Psyllid ID: psy8825

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90--
Protein Sequence
MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPKMAVF
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccHHcccccccccccccccccHHHHHHHHHccccEccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccccEEEEc
Coil and Loop (DISEMBL)
mgesqpfrertlshqdkirpgrgsnprpsaYSILLFQIILyqpygksvdwWAYGVLLYEMLvgqppfdgedeEELFAAITdhsvsypkmavf
Flexible Loop (DISEMBL)
mgesqpfrertlshqdkirpgrgsnpRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAItdhsvsypkmavf
Low Complexity Region (SEG)
MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPKMAVF
Disordered region (IsUnstruct)
*****************************AYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPF*******LFAAI*************
Disordered Region (DISOPRED)
*****PF***TLSHQD**RPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPKM*VF
Disordered Region (DISEMBL)
*************HQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPKMAVF
Disordered Region (DISPRO)
*********RT**HQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPKMAVF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPKMAVF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	92	2.2.26 [Sep-21-2011]
P05130	679	Protein kinase C, brain i	yes	N/A	0.565	0.076	0.961	5e-26
Q16974	649	Calcium-dependent protein	N/A	N/A	0.565	0.080	0.865	5e-24
P90980	682	Protein kinase C-like 2 O	yes	N/A	0.565	0.076	0.865	1e-23
P05696	672	Protein kinase C alpha ty	yes	N/A	0.565	0.077	0.826	6e-22
P20444	672	Protein kinase C alpha ty	yes	N/A	0.565	0.077	0.826	6e-22
P17252	672	Protein kinase C alpha ty	yes	N/A	0.565	0.077	0.826	6e-22
P10102	672	Protein kinase C alpha ty	yes	N/A	0.565	0.077	0.826	6e-22
P04409	672	Protein kinase C alpha ty	yes	N/A	0.565	0.077	0.826	8e-22
Q7SY24	670	Protein kinase C beta typ	no	N/A	0.565	0.077	0.807	2e-21
P10829	697	Protein kinase C gamma ty	no	N/A	0.565	0.074	0.788	1e-20

>sp|P05130|KPC1_DROME Protein kinase C, brain isozyme OS=Drosophila melanogaster GN=Pkc53E PE=2 SV=2

 Score =  115 bits (289), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 50/52 (96%), Positives = 52/52 (100%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH+VSYPK
Sbjct: 519 EIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHNVSYPK 570

PKC is activated by diacylglycerol which in turn phosphorylates a range of cellular proteins. PKC also serves as the receptor for phorbol esters, a class of tumor promoters.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1EC: 3

>sp|Q16974|KPC1_APLCA Calcium-dependent protein kinase C OS=Aplysia californica GN=PRKC1 PE=1 SV=2

 Score =  109 bits (273), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 45/52 (86%), Positives = 50/52 (96%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +I+LYQPYG+SVDWWAYGVLLYEML GQPPFDGEDEEELF +ITDH+VSYPK
Sbjct: 489 EIVLYQPYGRSVDWWAYGVLLYEMLAGQPPFDGEDEEELFTSITDHNVSYPK 540

PKC is activated by diacylglycerol which in turn phosphorylates a range of cellular proteins. PKC also serves as the receptor for phorbol esters, a class of tumor promoters.

Aplysia californica (taxid: 6500)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P90980|KPC2_CAEEL Protein kinase C-like 2 OS=Caenorhabditis elegans GN=pkc-2 PE=2 SV=2

 Score =  108 bits (269), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/52 (86%), Positives = 50/52 (96%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +IILYQPYGKSVDWWAYGVLL+EML GQPPFDGEDE+ELF AIT+H+VSYPK
Sbjct: 517 EIILYQPYGKSVDWWAYGVLLFEMLAGQPPFDGEDEDELFTAITEHNVSYPK 568

PKC is activated by diacylglycerol which in turn phosphorylates a range of cellular proteins. PKC also serves as the receptor for phorbol esters, a class of tumor promoters.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P05696|KPCA_RAT Protein kinase C alpha type OS=Rattus norvegicus GN=Prkca PE=1 SV=3

 Score =  102 bits (255), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/52 (82%), Positives = 48/52 (92%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +II YQPYGKSVDWWAYGVLLYEML GQPPFDGEDE+ELF +I +H+VSYPK
Sbjct: 508 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK 559

Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that is involved in positive and negative regulation of cell proliferation, apoptosis, differentiation, migration and adhesion, cardiac hypertrophy, angiogenesis, platelet function and inflammation, by directly phosphorylating targets such as RAF1, BCL2, CSPG4, TNNT2/CTNT, or activating signaling cascade involving MAPK1/3 (ERK1/2) and RAP1GAP. Depending on the cell type, is involved in cell proliferation and cell growth arrest by positive and negative regulation of the cell cycle. Can promote cell growth by phosphorylating and activating RAF1, which mediates the activation of the MAPK/ERK signaling cascade, and/or by up-regulating CDKN1A, which facilitates active cyclin-dependent kinase (CDK) complex formation. In cells stimulated by the phorbol ester PMA, can trigger a cell cycle arrest program which is associated with the accumulation of the hyper-phosphorylated growth-suppressive form of RB1 and induction of the CDK inhibitors CDKN1A and CDKN1B. Depending on the cell type, exhibits anti-apoptotic function and protects cells from apoptosis by suppressing the p53/TP53-mediated activation of IGFBP3, or mediates anti-apoptotic action by phosphorylating BCL2. During macrophage differentiation induced by macrophage colony-stimulating factor (CSF1), is translocated to the nucleus and is associated with macrophage development. After wounding, translocates from focal contacts to lamellipodia and participates in the modulation of desmosomal adhesion. Plays a role in cell motility by phosphorylating CSPG4, which induces association of CSPG4 with extensive lamellipodia at the cell periphery and polarization of the cell accompanied by increases in cell motility. Negatively regulates myocardial contractility and positively regulates angiogenesis, platelet aggregation and thrombus formation in arteries. Mediates hypertrophic growth of neonatal cardiomyocytes, in part through a MAPK1/3 (ERK1/2)-dependent signaling pathway, and upon PMA treatment, is required to induce cardiomyocyte hypertrophy up to heart failure and death, by increasing protein synthesis, protein-DNA ratio and cell surface area. Regulates cardiomyocyte function by phosphorylating cardiac troponin T (TNNT2/CTNT), which induces significant reduction in actomyosin ATPase activity, myofilament calcium sensitivity and myocardial contractility. In angiogenesis, is required for full endothelial cell migration, adhesion to vitronectin (VTN), and vascular endothelial growth factor A (VEGFA)-dependent regulation of kinase activation and vascular tube formation. Involved in the stabilization of VEGFA mRNA at post-transcriptional level and mediates VEGFA-induced cell proliferation. In the regulation of calcium-induced platelet aggregation, mediates signals from the CD36/GP4 receptor for granule release, and activates the integrin heterodimer ITGA2B-ITGB3 through the RAP1GAP pathway for adhesion. During response to lipopolysaccharides (LPS), may regulate selective LPS-induced macrophage functions involved in host defense and inflammation. But in some inflammatory responses, may negatively regulate NF-kappa-B-induced genes, through IL1A-dependent induction of NF-kappa-B inhibitor alpha (NFKBIA/IKBA). Upon stimulation with 12-O-tetradecanoylphorbol-13-acetate (TPA), phosphorylates EIF4G1, which modulates EIF4G1 binding to MKNK1 and may be involved in the regulation of EIF4E phosphorylation. Phosphorylates KIT, leading to inhibition of KIT activity.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P20444|KPCA_MOUSE Protein kinase C alpha type OS=Mus musculus GN=Prkca PE=1 SV=3

 Score =  102 bits (255), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/52 (82%), Positives = 48/52 (92%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +II YQPYGKSVDWWAYGVLLYEML GQPPFDGEDE+ELF +I +H+VSYPK
Sbjct: 508 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK 559

Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that is involved in positive and negative regulation of cell proliferation, apoptosis, differentiation, migration and adhesion, cardiac hypertrophy, angiogenesis, platelet function and inflammation, by directly phosphorylating targets such as RAF1, BCL2, CSPG4, TNNT2/CTNT, or activating signaling cascade involving MAPK1/3 (ERK1/2) and RAP1GAP. Depending on the cell type, is involved in cell proliferation and cell growth arrest by positive and negative regulation of the cell cycle. Can promote cell growth by phosphorylating and activating RAF1, which mediates the activation of the MAPK/ERK signaling cascade, and/or by up-regulating CDKN1A, which facilitates active cyclin-dependent kinase (CDK) complex formation. In cells stimulated by the phorbol ester PMA, can trigger a cell cycle arrest program which is associated with the accumulation of the hyper-phosphorylated growth-suppressive form of RB1 and induction of the CDK inhibitors CDKN1A and CDKN1B. Depending on the cell type, exhibits anti-apoptotic function and protects cells from apoptosis by suppressing the p53/TP53-mediated activation of IGFBP3, or mediates anti-apoptotic action by phosphorylating BCL2. During macrophage differentiation induced by macrophage colony-stimulating factor (CSF1), is translocated to the nucleus and is associated with macrophage development. After wounding, translocates from focal contacts to lamellipodia and participates in the modulation of desmosomal adhesion. Plays a role in cell motility by phosphorylating CSPG4, which induces association of CSPG4 with extensive lamellipodia at the cell periphery and polarization of the cell accompanied by increases in cell motility. Negatively regulates myocardial contractility and positively regulates angiogenesis, platelet aggregation and thrombus formation in arteries. Mediates hypertrophic growth of neonatal cardiomyocytes, in part through a MAPK1/3 (ERK1/2)-dependent signaling pathway, and upon PMA treatment, is required to induce cardiomyocyte hypertrophy up to heart failure and death, by increasing protein synthesis, protein-DNA ratio and cell surface area. Regulates cardiomyocyte function by phosphorylating cardiac troponin T (TNNT2/CTNT), which induces significant reduction in actomyosin ATPase activity, myofilament calcium sensitivity and myocardial contractility. In angiogenesis, is required for full endothelial cell migration, adhesion to vitronectin (VTN), and vascular endothelial growth factor A (VEGFA)-dependent regulation of kinase activation and vascular tube formation. Involved in the stabilization of VEGFA mRNA at post-transcriptional level and mediates VEGFA-induced cell proliferation. In the regulation of calcium-induced platelet aggregation, mediates signals from the CD36/GP4 receptor for granule release, and activates the integrin heterodimer ITGA2B-ITGB3 through the RAP1GAP pathway for adhesion. During response to lipopolysaccharides (LPS), may regulate selective LPS-induced macrophage functions involved in host defense and inflammation. But in some inflammatory responses, may negatively regulate NF-kappa-B-induced genes, through IL1A-dependent induction of NF-kappa-B inhibitor alpha (NFKBIA/IKBA). Upon stimulation with 12-O-tetradecanoylphorbol-13-acetate (TPA), phosphorylates EIF4G1, which modulates EIF4G1 binding to MKNK1 and may be involved in the regulation of EIF4E phosphorylation. Phosphorylates KIT, leading to inhibition of KIT activity.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P17252|KPCA_HUMAN Protein kinase C alpha type OS=Homo sapiens GN=PRKCA PE=1 SV=4

 Score =  102 bits (255), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/52 (82%), Positives = 48/52 (92%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +II YQPYGKSVDWWAYGVLLYEML GQPPFDGEDE+ELF +I +H+VSYPK
Sbjct: 508 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK 559

Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that is involved in positive and negative regulation of cell proliferation, apoptosis, differentiation, migration and adhesion, tumorigenesis, cardiac hypertrophy, angiogenesis, platelet function and inflammation, by directly phosphorylating targets such as RAF1, BCL2, CSPG4, TNNT2/CTNT, or activating signaling cascade involving MAPK1/3 (ERK1/2) and RAP1GAP. Involved in cell proliferation and cell growth arrest by positive and negative regulation of the cell cycle. Can promote cell growth by phosphorylating and activating RAF1, which mediates the activation of the MAPK/ERK signaling cascade, and/or by up-regulating CDKN1A, which facilitates active cyclin-dependent kinase (CDK) complex formation in glioma cells. In intestinal cells stimulated by the phorbol ester PMA, can trigger a cell cycle arrest program which is associated with the accumulation of the hyper-phosphorylated growth-suppressive form of RB1 and induction of the CDK inhibitors CDKN1A and CDKN1B. Exhibits anti-apoptotic function in glioma cells and protects them from apoptosis by suppressing the p53/TP53-mediated activation of IGFBP3, and in leukemia cells mediates anti-apoptotic action by phosphorylating BCL2. During macrophage differentiation induced by macrophage colony-stimulating factor (CSF1), is translocated to the nucleus and is associated with macrophage development. After wounding, translocates from focal contacts to lamellipodia and participates in the modulation of desmosomal adhesion. Plays a role in cell motility by phosphorylating CSPG4, which induces association of CSPG4 with extensive lamellipodia at the cell periphery and polarization of the cell accompanied by increases in cell motility. Is highly expressed in a number of cancer cells where it can act as a tumor promoter and is implicated in malignant phenotypes of several tumors such as gliomas and breast cancers. Negatively regulates myocardial contractility and positively regulates angiogenesis, platelet aggregation and thrombus formation in arteries. Mediates hypertrophic growth of neonatal cardiomyocytes, in part through a MAPK1/3 (ERK1/2)-dependent signaling pathway, and upon PMA treatment, is required to induce cardiomyocyte hypertrophy up to heart failure and death, by increasing protein synthesis, protein-DNA ratio and cell surface area. Regulates cardiomyocyte function by phosphorylating cardiac troponin T (TNNT2/CTNT), which induces significant reduction in actomyosin ATPase activity, myofilament calcium sensitivity and myocardial contractility. In angiogenesis, is required for full endothelial cell migration, adhesion to vitronectin (VTN), and vascular endothelial growth factor A (VEGFA)-dependent regulation of kinase activation and vascular tube formation. Involved in the stabilization of VEGFA mRNA at post-transcriptional level and mediates VEGFA-induced cell proliferation. In the regulation of calcium-induced platelet aggregation, mediates signals from the CD36/GP4 receptor for granule release, and activates the integrin heterodimer ITGA2B-ITGB3 through the RAP1GAP pathway for adhesion. During response to lipopolysaccharides (LPS), may regulate selective LPS-induced macrophage functions involved in host defense and inflammation. But in some inflammatory responses, may negatively regulate NF-kappa-B-induced genes, through IL1A-dependent induction of NF-kappa-B inhibitor alpha (NFKBIA/IKBA). Upon stimulation with 12-O-tetradecanoylphorbol-13-acetate (TPA), phosphorylates EIF4G1, which modulates EIF4G1 binding to MKNK1 and may be involved in the regulation of EIF4E phosphorylation. Phosphorylates KIT, leading to inhibition of KIT activity.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P10102|KPCA_RABIT Protein kinase C alpha type OS=Oryctolagus cuniculus GN=PRKCA PE=2 SV=3

 Score =  102 bits (255), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/52 (82%), Positives = 48/52 (92%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +II YQPYGKSVDWWAYGVLLYEML GQPPFDGEDE+ELF +I +H+VSYPK
Sbjct: 508 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK 559

Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that is involved in positive and negative regulation of cell proliferation, apoptosis, differentiation, migration and adhesion, cardiac hypertrophy, angiogenesis, platelet function and inflammation, by directly phosphorylating targets such as RAF1, BCL2, CSPG4, TNNT2/CTNT, or activating signaling cascade involving MAPK1/3 (ERK1/2) and RAP1GAP. Depending on the cell type, is involved in cell proliferation and cell growth arrest by positive and negative regulation of the cell cycle. Can promote cell growth by phosphorylating and activating RAF1, which mediates the activation of the MAPK/ERK signaling cascade, and/or by up-regulating CDKN1A, which facilitates active cyclin-dependent kinase (CDK) complex formation. In cells stimulated by the phorbol ester PMA, can trigger a cell cycle arrest program which is associated with the accumulation of the hyper-phosphorylated growth-suppressive form of RB1 and induction of the CDK inhibitors CDKN1A and CDKN1B. Depending on the cell type, exhibits anti-apoptotic function and protects cells from apoptosis by suppressing the p53/TP53-mediated activation of IGFBP3, or mediates anti-apoptotic action by phosphorylating BCL2. During macrophage differentiation induced by macrophage colony-stimulating factor (CSF1), is translocated to the nucleus and is associated with macrophage development. After wounding, translocates from focal contacts to lamellipodia and participates in the modulation of desmosomal adhesion. Plays a role in cell motility by phosphorylating CSPG4, which induces association of CSPG4 with extensive lamellipodia at the cell periphery and polarization of the cell accompanied by increases in cell motility. Negatively regulates myocardial contractility and positively regulates angiogenesis, platelet aggregation and thrombus formation in arteries. Mediates hypertrophic growth of neonatal cardiomyocytes, in part through a MAPK1/3 (ERK1/2)-dependent signaling pathway, and upon PMA treatment, is required to induce cardiomyocyte hypertrophy up to heart failure and death, by increasing protein synthesis, protein-DNA ratio and cell surface area. Regulates cardiomyocyte function by phosphorylating cardiac troponin T (TNNT2/CTNT), which induces significant reduction in actomyosin ATPase activity, myofilament calcium sensitivity and myocardial contractility. In angiogenesis, is required for full endothelial cell migration, adhesion to vitronectin (VTN), and vascular endothelial growth factor A (VEGFA)-dependent regulation of kinase activation and vascular tube formation. Involved in the stabilization of VEGFA mRNA at post-transcriptional level and mediates VEGFA-induced cell proliferation. In the regulation of calcium-induced platelet aggregation, mediates signals from the CD36/GP4 receptor for granule release, and activates the integrin heterodimer ITGA2B-ITGB3 through the RAP1GAP pathway for adhesion. During response to lipopolysaccharides (LPS), may regulate selective LPS-induced macrophage functions involved in host defense and inflammation. But in some inflammatory responses, may negatively regulate NF-kappa-B-induced genes, through IL1A-dependent induction of NF-kappa-B inhibitor alpha (NFKBIA/IKBA). Upon stimulation with 12-O-tetradecanoylphorbol-13-acetate (TPA), phosphorylates EIF4G1, which modulates EIF4G1 binding to MKNK1 and may be involved in the regulation of EIF4E phosphorylation. Phosphorylates KIT, leading to inhibition of KIT activity.

Oryctolagus cuniculus (taxid: 9986)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P04409|KPCA_BOVIN Protein kinase C alpha type OS=Bos taurus GN=PRKCA PE=1 SV=3

 Score =  102 bits (254), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 43/52 (82%), Positives = 48/52 (92%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +II YQPYGKSVDWWAYGVLLYEML GQPPFDGEDE+ELF +I +H+VSYPK
Sbjct: 508 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK 559

Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that is involved in positive and negative regulation of cell proliferation, apoptosis, differentiation, migration and adhesion, cardiac hypertrophy, angiogenesis, platelet function and inflammation, by directly phosphorylating targets such as RAF1, BCL2, CSPG4, TNNT2/CTNT, or activating signaling cascade involving MAPK1/3 (ERK1/2) and RAP1GAP. Depending on the cell type, is involved in cell proliferation and cell growth arrest by positive and negative regulation of the cell cycle. Can promote cell growth by phosphorylating and activating RAF1, which mediates the activation of the MAPK/ERK signaling cascade, and/or by up-regulating CDKN1A, which facilitates active cyclin-dependent kinase (CDK) complex formation. In cells stimulated by the phorbol ester PMA, can trigger a cell cycle arrest program which is associated with the accumulation of the hyper-phosphorylated growth-suppressive form of RB1 and induction of the CDK inhibitors CDKN1A and CDKN1B. Depending on the cell type, exhibits anti-apoptotic function and protects cells from apoptosis by suppressing the p53/TP53-mediated activation of IGFBP3, or mediates anti-apoptotic action by phosphorylating BCL2. During macrophage differentiation induced by macrophage colony-stimulating factor (CSF1), is translocated to the nucleus and is associated with macrophage development. After wounding, translocates from focal contacts to lamellipodia and participates in the modulation of desmosomal adhesion. Plays a role in cell motility by phosphorylating CSPG4, which induces association of CSPG4 with extensive lamellipodia at the cell periphery and polarization of the cell accompanied by increases in cell motility. Negatively regulates myocardial contractility and positively regulates angiogenesis, platelet aggregation and thrombus formation in arteries. Mediates hypertrophic growth of neonatal cardiomyocytes, in part through a MAPK1/3 (ERK1/2)-dependent signaling pathway, and upon PMA treatment, is required to induce cardiomyocyte hypertrophy up to heart failure and death, by increasing protein synthesis, protein-DNA ratio and cell surface area. Regulates cardiomyocyte function by phosphorylating cardiac troponin T (TNNT2/CTNT), which induces significant reduction in actomyosin ATPase activity, myofilament calcium sensitivity and myocardial contractility. In angiogenesis, is required for full endothelial cell migration, adhesion to vitronectin (VTN), and vascular endothelial growth factor A (VEGFA)-dependent regulation of kinase activation and vascular tube formation. Involved in the stabilization of VEGFA mRNA at post-transcriptional level and mediates VEGFA-induced cell proliferation. In the regulation of calcium-induced platelet aggregation, mediates signals from the CD36/GP4 receptor for granule release, and activates the integrin heterodimer ITGA2B-ITGB3 through the RAP1GAP pathway for adhesion. During response to lipopolysaccharides (LPS), may regulate selective LPS-induced macrophage functions involved in host defense and inflammation. But in some inflammatory responses, may negatively regulate NF-kappa-B-induced genes, through IL1A-dependent induction of NF-kappa-B inhibitor alpha (NFKBIA/IKBA). Upon stimulation with 12-O-tetradecanoylphorbol-13-acetate (TPA), phosphorylates EIF4G1, which modulates EIF4G1 binding to MKNK1 and may be involved in the regulation of EIF4E phosphorylation. Phosphorylates KIT, leading to inhibition of KIT activity.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q7SY24|KPCB_DANRE Protein kinase C beta type OS=Danio rerio GN=prkcbb PE=2 SV=1

 Score =  100 bits (250), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/52 (80%), Positives = 47/52 (90%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +II YQPYGKSVDWWA+GVLLYEML GQPPFDGEDE+ELF +I +H VSYPK
Sbjct: 508 EIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHHVSYPK 559

Calcium-activated and phospholipid-dependent serine/threonine-protein kinase involved in various processes such as regulation of the B-cell receptor (BCR) signalosome, apoptosis and transcription regulation. Plays a key role in B-cell activation and function by regulating BCR-induced NF-kappa-B activation and B-cell suvival. Required for recruitment and activation of the IKK kinase to lipid rafts and mediates phosphorylation of card11/carma1, leading to activate the NF-kappa-B signaling. Involved in apoptosis following oxidative damage: in case of oxidative conditions, specifically phosphorylates isoform p66Shc of shc1, leading to mitochondrial accumulation of p66Shc, where p66Shc acts as a reactive oxygen species producer. Acts as a coactivator of androgen receptor (andr)-dependent transcription, by being recruited to ANDR target genes and specifically mediating phosphorylation of 'Thr-6' of histone H3 (H3T6ph), a specific tag for epigenetic transcriptional activation.

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P10829|KPCG_RABIT Protein kinase C gamma type OS=Oryctolagus cuniculus GN=PRKCG PE=1 SV=1

 Score = 98.6 bits (244), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/52 (78%), Positives = 47/52 (90%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +II YQPYGKSVDWW++GVLLYEML GQPPFDGEDEEELF AI + +V+YPK
Sbjct: 525 EIIAYQPYGKSVDWWSFGVLLYEMLAGQPPFDGEDEEELFQAIMEQTVTYPK 576

Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that plays diverse roles in neuronal cells and eye tissues, such as regulation of the neuronal receptors GRIA4/GLUR4 and GRIN1/NMDAR1, modulation of receptors and neuronal functions related to sensitivity to opiates, pain and alcohol, mediation of synaptic function and cell survival after ischemia, and inhibition of gap junction activity after oxidative stress. Binds and phosphorylates GRIA4/GLUR4 glutamate receptor and regulates its function by increasing plasma membrane-associated GRIA4 expression. In primary cerebellar neurons treated with the agonist 3,5-dihyidroxyphenylglycine, functions downstream of the metabotropic glutamate receptor GRM5/MGLUR5 and phosphorylates GRIN1/NMDAR1 receptor which plays a key role in synaptic plasticity, synaptogenesis, excitotoxicity, memory acquisition and learning. May be involved in the regulation of hippocampal long-term potentiation (LTP), but may be not necessary for the process of synaptic plasticity. May be involved in desensitization of mu-type opioid receptor-mediated G-protein activation in the spinal cord, and may be critical for the development and/or maintenance of morphine-induced reinforcing effects in the limbic forebrain. May modulate the functionality of mu-type-opioid receptors by participating in a signaling pathway which leads to the phosphorylation and degradation of opioid receptors. May also contributes to chronic morphine-induced changes in nociceptive processing. Plays a role in neuropathic pain mechanisms and contributes to the maintenance of the allodynia pain produced by peripheral inflammation. Plays an important role in initial sensitivity and tolerance to ethanol, by mediating the behavioral effects of ethanol as well as the effects of this drug on the GABA(A) receptors. During and after cerebral ischemia modulate neurotransmission and cell survival in synaptic membranes, and is involved in insulin-induced inhibition of necrosis, an important mechanism for minimizing ischemic injury. Required for the elimination of multiple climbing fibers during innervation of Purkinje cells in developing cerebellum (By similarity). Is activated in lens epithelial cells upon hydrogen peroxide treatment, and phosphorylates connexin-43 (GJA1/CX43), resulting in disassembly of GJA1 gap junction plaques and inhibition of gap junction activity which could provide a protective effect against oxidative stress. Phosphorylates p53/TP53 and promotes p53/TP53-dependent apoptosis in response to DNA damage.

Oryctolagus cuniculus (taxid: 9986)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	92
328709350	668	PREDICTED: protein kinase C, brain isozy	0.565	0.077	0.980	8e-25
195150971	701	GL11571 [Drosophila persimilis] gi|19411	0.565	0.074	0.961	9e-25
195584072	589	GD11233 [Drosophila simulans] gi|1941938	0.565	0.088	0.961	9e-25
198457755	683	GA19732 [Drosophila pseudoobscura pseudo	0.565	0.076	0.961	1e-24
158300340	684	AGAP012252-PA [Anopheles gambiae str. PE	0.565	0.076	0.961	1e-24
8353	639	unnamed protein product [Drosophila mela	0.565	0.081	0.961	1e-24
4938231	639	protein kinase C [Drosophila melanogaste	0.565	0.081	0.961	1e-24
157114762	613	protein kinase c [Aedes aegypti] gi|1088	0.565	0.084	0.961	1e-24
161077180	678	protein C kinase 53E, isoform C [Drosoph	0.565	0.076	0.961	2e-24
270003746	666	hypothetical protein TcasGA2_TC003019 [T	0.565	0.078	0.961	2e-24

>gi|328709350|ref|XP_001945397.2| PREDICTED: protein kinase C, brain isozyme-like [Acyrthosiphon pisum]

 Score =  117 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 51/52 (98%), Positives = 52/52 (100%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK
Sbjct: 508 EIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 559

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195150971|ref|XP_002016423.1| GL11571 [Drosophila persimilis] gi|194110270|gb|EDW32313.1| GL11571 [Drosophila persimilis]

 Score =  117 bits (293), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 50/52 (96%), Positives = 52/52 (100%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH+VSYPK
Sbjct: 541 EIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHNVSYPK 592

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195584072|ref|XP_002081839.1| GD11233 [Drosophila simulans] gi|194193848|gb|EDX07424.1| GD11233 [Drosophila simulans]

 Score =  117 bits (293), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 50/52 (96%), Positives = 52/52 (100%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH+VSYPK
Sbjct: 519 EIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHNVSYPK 570

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198457755|ref|XP_001360786.2| GA19732 [Drosophila pseudoobscura pseudoobscura] gi|198136093|gb|EAL25361.2| GA19732 [Drosophila pseudoobscura pseudoobscura]

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/52 (96%), Positives = 52/52 (100%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH+VSYPK
Sbjct: 523 EIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHNVSYPK 574

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158300340|ref|XP_320290.4| AGAP012252-PA [Anopheles gambiae str. PEST] gi|157013112|gb|EAA00266.4| AGAP012252-PA [Anopheles gambiae str. PEST]

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/52 (96%), Positives = 52/52 (100%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH+VSYPK
Sbjct: 524 EIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHNVSYPK 575

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|8353|emb|CAA28736.1| unnamed protein product [Drosophila melanogaster]

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/52 (96%), Positives = 52/52 (100%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH+VSYPK
Sbjct: 510 EIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHNVSYPK 561

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|4938231|emb|CAA28890.2| protein kinase C [Drosophila melanogaster]

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/52 (96%), Positives = 52/52 (100%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH+VSYPK
Sbjct: 510 EIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHNVSYPK 561

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157114762|ref|XP_001652409.1| protein kinase c [Aedes aegypti] gi|108883562|gb|EAT47787.1| AAEL001108-PA [Aedes aegypti]

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/52 (96%), Positives = 52/52 (100%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH+VSYPK
Sbjct: 453 EIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHNVSYPK 504

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|161077180|ref|NP_001097350.1| protein C kinase 53E, isoform C [Drosophila melanogaster] gi|386768150|ref|NP_001246378.1| protein C kinase 53E, isoform E [Drosophila melanogaster] gi|157400376|gb|ABV53829.1| protein C kinase 53E, isoform C [Drosophila melanogaster] gi|383302538|gb|AFH08131.1| protein C kinase 53E, isoform E [Drosophila melanogaster]

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/52 (96%), Positives = 52/52 (100%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH+VSYPK
Sbjct: 518 EIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHNVSYPK 569

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270003746|gb|EFA00194.1| hypothetical protein TcasGA2_TC003019 [Tribolium castaneum]

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/52 (96%), Positives = 52/52 (100%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH+VSYPK
Sbjct: 506 EIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHNVSYPK 557

