF367357_1 AT4g00830/A_TM018A10_14 [Arabidopsis thaliana]
gi|21360555|gb|AAM47474.1| AT4g00830/A_TM018A10_14 [Arabidopsis thaliana]
gi|110743368|dbj|BAE99571.1| hypothetical protein [Arabidopsis thaliana]
gi|332656540|gb|AEE81940.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332656541|gb|AEE81941.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 495
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
Query: 20 PPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PPH + G +DV E+DLR G I E+R +KDR++G+SKG A++ F A
Sbjct: 112 PPHGSEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQ 171
Query: 78 KAVEEMNGEFLPNHSKPIK 96
KA+EE+ HSK K
Sbjct: 172 KAIEEL-------HSKEFK 183
>gi|304798|gb|AAA28828.1| polyadenylate-binding protein [Drosophila melanogaster]
gi|304800|gb|AAA02941.1| polyadenylate-binding protein [Drosophila melanogaster]
Length = 465
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 22 HSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
H +F+ ++ + LR+ F+PFG I R V+D +T +SKG A++ F K +EA A+
Sbjct: 94 HHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAI 153
Query: 81 EEMNGEFLPNHS 92
+ MN +++ + S
Sbjct: 154 QAMNRQWIASRS 165
>gi|449470234|ref|XP_004152823.1| PREDICTED: uncharacterized protein LOC101207945 [Cucumis sativus]
Length = 253
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 19 EPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
E P + + CG +V +D L + FS F + R V+D+ TG++KG ++ FS ++
Sbjct: 139 EWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTD 198
Query: 76 AAKAVEEMNGEFLPNHSKPIKV 97
A A++EMNG+++ N +PIK+
Sbjct: 199 LAGALKEMNGKYVGN--RPIKL 218
>gi|348504910|ref|XP_003440004.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Oreochromis
niloticus]
Length = 369
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +++ D+ FS +G I R + D+ +G S+GVA+IRF K +EA AV+ +NG P
Sbjct: 160 RTLSQQDVEDMFSHYGRIINSRVLVDQASGLSRGVAFIRFDKRAEADDAVKHLNGHTPPG 219
Query: 91 HSKPIKVLIAA 101
++PI V AA
Sbjct: 220 SAEPITVKFAA 230
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 25 LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+FI G++ E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +
Sbjct: 289 IFIYNLGQEADEAMLWQMFGPFGAVLNVKVIRDFNTNKCKGFGFVTMANYEEAAMAIHSL 348
Query: 84 NG 85
NG
Sbjct: 349 NG 350
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 18 DEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKD--------RNTGESKGVAYI 68
DE + L + + +++D+LR FS G ++ + ++D +N S G ++
Sbjct: 52 DEDARTNLIVNYLPQSMSQDELRSLFSSVGEVESAKLIRDKVAGNDETKNESHSLGYGFV 111
Query: 69 RFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIA 100
F S+A +A+ +NG L SK IKV A
Sbjct: 112 NFVNPSDAERAISTLNG--LRLQSKTIKVSFA 141
>gi|89266927|emb|CAJ82281.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Xenopus (Silurana) tropicalis]
Length = 374
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 162 KTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPG 221
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 222 ATEPITVKFA 231
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 301 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 354
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 76 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 133
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 134 QTKTIKV 140
>gi|296484904|tpg|DAA27019.1| TPA: ELAV-like 2-like [Bos taurus]
Length = 620
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 408 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 467
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 468 ATEPITVKFA 477
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 547 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 600
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 322 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 379
Query: 91 HSKPIKVLIA 100
+K IKV A
Sbjct: 380 QTKTIKVSYA 389
>gi|344298615|ref|XP_003420987.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Loxodonta
africana]
Length = 450
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I +I KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 276 NITEDMLRGIFEPFGKIDDILLTKDSDTGHSKGYGFITFSDSECARRALEQLNGFELAG- 334
Query: 92 SKPIKV 97
+P++V
Sbjct: 335 -RPMRV 339
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
DL FS G ++++R + DRN+ SKG+AY+ F + A+ + G++L
Sbjct: 184 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQWL 234
>gi|344298613|ref|XP_003420986.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Loxodonta
africana]
Length = 434
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I +I KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 260 NITEDMLRGIFEPFGKIDDILLTKDSDTGHSKGYGFITFSDSECARRALEQLNGFELAG- 318
Query: 92 SKPIKV 97
+P++V
Sbjct: 319 -RPMRV 323
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
DL FS G ++++R + DRN+ SKG+AY+ F + A+ + G++L
Sbjct: 168 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQWL 218
>gi|349732184|ref|NP_001025498.3| ELAV-like protein 2 [Xenopus (Silurana) tropicalis]
gi|288561906|sp|Q28GD4.2|ELAV2_XENTR RecName: Full=ELAV-like protein 2; AltName: Full=Protein ElrB
Length = 375
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 162 KTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPG 221
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 222 ATEPITVKFA 231
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 302 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 355
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 76 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 133
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 134 QTKTIKV 140
>gi|260787640|ref|XP_002588860.1| hypothetical protein BRAFLDRAFT_89423 [Branchiostoma floridae]
gi|229274031|gb|EEN44871.1| hypothetical protein BRAFLDRAFT_89423 [Branchiostoma floridae]
Length = 204
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 1 MDRNYRINTHDRSREYNDEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNT 59
+D+ NT + D +LF+ + GK TE+D+R+ F PFG I+E ++ +
Sbjct: 12 LDKVIEGNTMRHAERVEDR----KLFVGMLGKQQTEEDVRRLFDPFGTIEECTILRGPD- 66
Query: 60 GESKGVAYIRFSKTSEAAKAVEEMNG-EFLPNHSKPIKVLIA 100
G+SKG A+++FS +EA A+ ++G + +P S I V A
Sbjct: 67 GQSKGCAFVKFSSHAEAQAAINNLHGSQTMPGASSSIVVKFA 108
>gi|449454734|ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 404
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 11/132 (8%)
Query: 3 RNYRINTHDRSREYNDEPPHSRLFI--LCGKDVTEDDLRQGF-SPFGNIQEIRCVKDRNT 59
+N+R+N + D+ P +F+ L G DVT+ L++ F + + +++ + V DR T
Sbjct: 137 QNFRLNWASAGEKRQDDSPDYTIFVGDLAG-DVTDYVLQETFRARYNSVKGAKVVIDRLT 195
Query: 60 GESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIAAKLEFKEGYRGGQKIS-VQ 118
G +KG +++F SE +A+ EMNG S+P+++ AA + GGQ+ S
Sbjct: 196 GRTKGYGFVKFGDESEQMRAMTEMNGVHC--SSRPMRIGPAA----NKNTSGGQQFSKTS 249
Query: 119 YTSPQSAAYARD 130
Y +PQ A D
Sbjct: 250 YQNPQGAQNEND 261
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 37/66 (56%)
Query: 42 FSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIAA 101
F+ G + ++ ++++ TG+S+G +I F A + ++ NG +PN ++ ++ A+
Sbjct: 86 FAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWAS 145
Query: 102 KLEFKE 107
E ++
Sbjct: 146 AGEKRQ 151
>gi|340905400|gb|EGS17768.1| putative polyadenylated RNA protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 485
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG+I E R + D TG S
Sbjct: 164 RVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLWQAFSAFGSISEARVMWDMKTGRS 223
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + ++A KA+ M+GE+L
Sbjct: 224 RGYGFVAFRERADAEKALSSMDGEWL 249
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
P+ R + G D VTED LRQ F G++Q ++ + D+N ++ + A +
Sbjct: 90 PNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKNH-RGYNYGFVEYDDPGAAER 148
Query: 79 AVEEMNGEFLPNHSKPIKVLIA 100
A++ +NG + H I+V A
Sbjct: 149 AMQTLNGRRV--HQNEIRVNWA 168
>gi|291245050|ref|XP_002742404.1| PREDICTED: MGC81970 protein-like isoform 1 [Saccoglossus
kowalevskii]
Length = 556
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TE+ LR F PFG I I+ +KD TG SKG +I F +A KA+E++NG L
Sbjct: 266 NITEEMLRGIFEPFGKIDNIQLMKDNETGRSKGYGFITFHDAEDAKKALEQLNGFEL--A 323
Query: 92 SKPIKV 97
+P+KV
Sbjct: 324 GRPMKV 329
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 18 DEPPHSR--LFILC---GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
D PP R + C + + D+ + FS G ++++R + DRN+ SKG+AY+ F
Sbjct: 150 DLPPEERDARTVFCWQLSQKIRPRDMEEFFSSVGIVRDVRLISDRNSRRSKGIAYVEFQD 209
Query: 73 TSEAAKAV 80
+ A+
Sbjct: 210 KNSVPLAL 217
>gi|357150232|ref|XP_003575388.1| PREDICTED: uncharacterized protein LOC100836790 [Brachypodium
distachyon]
Length = 239
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 21 PHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
P + + CG +V +D L + FS + + R ++D++TG++KG ++ F+ S+ A
Sbjct: 127 PENDFRLFCGDLGNEVNDDVLTKAFSKYPSFNMARVIRDKSTGKTKGYGFVSFANASDLA 186
Query: 78 KAVEEMNGEFLPNHSKPIKV 97
A++EMNG+++ N +PIK+
Sbjct: 187 AALKEMNGKYVGN--RPIKL 204
>gi|347964852|ref|XP_309157.5| AGAP000965-PA [Anopheles gambiae str. PEST]
gi|333466508|gb|EAA04954.5| AGAP000965-PA [Anopheles gambiae str. PEST]
Length = 340
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ DL F+ +G I R + D TG SKGV +IRF + SEA +A++++NG
Sbjct: 122 KSMTQQDLENLFNAYGQIITSRILCDNITGLSKGVGFIRFDQRSEAERAIQQLNGTTPKG 181
Query: 91 HSKPIKVLIA 100
S+PI V A
Sbjct: 182 ASEPITVKFA 191
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ +KD T + KG ++ + EA AV+ +NG L N
Sbjct: 265 ETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTNYDEAVVAVQSLNGYTLGN 323
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+++++ FS G+++ + ++D+ TG+S G ++ + + +A KA+ NG L N
Sbjct: 36 QTMTQEEVKSLFSSIGDVESCKLIRDKVTGQSLGYGFVNYHRPEDAEKAINTFNGLRLQN 95
Query: 91 HSKPIKVLIA 100
K IKV A
Sbjct: 96 --KTIKVSFA 103
>gi|449477710|ref|XP_004155100.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101207945
[Cucumis sativus]
Length = 253
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 19 EPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
E P + + CG +V +D L + FS F + R V+D+ TG++KG ++ FS ++
Sbjct: 139 EWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTD 198
Query: 76 AAKAVEEMNGEFLPNHSKPIKV 97
A A++EMNG+++ N +PIK+
Sbjct: 199 LAGALKEMNGKYVGN--RPIKL 218
>gi|340914672|gb|EGS18013.1| hypothetical protein CTHT_0060260 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 397
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G + T++ L + FS + ++Q+ + ++D+ T +SKG ++ FS +
Sbjct: 247 DPSHFRLFVGNLAG-ETTDESLLKAFSRWKSVQKAKVIRDKRTNKSKGFGFVSFSDPDDF 305
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAAKLEFK 106
+A +EMNG+++ +H P+ V+ AK E K
Sbjct: 306 FQAAKEMNGKYIQSH--PV-VVKKAKTEIK 332
>gi|225439737|ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|297741476|emb|CBI32608.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 16 YNDEPPHSRLFILCGKDVTEDD-LRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTS 74
+N +LF+ +T D+ L++ FSPFG + E + + DR +G SKG ++ ++
Sbjct: 27 FNSTVTSPKLFVSGLSRLTTDEKLKEAFSPFGQLLEAKVITDRVSGRSKGFGFVTYTTLE 86
Query: 75 EAAKAVEEMNGEFL 88
EA KA E MN +FL
Sbjct: 87 EAEKAREGMNAKFL 100
>gi|126334000|ref|XP_001364864.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Monodelphis
domestica]
Length = 360
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 287 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 340
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|62088002|dbj|BAD92448.1| TIA1 protein variant [Homo sapiens]
Length = 464
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 154 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 210
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 23 SRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
S + CG +TE +RQ FSPFG I EIR D KG +++RF+ AA A
Sbjct: 291 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHA 344
Query: 80 VEEMNGEFLPNH 91
+ +NG + H
Sbjct: 345 IVSVNGTTIEGH 356
>gi|403370032|gb|EJY84876.1| RNA-binding protein [Oxytricha trifallax]
Length = 722
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 11 DRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIR 69
DRS +YN E P + ++I + V E DL + F +G I E++ ++D T SKG AY+
Sbjct: 311 DRSEKYNQENPGNNVYIAGIPRWVNESDLLKTFEKYGKILEVKVIRDHITKNSKGFAYVL 370
Query: 70 FSKTSEAAKAVEEMNG 85
+ ++S+A +A+E ++G
Sbjct: 371 YERSSDAQRAIEGLDG 386
>gi|357144466|ref|XP_003573302.1| PREDICTED: APOBEC1 complementation factor-like [Brachypodium
distachyon]
Length = 476
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 38/54 (70%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMN 84
+D TE+DLR+ P G I E+R +KD++T E+KG A++ F+ A +A+EE++
Sbjct: 120 RDTTEEDLRELCEPLGEIHEVRLMKDKDTKENKGFAFVTFTAKDVAQRAIEELH 173
>gi|301763026|ref|XP_002916933.1| PREDICTED: ELAV-like protein 2-like [Ailuropoda melanoleuca]
Length = 427
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 202 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 261
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 262 ATEPITVKFA 271
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 354 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 407
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 116 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 173
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 174 QTKTIKV 180
>gi|167521936|ref|XP_001745306.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776264|gb|EDQ89884.1| predicted protein [Monosiga brevicollis MX1]
Length = 389
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 19 EPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
+P +LFI ++ +E+DL FS FG+I E+ ++DR T SKG A++ F+ A
Sbjct: 13 DPDAMKLFIGQIPRNYSEEDLTHIFSEFGHIYEVMILRDRQTHNSKGCAFLTFTTRQAAV 72
Query: 78 KAVEEMNGE-FLPNHSKPIKVLIA 100
A+E + + LPN S P++V IA
Sbjct: 73 DAIERHHEKTTLPNMSHPMQVKIA 96
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 24 RLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LF+ + + + EDDLR F FG+++++ ++ + G SKG A+++FS EA A+
Sbjct: 106 KLFVGMLARTMNEDDLRAKFGAFGHVEDLTILRHAD-GSSKGCAFVKFSNADEAQSAIAN 164
Query: 83 M-NGEFLPNHSKPIKVLIA 100
+ + E + PI V +A
Sbjct: 165 LHHSETMDGCRSPIVVKVA 183
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 12 RSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRF 70
+S + + P S LFI ++ + L F PFGN+ + D+ TG+SK ++ +
Sbjct: 285 QSSQQPEGPDGSNLFIYHLPQEFNDQALAATFLPFGNVISAKVFVDKMTGQSKCFGFVSY 344
Query: 71 SKTSEAAKAVEEMNG 85
+ A A+ MNG
Sbjct: 345 DNPASAEAAITAMNG 359
>gi|334186262|ref|NP_001190647.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332656542|gb|AEE81942.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 467
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
Query: 20 PPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PPH + G +DV E+DLR G I E+R +KDR++G+SKG A++ F A
Sbjct: 92 PPHGSEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQ 151
Query: 78 KAVEEMNGEFLPNHSKPIK 96
KA+EE+ HSK K
Sbjct: 152 KAIEEL-------HSKEFK 163
>gi|195574479|ref|XP_002105216.1| GD21365 [Drosophila simulans]
gi|194201143|gb|EDX14719.1| GD21365 [Drosophila simulans]
Length = 363
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 17 NDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
N +P +F+ ++ L+ F+PFG I + R V+D T +SKG ++ F K SE
Sbjct: 91 NSKPEQFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSE 150
Query: 76 AAKAVEEMNGEFLPNHS 92
A A+ MNG++L + S
Sbjct: 151 AETAITAMNGQWLGSRS 167
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 2 DRNYRINTHDRSREYNDEPPHSRLFILCGKD-------VTEDDLRQGFSPFGNIQEIRCV 54
D N + T D YN P + + CG + E+ L++ FSP+G IQEIR
Sbjct: 183 DMNAKPLTFDEV--YNQSSP-TNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVF 239
Query: 55 KDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
KD KG A++RFS A A+ +N + + +P+K
Sbjct: 240 KD------KGYAFVRFSTKEAATHAIVAVNNTEI--NQQPVKC 274
>gi|432875366|ref|XP_004072806.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N + + D H +F+ ++T +D++ F+PFG I + R VKD
Sbjct: 72 MGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGRISDARVVKDMA 131
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A++ M G++L
Sbjct: 132 TGKSKGYGFVSFFNKWDAENAIQHMGGQWL 161
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 23 SRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
S + CG +TE +RQ FS FG I E+R D KG +++RF+ AA A
Sbjct: 201 SNCTVYCGGVSSGLTEQLMRQTFSAFGQIMEVRVFPD------KGYSFVRFNSHESAAHA 254
Query: 80 VEEMNGEFLPNH 91
+ +NG + H
Sbjct: 255 IVSVNGTSIDGH 266
>gi|395863338|ref|XP_003803853.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Otolemur
garnettii]
gi|395863342|ref|XP_003803855.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Otolemur
garnettii]
Length = 487
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TE LR F PFG ++ I+ +KD TG SKG +I FS + A KA+E++NG L
Sbjct: 218 NITEAMLRGIFEPFGRLESIQLMKDSETGRSKGYGFITFSDSECAKKALEQLNG--LELA 275
Query: 92 SKPIKV 97
+P+KV
Sbjct: 276 GRPMKV 281
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN SKG+AY+ F S A+
Sbjct: 126 DLEAFFSTVGKVRDVRMISDRNARRSKGIAYVEFVDVSSVPLAI 169
>gi|226292140|gb|EEH47560.1| RNP domain-containing protein [Paracoccidioides brasiliensis Pb18]
Length = 442
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G +VT+D L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 288 DPAHFRLFVGNLAG-EVTDDSLLKAFSKYPSVQKARVIRDKRTEKSKGYGFVSFSDGEDY 346
Query: 77 AKAVEEMNGEFLPNH 91
+A EM G+++ +H
Sbjct: 347 FRAAREMQGKYIGSH 361
>gi|453089427|gb|EMF17467.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 501
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 9 THDRSREYNDEPPHSRLFILCGK---DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGV 65
++DR +++ D P I CG D TED +R+ F+ GN+ IR DR+TG KG
Sbjct: 330 SNDRQQKFGDAPGEPTATIWCGNLSFDATEDVVREYFAEHGNVNSIRLPTDRDTGAPKGF 389
Query: 66 AYIRFSKTSEAAKAVEEMNGE 86
Y+ EA A + G+
Sbjct: 390 GYVEMGSVEEAQAAFNALQGQ 410
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 28/121 (23%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
+V E+ L + F FG + +R + DR++G SKG Y+ F+ +AAKA+E N L N
Sbjct: 250 NVDEEWLTREFEEFGELAGVRIITDRDSGRSKGFGYVEFTNAEDAAKALEAKNESLLDNR 309
Query: 92 SKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYA------RDKFHGFAYPPGIPMVV 145
+ I V +++P+ + A D+ F PG P
Sbjct: 310 N----------------------IRVDFSTPRDKSNAGPQQRSNDRQQKFGDAPGEPTAT 347
Query: 146 V 146
+
Sbjct: 348 I 348
>gi|119586631|gb|EAW66227.1| RNA binding motif protein 23, isoform CRA_f [Homo sapiens]
Length = 269
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 103 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFEL--A 160
Query: 92 SKPIKV 97
+P++V
Sbjct: 161 GRPMRV 166
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 11 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 54
>gi|62739311|gb|AAH94189.1| Elavl2-a protein [Xenopus laevis]
Length = 359
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 132 KTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPG 191
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 192 ATEPITVKFA 201
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 286 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 339
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 7 INTHDRSREYNDEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGV 65
IN N E + L + +++T+++L+ F G I+ + V+D+ TG+S G
Sbjct: 21 INCSSPVESNNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 80
Query: 66 AYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
++ + +A KA+ +NG L +K IKV
Sbjct: 81 GFVNYIDPKDAEKAINTLNGLRL--QTKTIKV 110
>gi|408392881|gb|EKJ72170.1| hypothetical protein FPSE_07657 [Fusarium pseudograminearum CS3096]
Length = 484
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 164 RVNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRS 223
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F EA KA+ M+GE+L
Sbjct: 224 RGYGFVAFRDRPEAEKALSSMDGEWL 249
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
P+ R + G D VTE+ LRQ F G++Q ++ + D+N ++ + A +
Sbjct: 79 PNKRALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNA-RGYNYGFVEYDDPGAAER 137
Query: 79 AVEEMNG 85
A++ +NG
Sbjct: 138 AMQTLNG 144
>gi|392869588|gb|EJB11873.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides immitis RS]
Length = 466
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 165 RVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRS 224
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + ++A KA+ M+GE+L
Sbjct: 225 RGYGFVAFRERADAEKALSSMDGEWL 250
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY--IRFSKTSEA 76
P+ R + G D VTED LRQ F G++Q ++ + D+N +SKG+ Y + + A
Sbjct: 89 PNKRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNF-QSKGLNYGFVEYDDPGAA 147
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A++ +NG + H I+V A
Sbjct: 148 ERAMQTLNGRRV--HQSEIRVNWA 169
>gi|345497985|ref|XP_001603213.2| PREDICTED: nucleolysin TIA-1 isoform p40-like [Nasonia vitripennis]
Length = 386
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 22 HSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
H +F+ ++ LR+ F+PFG I + R V+D T +SKG ++ F K +EA A+
Sbjct: 59 HYHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTMKSKGYGFVSFVKKAEAESAI 118
Query: 81 EEMNGEFL 88
MNG++L
Sbjct: 119 GAMNGQWL 126
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 10/68 (14%)
Query: 16 YNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
YN P + + CG +TE+ +++ FSPFG+IQEIR KD KG A+IRFS
Sbjct: 158 YNQSSP-TNCTVYCGGLTNGLTEELMQKTFSPFGSIQEIRVFKD------KGYAFIRFST 210
Query: 73 TSEAAKAV 80
A A+
Sbjct: 211 KESATHAI 218
>gi|324507975|gb|ADY43373.1| Nucleolysin TIAR [Ascaris suum]
Length = 290
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+DR ++N T S+ D H +FI +V L+ F+PFG + + + ++D
Sbjct: 7 LDREMKVNWATEPGSQAKVDTSKHFHVFIGDLSPEVDNKALKDAFAPFGEVSDAKVIRDS 66
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
T +SKG ++ + K EA +A+E+MNG++L
Sbjct: 67 TTLKSKGYGFVSYPKREEAERAIEQMNGQWL 97
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 20 PPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
P ++ ++I + V ++DLR F FG I E+R K ++G A++RF K A
Sbjct: 134 PDNTSVYIGNVNQSVNDEDLRAAFDKFGRIVEVRIFK------TQGFAFVRFDKKDSACN 187
Query: 79 AVEEMNG 85
A+ +MNG
Sbjct: 188 AIVKMNG 194
>gi|226529880|ref|NP_001150360.1| RNA binding protein [Zea mays]
gi|195638638|gb|ACG38787.1| RNA binding protein [Zea mays]
gi|414866145|tpg|DAA44702.1| TPA: RNA binding protein [Zea mays]
Length = 166
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 15 EYNDEPPHS--RLFILCGKDVTEDDLRQG-FSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
E + PP + LF+ +T D+ QG F+PFG + E + V DR +G SKG ++R++
Sbjct: 50 EVANVPPLTTPNLFVSGLSRLTTDEKLQGAFAPFGRLLEAKVVTDRVSGRSKGFGFVRYA 109
Query: 72 KTSEAAKAVEEMNGEFL 88
EA +A +EMN +FL
Sbjct: 110 TIEEAERARQEMNAKFL 126
>gi|46122079|ref|XP_385593.1| hypothetical protein FG05417.1 [Gibberella zeae PH-1]
Length = 473
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 153 RVNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRS 212
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F EA KA+ M+GE+L
Sbjct: 213 RGYGFVAFRDRPEAEKALSSMDGEWL 238
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
P+ R + G D VTE+ LRQ F G++Q ++ + D+N ++ + A +
Sbjct: 79 PNKRALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNA-RGYNYGFVEYDDPGAAER 137
Query: 79 AVEEMNGEFLPNHSKPIKVLIA 100
A++ +NG + H I+V A
Sbjct: 138 AMQTLNGRRV--HQSEIRVNWA 157
>gi|83643064|ref|YP_431499.1| RNA-binding protein [Hahella chejuensis KCTC 2396]
gi|83631107|gb|ABC27074.1| RNA-binding protein (RRM domain) [Hahella chejuensis KCTC 2396]
Length = 90
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
VTE++LR+ FS FG + + DRNTG+SKG A++ S SEA A++ +N L
Sbjct: 12 VTEEELREAFSSFGEVTSANLIIDRNTGQSKGFAFVEMSNNSEADAAIKGLNDTALK--G 69
Query: 93 KPIKV 97
+ IKV
Sbjct: 70 RNIKV 74
>gi|68072247|ref|XP_678037.1| RNA binding protein [Plasmodium berghei strain ANKA]
gi|56498375|emb|CAI00313.1| RNA binding protein, putative [Plasmodium berghei]
Length = 318
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 20 PPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
PP + LFI + + DL Q FSPFG + R ++NTG ++G A++ + AA
Sbjct: 174 PPGANLFIFHVPNEWQQTDLIQAFSPFGELLSARIATEKNTGRNRGFAFVSYENIESAAA 233
Query: 79 AVEEMNGEFLPNHSKPIKVLI 99
A+ +MNG N K +KV +
Sbjct: 234 AISQMNGFMALN--KKLKVTV 252
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG-EFLP 89
K++TE+ ++ FS +G+++E+ +KD +TG KG ++++F+ +A A+ +NG + L
Sbjct: 1 KNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAISSLNGKKTLE 60
Query: 90 NHSKPIKVLIA 100
++P++V A
Sbjct: 61 GCNRPVEVRFA 71
>gi|307176221|gb|EFN65860.1| Sex-lethal-like protein [Camponotus floridanus]
Length = 272
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 6/106 (5%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
+R +E + L++ +++TE + + FS +GNI + +KD+ TG +GVA++RF
Sbjct: 66 ARPSGEEIKETNLYVTNLPRNITESQIDEIFSKYGNIVQKNILKDKLTGLPRGVAFVRFD 125
Query: 72 KTSEAAKAVEEMNGEFLPNHSKPIKVLIA-----AKLEFKEGYRGG 112
K EA +A+ +++G S+P+ V IA K + G++ G
Sbjct: 126 KREEAQEAIAQLHGTIPEGGSEPLSVKIAEEHGKQKAAYYAGWQAG 171
Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+ E +L F G ++ R +KD TG S G ++ ++K +AA A+ +NG L +
Sbjct: 1 MNEKELYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAISTLNG--LQVQN 58
Query: 93 KPIKVLIA 100
K +KV A
Sbjct: 59 KRLKVSFA 66
>gi|428672327|gb|EKX73241.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 511
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 38/53 (71%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
+ E +L+Q FSPFG I ++ +D TGESKG A+++F ++SEA +A+ MNG
Sbjct: 287 LNEVELKQLFSPFGTIIDVEIFRDPETGESKGYAFLKFRRSSEAKEAMNTMNG 339
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 25 LFILCGKDVTEDDLRQGFSPF-GNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
L I E D+ + FS G +++I+CV+D +G+SKG+AY+ F KA+
Sbjct: 174 LVINLSLSADERDIYELFSEHAGKVRDIQCVRDLRSGKSKGIAYVEFYTQESVIKAL 230
>gi|258570067|ref|XP_002543837.1| OsGRP2 protein [Uncinocarpus reesii 1704]
gi|237904107|gb|EEP78508.1| OsGRP2 protein [Uncinocarpus reesii 1704]
Length = 370
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 70 RVNWAYQSNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRS 129
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + ++A KA+ M+GE+L
Sbjct: 130 RGYGFVAFRERADAEKALSSMDGEWL 155
>gi|225443254|ref|XP_002272469.1| PREDICTED: CUGBP Elav-like family member 5 [Vitis vinifera]
Length = 257
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 21 PHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
P + + CG +V +D L + FS F + R V+D+ TG+++G ++ FS S+ A
Sbjct: 145 PENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTRGFGFVSFSNPSDLA 204
Query: 78 KAVEEMNGEFLPNHSKPIKV 97
A++EMNG+++ N +PIK+
Sbjct: 205 AALKEMNGKYVGN--RPIKL 222
>gi|126334002|ref|XP_001364932.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Monodelphis
domestica]
Length = 347
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 274 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 327
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|70991693|ref|XP_750695.1| RNP domain protein [Aspergillus fumigatus Af293]
gi|66848328|gb|EAL88657.1| RNP domain protein [Aspergillus fumigatus Af293]
Length = 370
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G +VT+D L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 242 DPAHFRLFVGNLAG-EVTDDSLLKAFSRYSSVQKARVIRDKRTQKSKGYGFVSFSNGDDY 300
Query: 77 AKAVEEMNGEFLPNH 91
A EM G+++ +H
Sbjct: 301 FAAAREMQGKYIGSH 315
>gi|432906488|ref|XP_004077556.1| PREDICTED: nucleolysin TIAR-like [Oryzias latipes]
Length = 382
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ D++ +D+R F+PFG I + R VKD TG+SKG ++ F
Sbjct: 86 SSQKKDTSNHFHVFVGDLNPDISTEDVRAAFTPFGKISDARVVKDLTTGKSKGYGFVSFY 145
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 146 NKLDAENAIVHMAGQWL 162
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +++E +RQ FSPFG I EIR + KG ++IRFS AA A+ +
Sbjct: 206 VYCGGIQSELSEHLMRQTFSPFGQIMEIRVFPE------KGYSFIRFSSHDSAAHAIVSV 259
Query: 84 NGEFLPNHS 92
NG + H+
Sbjct: 260 NGTSIEGHA 268
>gi|357612395|gb|EHJ67964.1| putative RNA-binding region-containing protein [Danaus plexippus]
Length = 536
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I+ + D +TG+SKG ++ F ++A KA+E++NG L
Sbjct: 290 NITEDMLRGIFEPFGKIDHIQLMTDPDTGKSKGYGFLTFHHATDAKKAMEQLNGFELA-- 347
Query: 92 SKPIKV 97
+P+KV
Sbjct: 348 GRPMKV 353
>gi|281349018|gb|EFB24602.1| hypothetical protein PANDA_005072 [Ailuropoda melanoleuca]
gi|351703220|gb|EHB06139.1| ELAV-like protein 2 [Heterocephalus glaber]
gi|355567720|gb|EHH24061.1| Hu-antigen B [Macaca mulatta]
gi|355753294|gb|EHH57340.1| Hu-antigen B [Macaca fascicularis]
gi|431914785|gb|ELK15810.1| ELAV-like protein 2 [Pteropus alecto]
Length = 387
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 162 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 221
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 222 ATEPITVKFA 231
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 314 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 367
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 76 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 133
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 134 QTKTIKV 140
>gi|348041233|ref|NP_775431.2| ELAV-like protein 2 [Rattus norvegicus]
gi|149044491|gb|EDL97750.1| rCG53485, isoform CRA_b [Rattus norvegicus]
Length = 388
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 163 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 222