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	92
FB|FBgn0003091	679	Pkc53E "Protein C kinase 53E"	0.565	0.076	0.961	1.8e-23
WB|WBGene00004033	725	pkc-2 [Caenorhabditis elegans	0.565	0.071	0.865	2.3e-21
UNIPROTKB|F1MJX9	576	PRKCA "Protein kinase C alpha	0.565	0.090	0.826	2.2e-20
UNIPROTKB|F1LS98	576	Prkca "Protein kinase C alpha	0.565	0.090	0.826	2.2e-20
UNIPROTKB|J9P8Q9	569	PRKCG "Uncharacterized protein	0.565	0.091	0.788	2.4e-20
UNIPROTKB|F1Q1D5	617	PRKCA "Protein kinase C" [Cani	0.565	0.084	0.826	2.5e-20
UNIPROTKB|P04409	672	PRKCA "Protein kinase C alpha	0.565	0.077	0.826	3e-20
UNIPROTKB|P17252	672	PRKCA "Protein kinase C alpha	0.565	0.077	0.826	3e-20
UNIPROTKB|P10102	672	PRKCA "Protein kinase C alpha	0.565	0.077	0.826	3e-20
MGI|MGI:97595	672	Prkca "protein kinase C, alpha	0.565	0.077	0.826	3e-20

FB|FBgn0003091 Pkc53E "Protein C kinase 53E" [Drosophila melanogaster (taxid:7227)]

 Score = 279 (103.3 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 50/52 (96%), Positives = 52/52 (100%)

Query:    37 QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
             +IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH+VSYPK
Sbjct:   519 EIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHNVSYPK 570

GO:0004697 "protein kinase C activity" evidence=IEA;ISS;NAS

GO:0004674 "protein serine/threonine kinase activity" evidence=NAS;IDA

GO:0006468 "protein phosphorylation" evidence=NAS;IDA

GO:0019992 "diacylglycerol binding" evidence=ISS;NAS

GO:0004698 "calcium-dependent protein kinase C activity" evidence=NAS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0035206 "regulation of hemocyte proliferation" evidence=IMP

WB|WBGene00004033 pkc-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 260 (96.6 bits), Expect = 2.3e-21, P = 2.3e-21
 Identities = 45/52 (86%), Positives = 50/52 (96%)

Query:    37 QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
             +IILYQPYGKSVDWWAYGVLL+EML GQPPFDGEDE+ELF AIT+H+VSYPK
Sbjct:   562 EIILYQPYGKSVDWWAYGVLLFEMLAGQPPFDGEDEDELFTAITEHNVSYPK 613

GO:0004697 "protein kinase C activity" evidence=IEA;IDA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0043025 "neuronal cell body" evidence=IDA

GO:0043005 "neuron projection" evidence=IDA

GO:0004698 "calcium-dependent protein kinase C activity" evidence=IDA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IDA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=ISS

UNIPROTKB|F1MJX9 PRKCA "Protein kinase C alpha type" [Bos taurus (taxid:9913)]

 Score = 249 (92.7 bits), Expect = 2.2e-20, P = 2.2e-20
 Identities = 43/52 (82%), Positives = 48/52 (92%)

Query:    37 QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
             +II YQPYGKSVDWWAYGVLLYEML GQPPFDGEDE+ELF +I +H+VSYPK
Sbjct:   412 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK 463

GO:0097193 "intrinsic apoptotic signaling pathway" evidence=IEA

GO:0090330 "regulation of platelet aggregation" evidence=IEA

GO:0071322 "cellular response to carbohydrate stimulus" evidence=IEA

GO:0070555 "response to interleukin-1" evidence=IEA

GO:0050930 "induction of positive chemotaxis" evidence=IEA

GO:0050730 "regulation of peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0050729 "positive regulation of inflammatory response" evidence=IEA

GO:0046627 "negative regulation of insulin receptor signaling pathway" evidence=IEA

GO:0046325 "negative regulation of glucose import" evidence=IEA

GO:0045931 "positive regulation of mitotic cell cycle" evidence=IEA

GO:0045785 "positive regulation of cell adhesion" evidence=IEA

GO:0045766 "positive regulation of angiogenesis" evidence=IEA

GO:0043536 "positive regulation of blood vessel endothelial cell migration" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0035403 "histone kinase activity (H3-T6 specific)" evidence=IEA

GO:0034351 "negative regulation of glial cell apoptotic process" evidence=IEA

GO:0031666 "positive regulation of lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0030593 "neutrophil chemotaxis" evidence=IEA

GO:0030425 "dendrite" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0006937 "regulation of muscle contraction" evidence=IEA

GO:0006874 "cellular calcium ion homeostasis" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004698 "calcium-dependent protein kinase C activity" evidence=IEA

GO:0002159 "desmosome assembly" evidence=IEA

GO:0002062 "chondrocyte differentiation" evidence=IEA

GO:0002026 "regulation of the force of heart contraction" evidence=IEA

GO:0001938 "positive regulation of endothelial cell proliferation" evidence=IEA

GO:0001934 "positive regulation of protein phosphorylation" evidence=IEA

GO:0001750 "photoreceptor outer segment" evidence=IEA

GO:0000188 "inactivation of MAPK activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1LS98 Prkca "Protein kinase C alpha type" [Rattus norvegicus (taxid:10116)]

 Score = 249 (92.7 bits), Expect = 2.2e-20, P = 2.2e-20
 Identities = 43/52 (82%), Positives = 48/52 (92%)

Query:    37 QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
             +II YQPYGKSVDWWAYGVLLYEML GQPPFDGEDE+ELF +I +H+VSYPK
Sbjct:   412 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK 463

GO:0004697 "protein kinase C activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

UNIPROTKB|J9P8Q9 PRKCG "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 237 (88.5 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
 Identities = 41/52 (78%), Positives = 47/52 (90%)

Query:    37 QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
             +II YQPYGKSVDWW++GVLLYEML GQPPFDGEDEEELF AI + +V+YPK
Sbjct:   397 EIIAYQPYGKSVDWWSFGVLLYEMLAGQPPFDGEDEEELFQAIMEQTVTYPK 448

GO:0046872 "metal ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

UNIPROTKB|F1Q1D5 PRKCA "Protein kinase C" [Canis lupus familiaris (taxid:9615)]

 Score = 249 (92.7 bits), Expect = 2.5e-20, P = 2.5e-20
 Identities = 43/52 (82%), Positives = 48/52 (92%)

Query:    37 QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
             +II YQPYGKSVDWWAYGVLLYEML GQPPFDGEDE+ELF +I +H+VSYPK
Sbjct:   453 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK 504

GO:0004697 "protein kinase C activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|P04409 PRKCA "Protein kinase C alpha type" [Bos taurus (taxid:9913)]

 Score = 249 (92.7 bits), Expect = 3.0e-20, P = 3.0e-20
 Identities = 43/52 (82%), Positives = 48/52 (92%)

Query:    37 QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
             +II YQPYGKSVDWWAYGVLLYEML GQPPFDGEDE+ELF +I +H+VSYPK
Sbjct:   508 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK 559

GO:0005515 "protein binding" evidence=IPI

GO:0097110 "scaffold protein binding" evidence=IPI

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0004697 "protein kinase C activity" evidence=IDA

GO:0007194 "negative regulation of adenylate cyclase activity" evidence=IDA

GO:0007190 "activation of adenylate cyclase activity" evidence=IDA

GO:0031666 "positive regulation of lipopolysaccharide-mediated signaling pathway" evidence=ISS

GO:2000707 "positive regulation of dense core granule biogenesis" evidence=ISS

GO:0090330 "regulation of platelet aggregation" evidence=ISS

GO:0045651 "positive regulation of macrophage differentiation" evidence=ISS

GO:0045931 "positive regulation of mitotic cell cycle" evidence=ISS

GO:0045785 "positive regulation of cell adhesion" evidence=ISS

GO:0045766 "positive regulation of angiogenesis" evidence=ISS

GO:0034351 "negative regulation of glial cell apoptotic process" evidence=ISS

GO:0010595 "positive regulation of endothelial cell migration" evidence=ISS

GO:0001938 "positive regulation of endothelial cell proliferation" evidence=ISS

GO:0048471 "perinuclear region of cytoplasm" evidence=ISS

GO:0005829 "cytosol" evidence=ISS

GO:0070374 "positive regulation of ERK1 and ERK2 cascade" evidence=ISS

GO:0010613 "positive regulation of cardiac muscle hypertrophy" evidence=ISS

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|P17252 PRKCA "Protein kinase C alpha type" [Homo sapiens (taxid:9606)]

 Score = 249 (92.7 bits), Expect = 3.0e-20, P = 3.0e-20
 Identities = 43/52 (82%), Positives = 48/52 (92%)

Query:    37 QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
             +II YQPYGKSVDWWAYGVLLYEML GQPPFDGEDE+ELF +I +H+VSYPK
Sbjct:   508 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK 559

GO:0008270 "zinc ion binding" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0000188 "inactivation of MAPK activity" evidence=IEA

GO:0001750 "photoreceptor outer segment" evidence=IEA

GO:0001934 "positive regulation of protein phosphorylation" evidence=IEA

GO:0002026 "regulation of the force of heart contraction" evidence=IEA

GO:0002062 "chondrocyte differentiation" evidence=IEA

GO:0004698 "calcium-dependent protein kinase C activity" evidence=IEA

GO:0006874 "cellular calcium ion homeostasis" evidence=IEA

GO:0006937 "regulation of muscle contraction" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0030425 "dendrite" evidence=IEA

GO:0030593 "neutrophil chemotaxis" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0046325 "negative regulation of glucose import" evidence=IEA

GO:0046627 "negative regulation of insulin receptor signaling pathway" evidence=IEA

GO:0050729 "positive regulation of inflammatory response" evidence=IEA

GO:0050730 "regulation of peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0050930 "induction of positive chemotaxis" evidence=IEA

GO:0071322 "cellular response to carbohydrate stimulus" evidence=IEA

GO:0097193 "intrinsic apoptotic signaling pathway" evidence=IEA

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0043536 "positive regulation of blood vessel endothelial cell migration" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0005829 "cytosol" evidence=IDA;TAS

GO:0005886 "plasma membrane" evidence=IDA;TAS

GO:0035403 "histone kinase activity (H3-T6 specific)" evidence=IDA

GO:0035408 "histone H3-T6 phosphorylation" evidence=IDA

GO:0034351 "negative regulation of glial cell apoptotic process" evidence=IMP

GO:0045931 "positive regulation of mitotic cell cycle" evidence=IMP

GO:0010595 "positive regulation of endothelial cell migration" evidence=IMP

GO:0045785 "positive regulation of cell adhesion" evidence=IMP

GO:0001938 "positive regulation of endothelial cell proliferation" evidence=IMP

GO:0045766 "positive regulation of angiogenesis" evidence=IMP

GO:0090330 "regulation of platelet aggregation" evidence=IDA

GO:0010613 "positive regulation of cardiac muscle hypertrophy" evidence=ISS

GO:0070374 "positive regulation of ERK1 and ERK2 cascade" evidence=ISS

GO:0048471 "perinuclear region of cytoplasm" evidence=ISS

GO:0004672 "protein kinase activity" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0045651 "positive regulation of macrophage differentiation" evidence=ISS

GO:2000707 "positive regulation of dense core granule biogenesis" evidence=ISS

GO:0031666 "positive regulation of lipopolysaccharide-mediated signaling pathway" evidence=IMP

GO:0097190 "apoptotic signaling pathway" evidence=TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=TAS

GO:0004697 "protein kinase C activity" evidence=ISS;TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0006112 "energy reserve metabolic process" evidence=TAS

GO:0007165 "signal transduction" evidence=TAS

GO:0007173 "epidermal growth factor receptor signaling pathway" evidence=TAS

GO:0007202 "activation of phospholipase C activity" evidence=TAS

GO:0007268 "synaptic transmission" evidence=TAS

GO:0007596 "blood coagulation" evidence=TAS

GO:0008543 "fibroblast growth factor receptor signaling pathway" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

GO:0016070 "RNA metabolic process" evidence=TAS

GO:0016071 "mRNA metabolic process" evidence=TAS

GO:0030168 "platelet activation" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0048011 "neurotrophin TRK receptor signaling pathway" evidence=TAS

GO:0050796 "regulation of insulin secretion" evidence=TAS

GO:0019899 "enzyme binding" evidence=IPI

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0007190 "activation of adenylate cyclase activity" evidence=ISS

GO:0007194 "negative regulation of adenylate cyclase activity" evidence=ISS

GO:0002159 "desmosome assembly" evidence=IMP

GO:0070555 "response to interleukin-1" evidence=IMP

UNIPROTKB|P10102 PRKCA "Protein kinase C alpha type" [Oryctolagus cuniculus (taxid:9986)]

 Score = 249 (92.7 bits), Expect = 3.0e-20, P = 3.0e-20
 Identities = 43/52 (82%), Positives = 48/52 (92%)

Query:    37 QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
             +II YQPYGKSVDWWAYGVLLYEML GQPPFDGEDE+ELF +I +H+VSYPK
Sbjct:   508 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK 559

GO:0001938 "positive regulation of endothelial cell proliferation" evidence=ISS

GO:0005829 "cytosol" evidence=ISS

GO:0010595 "positive regulation of endothelial cell migration" evidence=ISS

GO:0010613 "positive regulation of cardiac muscle hypertrophy" evidence=ISS

GO:0031666 "positive regulation of lipopolysaccharide-mediated signaling pathway" evidence=ISS

GO:0034351 "negative regulation of glial cell apoptotic process" evidence=ISS

GO:0045651 "positive regulation of macrophage differentiation" evidence=ISS

GO:0045766 "positive regulation of angiogenesis" evidence=ISS

GO:0045785 "positive regulation of cell adhesion" evidence=ISS

GO:0045931 "positive regulation of mitotic cell cycle" evidence=ISS

GO:0048471 "perinuclear region of cytoplasm" evidence=ISS

GO:0070374 "positive regulation of ERK1 and ERK2 cascade" evidence=ISS

GO:0090330 "regulation of platelet aggregation" evidence=ISS

GO:2000707 "positive regulation of dense core granule biogenesis" evidence=ISS

MGI|MGI:97595 Prkca "protein kinase C, alpha" [Mus musculus (taxid:10090)]

 Score = 249 (92.7 bits), Expect = 3.0e-20, P = 3.0e-20
 Identities = 43/52 (82%), Positives = 48/52 (92%)

Query:    37 QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
             +II YQPYGKSVDWWAYGVLLYEML GQPPFDGEDE+ELF +I +H+VSYPK
Sbjct:   508 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK 559

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000188 "inactivation of MAPK activity" evidence=IMP

GO:0000302 "response to reactive oxygen species" evidence=ISO

GO:0001525 "angiogenesis" evidence=IEA

GO:0001750 "photoreceptor outer segment" evidence=IDA

GO:0001933 "negative regulation of protein phosphorylation" evidence=IMP

GO:0001934 "positive regulation of protein phosphorylation" evidence=IMP

GO:0001938 "positive regulation of endothelial cell proliferation" evidence=ISO

GO:0002026 "regulation of the force of heart contraction" evidence=IMP

GO:0002062 "chondrocyte differentiation" evidence=IDA

GO:0002159 "desmosome assembly" evidence=ISO

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0004697 "protein kinase C activity" evidence=ISO;IDA

GO:0004698 "calcium-dependent protein kinase C activity" evidence=ISO;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005829 "cytosol" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0006468 "protein phosphorylation" evidence=ISO;IDA