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 223 ATEPITVKFA 232
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 315 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 368
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 77 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 134
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 135 QTKTIKV 141
>gi|444729824|gb|ELW70227.1| ELAV-like protein 2 [Tupaia chinensis]
Length = 353
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 127 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 186
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 187 ATEPITVKFA 196
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 280 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 333
>gi|159164266|pdb|2DNZ|A Chain A, Solution Structure Of The Second Rna Binding Domain Of
Rna Binding Motif Protein 23
Length = 95
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 16 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 74
Query: 92 SKPIKV 97
+P++V
Sbjct: 75 -RPMRV 79
>gi|119193550|ref|XP_001247381.1| hypothetical protein CIMG_01152 [Coccidioides immitis RS]
gi|392863377|gb|EAS35881.2| RNA-binding protein [Coccidioides immitis RS]
Length = 252
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 19 EPPHSRLFILCGK---DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
+P H RLF CG +VT+D L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 112 DPAHFRLF--CGNLAGEVTDDSLLKAFSKYPSVQKARVIRDKRTEKSKGYGFVSFSDGED 169
Query: 76 AAKAVEEMNGEFLPNH 91
+A EM G+++ +H
Sbjct: 170 YFRAAREMQGKYIGSH 185
>gi|440909067|gb|ELR59018.1| ELAV-like protein 2 [Bos grunniens mutus]
Length = 388
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 162 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 221
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 222 ATEPITVKFA 231
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 315 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 368
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 76 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 133
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 134 QTKTIKV 140
>gi|363744745|ref|XP_003643117.1| PREDICTED: ELAV-like protein 2 isoform 2 [Gallus gallus]
Length = 366
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 141 KTMTQKELEQLFSQYGRIITSRILVDQVTGMSRGVGFIRFDKRIEAEEAIKGLNGQKPPA 200
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 201 ATEPITVKFA 210
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 293 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 346
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 55 QSMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDAEKAINTLNGLRL-- 112
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 113 QTKTIKV 119
>gi|82802751|gb|ABB92426.1| PABP3 [Pan troglodytes]
Length = 632
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
D+ ++ L++ FSPFG I + + + G SKG ++ FS EA KAV EMNG +
Sbjct: 304 DIDDERLQKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIV--A 359
Query: 92 SKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPGIPMVVVP 147
+KP+ V +A + E ++ Y ++ +Y Q A R + A P G M VP
Sbjct: 360 TKPLYVALAQRKEERQAY-----LTNEYM--QRMASVRAVPNQRAPPSGYFMTAVP 408
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
G+D+ ++ L+ F FG ++ + D +G+SKG ++ F + +A KAV+EMNG+ L
Sbjct: 199 GEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKEL 256
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DVTE L + FSP G I IR +D T S AY+ F +A A++ MN + +
Sbjct: 21 DVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALDTMNFDVI--K 78
Query: 92 SKPIKVLIAAK 102
KP++++ + +
Sbjct: 79 GKPLRIMWSQR 89
>gi|355778434|gb|EHH63470.1| hypothetical protein EGM_16442, partial [Macaca fascicularis]
Length = 366
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 198 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 256
Query: 92 SKPIKV 97
+P++V
Sbjct: 257 -RPMRV 261
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 106 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 149
>gi|207080284|ref|NP_001128867.1| DKFZP459N111 protein [Pongo abelii]
gi|390458025|ref|XP_003732040.1| PREDICTED: ELAV-like protein 2 [Callithrix jacchus]
gi|402897269|ref|XP_003911691.1| PREDICTED: ELAV-like protein 2 isoform 5 [Papio anubis]
gi|403272644|ref|XP_003928162.1| PREDICTED: ELAV-like protein 2 isoform 4 [Saimiri boliviensis
boliviensis]
gi|426361469|ref|XP_004047933.1| PREDICTED: ELAV-like protein 2 isoform 5 [Gorilla gorilla gorilla]
gi|55731642|emb|CAH92527.1| hypothetical protein [Pongo abelii]
Length = 389
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 163 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 222
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 223 ATEPITVKFA 232
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 316 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 369
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 77 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 134
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 135 QTKTIKV 141
>gi|348507121|ref|XP_003441105.1| PREDICTED: nucleolysin TIAR [Oreochromis niloticus]
Length = 382
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D+R F+PFG I + R VKD TG+SKG ++ F
Sbjct: 86 SSQKKDTSNHFHVFVGDLNPEITTEDVRVAFAPFGKISDARVVKDMTTGKSKGYGFVSFY 145
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M+G++L
Sbjct: 146 NKLDAENAIINMSGQWL 162
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG ++E +RQ FSPFG I E+R + KG ++IRFS AA A+ +
Sbjct: 206 VYCGGIQSGLSEHLMRQTFSPFGQIMEVRVFPE------KGYSFIRFSSHDSAAHAIVSV 259
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 260 NGTVIEGH 267
>gi|119469244|ref|XP_001257924.1| RNP domain protein [Neosartorya fischeri NRRL 181]
gi|119406076|gb|EAW16027.1| RNP domain protein [Neosartorya fischeri NRRL 181]
Length = 372
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G +VT+D L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 244 DPAHFRLFVGNLAG-EVTDDSLLKAFSRYSSVQKARVIRDKRTQKSKGYGFVSFSNGDDY 302
Query: 77 AKAVEEMNGEFLPNH 91
A EM G+++ +H
Sbjct: 303 FAAAREMQGKYIGSH 317
>gi|117557982|gb|AAI27339.1| ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B)
[Xenopus (Silurana) tropicalis]
Length = 346
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 133 KTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPG 192
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 193 ATEPITVKFA 202
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 273 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 326
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 47 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 104
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 105 QTKTIKV 111
>gi|395863336|ref|XP_003803852.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Otolemur
garnettii]
gi|395863340|ref|XP_003803854.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Otolemur
garnettii]
Length = 514
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TE LR F PFG ++ I+ +KD TG SKG +I FS + A KA+E++NG L
Sbjct: 245 NITEAMLRGIFEPFGRLESIQLMKDSETGRSKGYGFITFSDSECAKKALEQLNG--LELA 302
Query: 92 SKPIKV 97
+P+KV
Sbjct: 303 GRPMKV 308
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN SKG+AY+ F S A+
Sbjct: 153 DLEAFFSTVGKVRDVRMISDRNARRSKGIAYVEFVDVSSVPLAI 196
>gi|291383147|ref|XP_002708097.1| PREDICTED: ELAV-like 2-like isoform 2 [Oryctolagus cuniculus]
Length = 376
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 163 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 222
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 223 ATEPITVKFA 232
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 303 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 356
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 77 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 134
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 135 QTKTIKV 141
>gi|219130188|ref|XP_002185253.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403432|gb|EEC43385.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 605
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
VT+D LR F+ G I R +KD G S+G ++ +S E+ +AV EMNG+ + N
Sbjct: 338 VTDDMLRDEFAVMGTITSARVMKDAKDGRSRGFGFVCYSTPEESTRAVNEMNGKLIAN-- 395
Query: 93 KPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPGIPM 143
KPI V +A + E + Q + + P R PG+PM
Sbjct: 396 KPIFVALAQRREVRRAQLEAQHAN-RAGGPGQPGMMRAPMGAPMGYPGMPM 445
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 42 FSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
FS FGNI + V DR G S G Y+ + A A+E+++G +
Sbjct: 147 FSLFGNILSCKVVTDREGGVSMGYGYVHYETAEAANAAIEKLDGMLI 193
>gi|159124258|gb|EDP49376.1| RNP domain protein [Aspergillus fumigatus A1163]
Length = 370
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G +VT+D L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 242 DPAHFRLFVGNLAG-EVTDDSLLKAFSRYSSVQKARVIRDKRTQKSKGYGFVSFSNGDDY 300
Query: 77 AKAVEEMNGEFLPNH 91
A EM G+++ +H
Sbjct: 301 FAAAREMQGKYIGSH 315
>gi|390458027|ref|XP_003732041.1| PREDICTED: ELAV-like protein 2 [Callithrix jacchus]
gi|402897271|ref|XP_003911692.1| PREDICTED: ELAV-like protein 2 isoform 6 [Papio anubis]
gi|426361471|ref|XP_004047934.1| PREDICTED: ELAV-like protein 2 isoform 6 [Gorilla gorilla gorilla]
Length = 390
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 164 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 223
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 224 ATEPITVKFA 233
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 317 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 370
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNT-GESKGVAYIRFSKTSEAAKAVEEMNGEFLP 89
+++T+++L+ F G I+ + V+D+ T G+S G ++ + +A KA+ +NG L
Sbjct: 77 QNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLGYGFVNYIDPKDAEKAINTLNGLRL- 135
Query: 90 NHSKPIKV 97
+K IKV
Sbjct: 136 -QTKTIKV 142
>gi|403169797|ref|XP_003889581.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375168424|gb|EHS63645.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 715
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 67/144 (46%), Gaps = 27/144 (18%)
Query: 35 EDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKP 94
++ L+ F+PFG I + +KD G SKG ++ FS EA KAV EMNG+ L SKP
Sbjct: 381 DEKLQNEFTPFGTITSCKVMKDEK-GTSKGFGFVCFSSPDEATKAVAEMNGKML--GSKP 437
Query: 95 IKVLIAAK-------LEFKEGYRG---GQKISVQ------YTSPQ-------SAAYARDK 131
+ V +A + LE + R Q+I+ Y +P +AAY
Sbjct: 438 LYVSLAQRKEVRKQQLEAQMSQRSQMRSQQIAAAGIPGAPYGAPPNPMYFGGAAAYPPHG 497
Query: 132 FHGFAYPP-GIPMVVVPDFSYGLP 154
G YPP G+P + P Y P
Sbjct: 498 GRGMMYPPNGMPAGMPPRPRYAPP 521
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 21 PHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
P++ L++ VTE L + FS G + IR +D T S G AY+ + ++A +A
Sbjct: 82 PNTSLYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADAERA 141
Query: 80 VEEMNGEFLPNHS 92
+E++N + N +
Sbjct: 142 LEQLNYSLIKNKA 154
>gi|189192536|ref|XP_001932607.1| RNP domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187974213|gb|EDU41712.1| RNP domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 289
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 53/84 (63%), Gaps = 5/84 (5%)
Query: 15 EYNDEPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
E+N P H RLFI L G +VT+D L + F+ + ++ + R V+D+ + +S+ ++ FS
Sbjct: 145 EWN--PLHPRLFIGNLAG-EVTDDSLLKAFAKYPSLSKARVVRDKKSTKSRSYGFVSFSD 201
Query: 73 TSEAAKAVEEMNGEFLPNHSKPIK 96
T + +A +EMNG+++ +H IK
Sbjct: 202 TDDYFRAAKEMNGKYIGSHPVLIK 225
>gi|281343373|gb|EFB18957.1| hypothetical protein PANDA_015655 [Ailuropoda melanoleuca]
Length = 369
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 198 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFEL--A 255
Query: 92 SKPIKV 97
+P++V
Sbjct: 256 GRPMRV 261
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 106 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 149
>gi|397521307|ref|XP_003830738.1| PREDICTED: ELAV-like protein 2 isoform 1 [Pan paniscus]
Length = 359
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 286 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 339
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|320039969|gb|EFW21903.1| RNA-binding protein [Coccidioides posadasii str. Silveira]
Length = 252
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 19 EPPHSRLFILCGK---DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
+P H RLF CG +VT+D L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 112 DPAHFRLF--CGNLAGEVTDDSLLKAFSKYPSVQKARVIRDKRTEKSKGYGFVSFSDGED 169
Query: 76 AAKAVEEMNGEFLPNH 91
+A EM G+++ +H
Sbjct: 170 YFRAAREMQGKYIGSH 185
>gi|330927808|ref|XP_003302008.1| hypothetical protein PTT_13679 [Pyrenophora teres f. teres 0-1]
gi|311322841|gb|EFQ89874.1| hypothetical protein PTT_13679 [Pyrenophora teres f. teres 0-1]
Length = 289
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 53/84 (63%), Gaps = 5/84 (5%)
Query: 15 EYNDEPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
E+N P H RLFI L G +VT+D L + F+ + ++ + R V+D+ + +S+ ++ FS
Sbjct: 145 EWN--PLHPRLFIGNLAG-EVTDDSLLKAFAKYPSLSKARVVRDKKSTKSRSYGFVSFSD 201
Query: 73 TSEAAKAVEEMNGEFLPNHSKPIK 96
T + +A +EMNG+++ +H IK
Sbjct: 202 TDDYFRAAKEMNGKYIGSHPVLIK 225
>gi|114649018|ref|XP_001154541.1| PREDICTED: polyadenylate-binding protein 3 isoform 5 [Pan
troglodytes]
Length = 633
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
D+ ++ L++ FSPFG I + + + G SKG ++ FS EA KAV EMNG +
Sbjct: 304 DIDDERLQKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIV--A 359
Query: 92 SKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPGIPMVVVP 147
+KP+ V +A + E ++ Y ++ +Y Q A R + A P G M VP
Sbjct: 360 TKPLYVALAQRKEERQAY-----LTNEYM--QRMASVRAVPNQRAPPSGYFMTAVP 408
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
G+D+ ++ L+ F FG ++ + D +G+SKG ++ F + +A KAV+EMNG+ L
Sbjct: 199 GEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKEL 256
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DVTE L + FSP G I IR +D T S AY+ F +A A++ MN + +
Sbjct: 21 DVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALDTMNFDVI--K 78
Query: 92 SKPIKVLIAAK 102
KP++++ + +
Sbjct: 79 GKPLRIMWSQR 89
>gi|378733387|gb|EHY59846.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 503
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 11 DRSREYND---EPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY 67
+R + Y D EP + D T++D+ + F+P G + IR DR TG KG Y
Sbjct: 345 NRRKSYGDQLGEPTDTLFLGNLSFDCTQEDVSEAFAPHGTVMGIRLPTDRETGAPKGFGY 404
Query: 68 IRFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
+ F EA A+E M G ++ N +PI++
Sbjct: 405 VTFGSVDEAKAALEAMQGGYIKN--RPIRL 432
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRF 70
+V E+ LR F FG + +R + DR TG SKG Y+ F
Sbjct: 267 NVDENWLRSEFEEFGELSGVRLMTDRQTGRSKGFGYVEF 305
>gi|195434178|ref|XP_002065080.1| GK14865 [Drosophila willistoni]
gi|194161165|gb|EDW76066.1| GK14865 [Drosophila willistoni]
Length = 725
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGE-----SKGVAYIRFSKTSEAAKAVEEMNG 85
K++T+ DL FSP+G I R + D T E SKGV +IRF + EA +A++E+NG
Sbjct: 216 KNMTQSDLESLFSPYGKIITSRILCDNITDEHAPGLSKGVGFIRFDQRFEADRAIKELNG 275
Query: 86 EFLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSA 125
N ++PI V A + + Y +PQSA
Sbjct: 276 TTPKNSTEPITVKFANN---PSSNKNSMQPLAAYIAPQSA 312
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 19 EP-PHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
EP P + L + + +++D++R F FG ++ + ++D+ TG+S G ++ + K +A
Sbjct: 116 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDA 175
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
KA+ +NG L N K IKV IA
Sbjct: 176 EKAINALNGLRLQN--KTIKVSIA 197
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ ++D + + KG ++ + EA A++ +NG L N
Sbjct: 382 ETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSLNGYTLGN 440
>gi|119174082|ref|XP_001239402.1| hypothetical protein CIMG_09023 [Coccidioides immitis RS]
Length = 485
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 165 RVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRS 224
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + ++A KA+ M+GE+L
Sbjct: 225 RGYGFVAFRERADAEKALSSMDGEWL 250
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY--IRFSKTSEA 76
P+ R + G D VTED LRQ F G++Q ++ + D+N +SKG+ Y + + A
Sbjct: 89 PNKRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNF-QSKGLNYGFVEYDDPGAA 147
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A++ +NG + H I+V A
Sbjct: 148 ERAMQTLNGRRV--HQSEIRVNWA 169
>gi|62088168|dbj|BAD92531.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) variant [Homo sapiens]
Length = 367
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 142 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 201
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 202 ATEPITVKFA 211
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 294 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 347
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 56 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 113
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 114 QTKTIKV 120
>gi|83315537|ref|XP_730836.1| ribonucleoprotein [Plasmodium yoelii yoelii 17XNL]
gi|23490683|gb|EAA22401.1| ribonucleoprotein homolog F21B7.26 - Arabidopsis thaliana, putative
[Plasmodium yoelii yoelii]
Length = 440
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 20 PPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
PP + LFI + + DL Q FSPFG + R ++NTG ++G A++ + AA
Sbjct: 296 PPGANLFIFHVPNEWQQTDLIQAFSPFGELLSARIATEKNTGRNRGFAFVSYENIESAAA 355
Query: 79 AVEEMNG 85
A+ +MNG
Sbjct: 356 AISQMNG 362
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 22 HSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
++LFI K++TE+ ++ FS +G+++E+ +KD +TG KG ++++F+ +A A+
Sbjct: 113 QAKLFIGSLPKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAI 172
Query: 81 EEMNG-EFLPNHSKPIKVLIA 100
+NG + L ++P++V A
Sbjct: 173 SSLNGKKTLEGCNRPVEVRFA 193
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 20 PPHS-RLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PP S +LFI K+ E+ LR F FG + E+ ++D+ T K A+++ + SEA
Sbjct: 11 PPVSIKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASISEAD 70
Query: 78 KAVEEMNGE 86
A+ +N +
Sbjct: 71 NAIRSLNNQ 79
>gi|410978372|ref|XP_003995567.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Felis catus]
Length = 360
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 287 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 340
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|354491613|ref|XP_003507949.1| PREDICTED: ELAV-like protein 2 isoform 2 [Cricetulus griseus]
Length = 360
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 287 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 340
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|115511032|ref|NP_004423.2| ELAV-like protein 2 isoform a [Homo sapiens]
gi|197097794|ref|NP_001127414.1| ELAV-like protein 2 [Pongo abelii]
gi|149736900|ref|XP_001498035.1| PREDICTED: ELAV-like protein 2 isoform 1 [Equus caballus]
gi|291383145|ref|XP_002708096.1| PREDICTED: ELAV-like 2-like isoform 1 [Oryctolagus cuniculus]
gi|296190038|ref|XP_002743026.1| PREDICTED: ELAV-like protein 2 isoform 2 [Callithrix jacchus]
gi|311245695|ref|XP_001924617.2| PREDICTED: ELAV-like protein 2 isoform 1 [Sus scrofa]
gi|332229737|ref|XP_003264044.1| PREDICTED: ELAV-like protein 2 isoform 2 [Nomascus leucogenys]
gi|332831660|ref|XP_520515.3| PREDICTED: ELAV-like protein 2 isoform 3 [Pan troglodytes]
gi|345777488|ref|XP_865062.2| PREDICTED: ELAV-like protein 2 isoform 3 [Canis lupus familiaris]
gi|402897261|ref|XP_003911687.1| PREDICTED: ELAV-like protein 2 isoform 1 [Papio anubis]
gi|403272638|ref|XP_003928159.1| PREDICTED: ELAV-like protein 2 isoform 1 [Saimiri boliviensis
boliviensis]
gi|426220513|ref|XP_004004459.1| PREDICTED: ELAV-like protein 2 isoform 1 [Ovis aries]
gi|426361461|ref|XP_004047929.1| PREDICTED: ELAV-like protein 2 isoform 1 [Gorilla gorilla gorilla]
gi|75070704|sp|Q5R9Z6.1|ELAV2_PONAB RecName: Full=ELAV-like protein 2
gi|93141258|sp|Q12926.2|ELAV2_HUMAN RecName: Full=ELAV-like protein 2; AltName: Full=ELAV-like neuronal
protein 1; AltName: Full=Hu-antigen B; Short=HuB;
AltName: Full=Nervous system-specific RNA-binding
protein Hel-N1
gi|55729364|emb|CAH91414.1| hypothetical protein [Pongo abelii]
gi|119578989|gb|EAW58585.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_d [Homo sapiens]
gi|261860488|dbj|BAI46766.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like protein 2
[synthetic construct]
gi|380784355|gb|AFE64053.1| ELAV-like protein 2 isoform a [Macaca mulatta]
Length = 359
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 286 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 339
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|46592818|ref|NP_997568.1| ELAV-like protein 2 isoform 1 [Mus musculus]
gi|29294744|gb|AAH49125.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
gi|34849537|gb|AAH58393.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 373
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 148 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 207
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 208 ATEPITVKFA 217
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 300 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 353
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 62 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 119
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 120 QTKTIKV 126
>gi|521144|gb|AAA69698.1| ELAV-like neuronal protein 1 [Homo sapiens]
Length = 359
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 286 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIRSLNG 339
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|406700097|gb|EKD03282.1| hypothetical protein A1Q2_02392 [Trichosporon asahii var. asahii
CBS 8904]
Length = 387
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 12 RSREYNDE--PPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYI 68
R++ +ND+ PP L+I D TED + + F +G++Q +R DR TG +KG Y+
Sbjct: 289 RAKVFNDKRSPPADTLWIGSLPFDTTEDHIYETFGEYGDVQSVRLPTDRETGAAKGFGYV 348
Query: 69 RFSKTSEAAKAVEEMNG 85
F ++A A+E +NG
Sbjct: 349 TFGDVAQATAALEALNG 365
>gi|354491611|ref|XP_003507948.1| PREDICTED: ELAV-like protein 2 isoform 1 [Cricetulus griseus]
Length = 359
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 286 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 339
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|307207781|gb|EFN85399.1| Polyadenylate-binding protein 1 [Harpegnathos saltator]
Length = 552
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 18/135 (13%)
Query: 25 LFILCGKDVTEDD-LRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
L++ D +D+ LR+ F+PFG I + + + G SKG ++ FS+ EA KAV EM
Sbjct: 221 LYVKNLDDTIDDERLRKEFTPFGTITSAKVMMEE--GRSKGFGFVCFSQPEEATKAVTEM 278
Query: 84 NGEFLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPG--- 140
NG + SKP+ V +A + E ++ + ++ QY Q A R + G + PG
Sbjct: 279 NGRIV--GSKPLYVALAQRKEDRKAH-----LASQYM--QRMANVRMQQMGQIFQPGNAG 329
Query: 141 ---IPMVVVPDFSYG 152
+P + P YG
Sbjct: 330 SYFVPTLPQPQRFYG 344
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
D+TE L + FS G + IR +D T S G AY+ F + ++A +A++ MN + +
Sbjct: 21 DITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDMI--K 78
Query: 92 SKPIKVLIAAK 102
+PI+++ + +
Sbjct: 79 GRPIRIMWSQR 89
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
K++ + FS FGNI + +D +G SKG ++ F A K+++++NG L
Sbjct: 108 KNIDNKAMYDTFSAFGNILSCKVAQDE-SGASKGYGFVHFETEEAANKSIDKVNGMLL 164
>gi|303314025|ref|XP_003067021.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106689|gb|EER24876.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320039295|gb|EFW21229.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides posadasii str. Silveira]
Length = 483
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 163 RVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRS 222
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + ++A KA+ M+GE+L
Sbjct: 223 RGYGFVAFRERADAEKALSSMDGEWL 248
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY--IRFSKTSEA 76
P+ R + G D VTED LRQ F G++Q ++ + D+N SKG+ Y + + A
Sbjct: 89 PNKRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKN---SKGLNYGFVEYDDPGAA 145
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A++ +NG + H I+V A
Sbjct: 146 ERAMQTLNGRRV--HQSEIRVNWA 167
>gi|198426742|ref|XP_002131325.1| PREDICTED: similar to cold-inducible RNA-binding protein [Ciona
intestinalis]
Length = 167
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
D TEDDL + FS FG ++++ + DR+TG S+G A++ F + AA A++EM+ E
Sbjct: 15 DATEDDLTKRFSDFGEVEQVAIITDRDTGRSRGFAFVTFREEEGAATAIKEMHEEDFLGR 74
Query: 92 SKPIK 96
S ++
Sbjct: 75 SVTVR 79
>gi|143346991|gb|ABO93208.1| Elav [Platynereis dumerilii]
Length = 361
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K ++E +LR FS G+I R + D TG SKGV +IRF + EA +A++++NG+
Sbjct: 145 KSMSEPELRSLFSSCGSIINCRILCDNTTGLSKGVGFIRFDQRVEAERAIKQLNGKVPEG 204
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 205 ATEPITVKFA 214
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ ++D T + KG ++ + EA A++ +NG L N
Sbjct: 289 ETEENVLWQLFGPFGAVQSVKVIRDFQTQKCKGFGFVTMTNYDEALMAIQSLNGYTLGN 347
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVA--------YIRFSKTSEAAKAVEE 82
+ +T++++R FS G ++ + ++D+ T +S G + ++ + + +A KA+
Sbjct: 51 QTMTQEEIRSLFSSIGEVESCKLIRDKATDQSSGTSSCQSLGYGFVNYKRPEDAEKAINT 110
Query: 83 MNGEFLPNHSKPIKV 97
+NG L N K IKV
Sbjct: 111 LNGLRLQN--KTIKV 123
>gi|147806450|emb|CAN63219.1| hypothetical protein VITISV_033169 [Vitis vinifera]
Length = 257
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 7/77 (9%)
Query: 24 RLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
RLF CG +V +D L + FS F + R V+D+ TG+++G ++ FS S+ A A+
Sbjct: 150 RLF--CGDLGNEVNDDVLSKSFSRFPSFNMARVVRDKRTGKTRGFGFVSFSNPSDLAAAL 207
Query: 81 EEMNGEFLPNHSKPIKV 97
+EMNG+++ N +PIK+
Sbjct: 208 KEMNGKYVGN--RPIKL 222
>gi|119578990|gb|EAW58586.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_e [Homo sapiens]
Length = 374
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 148 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 207
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 208 ATEPITVKFA 217
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 301 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 354
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 62 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 119
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 120 QTKTIKV 126
>gi|15020256|gb|AAK74153.1| ELAV-like neuronal protein-2 [Mus musculus]
Length = 347
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 274 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 327
Score = 43.5 bits (101), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|391332510|ref|XP_003740677.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 341
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 18 DEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ DV LR+ F+PFG I + R V+D T +SKG ++ F + +A
Sbjct: 43 DTNKHFHIFVGDLSSDVETQQLREAFTPFGEISDCRVVRDPQTQKSKGYGFVSFLRKQDA 102
Query: 77 AKAVEEMNGEFL 88
A+ MNG++L
Sbjct: 103 ETAINAMNGQWL 114
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 81/197 (41%), Gaps = 42/197 (21%)
Query: 16 YNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
YN P + + CG + ++E+ +++ FS +G IQEIR KD KG A++RF+
Sbjct: 156 YNQASP-TNCTVYCGGLGQGLSEELIQKTFSSYGIIQEIRVFKD------KGYAFVRFAT 208
Query: 73 TSEAAKAV-----EEMNGEFL----------PNHSKPIKVLIAAKLEFKEGYRGGQKISV 117
A A+ ++NG+ + PN+ + + AA++ + Q +
Sbjct: 209 KESATHAIVAVHNTDVNGQIVKCSWGKESSDPNNQQVQHTIAAAQIPYH------QYQQM 262
Query: 118 QYTSPQSAAYARDKFHGFAYPPGIPMVVVPDFSYGLPRNGASALGGNAALSVVDSKGALQ 177
Y PQ+ A G P V + YG +G L V G
Sbjct: 263 NYWYPQNYAQPSQFVQG-----TTPAAAV-QYQYGQYFGNGFGMG----LQVAWPAGQAS 312
Query: 178 SLTKALA-QATSLLRSA 193
S + L QAT LL +A
Sbjct: 313 SQSAPLGQQATGLLPAA 329
>gi|119578987|gb|EAW58583.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_b [Homo sapiens]
Length = 373
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 148 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 207
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 208 ATEPITVKFA 217
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 300 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 353
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 62 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 119
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 120 QTKTIKV 126
>gi|6754264|ref|NP_034616.1| ELAV-like protein 2 isoform 2 [Mus musculus]
gi|13124206|sp|Q60899.1|ELAV2_MOUSE RecName: Full=ELAV-like protein 2; AltName: Full=ELAV-like neuronal
protein 1; AltName: Full=Hu-antigen B; Short=HuB;
AltName: Full=Nervous system-specific RNA-binding
protein Mel-N1
gi|1144004|gb|AAC52644.1| nervous system-specific RNA binding protein Mel-N1 [Mus musculus]
gi|15020258|gb|AAK74154.1| ELAV-like neuronal protein-1 [Mus musculus]
gi|148699000|gb|EDL30947.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 360
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 287 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 340
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|432103090|gb|ELK30412.1| ELAV-like protein 2 [Myotis davidii]
Length = 416
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 191 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 250
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 251 ATEPITVKFA 260
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 343 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 396
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 105 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 162
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 163 QTKTIKV 169
>gi|295424162|ref|NP_001171354.1| ELAV-like protein 2 isoform 4 [Mus musculus]
gi|74206254|dbj|BAE24886.1| unnamed protein product [Mus musculus]
gi|149044490|gb|EDL97749.1| rCG53485, isoform CRA_a [Rattus norvegicus]
Length = 359
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 286 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 339
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|348587076|ref|XP_003479294.1| PREDICTED: ELAV-like protein 2 isoform 1 [Cavia porcellus]
Length = 360
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 287 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 340
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|71414344|ref|XP_809277.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70873635|gb|EAN87426.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 601
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 23 SRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
S LF+ VT+++L + F P+G I+ + + D +TG+S+G+A+++F + + A KA E
Sbjct: 237 SNLFVSGLHASVTDNELYKHFHPYGEIESAKVMLDIHTGKSRGIAFVKFKEVANAEKAAE 296
Query: 82 EMNGEFLPNHSKPIKVLIA 100
EMN H + I V +A
Sbjct: 297 EMNNSVF--HGETIAVRVA 313
>gi|46592826|ref|NP_997569.1| ELAV-like protein 2 isoform 3 [Mus musculus]
gi|49114392|gb|AAH46598.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 347
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 274 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 327
Score = 43.5 bits (101), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|354491615|ref|XP_003507950.1| PREDICTED: ELAV-like protein 2 isoform 3 [Cricetulus griseus]
Length = 356
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 144 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 203
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 204 ATEPITVKFA 213
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 283 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 336
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 58 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 115
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 116 QTKTIKV 122
>gi|358332223|dbj|GAA31943.2| RNA-binding protein 42 [Clonorchis sinensis]
Length = 458
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 49/74 (66%), Gaps = 5/74 (6%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
I CG +V++D L + F+ + + Q+ + V+D+ TG+S+G ++ FS ++ +A+ EM
Sbjct: 360 IFCGDLGNEVSDDTLTRAFNRYASFQKAKVVRDKRTGKSRGYGFVSFSDPADFTRAMREM 419
Query: 84 NGEFLPNHSKPIKV 97
NG+++ N +PIK+
Sbjct: 420 NGKYVGN--RPIKL 431
>gi|158287021|ref|XP_309081.4| AGAP005292-PA [Anopheles gambiae str. PEST]
gi|157019814|gb|EAA04819.5| AGAP005292-PA [Anopheles gambiae str. PEST]
Length = 394
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 22 HSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
H +F+ ++ L++ F+PFG+I + R V+D T +SKG ++ F K +EA A+
Sbjct: 79 HYHIFVGDLSPEIETQTLKEAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKKTEAENAI 138
Query: 81 EEMNGEFL 88
MNG++L
Sbjct: 139 AAMNGQWL 146
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
+ ED L++ FSPFG IQEIR KD KG A++RFS A A+
Sbjct: 201 LNEDILQKTFSPFGTIQEIRVFKD------KGYAFVRFSTKEAATHAI 242
>gi|452986364|gb|EME86120.1| hypothetical protein MYCFIDRAFT_52503 [Pseudocercospora fijiensis
CIRAD86]
Length = 482
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S E + I G +V ++ L Q FS FGN+ E R + D TG S
Sbjct: 154 RVNWAYQSNTATKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGNVSEARVMWDMKTGRS 213
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F EA KA+ M+GE+L
Sbjct: 214 RGYGFVAFRDRGEAEKALSSMDGEWL 239
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY--IRFSKTSEA 76
P+ R + G D VTED L+Q F G++Q ++ + D+N +SKG Y + + A
Sbjct: 78 PNKRALYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPDKNF-QSKGYNYGFVEYDDPGAA 136
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A++ +NG + H + I+V A
Sbjct: 137 ERAMQTLNGRRV--HQQEIRVNWA 158
>gi|81914424|sp|Q8CH84.1|ELAV2_RAT RecName: Full=ELAV-like protein 2; AltName: Full=Hu-antigen B;
Short=HuB
gi|27374986|dbj|BAC53775.1| RNA binding protein HuB [Rattus norvegicus]
Length = 359
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 286 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 339
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|363744747|ref|XP_001233484.2| PREDICTED: ELAV-like protein 2 isoform 1 [Gallus gallus]
Length = 345
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 133 KTMTQKELEQLFSQYGRIITSRILVDQVTGMSRGVGFIRFDKRIEAEEAIKGLNGQKPPA 192
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 193 ATEPITVKFA 202
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 272 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 325
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 47 QSMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDAEKAINTLNGLRL-- 104
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 105 QTKTIKV 111
>gi|158253638|gb|AAI54064.1| tnrc4 protein [Xenopus (Silurana) tropicalis]
Length = 462
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 1 MDRNYRINTHDRSREYNDEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNT 59
M+R ++ D D +LF+ + GK T++D+R+ F PFGNI E ++ +
Sbjct: 77 MNRPIQVKPADSESRGEDR----KLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGPD- 131
Query: 60 GESKGVAYIRFSKTSEAAKAVEEMNGE-FLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQ 118
G SKG A+++F +EA A+ ++G LP S + V+ A E + G R Q+++ Q
Sbjct: 132 GTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSL-VVKFADTEKERGLRRMQQVANQ 190
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 19 EPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
EP +LFI +++ E DL+ F FG I E+ +KD+ TG KG A++ + A
Sbjct: 3 EPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESAL 62
Query: 78 KAVEEMNGE-FLPNHSKPIKV 97
KA ++ + LP ++PI+V
Sbjct: 63 KAQSALHEQKTLPGMNRPIQV 83
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
++ T+ ++ Q F PFGN+ + DR T +SK ++ F A A++ MNG
Sbjct: 386 QEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQAMNG 440
>gi|15020254|gb|AAK74152.1| ELAV-like neuronal protein-3 [Mus musculus]
Length = 348
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 275 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 328
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|116180428|ref|XP_001220063.1| hypothetical protein CHGG_00842 [Chaetomium globosum CBS 148.51]
gi|88185139|gb|EAQ92607.1| hypothetical protein CHGG_00842 [Chaetomium globosum CBS 148.51]
Length = 372
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G + T++ L + F+ + ++Q+ + V+D+ T +SKG ++ FS +
Sbjct: 221 DPAHLRLFVGNLAG-ETTDESLLKAFARWKSVQKAKVVRDKRTTKSKGFGFVSFSDPEDF 279
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAAKLEFK 106
+A +EMNG+++ +H P+ V+ AK E K
Sbjct: 280 FQAAKEMNGKYIQSH--PV-VVHKAKTEIK 306
>gi|397521309|ref|XP_003830739.1| PREDICTED: ELAV-like protein 2 isoform 2 [Pan paniscus]
gi|397521311|ref|XP_003830740.1| PREDICTED: ELAV-like protein 2 isoform 3 [Pan paniscus]
gi|397521313|ref|XP_003830741.1| PREDICTED: ELAV-like protein 2 isoform 4 [Pan paniscus]
Length = 346
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 273 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 326
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|344248615|gb|EGW04719.1| ELAV-like protein 2 [Cricetulus griseus]
Length = 347
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 274 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 327
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|298204769|emb|CBI25267.3| unnamed protein product [Vitis vinifera]
Length = 221
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 21 PHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
P + + CG +V +D L + FS F + R V+D+ TG+++G ++ FS S+ A
Sbjct: 109 PENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTRGFGFVSFSNPSDLA 168
Query: 78 KAVEEMNGEFLPNHSKPIKV 97
A++EMNG+++ N +PIK+
Sbjct: 169 AALKEMNGKYVGN--RPIKL 186
>gi|258574779|ref|XP_002541571.1| potential RNA binding protein [Uncinocarpus reesii 1704]
gi|237901837|gb|EEP76238.1| potential RNA binding protein [Uncinocarpus reesii 1704]
Length = 414
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 19 EPPHSRLFILCGK---DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
+P H RLF CG +VT+D L + FS + ++Q+ R V+D+ T +SKG ++ FS +
Sbjct: 275 DPAHFRLF--CGNLAGEVTDDSLLKAFSKYPSVQKARVVRDKRTEKSKGYGFVSFSDGDD 332
Query: 76 AAKAVEEMNGEFLPNH 91
+A EM G+++ +H
Sbjct: 333 YFRAAREMQGKYIGSH 348
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D+ EDDLR F PFG+IQ+I D TG SKG A++++ +A KA++ NG
Sbjct: 281 DLAEDDLRTVFEPFGDIQQINLHIDPETGRSKGFAFVQYKSPEDAKKALQHCNG 334
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+E +L + F G + +IR + DRN+ +SKG YI + S A+ ++NG +
Sbjct: 180 ASESELFEFFGKAGKVHDIRLITDRNSRKSKGFGYIEYLDKSSVPLALHQLNGTQCKGQT 239
Query: 93 KPIKVLIAAK 102
+++ A K
Sbjct: 240 VLVQITQAEK 249
>gi|387017380|gb|AFJ50808.1| Nucleolysin TIAR [Crotalus adamanteus]
Length = 388
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 103 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMTTGKSKGYGFVSFY 162
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 163 NKLDAENAIVHMGGQWL 179
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I E R KG +++RFS AA A+ +
Sbjct: 223 VYCGGIASGLTDQLMRQTFSPFGQIVETRAFP------VKGYSFVRFSTHESAAHAIVSV 276
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 277 NGTTIEGH 284
>gi|349942059|dbj|GAA29907.1| ELAV like protein 2/3/4 [Clonorchis sinensis]
Length = 645
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 28 LCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
+CG + +T+ +L + FS G+I R + D TG S+GVA+IR+ + +EA A+ ++NG
Sbjct: 210 ICGLPRKMTQPELEKLFSACGHIITARILYDTKTGLSRGVAFIRYDQRTEAEAAIRKLNG 269
Query: 86 EFLPNHSKPIKVLIA 100
P S+PI V A
Sbjct: 270 YLPPGASEPITVKFA 284
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Query: 18 DEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTS 74
+ PP ++ ++ +++++++R FS G ++ + V+++ +GES G A+++F
Sbjct: 113 NSPPENKTNLIINYLPPNMSQEEVRALFSSIGEVESCKLVREKTSGESLGYAFVKFYDPL 172
Query: 75 EAAKAVEEMNGEFLPNHSKPIKVLIA 100
+A KA++ +NG L N K +KV +A
Sbjct: 173 DAGKAIKTLNGLRLQN--KTVKVSLA 196
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG +Q ++ ++D T + KG ++ S EA A+ +NG
Sbjct: 540 DTEESTLWQLFGPFGAVQTVKVIRDPITSKCKGFGFVTMSNYEEALLAIHSLNG 593
>gi|359067954|ref|XP_002707879.2| PREDICTED: LOW QUALITY PROTEIN: eLAV (embryonic lethal, abnormal
vision, Drosophila)-like 2 (Hu antigen B)-like [Bos
taurus]
Length = 346
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 273 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 326
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|348587078|ref|XP_003479295.1| PREDICTED: ELAV-like protein 2 isoform 2 [Cavia porcellus]
Length = 347
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 274 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 327
Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|281212020|gb|EFA86181.1| hypothetical protein PPL_00743 [Polysphondylium pallidum PN500]
Length = 602
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 19 EPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
+ H+ L++ VT++DL + FS FG + E + + D NTG S+ V ++ FS A
Sbjct: 235 QSTHANLYVNRLEPQVTKEDLAEAFSKFGEVVETKILVDPNTGSSRCVGFVHFSARRNAL 294
Query: 78 KAVEEMNGEFLPNHSKPIKVLIA 100
A+ MNG +P + PI V A
Sbjct: 295 TALSAMNGANIPCQTGPIYVKFA 317
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K + +DLR F+ FG I + V R ++ G +++++ A A+E+MNG
Sbjct: 162 KHFSSEDLRDMFANFGEIVSYKVVTKRGNSKNMGYGFVKYATPEGATAAIEQMNG----- 216
Query: 91 HSKPIKVL 98
HS +K L
Sbjct: 217 HSIDLKFL 224
>gi|171687054|ref|XP_001908468.1| hypothetical protein [Podospora anserina S mat+]
gi|170943488|emb|CAP69141.1| unnamed protein product [Podospora anserina S mat+]
Length = 481
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 159 RVNWAYQSNNTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRS 218
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F EA KA+ M+GE+L
Sbjct: 219 RGYGFVAFRDRPEAEKALSSMDGEWL 244
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY--IRFSKTSEA 76
P+ R + G D VTED LRQ F G++Q ++ + D+N +KG Y + + A
Sbjct: 85 PNKRALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKN---AKGYNYGFVEYDDPGSA 141
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A++ +NG + H I+V A
Sbjct: 142 ERAMQTLNGRRV--HQAEIRVNWA 163
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+++D LR+ FS FG I + ++D+N G SKG ++ FS EA++A+ EMNG+ L
Sbjct: 330 ISDDQLRELFSTFGKITSCKVMRDQN-GVSKGSGFVAFSTREEASQAITEMNGKML--SG 386
Query: 93 KPIKVLIAAKLE 104
KP+ V A + E
Sbjct: 387 KPLYVAFAQRKE 398
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
VT+ L + FS G + +R +D N+ S G AY+ FS +AA+A+E +N F+P ++
Sbjct: 48 VTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNFSNPMDAARALEMLN--FVPLNN 105
Query: 93 KPIKVL 98
KPI+V+
Sbjct: 106 KPIRVM 111
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 6 RINTHDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKG 64
R N+ D++R N +F+ + T++DL + FS +GNI V G+S+
Sbjct: 206 RDNSFDKARFNN-------VFVKNLSESTTKEDLVKIFSEYGNITSA-VVMVGTDGKSRC 257
Query: 65 VAYIRFSKTSEAAKAVEEMNGE 86
+I F +A +AVEE+NG+
Sbjct: 258 FGFINFESPDDAVRAVEELNGK 279
>gi|355754577|gb|EHH58478.1| hypothetical protein EGM_08341 [Macaca fascicularis]
Length = 637
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
D+ ++ LR+ FSPFG I + + + G SKG ++ FS EA KAV EMNG +
Sbjct: 304 DIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIV--A 359
Query: 92 SKPIKVLIAAKLEFKEGYRGGQ 113
+KP+ V +A + E ++ + Q
Sbjct: 360 TKPLYVALAQRKEERQAHLTNQ 381
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
G+D+ ++ L+ F FG ++ + D +G+SKG ++ F + +A KAV+EMNG+ L
Sbjct: 199 GEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDARKAVDEMNGKEL 256
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DVTE L + FS G I IR +D T S AY+ F +A +A++ MN + +
Sbjct: 21 DVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAERALDTMNFDVI--K 78
Query: 92 SKPIKVLIAAK 102
KP++++ + +
Sbjct: 79 GKPVRIMWSQR 89
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
K + L S FGNI + V D N SKG ++ F A +A+E+MNG L
Sbjct: 108 KSINNKVLYDTVSAFGNILSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGTLL 163
>gi|283945529|ref|NP_001164666.1| ELAV-like protein 2 isoform b [Homo sapiens]
gi|283945537|ref|NP_001164668.1| ELAV-like protein 2 isoform b [Homo sapiens]
gi|386781798|ref|NP_001247929.1| ELAV-like protein 2 [Macaca mulatta]
gi|73971067|ref|XP_865045.1| PREDICTED: ELAV-like protein 2 isoform 2 [Canis lupus familiaris]
gi|296190040|ref|XP_002743027.1| PREDICTED: ELAV-like protein 2 isoform 3 [Callithrix jacchus]
gi|296190042|ref|XP_002743028.1| PREDICTED: ELAV-like protein 2 isoform 4 [Callithrix jacchus]
gi|311245697|ref|XP_003121925.1| PREDICTED: ELAV-like protein 2 isoform 2 [Sus scrofa]
gi|332229735|ref|XP_003264043.1| PREDICTED: ELAV-like protein 2 isoform 1 [Nomascus leucogenys]
gi|332229739|ref|XP_003264045.1| PREDICTED: ELAV-like protein 2 isoform 3 [Nomascus leucogenys]
gi|332831658|ref|XP_003312071.1| PREDICTED: ELAV-like protein 2 isoform 1 [Pan troglodytes]
gi|332831662|ref|XP_003312072.1| PREDICTED: ELAV-like protein 2 isoform 2 [Pan troglodytes]
gi|338719470|ref|XP_003364010.1| PREDICTED: ELAV-like protein 2 isoform 2 [Equus caballus]
gi|344271095|ref|XP_003407377.1| PREDICTED: ELAV-like protein 2-like [Loxodonta africana]
gi|402897263|ref|XP_003911688.1| PREDICTED: ELAV-like protein 2 isoform 2 [Papio anubis]
gi|402897265|ref|XP_003911689.1| PREDICTED: ELAV-like protein 2 isoform 3 [Papio anubis]
gi|402897267|ref|XP_003911690.1| PREDICTED: ELAV-like protein 2 isoform 4 [Papio anubis]
gi|403272640|ref|XP_003928160.1| PREDICTED: ELAV-like protein 2 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403272642|ref|XP_003928161.1| PREDICTED: ELAV-like protein 2 isoform 3 [Saimiri boliviensis
boliviensis]
gi|410042502|ref|XP_003951453.1| PREDICTED: ELAV-like protein 2 [Pan troglodytes]
gi|410978370|ref|XP_003995566.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Felis catus]
gi|426220515|ref|XP_004004460.1| PREDICTED: ELAV-like protein 2 isoform 2 [Ovis aries]
gi|426220517|ref|XP_004004461.1| PREDICTED: ELAV-like protein 2 isoform 3 [Ovis aries]
gi|426361463|ref|XP_004047930.1| PREDICTED: ELAV-like protein 2 isoform 2 [Gorilla gorilla gorilla]
gi|426361465|ref|XP_004047931.1| PREDICTED: ELAV-like protein 2 isoform 3 [Gorilla gorilla gorilla]
gi|426361467|ref|XP_004047932.1| PREDICTED: ELAV-like protein 2 isoform 4 [Gorilla gorilla gorilla]
gi|441622584|ref|XP_004088846.1| PREDICTED: ELAV-like protein 2 [Nomascus leucogenys]
gi|21265137|gb|AAH30692.1| ELAVL2 protein [Homo sapiens]
gi|119578985|gb|EAW58581.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_a [Homo sapiens]
gi|119578986|gb|EAW58582.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_a [Homo sapiens]
gi|123981428|gb|ABM82543.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|123996267|gb|ABM85735.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|157928304|gb|ABW03448.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|384945702|gb|AFI36456.1| ELAV-like protein 2 isoform b [Macaca mulatta]
gi|384945704|gb|AFI36457.1| ELAV-like protein 2 isoform b [Macaca mulatta]
gi|387541444|gb|AFJ71349.1| ELAV-like protein 2 isoform b [Macaca mulatta]
Length = 346
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 273 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 326
Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|342870153|gb|EGU73450.1| hypothetical protein FOXB_16088 [Fusarium oxysporum Fo5176]
Length = 474
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 155 RVNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRS 214
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F EA KA+ M+GE+L
Sbjct: 215 RGYGFVAFRDRPEAEKALSSMDGEWL 240
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
P+ R + G D VTE+ LRQ F G++Q ++ + D+N ++ + A +
Sbjct: 81 PNKRALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNA-RGYNYGFVEYDDPGAAER 139
Query: 79 AVEEMNGEFLPNHSKPIKVLIA 100
A++ +NG + H I+V A
Sbjct: 140 AMQTLNGRRV--HQSEIRVNWA 159
>gi|71407577|ref|XP_806247.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70869937|gb|EAN84396.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 601
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 23 SRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
S LF+ VT+++L + F P+G I+ + + D +TG+S+G+A+++F + + A KA E
Sbjct: 237 SNLFVSGLHASVTDNELYKHFHPYGEIESAKVMLDIHTGKSRGIAFVKFKEVANAEKAAE 296
Query: 82 EMNGEFLPNHSKPIKVLIA 100
EMN H + I V +A
Sbjct: 297 EMNNSVF--HGETIAVRVA 313
>gi|169768824|ref|XP_001818882.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus oryzae RIB40]
gi|238498168|ref|XP_002380319.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|83766740|dbj|BAE56880.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693593|gb|EED49938.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|391874569|gb|EIT83434.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 477
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L+Q FS FG++ E R + D TG S
Sbjct: 164 RVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEILQQAFSAFGSVSEARVMWDMKTGRS 223
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F ++A KA+ M+GE+L
Sbjct: 224 RGYGFVAFRDRADADKALGSMDGEWL 249
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY--IRFSKTSEA 76
P+ R + G D VTED L+Q F G++ ++ + D+N SKG Y + F A
Sbjct: 87 PNKRALYVGGLDQRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAA 146
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A++ +NG + H I+V A
Sbjct: 147 ERAMQTLNGRRI--HQSEIRVNWA 168
>gi|119578988|gb|EAW58584.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_c [Homo sapiens]
Length = 360
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 148 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 207
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 208 ATEPITVKFA 217
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 287 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 340
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 62 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 119
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 120 QTKTIKV 126
>gi|905387|gb|AAA70417.1| Hel-N2 [Homo sapiens]
Length = 346
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ +L Q FS +G I R + D+ TG S+GV +IRF K EA +A++ +NG+ P
Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Query: 91 HSKPIKVLIA 100
++PI V A
Sbjct: 194 ATEPITVKFA 203
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 273 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIRSLNG 326
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+++L+ F G I+ + V+D+ TG+S G ++ + +A KA+ +NG L
Sbjct: 48 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL-- 105
Query: 91 HSKPIKV 97
+K IKV
Sbjct: 106 QTKTIKV 112
>gi|194764023|ref|XP_001964131.1| GF21392 [Drosophila ananassae]
gi|190619056|gb|EDV34580.1| GF21392 [Drosophila ananassae]
Length = 353
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K++++ DL F+ +G I R + D +G SKGV +IRF + +EA +A++E+NG+
Sbjct: 136 KNLSQPDLEGMFASYGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAIQELNGKTPKG 195
Query: 91 HSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYAR 129
+++PI V A + ++ Y +PQ+AA R
Sbjct: 196 YAEPITVKFANNPSNSAKAQIAPPLTA-YLTPQAAAATR 233
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
+ E+ L Q F PFG +Q ++ ++D T + KG ++ + EA A++ +NG L N
Sbjct: 280 ETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNR 339
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 17/96 (17%)
Query: 17 NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDR---------------NTGE 61
NDE + + + +T++++R FS G ++ + V+D+ G+
Sbjct: 21 NDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSVLPASLTALNPALQQGQ 80
Query: 62 SKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
S G ++ + + +A KAV +NG L N K IKV
Sbjct: 81 SLGYGFVNYVRAEDAEKAVNTLNGLRLQN--KVIKV 114
>gi|125582928|gb|EAZ23859.1| hypothetical protein OsJ_07575 [Oryza sativa Japonica Group]
Length = 234
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 21 PHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
P + + CG +V +D L + FS + + R ++D+ TG+++G A++ F+ S+ A
Sbjct: 122 PENDFRLFCGDLGNEVNDDVLTKAFSKYPSFNMARVIRDKWTGKTRGYAFVSFANASDLA 181
Query: 78 KAVEEMNGEFLPNHSKPIKV 97
A++EMNG+++ N +PIK+
Sbjct: 182 AALKEMNGKYVGN--RPIKL 199
>gi|390177486|ref|XP_003736390.1| GA30124 [Drosophila pseudoobscura pseudoobscura]
gi|388859063|gb|EIM52463.1| GA30124 [Drosophila pseudoobscura pseudoobscura]
Length = 464
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 29 CGKD-------VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
CG D + L+ F+PFG I + R V+D T +SKG ++ F K SEA A+
Sbjct: 103 CGSDLDCQYAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAIT 162
Query: 82 EMNGEFL 88
MNG++L
Sbjct: 163 AMNGQWL 169
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 2 DRNYRINTHDRSREYNDEPPHSRLFILCGKD-------VTEDDLRQGFSPFGNIQEIRCV 54
D N + T D YN P + + CG + ED L++ FSP+G IQEIR
Sbjct: 189 DMNAKPLTFDEV--YNQSSP-TNCTVYCGGINGALSGFLNEDILQKTFSPYGTIQEIRVF 245
Query: 55 KDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
KD KG A++RFS A A+ +N + + +P+K
Sbjct: 246 KD------KGYAFVRFSTKEAATHAIVAVNNTEI--NQQPVKC 280
>gi|307165845|gb|EFN60208.1| Polyadenylate-binding protein 1 [Camponotus floridanus]
Length = 635
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 18/135 (13%)
Query: 25 LFILCGKDVTEDD-LRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
L++ D +D+ LR+ F+PFG I + + + G SKG ++ FS+ EA KAV EM
Sbjct: 298 LYVKNLDDTIDDERLRKEFTPFGTITSAKVMMEE--GRSKGFGFVCFSQPEEATKAVTEM 355
Query: 84 NGEFLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPG--- 140
NG + SKP+ V +A + E ++ + ++ QY Q A R + G + PG
Sbjct: 356 NGRIV--GSKPLYVALAQRKEDRKAH-----LASQYM--QRMANVRMQQMGQIFQPGNAG 406
Query: 141 ---IPMVVVPDFSYG 152
+P + P YG
Sbjct: 407 SYFVPTLPQPQRFYG 421
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
D+TE L + FS G + IR +D T S G AY+ F + ++A +A++ MN + +
Sbjct: 21 DITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDMI--K 78
Query: 92 SKPIKVLIAAK 102
+PI+++ + +
Sbjct: 79 GRPIRIMWSQR 89
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGE 86
G+D+T+D L++ F +G I + V ++ G+S+G ++ F A +AV E+NG+
Sbjct: 200 GEDMTDDKLKEMFEKYGTITSHK-VMSKDDGKSRGFGFVAFEDPDAAEQAVLELNGK 255
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
K++ + FS FGNI + +D +G SKG ++ F A K+++++NG L
Sbjct: 108 KNIDNKAMYDTFSAFGNILSCKVAQDE-SGASKGYGFVHFETEEAANKSIDKVNGMLL 164
>gi|326496421|dbj|BAJ94672.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 233
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 19 EPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
E P + + CG +V +D L + FS F + + V+D+ TG++KG ++ FS ++
Sbjct: 119 EWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFVSFSNPTD 178
Query: 76 AAKAVEEMNGEFLPNHSKPIKV 97
A A++EMNG+++ N +PIK+
Sbjct: 179 LAAAIKEMNGKYVGN--RPIKL 198
>gi|303311987|ref|XP_003066005.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240105667|gb|EER23860.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 424
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 19 EPPHSRLFILCGK---DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
+P H RLF CG +VT+D L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 284 DPAHFRLF--CGNLAGEVTDDSLLKAFSKYPSVQKARVIRDKRTEKSKGYGFVSFSDGED 341
Query: 76 AAKAVEEMNGEFLPNH 91
+A EM G+++ +H
Sbjct: 342 YFRAAREMQGKYIGSH 357
>gi|16198525|gb|AAH15944.1| TIA1 protein [Homo sapiens]
gi|119620232|gb|EAW99826.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_d [Homo sapiens]
gi|119620233|gb|EAW99827.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_d [Homo sapiens]
Length = 214
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
++T +D++ F+PFG I + R VKD TG+SKG ++ F +A A+++M G++L
Sbjct: 116 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 172
>gi|410218752|gb|JAA06595.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307724|gb|JAA32462.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307728|gb|JAA32464.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 442
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 273 NITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLNGFELAG- 331
Query: 92 SKPIKV 97
+P++V
Sbjct: 332 -RPMRV 336
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 181 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 224
>gi|358391182|gb|EHK40586.1| hypothetical protein TRIATDRAFT_301415 [Trichoderma atroviride IMI
206040]
Length = 211
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 60/100 (60%), Gaps = 8/100 (8%)
Query: 9 THDRSREYNDEPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVA 66
T D E++ P H RLF+ L G + T++ L + FS + ++Q+ R ++D+ T +SKG
Sbjct: 57 TDDTLLEWD--PSHLRLFVGNLAG-ETTDESLLKAFSRWKSVQKARVIRDKRTTKSKGYG 113
Query: 67 YIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIAAKLEFK 106
++ FS + +A +EM+G+++ +H P+ V+ A E K
Sbjct: 114 FVSFSDADDFFQAAKEMHGKYIQSH--PV-VVKKANTEIK 150
>gi|10880789|gb|AAG24388.1|AF275678_1 PP239 protein [Homo sapiens]
Length = 418
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 251 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 309
Query: 92 SKPIKV 97
+P++V
Sbjct: 310 -RPMRV 314
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 159 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 202
>gi|410261842|gb|JAA18887.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349771|gb|JAA41489.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 442
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 273 NITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLNGFELAG- 331
Query: 92 SKPIKV 97
+P++V
Sbjct: 332 -RPMRV 336
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 181 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 224
>gi|114652069|ref|XP_001159523.1| PREDICTED: probable RNA-binding protein 23 isoform 11 [Pan
troglodytes]
Length = 426
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 257 NITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLNGFELAG- 315
Query: 92 SKPIKV 97
+P++V
Sbjct: 316 -RPMRV 320
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 165 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 208
>gi|66825827|ref|XP_646268.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60474730|gb|EAL72667.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 368
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMN--GEFLPN 90
+ E+ + Q F+ FGNI +I +KD+ T SKG A+I FS EA A+ N G FL N
Sbjct: 29 MNEEGVSQIFNKFGNILDITIIKDKRTNVSKGCAFITFSTKEEADNALNTTNESGTFLEN 88
Query: 91 HSKPIKV 97
+KP++V
Sbjct: 89 MNKPLQV 95
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 33/51 (64%)
Query: 35 EDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