GO:0006469 "negative regulation of protein kinase activity" evidence=IMP

GO:0006874 "cellular calcium ion homeostasis" evidence=IMP

GO:0006915 "apoptotic process" evidence=IEA

GO:0006937 "regulation of muscle contraction" evidence=IMP

GO:0007155 "cell adhesion" evidence=IEA

GO:0007611 "learning or memory" evidence=ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IGI

GO:0010595 "positive regulation of endothelial cell migration" evidence=ISO

GO:0010613 "positive regulation of cardiac muscle hypertrophy" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0017148 "negative regulation of translation" evidence=ISO

GO:0018105 "peptidyl-serine phosphorylation" evidence=ISO

GO:0018107 "peptidyl-threonine phosphorylation" evidence=ISO

GO:0019899 "enzyme binding" evidence=ISO

GO:0021955 "central nervous system neuron axonogenesis" evidence=ISO

GO:0030425 "dendrite" evidence=IDA

GO:0030593 "neutrophil chemotaxis" evidence=IMP

GO:0031666 "positive regulation of lipopolysaccharide-mediated signaling pathway" evidence=ISO

GO:0032355 "response to estradiol stimulus" evidence=ISO

GO:0034351 "negative regulation of glial cell apoptotic process" evidence=ISO

GO:0035403 "histone kinase activity (H3-T6 specific)" evidence=ISO

GO:0035408 "histone H3-T6 phosphorylation" evidence=ISO

GO:0035556 "intracellular signal transduction" evidence=ISO

GO:0043005 "neuron projection" evidence=ISO

GO:0043025 "neuronal cell body" evidence=IDA

GO:0043234 "protein complex" evidence=ISO

GO:0043536 "positive regulation of blood vessel endothelial cell migration" evidence=ISO

GO:0045121 "membrane raft" evidence=ISO

GO:0045471 "response to ethanol" evidence=ISO

GO:0045651 "positive regulation of macrophage differentiation" evidence=IMP

GO:0045766 "positive regulation of angiogenesis" evidence=ISO

GO:0045785 "positive regulation of cell adhesion" evidence=ISO

GO:0045822 "negative regulation of heart contraction" evidence=ISO

GO:0045921 "positive regulation of exocytosis" evidence=ISO

GO:0045931 "positive regulation of mitotic cell cycle" evidence=ISO

GO:0046325 "negative regulation of glucose import" evidence=IMP

GO:0046627 "negative regulation of insulin receptor signaling pathway" evidence=IMP

GO:0046777 "protein autophosphorylation" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0048259 "regulation of receptor-mediated endocytosis" evidence=ISO

GO:0048471 "perinuclear region of cytoplasm" evidence=ISO

GO:0048661 "positive regulation of smooth muscle cell proliferation" evidence=ISO

GO:0050729 "positive regulation of inflammatory response" evidence=IMP

GO:0050730 "regulation of peptidyl-tyrosine phosphorylation" evidence=IMP

GO:0050930 "induction of positive chemotaxis" evidence=IMP

GO:0051965 "positive regulation of synapse assembly" evidence=ISO

GO:0070374 "positive regulation of ERK1 and ERK2 cascade" evidence=ISO

GO:0070555 "response to interleukin-1" evidence=ISO

GO:0071322 "cellular response to carbohydrate stimulus" evidence=IDA

GO:0090330 "regulation of platelet aggregation" evidence=ISO;IMP

GO:0097193 "intrinsic apoptotic signaling pathway" evidence=IMP

GO:2000707 "positive regulation of dense core granule biogenesis" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P20444	KPCA_MOUSE	2, ., 7, ., 1, 1, ., 1, 3	0.8269	0.5652	0.0773	yes	N/A
P36583	PCK2_SCHPO	2, ., 7, ., 1, 1, ., 1, 3	0.6078	0.5543	0.0501	yes	N/A
P04409	KPCA_BOVIN	2, ., 7, ., 1, 1, ., 1, 3	0.8269	0.5652	0.0773	yes	N/A
P10102	KPCA_RABIT	2, ., 7, ., 1, 1, ., 1, 3	0.8269	0.5652	0.0773	yes	N/A
P05696	KPCA_RAT	2, ., 7, ., 1, 1, ., 1, 3	0.8269	0.5652	0.0773	yes	N/A
P63319	KPCG_RAT	2, ., 7, ., 1, 1, ., 1, 3	0.7884	0.5652	0.0746	yes	N/A
P90980	KPC2_CAEEL	2, ., 7, ., 1, 1, ., 1, 3	0.8653	0.5652	0.0762	yes	N/A
P17252	KPCA_HUMAN	2, ., 7, ., 1, 1, ., 1, 3	0.8269	0.5652	0.0773	yes	N/A
P05130	KPC1_DROME	2, ., 7, ., 1, 1, ., 1, 3	0.9615	0.5652	0.0765	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	92
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	2e-34
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	6e-29
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	1e-26
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	7e-26
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	5e-20
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	8e-20
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	1e-18
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	2e-18
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	3e-18
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	4e-16
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	9e-16
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	9e-16
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	2e-15
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	5e-15
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	4e-14
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	1e-12
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-12
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	6e-12
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	8e-12
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-11
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	8e-11
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-10
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	1e-10
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	1e-10
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	2e-10
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	2e-10
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	3e-10
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	3e-10
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	3e-10
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	4e-10
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	4e-10
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	4e-10
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	5e-10
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	2e-09
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	3e-09
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	3e-09
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	3e-09
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	4e-09
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	5e-09
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	8e-09
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	9e-09
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	9e-09
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-08
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	1e-08
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	1e-08
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	2e-08
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	2e-08
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	3e-08
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	7e-08
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	9e-08
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	9e-08
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	1e-07
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	1e-07
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	2e-07
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	2e-07
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	3e-07
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	4e-07
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	5e-07
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	5e-07
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	8e-07
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	9e-07
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	9e-07
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	1e-06
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	2e-06
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	2e-06
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	3e-06
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	4e-06
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	4e-06
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	1e-05
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-05
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	1e-05
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	2e-05
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	2e-05
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	3e-05
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	3e-05
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	3e-05
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	3e-05
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	3e-05
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	5e-05
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	5e-05
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	5e-05
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	9e-05
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	1e-04
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	2e-04
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	2e-04
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-04
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	3e-04
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	4e-04
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	5e-04
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	5e-04
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	6e-04
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	7e-04
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	8e-04
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	8e-04
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	9e-04
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	0.001
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	0.001
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	0.001
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	0.001
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	0.002
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	0.002
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	0.002
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	0.002
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	0.002
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	0.003
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	0.004
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	0.004
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	0.004

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score =  119 bits (300), Expect = 2e-34
 Identities = 42/52 (80%), Positives = 48/52 (92%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +II YQPYGKSVDWWA+GVLLYEML GQPPFDGEDE+ELF +I +H+VSYPK
Sbjct: 171 EIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK 222

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score =  105 bits (262), Expect = 6e-29
 Identities = 43/52 (82%), Positives = 48/52 (92%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +II YQPYGKSVDWWAYGVLLYEML GQPPFDGEDE+ELF +I +H+VSYPK
Sbjct: 171 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK 222

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 99.3 bits (247), Expect = 1e-26
 Identities = 39/52 (75%), Positives = 47/52 (90%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +II YQPYGKSVDWWA+GVLLYEML GQ PF+GEDE+ELF +I +H+V+YPK
Sbjct: 171 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK 222

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 97.1 bits (242), Expect = 7e-26
 Identities = 33/52 (63%), Positives = 42/52 (80%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +I+ YQPYG +VDWWA GVLLYEML GQ PF+G+DE+ELF +I +  V YP+
Sbjct: 166 EILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPR 217

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 80.3 bits (199), Expect = 5e-20
 Identities = 25/51 (49%), Positives = 37/51 (72%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           ++L + YGK+VDWW+ GVLLYEML G+PPF  ED +E++  I    + +P+
Sbjct: 164 VLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPE 214

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 80.9 bits (200), Expect = 8e-20
 Identities = 26/51 (50%), Positives = 37/51 (72%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +++    Y ++VDWW  GVL+YEMLVG+ PF G+DEEE+F +I +  V YP
Sbjct: 171 EVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYP 221

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 77.5 bits (191), Expect = 1e-18
 Identities = 29/52 (55%), Positives = 40/52 (76%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +I+  Q Y +SVDWW++GVLLYEML+GQ PF GEDE+ELF +I +    +P+
Sbjct: 166 EILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPR 217

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 76.8 bits (189), Expect = 2e-18
 Identities = 27/51 (52%), Positives = 37/51 (72%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +I+    YG SVDWWA GVL+YEM+ GQPPF+ ++E++LF +I    V YP
Sbjct: 166 EILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYP 216

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 76.5 bits (188), Expect = 3e-18
 Identities = 31/52 (59%), Positives = 39/52 (75%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +I+L Q Y  SVDWW++GVLLYEML+GQ PF G DEEELF +I   +  YP+
Sbjct: 166 EILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPR 217

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 70.7 bits (173), Expect = 4e-16
 Identities = 28/52 (53%), Positives = 38/52 (73%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +I+    Y  SVDWW++GVLLYEML+GQ PF G+DE+ELF +I   +  YP+
Sbjct: 166 EILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPR 217

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 69.2 bits (170), Expect = 9e-16
 Identities = 25/52 (48%), Positives = 36/52 (69%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           ++IL Q + K+VDWW+ G +LYE LVG PPF GE  EE+F  I +  + +P+
Sbjct: 171 EVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPE 222

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 69.4 bits (170), Expect = 9e-16
 Identities = 26/51 (50%), Positives = 34/51 (66%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           ++IL Q YGK VDWWA G++LYE LVG  PF G+  EELF  +    + +P
Sbjct: 186 EVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWP 236

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 68.4 bits (167), Expect = 2e-15
 Identities = 29/51 (56%), Positives = 36/51 (70%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +I+    YG SVDWWA GVLLYEML G  PF+ E+E++LF AI +  V YP
Sbjct: 166 EILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP 216

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 67.2 bits (165), Expect = 5e-15
 Identities = 24/51 (47%), Positives = 35/51 (68%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           IIL + YGK+VDWWA G+L+YEML G PPF  ++  +++  I +  V +P 
Sbjct: 169 IILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPS 219

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 64.5 bits (158), Expect = 4e-14
 Identities = 19/38 (50%), Positives = 29/38 (76%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL 75
           ++L + YGK+VD W+ GV+LYE+L G+PPF G+D+   
Sbjct: 167 VLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLE 204

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 60.5 bits (147), Expect = 1e-12
 Identities = 20/52 (38%), Positives = 34/52 (65%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           ++I  + + K+VDWWA G+L+YEMLVG PPF  ++   ++  I    + +P+
Sbjct: 168 EVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR 219

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 60.3 bits (147), Expect = 2e-12
 Identities = 21/51 (41%), Positives = 30/51 (58%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           ++  +P GKS D WA G ++Y+ML G+PPF G +E   F  I     S+P 
Sbjct: 193 LLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFPP 243

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 59.2 bits (144), Expect = 6e-12
 Identities = 20/48 (41%), Positives = 28/48 (58%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVS 85
           ++   PYG   DWW+ GV+LYEML G PPF  +  +E +  I +   S
Sbjct: 201 VLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKES 248

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 58.8 bits (143), Expect = 8e-12
 Identities = 21/47 (44%), Positives = 29/47 (61%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPKMA 90
           +G +VDWW  G+LLYEML G  PF G + +E F+ I    V++P   
Sbjct: 209 HGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSP 255

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 5/56 (8%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE---DEEELFAAI--TDHSVSYPK 88
           ++    YG  VD W+ GV+LYE+L G+PPF GE   D+ +L   I         PK
Sbjct: 170 LLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPK 225

Length = 260

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 56.0 bits (135), Expect = 8e-11
 Identities = 20/43 (46%), Positives = 28/43 (65%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +++  QPY ++VDWW  G +LYEML G PPF   D  E++  I
Sbjct: 166 EVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNI 208

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 55.3 bits (134), Expect = 1e-10
 Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 4/56 (7%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEE--ELFAAITDHS--VSYPK 88
           +IIL + Y  SVD+W+ G+LLYE+L G+PPF  +DE+  E++  I   +  + +P 
Sbjct: 162 EIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPN 217

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 19/37 (51%), Positives = 24/37 (64%)

Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL 75
           I    Y  S DWWA GVL YE+L G+ PF  +++EEL
Sbjct: 178 IKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEEL 214

Length = 267

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 55.2 bits (133), Expect = 1e-10
 Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 9/85 (10%)

Query: 11  TLSHQDKIRPGRGSNPRPSAYSI------LLFQIILYQPYGKSVDWWAYGVLLYEMLVGQ 64
           T+S +D+I   +  N R  AYS       +  +I L Q YG+  DWW+ G +++E L+G 
Sbjct: 187 TMSSKDQIATWK-KNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGW 245

Query: 65  PPFDGEDEEELFAAITD--HSVSYP 87
           PPF  E+  E +  I +   ++ +P
Sbjct: 246 PPFCSENSHETYRKIINWRETLYFP 270

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 55.3 bits (133), Expect = 2e-10
 Identities = 21/51 (41%), Positives = 35/51 (68%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +++L +P+G +VDWWA GV L+E L G PPF+ E  +++F  I +  + +P
Sbjct: 550 ELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWP 600

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 54.9 bits (132), Expect = 2e-10
 Identities = 23/51 (45%), Positives = 32/51 (62%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +++L   Y K+VDWW  GVLLYEML G PPF  E+  E++  I    + +P
Sbjct: 163 ELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFP 213

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 54.6 bits (131), Expect = 3e-10
 Identities = 20/45 (44%), Positives = 30/45 (66%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           YG++VDWW  GV++YEM+ G+ PF  +D E LF  I    + +P+
Sbjct: 172 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 216

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 54.4 bits (131), Expect = 3e-10
 Identities = 20/45 (44%), Positives = 31/45 (68%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           YG++VDWW  GV++YEM+ G+ PF  +D E+LF  I    + +P+
Sbjct: 172 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 216

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 54.1 bits (130), Expect = 3e-10
 Identities = 19/52 (36%), Positives = 30/52 (57%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           ++I  + +GK+VDWW  GVLLYE + G PPF  +    ++  I    + +P 
Sbjct: 185 EVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN 236

Length = 329

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 54.4 bits (131), Expect = 4e-10
 Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 2/46 (4%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH--SVSYP 87
           YG+  DWW+ GV LYEMLVG  PF  +     ++ I DH  S+++P
Sbjct: 224 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFP 269

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 54.3 bits (130), Expect = 4e-10
 Identities = 20/45 (44%), Positives = 31/45 (68%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           YG++VDWW  GV++YEM+ G+ PF  +D E+LF  I    + +P+
Sbjct: 172 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPR 216

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 54.3 bits (130), Expect = 4e-10
 Identities = 20/45 (44%), Positives = 31/45 (68%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           YG++VDWW  GV++YEM+ G+ PF  +D E+LF  I    + +P+
Sbjct: 173 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 217

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 53.3 bits (129), Expect = 5e-10
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +   +PY    D W+ G +LYE+   + PF+GE+  EL   I
Sbjct: 174 LCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKI 215

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 52.4 bits (126), Expect = 2e-09
 Identities = 17/31 (54%), Positives = 23/31 (74%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE 74
           Y K  DWW+ GV++YEMLVG PPF  ++ +E
Sbjct: 216 YNKECDWWSLGVIMYEMLVGYPPFCSDNPQE 246