+++L+Q F+P+GN+ + D+NT +SK ++ + T A A++E+NG
Sbjct: 300 DEELKQLFAPYGNVISSKVFIDKNTQQSKCFGFVSYDNTQSAIAAIQELNG 350
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 19 EPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
E +LFI ED +R F +G I+++ V++++ G+ KG +I++S E+
Sbjct: 103 EKMERKLFIGMLGTSDEDQIRILFGNYGIIEDLNIVREKD-GKPKGYGFIKYSTRDESEN 161
Query: 79 AVEEMNGEF-LPNHSKPIKVLIA 100
A+ E++G+ LP + PI V A
Sbjct: 162 ALREIDGKHTLPGSNLPIIVKFA 184
>gi|346465875|gb|AEO32782.1| hypothetical protein [Amblyomma maculatum]
Length = 558
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED L+ F PFG I +I +KD T SKG +I F + +A KA+E++NG L
Sbjct: 309 NITEDMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNGFELAG- 367
Query: 92 SKPIKV 97
+P+KV
Sbjct: 368 -RPMKV 372
Score = 36.6 bits (83), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
DL + FS G ++++R + D T SKG+AY+ F E+ +NG+ L
Sbjct: 212 DLEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEFLDV-ESVPLAMGLNGQKL 262
>gi|294873439|ref|XP_002766628.1| CUG triplet repeat RNA-binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239867660|gb|EEQ99345.1| CUG triplet repeat RNA-binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 372
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 20 PPHSRLFILCGKDV-TEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
P + +FI D TE DLRQ F FGNI + V D+ TG S+G +I + A +
Sbjct: 274 PAGANIFIFSVPDAWTEMDLRQHFGLFGNIVSAKVVVDKQTGISRGYGFISYDNCDSAER 333
Query: 79 AVEEMNGEFLPNHSKPIKVLI 99
AV+ M+G P K IKV I
Sbjct: 334 AVQTMDGYMAPTGRK-IKVQI 353
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 45 FGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIA 100
+G I E+ +KDR T ES+G+A++RF +E A+ +NG LP ++P+ V+ A
Sbjct: 7 YGGIDEVFIMKDRETQESRGLAFVRFRDLAEGQNAIAALNGTTLPESARPLTVIYA 62
>gi|606976|gb|AAA81375.1| ribonucleoprotein [Xenopus laevis]
Length = 462
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 1 MDRNYRINTHDRSREYNDEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNT 59
M+R ++ D D +LF+ + GK T++D+R+ F PFGNI E ++ +
Sbjct: 77 MNRPIQVKPADSESRGEDR----KLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGPD- 131
Query: 60 GESKGVAYIRFSKTSEAAKAVEEMNGE-FLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQ 118
G SKG A+++F +EA A+ ++G LP S + V+ A E + G R Q+++ Q
Sbjct: 132 GTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSL-VVKFADTEKERGLRRMQQVANQ 190
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 19 EPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
EP +LFI +++ E DL+ F FG I E+ +KD+ TG KG A++ + A
Sbjct: 3 EPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESAL 62
Query: 78 KAVEEMNGE-FLPNHSKPIKV 97
KA ++ + LP ++PI+V
Sbjct: 63 KAQSALHEQKTLPGMNRPIQV 83
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
++ T+ ++ Q F PFGN+ + DR T +SK ++ F A A++ MNG
Sbjct: 386 QEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQAMNG 440
>gi|410961884|ref|XP_003987508.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Felis catus]
Length = 411
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 240 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFEL--A 297
Query: 92 SKPIKV 97
+P++V
Sbjct: 298 GRPMRV 303
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 148 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 191
>gi|410218750|gb|JAA06594.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307726|gb|JAA32463.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 426
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 257 NITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLNGFELA-- 314
Query: 92 SKPIKV 97
+P++V
Sbjct: 315 GRPMRV 320
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 165 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 208
>gi|357144285|ref|XP_003573237.1| PREDICTED: uncharacterized protein LOC100845208 [Brachypodium
distachyon]
Length = 233
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 19 EPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
E P + + CG +V +D L + FS F + + V+D+ TG++KG ++ FS ++
Sbjct: 119 EWPDNDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFVSFSNPTD 178
Query: 76 AAKAVEEMNGEFLPNHSKPIKV 97
A A++EMNG+++ N +PIK+
Sbjct: 179 LAAAIKEMNGKYVGN--RPIKL 198
>gi|147907254|ref|NP_001079936.1| CUGBP Elav-like family member 3-A [Xenopus laevis]
gi|152013388|sp|Q91579.2|CEL3A_XENLA RecName: Full=CUGBP Elav-like family member 3-A; Short=CELF-3A;
AltName: Full=Bruno-like protein 1-A; AltName:
Full=CUG-BP- and ETR-3-like factor 3-A; AltName:
Full=ELAV-type RNA-binding protein 1-A; Short=ETR-1-A;
AltName: Full=RNA-binding protein BRUNOL-1-A; AltName:
Full=Trinucleotide repeat-containing gene 4 protein A
gi|34785486|gb|AAH57704.1| Etr-1 protein [Xenopus laevis]
gi|47937574|gb|AAH72134.1| Etr-1 protein [Xenopus laevis]
Length = 462
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 1 MDRNYRINTHDRSREYNDEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNT 59
M+R ++ D D +LF+ + GK T++D+R+ F PFGNI E ++ +
Sbjct: 77 MNRPIQVKPADSESRGEDR----KLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGPD- 131
Query: 60 GESKGVAYIRFSKTSEAAKAVEEMNGE-FLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQ 118
G SKG A+++F +EA A+ ++G LP S + V+ A E + G R Q+++ Q
Sbjct: 132 GTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSL-VVKFADTEKERGLRRMQQVANQ 190
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 19 EPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
EP +LFI +++ E DL+ F FG I E+ +KD+ TG KG A++ + A
Sbjct: 3 EPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESAL 62
Query: 78 KAVEEMNGE-FLPNHSKPIKV 97
KA ++ + LP ++PI+V
Sbjct: 63 KAQSALHEQKTLPGMNRPIQV 83
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
++ T+ ++ Q F PFGN+ + DR T +SK ++ F A A++ MNG
Sbjct: 386 QEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQAMNG 440
>gi|328792887|ref|XP_624017.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Apis
mellifera]
Length = 367
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 22 HSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
H +F+ ++ LR+ F+PFG I + R V+D T +SKG ++ F K +EA A+
Sbjct: 54 HYHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFVKKAEAESAI 113
Query: 81 EEMNGEFL 88
MNG++L
Sbjct: 114 GAMNGQWL 121
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 10/68 (14%)
Query: 16 YNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
YN P + + CG +TE+ +++ FSPFG+IQEIR KD KG A+IRFS
Sbjct: 153 YNQSSP-TNCTVYCGGLTNGLTEELMQKTFSPFGSIQEIRVFKD------KGYAFIRFST 205
Query: 73 TSEAAKAV 80
A A+
Sbjct: 206 KESATHAI 213
>gi|410261840|gb|JAA18886.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349769|gb|JAA41488.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349773|gb|JAA41490.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 426
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 257 NITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLNGFELAG- 315
Query: 92 SKPIKV 97
+P++V
Sbjct: 316 -RPMRV 320
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 165 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 208
>gi|357610697|gb|EHJ67099.1| TIA-1-related RNA binding protein [Danaus plexippus]
Length = 388
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+++ ++N T ++ D H +F+ ++ LR+ F+PFG I R V+D
Sbjct: 72 LEKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILREAFAPFGEISNCRIVRDP 131
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
T +SKG A++ F K ++A A++ MNG++L
Sbjct: 132 QTLKSKGYAFVSFVKKADAEAAIQAMNGQWL 162
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 16 YNDEPPHSRLFILCG----KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
YN P + + CG +TE+ ++ FS FG IQ++R +D KG A+IRF+
Sbjct: 200 YNQSSP-TNTTVYCGGFTSNVITEELMQSTFSQFGQIQDVRVFRD------KGYAFIRFT 252
Query: 72 KTSEAAKAVEEMNGEFLPNHS 92
AA A+E + + H+
Sbjct: 253 TKEAAAHAIEATHNTEISGHT 273
>gi|367026720|ref|XP_003662644.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
gi|347009913|gb|AEO57399.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
Length = 500
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG+I E R + D TG S
Sbjct: 161 RVNWAYQSNNSNKEDTSNHFHIFVGDLSNEVNDEVLFQAFSAFGSISEARVMWDMKTGRS 220
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + ++A KA+ M+GE+L
Sbjct: 221 RGYGFVAFRERADAEKALSSMDGEWL 246
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY--IRFSKTSEA 76
P+ R + G D VTED LRQ F G++Q ++ + D+N +KG Y + + A
Sbjct: 87 PNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKN---AKGYNYGFVEYDDPGAA 143
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A++ +NG + H I+V A
Sbjct: 144 ERAMQTLNGRRV--HQSEIRVNWA 165
>gi|410961882|ref|XP_003987507.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Felis catus]
Length = 429
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 258 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFEL--A 315
Query: 92 SKPIKV 97
+P++V
Sbjct: 316 GRPMRV 321
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 166 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 209
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
D+ ++ LRQ F PFG+I + ++D G SKG ++ FS EA KAV EMN + +
Sbjct: 342 DIDDERLRQEFEPFGSITSAKVMRDEK-GTSKGFGFVCFSSPDEATKAVAEMNNKMI--G 398
Query: 92 SKPIKVLIAAKLEFK 106
SKP+ V +A + E +
Sbjct: 399 SKPLYVSLAQRREVR 413
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMN 84
+VT+DD + F FGN+ ++ G+S+G ++ F EA KAVE ++
Sbjct: 239 EVTQDDFVKLFEQFGNVTSA-VIQTDEQGQSRGFGFVNFETHEEAQKAVETLH 290
>gi|301781272|ref|XP_002926047.1| PREDICTED: probable RNA-binding protein 23-like isoform 3
[Ailuropoda melanoleuca]
Length = 412
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 241 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFEL--A 298
Query: 92 SKPIKV 97
+P++V
Sbjct: 299 GRPMRV 304
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 149 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 192
>gi|293332827|ref|NP_001169335.1| uncharacterized protein LOC100383202 [Zea mays]
gi|224028769|gb|ACN33460.1| unknown [Zea mays]
gi|413918115|gb|AFW58047.1| hypothetical protein ZEAMMB73_457780 [Zea mays]
Length = 714
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 35 EDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKP 94
+D L FS FG+I + +KDRNTG+SKG ++++S SEA A+ MNG L +
Sbjct: 433 DDGLVSLFSQFGDIVMAKVIKDRNTGQSKGYGFVKYSDVSEANAAIAAMNGHHL--EGRV 490
Query: 95 IKVLIAAK 102
I V +A K
Sbjct: 491 IAVRVAGK 498
>gi|183221265|ref|YP_001839261.1| RNA binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
gi|189911356|ref|YP_001962911.1| RNA-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167776032|gb|ABZ94333.1| RNA-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167779687|gb|ABZ97985.1| RNA binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 89
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+ E+++RQ FS +G IQ+++ + DR TG +G A+I ++ SEA +AV +MNG+ P
Sbjct: 15 LKEENIRQIFSVYGAIQDLKMIHDRETGNFRGFAFITYASPSEAEEAVAQMNGQ--PIDG 72
Query: 93 KPIKVLIA 100
+ +KV A
Sbjct: 73 RNLKVTFA 80
>gi|170574509|ref|XP_001892845.1| polyadenylate-binding protein 4 [Brugia malayi]
gi|158601405|gb|EDP38326.1| polyadenylate-binding protein 4, putative [Brugia malayi]
Length = 462
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
V +D L+Q F +G I + + D N G SKG ++ F K EA KAV EMNG+ + +
Sbjct: 315 VNDDILKQNFEAYGKITSAKVMCDDN-GRSKGFGFVCFEKPDEATKAVTEMNGKMMC--T 371
Query: 93 KPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARD--KFHGFAYPPG 140
KP+ V +A + E ++ +++ QY ++ + HG Y PG
Sbjct: 372 KPLYVALAQRKEDRKA-----QLASQYMQRLASIRMHNAGTMHGTVYTPG 416
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DVTE L + FS G + IR +D T S G AY+ F + ++A +A++ MN + + +
Sbjct: 28 DVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALDTMNFDMM--Y 85
Query: 92 SKPIKVLIAAK 102
KPI+++ + +
Sbjct: 86 GKPIRIMWSQR 96
>gi|380814242|gb|AFE78995.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
gi|383419605|gb|AFH33016.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 425
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 257 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFEL--A 314
Query: 92 SKPIKV 97
+P++V
Sbjct: 315 GRPMRV 320
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 165 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 208
>gi|66821129|ref|XP_644081.1| RNA recognition motif-containing protein RRM [Dictyostelium
discoideum AX4]
gi|60472201|gb|EAL70154.1| RNA recognition motif-containing protein RRM [Dictyostelium
discoideum AX4]
Length = 904
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 17 NDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
N + P + LFI DVT+D LR+ F PFG I E + + D N G+SK ++RFS +
Sbjct: 191 NSKYPSNNLFIKPLPYDVTDDQLRKLFEPFGKIIECKVMLDHN-GQSKFAGFVRFSSELD 249
Query: 76 AAKAVEEMNGEFLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQY 119
A+KA++ MNG + S V+ A E ++ R +K+ Y
Sbjct: 250 ASKAIDAMNGVRINKDSGYPLVVKYADTEQQKISRKQRKMQTIY 293
Score = 53.9 bits (128), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
V + L Q FS FG +Q +R + D++TGE+KG +++F +T EA K +EMNG
Sbjct: 780 VDDSYLFQLFSQFGKLQSVRVITDKDTGENKGYGFVKFYQTDEALKCQKEMNG 832
Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
+ ++DL FS +G + + + D G S G ++RFS E+A A+EE++G
Sbjct: 119 EFNDEDLENLFSKYGKVLSSKVMIDPK-GNSYGYGFVRFSSPQESAAAIEELDG 171
>gi|62733051|gb|AAX95168.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77549578|gb|ABA92375.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|222615796|gb|EEE51928.1| hypothetical protein OsJ_33542 [Oryza sativa Japonica Group]
Length = 465
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 20 PPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PP + G +D TE+DLR+ FG I E+R +KD+ T E+KG A++ F+ A
Sbjct: 100 PPQGSEVFIGGLPRDTTEEDLRELCDSFGEIYEVRLMKDKETKENKGFAFVNFTAKEAAQ 159
Query: 78 KAVEEMN 84
+A+EE++
Sbjct: 160 RAIEELH 166
>gi|41152034|ref|NP_958453.1| polyadenylate-binding protein 4 [Danio rerio]
gi|31419252|gb|AAH53126.1| Poly(A) binding protein, cytoplasmic 4 (inducible form) [Danio
rerio]
Length = 637
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 8/122 (6%)
Query: 25 LFILCGKDVTEDD-LRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
L+I D +D+ LR+ FSPFG+I + + + G SKG ++ FS EA KAV EM
Sbjct: 297 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEM 354
Query: 84 NGEFLPNHSKPIKVLIAAKLEFKEGYRGG---QKISVQYTSPQSAAYARDKFHGFAYPPG 140
NG + SKP+ V +A + E ++ + Q+I+ P +A + + G + P
Sbjct: 355 NGRIV--GSKPLYVALAQRKEERKAHLTNQYMQRIAGMRAMPANAIINQFQPAGGYFMPA 412
Query: 141 IP 142
+P
Sbjct: 413 VP 414
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
D+TE L + FSP G + IR +D T S G AY+ F + ++A +A++ MN + +
Sbjct: 22 DITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVV--K 79
Query: 92 SKPIKVLIAAK 102
KPI+++ + +
Sbjct: 80 GKPIRIMWSQR 90
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
G D+ + L++ F +G ++ + D TG+S+G ++ + K +A KAVEEMNG L
Sbjct: 200 GDDMDDQRLKELFDKYGKTLSVKVMTD-PTGKSRGFGFVSYEKHEDANKAVEEMNGTEL 257
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
K + L FS FGNI + V D N SKG A++ F A +A+E+MNG L
Sbjct: 109 KSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLL 164
>gi|402875680|ref|XP_003901625.1| PREDICTED: probable RNA-binding protein 23 [Papio anubis]
Length = 497
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 328 NITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLNGFELAG- 386
Query: 92 SKPIKV 97
+P++V
Sbjct: 387 -RPMRV 391
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 236 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 279
>gi|384947948|gb|AFI37579.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 425
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 257 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFEL--A 314
Query: 92 SKPIKV 97
+P++V
Sbjct: 315 GRPMRV 320
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 165 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 208
>gi|383419607|gb|AFH33017.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 441
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 273 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 331
Query: 92 SKPIKV 97
+P++V
Sbjct: 332 -RPMRV 336
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 181 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 224
>gi|367051094|ref|XP_003655926.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
gi|347003190|gb|AEO69590.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
Length = 500
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 161 RVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRS 220
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + ++A KA+ M+GE+L
Sbjct: 221 RGYGFVAFRERADAEKALSSMDGEWL 246
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
P+ R + G D VTED LRQ F G++Q ++ + D+N ++ + A +
Sbjct: 87 PNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKNA-RGYNYGFVEYDDPGAAER 145
Query: 79 AVEEMNGEFLPNHSKPIKVLIA 100
A++ +NG + H I+V A
Sbjct: 146 AMQTLNGRRV--HQSEIRVNWA 165
>gi|242015973|ref|XP_002428613.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
gi|212513276|gb|EEB15875.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
Length = 593
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I+ + D TG SKG +I F +A KA+E++NG L
Sbjct: 275 NITEDMLRGIFEPFGKIDSIQLIMDPETGRSKGYGFITFHSADDAKKALEQLNGFELA-- 332
Query: 92 SKPIKV 97
+P+KV
Sbjct: 333 GRPMKV 338
>gi|114652071|ref|XP_522797.2| PREDICTED: probable RNA-binding protein 23 isoform 12 [Pan
troglodytes]
Length = 408
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 239 NITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLNGFELAG- 297
Query: 92 SKPIKV 97
+P++V
Sbjct: 298 -RPMRV 302
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 147 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 190
>gi|59858555|ref|NP_001012304.1| RNA-binding protein 39 [Danio rerio]
gi|27882534|gb|AAH44487.1| RNA binding motif protein 39a [Danio rerio]
gi|182892014|gb|AAI65689.1| Rbm39a protein [Danio rerio]
Length = 523
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I+ + D TG SKG +I FS A KA+E++NG L
Sbjct: 256 NITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFITFSDAECAKKALEQLNGFEL--A 313
Query: 92 SKPIKV 97
+P+KV
Sbjct: 314 GRPMKV 319
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AYI F ++ A+
Sbjct: 164 DLEEFFSAVGKVRDVRIISDRNSRRSKGIAYIEFVDSTSVPLAI 207
>gi|410961880|ref|XP_003987506.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Felis catus]
Length = 445
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 274 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFEL--A 331
Query: 92 SKPIKV 97
+P++V
Sbjct: 332 GRPMRV 337
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 182 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 225
>gi|387539272|gb|AFJ70263.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 439
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 273 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 331
Query: 92 SKPIKV 97
+P++V
Sbjct: 332 -RPMRV 336
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 181 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 224
>gi|355693134|gb|EHH27737.1| hypothetical protein EGK_18008 [Macaca mulatta]
Length = 441
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 273 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 331
Query: 92 SKPIKV 97
+P++V
Sbjct: 332 -RPMRV 336
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 181 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 224
>gi|114652057|ref|XP_001159475.1| PREDICTED: probable RNA-binding protein 23 isoform 10 [Pan
troglodytes]
Length = 442
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 273 NITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLNGFELAG- 331
Query: 92 SKPIKV 97
+P++V
Sbjct: 332 -RPMRV 336
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 181 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 224
>gi|12803481|gb|AAH02566.1| RNA binding motif protein 23 [Homo sapiens]
gi|189055004|dbj|BAG37988.1| unnamed protein product [Homo sapiens]
gi|312151810|gb|ADQ32417.1| RNA binding motif protein 23 [synthetic construct]
Length = 424
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 257 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 315
Query: 92 SKPIKV 97
+P++V
Sbjct: 316 -RPMRV 320
Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 165 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 208
>gi|384496545|gb|EIE87036.1| hypothetical protein RO3G_11747 [Rhizopus delemar RA 99-880]
Length = 616
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 56/121 (46%), Gaps = 16/121 (13%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
D+ ++ LRQ FS +G I + + D G SKG ++ FS EA KAV EMNG +
Sbjct: 333 DIDDEKLRQEFSVYGVITSAKVMCDEK-GTSKGFGFVCFSSPDEATKAVTEMNGRMI--G 389
Query: 92 SKPIKVLIAAKLEFKEGYRGGQ-----KISVQYTSPQSAAYARDKFHGFAYPPGIPMVVV 146
SKPI V +A + E + Q ++ +Q P A Y PG PM
Sbjct: 390 SKPIYVALAQRKEVRRSQLEAQMAQRNQMRMQQGMPMPGAP--------GYMPGAPMFYA 441
Query: 147 P 147
P
Sbjct: 442 P 442
>gi|335310533|ref|XP_003362077.1| PREDICTED: probable RNA-binding protein 23 [Sus scrofa]
Length = 443
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG
Sbjct: 275 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 328
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 183 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 226
>gi|332222974|ref|XP_003260644.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Nomascus
leucogenys]
Length = 426
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 257 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 315
Query: 92 SKPIKV 97
+P++V
Sbjct: 316 -RPMRV 320
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 165 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 208
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 9 THDRSREYNDEPPHSRLFILCGK---DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGV 65
++DR ++Y D P + G D T+D + + F +G+I +R DR TG KG
Sbjct: 345 SNDRQKQYGDTPSQPSATLFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRETGAPKGF 404
Query: 66 AYIRFSKTSEAAKAVEEMNG 85
Y+ FS EA A+E + G
Sbjct: 405 GYVEFSSIEEAKSAMENLTG 424
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 3 RNYRINTHDRSREYNDEPPHSRLFILCGK---DVTEDDLRQGFSPFGNIQEIRCVKDRNT 59
R + S++ E P + + G +V E+ L + F FG I+ +R + DR++
Sbjct: 231 RKAEAEPEETSKKTKTEDPAATGNLFVGNLSWNVDEEWLTREFEEFGAIKAVRVITDRDS 290
Query: 60 GESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
G SKG Y+ F +AAKA+E +G L N
Sbjct: 291 GRSKGYGYVEFESADDAAKALEARHGYTLDNR 322
>gi|112734730|ref|NP_001036780.1| sex-lethal isoform L [Bombyx mori]
gi|77379388|gb|ABA71351.1| sex-lethal isoform 1 [Bombyx mori]
Length = 336
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+D L F +G I + ++D+N+G +GVA++R+ K EA +A+ +N
Sbjct: 158 RAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEAIAALNNVIPEG 217
Query: 91 HSKPIKVLIA-----AKLEFKEGYRGG-QKISVQYTSPQSAAYARDKFHGFAYPPGIPMV 144
++P+ V +A K + G+ G Q+ Y+ + + + GF PP +
Sbjct: 218 GTEPLSVKVAEEHGKQKAAYYAGWSAGYQQNRGDYSWNCNTCPPPEAWEGFPPPP--LLE 275
Query: 145 VVPDFSYGLPRNGASALGGNAALSVVDSKGALQSLTKALAQATSLLRSAGLSTDSRF 201
VP+ P+NG N V K A + + +L + G++TD RF
Sbjct: 276 SVPN----TPKNGCRPGVCNRPPYSVPGKVANRG-----GRGRNLPWAPGVNTDERF 323
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++TE DL F G I+ R +KD TG S G ++ F++ +AA+A++ NG L N
Sbjct: 72 QNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRN 131
Query: 91 HSKPIKVLIA 100
K +KV A
Sbjct: 132 --KRLKVSYA 139
>gi|348522243|ref|XP_003448635.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Oreochromis niloticus]
Length = 387
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 1 MDRNYRINTHDR-SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRN 58
M + ++N + + D H +F+ ++T +D++ F PFG I + R VKD
Sbjct: 73 MGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFGPFGRISDARVVKDMA 132
Query: 59 TGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
TG+SKG ++ F +A A++ M G++L
Sbjct: 133 TGKSKGYGFVSFFNKWDAENAIQHMGGQWL 162
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 23 SRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
S + CG +TE +RQ FSPFG I E+R D KG +++RF+ AA A
Sbjct: 202 SNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEVRVFPD------KGYSFVRFNSHESAAHA 255
Query: 80 VEEMNGEFLPNH 91
+ +NG + H
Sbjct: 256 IVSVNGSSIEGH 267
>gi|125533975|gb|EAY80523.1| hypothetical protein OsI_35702 [Oryza sativa Indica Group]
Length = 468
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 20 PPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PP + G +D TE+DLR+ FG I E+R +KD+ T E+KG A++ F+ A
Sbjct: 103 PPQGSEVFIGGLPRDTTEEDLRELCDSFGEIYEVRLMKDKETKENKGFAFVNFTAKDAAQ 162
Query: 78 KAVEEMN 84
+A+EE++
Sbjct: 163 RAIEELH 169
>gi|407929404|gb|EKG22234.1| hypothetical protein MPH_00413 [Macrophomina phaseolina MS6]
Length = 159
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 23 SRLFILCGKDVTED-DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
S+LFI T+D LRQ F FG ++E VKDR+TG S+G ++RF++ S+A A++
Sbjct: 2 SKLFIGGLAWHTDDATLRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRFTQESDAEAAIQ 61
Query: 82 EMN 84
MN
Sbjct: 62 AMN 64
>gi|397473311|ref|XP_003808158.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Pan paniscus]
Length = 426
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 257 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 315
Query: 92 SKPIKV 97
+P++V
Sbjct: 316 -RPMRV 320
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 165 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 208
>gi|321472566|gb|EFX83536.1| hypothetical protein DAPPUDRAFT_194972 [Daphnia pulex]
Length = 366
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ ++ + D TG SKG +I F +A KA+E++NG L
Sbjct: 120 NITEDMLRSIFEPFGKIEHMQLMIDTETGRSKGYGFITFRNAEDAKKAMEQLNGFELA-- 177
Query: 92 SKPIKV 97
+P+K+
Sbjct: 178 GRPMKI 183
>gi|301781270|ref|XP_002926046.1| PREDICTED: probable RNA-binding protein 23-like isoform 2
[Ailuropoda melanoleuca]
Length = 430
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 259 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFEL--A 316
Query: 92 SKPIKV 97
+P++V
Sbjct: 317 GRPMRV 322
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 167 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 210
>gi|261858408|dbj|BAI45726.1| RNA binding motif protein 23 [synthetic construct]
Length = 406
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 239 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 297
Query: 92 SKPIKV 97
+P++V
Sbjct: 298 -RPMRV 302
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 147 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 190
>gi|388490330|ref|NP_001253303.1| probable RNA-binding protein 23 [Macaca mulatta]
gi|380814244|gb|AFE78996.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
gi|384947950|gb|AFI37580.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 441
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 273 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 331
Query: 92 SKPIKV 97
+P++V
Sbjct: 332 -RPMRV 336
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 181 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 224
>gi|440792905|gb|ELR14112.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 458
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 24 RLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI K +TE + F+PFGN+ E+ +++R TGES+G A++ + A A+E
Sbjct: 105 KLFIGQLPKSMTEPYIGPLFAPFGNLVEVAIIRNRATGESRGCAFVTYDNADSAELAIET 164
Query: 83 M-NGEFLPNHSKPIKV 97
+ N + LP + PI+V
Sbjct: 165 LHNKQTLPGMTSPIQV 180
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 24 RLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI + + V ED LR F P+G+I E+ +++ + G S+G A++++ + +A A+
Sbjct: 213 KLFIGMLPRTVGEDGLRAIFQPYGSIIEVVVLREPD-GSSRGCAFVKYHRREDAVNAINA 271
Query: 83 MNGE-FLPNHSKPIKVLIA 100
NG+ F + P+ V A
Sbjct: 272 CNGQMFFQGQTNPLTVKFA 290
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 20 PPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
PP + LFI + DL FSPFG I ++ D+ T SKG ++ ++ A
Sbjct: 372 PPGANLFIYHLPTHYGDGDLLTLFSPFGQILSVKVFLDKMTMVSKGFGFVSYASADSARL 431
Query: 79 AVEEMNG 85
A+E M+G
Sbjct: 432 AIENMDG 438
>gi|7022544|dbj|BAA91638.1| unnamed protein product [Homo sapiens]
Length = 406
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 239 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 297
Query: 92 SKPIKV 97
+P++V
Sbjct: 298 -RPMRV 302
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 147 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 190
>gi|345804022|ref|XP_003435135.1| PREDICTED: probable RNA-binding protein 23 [Canis lupus familiaris]
Length = 411
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 240 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFEL--A 297
Query: 92 SKPIKV 97
+P++V
Sbjct: 298 GRPMRV 303
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 148 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 191
>gi|332222976|ref|XP_003260645.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Nomascus
leucogenys]
Length = 442
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 273 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 331
Query: 92 SKPIKV 97
+P++V
Sbjct: 332 -RPMRV 336
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 181 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 224
>gi|290563184|ref|NP_001166854.1| sex-lethal isoform S [Bombyx mori]