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 51.3 bits (123), Expect = 3e-09
 Identities = 19/51 (37%), Positives = 32/51 (62%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +I++   +GK+VDWW+ G L+Y+ML G PPF  E+ ++    I    ++ P
Sbjct: 170 EILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLP 220

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 51.6 bits (123), Expect = 3e-09
 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 7/81 (8%)

Query: 15  QDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPF------- 67
           ++ + PG  ++      + +  +I+  + YG SVDWWA GVL++EM+ G+ PF       
Sbjct: 144 KEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNP 203

Query: 68  DGEDEEELFAAITDHSVSYPK 88
           D   E+ LF  I +  +  P+
Sbjct: 204 DMNTEDYLFQVILEKPIRIPR 224

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 51.3 bits (123), Expect = 3e-09
 Identities = 17/55 (30%), Positives = 28/55 (50%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPKMAV 91
           + IL     K  DWW+ G +++E L G PPF  E  + +F  I    +++P+   
Sbjct: 163 ETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVK 217

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 51.2 bits (122), Expect = 4e-09
 Identities = 21/43 (48%), Positives = 27/43 (62%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           ++I  QPY  +VDWW  G +LYEML G PPF   D  E++  I
Sbjct: 166 EVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNI 208

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 51.0 bits (122), Expect = 5e-09
 Identities = 18/31 (58%), Positives = 24/31 (77%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPF 67
           +++L   Y +  DWW+ GV+LYEMLVGQPPF
Sbjct: 214 EVLLRTGYTQLCDWWSVGVILYEMLVGQPPF 244

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 50.4 bits (120), Expect = 8e-09
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 9/83 (10%)

Query: 15  QDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPF------- 67
           ++ +RPG  ++      + +  +I+  + YG SVDWWA GVL++EM+ G+ PF       
Sbjct: 144 KEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 203

Query: 68  --DGEDEEELFAAITDHSVSYPK 88
             D   E+ LF  I +  +  P+
Sbjct: 204 NPDQNTEDYLFQVILEKQIRIPR 226

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 50.4 bits (120), Expect = 9e-09
 Identities = 19/51 (37%), Positives = 30/51 (58%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +++  +PY ++VDWW  G +LYEML G PPF   D  +++  I    +  P
Sbjct: 166 EVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP 216

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 50.2 bits (120), Expect = 9e-09
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 9/61 (14%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFD---------GEDEEELFAAITDHSVSYP 87
           +I+  + YG SVDWWA GVL++EM+ G+ PFD            E+ LF  I +  +  P
Sbjct: 166 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP 225

Query: 88  K 88
           +
Sbjct: 226 R 226

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 49.6 bits (119), Expect = 1e-08
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG---EDEEELFAAITDHSVSYPK 88
           +++  Q Y  +VDWW+ GV  YE L G+ P+ G      +++ A      V YP 
Sbjct: 169 EVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPA 223

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 49.8 bits (119), Expect = 1e-08
 Identities = 18/52 (34%), Positives = 32/52 (61%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +++  + + +S DWW++GVL++EML G  PF G+D +E    I    +  P+
Sbjct: 168 EVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQ 219

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 49.6 bits (118), Expect = 1e-08
 Identities = 19/43 (44%), Positives = 28/43 (65%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +++  QPY ++VDWW  G +LYEML G PPF   +  E++  I
Sbjct: 166 EVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI 208

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 49.3 bits (118), Expect = 2e-08
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 42  QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           + Y  +VD+W+ G +LYE L G PPF G    E +  +
Sbjct: 173 KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENL 210

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 49.2 bits (117), Expect = 2e-08
 Identities = 19/52 (36%), Positives = 32/52 (61%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +I+L   +GK+ DWW  G+ +YE+LVG PPF   +   ++  I +  + +PK
Sbjct: 198 EILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPK 249

Length = 340

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 48.8 bits (116), Expect = 3e-08
 Identities = 19/45 (42%), Positives = 28/45 (62%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           Y K VD+W+ GVL++EM  G  PF  ED ++++  I    V +PK
Sbjct: 174 YTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPK 218

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 47.5 bits (113), Expect = 7e-08
 Identities = 18/39 (46%), Positives = 23/39 (58%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH 82
           YG   DWW+ GV +YEML G+ PF  E   E +  I +H
Sbjct: 185 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 223

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 47.4 bits (112), Expect = 9e-08
 Identities = 17/45 (37%), Positives = 28/45 (62%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD 81
           ++ +   Y K  DWW+ GV++YEML+G PPF  E  +E +  + +
Sbjct: 206 EVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMN 250

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 47.3 bits (112), Expect = 9e-08
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH--SVSYPK 88
           YG+  DWW+ GV L+EMLVG  PF  +     ++ I DH  S+++P+
Sbjct: 224 YGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPE 270

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 47.3 bits (112), Expect = 1e-07
 Identities = 18/31 (58%), Positives = 24/31 (77%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPF 67
           +++L   Y +  DWW+ GV+LYEMLVGQPPF
Sbjct: 218 EVLLRTGYTQLCDWWSVGVILYEMLVGQPPF 248

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 47.3 bits (112), Expect = 1e-07
 Identities = 17/31 (54%), Positives = 25/31 (80%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPF 67
           +++L + Y +  DWW+ GV+L+EMLVGQPPF
Sbjct: 218 EVLLRKGYTQLCDWWSVGVILFEMLVGQPPF 248

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 46.6 bits (110), Expect = 2e-07
 Identities = 17/45 (37%), Positives = 28/45 (62%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD 81
           ++ +   Y K  DWW+ GV++YEML+G PPF  E  +E +  + +
Sbjct: 206 EVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMN 250

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 46.5 bits (110), Expect = 2e-07
 Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 2/46 (4%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH--SVSYP 87
           YG+  DWW+ GV LYEMLVG  PF  +     ++ I +H  S+++P
Sbjct: 224 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFP 269

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 45.5 bits (108), Expect = 3e-07
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 42  QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL 75
           +PY    D W+ G LLYEM    PPF+    ++L
Sbjct: 176 RPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDL 209

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 45.8 bits (108), Expect = 4e-07
 Identities = 18/39 (46%), Positives = 23/39 (58%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH 82
           YG   DWW+ GV +YEML G+ PF  E   E +  I +H
Sbjct: 185 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 223

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 45.4 bits (107), Expect = 5e-07
 Identities = 18/39 (46%), Positives = 23/39 (58%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH 82
           YG   DWW+ GV +YEML G+ PF  E   E +  I +H
Sbjct: 185 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 223

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 45.2 bits (107), Expect = 5e-07
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEE----ELFAAITDHSVSYPK 88
           + K+VDWW+ GVL +E+L G  PF  + E+    E+   I      +PK
Sbjct: 185 HDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPK 233

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 44.8 bits (106), Expect = 8e-07
 Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 4/55 (7%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPF----DGEDEEELFAAITDHSVSYP 87
           +++  + Y  SVDW+A G  LYEM+ G+ PF    +  ++EEL     + +V YP
Sbjct: 164 EVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYP 218

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 44.4 bits (105), Expect = 9e-07
 Identities = 14/37 (37%), Positives = 22/37 (59%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEE 73
           +++  + Y  S DWW  G L+YEM+ G+ PF    E+
Sbjct: 171 EVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK 207

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 44.7 bits (104), Expect = 9e-07
 Identities = 14/51 (27%), Positives = 22/51 (43%)

Query: 32  SILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH 82
           +  +   +       S D W+ G+ LYE+L G PPF+GE      +     
Sbjct: 176 APEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKI 226

Length = 384

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 44.1 bits (104), Expect = 1e-06
 Identities = 18/33 (54%), Positives = 24/33 (72%)

Query: 43  PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL 75
           PY K  D ++ GVLLYE+L  + PFDGE+ EE+
Sbjct: 221 PYSKKADMFSLGVLLYELLTLKRPFDGENMEEV 253

Length = 496

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 43.4 bits (102), Expect = 2e-06
 Identities = 16/37 (43%), Positives = 23/37 (62%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEE 73
           +++  Q Y  S D+W  G L+YEM+ GQ PF G  E+
Sbjct: 171 EVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK 207

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 43.5 bits (102), Expect = 2e-06
 Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 1/41 (2%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE-EELF 76
           +++L  PYGK+VD W+ G +L E+  GQP F GE E ++LF
Sbjct: 171 ELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLF 211

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 43.1 bits (101), Expect = 3e-06
 Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 4/49 (8%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPF--DGED--EEELFAAITDHSVSYPK 88
           + K+VDWW+ GVL+YE+L G  PF  DGE   + E+   I      YP+
Sbjct: 185 HDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ 233

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 42.6 bits (100), Expect = 4e-06
 Identities = 17/57 (29%), Positives = 30/57 (52%)

Query: 17  KIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEE 73
           +++ G+    R      +  +I+  +PY   VDW+A G  +YEM+ G+ PF    E+
Sbjct: 144 ELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 42.6 bits (100), Expect = 4e-06
 Identities = 15/29 (51%), Positives = 22/29 (75%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDE 72
           +GK+VDWW+ G+L++E+L G  PF  E E
Sbjct: 184 HGKAVDWWSLGILIFELLTGASPFTLEGE 212

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 41.7 bits (98), Expect = 1e-05
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH--SVSYP 87
           YG   DWW+ GV+ YEM+ G+ PF      + +  I +    + +P
Sbjct: 186 YGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFP 231

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD 81
           YG  VD W+ G +L E+ +G+P F G  E E    I +
Sbjct: 179 YGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFE 216

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 41.2 bits (96), Expect = 1e-05
 Identities = 16/31 (51%), Positives = 21/31 (67%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPF 67
           +++  + Y  S DWWA G LLYEM+ GQ PF
Sbjct: 171 EVVKNERYTFSPDWWALGCLLYEMIAGQSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 16/37 (43%), Positives = 23/37 (62%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT 80
           YG++VD WA G L+ EML G+P F G+ + +    I 
Sbjct: 178 YGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHII 214

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 40.5 bits (95), Expect = 2e-05
 Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 1/36 (2%)

Query: 37  QIIL-YQPYGKSVDWWAYGVLLYEMLVGQPPFDGED 71
           +I+L +Q Y K++D W+ G +L E+L  +P F G+D
Sbjct: 179 EIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKD 214

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 40.3 bits (95), Expect = 3e-05
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 39  ILY--QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH 82
           +LY  + Y   VD WA G +  E+L G P F GE++ E  A +   
Sbjct: 171 LLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRT 216

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 40.2 bits (94), Expect = 3e-05
 Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 37  QIIL-YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD 81
           +I+L +Q Y   VD W+ G +  EML G+P F G+D    F+ ITD
Sbjct: 175 EIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITD 220

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 40.0 bits (94), Expect = 3e-05
 Identities = 14/30 (46%), Positives = 20/30 (66%)

Query: 43  PYGKSVDWWAYGVLLYEMLVGQPPFDGEDE 72
            YGK VD WA G ++ E+L G+P F G+ +
Sbjct: 178 NYGKPVDVWAIGCIMAELLDGEPLFPGDSD 207

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 40.1 bits (94), Expect = 3e-05
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 39  ILYQP--YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD 81
           +L  P  Y K++D WA G +  EML G+P F G  E E    I +
Sbjct: 189 LLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILE 233

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 40.2 bits (94), Expect = 3e-05
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 42  QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +PY +  D WA GV+LYE   G+ PFD  ++  L   I
Sbjct: 176 KPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKI 213

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 39.4 bits (92), Expect = 5e-05
 Identities = 15/31 (48%), Positives = 22/31 (70%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPF 67
           +I+  +PYG+  D WA+G +LY+M   QPPF
Sbjct: 183 EIVKNEPYGEKADVWAFGCILYQMCTLQPPF 213

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 39.6 bits (92), Expect = 5e-05
 Identities = 16/37 (43%), Positives = 21/37 (56%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEE 73
           ++I  + Y  S DWW  G L+YEM+ GQ PF    E 
Sbjct: 171 EVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKER 207

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 39.5 bits (93), Expect = 5e-05
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL 75
           + + +  Y +  D W+ G L+YE+    PPF   ++ +L
Sbjct: 180 EQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQL 218

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 38.7 bits (90), Expect = 9e-05
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 42  QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           + YG+S D W+ G ++ EM   +PP++ E      A I
Sbjct: 183 EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALI 220

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 38.6 bits (90), Expect = 1e-04
 Identities = 13/31 (41%), Positives = 22/31 (70%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPF 67
           ++I   PYG  VD W+ G+++ EM+ G+PP+
Sbjct: 185 EVISRLPYGTEVDIWSLGIMVIEMVDGEPPY 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 38.1 bits (88), Expect = 2e-04
 Identities = 16/46 (34%), Positives = 27/46 (58%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH 82
           ++I   PYG  VD W+ G+++ EM+ G+PP+  E   +    I D+
Sbjct: 186 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 231

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 37.9 bits (88), Expect = 2e-04
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 4/55 (7%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPF--DGEDEE--ELFAAITDHSVSYP 87
           +++  + Y  SVD++A GV LYEM+  + PF   GE  E  EL   I + SV+YP
Sbjct: 167 ELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYP 221

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 37.7 bits (87), Expect = 2e-04
 Identities = 16/45 (35%), Positives = 26/45 (57%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD 81
           ++I   PYG  VD W+ G+++ EM+ G+PP+  E   +    I D
Sbjct: 188 EVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRD 232

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 37.3 bits (87), Expect = 3e-04
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDE-EELF 76
           Y   VD W+ G +  E+L  +P F G+ E ++LF
Sbjct: 176 YSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLF 209

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 42  QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           + YG++ D W+ G  + EM  G+PP+   +     AA+
Sbjct: 178 EEYGRAADIWSLGCTVIEMATGKPPW--SELGNPMAAL 213

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 36.8 bits (86), Expect = 5e-04
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPF 67
           ++I  +PY    D W+ G+   E+  G+PP+
Sbjct: 167 EVINGKPYDYKADIWSLGITAIELAEGKPPY 197

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 36.6 bits (85), Expect = 5e-04
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 39  ILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAIT 80
             +  +    D W++G+LLYEM   GQ P+ G +  E++  IT
Sbjct: 176 ASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT 218

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDE-EELF 76
           Y  +VD W+ G +  EM+ G+P F G+ E ++LF
Sbjct: 176 YSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLF 209

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 36.4 bits (85), Expect = 7e-04
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 46  KSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAITD 81
           KS D W++GVLL+E+   G  P+ G   EE+   +  
Sbjct: 187 KS-DVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK 222

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD 81
           I  + YG  VD W+ G++  EM  G+PP+  E        IT 
Sbjct: 188 IKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITT 230

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 36.2 bits (83), Expect = 8e-04
 Identities = 13/31 (41%), Positives = 22/31 (70%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPF 67
           ++I   PYG  VD W+ G+++ EM+ G+PP+
Sbjct: 187 EVISRTPYGTEVDIWSLGIMVIEMVDGEPPY 217

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 36.2 bits (83), Expect = 9e-04
 Identities = 12/35 (34%), Positives = 23/35 (65%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED 71
           +++  + YG  VD W+ G++  EM+ G+PP+  E+
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 35.6 bits (83), Expect = 0.001
 Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 39  ILYQPYGKSVDWWAYGVLLYEML-VGQPPFDGEDEEELFAAI 79
           +    +    D W++GVLL+E+  +G+ P+ G    E+   +
Sbjct: 176 LKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYL 217

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 35.9 bits (82), Expect = 0.001
 Identities = 12/35 (34%), Positives = 23/35 (65%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED 71
           +++  + YG  VD W+ G++  EM+ G+PP+  E+
Sbjct: 185 EVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 219

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 35.5 bits (81), Expect = 0.001
 Identities = 12/35 (34%), Positives = 23/35 (65%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED 71
           +++  + YG  VD W+ G++  EM+ G+PP+  E+
Sbjct: 185 EVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 219

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 35.2 bits (82), Expect = 0.001
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 2/35 (5%)

Query: 46  KSVDWWAYGVLLYEML-VGQPPFDGEDEEELFAAI 79
           KS D W++GVLL+E+  +G+ P+ G   EE+   +
Sbjct: 183 KS-DVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYL 216

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 35.4 bits (81), Expect = 0.002
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           Y K  D W+ GV+LYE+L    PF G  + E+   +
Sbjct: 248 YSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQV 283

Length = 478

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 35.2 bits (82), Expect = 0.002
 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)

Query: 46  KSVDWWAYGVLLYEML-VGQPPFDGEDEEELFAAITD 81
           KS D W++GVLL+E+  +G+ P+ G   EE+   + D
Sbjct: 184 KS-DVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLED 219

Length = 258

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 35.1 bits (81), Expect = 0.002
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDE 72
           Y  +VD W+ G +  E+L G+P F GE+E
Sbjct: 211 YHFAVDMWSVGCIFAELLTGKPLFPGENE 239

Length = 335

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 35.0 bits (81), Expect = 0.002
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGED 71
           Y K++D W+ G +L EML  +P F G+D
Sbjct: 187 YTKAIDIWSVGCILAEMLSNRPLFPGKD 214

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 34.9 bits (80), Expect = 0.002
 Identities = 12/35 (34%), Positives = 23/35 (65%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED 71
           +++  + YG  VD W+ G++  EM+ G+PP+  E+
Sbjct: 185 EVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 219

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 34.5 bits (80), Expect = 0.003
 Identities = 14/26 (53%), Positives = 18/26 (69%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDG 69
           Y K VD W+ G +L EML+G+P F G
Sbjct: 190 YTKGVDMWSVGCILGEMLLGKPLFPG 215

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 34.4 bits (80), Expect = 0.004
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 38  IIL-YQPYGKSVDWWAYGVLLYEMLVGQPPFDGED 71
           ++L    Y K++D W+ G +  E+L  +P F G D
Sbjct: 177 LLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRD 211

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 34.2 bits (78), Expect = 0.004
 Identities = 14/34 (41%), Positives = 22/34 (64%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED 71
           I+ +  Y ++VD W+ G ++ EML G+P F G D
Sbjct: 187 ILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHD 220

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 34.2 bits (79), Expect = 0.004
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD 81
           YG  +D WA G + +E+L   P F G +E +  A I D
Sbjct: 176 YGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHD 213

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	92
KOG0616|consensus	355		99.92
KOG0694|consensus	694		99.92
KOG0598|consensus	357		99.9
KOG0588|consensus	786		99.87
KOG0614|consensus	732		99.87
KOG0690|consensus	516		99.87
KOG0592|consensus	604		99.86
KOG0696|consensus	683		99.85
KOG0591|consensus	375		99.85
KOG0595|consensus	429		99.85
KOG0575|consensus	592		99.85
KOG0578|consensus	550		99.85
KOG0583|consensus	370		99.83
KOG0605|consensus	550		99.81
KOG4717|consensus	864		99.81
KOG0597|consensus	808		99.8
KOG0033|consensus	355		99.8
KOG0581|consensus	364		99.8
KOG0580|consensus	281		99.77
KOG0201|consensus	467		99.76
KOG0986|consensus	591		99.76
KOG0593|consensus	396		99.73
KOG0667|consensus	586		99.73
KOG0983|consensus	391		99.7
KOG0615|consensus	475		99.7
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.69
KOG0600|consensus	560		99.69
KOG0589|consensus	426		99.69
KOG0695|consensus	593		99.68
KOG0611|consensus	668		99.68
KOG0658|consensus	364		99.68
KOG0599|consensus	411		99.67
KOG0032|consensus	382		99.67
KOG0604|consensus	400		99.67
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.67
KOG0582|consensus	516		99.67
KOG0574|consensus	502		99.67
KOG0594|consensus	323		99.66
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.66
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.66
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.66
KOG4721|consensus	904		99.66
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.66
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.66
KOG0612|consensus	1317		99.66
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.65
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.65
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.65
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.65
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.65
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.65
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.64
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.64
KOG0192|consensus	362		99.64
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.64
KOG0610|consensus	459		99.64
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.64
KOG0197|consensus	468		99.63
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.63
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.63
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.63
KOG0585|consensus	576		99.62
KOG0671|consensus	415		99.62
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.62
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.62
KOG0660|consensus	359		99.62
KOG0579|consensus	1187		99.62
PTZ00284	467	protein kinase; Provisional	99.62
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.61
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.61
KOG0198|consensus	313		99.61
KOG0663|consensus	419		99.61
KOG0661|consensus	538		99.6
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.59
KOG0659|consensus	318		99.59
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.59
KOG0577|consensus	948		99.58
KOG1006|consensus	361		99.58
KOG0984|consensus	282		99.58
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.57
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.57
PTZ00036	440	glycogen synthase kinase; Provisional	99.57
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.57
PTZ00283	496	serine/threonine protein kinase; Provisional	99.57
PTZ00267	478	NIMA-related protein kinase; Provisional	99.56
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.56
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.56
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.56
KOG0586|consensus	596		99.56
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.55
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.55
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.55
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.55
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.54
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.54
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.54
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.54
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.53
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.53
KOG1026|consensus	774		99.53
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.53
KOG4645|consensus	1509		99.52
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.52
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.52
PHA02988	283	hypothetical protein; Provisional	99.51
KOG4279|consensus	1226		99.5
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.5
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.5
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.5
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.49
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.49
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.48
KOG1095|consensus	1025		99.48
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.48
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.48
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.47
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.47
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.47
KOG0587|consensus	953		99.46
PHA02882	294	putative serine/threonine kinase; Provisional	99.46
PHA03212	391	serine/threonine kinase US3; Provisional	99.45
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.45
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.44
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.44
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.44
KOG0603|consensus	612		99.44
KOG4236|consensus	888		99.44
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.42
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.42
KOG0596|consensus	677		99.42
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.42
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.42
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.41
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.4
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.4
KOG0669|consensus	376		99.4
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.4
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.4
PHA03207	392	serine/threonine kinase US3; Provisional	99.39
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.38
KOG0199|consensus	1039		99.38
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.38
KOG4257|consensus	974		99.37
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.37
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.37
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.36
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.36
KOG0665|consensus	369		99.36
KOG0608|consensus	1034		99.35
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.35
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.35
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.35
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.35
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.35
KOG0662|consensus	292		99.34
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.34
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.34
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.34
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.34
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.34
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.33
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.33
KOG4250|consensus	732		99.33
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.33
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.33
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.33
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.33
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.33
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.32
KOG0670|consensus	752		99.32
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.32
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.32
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.32
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.32
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.32
KOG0196|consensus	996		99.32
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.31
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.31
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.31
KOG0607|consensus	463		99.31
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.31
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.31
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.3
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.3
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.3
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.3
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.3
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.3
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.3
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.3
PHA03210	501	serine/threonine kinase US3; Provisional	99.3
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.29
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.29
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.29
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.29
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.29
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.29
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.28
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.28
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.28
KOG0200|consensus	609		99.28
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.28
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.28
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.28
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.28
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.28
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.28
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.27
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.27
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.27
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.27
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.27
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.27
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.27
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.27
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.27
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.27
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.27
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.26
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.26
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.26
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.26
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.26
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.25
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.25
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.25
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.25
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.25
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.25
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.25
KOG0194|consensus	474		99.24
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.24
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.24
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.24
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.24
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.24
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.24
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.24
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.24
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.24
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.24
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.24
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.24
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.24
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.24
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.24
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.23
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.23
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.23
PHA03211	461	serine/threonine kinase US3; Provisional	99.23
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.23
PHA03209	357	serine/threonine kinase US3; Provisional	99.23
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.23
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.23
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.23
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.23
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.22
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.22
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.22
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.22
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.22
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.21
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.21
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.21
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.21
KOG4278|consensus	1157		99.21
KOG1290|consensus	590		99.21
KOG0584|consensus	632		99.21
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.21
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.21
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.21
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.2
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.2
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.2
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.2
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.2
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.2
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.2
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.2
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.2
KOG0193|consensus	678		99.2
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.2
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.2
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.2
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.19
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.19
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.19
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.19
KOG0603|consensus	612		99.19
KOG0606|consensus	1205		99.19
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.19
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.19
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.18
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.18
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.18
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.18
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.18
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.18
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.18
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.18
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.18
KOG1989|consensus	738		99.17
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.17
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.17
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.17
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.17
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.17
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.17
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.16
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.16
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.16
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.16
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.16
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.16
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.16
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.16
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.16
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.15
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.15
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.15
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.15
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.15
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.15
KOG0666|consensus	438		99.15
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.15
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.15
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.15
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.15
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.15
PLN00009	294	cyclin-dependent kinase A; Provisional	99.15
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.15
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.15
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.14
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.14
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.13
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.13
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.13
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.13
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.13
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.13
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.12
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.12
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.12
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.12
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.12
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.11
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.11
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.11
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.11
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.1
PLN00181	793	protein SPA1-RELATED; Provisional	99.1
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.1
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.09
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.09
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.09
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.09
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.09
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.09
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.08
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.08
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.08
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.07
KOG0664|consensus	449		99.07
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.07
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.07
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.07
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.06
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.06
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.05
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.05
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.05
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.05
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.02
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.01
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.01
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.0
KOG0668|consensus	338		98.99
KOG1151|consensus	775		98.99
KOG1187|consensus	361		98.98
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	98.98
KOG0576|consensus	829		98.97
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	98.97
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	98.94
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	98.94
KOG1035|consensus	1351		98.93
KOG1024|consensus	563		98.92
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.91
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.9
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	98.88
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	98.87
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	98.84
KOG2345|consensus	302		98.83
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	98.83
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	98.8
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	98.79
KOG1152|consensus	772		98.77
KOG1025|consensus	1177		98.76
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	98.68
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.61
KOG1033|consensus	516		98.61
KOG3653|consensus	534		98.6
KOG1027|consensus	903		98.58
KOG1094|consensus	807		98.56
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	98.45
KOG2052|consensus	513		98.28
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.23
KOG0590|consensus	601		98.22
KOG0195|consensus	448		98.12
KOG0606|consensus	1205		97.98
KOG1164|consensus	322		97.91
KOG1345|consensus	378		97.9
KOG1167|consensus	418		97.72
KOG1165|consensus	449		97.63
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	97.45
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	97.36
KOG0590|consensus	601		97.33
KOG1163|consensus	341		97.07
KOG4158|consensus	598		96.74
KOG1023|consensus	484		96.52
KOG0576|consensus	829		95.12
COG4248	637	Uncharacterized protein with protein kinase and he	94.45
PRK12274	218	serine/threonine protein kinase; Provisional	94.05
KOG1166|consensus	974		93.79
KOG1240|consensus	1431		93.54
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	91.5
PRK09188	365	serine/threonine protein kinase; Provisional	91.25

>KOG0616|consensus

Probab=99.92  E-value=2e-25  Score=127.57  Aligned_cols=90  Identities=27%  Similarity=0.528  Sum_probs=83.8

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      |++.|.+|++|||+++.....  .-+.|||+.|+|||++...+|+..+|+|++|+++|||+.|.+||.+.++..++.+|.
T Consensus       177 lD~~G~iKitDFGFAK~v~~r--T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~  254 (355)
T KOG0616|consen  177 LDQNGHIKITDFGFAKRVSGR--TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKIL  254 (355)
T ss_pred             eccCCcEEEEeccceEEecCc--EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHH
Confidence            578999999999999886544  667899999999999999999999999999999999999999999999999999999


Q ss_pred             hCCCcCCCCCCC
Q psy8825          81 DHSVSYPKMAVF   92 (92)
Q Consensus        81 ~~~~~~p~~~~~   92 (92)
                      ++.+.||+++++
T Consensus       255 ~~~v~fP~~fs~  266 (355)
T KOG0616|consen  255 EGKVKFPSYFSS  266 (355)
T ss_pred             hCcccCCcccCH
Confidence            999999999874

>KOG0694|consensus

Probab=99.92  E-value=5.6e-25  Score=135.82  Aligned_cols=91  Identities=33%  Similarity=0.635  Sum_probs=86.1

Q ss_pred             CCCCCccccCCCccccccC-CCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIR-PGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~-~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      |+.+|.+||+|||+++.-. .+.+..|+|||+.|+|||++.+..|+..+|+|++|+++|+|+.|+.||.|++..+++..|
T Consensus       501 LD~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI  580 (694)
T KOG0694|consen  501 LDTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSI  580 (694)
T ss_pred             EcccCcEEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence            6889999999999998776 557888999999999999999999999999999999999999999999999999999999


Q ss_pred             HhCCCcCCCCCC
Q psy8825          80 TDHSVSYPKMAV   91 (92)
Q Consensus        80 ~~~~~~~p~~~~   91 (92)
                      ..+.+.+|.+++
T Consensus       581 ~~d~~~yP~~ls  592 (694)
T KOG0694|consen  581 VNDEVRYPRFLS  592 (694)
T ss_pred             hcCCCCCCCccc
Confidence            999999999886

>KOG0598|consensus

Probab=99.90  E-value=1.3e-23  Score=122.34  Aligned_cols=89  Identities=28%  Similarity=0.555  Sum_probs=79.9

Q ss_pred             CCCCCccccCCCcccccc-CCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKI-RPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~-~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      ||++|.++|+|||+++.. ..+....++|||+.|||||++...+|+..+|+|++|+++|+|++|.+||.+.+....+.+|
T Consensus       158 Ld~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I  237 (357)
T KOG0598|consen  158 LDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKI  237 (357)
T ss_pred             ecCCCcEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHH
Confidence            688999999999999844 4556777899999999999999999999999999999999999999999999999999999


Q ss_pred             HhCCCcCCCC
Q psy8825          80 TDHSVSYPKM   89 (92)
Q Consensus        80 ~~~~~~~p~~   89 (92)
                      ..+..+.|+.
T Consensus       238 ~~~k~~~~p~  247 (357)
T KOG0598|consen  238 LKGKLPLPPG  247 (357)
T ss_pred             hcCcCCCCCc
Confidence            9999544443

>KOG0588|consensus

Probab=99.87  E-value=2e-22  Score=124.76  Aligned_cols=92  Identities=20%  Similarity=0.367  Sum_probs=86.0

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      |++...+|++|||++....++...++.||++.|.+||++.+..| +...|+|++|++++.+++|.+||.+++-..++.++
T Consensus       145 Ld~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV  224 (786)
T KOG0588|consen  145 LDVKNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKV  224 (786)
T ss_pred             hhcccCEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHH
Confidence            34556699999999999999999999999999999999999999 78899999999999999999999999999999999