gi|89885657|dbj|BAE86939.1| sex-lethal [Bombyx mori]
Length = 290
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 17/175 (9%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+T+D L F +G I + ++D+N+G +GVA++R+ K EA +A+ +N +
Sbjct: 114 ITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEAIAALNNVIPEGGT 173
Query: 93 KPIKVLIA-----AKLEFKEGYRGG-QKISVQYTSPQSAAYARDKFHGFAYPPGIPMVVV 146
+P+ V +A K + G+ G Q+ Y+ + + + GF PP + V
Sbjct: 174 EPLSVKVAEEHGKQKAAYYAGWSAGYQQNRGDYSWNCNTCPPPEAWEGFPPPP--LLESV 231
Query: 147 PDFSYGLPRNGASALGGNAALSVVDSKGALQSLTKALAQATSLLRSAGLSTDSRF 201
P+ P+NG N V K A + + +L + G++TD RF
Sbjct: 232 PN----TPKNGCRPGVCNRPPYSVPGKVANRG-----GRGRNLPWAPGVNTDERF 277
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++TE DL F G I+ R +KD TG S G ++ F++ +AA+A++ NG L N
Sbjct: 26 QNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRN 85
>gi|426376374|ref|XP_004054976.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Gorilla
gorilla gorilla]
Length = 403
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 239 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFEL--A 296
Query: 92 SKPIKV 97
+P++V
Sbjct: 297 GRPMRV 302
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 147 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 190
>gi|426376372|ref|XP_004054975.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Gorilla
gorilla gorilla]
Length = 437
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 273 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 331
Query: 92 SKPIKV 97
+P++V
Sbjct: 332 -RPMRV 336
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 181 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 224
>gi|403222792|dbj|BAM40923.1| RNA splicing factor [Theileria orientalis strain Shintoku]
Length = 649
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 18 DEPPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
D P + L G +++E DL+Q F+PFGN+ E+ ++ + G SKG AY+RF + +E
Sbjct: 424 DNPTTVMVSNLVGVLSNLSEGDLQQLFAPFGNVAEVAVARN-DLGLSKGYAYVRFKRWTE 482
Query: 76 AAKAVEEMNGEFLPNHSKPIKV 97
A +A+ MNG + +PIKV
Sbjct: 483 AREALNVMNGFDIS--GQPIKV 502
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 33 VTEDDLRQGFSPF-GNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
V E D+ + FS G +++I+ V+D +G SKG+AY+ F KA+ MNG
Sbjct: 336 VDERDIYELFSEHAGKVRDIQLVRDSRSGRSKGIAYVEFYTQESVIKAL-SMNG 388
>gi|119586630|gb|EAW66226.1| RNA binding motif protein 23, isoform CRA_e [Homo sapiens]
Length = 449
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 283 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 341
Query: 92 SKPIKV 97
+P++V
Sbjct: 342 -RPMRV 346
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 191 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 234
>gi|119586634|gb|EAW66230.1| RNA binding motif protein 23, isoform CRA_h [Homo sapiens]
Length = 467
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 301 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 359
Query: 92 SKPIKV 97
+P++V
Sbjct: 360 -RPMRV 364
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 209 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 252
>gi|444728803|gb|ELW69245.1| putative RNA-binding protein 23 [Tupaia chinensis]
Length = 450
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 261 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 319
Query: 92 SKPIKV 97
+P++V
Sbjct: 320 -RPMRV 324
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 169 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 212
>gi|426376370|ref|XP_004054974.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Gorilla
gorilla gorilla]
Length = 421
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 257 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 315
Query: 92 SKPIKV 97
+P++V
Sbjct: 316 -RPMRV 320
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 165 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 208
>gi|397473315|ref|XP_003808160.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Pan paniscus]
Length = 408
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 239 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 297
Query: 92 SKPIKV 97
+P++V
Sbjct: 298 -RPMRV 302
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 147 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 190
>gi|197102126|ref|NP_001124751.1| probable RNA-binding protein 23 [Pongo abelii]
gi|55725769|emb|CAH89665.1| hypothetical protein [Pongo abelii]
Length = 423
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 257 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFEL--A 314
Query: 92 SKPIKV 97
+P++V
Sbjct: 315 GRPMRV 320
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 165 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 208
>gi|387539270|gb|AFJ70262.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 423
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 257 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 315
Query: 92 SKPIKV 97
+P++V
Sbjct: 316 -RPMRV 320
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 165 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 208
>gi|259488599|tpe|CBF88164.1| TPA: nuclear and cytoplasmic polyadenylated RNA-binding protein
pub1 (AFU_orthologue; AFUA_1G12000) [Aspergillus
nidulans FGSC A4]
Length = 477
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 163 RVNWAYQSNTANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRS 222
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + ++A KA+ M+GE+L
Sbjct: 223 RGYGFVAFRERADAEKALTSMDGEWL 248
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY--IRFSKTSEA 76
P+ R + G D VTED L+Q F G++ ++ + D+N SKG Y + F A
Sbjct: 87 PNKRALYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNF-NSKGANYGFVEFDDPGAA 145
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A++ +NG + H I+V A
Sbjct: 146 ERAMQTLNGRRI--HQSEIRVNWA 167
>gi|89885655|dbj|BAE86938.1| sex-lethal [Bombyx mori]
Length = 336
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+D L F +G I + ++D+N+G +GVA++R+ K EA +A+ +N
Sbjct: 158 RAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEAIAALNNVIPEG 217
Query: 91 HSKPIKVLIA-----AKLEFKEGYRGG-QKISVQYTSPQSAAYARDKFHGFAYPPGIPMV 144
++P+ V +A K + G+ G Q+ Y+ + + + GF PP +
Sbjct: 218 GTEPLSVKVAEEHGKQKAAYYAGWSAGYQQNRGDYSWNCNTCPPPEAWEGFPPPP--LLE 275
Query: 145 VVPDFSYGLPRNGASALGGNAALSVVDSKGALQSLTKALAQATSLLRSAGLSTDSRF 201
VP+ P+NG N V K A + + +L + G++TD RF
Sbjct: 276 SVPN----TPKNGCRPGVCNRPPYSVPGKVANRG-----GRGRNLPWAPGVNTDERF 323
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++TE DL F G I+ R +KD TG S G ++ F++ +AA+A++ NG L N
Sbjct: 72 QNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRN 131
Query: 91 HSKPIKVLIA 100
K +KV A
Sbjct: 132 --KRLKVSYA 139
>gi|4098582|gb|AAD00328.1| RBM1 [Sminthopsis macroura]
Length = 390
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 24 RLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LFI + E L F +G I E+ +KDR T +S+G A+I F ++A A +
Sbjct: 9 KLFIGGLNTETNEKGLESVFGKYGRIVEVLLMKDRETNKSRGFAFITFESPADAKDAARD 68
Query: 83 MNGEFLPNHSKPIKVLIAAKLEFKEGYRGGQ 113
MNG+ L K IKV A K F+ G R GQ
Sbjct: 69 MNGKSL--DGKSIKVEQATKPSFESGGRRGQ 97
>gi|119586626|gb|EAW66222.1| RNA binding motif protein 23, isoform CRA_a [Homo sapiens]
Length = 483
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 317 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 375
Query: 92 SKPIKV 97
+P++V
Sbjct: 376 -RPMRV 380
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 225 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 268
>gi|73962355|ref|XP_848788.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Canis lupus
familiaris]
Length = 429
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 258 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFEL--A 315
Query: 92 SKPIKV 97
+P++V
Sbjct: 316 GRPMRV 321
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 166 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 209
>gi|301781268|ref|XP_002926045.1| PREDICTED: probable RNA-binding protein 23-like isoform 1
[Ailuropoda melanoleuca]
Length = 446
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 275 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFEL--A 332
Query: 92 SKPIKV 97
+P++V
Sbjct: 333 GRPMRV 338
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 183 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 226
>gi|116734698|ref|NP_001070820.1| probable RNA-binding protein 23 isoform 3 [Homo sapiens]
gi|119586628|gb|EAW66224.1| RNA binding motif protein 23, isoform CRA_c [Homo sapiens]
Length = 405
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 239 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 297
Query: 92 SKPIKV 97
+P++V
Sbjct: 298 -RPMRV 302
Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 147 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 190
>gi|116734694|ref|NP_060577.3| probable RNA-binding protein 23 isoform 2 [Homo sapiens]
gi|18848317|gb|AAH24208.1| RNA binding motif protein 23 [Homo sapiens]
gi|119586627|gb|EAW66223.1| RNA binding motif protein 23, isoform CRA_b [Homo sapiens]
gi|119586633|gb|EAW66229.1| RNA binding motif protein 23, isoform CRA_b [Homo sapiens]
Length = 423
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 257 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 315
Query: 92 SKPIKV 97
+P++V
Sbjct: 316 -RPMRV 320
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 165 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 208
>gi|73962357|ref|XP_537365.2| PREDICTED: probable RNA-binding protein 23 isoform 1 [Canis lupus
familiaris]
Length = 445
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG
Sbjct: 274 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 327
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 182 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 225
>gi|298710156|emb|CBJ31866.1| trinucleotide repeat containing 4, isoform CRA_d [Ectocarpus
siliculosus]
Length = 494
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 20 PPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
PP + LFI +D+++ DL F+PFG++ + DR +GESKG ++ +S S A
Sbjct: 367 PPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSLPSHAEA 426
Query: 79 AVEEMNG 85
A+ +MNG
Sbjct: 427 AIAQMNG 433
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 23 SRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
++LF+ + K ED++R F+P+G ++EI +++++ G +KG A+++++ A A+E
Sbjct: 131 NKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQD-GTNKGCAFVKYTTRQSALDAIE 189
Query: 82 EMNGEF-LPNHSKPIKVLIA 100
++ ++ + +P+ V A
Sbjct: 190 ALHEQYTMQGGPRPLVVKFA 209
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGE 86
K + E+DLR F FG I ++ ++D+ +G +G A++ + A A+ ++G+
Sbjct: 53 KHMEEEDLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCARVSADAAIAALHGQ 108
>gi|57997079|emb|CAB66834.2| hypothetical protein [Homo sapiens]
Length = 631
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+ ++ LR+ FSPFG I + + + G SKG ++ FS EA KAV EMNG + +
Sbjct: 305 IDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIV--AT 360
Query: 93 KPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPGIPMVVVP 147
KP+ V +A + E ++ Y ++ +Y Q A R + A P G M VP
Sbjct: 361 KPLYVALAQRKEERQAY-----LTNEYM--QRMASVRAVPNQRAPPSGYFMTAVP 408
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DVTE L + FSP G I IR +D T S AY+ F T +A A++ MN + +
Sbjct: 21 DVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVI--K 78
Query: 92 SKPIKVLIAAK 102
KP++++ + +
Sbjct: 79 GKPVRIMWSQR 89
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
G+D+ ++ L+ F FG + + D +G+SKG ++ F + +A KAV+EMNG+ L
Sbjct: 199 GEDMDDERLKDLFGKFGPALSVELMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKEL 256
>gi|392595814|gb|EIW85137.1| polyadenylate binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 683
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DV +D LR F PFG I + + D G SKG ++ FS EA KA+ EMN + +
Sbjct: 339 DVDDDKLRAEFEPFGTITSCKVMSDEK-GSSKGFGFVCFSSPDEATKAIAEMNNKMI--G 395
Query: 92 SKPIKVLIAAKLEFK 106
SKP+ V +A + E +
Sbjct: 396 SKPLYVSLAQRREVR 410
>gi|345324102|ref|XP_001514793.2| PREDICTED: nucleolysin TIAR-like [Ornithorhynchus anatinus]
Length = 452
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 167 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 226
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 227 NKLDAENAIVHMGGQWL 243
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 287 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 340
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 341 NGTTIEGH 348
>gi|209154564|gb|ACI33514.1| RNA-binding protein 39 [Salmo salar]
Length = 525
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TE+ LR F PFG I+ I+ + D TG SKG +I FS T A KA++++NG L
Sbjct: 259 NITEEMLRGIFEPFGKIESIQLMMDSETGRSKGYGFITFSDTECAKKALDQLNGFELA-- 316
Query: 92 SKPIKV 97
+P+KV
Sbjct: 317 GRPMKV 322
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL + FS G ++++R + DRN+ SKG+AYI F + + A+
Sbjct: 165 DLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEANSVPLAI 208
>gi|149756182|ref|XP_001494921.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Equus
caballus]
Length = 412
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 242 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFEL--A 299
Query: 92 SKPIKV 97
+P++V
Sbjct: 300 GRPMRV 305
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 150 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 193
>gi|94967282|ref|YP_589330.1| RNA-binding protein, RNP-1 [Candidatus Koribacter versatilis
Ellin345]
gi|94549332|gb|ABF39256.1| RNA-binding protein, RNP-1 [Candidatus Koribacter versatilis
Ellin345]
Length = 107
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
TEDD+RQ F+P+G + + V DR+TG ++G ++ +EAA A+E +NG
Sbjct: 13 ATEDDIRQLFTPYGKVDSVSLVTDRDTGRARGFGFVEMPNDTEAAAAIEGLNG 65
>gi|11610605|gb|AAG38953.1|AF132026_1 testis-specific poly(A)-binding protein [Homo sapiens]
Length = 631
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+ ++ LR+ FSPFG I + + + G SKG ++ FS EA KAV EMNG + +
Sbjct: 305 IDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIV--AT 360
Query: 93 KPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPGIPMVVVP 147
KP+ V +A + E ++ Y ++ +Y Q A R + A P G M VP
Sbjct: 361 KPLYVALAQRKEERQAY-----LTNEYM--QRMASVRAVPNQRAPPSGYFMTAVP 408
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DVTE L + FSP G I IR +D T S AY+ F T +A A++ MN + +
Sbjct: 21 DVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVI--K 78
Query: 92 SKPIKVLIAAK 102
KP++++ + +
Sbjct: 79 GKPVRIMWSQR 89
Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
G+D+ ++ L+ F FG ++ + D +G+SKG ++ F + +A KAV+EMNG+ L
Sbjct: 199 GEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKEL 256
>gi|116734696|ref|NP_001070819.1| probable RNA-binding protein 23 isoform 1 [Homo sapiens]
gi|34925229|sp|Q86U06.1|RBM23_HUMAN RecName: Full=Probable RNA-binding protein 23; AltName:
Full=RNA-binding motif protein 23; AltName:
Full=RNA-binding region-containing protein 4; AltName:
Full=Splicing factor SF2
gi|28071058|emb|CAD61910.1| unnamed protein product [Homo sapiens]
gi|119586629|gb|EAW66225.1| RNA binding motif protein 23, isoform CRA_d [Homo sapiens]
Length = 439
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 273 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 331
Query: 92 SKPIKV 97
+P++V
Sbjct: 332 -RPMRV 336
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 181 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 224
>gi|82802749|gb|ABB92425.1| PABP3 [Homo sapiens]
Length = 630
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+ ++ LR+ FSPFG I + + + G SKG ++ FS EA KAV EMNG + +
Sbjct: 305 IDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIV--AT 360
Query: 93 KPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPGIPMVVVP 147
KP+ V +A + E ++ Y ++ +Y Q A R + A P G M VP
Sbjct: 361 KPLYVALAQRKEERQAY-----LTNEYM--QRMASVRAVPNQRAPPSGYFMTAVP 408
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DVTE L + FSP G I IR +D T S AY+ F T +A A++ MN + +
Sbjct: 21 DVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVI--K 78
Query: 92 SKPIKVLIAAK 102
KP++++ + +
Sbjct: 79 GKPVRIMWSQR 89
Score = 43.1 bits (100), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
G+D+ ++ L+ F FG ++ + D +G+SKG ++ F + +A KAV+EMNG+ L
Sbjct: 199 GEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKEL 256
>gi|159164100|pdb|2DH7|A Chain A, Solution Structure Of The Second Rna Binding Domain In
Nucleolysin Tiar
Length = 105
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 6 SGQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 65
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 66 NKLDAENAIVHMGGQWL 82
>gi|406861752|gb|EKD14805.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 495
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 160 RVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRS 219
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + +A KA+ M+GE+L
Sbjct: 220 RGYGFVAFRERQDAEKALSSMDGEWL 245
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY--IRFSKTSEA 76
P+ R + G D VTED LRQ F G++Q ++ + D+N SKG Y + + + A
Sbjct: 86 PNKRALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKN---SKGFNYGFVEYDDPAAA 142
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A++ +NG + H I+V A
Sbjct: 143 ERAMQTLNGRRV--HQAEIRVNWA 164
>gi|397473313|ref|XP_003808159.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Pan paniscus]
Length = 442
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 273 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG- 331
Query: 92 SKPIKV 97
+P++V
Sbjct: 332 -RPMRV 336
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 181 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 224
>gi|68073969|ref|XP_678899.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56499509|emb|CAH94054.1| splicing factor, putative [Plasmodium berghei]
Length = 535
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 39/54 (72%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
++TE +L+Q F+PFG+I ++ +D TG+SKG +I+F K SEA +A+ MNG
Sbjct: 267 NITEQELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEAIEAMTVMNG 320
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 35 EDDLRQGFSPF-GNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSK 93
E D+ + FS G +++I+C+KD+ +G+SKGVAY+ F KA+ +NG L N +
Sbjct: 168 ERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQESVIKAL-SVNGYMLKN--R 224
Query: 94 PIKV 97
PIKV
Sbjct: 225 PIKV 228
>gi|45238849|ref|NP_112241.2| polyadenylate-binding protein 3 [Homo sapiens]
gi|28201852|sp|Q9H361.2|PABP3_HUMAN RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3; AltName:
Full=Testis-specific poly(A)-binding protein
gi|20379668|gb|AAH27617.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|119628765|gb|EAX08360.1| poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|123982576|gb|ABM83029.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|123997243|gb|ABM86223.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|189055351|dbj|BAG36140.1| unnamed protein product [Homo sapiens]
Length = 631
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+ ++ LR+ FSPFG I + + + G SKG ++ FS EA KAV EMNG + +
Sbjct: 305 IDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIV--AT 360
Query: 93 KPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPGIPMVVVP 147
KP+ V +A + E ++ Y ++ +Y Q A R + A P G M VP
Sbjct: 361 KPLYVALAQRKEERQAY-----LTNEYM--QRMASVRAVPNQRAPPSGYFMTAVP 408
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DVTE L + FSP G I IR +D T S AY+ F T +A A++ MN + +
Sbjct: 21 DVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVI--K 78
Query: 92 SKPIKVLIAAK 102
KP++++ + +
Sbjct: 79 GKPVRIMWSQR 89
Score = 43.1 bits (100), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
G+D+ ++ L+ F FG ++ + D +G+SKG ++ F + +A KAV+EMNG+ L
Sbjct: 199 GEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKEL 256
>gi|328848768|gb|EGF97966.1| hypothetical protein MELLADRAFT_84111 [Melampsora larici-populina
98AG31]
Length = 695
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 8/77 (10%)
Query: 17 NDEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY-------I 68
ND ++RL++ ++T+DDLRQ F PFG+I+ + +D+ TG+SKG A+ I
Sbjct: 427 NDPNSYARLYVGSLNFNLTDDDLRQVFQPFGDIEYVDLHRDQITGKSKGYAFTLLTCVNI 486
Query: 69 RFSKTSEAAKAVEEMNG 85
RF +A A+E+MNG
Sbjct: 487 RFKNMHDAKNAMEKMNG 503
>gi|327267754|ref|XP_003218664.1| PREDICTED: nucleolysin TIAR-like [Anolis carolinensis]
Length = 342
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 48 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 107
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 108 NKLDAENAIVHMGGQWL 124
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I E R KG +++RFS AA A+ +
Sbjct: 168 VYCGGIASGLTDQLMRQTFSPFGQILETRAF------PGKGYSFVRFSTHESAAHAIVSV 221
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 222 NGTTIEGH 229
>gi|301624539|ref|XP_002941556.1| PREDICTED: RNA-binding protein 39 [Xenopus (Silurana) tropicalis]
Length = 420
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ +K+ +TG SKG +I F+ A +A+E++NG L
Sbjct: 257 NITEDMLRGIFEPFGKIENIQLLKEPDTGRSKGFGFITFTDAECARRALEQLNGFELA-- 314
Query: 92 SKPIKV 97
+P+KV
Sbjct: 315 GRPMKV 320
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F A+
Sbjct: 165 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCDIQSVPLAI 208
>gi|149756180|ref|XP_001494897.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Equus
caballus]
Length = 430
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 260 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFEL--A 317
Query: 92 SKPIKV 97
+P++V
Sbjct: 318 GRPMRV 323
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 168 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 211
>gi|384498450|gb|EIE88941.1| hypothetical protein RO3G_13652 [Rhizopus delemar RA 99-880]
Length = 454
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 19 EPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
EP + RL+I +TE+D+RQ F PFG + + KD TG SKG +I++ ++A
Sbjct: 220 EPLYQRLYIGSLHFSLTENDVRQIFEPFGPLDFVNLHKDPETGRSKGFGFIQYKNANDAK 279
Query: 78 KAVEEMNG 85
+A+E+MNG
Sbjct: 280 QALEKMNG 287
>gi|195395310|ref|XP_002056279.1| GJ10859 [Drosophila virilis]
gi|194142988|gb|EDW59391.1| GJ10859 [Drosophila virilis]
Length = 388
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
D E +R F +GNI ++ +KDR TG S+G+A++RF S A A+ MNG L
Sbjct: 125 DYNEQKVRATFGRYGNILDLNVLKDRFTGLSRGIAFVRFDLKSSADMAISVMNGYTLEGG 184
Query: 92 SKPIKVLIAAKLEFKEG 108
S P++V +A + + E
Sbjct: 185 SFPLQVRLAKRPKAWEA 201
>gi|297301957|ref|XP_001098541.2| PREDICTED: nucleolysin TIAR isoform 5 [Macaca mulatta]
Length = 506
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 218 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 277
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 278 NKLDAENAIVHMGGQWL 294
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 338 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 391
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 392 NGTTIEGH 399
>gi|149756178|ref|XP_001494868.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Equus
caballus]
Length = 446
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I +KD +TG SKG +I FS + A +A+E++NG L
Sbjct: 276 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFEL--A 333
Query: 92 SKPIKV 97
+P++V
Sbjct: 334 GRPMRV 339
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F + A+
Sbjct: 184 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 227
>gi|71652522|ref|XP_814916.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70879930|gb|EAN93065.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 469
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 22 HSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
H+ LFI + V E++LR FSP+G I +++ +TGE+ G A++R++ +A A+
Sbjct: 23 HANLFIRHLPRVVDENELRIFFSPYGQILSAAVMRNIHTGENLGTAFVRYATNEQARTAL 82
Query: 81 EEMNGEFLPNHSKPIKVLIAAK 102
E NG FL H + I V A K
Sbjct: 83 HECNGRFL--HGRAISVHWAKK 102
>gi|452002611|gb|EMD95069.1| hypothetical protein COCHEDRAFT_1222293 [Cochliobolus
heterostrophus C5]
Length = 333
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 53/84 (63%), Gaps = 5/84 (5%)
Query: 15 EYNDEPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
E+N P H RLFI L G +VT+D L + F+ + ++ + R V+D+ + +SK ++ F+
Sbjct: 186 EWN--PLHPRLFIGNLAG-EVTDDSLLKAFAKYPSLSKARVVRDKKSTKSKSYGFVSFAD 242
Query: 73 TSEAAKAVEEMNGEFLPNHSKPIK 96
T + +A +EMNG+++ +H IK
Sbjct: 243 TDDYFRAAKEMNGKYIGSHPVLIK 266
>gi|451853041|gb|EMD66335.1| hypothetical protein COCSADRAFT_34902 [Cochliobolus sativus ND90Pr]
Length = 333
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 53/84 (63%), Gaps = 5/84 (5%)
Query: 15 EYNDEPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
E+N P H RLFI L G +VT+D L + F+ + ++ + R V+D+ + +SK ++ F+
Sbjct: 186 EWN--PLHPRLFIGNLAG-EVTDDSLLKAFAKYPSLSKARVVRDKKSTKSKSYGFVSFAD 242
Query: 73 TSEAAKAVEEMNGEFLPNHSKPIK 96
T + +A +EMNG+++ +H IK
Sbjct: 243 TDDYFRAAKEMNGKYIGSHPVLIK 266
>gi|443695245|gb|ELT96187.1| hypothetical protein CAPTEDRAFT_148377 [Capitella teleta]
Length = 277
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TE+ LR F PFG I +I+ +K+ TG S+G +I F +A KA+E++NG L
Sbjct: 11 NITEEMLRGIFDPFGKIDDIKLMKNHETGRSQGYGFITFHTAEDAKKALEQLNGFELA-- 68
Query: 92 SKPIKV 97
+P+KV
Sbjct: 69 GRPMKV 74
>gi|326924063|ref|XP_003208252.1| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIAR-like [Meleagris
gallopavo]
Length = 382
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 97 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 156
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 157 NKLDAENAIVHMGGQWL 173
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 217 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 270
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 271 NGTTIEGH 278
>gi|400234898|gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+++D L++ FSP+G I + ++D +G SKG ++ FS EA++A+ EMNG+ + S
Sbjct: 320 ISDDKLKELFSPYGTITSCKVMRDP-SGVSKGSGFVAFSTPEEASRALSEMNGKMV--VS 376
Query: 93 KPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGF-AYPPGIP 142
KP+ V +A + E + ++ Q++ + A A YPPG P
Sbjct: 377 KPLYVALAQRKEERRA-----RLQAQFSQMRPIAMASSVAPRMPMYPPGGP 422
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 35 EDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
E++LR+ F FG I + +KD + G+S+ ++ F +AA+AVE +NG L N
Sbjct: 219 EEELRKIFGEFGTITSVAVMKDED-GKSRCFGFVNFENAEDAARAVEALNGYKLDN 273
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
K + L FS FGNI + D ++G+SKG ++++ A KA+E++NG L
Sbjct: 124 KAIDHKALHDTFSAFGNILSCKVAVD-SSGQSKGYGFVQYDSDEAAQKAIEKLNGMLL 180
>gi|449438385|ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449495630|ref|XP_004159899.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 649
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 19/161 (11%)
Query: 14 REYNDEPPHSRLFILCGKDVTEDD-LRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
+E D+ + L++ D +DD L++ F+ FG I + ++D N G S+G ++ FS
Sbjct: 302 KEAADKYQGANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPN-GISRGSGFVAFSS 360
Query: 73 TSEAAKAVEEMNGEFLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKF 132
EAA+A+ EMNG + SKP+ V +A + KE R ++ Q++ Q A A
Sbjct: 361 PEEAARALAEMNGRMI--VSKPLYVALAQR---KEDRRA--RLQAQFSQMQPMAMASS-- 411
Query: 133 HGFAYPPGIPMVVVPDFSYGLPRNGASALGGNAALSVVDSK 173
P G+PM + G P G G A +++ S+
Sbjct: 412 ---VAPRGMPM-----YPPGGPGIGQQIFYGQAPPTIISSQ 444
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 22/108 (20%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+E+DL+ F FG I + ++D G+SK ++ F +AA++VE +NG+
Sbjct: 219 TSEEDLKNMFGEFGPITSVVVMRD-GEGKSKCFGFVNFENADDAARSVEALNGK------ 271
Query: 93 KPIKVLIAAKLEFKEGYRG-GQK-----ISVQYTSPQSAAYARDKFHG 134
K++ KE Y G QK + ++ QS A DK+ G
Sbjct: 272 ---------KVDGKEWYVGKAQKKSEREVELKSRFEQSVKEAADKYQG 310
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
K + L FS FG+I + D ++G+SKG +++F A KA+E++NG L
Sbjct: 126 KAIDHKALHDTFSAFGSILSCKVATD-SSGQSKGFGFVQFDTEEAALKAIEKLNGMLL 182
>gi|392575524|gb|EIW68657.1| hypothetical protein TREMEDRAFT_71869 [Tremella mesenterica DSM
1558]
Length = 389
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 22 HSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
H +F+ +V +D L + F FG++ E R + D N+G+S+G ++ F K +A +A+
Sbjct: 106 HHHVFVGDLSPEVNDDVLAKAFGAFGSMSEARVMWDMNSGKSRGYGFLSFRKREDAEQAI 165
Query: 81 EEMNGEFLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYAR 129
MNGE+L S+ I+V A + + + G G S YT+P Y +
Sbjct: 166 NTMNGEWL--GSRAIRVNWANQ-KTQTGSSGAYS-SPSYTAPSYGHYPQ 210
>gi|334350324|ref|XP_001371926.2| PREDICTED: ELAV-like protein 2-like [Monodelphis domestica]
Length = 522
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGE 86
+++ + DL Q FSPFG I R + DR +G S+GV +I F K SEA +A++ +NG+
Sbjct: 280 RNMMQKDLEQLFSPFGRIITSRILIDRVSGASRGVGFILFDKKSEAEEAIKALNGQ 335
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
D E+ L Q F PFG + +++ ++D NT + K ++ + +EAA AV +NG L
Sbjct: 449 DSDENVLWQLFGPFGAVSKVKIIRDFNTNKCKRFGFVTMTSYNEAALAVASLNGYCL 505
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+++ F+ G IQ + V+DR+TG+S G ++ + +A +AV +N P
Sbjct: 194 QSMTQEEFYNLFATVGKIQSCKLVRDRSTGQSLGYGFVNYVDPRDAEQAVCLLNRLQCP- 252
Query: 91 HSKPIKVLIA 100
K IKV A
Sbjct: 253 -PKTIKVSFA 261
>gi|255561937|ref|XP_002521977.1| rrm-containing protein, putative [Ricinus communis]