Q ss_pred             HhCCCcCCCCCCC
Q psy8825          80 TDHSVSYPKMAVF   92 (92)
Q Consensus        80 ~~~~~~~p~~~~~   92 (92)
                      .++.+.+|.++++
T Consensus       225 ~~G~f~MPs~Is~  237 (786)
T KOG0588|consen  225 QRGVFEMPSNISS  237 (786)
T ss_pred             HcCcccCCCcCCH
Confidence            9999999999874

>KOG0614|consensus

Probab=99.87  E-value=1.8e-22  Score=122.58  Aligned_cols=91  Identities=26%  Similarity=0.514  Sum_probs=85.3

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      |+.+|.+||+|||+++++..+.+.-++|||+.|+|||++...+.+.++|.|++|++++|+++|.+||.+.++...++.|.
T Consensus       553 Ld~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~IL  632 (732)
T KOG0614|consen  553 LDNRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLIL  632 (732)
T ss_pred             eccCCceEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH
Confidence            68899999999999999999998999999999999999999999999999999999999999999999999999999999


Q ss_pred             hC--CCcCCCCCC
Q psy8825          81 DH--SVSYPKMAV   91 (92)
Q Consensus        81 ~~--~~~~p~~~~   91 (92)
                      ++  .+.||++++
T Consensus       633 kGid~i~~Pr~I~  645 (732)
T KOG0614|consen  633 KGIDKIEFPRRIT  645 (732)
T ss_pred             hhhhhhhcccccc
Confidence            97  478888764

>KOG0690|consensus

Probab=99.87  E-value=1.9e-22  Score=117.56  Aligned_cols=92  Identities=24%  Similarity=0.498  Sum_probs=84.9

Q ss_pred             CCCCCccccCCCcccccc-CCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKI-RPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~-~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      |++||.+|++|||+++-- ..+...+++|||+.|+|||++....|++..|+|.+|+++|+|..|..||.+.++..++..|
T Consensus       301 LDkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLI  380 (516)
T KOG0690|consen  301 LDKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELI  380 (516)
T ss_pred             eccCCceEeeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHH
Confidence            689999999999998544 3456788999999999999999999999999999999999999999999999999999999


Q ss_pred             HhCCCcCCCCCCC
Q psy8825          80 TDHSVSYPKMAVF   92 (92)
Q Consensus        80 ~~~~~~~p~~~~~   92 (92)
                      ..+..+||+.++|
T Consensus       381 l~ed~kFPr~ls~  393 (516)
T KOG0690|consen  381 LMEDLKFPRTLSP  393 (516)
T ss_pred             HhhhccCCccCCH
Confidence            9999999998875

>KOG0592|consensus

Probab=99.86  E-value=4.1e-22  Score=121.06  Aligned_cols=92  Identities=23%  Similarity=0.422  Sum_probs=83.4

Q ss_pred             CCCCCccccCCCccccccCCCCC--------------CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCC
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRG--------------SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPP   66 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~--------------~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p   66 (92)
                      |++++.++++|||.++.+.+...              ..+++||..|++||++.....+...|+|.+||++|.|+.|.+|
T Consensus       207 Ld~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PP  286 (604)
T KOG0592|consen  207 LDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPP  286 (604)
T ss_pred             EcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCC
Confidence            57899999999999988764321              2568999999999999988889999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHhCCCcCCCCCCC
Q psy8825          67 FDGEDEEELFAAITDHSVSYPKMAVF   92 (92)
Q Consensus        67 ~~~~~~~~~~~~i~~~~~~~p~~~~~   92 (92)
                      |.+.++..++++|....|.||..+++
T Consensus       287 Fra~NeyliFqkI~~l~y~fp~~fp~  312 (604)
T KOG0592|consen  287 FRAANEYLIFQKIQALDYEFPEGFPE  312 (604)
T ss_pred             CccccHHHHHHHHHHhcccCCCCCCH
Confidence            99999999999999999999999874

>KOG0696|consensus

Probab=99.85  E-value=2.2e-21  Score=116.07  Aligned_cols=91  Identities=49%  Similarity=0.854  Sum_probs=83.7

Q ss_pred             CCCCCccccCCCccccc-cCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDK-IRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~-~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      |+.+|.+|++|||+++- ...+.+..++|||+-|+|||++.+..|+.++|+|++|++++||+.|++||.|++..++++.|
T Consensus       483 Ld~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI  562 (683)
T KOG0696|consen  483 LDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAI  562 (683)
T ss_pred             eccCCceEeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence            57899999999998754 34567788999999999999999999999999999999999999999999999999999999


Q ss_pred             HhCCCcCCCCCC
Q psy8825          80 TDHSVSYPKMAV   91 (92)
Q Consensus        80 ~~~~~~~p~~~~   91 (92)
                      .+....+|+.++
T Consensus       563 ~ehnvsyPKslS  574 (683)
T KOG0696|consen  563 MEHNVSYPKSLS  574 (683)
T ss_pred             HHccCcCccccc
Confidence            999999999875

>KOG0591|consensus

Probab=99.85  E-value=1.1e-21  Score=112.19  Aligned_cols=87  Identities=20%  Similarity=0.248  Sum_probs=79.2

Q ss_pred             CCCCCccccCCCccccccCCCCC-CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRG-SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~-~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      ++..|.+||.|||+++.+..... ..+.+|||.||+||.+...+|+.+.|+|++||+++||..-.+||.|.+-.++..+|
T Consensus       161 l~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI  240 (375)
T KOG0591|consen  161 LTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKI  240 (375)
T ss_pred             EcCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHH
Confidence            46788999999999999877654 55679999999999999999999999999999999999999999999999999999


Q ss_pred             HhCCCc-CC
Q psy8825          80 TDHSVS-YP   87 (92)
Q Consensus        80 ~~~~~~-~p   87 (92)
                      .++.++ +|
T Consensus       241 ~qgd~~~~p  249 (375)
T KOG0591|consen  241 EQGDYPPLP  249 (375)
T ss_pred             HcCCCCCCc
Confidence            999875 67

>KOG0595|consensus

Probab=99.85  E-value=1.1e-21  Score=115.89  Aligned_cols=81  Identities=25%  Similarity=0.469  Sum_probs=76.1

Q ss_pred             CccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Q psy8825           5 QPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSV   84 (92)
Q Consensus         5 ~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~~   84 (92)
                      ..+|++|||+++.+.++....+.||++.|||||++....|+.++|+|+.|+++|++++|..||...++.+.+.++.++.-
T Consensus       152 ~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~  231 (429)
T KOG0595|consen  152 PVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNE  231 (429)
T ss_pred             ceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccc
Confidence            67999999999999999999999999999999999999999999999999999999999999999999999988888754


Q ss_pred             c
Q psy8825          85 S   85 (92)
Q Consensus        85 ~   85 (92)
                      .
T Consensus       232 ~  232 (429)
T KOG0595|consen  232 I  232 (429)
T ss_pred             c
Confidence            3

>KOG0575|consensus

Probab=99.85  E-value=2.9e-21  Score=118.30  Aligned_cols=91  Identities=18%  Similarity=0.333  Sum_probs=84.4

Q ss_pred             CCCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      |+++-.+|+.|||++..+... .+..+.|||+-|.|||++...+++.-+|+||+||++|.++.|.+||...+-.+.+.+|
T Consensus       151 L~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~I  230 (592)
T KOG0575|consen  151 LNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKI  230 (592)
T ss_pred             ecCcCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHH
Confidence            456778999999999988754 8899999999999999999888999999999999999999999999999999999999


Q ss_pred             HhCCCcCCCCCC
Q psy8825          80 TDHSVSYPKMAV   91 (92)
Q Consensus        80 ~~~~~~~p~~~~   91 (92)
                      ....|.+|.+++
T Consensus       231 k~~~Y~~P~~ls  242 (592)
T KOG0575|consen  231 KLNEYSMPSHLS  242 (592)
T ss_pred             HhcCcccccccC
Confidence            999999999876

>KOG0578|consensus

Probab=99.85  E-value=2e-21  Score=118.19  Aligned_cols=83  Identities=18%  Similarity=0.371  Sum_probs=76.6

Q ss_pred             CCCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      |++++.+||.|||++..+.... ...+.+||+.|||||++....|+.+.|+||+|++.+||+.|++||..+++...+.+|
T Consensus       402 L~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLI  481 (550)
T KOG0578|consen  402 LTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI  481 (550)
T ss_pred             eccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHH
Confidence            6889999999999999998765 677889999999999999999999999999999999999999999999999998888


Q ss_pred             HhCC
Q psy8825          80 TDHS   83 (92)
Q Consensus        80 ~~~~   83 (92)
                      ....
T Consensus       482 a~ng  485 (550)
T KOG0578|consen  482 ATNG  485 (550)
T ss_pred             hhcC
Confidence            7754

>KOG0583|consensus

Probab=99.83  E-value=4.7e-20  Score=110.22  Aligned_cols=89  Identities=19%  Similarity=0.320  Sum_probs=81.4

Q ss_pred             CCC-CccccCCCcccccc-CCCCCCCCCCcCCcCccchhhccCC-C-CchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy8825           2 GES-QPFRERTLSHQDKI-RPGRGSNPRPSAYSILLFQIILYQP-Y-GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~-~~~~l~d~~~~~~~-~~~~~~~~~~g~~~~~~pe~~~~~~-~-~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~   77 (92)
                      +.. +.+|++|||++... .......+.|||+.|+|||++.+.. | +..+|+||+|++++.|+.|..||...+....+.
T Consensus       154 d~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~  233 (370)
T KOG0583|consen  154 DGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYR  233 (370)
T ss_pred             cCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHH
Confidence            455 88999999999888 4667889999999999999999877 8 588999999999999999999999999899999


Q ss_pred             HHHhCCCcCCCCC
Q psy8825          78 AITDHSVSYPKMA   90 (92)
Q Consensus        78 ~i~~~~~~~p~~~   90 (92)
                      +|.++.+.+|..+
T Consensus       234 ki~~~~~~~p~~~  246 (370)
T KOG0583|consen  234 KIRKGEFKIPSYL  246 (370)
T ss_pred             HHhcCCccCCCCc
Confidence            9999999999987

>KOG0605|consensus

Probab=99.81  E-value=8.4e-20  Score=110.83  Aligned_cols=66  Identities=32%  Similarity=0.709  Sum_probs=60.9

Q ss_pred             CCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CcCCCCCC
Q psy8825          26 PRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHS--VSYPKMAV   91 (92)
Q Consensus        26 ~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~--~~~p~~~~   91 (92)
                      +.+|||-|+|||++.+.+|+...|+||+||+++||+.|.+||.++++.+++.+|....  +++|....
T Consensus       347 StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~  414 (550)
T KOG0605|consen  347 STVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVD  414 (550)
T ss_pred             cccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCc
Confidence            3589999999999999999999999999999999999999999999999999999987  78887653

>KOG4717|consensus

Probab=99.81  E-value=4.4e-20  Score=112.93  Aligned_cols=89  Identities=25%  Similarity=0.494  Sum_probs=84.0

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +-|-+||+|||++.++.+++...+.||+..|-|||++.+..| .+.+|+|++|+++|-+..|++||+..+..+.+.+|..
T Consensus       154 KlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImD  233 (864)
T KOG4717|consen  154 KLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMD  233 (864)
T ss_pred             ecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhc
Confidence            567899999999999999999999999999999999999999 5789999999999999999999999998999999999


Q ss_pred             CCCcCCCCCC
Q psy8825          82 HSVSYPKMAV   91 (92)
Q Consensus        82 ~~~~~p~~~~   91 (92)
                      +.|..|.+++
T Consensus       234 CKYtvPshvS  243 (864)
T KOG4717|consen  234 CKYTVPSHVS  243 (864)
T ss_pred             ccccCchhhh
Confidence            9999999875

>KOG0597|consensus

Probab=99.80  E-value=4.6e-20  Score=113.44  Aligned_cols=91  Identities=22%  Similarity=0.412  Sum_probs=82.3

Q ss_pred             CCCCCccccCCCccccccCCCCC-CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRG-SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~-~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      |++.+.+|++|||+++.+..+.. ..+..||+.||+||.+.+..|+...|+|++||++||+..|++||....-.+...+|
T Consensus       133 l~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I  212 (808)
T KOG0597|consen  133 LEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSI  212 (808)
T ss_pred             ecCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHH
Confidence            46788999999999999987753 45568999999999999999999999999999999999999999998888899999


Q ss_pred             HhCCCcCCCCCC
Q psy8825          80 TDHSVSYPKMAV   91 (92)
Q Consensus        80 ~~~~~~~p~~~~   91 (92)
                      ..++.++|..++
T Consensus       213 ~~d~v~~p~~~S  224 (808)
T KOG0597|consen  213 LKDPVKPPSTAS  224 (808)
T ss_pred             hcCCCCCccccc
Confidence            999999998765

>KOG0033|consensus

Probab=99.80  E-value=2.9e-19  Score=100.99  Aligned_cols=86  Identities=29%  Similarity=0.529  Sum_probs=80.6

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH   82 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~   82 (92)
                      +.+++||.+||.+.-+..+.....++||+.||+||+++...|+...|+|++|++++-++.|.+||.+++..++++.|..+
T Consensus       148 ~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g  227 (355)
T KOG0033|consen  148 KGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAG  227 (355)
T ss_pred             CCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhcc
Confidence            56799999999998888777788899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcCCC
Q psy8825          83 SVSYPK   88 (92)
Q Consensus        83 ~~~~p~   88 (92)
                      .+.+|.
T Consensus       228 ~yd~~~  233 (355)
T KOG0033|consen  228 AYDYPS  233 (355)
T ss_pred             ccCCCC
Confidence            998876

>KOG0581|consensus

Probab=99.80  E-value=1e-19  Score=106.46  Aligned_cols=89  Identities=19%  Similarity=0.241  Sum_probs=78.5

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC-----CHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE-----DEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~-----~~~~~~   76 (92)
                      +..|.+|++|||.++.+... .+++++||..||+||.+.+..|+.+.|+||+|+.++|+..|..||...     +..+++
T Consensus       213 NskGeVKicDFGVS~~lvnS-~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll  291 (364)
T KOG0581|consen  213 NSKGEVKICDFGVSGILVNS-IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELL  291 (364)
T ss_pred             ccCCCEEeccccccHHhhhh-hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHH
Confidence            56789999999999888666 788999999999999999999999999999999999999999999874     678899


Q ss_pred             HHHHhC-CCcCCCC-CC
Q psy8825          77 AAITDH-SVSYPKM-AV   91 (92)
Q Consensus        77 ~~i~~~-~~~~p~~-~~   91 (92)
                      ..|..+ .+++|.. ++
T Consensus       292 ~~Iv~~ppP~lP~~~fS  308 (364)
T KOG0581|consen  292 CAIVDEPPPRLPEGEFS  308 (364)
T ss_pred             HHHhcCCCCCCCcccCC
Confidence            999985 5677775 44

>KOG0580|consensus

Probab=99.77  E-value=2.7e-18  Score=96.26  Aligned_cols=90  Identities=22%  Similarity=0.412  Sum_probs=82.7