gi|223538781|gb|EEF40381.1| rrm-containing protein, putative [Ricinus communis]
Length = 238
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 19 EPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
E P + + CG +V +D L + FS F + R V+D+ TG++KG ++ F S+
Sbjct: 124 EWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFCNPSD 183
Query: 76 AAKAVEEMNGEFLPNHSKPIKV 97
A A++EMNG+++ N +PIK+
Sbjct: 184 LAAALKEMNGKYVGN--RPIKL 203
>gi|431895395|gb|ELK04911.1| Nucleolysin TIAR [Pteropus alecto]
Length = 428
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 140 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 199
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 200 NKLDAENAIVHMGGQWL 216
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 260 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 313
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 314 NGTAIEGH 321
>gi|395501989|ref|XP_003755369.1| PREDICTED: nucleolysin TIAR [Sarcophilus harrisii]
Length = 392
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 107 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 166
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 167 NKLDAENAIVHMGGQWL 183
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 227 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 280
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 281 NGTTIEGH 288
>gi|327357360|gb|EGE86217.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces dermatitidis ATCC 18188]
Length = 492
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 163 RVNWAYQSNNSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRS 222
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + +A KA+ M+GE+L
Sbjct: 223 RGYGFVAFRERPDAEKALSSMDGEWL 248
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY--IRFSKTSEA 76
P+ R + G D VTED LRQ F G++Q ++ + D+N SKG+ Y + + A
Sbjct: 89 PNKRALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKN---SKGLNYGFVEYDDPGAA 145
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A+ +NG + H I+V A
Sbjct: 146 ERAMATLNGRRV--HQSEIRVNWA 167
>gi|224012523|ref|XP_002294914.1| polyadenlyte binding protein [Thalassiosira pseudonana CCMP1335]
gi|220969353|gb|EED87694.1| polyadenlyte binding protein [Thalassiosira pseudonana CCMP1335]
Length = 612
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
VT+D LR FS G I R +KD TG S+G ++ +S +A +AV EMNG+ +
Sbjct: 306 VTDDVLRDEFSAMGTITSARVMKDLKTGISRGFGFVCYSTPEDATRAVNEMNGKII--LG 363
Query: 93 KPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPGIPM 143
KPI V +A + + + Q + P G AYP +PM
Sbjct: 364 KPIFVALAQRRDVRRAQLEAQHNQGRGNLPGPM--------GGAYPGAVPM 406
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 42 FSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLI 99
FS FGNI + V D+ TG SKG Y+ + AA A+E+++G + + V +
Sbjct: 117 FSLFGNILSCKVVTDKATGLSKGYGYVHYETNEAAASAIEKLDGMLIDGKEVQVGVFM 174
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
+V E L + F+ G + IR +D T S G AY+ + + ++A +A++ MN F
Sbjct: 19 EVNEGFLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNYHQVADAERALDSMN--FTEIK 76
Query: 92 SKPIKVLIAAK 102
KP +++ + +
Sbjct: 77 GKPCRIMWSQR 87
>gi|213514260|ref|NP_001133879.1| Nucleolysin TIAR [Salmo salar]
gi|209155676|gb|ACI34070.1| Nucleolysin TIAR [Salmo salar]
Length = 408
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 103 SSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFVSFY 162
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 163 NKLDAENAIVHMGGQWL 179
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 20/124 (16%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG ++E +RQ FSPFG I EIR + KG ++IRFS AA A+ +
Sbjct: 223 VYCGGIQSGLSEHLMRQTFSPFGQIMEIRVFPE------KGYSFIRFSSHESAAHAIVSV 276
Query: 84 NGEFLPNH--------SKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKF-HG 134
NG + H P ++E+ +G G + S Y SPQ+ Y + +G
Sbjct: 277 NGTSIECHIVKCYWGKESPDIAKSVPQMEYGQGQWG--QWSQMYGSPQAQQYGQQYMANG 334
Query: 135 FAYP 138
+ P
Sbjct: 335 WQVP 338
>gi|297274127|ref|XP_002800732.1| PREDICTED: polyadenylate-binding protein 1 [Macaca mulatta]
Length = 605
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
D+ ++ LR+ FSPFG I + + + G SKG ++ FS EA KAV EMNG +
Sbjct: 272 DIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIV--A 327
Query: 92 SKPIKVLIAAKLEFKEGY 109
+KP+ V +A + E ++ +
Sbjct: 328 TKPLYVALAQRKEERQAH 345
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
G+D+ ++ L+ F FG ++ + D +G+SKG ++ F + +A KAV+EMNG+ L
Sbjct: 167 GEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKEL 224
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DVTE L + FS G I IR +D T S AY+ F +A +A++ MN + +
Sbjct: 21 DVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAERALDTMNFDVI--K 78
Query: 92 SKPIKVLIAAK 102
KP++++ + +
Sbjct: 79 GKPVRIMWSQR 89
>gi|361130939|gb|EHL02669.1| putative Uncharacterized RNA-binding protein C22E12.02 [Glarea
lozoyensis 74030]
Length = 351
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G +VT++ L + FS + +IQ+ R ++D+ T +SKG ++ FS E
Sbjct: 220 DPAHFRLFVGNLAG-EVTDESLYKAFSRWPSIQKARVIRDKRTTKSKGFGFVSFSDGDEF 278
Query: 77 AKAVEEMNGEFLPNH 91
A EM G+++ +H
Sbjct: 279 FSAAREMQGKYIGSH 293
>gi|82802761|gb|ABB92431.1| PABP3 [Aotus trivirgatus]
Length = 629
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+ ++ LR+ FSPFG I + + + G SKG ++ FS EA KAV EMNG + +
Sbjct: 305 IDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIV--AT 360
Query: 93 KPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPGIPMVVVP 147
KP+ V +A + E ++ Y ++ +Y Q A R + A P G M VP
Sbjct: 361 KPLYVALAQRKEERQAY-----LTNEYM--QRMASVRAVPNQRAPPSGYFMTAVP 408
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
G+D+ ++ L+ F FG ++ + D +G+SKG ++ F K +A KAV+EMNG+ L
Sbjct: 199 GEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFEKHEDAQKAVDEMNGKEL 256
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DVTE L + FSP G I IR +D T S AY+ F +A A++ MN + +
Sbjct: 21 DVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAEHALDTMNFDVI--K 78
Query: 92 SKPIKVLIA 100
KP++++ +
Sbjct: 79 GKPVRIMWS 87
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
K + L S FGNI + V D N SKG ++ F A +A+E+MNG L
Sbjct: 108 KSINNKALYDTVSAFGNILSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLL 163
>gi|356576674|ref|XP_003556455.1| PREDICTED: RNA-binding protein 42-like [Glycine max]
Length = 247
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 7/77 (9%)
Query: 24 RLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
RLF CG +V +D L + FS F + R V+D+ TG++KG ++ F+ S+ A A+
Sbjct: 140 RLF--CGDLGNEVNDDVLSKAFSRFPSFNLARVVRDKRTGKTKGYGFVSFANPSDLAAAL 197
Query: 81 EEMNGEFLPNHSKPIKV 97
+EMNG+++ N +PIK+
Sbjct: 198 KEMNGKYVGN--RPIKL 212
>gi|350410161|ref|XP_003488967.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus impatiens]
Length = 508
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I+ + D TG SKG ++ F +A KA+E++NG L
Sbjct: 257 NITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFEL--A 314
Query: 92 SKPIKV 97
+P+KV
Sbjct: 315 GRPMKV 320
>gi|340718900|ref|XP_003397900.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus
terrestris]
Length = 508
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I+ + D TG SKG ++ F +A KA+E++NG L
Sbjct: 257 NITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFEL--A 314
Query: 92 SKPIKV 97
+P+KV
Sbjct: 315 GRPMKV 320
>gi|82802759|gb|ABB92430.1| PABP3 [Chlorocebus sabaeus]
Length = 635
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
D+ ++ LR+ FSPFG I + + + G SKG ++ FS EA KAV EMNG +
Sbjct: 304 DIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIV--A 359
Query: 92 SKPIKVLIAAKLEFKEGY 109
+KP+ V +A + E ++ +
Sbjct: 360 TKPLYVALAQRKEERQAH 377
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
G+D+ ++ L+ F FG ++ + D +G+SKG ++ F + +A KAV+EMNG+ L
Sbjct: 199 GEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKEL 256
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DVTE L + FS G I IR +D T AY+ F +A +A++ MN + +
Sbjct: 21 DVTEAMLYEKFSRAGPILSIRVCRDVITRRYSSYAYVNFQHPKDAERALDTMNFDVI--K 78
Query: 92 SKPIKVLIAAK 102
KP++++ + +
Sbjct: 79 GKPVRIMWSQR 89
>gi|407850123|gb|EKG04635.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 469
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 22 HSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
H+ LFI + V E++LR FSP+G I +++ +TGE+ G A++R++ +A A+
Sbjct: 23 HANLFIRHLPRVVDENELRIFFSPYGQILSAAVMRNIHTGENLGTAFVRYATNEQARTAL 82
Query: 81 EEMNGEFLPNHSKPIKVLIAAK 102
E NG FL H + I V A K
Sbjct: 83 NECNGRFL--HGRAISVHWAKK 102
>gi|378731298|gb|EHY57757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 763
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 21 PHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
P++RLFI D E DLR+ F+PFG + E+ V D KG+AY++F + ++A KA
Sbjct: 244 PNARLFIRNLPFDAKEGDLRKTFAPFGRVSEVHIVTDTRKLTGKGLAYVQFVEPADAEKA 303
Query: 80 VEEMNG 85
+ E++G
Sbjct: 304 LLELDG 309
>gi|346979522|gb|EGY22974.1| RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 383
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 56/90 (62%), Gaps = 6/90 (6%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G +VT++ L + F+ + ++ + R V+D+ T +SKG ++ FS +
Sbjct: 235 DPSHLRLFVGNLAG-EVTDESLLKAFARWPSVAKARVVRDKRTSKSKGFGFVAFSDADDF 293
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAAKLEFK 106
+A +EMNG+++ +H P+ V+ A E K
Sbjct: 294 FQAAKEMNGKYIQSH--PV-VVRKANTEIK 320
>gi|332019312|gb|EGI59819.1| RNA-binding protein 39 [Acromyrmex echinatior]
Length = 528
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I+ + D TG SKG ++ F +A KA+E++NG L
Sbjct: 277 NITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFEL--A 334
Query: 92 SKPIKV 97
+P+KV
Sbjct: 335 GRPMKV 340
>gi|109120204|ref|XP_001091129.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 637
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
D+ ++ LR+ FSPFG I + + + G SKG ++ FS EA KAV EMNG +
Sbjct: 304 DIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIV--A 359
Query: 92 SKPIKVLIAAKLEFKEGY 109
+KP+ V +A + E ++ +
Sbjct: 360 TKPLYVALAQRKEERQAH 377
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
G+D+ ++ L+ F FG ++ + D +G+SKG ++ F + +A KAV+EMNG+ L
Sbjct: 199 GEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKEL 256
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DVTE L + FS G I IR +D T S AY+ F +A +A++ MN + +
Sbjct: 21 DVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAERALDTMNFDVI--K 78
Query: 92 SKPIKVLIAAK 102
KP++++ + +
Sbjct: 79 GKPVRIMWSQR 89
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
K + L S FGNI + V D N SKG ++ F A +A+E+MNG L
Sbjct: 108 KSINNKVLYDTVSAFGNILSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGTLL 163
>gi|116191711|ref|XP_001221668.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
gi|88181486|gb|EAQ88954.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
Length = 413
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 100 RVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRS 159
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + +A KA+ M+GE+L
Sbjct: 160 RGYGFVAFRERPDAEKALSSMDGEWL 185
>gi|383864354|ref|XP_003707644.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Megachile
rotundata]
Length = 507
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I+ + D TG SKG ++ F +A KA+E++NG L
Sbjct: 256 NITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFEL--A 313
Query: 92 SKPIKV 97
+P+KV
Sbjct: 314 GRPMKV 319
>gi|383864352|ref|XP_003707643.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Megachile
rotundata]
Length = 530
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I+ + D TG SKG ++ F +A KA+E++NG L
Sbjct: 279 NITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFEL--A 336
Query: 92 SKPIKV 97
+P+KV
Sbjct: 337 GRPMKV 342
>gi|302757806|ref|XP_002962326.1| hypothetical protein SELMODRAFT_78193 [Selaginella moellendorffii]
gi|300169187|gb|EFJ35789.1| hypothetical protein SELMODRAFT_78193 [Selaginella moellendorffii]
Length = 89
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+TE +++ FS FG ++E+R VKDR TG+SKG +I + ++A A++ M+G+ L +
Sbjct: 6 LTEGIVQEAFSSFGEVREVRIVKDRETGKSKGYGFITYVSEADAQDALQAMDGKNL--NG 63
Query: 93 KPIKVLIAAK 102
+ I+V AA+
Sbjct: 64 REIRVNFAAR 73
>gi|441613453|ref|XP_004088139.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 638
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 25 LFILCGKDVTEDD-LRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
L++ D +D+ LR+ FSPFG I + + + G SKG ++ FS EA KAV EM
Sbjct: 296 LYVKNLDDAIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 84 NGEFLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPGIPM 143
NG + +KP+ V +A + E ++ Y + + + + P + + A P G M
Sbjct: 354 NGRIV--ATKPLYVALAQRKEERQAYLTNEYMQRKASVPAVPNPVINPYQP-APPSGYFM 410
Query: 144 VVVP 147
VP
Sbjct: 411 AAVP 414
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
G+D+ ++ L+ F FG ++ + D+ +G+SKG ++ F K +A KAV+EMNG+ L
Sbjct: 199 GEDMDDERLKDLFGKFGPTLSVKVMTDQ-SGKSKGFGFVSFEKHEDAQKAVDEMNGKEL 256
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DVTE L + FS G I IR +D T S AY+ F +A A++ MN + +
Sbjct: 21 DVTEAMLYEKFSRAGPILSIRVCRDVITPHSSNYAYVNFQHPKDAEHALDTMNFDVI--K 78
Query: 92 SKPIKVLIAAK 102
KP++++ + +
Sbjct: 79 GKPLRIMWSQR 89
>gi|406604132|emb|CCH44355.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 349
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 21 PHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
P+ LF+ +VTE DL++ FS +G ++ +R V+D++T +SKG A+I F S A A
Sbjct: 79 PYKTLFVGRLNYEVTEIDLQKEFSKYGEVERVRVVRDKDTSKSKGYAFILFDHDSSAKAA 138
Query: 80 VEEMNG 85
+E NG
Sbjct: 139 YKEANG 144
>gi|350410158|ref|XP_003488966.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus impatiens]
Length = 532
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I+ + D TG SKG ++ F +A KA+E++NG L
Sbjct: 281 NITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFEL--A 338
Query: 92 SKPIKV 97
+P+KV
Sbjct: 339 GRPMKV 344
>gi|307180960|gb|EFN68748.1| RNA-binding protein 39 [Camponotus floridanus]
Length = 529
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I+ + D TG SKG ++ F +A KA+E++NG L
Sbjct: 278 NITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFEL--A 335
Query: 92 SKPIKV 97
+P+KV
Sbjct: 336 GRPMKV 341
>gi|193648018|ref|XP_001950341.1| PREDICTED: nucleolysin TIAR-like [Acyrthosiphon pisum]
Length = 388
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 18 DEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ ++ L++ F+PFG I R V+D T +SKG A++ F K S+A
Sbjct: 91 DTSNHYHIFVGDLSPEIETHTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKSDA 150
Query: 77 AKAVEEMNGEFL 88
A+ MNG++L
Sbjct: 151 ENAINSMNGQWL 162
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 14/97 (14%)
Query: 5 YRINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGE 61
YR T D YN P + + CG + +TE+ + Q FS FG I EIR +D
Sbjct: 188 YRAVTFDDV--YNQSSP-TNCTVYCGGIVEGLTEELVEQVFSRFGTIVEIRAFRD----- 239
Query: 62 SKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVL 98
KG A+I+FS A A+E ++ + H P+K
Sbjct: 240 -KGYAFIKFSTKEAATTAIEAVHNTEINGH--PVKCF 273
>gi|126273035|ref|XP_001367894.1| PREDICTED: nucleolysin TIAR isoform 2 [Monodelphis domestica]
Length = 371
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 86 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 145
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 146 NKLDAENAIVHMGGQWL 162
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 206 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 259
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 260 NGTTIEGH 267
>gi|354500962|ref|XP_003512565.1| PREDICTED: nucleolysin TIAR [Cricetulus griseus]
Length = 336
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 48 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 107
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 108 NKLDAENAIVHMGGQWL 124
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 168 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 221
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 222 NGTTIEGH 229
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+T+D LR+ FS FG I + ++D+N G SKG ++ FS EA++A+ EMNG+ +
Sbjct: 415 ITDDQLRELFSNFGKITSCKIMRDQN-GVSKGSGFVSFSTREEASQALTEMNGKMI--SG 471
Query: 93 KPIKVLIAAKLE 104
KP+ V A + E
Sbjct: 472 KPLYVAFAQRKE 483
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
+VT+ L + FS G + +R +D N+ S G AY+ +S +AA+A+E +N F P +
Sbjct: 132 NVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAMEALN--FAPLN 189
Query: 92 SKPIKVL 98
+KPI+V+
Sbjct: 190 NKPIRVM 196
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 16 YNDEPPHSR------LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYI 68
Y++ P SR +FI K + L FS FG I + D + G+SKG ++
Sbjct: 197 YSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMD-DIGQSKGFGFV 255
Query: 69 RFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
++ K A A++ +NG + + KP+ V
Sbjct: 256 QYEKEESAQSAMKSLNGMLI--NDKPVYV 282
>gi|224124176|ref|XP_002319264.1| predicted protein [Populus trichocarpa]
gi|118487492|gb|ABK95573.1| unknown [Populus trichocarpa]
gi|222857640|gb|EEE95187.1| predicted protein [Populus trichocarpa]
Length = 149
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 21 PHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
P++ LF+ K T + L++ FS FG + + + V DR +G SKG ++R+ +AA+
Sbjct: 52 PNTNLFVSGLSKRTTTEGLQEAFSKFGEVVQAKVVTDRTSGYSKGFGFVRYGTLEDAAEG 111
Query: 80 VEEMNGEFL 88
++ M+G+FL
Sbjct: 112 IKGMDGQFL 120
>gi|91094515|ref|XP_971941.1| PREDICTED: similar to poly A binding protein [Tribolium castaneum]
gi|270000753|gb|EEZ97200.1| hypothetical protein TcasGA2_TC004389 [Tribolium castaneum]
Length = 565
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DVTE L + FSP G I +R +D T +S G AY+ FS+T EA + ++ MN + L
Sbjct: 22 DVTEALLYEKFSPAGQILSLRVCRDSRTKQSLGYAYVNFSQTIEAERVLDTMNFDLL--K 79
Query: 92 SKPIKVLIAAK 102
KPI+++ + +
Sbjct: 80 GKPIRIMWSQR 90
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 36 DDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPI 95
D LR+ FS FG I + + + G SKG ++ FS EA+KA+ EM+G + SKPI
Sbjct: 310 DRLRKEFSQFGAITSAKVMTE--GGRSKGFGFVCFSTPEEASKAITEMDGRMI--GSKPI 365
Query: 96 KVLIAAKLEFKEGYRGG---QKISVQYTSP 122
V +A + E + Y Q+I Q SP
Sbjct: 366 YVALAQRYEDRRAYLSAQCMQRIRHQTMSP 395
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
K + + FS FGNI + D + G SKG ++ F A KA+E++NG L
Sbjct: 109 KSIDNKAMYDTFSAFGNILSCKVAID-DDGVSKGYGFVHFESIEAANKAIEKVNGMLL 165
>gi|119569772|gb|EAW49387.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Homo sapiens]
Length = 336
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 48 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 107
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 108 NKLDAENAIVHMGGQWL 124
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 168 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 221
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 222 NGTTIEGH 229
>gi|389584459|dbj|GAB67191.1| RNA-binding protein [Plasmodium cynomolgi strain B]
Length = 567
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 22 HSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
++LFI K +TE+ +++ FSP+G+++E+ +KD +TG KG ++++F+ +A A+
Sbjct: 186 QAKLFIGSLPKSITEESVKEMFSPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAI 245
Query: 81 EEMNG-EFLPNHSKPIKVLIA 100
+NG + L ++P++V A
Sbjct: 246 NSLNGKKTLEGCARPVEVRFA 266
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 20 PPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
PP + LFI + + DL Q FSPFG + R +++TG ++G A++ + AA
Sbjct: 423 PPGANLFIFHVPNEWHQTDLIQAFSPFGELLSARIATEKSTGRNRGFAFVSYESIESAAA 482
Query: 79 AVEEMNGEFLPNHSKPIKVLI 99
A+ +MNG N K +KV +
Sbjct: 483 AISQMNGFMALN--KKLKVTV 501
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 20 PPHS-RLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PP S +LFI K + E+ +R F FG ++E+ ++D+ T K A+++ + SEA
Sbjct: 84 PPVSIKLFIGRVPKSMEEEQVRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEAD 143
Query: 78 KAVEEMNGE 86
A+ +N +
Sbjct: 144 NAIRSLNNQ 152
>gi|340718898|ref|XP_003397899.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus
terrestris]
Length = 520
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I+ + D TG SKG ++ F +A KA+E++NG L
Sbjct: 269 NITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFEL--A 326
Query: 92 SKPIKV 97
+P+KV
Sbjct: 327 GRPMKV 332
>gi|296803883|ref|XP_002842794.1| RNP domain-containing protein [Arthroderma otae CBS 113480]
gi|238846144|gb|EEQ35806.1| RNP domain-containing protein [Arthroderma otae CBS 113480]
Length = 421
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 19 EPPHSRLFILCGK---DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
+P H RLF CG +VT++ L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 279 DPAHFRLF--CGNLAGEVTDESLLKAFSKYPSVQKARVIRDKRTEKSKGYGFVSFSDGDD 336
Query: 76 AAKAVEEMNGEFLPNH 91
KA EM G+++ +H
Sbjct: 337 YFKAAREMQGKYIGSH 352
>gi|307195359|gb|EFN77277.1| RNA-binding protein 39 [Harpegnathos saltator]
Length = 370
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I+ + D TG SKG ++ F +A KA+E++NG L
Sbjct: 119 NITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFEL--A 176
Query: 92 SKPIKV 97
+P+KV
Sbjct: 177 GRPMKV 182
>gi|297814257|ref|XP_002875012.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297320849|gb|EFH51271.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 494
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
Query: 20 PPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PPH + G +DV E+DLR G I E+R +KDR++G+SKG A++ F A
Sbjct: 111 PPHGSEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQ 170
Query: 78 KAVEEMNGEFLPNHSKPIK 96
KA+E++ HSK K
Sbjct: 171 KAIEDL-------HSKEFK 182
>gi|126273033|ref|XP_001367857.1| PREDICTED: nucleolysin TIAR isoform 1 [Monodelphis domestica]
Length = 388
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 103 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 162
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 163 NKLDAENAIVHMGGQWL 179
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 223 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 276
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 277 NGTTIEGH 284
>gi|356535208|ref|XP_003536140.1| PREDICTED: RNA-binding protein 42-like [Glycine max]
Length = 248
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 7/77 (9%)
Query: 24 RLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
RLF CG +V +D L + FS F + R V+D+ TG++KG ++ F+ S+ A A+
Sbjct: 141 RLF--CGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFANPSDLAGAL 198
Query: 81 EEMNGEFLPNHSKPIKV 97
+EMNG+++ N +PIK+
Sbjct: 199 KEMNGKYVGN--RPIKL 213
>gi|449282273|gb|EMC89133.1| Nucleolysin TIAR, partial [Columba livia]
Length = 378
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 93 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 152
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 153 NKLDAENAIVHMGGQWL 169
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 213 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 266
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 267 NGTTIEGH 274
>gi|344255843|gb|EGW11947.1| Nucleolysin TIAR [Cricetulus griseus]
Length = 353
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 65 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 124
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 125 NKLDAENAIVHMGGQWL 141
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 185 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 238
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 239 NGTTIEGH 246
>gi|224144577|ref|XP_002325337.1| predicted protein [Populus trichocarpa]
gi|222862212|gb|EEE99718.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 19 EPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
E P + + CG +V +D L + FS F + R V+D+ TG++KG ++ F+ ++
Sbjct: 64 EWPENDYRVFCGDLGNEVNDDVLSKAFSRFPSFNLARVVRDKRTGKTKGYGFVSFANPTD 123
Query: 76 AAKAVEEMNGEFLPNHSKPIKV 97
A A++EMNG+++ N +PIK+
Sbjct: 124 LAAALKEMNGKYVGN--RPIKL 143
>gi|195391714|ref|XP_002054505.1| GJ22770 [Drosophila virilis]
gi|194152591|gb|EDW68025.1| GJ22770 [Drosophila virilis]
Length = 401
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++ L+ F+PFG I + R V+D T +SKG ++ F K SEA A+ MNG++L +
Sbjct: 77 EIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWLGSR 136
Query: 92 S 92
S
Sbjct: 137 S 137
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 2 DRNYRINTHDRSREYNDEPPHSRLFILCGKD-------VTEDDLRQGFSPFGNIQEIRCV 54
D N + T D YN P + + CG + E+ L++ FSP+G IQEIR
Sbjct: 153 DMNIKPLTFDEV--YNQSSP-TNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVF 209
Query: 55 KDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
KD KG A++RFS A A+ +N + + +P+K
Sbjct: 210 KD------KGYAFVRFSTKEAATHAIVAVNNTEI--NQQPVKC 244
>gi|441599875|ref|XP_004087575.1| PREDICTED: nucleolysin TIAR isoform 2 [Nomascus leucogenys]
gi|441599878|ref|XP_003255076.2| PREDICTED: nucleolysin TIAR isoform 1 [Nomascus leucogenys]
gi|119569773|gb|EAW49388.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_d [Homo sapiens]
Length = 353
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 65 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 124
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 125 NKLDAENAIVHMGGQWL 141
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 185 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 238
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 239 NGTTIEGH 246
>gi|342879560|gb|EGU80805.1| hypothetical protein FOXB_08672 [Fusarium oxysporum Fo5176]
Length = 350
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G + T+D L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 208 DPSHLRLFVGNLAG-ETTDDALLKAFSRWPSVQKARVIRDKRTSKSKGYGFVSFSDADDF 266
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A +EMN +++ +H P+ V A
Sbjct: 267 FQAAKEMNNKYIQSH--PVTVRKA 288
>gi|242056941|ref|XP_002457616.1| hypothetical protein SORBIDRAFT_03g010380 [Sorghum bicolor]
gi|241929591|gb|EES02736.1| hypothetical protein SORBIDRAFT_03g010380 [Sorghum bicolor]
Length = 464
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 19 EPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
+P ++F+ G D T D L + F P+G+I+++R V DRNTG+ KG +I F S A
Sbjct: 129 DPAQRKIFVHGLGWDATTDTLSEAFGPYGDIEDLRVVTDRNTGKCKGYGFILFRHRSGAR 188
Query: 78 KAVEE 82
A+ E
Sbjct: 189 AALRE 193
>gi|213401557|ref|XP_002171551.1| gar2 [Schizosaccharomyces japonicus yFS275]
gi|211999598|gb|EEB05258.1| gar2 [Schizosaccharomyces japonicus yFS275]
Length = 449
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 10 HDRSREYNDE--PPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVA 66
R+ + D+ PP +FI + TEDD+R FS G IQ +R D N+G KG
Sbjct: 295 QQRASNFGDKQSPPSDTVFIGNLSFNATEDDVRNAFSSCGEIQSVRLPTDMNSGRPKGFG 354
Query: 67 YIRFSKTSEAAKAVEEMNGEFL 88
Y+ F +AAK EMNG F+
Sbjct: 355 YVTFDSI-DAAKQCVEMNGHFI 375
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 35/55 (63%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGE 86
+V D L Q F G + R DRN+G+S+G AY+ FS +EA KAVEEMNG+
Sbjct: 120 NVDNDWLAQEFQGCGTVVAARVQMDRNSGKSRGFAYVEFSSPAEAQKAVEEMNGK 174
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 8 NTHDRSREYNDEP--PHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKG 64
N R++ + D P + LF+ + TED L F FG++ +R D+ +G+ KG
Sbjct: 192 NPEKRAQVFGDSESQPSTTLFVGNLSWNTTEDGLWTAFGEFGDVTHVRLPTDQESGKPKG 251
Query: 65 VAYIRFSKTSEAAKAVEEMNGEFL 88
Y+ F A KA E M G+ L
Sbjct: 252 FGYVEFGDQEGATKAYEAMKGKDL 275
>gi|325089595|gb|EGC42905.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces capsulatus H88]
Length = 492
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 163 RVNWAYQSNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRS 222
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + +A KA+ M+GE+L
Sbjct: 223 RGYGFVAFRERPDAEKALSSMDGEWL 248
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY--IRFSKTSEA 76
P+ R + G D VTED LRQ F G++Q ++ + D+N SKG+ Y + + A
Sbjct: 89 PNKRALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKN---SKGLNYGFVEYDDPGAA 145
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A+ +NG + H I+V A
Sbjct: 146 ERAMSTLNGRRV--HQSEIRVNWA 167
>gi|328781105|ref|XP_624668.3| PREDICTED: RNA-binding protein 39-like [Apis mellifera]
Length = 506
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I+ + D TG SKG ++ F +A KA+E++NG L
Sbjct: 255 NITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFEL--A 312
Query: 92 SKPIKV 97
+P+KV
Sbjct: 313 GRPMKV 318
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+T+D LR+ FS FG I + ++D+N G SKG ++ FS EA++A+ EMNG+ +
Sbjct: 415 ITDDQLRELFSNFGKITSCKIMRDQN-GVSKGSGFVSFSTREEASQALTEMNGKMI--SG 471
Query: 93 KPIKVLIAAKLE 104
KP+ V A + E
Sbjct: 472 KPLYVAFAQRKE 483
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
+VT+ L + FS G + +R +D N+ S G AY+ +S +AA+A+E +N F P +
Sbjct: 132 NVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAMEALN--FAPLN 189
Query: 92 SKPIKVL 98
+KPI+V+
Sbjct: 190 NKPIRVM 196
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 16 YNDEPPHSR------LFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYI 68
Y++ P SR +FI K + L FS FG I + D + G+SKG ++
Sbjct: 197 YSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMD-DIGQSKGFGFV 255
Query: 69 RFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
++ K A A++ +NG + + KP+ V
Sbjct: 256 QYEKEESAQSAMKSLNGMLI--NDKPVYV 282
>gi|307199187|gb|EFN79874.1| Protein sex-lethal [Harpegnathos saltator]
Length = 217
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
+R +E + L++ +++TE + + FS +GNI + +KD+ TG +GVA++RF
Sbjct: 105 ARPSGEEIKETNLYVTNLPRNITESQIDEIFSKYGNIVQKNILKDKLTGLPRGVAFVRFD 164
Query: 72 KTSEAAKAVEEMNGEFLPNHSKPIKVLIA-----AKLEFKEGYRGG 112
K EA +A+ ++G S+P+ V IA K + G++ G
Sbjct: 165 KREEAQEAIARLHGTIPEGGSEPLSVKIAEEHGKQKAAYYAGWQAG 210
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 17 NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
N+EP + + +++ E +L F G ++ R +KD TG S G ++ ++K +A
Sbjct: 24 NEEPRTNLIINYLPQNMNEKELYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDA 83
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
A A+ +NG L +K +KV A
Sbjct: 84 ATAISTLNG--LQVQNKRLKVSFA 105
>gi|45383446|ref|NP_989687.1| nucleolysin TIAR isoform 1 [Gallus gallus]
gi|28883275|gb|AAO49721.1| TIAR [Gallus gallus]
Length = 388
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 103 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 162
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 163 NKLDAENAIVHMGGQWL 179
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 223 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 276
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 277 NGTTIEGH 284
>gi|328876996|gb|EGG25359.1| hypothetical protein DFA_03608 [Dictyostelium fasciculatum]
Length = 1145
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 22 HSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
H+ L+I VT++DL + FS FG + E R + D NT S+ V ++ FS +A A+
Sbjct: 800 HANLYINRLEPHVTKEDLAEAFSKFGELVETRILMDLNTNTSRCVGFVHFSNRRDALAAL 859
Query: 81 EEMNGEFLPNHSKPIKVLIA 100
MNG + S PI V A
Sbjct: 860 SAMNGANISQQSTPIYVKFA 879
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 13/82 (15%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES-----------KGVAYIRFSKTSEAAKA 79
K T +DL+ F FG I+ + V +R + G +++F + AA A
Sbjct: 713 KHFTNEDLKDLFEEFGEIESYKVVANRKAPSTLLPQQPPPQANMGYGFVKFVHSESAAAA 772
Query: 80 VEEMNGEFLPNHSKPIKVLIAA 101
+E MNG SK IKV A
Sbjct: 773 IESMNGHM--TDSKTIKVSYAT 792
>gi|156101369|ref|XP_001616378.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148805252|gb|EDL46651.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 513
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 22 HSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
++LFI K +TE+ +++ FSP+G+++E+ +KD +TG KG ++++F+ +A A+
Sbjct: 186 QAKLFIGSLPKSITEESVKEMFSPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAI 245
Query: 81 EEMNG-EFLPNHSKPIKVLIA 100
+NG + L ++P++V A
Sbjct: 246 NSLNGKKTLEGCARPVEVRFA 266
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 20 PPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAK 78
PP + LFI + + DL Q FSPFG + R +++TG ++G A++ + AA
Sbjct: 369 PPGANLFIFHVPNEWHQTDLIQAFSPFGELLSARIATEKSTGRNRGFAFVSYESIESAAA 428
Query: 79 AVEEMNGEFLPNHSKPIKVLI 99
A+ +MNG N K +KV +
Sbjct: 429 AISQMNGFMALN--KKLKVTV 447
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 20 PPHS-RLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PP S +LFI K + E+ LR F FG ++E+ ++D+ T K A+++ + SEA
Sbjct: 84 PPVSIKLFIGRVPKTMEEEQLRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEAD 143
Query: 78 KAVEEMNGE 86
A+ +N +
Sbjct: 144 NAIRSLNNQ 152
>gi|449506038|ref|XP_002188262.2| PREDICTED: nucleolysin TIAR [Taeniopygia guttata]
Length = 453
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 168 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 227
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 228 NKLDAENAIVHMGGQWL 244
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 288 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 341
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 342 NGTTIEGH 349
>gi|344306484|ref|XP_003421917.1| PREDICTED: nucleolysin TIAR-like [Loxodonta africana]
Length = 504
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 216 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 275
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 276 NKLDAENAIVHMGGQWL 292
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 336 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 389
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 390 NGTTIEGH 397
>gi|195116106|ref|XP_002002597.1| GI11879 [Drosophila mojavensis]
gi|193913172|gb|EDW12039.1| GI11879 [Drosophila mojavensis]
Length = 724
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGE-----SKGVAYIRFSKTSEAAKAVEEMNG 85
K++T+ DL FSP+G I R + D T E SKGV +IRF + EA +A++E+NG
Sbjct: 219 KNMTQSDLESLFSPYGKIITSRILCDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNG 278
Query: 86 EFLPNHSKPIKVLIA 100
N ++PI V A
Sbjct: 279 TTPKNSTEPITVKFA 293
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 19 EP-PHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
EP P + L + + +++D++R F FG ++ + ++D+ TG+S G ++ + K +A
Sbjct: 119 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDA 178
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
KA+ +NG L N K IKV IA
Sbjct: 179 EKAINALNGLRLQN--KTIKVSIA 200
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ ++D + + KG ++ + EA A++ +NG L N
Sbjct: 385 ETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSLNGYTLGN 443
>gi|115447379|ref|NP_001047469.1| Os02g0622500 [Oryza sativa Japonica Group]
gi|113537000|dbj|BAF09383.1| Os02g0622500, partial [Oryza sativa Japonica Group]
Length = 137
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 48/74 (64%), Gaps = 5/74 (6%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +V +D L + FS + + R ++D+ TG+++G A++ F+ S+ A A++EM
Sbjct: 31 LFCGDLGNEVNDDVLTKAFSKYPSFNMARVIRDKWTGKTRGYAFVSFANASDLAAALKEM 90
Query: 84 NGEFLPNHSKPIKV 97
NG+++ N +PIK+
Sbjct: 91 NGKYVGN--RPIKL 102
>gi|451798952|gb|AGF69179.1| polyadenylate-binding protein 2-like protein, partial [Triticum
aestivum]
Length = 497
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+T+D LR+ FS FG I + ++D+N G SKG ++ FS EA++A+ EMNG+ +
Sbjct: 216 ITDDQLRELFSNFGKITSCKIMRDQN-GVSKGSGFVSFSTREEASQALTEMNGKMI--SG 272
Query: 93 KPIKVLIAAKLE 104
KP+ V A + E
Sbjct: 273 KPLYVAFAQRKE 284
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K + L FS FG I + D + G+SKG ++++ K A A++ +NG +
Sbjct: 20 KTIDNKTLHDTFSAFGAILSCKVAMD-DIGQSKGFGFVQYEKEESAQSAMKSLNGMLI-- 76
Query: 91 HSKPIKV 97
+ KP+ V
Sbjct: 77 NDKPVYV 83
>gi|329009599|gb|AEB71419.1| ELAV-like protein 1 [Bubalus bubalis]
Length = 92
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+++T+ D FS FG I R + D+ TG S+GVA+IR K SEA +A+ NG P
Sbjct: 7 RNMTQKDAEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRLDKRSEAEEAIASFNGHKPPG 66
Query: 91 HSKPIKVLIAA 101
S+PI AA
Sbjct: 67 SSEPIIEKFAA 77
>gi|425768240|gb|EKV06770.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum Pd1]
gi|425770410|gb|EKV08883.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum PHI26]
Length = 482
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S + E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 166 RVNWAYQSNSTSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRS 225
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F +EA KA+ M+GE+L
Sbjct: 226 RGYGFVAFRDRTEADKALNSMDGEWL 251
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRN---TGESKGVAYIRFSKTSE 75
P+ R + G D VTED L+Q F G++ ++ + D+N T + ++ F
Sbjct: 88 PNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNGQFTTKGHNYGFVEFDDPGA 147
Query: 76 AAKAVEEMNGEFLPNHSKPIKVLIA 100
A +A++ +NG + H I+V A
Sbjct: 148 AERAMQTLNGRRI--HQSEIRVNWA 170
>gi|417410268|gb|JAA51610.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 382
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 93 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 152
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 153 NKLDAENAIVHMGGQWL 169
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 213 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 266
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 267 NGTTIEGH 274
>gi|355562824|gb|EHH19418.1| hypothetical protein EGK_20118, partial [Macaca mulatta]
gi|355766617|gb|EHH62534.1| hypothetical protein EGM_20905, partial [Macaca fascicularis]
gi|440900070|gb|ELR51281.1| Nucleolysin TIAR, partial [Bos grunniens mutus]
Length = 381
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 93 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 152
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 153 NKLDAENAIVHMGGQWL 169
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 213 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 266
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 267 NGTTIEGH 274
>gi|432881561|ref|XP_004073841.1| PREDICTED: CUGBP Elav-like family member 3-like [Oryzias latipes]
Length = 374
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Query: 1 MDRNYRINTHDRSREYNDEPPHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNT 59
M+R ++ D D +LF+ + GK T+ D+R+ F PFG+I+E ++ +
Sbjct: 1 MNRPIQVKPADSESRGEDR----KLFVGMLGKQQTDADVRKMFEPFGSIEECTVLRGPD- 55
Query: 60 GESKGVAYIRFSKTSEAAKAVEEMNGE-FLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQ 118
G SKG A+++F +EA A+ ++G LP S + V A E + G R Q+++ Q
Sbjct: 56 GTSKGCAFVKFQSNAEAQAAINALHGSRTLPGASSSLVVKFADS-EKERGLRRMQQVASQ 114
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
++ T+ ++ Q F PFGN+ + DR T +SK ++ F S A A++ MNG
Sbjct: 298 QEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSAQTAIQAMNG 352
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 18 DEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
D H +F+ +V DL+ F+PFG I + R VKD T +SKG ++ F +A
Sbjct: 97 DTSNHHHVFVGDLSSEVDTPDLKAAFAPFGQISDARVVKDLQTNKSKGYGFVSFLNKVDA 156
Query: 77 AKAVEEMNGEFL 88
A++ MNG++L
Sbjct: 157 ENAIQGMNGQWL 168
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
+TE +R+ FS +G+IQE+R D KG A+IRF AA A+ +NG + H
Sbjct: 219 LTEGKMRETFSHYGHIQEVRIFPD------KGYAFIRFMTHESAAHAIVSVNGSQINGH 271
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 7/83 (8%)
Query: 23 SRLFILC---GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
S+LF+ G D E L++ FS +G++ E R + DR+TG S+G +I F + EAA A
Sbjct: 40 SKLFVGGLSYGTD--ESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAASA 97
Query: 80 VEEMNGEFLPNHSKPIKVLIAAK 102
++ M+G+ L H + I+V A +
Sbjct: 98 LQAMDGQDL--HGRRIRVNYATE 118
>gi|317106693|dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas]
Length = 642
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+T+D L++ FS FG I + ++D N G SKG ++ +S EA+KA+ EMNG+ + S
Sbjct: 322 ITDDKLKELFSEFGTITSCKVMRDPN-GVSKGSGFVAYSTAEEASKALTEMNGKMI--VS 378
Query: 93 KPIKVLIAAKLE 104
KP+ V +A + E
Sbjct: 379 KPLYVALAQRKE 390
>gi|225453602|ref|XP_002264834.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Vitis
vinifera]
gi|296088998|emb|CBI38701.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 20 PPHSRLFILCG--KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAA 77
PPH + G ++ E+DLR P G E+R +K+R++GESKG A+I F A
Sbjct: 97 PPHGSEIFIGGLPREALEEDLRDLCEPIGEALEVRLMKNRDSGESKGYAFISFKTKEIAQ 156
Query: 78 KAVEEMNGEFLPNHSKPIK 96
KA+EE+ HSK K
Sbjct: 157 KAIEEL-------HSKEFK 168
>gi|294946457|ref|XP_002785076.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Perkinsus
marinus ATCC 50983]
gi|239898488|gb|EER16872.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Perkinsus
marinus ATCC 50983]
Length = 430
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 24 RLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LF+ DV + +L++ FS +G + E C++ R G ++ A++RFSK S+ +A++
Sbjct: 109 KLFVANVPADVDDAELKRVFSQYGTVTEAYCIQPRRPGGNR-AAFVRFSKKSDGLRAIDA 167
Query: 83 MNGEF-LPNHSKPIKVLIAAKLEFKEGYR 110
+N +F PN+ +P+ V A E ++ +R
Sbjct: 168 LNEKFTFPNNDRPVAVKCAETREQRDAHR 196
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 7 INTHDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGV 65
+ T ++ D P + +F+ + T++DL + F G + R + D T +SKG
Sbjct: 303 MQTPRSQQQRRDGPMGANVFVYNIPPEWTDNDLVREFGSCGPLSTTRVIIDSQTNQSKGY 362
Query: 66 AYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLI 99
++ F + A KAVE M+G FL + + +KV I
Sbjct: 363 GFVSFREVRSAMKAVETMDG-FLTSTGRRLKVQI 395
>gi|395548760|ref|XP_003775245.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 730
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
D+ +++LR+ FS FG I + + N G SKG ++ FS EA AV EMNG +
Sbjct: 403 DIDDENLRKEFSSFGTITSAKVMM--NNGRSKGFGFVCFSAPEEATTAVTEMNGRLVA-- 458
Query: 92 SKPIKVLIAAKLEFKEGYRGGQKI 115
SKP+ V +A + E ++ + Q +
Sbjct: 459 SKPLYVALAQRKEERKAHLANQYV 482
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
G+D+ ED L + F FG ++ ++D + G SKG ++ F K +A A++ MNG+ L
Sbjct: 298 GEDMDEDRLSKIFEKFGPTLSVKVMRD-DCGRSKGFGFVNFQKHEDAQNAIDNMNGKEL 355
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
+VTE L + FSP G I IR +D T S G AY+ F ++A + + +MN +
Sbjct: 120 EVTEAMLYEKFSPAGPILSIRVCRDAVTHRSLGYAYVNFQHLADAERVMTDMNLYII--K 177
Query: 92 SKPIKVLIAAK 102
KP++++ + +
Sbjct: 178 GKPVRLMWSQR 188
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
K + L FS FGNI + + D N SKG ++ F A +A+++MNG L
Sbjct: 207 KSINNKSLYDAFSSFGNILSCKVITDDNG--SKGYGFVHFEHRESAERAIQKMNGILL 262
>gi|255934068|ref|XP_002558315.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582934|emb|CAP81139.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 496
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S + E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 164 RVNWAYQSNSTSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRS 223
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F +EA KA+ M+GE+L
Sbjct: 224 RGYGFVAFRDRAEADKALNSMDGEWL 249
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRN-TGESKGVAYIRFSKTSEAA 77
P+ R + G D VTED L+Q F G++ ++ + D+N T + ++ F A
Sbjct: 88 PNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFTTKGHNYGFVEFDDPGAAE 147
Query: 78 KAVEEMNGEFLPNHSKPIKVLIA 100
+A++ +NG + H I+V A
Sbjct: 148 RAMQTLNGRRI--HQSEIRVNWA 168
>gi|300796220|ref|NP_001179985.1| nucleolysin TIAR [Bos taurus]
gi|296472594|tpg|DAA14709.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Bos taurus]
Length = 380
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 87 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 146
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 147 NKLDAENAIVHMGGQWL 163
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 207 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 260
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 261 NGTTIEGH 268
>gi|73909065|gb|AAH45608.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
Length = 631
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+ ++ LR+ FSPFG I + + + G SKG ++ FS EA KAV EMNG + +
Sbjct: 305 IDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIV--AT 360
Query: 93 KPIKVLIAAKLEFKEGYRGGQKI----SVQYTSPQSA--------AYARDKFHGFAYPP 139
KP+ V +A + E ++ Y + + SV+ Q A A + + H YPP
Sbjct: 361 KPLYVALAQRKEERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVTQTQNHAAYYPP 419
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DVTE L + FSP G I IR +D T S AY+ F T +A A++ MN + +
Sbjct: 21 DVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVI--K 78
Query: 92 SKPIKVLIAAK 102
KP++++ + +
Sbjct: 79 GKPVRIMWSQR 89
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
G+D+ ++ L+ F FG ++ + D +G+SKG ++ F + +A KAV+EMNG+ L
Sbjct: 199 GEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKEL 256
>gi|54303906|gb|AAV33303.1| aging-associated gene 7 protein [Homo sapiens]
Length = 374
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 87 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 146
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 147 NKLDAENAIVHMGGQWL 163
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 207 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 260
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 261 NGTTIEGH 268
>gi|18858877|ref|NP_570984.1| ELAV-like protein 1 [Danio rerio]
gi|6694225|gb|AAF25188.1|AF184245_1 ribonucleoprotein [Danio rerio]
Length = 322
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T+ ++ F+ +G I R + D+ +G S+GVA+IRF K SEA +A++++NG
Sbjct: 113 KTMTQKNVEDMFTQYGRIINSRILVDQASGLSRGVAFIRFDKRSEAEEAIKDLNGSKPSG 172
Query: 91 HSKPIKVLIAA 101
S+PI V AA
Sbjct: 173 ASEPITVKFAA 183
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
G+D E L Q F PFG + ++ ++D NT + KG ++ + EAA A+ +NG
Sbjct: 248 GQDADEGILWQMFGPFGAVTNVKVIRDFNTSKCKGFGFVTMTNYEEAAMAISSLNG 303
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 18 DEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTS 74
DEP ++ ++ +++++++LR FS G ++ + ++D+ G S G ++ + S
Sbjct: 11 DEPSDAKTNLIINYLPQNMSQEELRSLFSSIGEVESAKLIRDKMAGHSLGYGFVNYVNPS 70
Query: 75 EAAKAVEEMNGEFLPNHSKPIKVLIA 100
+A +A+ +NG L SK IKV A
Sbjct: 71 DAERAINTLNGLRL--QSKTIKVSYA 94
>gi|417410125|gb|JAA51540.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 367
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 78 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 137
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 138 NKLDAENAIVHMGGQWL 154
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 198 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 251
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 252 NGTTIEGH 259
>gi|154269845|ref|XP_001535826.1| hypothetical protein HCAG_09244 [Ajellomyces capsulatus NAm1]
gi|150409464|gb|EDN04912.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 387
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 163 RVNWAYQSNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRS 222
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + +A KA+ M+GE+L
Sbjct: 223 RGYGFVAFRERPDAEKALSSMDGEWL 248
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY--IRFSKTSEA 76
P+ R + G D VTED LRQ F G++Q ++ + D+N SKG+ Y + + A
Sbjct: 89 PNKRALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKN---SKGLNYGFVEYDDPGAA 145
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A+ +NG + H I+V A
Sbjct: 146 ERAMSTLNGRRV--HQSEIRVNWA 167
>gi|89272470|emb|CAJ83096.1| OTTXETP00000006403 [Xenopus (Silurana) tropicalis]
Length = 389
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 103 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 162
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 163 NKLDAENAIVHMGGQWL 179
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLP 89
G +TE +RQ F FG I EIR + KG ++IRFS AA A+ +NG +
Sbjct: 229 GSGLTEQLMRQTFGVFGQILEIRVFPE------KGYSFIRFSTHDSAAHAIVSVNGTTIE 282
Query: 90 NH 91
H
Sbjct: 283 GH 284
>gi|380012525|ref|XP_003690330.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like [Apis
florea]
Length = 506
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I I+ + D TG SKG ++ F +A KA+E++NG L
Sbjct: 255 NITEDMLRGIFEPFGKIDNIQLIMDPXTGRSKGYGFLTFRNADDAKKALEQLNGFEL--A 312
Query: 92 SKPIKV 97
+P+KV
Sbjct: 313 GRPMKV 318
>gi|6678349|ref|NP_033409.1| nucleolysin TIAR [Mus musculus]
gi|61557246|ref|NP_001013211.1| nucleolysin TIAR [Rattus norvegicus]
gi|2500589|sp|P70318.1|TIAR_MOUSE RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|1592563|gb|AAC52870.1| RNA binding protein TIAR [Mus musculus]
gi|12848609|dbj|BAB28019.1| unnamed protein product [Mus musculus]
gi|60552455|gb|AAH91409.1| Tia1 cytotoxic granule-associated RNA binding protein-like 1
[Rattus norvegicus]
gi|148685702|gb|EDL17649.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Mus musculus]
gi|149067621|gb|EDM17173.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_a [Rattus norvegicus]
Length = 392
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 104 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 163
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 164 NKLDAENAIVHMGGQWL 180
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 224 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 277
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 278 NGTTIEGH 285
>gi|253683353|dbj|BAH84828.1| TIA-1-related RNA binding protein [Spodoptera frugiperda]
Length = 283
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 1 MDRNYRIN--THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDR 57
+D+ ++N T ++ D H +F+ ++ LR F+PFG I R V+D
Sbjct: 72 LDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDP 131
Query: 58 NTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
T +SKG A++ F K ++A A++ MNG++L
Sbjct: 132 QTLKSKGYAFVSFVKKADAEAAIQAMNGQWL 162
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 16 YNDEPPHSRLFILCG----KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
YN P + + CG +TED ++ FS FG IQ++R +D KG A+IRF+
Sbjct: 199 YNQSSP-TNTTVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVFRD------KGYAFIRFT 251
Query: 72 KTSEAAKAVEEMNGEFLPNH 91
AA A+E + + H
Sbjct: 252 TKEAAAHAIEATHNTEISGH 271
>gi|198473023|ref|XP_002133161.1| GA28809 [Drosophila pseudoobscura pseudoobscura]
gi|198139264|gb|EDY70563.1| GA28809 [Drosophila pseudoobscura pseudoobscura]
Length = 692
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGE-----SKGVAYIRFSKTSEAAKAVEEMNG 85
K++T+ DL FSP+G I R + D T E SKGV +IRF + EA +A++E+NG
Sbjct: 214 KNMTQSDLESLFSPYGKIITSRILCDNITDEHAPGLSKGVGFIRFDQRFEADRAIKELNG 273
Query: 86 EFLPNHSKPIKVLIA 100
N ++PI V A
Sbjct: 274 TTPKNSTEPITVKFA 288
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 19 EP-PHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
EP P + L + + +++D++R F FG ++ + ++D+ TG+S G ++ + K +A
Sbjct: 114 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDA 173
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
KA+ +NG L N K IKV IA
Sbjct: 174 EKAINALNGLRLQN--KTIKVSIA 195
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ ++D + + KG ++ + EA A++ +NG L N
Sbjct: 380 ETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSLNGYTLGN 438
>gi|77695912|ref|NP_001029097.1| nucleolysin TIAR isoform 2 [Homo sapiens]
gi|73998714|ref|XP_852319.1| PREDICTED: nucleolysin TIAR isoform 2 [Canis lupus familiaris]
gi|114633030|ref|XP_001154768.1| PREDICTED: nucleolysin TIAR isoform 6 [Pan troglodytes]
gi|311271911|ref|XP_003133244.1| PREDICTED: nucleolysin TIAR isoform 2 [Sus scrofa]
gi|338716472|ref|XP_003363459.1| PREDICTED: nucleolysin TIAR [Equus caballus]
gi|390473251|ref|XP_003734574.1| PREDICTED: nucleolysin TIAR isoform 2 [Callithrix jacchus]
gi|395827973|ref|XP_003787162.1| PREDICTED: nucleolysin TIAR isoform 1 [Otolemur garnettii]
gi|397510639|ref|XP_003825700.1| PREDICTED: nucleolysin TIAR isoform 2 [Pan paniscus]
gi|402881652|ref|XP_003904380.1| PREDICTED: nucleolysin TIAR isoform 2 [Papio anubis]
gi|426253186|ref|XP_004020281.1| PREDICTED: nucleolysin TIAR isoform 2 [Ovis aries]
gi|426366374|ref|XP_004050233.1| PREDICTED: nucleolysin TIAR isoform 2 [Gorilla gorilla gorilla]
gi|158255404|dbj|BAF83673.1| unnamed protein product [Homo sapiens]
gi|380783709|gb|AFE63730.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|383408327|gb|AFH27377.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|384942768|gb|AFI34989.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|410218476|gb|JAA06457.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257384|gb|JAA16659.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296998|gb|JAA27099.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 392
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 104 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 163
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 164 NKLDAENAIVHMGGQWL 180
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 224 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 277
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 278 NGTTIEGH 285
>gi|361127946|gb|EHK99901.1| putative Nucleolysin TIA-1 [Glarea lozoyensis 74030]
Length = 505
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S N E + I G +V ++ L Q FS FG++ E R + D TG S
Sbjct: 164 RVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRS 223
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F + +A KA+ M+GE+L
Sbjct: 224 RGYGFVAFRERQDAEKALSSMDGEWL 249
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTG---ESKGVAY--IRFSKT 73
P+ R + G D VTED LRQ F G++Q ++ + D+N G ++KG Y + +
Sbjct: 84 PNKRALYVGGLDPRVTEDVLRQIFETTGHVQHVKIIPDKNVGAEQQAKGFNYGFVEYDDP 143
Query: 74 SEAAKAVEEMNGEFLPNHSKPIKVLIA 100
A +A++ +NG + H I+V A
Sbjct: 144 GAAERAMQTLNGRRV--HQAEIRVNWA 168
>gi|17508585|ref|NP_493022.1| Protein R09B3.2 [Caenorhabditis elegans]
gi|3879015|emb|CAB03236.1| Protein R09B3.2 [Caenorhabditis elegans]
Length = 83
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 34 TEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG-EFLPNHS 92
TE++L FS G I +R V DR TG +G A+I F++ A +AVE+MNG EF +
Sbjct: 17 TEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQMNGAEF---NG 73
Query: 93 KPIKVLIAAK 102
+P++V +A K
Sbjct: 74 RPLRVNLANK 83
>gi|14714709|gb|AAH10496.1| Tial1 protein [Mus musculus]
gi|148685700|gb|EDL17647.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Mus musculus]
gi|149067624|gb|EDM17176.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_d [Rattus norvegicus]
Length = 375
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 87 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 146
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 147 NKLDAENAIVHMGGQWL 163
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 207 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 260
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 261 NGTTIEGH 268
>gi|4507499|ref|NP_003243.1| nucleolysin TIAR isoform 1 [Homo sapiens]
gi|194205608|ref|XP_001492932.2| PREDICTED: nucleolysin TIAR isoform 2 [Equus caballus]
gi|311271909|ref|XP_001928970.2| PREDICTED: nucleolysin TIAR isoform 1 [Sus scrofa]
gi|332835148|ref|XP_001154534.2| PREDICTED: nucleolysin TIAR isoform 2 [Pan troglodytes]
gi|345792875|ref|XP_865423.2| PREDICTED: nucleolysin TIAR isoform 18 [Canis lupus familiaris]
gi|390473245|ref|XP_002756491.2| PREDICTED: nucleolysin TIAR isoform 1 [Callithrix jacchus]
gi|395827975|ref|XP_003787163.1| PREDICTED: nucleolysin TIAR isoform 2 [Otolemur garnettii]
gi|397510637|ref|XP_003825699.1| PREDICTED: nucleolysin TIAR isoform 1 [Pan paniscus]
gi|402881650|ref|XP_003904379.1| PREDICTED: nucleolysin TIAR isoform 1 [Papio anubis]
gi|403259379|ref|XP_003922194.1| PREDICTED: nucleolysin TIAR [Saimiri boliviensis boliviensis]
gi|426253184|ref|XP_004020280.1| PREDICTED: nucleolysin TIAR isoform 1 [Ovis aries]
gi|426366372|ref|XP_004050232.1| PREDICTED: nucleolysin TIAR isoform 1 [Gorilla gorilla gorilla]
gi|267131|sp|Q01085.1|TIAR_HUMAN RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|189310|gb|AAA36384.1| nucleolysin TIAR [Homo sapiens]
gi|158254826|dbj|BAF83384.1| unnamed protein product [Homo sapiens]
gi|261858270|dbj|BAI45657.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[synthetic construct]
gi|380783711|gb|AFE63731.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|383408329|gb|AFH27378.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|384942770|gb|AFI34990.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|410218474|gb|JAA06456.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257382|gb|JAA16658.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296996|gb|JAA27098.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 375
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 87 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 146
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 147 NKLDAENAIVHMGGQWL 163
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 207 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 260
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 261 NGTTIEGH 268
>gi|402901594|ref|XP_003913731.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 636
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
D+ ++ LR+ FSPFG I + + + G SKG ++ FS EA KAV EMNG +
Sbjct: 304 DIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIV--A 359
Query: 92 SKPIKVLIAAKLEFKEGY 109
+KP+ V +A + E ++ +
Sbjct: 360 TKPLYVALAQRKEDRQAH 377
Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
G+D+ ++ L+ F FG ++ + D +G+SKG ++ F + +A KAV+EMNG+ L
Sbjct: 199 GEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKEL 256
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DVTE L + FS G I IR +D T S AY+ F +A A++ MN + +
Sbjct: 21 DVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAEHALDTMNFDVI--K 78
Query: 92 SKPIKVLIAAK 102
KP++++ + +
Sbjct: 79 GKPVRIMWSQR 89
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
K + L S FGNI + V D N SKG ++ F A +A+E+MNG L
Sbjct: 108 KSINNKVLYDTVSAFGNILSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGTLL 163
>gi|388512901|gb|AFK44512.1| unknown [Medicago truncatula]
Length = 144
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 21 PHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
P + LF+ K T + LR+ F FG + R V DR +G SKG +++++ +AAK
Sbjct: 49 PSTNLFVSGLSKRTTTETLREAFQKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKG 108
Query: 80 VEEMNGEFL 88
+E M+G+FL
Sbjct: 109 IEGMDGKFL 117
>gi|195384832|ref|XP_002051116.1| GJ13991 [Drosophila virilis]
gi|194147573|gb|EDW63271.1| GJ13991 [Drosophila virilis]
Length = 725
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNT-----GESKGVAYIRFSKTSEAAKAVEEMNG 85
K++T+ DL FSP+G I R + D T G SKGV +IRF + EA +A++E+NG
Sbjct: 197 KNMTQSDLESLFSPYGKIITSRILCDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNG 256
Query: 86 EFLPNHSKPIKVLIA 100
N ++PI V A
Sbjct: 257 TTPKNSTEPITVKFA 271
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +++D++R F FG ++ + ++D+ TG+S G ++ + K +A KA+ +NG L N
Sbjct: 111 QTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINALNGLRLQN 170
Query: 91 HSKPIKVLIA 100
K IKV IA
Sbjct: 171 --KTIKVSIA 178
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ ++D + + KG ++ + EA A++ +NG L N
Sbjct: 363 ETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSLNGYTLGN 421
>gi|150003039|ref|YP_001297783.1| RNA-binding protein rbpA [Bacteroides vulgatus ATCC 8482]
gi|212690527|ref|ZP_03298655.1| hypothetical protein BACDOR_00009 [Bacteroides dorei DSM 17855]
gi|237708016|ref|ZP_04538497.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265754197|ref|ZP_06089386.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|294775663|ref|ZP_06741171.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|319642186|ref|ZP_07996846.1| RNA-binding protein [Bacteroides sp. 3_1_40A]
gi|345515924|ref|ZP_08795421.1| hypothetical protein BSEG_02772 [Bacteroides dorei 5_1_36/D4]
gi|345518203|ref|ZP_08797658.1| hypothetical protein BSFG_02926 [Bacteroides sp. 4_3_47FAA]
gi|423229914|ref|ZP_17216319.1| hypothetical protein HMPREF1063_02139 [Bacteroides dorei
CL02T00C15]
gi|423241567|ref|ZP_17222679.1| hypothetical protein HMPREF1065_03302 [Bacteroides dorei
CL03T12C01]
gi|423247004|ref|ZP_17228055.1| hypothetical protein HMPREF1064_04261 [Bacteroides dorei
CL02T12C06]
gi|423314856|ref|ZP_17292788.1| hypothetical protein HMPREF1058_03400 [Bacteroides vulgatus
CL09T03C04]
gi|149931463|gb|ABR38161.1| putative RNA-binding protein rbpA [Bacteroides vulgatus ATCC
8482]
gi|212666876|gb|EEB27448.1| hypothetical protein BACDOR_00009 [Bacteroides dorei DSM 17855]
gi|229436554|gb|EEO46631.1| hypothetical protein BSEG_02772 [Bacteroides dorei 5_1_36/D4]
gi|229458002|gb|EEO63723.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|254836470|gb|EET16779.1| hypothetical protein BSFG_02926 [Bacteroides sp. 4_3_47FAA]
gi|263234906|gb|EEZ20461.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|294450507|gb|EFG18999.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|317386172|gb|EFV67091.1| RNA-binding protein [Bacteroides sp. 3_1_40A]
gi|392632705|gb|EIY26663.1| hypothetical protein HMPREF1063_02139 [Bacteroides dorei
CL02T00C15]
gi|392633765|gb|EIY27703.1| hypothetical protein HMPREF1064_04261 [Bacteroides dorei
CL02T12C06]
gi|392641153|gb|EIY34938.1| hypothetical protein HMPREF1065_03302 [Bacteroides dorei
CL03T12C01]
gi|392681038|gb|EIY74400.1| hypothetical protein HMPREF1058_03400 [Bacteroides vulgatus
CL09T03C04]
Length = 81
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG-EFL 88
V E DL Q + +G + ++ +KDR TG+SKG A++ +EAA+A+ E+NG EF+
Sbjct: 12 VKEGDLEQAMAAYGVVTSVKVIKDRETGKSKGFAFVEMENDAEAAQAMNELNGSEFM 68
>gi|442761059|gb|JAA72688.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Ixodes ricinus]
Length = 235
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED L+ F PFG I +I +KD T SKG +I F + +A KA+E++NG L
Sbjct: 155 NITEDMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNGFELA-- 212
Query: 92 SKPIKV 97
+P+KV
Sbjct: 213 GRPMKV 218
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
DL + FS G ++++R + D T SKG+AY+ F A+ +NG+ L
Sbjct: 58 DLEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEFQDVESVPLAM-GLNGQKL 108
>gi|359477208|ref|XP_002279515.2| PREDICTED: flowering time control protein FCA [Vitis vinifera]
Length = 785
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 23 SRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
++LF+ + TE+D+R F GN+ E+ +KD+ TG+ +G +I+++ + EA +A+
Sbjct: 118 AKLFVGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIR 177
Query: 82 EMNGEF-LPNHSKPIKVLIA 100
++ ++ LP PI+V A
Sbjct: 178 ALHNQYTLPGGVGPIQVRYA 197
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 24 RLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LF+ K TE ++++ FSP+G ++++ ++D +S+G +++FS A A+
Sbjct: 210 KLFVGSLNKQATEKEVKEIFSPYGQVEDVYLMRDE-LKQSRGCGFVKFSHRDMAMAAINA 268
Query: 83 MNGEF 87
+NG +
Sbjct: 269 LNGIY 273
>gi|340521037|gb|EGR51272.1| predicted protein [Trichoderma reesei QM6a]
Length = 210
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 56/90 (62%), Gaps = 6/90 (6%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H RLF+ L G + T++ L + FS + ++Q+ R ++D+ T +SKG ++ FS +
Sbjct: 65 DPSHLRLFVGNLAG-ETTDESLLKAFSRWKSVQKARVIRDKRTTKSKGYGFVSFSDADDF 123
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIAAKLEFK 106
+A +EM+G+++ +H P+ V+ A E K
Sbjct: 124 FQAAKEMHGKYIQSH--PV-VVKKANTEIK 150
>gi|308464232|ref|XP_003094384.1| CRE-EXC-7 protein [Caenorhabditis remanei]
gi|308247806|gb|EFO91758.1| CRE-EXC-7 protein [Caenorhabditis remanei]
Length = 457
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
+R ND+ S L++ K +T +L F PFG I R + D TG SKGV ++RF
Sbjct: 120 ARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFD 179
Query: 72 KTSEAAKAVEEMNGEFLPNHSKPIKVLIA 100
K EA A++ +NG S+ I V A
Sbjct: 180 KKDEADNAIKTLNGSIPTGCSEQITVKFA 208
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T++++R F+ G I+ + V+D+ TG+S G ++ + + ++A +AV NG L N
Sbjct: 53 QGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVQEADALRAVSSFNGLRLQN 112
Query: 91 HSKPIKV 97
K IKV
Sbjct: 113 --KTIKV 117
>gi|198425950|ref|XP_002126161.1| PREDICTED: similar to ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 (Hu antigen D) [Ciona intestinalis]
Length = 564
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K +T++DL++ F PFG I R + + +TG S+GV ++RF K EA A+ +NG
Sbjct: 183 KSMTQEDLQRIFHPFGRIITSRILVEPSTGMSRGVGFVRFDKRPEAENAISALNGTIPAG 242
Query: 91 HSKPIKVLIA 100
P+ V A
Sbjct: 243 AKDPVTVKFA 252
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T++DLR FS G ++ + ++D+ TG+S G ++ + K ++A KA+ +NG L
Sbjct: 97 QAMTQEDLRNLFSSIGELESCKLIRDKLTGQSLGYGFVNYVKAADAEKAINSLNG--LRM 154
Query: 91 HSKPIKVLIA 100
K IKV A
Sbjct: 155 QQKTIKVSFA 164
>gi|119357086|ref|YP_911730.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
gi|119354435|gb|ABL65306.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
Length = 90
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLP--- 89
V+EDDLR FS FG + + D+ +G SKG +I S SEA +A+E MN + L
Sbjct: 12 VSEDDLRDAFSQFGQVDSANIINDKFSGRSKGFGFIEMSNDSEAREAIESMNDQDLKGRT 71
Query: 90 ---NHSKP 94
N +KP
Sbjct: 72 IKVNEAKP 79
>gi|388511713|gb|AFK43918.1| unknown [Lotus japonicus]
Length = 141
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 21 PHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
P + LF+ K T + LR+ F+ FG + R V DR +G SKG +++++ EA+K
Sbjct: 42 PSTNLFVSGLNKRTTTEKLREEFAKFGEVVHARVVTDRVSGYSKGFGFVKYATIEEASKG 101
Query: 80 VEEMNGEFL 88
++ M+G+FL
Sbjct: 102 IQGMDGKFL 110
>gi|357441373|ref|XP_003590964.1| RNA-binding protein [Medicago truncatula]
gi|355480012|gb|AES61215.1| RNA-binding protein [Medicago truncatula]
Length = 240
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 19 EPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSE 75
E P + CG +V +D L + F+ F + R V+D+ TG++KG +I F+ ++
Sbjct: 126 EWPEDDYRLFCGDLGNEVNDDVLSKAFTRFPSFNMARVVRDKRTGKTKGYGFISFANPAD 185
Query: 76 AAKAVEEMNGEFLPNHSKPIKV 97
A A++EMNG+++ N +PIK+
Sbjct: 186 LAAALKEMNGKYVGN--RPIKL 205
>gi|443732260|gb|ELU17052.1| hypothetical protein CAPTEDRAFT_226396 [Capitella teleta]
Length = 276
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
+D E DL++ F PFGNI I KD+ TG+SKG A+I F + +AA+A++ ++G
Sbjct: 202 EDTREADLQELFKPFGNISRIYLAKDKVTGQSKGFAFINFHRREDAARAIQGISG 256
>gi|351710501|gb|EHB13420.1| Nucleolysin TIAR [Heterocephalus glaber]
Length = 392
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 104 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 163
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 164 NKLDAENAIVHMGGQWL 180
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 224 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 277
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 278 NGTTIEGH 285
>gi|148231281|ref|NP_001085808.1| RNA binding motif protein 23 [Xenopus laevis]
gi|49118375|gb|AAH73374.1| MGC80803 protein [Xenopus laevis]
Length = 416
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TE+ LR F PFG I+ I+ +K+ +TG SKG +I F+ A +A+E++NG L
Sbjct: 260 NITEEMLRGIFEPFGKIENIQLLKEPDTGRSKGFGFITFTDAECARRALEQLNGFELA-- 317
Query: 92 SKPIKV 97
KP+KV
Sbjct: 318 GKPMKV 323
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G +++++ + DRN+ SKG+AY+ F + A+
Sbjct: 168 DLEDFFSAVGKVRDVKIISDRNSRRSKGIAYVEFCEIHSVPLAI 211
>gi|19549688|ref|NP_599124.1| RNA-binding protein 9, isoform B [Drosophila melanogaster]
gi|19549694|ref|NP_599127.1| RNA-binding protein 9, isoform C [Drosophila melanogaster]
gi|221330653|ref|NP_476937.3| RNA-binding protein 9, isoform I [Drosophila melanogaster]
gi|158226|gb|AAC13645.1| RNA-binding protein [Drosophila melanogaster]
gi|22945349|gb|AAF51177.2| RNA-binding protein 9, isoform B [Drosophila melanogaster]
gi|22945350|gb|AAF51178.2| RNA-binding protein 9, isoform C [Drosophila melanogaster]
gi|220901922|gb|AAF51179.4| RNA-binding protein 9, isoform I [Drosophila melanogaster]
Length = 444
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGE-----SKGVAYIRFSKTSEAAKAVEEMNG 85
K++T+ DL FSP+G I R + D T E SKGV +IRF + EA +A++E+NG
Sbjct: 205 KNMTQSDLESLFSPYGKIITSRILCDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNG 264
Query: 86 EFLPNHSKPIKVLIA 100
N ++PI V A
Sbjct: 265 TTPKNSTEPITVKFA 279
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 19 EP-PHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
EP P + L + + +++D++R F FG ++ + ++D+ TG+S G ++ + K +A
Sbjct: 105 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDA 164
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
KA+ +NG L N K IKV IA
Sbjct: 165 EKAINALNGLRLQN--KTIKVSIA 186
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
D E+ L Q F PFG +Q ++ ++D + + KG ++ + EA A++ +NG L N
Sbjct: 371 DTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSLNGYTLGN 429
>gi|378731499|gb|EHY57958.1| hypothetical protein HMPREF1120_05978 [Exophiala dermatitidis
NIH/UT8656]
Length = 365
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 19 EPPHSRLFI--LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
+P H R+F+ L G +VT++ L + FS + ++Q+ R ++D+ T +SKG ++ F+ +
Sbjct: 228 DPAHFRIFVGNLAG-EVTDESLLKAFSQYPSVQKARVIRDKRTNKSKGYGFVSFANGDDY 286
Query: 77 AKAVEEMNGEFLPNHSKPIKVLI 99
+A E NG+++ +H IK +
Sbjct: 287 FRAAREQNGKYVGSHPIIIKKAV 309
>gi|357122488|ref|XP_003562947.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
[Brachypodium distachyon]
Length = 138
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFL 88
K T D LR+ FS FG + E R + DR +G S+G +++++ EA + ++ M+G+FL
Sbjct: 49 KRTTTDGLREAFSKFGQVTEARVITDRISGYSRGFGFVKYATVEEAGEGIKGMDGKFL 106
>gi|27924240|gb|AAH45086.1| Tia1 protein, partial [Xenopus laevis]
Length = 427
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 141 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 200
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 201 NKLDAENAIVHMGGQWL 217
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 30 GKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLP 89
G ++E +RQ F FG I EIR + KG ++IRFS AA A+ +NG +
Sbjct: 267 GAGLSEQLMRQTFGVFGQILEIRVFPE------KGYSFIRFSTHDSAAHAIVSVNGTTIE 320
Query: 90 NH 91
H
Sbjct: 321 GH 322
>gi|13357170|gb|AAK20026.1|AF234184_1 sex-lethal protein SXL2 [Lucilia cuprina]
Length = 325
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 45/70 (64%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+D+L + F +GNI + ++D+ TG+ +GVA++RF+K EA +A+ +N
Sbjct: 197 RTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALNNVIPEG 256
Query: 91 HSKPIKVLIA 100
S+P+ V +A
Sbjct: 257 ASQPLTVRLA 266
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+D+T+ +L F G I R +KD TG S G A++ F+ +A A++ +NG + N
Sbjct: 111 QDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSLNGVTVRN 170
Query: 91 HSKPIKVLIA 100
K +KV A
Sbjct: 171 --KRLKVSYA 178
>gi|332029988|gb|EGI69813.1| Sex-lethal-like protein [Acromyrmex echinatior]
Length = 365
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
+R +E + L++ +++TE + + FS +GNI + ++D+ TG +GVA++RF
Sbjct: 171 ARPSGEEIKETNLYVTNLPRNITESQIDELFSKYGNIVQKNILRDKLTGLPRGVAFVRFD 230
Query: 72 KTSEAAKAVEEMNGEFLPNHSKPIKVLIA-----AKLEFKEGYRGG 112
K EA +A+ ++G S+P+ V IA K + G++ G
Sbjct: 231 KREEAQEAIARLHGTIPEGGSEPLSVKIAEEHGKQKAAYYAGWQAG 276
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 17 NDEPPHSRLFILCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
N+EP + + +++ E +L F G ++ R +KD TG S G ++ ++K +A
Sbjct: 90 NEEPRTNLIINYLPQNMNEKELYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDA 149
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
A A+ +NG L +K +KV A
Sbjct: 150 ATAISTLNG--LQVQNKRLKVSFA 171
>gi|224115158|ref|XP_002316957.1| predicted protein [Populus trichocarpa]
gi|222860022|gb|EEE97569.1| predicted protein [Populus trichocarpa]
Length = 153
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 21 PHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKA 79
P++ LF+ K T + L++ FS FG + + R V DR +G SKG +++++ +AA+
Sbjct: 53 PNTNLFVSGLSKRTTSEGLQEAFSKFGEVVQARVVTDRVSGYSKGFGFVKYATLEDAAEG 112
Query: 80 VEEMNGEFL 88
++ M+G+FL
Sbjct: 113 IKGMDGQFL 121
>gi|170044609|ref|XP_001849934.1| polyadenylate-binding protein 1 [Culex quinquefasciatus]
gi|167867688|gb|EDS31071.1| polyadenylate-binding protein 1 [Culex quinquefasciatus]
Length = 628
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+ ++ LR+ FSPFG I + + + G SKG ++ FS EA KAV EMNG + S
Sbjct: 297 IDDERLRKEFSPFGTITSAKVMLEE--GRSKGFGFVCFSAAEEATKAVTEMNGRIV--GS 352
Query: 93 KPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDKFHGFAYPPG------IPMVVV 146
KP+ V +A + E ++ + ++ QY Q A R + G + PG +P +
Sbjct: 353 KPLYVALAQRKEDRKAH-----LASQYM--QRMANMRMQHMGQIFQPGGNGGYYVPTIPQ 405
Query: 147 PDFSYG 152
P +G
Sbjct: 406 PQRFFG 411
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
D+TE L + FS G + IR +D T S G AY+ F + ++A +A++ MN + +
Sbjct: 12 DITEAMLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALDTMNFDLI--K 69
Query: 92 SKPIKVLIAAK 102
+PI+++ + +
Sbjct: 70 GRPIRIMWSQR 80
>gi|358397912|gb|EHK47280.1| hypothetical protein TRIATDRAFT_165657, partial [Trichoderma
atroviride IMI 206040]
Length = 465
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGES 62
R+N +S E + I G +V +D L Q FS FG++ E R + D TG S
Sbjct: 147 RVNWAYQSNTTTKEDTSNHFHIFVGDLSNEVNDDILHQAFSAFGSVSEARVMWDMKTGRS 206
Query: 63 KGVAYIRFSKTSEAAKAVEEMNGEFL 88
+G ++ F +A KA+ M+GE+L
Sbjct: 207 RGYGFVAFRDRPDAEKALSSMDGEWL 232
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 21 PHSRLFILCGKD--VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAY--IRFSKTSEA 76
P+ R + G D VTED LRQ F G++Q ++ + D+N +KG Y + + A
Sbjct: 73 PNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKN---AKGYNYGFVEYDDPGAA 129
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
+A+ +NG + H I+V A
Sbjct: 130 DRAMATLNGRRV--HQSEIRVNWA 151
>gi|195470919|ref|XP_002087754.1| GE18193 [Drosophila yakuba]
gi|194173855|gb|EDW87466.1| GE18193 [Drosophila yakuba]
Length = 446
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGE-----SKGVAYIRFSKTSEAAKAVEEMNG 85
K++T+ DL FSP+G I R + D T E SKGV +IRF + EA +A++E+NG
Sbjct: 207 KNMTQSDLESLFSPYGKIITSRILCDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNG 266
Query: 86 EFLPNHSKPIKVLIA 100
N ++PI V A
Sbjct: 267 TTPKNSTEPITVKFA 281
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 19 EP-PHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
EP P + L + + +++D++R F FG ++ + ++D+ TG+S G ++ + K +A
Sbjct: 107 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDA 166
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
KA+ +NG L N K IKV IA
Sbjct: 167 EKAINALNGLRLQN--KTIKVSIA 188
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ ++D + + KG ++ + EA A++ +NG L N
Sbjct: 373 ETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSLNGYTLGN 431
>gi|301759213|ref|XP_002915456.1| PREDICTED: nucleolysin TIAR-like [Ailuropoda melanoleuca]
Length = 477
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 189 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 248
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 249 NKLDAENAIVHMGGQWL 265
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 309 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 362
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 363 NGTTIEGH 370
>gi|302683360|ref|XP_003031361.1| hypothetical protein SCHCODRAFT_257452 [Schizophyllum commune H4-8]
gi|300105053|gb|EFI96458.1| hypothetical protein SCHCODRAFT_257452 [Schizophyllum commune H4-8]
Length = 624
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DV ++ LR F PFG I R ++D G+SKG ++ +S EA KAV EMN + +
Sbjct: 336 DVDDEKLRAEFEPFGTITSCRVMRDER-GKSKGFGFVCYSAPDEATKAVAEMNNKMI--G 392
Query: 92 SKPIKVLIAAKLEFK 106
SKP+ V +A + E +
Sbjct: 393 SKPLYVSLAQRKEIR 407
>gi|443691962|gb|ELT93683.1| hypothetical protein CAPTEDRAFT_160910 [Capitella teleta]
Length = 291
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG 85
+D E DL++ F PFGNI I KD+ TG+SKG A+I F + +AA+A++ ++G
Sbjct: 217 EDTREADLQELFKPFGNISRIYLAKDKVTGQSKGFAFINFHRREDAARAIQGISG 271
>gi|410129791|dbj|BAM64857.1| RNA binding protein Elav, partial [Lamellibrachia satsuma]
Length = 153
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGE----SKGVAYIRFSKTSEAAKAVEEMNGE 86
K++T+ D+ +P GNI R V D TG SKGV +IRF + EA +A++++NG
Sbjct: 15 KNITQQDIENMCAPCGNIITSRIVSDSQTGTETRISKGVGFIRFDQRHEAERAIKQLNGT 74
Query: 87 FLPNHSKPIKVLIAAKLEFKEGYRGGQKISVQYTSP 122
++PI V A + + Q ++ QY +P
Sbjct: 75 IPEGATEPITVKFANSPSSNKNFLPIQAMA-QYLTP 109
>gi|62122939|ref|NP_001014392.1| RNA binding motif protein 39b [Danio rerio]
gi|61402832|gb|AAH91794.1| RNA binding motif protein 39b [Danio rerio]
Length = 539
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
++TED LR F PFG I+ I+ + D TG SKG +I F+ A KA+E++NG L
Sbjct: 274 NITEDMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFEL--A 331
Query: 92 SKPIKV 97
+P+KV
Sbjct: 332 GRPMKV 337
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 37 DLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAV 80
DL FS G ++++R + DRN+ SKG+AY+ F ++ A+
Sbjct: 182 DLEDFFSAVGKVRDVRMISDRNSRRSKGIAYVEFVDSTSVPLAI 225
>gi|119569771|gb|EAW49386.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_b [Homo sapiens]
Length = 282
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 65 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 124
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 125 NKLDAENAIVHMGGQWL 141
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 185 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 238
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 239 NGTTIEGH 246
>gi|198470946|ref|XP_002133619.1| GA22715 [Drosophila pseudoobscura pseudoobscura]
gi|198145693|gb|EDY72246.1| GA22715 [Drosophila pseudoobscura pseudoobscura]
Length = 672
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 23 SRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
+ L+++ +++ +D L + FSPFG I + ++D+ TG +GVA++RFSK EA A+
Sbjct: 206 TNLYVINLPRNIDDDMLTRTFSPFGQIVQRNILRDKLTGRPRGVAFVRFSKREEAQDALN 265
Query: 82 EMNGEFLPNHSKPIKVLIAAK 102
+N ++PI V +A +
Sbjct: 266 TLNNTVPLGCTQPIWVRLAEE 286
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+D+T+ +L + F+ FG I + ++D TG S G ++ + ++ +A++++NG ++ N
Sbjct: 129 QDMTDRELYELFANFGGINTCKIMRDFKTGYSFGYGFVDYRTEADTEEAIDKLNGLYVRN 188
Query: 91 HSKPIKVLIA 100
K +KV A
Sbjct: 189 --KRLKVSYA 196
>gi|384499302|gb|EIE89793.1| hypothetical protein RO3G_14504 [Rhizopus delemar RA 99-880]
Length = 292
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Query: 1 MDRNYRIN----THDRSREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNI-QEIRCV 54
M R R++ RS + N P ++F+ D ED L+Q F FG I EI
Sbjct: 147 MGRTIRVDDAQPAQGRSTDTNYGPKTDKVFVANLSYDTDEDSLKQAFEKFGTIVGEIGLP 206
Query: 55 KDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKV 97
R+TG +G+AYI+F EA AV+ MNG +L +PI+
Sbjct: 207 ISRDTGRIRGIAYIQFETEDEAEAAVKGMNGVYL--DGRPIRT 247
>gi|194855197|ref|XP_001968493.1| GG24901 [Drosophila erecta]
gi|190660360|gb|EDV57552.1| GG24901 [Drosophila erecta]
Length = 446
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGE-----SKGVAYIRFSKTSEAAKAVEEMNG 85
K++T+ DL FSP+G I R + D T E SKGV +IRF + EA +A++E+NG
Sbjct: 207 KNMTQSDLESLFSPYGKIITSRILCDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNG 266
Query: 86 EFLPNHSKPIKVLIA 100
N ++PI V A
Sbjct: 267 TTPKNSTEPITVKFA 281
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 19 EP-PHSRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEA 76
EP P + L + + +++D++R F FG ++ + ++D+ TG+S G ++ + K +A
Sbjct: 107 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDA 166
Query: 77 AKAVEEMNGEFLPNHSKPIKVLIA 100
KA+ +NG L N K IKV IA
Sbjct: 167 EKAINALNGLRLQN--KTIKVSIA 188
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ E+ L Q F PFG +Q ++ ++D + + KG ++ + EA A++ +NG L N
Sbjct: 373 ETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSLNGYTLGN 431
>gi|2281006|dbj|BAA21559.1| T-cluster binding protein [Homo sapiens]
gi|119569770|gb|EAW49385.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Homo sapiens]
Length = 265
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 48 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 107
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 108 NKLDAENAIVHMGGQWL 124
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 168 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 221
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 222 NGTTIEGH 229
>gi|291404907|ref|XP_002718787.1| PREDICTED: TIA-1 related protein-like [Oryctolagus cuniculus]
Length = 450
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 162 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 221
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 222 NKLDAENAIVHMGGQWL 238
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 282 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 335
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 336 NGTTIEGH 343
>gi|281338083|gb|EFB13667.1| hypothetical protein PANDA_003438 [Ailuropoda melanoleuca]
Length = 340
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 SREYNDEPPHSRLFIL-CGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFS 71
S + D H +F+ ++T +D++ F+PFG I + R VKD TG+SKG ++ F
Sbjct: 93 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 152
Query: 72 KTSEAAKAVEEMNGEFL 88
+A A+ M G++L
Sbjct: 153 NKLDAENAIVHMGGQWL 169
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 ILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEM 83
+ CG +T+ +RQ FSPFG I EIR + KG +++RFS AA A+ +
Sbjct: 213 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 266
Query: 84 NGEFLPNH 91
NG + H
Sbjct: 267 NGTTIEGH 274
>gi|156087761|ref|XP_001611287.1| splicing factor, CC1-like family protein [Babesia bovis]
gi|154798541|gb|EDO07719.1| splicing factor, CC1-like family protein [Babesia bovis]
Length = 488
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 15 EYNDEPPHSRLFILCGK--DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSK 72
E D P ++ L G ++E ++RQ FSPFGNI + ++D ++ G AYI+F +
Sbjct: 239 EVADSPFTIQVTGLTGSLSSISEVEIRQMFSPFGNIISVEILRDPHSNLPLGQAYIKFKR 298
Query: 73 TSEAAKAVEEMNG 85
TSEA +AV MNG
Sbjct: 299 TSEAKEAVTAMNG 311
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 6 RINTHDRSREYNDEPPHSRLFILCGKDVTEDDLRQGFSPF----GNIQEIRCVKDRNTGE 61
RI R + +E L +L D R+ + F G +++++CV+D +G
Sbjct: 124 RIEHEKRRQREIEEAQREDLTVLVINLYLGADERKIYEVFSEHAGKVRDVQCVRDARSGR 183
Query: 62 SKGVAYIRFSKTSEAAKAVEEMNG 85
SKGVAY+ F KA+ MNG
Sbjct: 184 SKGVAYVEFYTQESVIKAL-AMNG 206
>gi|18677184|gb|AAL78224.1|AF345796_1 hypothetical protein Hgg-30 [Heterodera glycines]
Length = 219
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 17/168 (10%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
+ ++ LR F +GNI + + D + G SKG ++ F K EA KAV EMN + + N
Sbjct: 60 INDETLRSNFESYGNITSAKVMCDEH-GRSKGFGFVCFEKADEATKAVVEMNNKIIEN-- 116
Query: 93 KPIKVLIAAKLEFKEGYRGGQKISVQYTSPQSAAYARDK--FHGFAYPPG-----IPMVV 145
KP+ V +A + E ++ +++ QY +A ++ G Y P +P +
Sbjct: 117 KPLYVALAQRKEDRKA-----QLASQYMQRLAAMRMQNPAGLMGTMYAPASGGFFLPQAI 171
Query: 146 VPDFSYGLPRNGASALGGNAA-LSVVDSKGALQ-SLTKALAQATSLLR 191
+ + N S G NA ++ G LQ S KA +S R
Sbjct: 172 QNQRAXAVHANTESVRGTNAWRCPXLEQYGRLQPSQCKAFMMGSSCWR 219
>gi|296083224|emb|CBI22860.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 23 SRLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVE 81
++LF+ + TE+D+R F GN+ E+ +KD+ TG+ +G +I+++ + EA +A+
Sbjct: 41 AKLFVGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIR 100
Query: 82 EMNGEF-LPNHSKPIKVLIA 100
++ ++ LP PI+V A
Sbjct: 101 ALHNQYTLPGGVGPIQVRYA 120
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 24 RLFI-LCGKDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEE 82
+LF+ K TE ++++ FSP+G ++++ ++D +S+G +++FS A A+
Sbjct: 133 KLFVGSLNKQATEKEVKEIFSPYGQVEDVYLMRDE-LKQSRGCGFVKFSHRDMAMAAINA 191
Query: 83 MNG 85
+NG
Sbjct: 192 LNG 194
>gi|429327367|gb|AFZ79127.1| hypothetical protein BEWA_019730 [Babesia equi]
Length = 229
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 18 DEPPHSRLFILCG---KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTS 74
++ P + I CG DVT++ L F + + Q R ++DRN+G++KG ++ +
Sbjct: 62 EDWPKNDFRIFCGHLGNDVTDEILASAFRKYPSFQRARVIRDRNSGKTKGYGFVSLTNPD 121
Query: 75 EAAKAVEEMNGEFLPNHSKPIKVL 98
+ KA+ EMN +F+ N +PI V+
Sbjct: 122 DMLKALNEMNHKFVGN--RPIIVM 143
>gi|608535|gb|AAA96941.1| ribonucleoprotein, partial [Mus musculus]
Length = 174
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%)
Query: 35 EDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKP 94
+ D+ FS FG I R + D+ TG S+GVA+IRF K SEA +A+ G P S+P
Sbjct: 1 QKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFIGHKPPGSSEP 60
Query: 95 IKVLIAAK 102
I V AA
Sbjct: 61 ITVKFAAN 68
>gi|2565362|gb|AAB81985.1| Sex-lethal protein [Musca domestica]
Length = 318
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+ +T+D+L + F +GNI + ++D+ TG +GVA++RF+K EA +A+ +N
Sbjct: 190 RTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVIPEG 249
Query: 91 HSKPIKVLIA 100
S+P+ V +A
Sbjct: 250 ASQPLTVRLA 259
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
+D+T+ +L F G I R +KD TG S G A++ F+ +A A++ +NG + N
Sbjct: 104 QDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTVNGITVRN 163
Query: 91 HSKPIKVLIA 100
K +KV A
Sbjct: 164 --KRLKVSYA 171
>gi|395545876|ref|XP_003774823.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 621
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Query: 1 MDRNYRINTHDRSREYNDEPPHSRLFILCGKDVTEDD-LRQGFSPFGNIQEIRCVKDRNT 59
+ R++ DR Y L++ D +D+ LR FSPFG I + + +
Sbjct: 267 LKRHFEQIKQDRVTRYQG----VNLYVKNLDDTIDDERLRTEFSPFGTITSAKVMME--G 320
Query: 60 GESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSKPIKVLIAAKLEFKEGYRGGQ 113
G S+G ++ FS EAAKAV EMNG+ + SKP+ V +A + E ++ + Q
Sbjct: 321 GHSRGFGFVCFSAPDEAAKAVTEMNGKLV--TSKPLYVALAQRKEERQAHLTNQ 372
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNH 91
DVTE L + FSP G I IR +D T S G AY+ F ++S+A + +E MN + +
Sbjct: 12 DVTEAMLYEKFSPAGPILSIRVCRDMITRSSLGYAYVNFQQSSDAQRVLETMNLDVI--K 69
Query: 92 SKPIKVLIAAK 102
KP++++ + +
Sbjct: 70 GKPVRIMWSQR 80
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 31 KDVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPN 90
K + L FS FGNI + V D N SKG ++ F A KA+E+MNG L
Sbjct: 99 KSIDNRALFDAFSGFGNILSCKVVSDENG--SKGYGFVHFETQESAEKAIEKMNGIVL-- 154
Query: 91 HSKPIKVLI 99
K +KV +
Sbjct: 155 --KSLKVFV 161
>gi|82595543|ref|XP_725893.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23481068|gb|EAA17458.1| putative splicing factor [Plasmodium yoelii yoelii]
Length = 698
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 16/99 (16%)
Query: 32 DVTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNG------ 85
++TE +L+Q F+PFG+I ++ +D TG+SKG +I+F K SEA +A+ MNG
Sbjct: 430 NITEQELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEAIEAMTVMNGMEVAGR 489
Query: 86 EFLPNHSKPIKVLIAAKL----------EFKEGYRGGQK 114
E ++++ K L+A+ + K +GGQK
Sbjct: 490 EIKVSYAQDSKYLLASDALKDLNIPNLNQIKAATQGGQK 528
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 35 EDDLRQGFSPF-GNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHSK 93
E D+ + FS G +++I+C+KD+ +G+SKGVAY+ F KA+ +NG L N +
Sbjct: 331 ERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQDSVIKAL-SVNGYMLKN--R 387
Query: 94 PIKV 97
PIKV
Sbjct: 388 PIKV 391
>gi|260221864|emb|CBA30852.1| Putative RNA-binding protein rbpB [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 124
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 33 VTEDDLRQGFSPFGNIQEIRCVKDRNTGESKGVAYIRFSKTSEAAKAVEEMNGEFLPNHS 92
VT+D L+ FS FG + + + DR+TG SKG A++ S + A A++ +NG+ + S
Sbjct: 40 VTDDSLQSNFSEFGEVTSAKVMMDRDTGRSKGFAFVEMSTPAFAQAAIDGLNGQSVDGRS 99
Query: 93 KPIKVLIAAKLEFK---EGYRGGQ 113
I V +A E + +GYRGG+
Sbjct: 100 --IVVNLARPREDRGGSDGYRGGR 121
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,949,859,557
Number of Sequences: 23463169
Number of extensions: 156095044
Number of successful extensions: 394710
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 11011
Number of HSP's successfully gapped in prelim test: 4319
Number of HSP's that attempted gapping in prelim test: 371002
Number of HSP's gapped (non-prelim): 25843
length of query: 253
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 114
effective length of database: 9,097,814,876
effective search space: 1037150895864
effective search space used: 1037150895864
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)