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +|.++.+|++|||.+-.-. ..+..+.|||.-|.+||.+.+..++..+|+|++|++.++++.|.+||.+....+.+++|.
T Consensus       157 lg~~~~lkiAdfGwsV~~p-~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~  235 (281)
T KOG0580|consen  157 LGSAGELKIADFGWSVHAP-SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIR  235 (281)
T ss_pred             cCCCCCeeccCCCceeecC-CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHH
Confidence            5788999999999985543 566778999999999999999999999999999999999999999999999999999999


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      +..+.+|.+++
T Consensus       236 k~~~~~p~~is  246 (281)
T KOG0580|consen  236 KVDLKFPSTIS  246 (281)
T ss_pred             HccccCCcccC
Confidence            99999998876

>KOG0201|consensus

Probab=99.76  E-value=7.8e-20  Score=108.95  Aligned_cols=82  Identities=15%  Similarity=0.232  Sum_probs=71.4

Q ss_pred             CCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           3 ESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +++-+||.|||.+..+... .+..+++||+.|||||++++..|+.++|+||+|+..+++.+|.+|+....++.++..|.+
T Consensus       146 ~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk  225 (467)
T KOG0201|consen  146 ESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPK  225 (467)
T ss_pred             ccCcEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccC
Confidence            4578999999999887655 345899999999999999988999999999999999999999999999888777766666


Q ss_pred             CCC
Q psy8825          82 HSV   84 (92)
Q Consensus        82 ~~~   84 (92)
                      ..+
T Consensus       226 ~~P  228 (467)
T KOG0201|consen  226 SAP  228 (467)
T ss_pred             CCC
Confidence            544

>KOG0986|consensus

Probab=99.76  E-value=1.3e-18  Score=104.81  Aligned_cols=92  Identities=23%  Similarity=0.384  Sum_probs=82.3

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC----CHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE----DEEELF   76 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~----~~~~~~   76 (92)
                      |+..|.++++|+|++--+..++....++||..|||||++....|+.+.|+|++||++|+|+.|..||...    ...++-
T Consensus       320 LDd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvd  399 (591)
T KOG0986|consen  320 LDDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVD  399 (591)
T ss_pred             eccCCCeEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHH
Confidence            6789999999999999888888888999999999999999888999999999999999999999999754    345888


Q ss_pred             HHHHhCCCcCCCCCCC
Q psy8825          77 AAITDHSVSYPKMAVF   92 (92)
Q Consensus        77 ~~i~~~~~~~p~~~~~   92 (92)
                      .++.+....+|+.+++
T Consensus       400 rr~~~~~~ey~~kFS~  415 (591)
T KOG0986|consen  400 RRTLEDPEEYSDKFSE  415 (591)
T ss_pred             HHHhcchhhcccccCH
Confidence            8899988888877763

>KOG0593|consensus

Probab=99.73  E-value=2.1e-18  Score=99.67  Aligned_cols=86  Identities=19%  Similarity=0.322  Sum_probs=76.3

Q ss_pred             CCCCccccCCCccccccC-CCCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIR-PGRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~-~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      .+.+.+||.|||+++.+. ++..++-.+.|.||.+||.+.+ ..|+..+|+|++||++.|+++|.+.|.|....+++..|
T Consensus       135 t~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I  214 (396)
T KOG0593|consen  135 TQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLI  214 (396)
T ss_pred             ecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHH
Confidence            467899999999999998 6677777899999999999887 67999999999999999999999999999998998888


Q ss_pred             HhCCCcCC
Q psy8825          80 TDHSVSYP   87 (92)
Q Consensus        80 ~~~~~~~p   87 (92)
                      ......++
T Consensus       215 ~ktLG~L~  222 (396)
T KOG0593|consen  215 RKTLGNLI  222 (396)
T ss_pred             HHHHcccC
Confidence            87665544

>KOG0667|consensus

Probab=99.73  E-value=2.8e-18  Score=105.88  Aligned_cols=83  Identities=20%  Similarity=0.310  Sum_probs=72.7

Q ss_pred             CccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Q psy8825           5 QPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSV   84 (92)
Q Consensus         5 ~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~~   84 (92)
                      ..+|+.|||++...  .+...+.+-++.|.|||++.+..|+.+.|+||+||++.||.+|.+.|.|++..+++.+|.+...
T Consensus       328 ~~vKVIDFGSSc~~--~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG  405 (586)
T KOG0667|consen  328 SRIKVIDFGSSCFE--SQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLG  405 (586)
T ss_pred             CceeEEeccccccc--CCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhC
Confidence            47999999998554  3333377888999999999999999999999999999999999999999999999999999877


Q ss_pred             cCCCC
Q psy8825          85 SYPKM   89 (92)
Q Consensus        85 ~~p~~   89 (92)
                      ..|..
T Consensus       406 ~Pp~~  410 (586)
T KOG0667|consen  406 LPPPK  410 (586)
T ss_pred             CCCHH
Confidence            65543

>KOG0983|consensus

Probab=99.70  E-value=2.3e-17  Score=94.56  Aligned_cols=89  Identities=16%  Similarity=0.293  Sum_probs=76.0

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhc---cCCCCchhhHHhHHHHHHHHHhCCCCCCCC-CHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIIL---YQPYGKSVDWWAYGVLLYEMLVGQPPFDGE-DEEELF   76 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~---~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~-~~~~~~   76 (92)
                      |+++|.+||.|||.+..+..+.......|++.||+||.+-   ...|+.++|+||+|+.++|+.+|+.||.+. ..++++
T Consensus       225 lDe~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~l  304 (391)
T KOG0983|consen  225 LDERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVL  304 (391)
T ss_pred             EccCCCEEeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHH
Confidence            5788999999999999998887777789999999999974   346899999999999999999999999984 568999


Q ss_pred             HHHHhCCC-cCCCC
Q psy8825          77 AAITDHSV-SYPKM   89 (92)
Q Consensus        77 ~~i~~~~~-~~p~~   89 (92)
                      .+|....+ .+|.+
T Consensus       305 tkvln~ePP~L~~~  318 (391)
T KOG0983|consen  305 TKVLNEEPPLLPGH  318 (391)
T ss_pred             HHHHhcCCCCCCcc
Confidence            99888654 44444

>KOG0615|consensus

Probab=99.70  E-value=6.6e-19  Score=104.66  Aligned_cols=83  Identities=18%  Similarity=0.258  Sum_probs=69.4

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCC---CchhhHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHH
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPY---GKSVDWWAYGVLLYEMLVGQPPFDGEDEE-ELFAAI   79 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~---~~~~~~ws~g~~~~~~~~g~~p~~~~~~~-~~~~~i   79 (92)
                      +-.+|++|||+++......-..++|||+.|.|||++...++   ..++|+||+||+++-+++|.+||.+.... .+...|
T Consensus       315 ~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI  394 (475)
T KOG0615|consen  315 DCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQI  394 (475)
T ss_pred             ceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHH
Confidence            45789999999999887788899999999999999976543   45789999999999999999999876443 367778


Q ss_pred             HhCCCcC
Q psy8825          80 TDHSVSY   86 (92)
Q Consensus        80 ~~~~~~~   86 (92)
                      .++.|.+
T Consensus       395 ~~G~y~f  401 (475)
T KOG0615|consen  395 LKGRYAF  401 (475)
T ss_pred             hcCcccc
Confidence            8887765

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.69  E-value=1.4e-16  Score=93.79  Aligned_cols=90  Identities=44%  Similarity=0.776  Sum_probs=76.0

Q ss_pred             CCCCccccCCCccccccCC-CCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRP-GRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      ++++.+||.|||.+..... .......+|++.|++||++.+..++.+.|+|++|++++++++|..||.+.+..+.+..+.
T Consensus       135 ~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~  214 (323)
T cd05616         135 DSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM  214 (323)
T ss_pred             CCCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            5678899999998865432 334456789999999999988888999999999999999999999999998888888888


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      ...+.+|..++
T Consensus       215 ~~~~~~p~~~s  225 (323)
T cd05616         215 EHNVAYPKSMS  225 (323)
T ss_pred             hCCCCCCCcCC
Confidence            88888777654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0600|consensus

Probab=99.69  E-value=3.6e-17  Score=99.29  Aligned_cols=82  Identities=21%  Similarity=0.358  Sum_probs=72.5

Q ss_pred             CCCCCccccCCCccccccCCC--CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPG--RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFA   77 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~--~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~   77 (92)
                      ++..|.+|++|||+++.....  ...++.+-|.+|.+||.+.+. .|+...|+||+||++.|++.|.+.|+|.+..+++.
T Consensus       251 idn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~  330 (560)
T KOG0600|consen  251 IDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLH  330 (560)
T ss_pred             EcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHH
Confidence            356789999999999966554  467888999999999998875 68999999999999999999999999999999999


Q ss_pred             HHHhC
Q psy8825          78 AITDH   82 (92)
Q Consensus        78 ~i~~~   82 (92)
                      +|.+.
T Consensus       331 kIfkl  335 (560)
T KOG0600|consen  331 KIFKL  335 (560)
T ss_pred             HHHHH
Confidence            98874

>KOG0589|consensus

Probab=99.69  E-value=5.4e-17  Score=97.71  Aligned_cols=89  Identities=20%  Similarity=0.340  Sum_probs=80.6

Q ss_pred             CCCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      |.+++.+||.|||.++.+.... ...+.+||+.|++||.+.+..|+.+.|+|++||.+++|..-+.+|.+.+......+|
T Consensus       139 ltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki  218 (426)
T KOG0589|consen  139 LTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKI  218 (426)
T ss_pred             ccccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHH
Confidence            4678889999999999998876 788899999999999999999999999999999999999999999999999999999


Q ss_pred             HhCC-CcCCCC
Q psy8825          80 TDHS-VSYPKM   89 (92)
Q Consensus        80 ~~~~-~~~p~~   89 (92)
                      .+.. .++|..
T Consensus       219 ~~~~~~Plp~~  229 (426)
T KOG0589|consen  219 NRGLYSPLPSM  229 (426)
T ss_pred             hhccCCCCCcc
Confidence            9887 455544

>KOG0695|consensus

Probab=99.68  E-value=1.3e-16  Score=94.01  Aligned_cols=91  Identities=29%  Similarity=0.584  Sum_probs=76.1

Q ss_pred             CCCCCccccCCCccccc-cCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCC--CC-----C-
Q psy8825           1 MGESQPFRERTLSHQDK-IRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFD--GE-----D-   71 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~-~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~--~~-----~-   71 (92)
                      +++.+.+||+|+|.++- +.++....++|||+-|.|||++++..|+.+.|+|.+|+++++|..|..||.  |.     + 
T Consensus       384 ldaeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~nt  463 (593)
T KOG0695|consen  384 LDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNT  463 (593)
T ss_pred             EccCCceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccch
Confidence            46789999999998753 456678889999999999999999999999999999999999999999994  21     2 


Q ss_pred             HHHHHHHHHhCCCcCCCCCC
Q psy8825          72 EEELFAAITDHSVSYPKMAV   91 (92)
Q Consensus        72 ~~~~~~~i~~~~~~~p~~~~   91 (92)
                      ..-+++-|.+.+.++|+.++
T Consensus       464 edylfqvilekqiriprsls  483 (593)
T KOG0695|consen  464 EDYLFQVILEKQIRIPRSLS  483 (593)
T ss_pred             hHHHHHHHhhhcccccceee
Confidence            23346667788899998765

>KOG0611|consensus

Probab=99.68  E-value=6.3e-17  Score=97.11  Aligned_cols=88  Identities=24%  Similarity=0.398  Sum_probs=81.0

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      |+...-+|++|||++.......-.+++||++.|.+||++++..| +..+|.|++|+++|.+..|..||.|.++......|
T Consensus       186 LD~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQI  265 (668)
T KOG0611|consen  186 LDQNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQI  265 (668)
T ss_pred             ecCCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHh
Confidence            46778899999999988877888999999999999999999998 78899999999999999999999999999999999


Q ss_pred             HhCCCcCCC
Q psy8825          80 TDHSVSYPK   88 (92)
Q Consensus        80 ~~~~~~~p~   88 (92)
                      .++.|.-|.
T Consensus       266 s~GaYrEP~  274 (668)
T KOG0611|consen  266 SRGAYREPE  274 (668)
T ss_pred             hcccccCCC
Confidence            999887775

>KOG0658|consensus

Probab=99.68  E-value=4.2e-17  Score=95.55  Aligned_cols=82  Identities=18%  Similarity=0.288  Sum_probs=74.2

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH   82 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~   82 (92)
                      .+.+|++|||+++.+..+....+..+|+.|.|||.+.+. .|+.+.|+||.||++-|++.|++-|.|++..+++..|.+.
T Consensus       162 tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~  241 (364)
T KOG0658|consen  162 TGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKV  241 (364)
T ss_pred             CCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHH
Confidence            478999999999999998888888899999999998664 6899999999999999999999999999999999888886


Q ss_pred             CCc
Q psy8825          83 SVS   85 (92)
Q Consensus        83 ~~~   85 (92)
                      ...
T Consensus       242 lG~  244 (364)
T KOG0658|consen  242 LGT  244 (364)
T ss_pred             hCC
Confidence            554

>KOG0599|consensus

Probab=99.67  E-value=5.4e-17  Score=93.18  Aligned_cols=87  Identities=22%  Similarity=0.398  Sum_probs=75.7

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccC------CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQ------PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE   74 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~------~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~   74 (92)
                      |+....+|++|||++..+.++.+....|||+.|+|||.+++.      +|+...|+|++|++++.++.|.+||.-....-
T Consensus       156 lddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQml  235 (411)
T KOG0599|consen  156 LDDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQML  235 (411)
T ss_pred             eccccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHH
Confidence            355678999999999999999999999999999999998753      57778999999999999999999998777777


Q ss_pred             HHHHHHhCCCcCC
Q psy8825          75 LFAAITDHSVSYP   87 (92)
Q Consensus        75 ~~~~i~~~~~~~p   87 (92)
                      .+.+|.++.+.|-
T Consensus       236 MLR~ImeGkyqF~  248 (411)
T KOG0599|consen  236 MLRMIMEGKYQFR  248 (411)
T ss_pred             HHHHHHhcccccC
Confidence            7888888887653

>KOG0032|consensus

Probab=99.67  E-value=1.8e-16  Score=95.24  Aligned_cols=85  Identities=31%  Similarity=0.514  Sum_probs=78.1

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHS   83 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~   83 (92)
                      ++.+|++|||++............+||+.|+|||++....|+...|+|++|+++|.++.|.+||.+.........|..+.
T Consensus       175 ~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~  254 (382)
T KOG0032|consen  175 SGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGD  254 (382)
T ss_pred             CCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCC
Confidence            35899999999988877778888999999999999998999999999999999999999999999999999999999998


Q ss_pred             CcCCC
Q psy8825          84 VSYPK   88 (92)
Q Consensus        84 ~~~p~   88 (92)
                      +.++.
T Consensus       255 ~~f~~  259 (382)
T KOG0032|consen  255 FDFTS  259 (382)
T ss_pred             CCCCC
Confidence            87654

>KOG0604|consensus

Probab=99.67  E-value=8.9e-17  Score=93.00  Aligned_cols=87  Identities=18%  Similarity=0.350  Sum_probs=76.6

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCH----HHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE----EELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~----~~~~~   77 (92)
                      +.+..+||.|||+++.........+.|-|+.|.+||++...+|+...|+||+|+++|-++.|.+||.+...    ...-.
T Consensus       198 ~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~  277 (400)
T KOG0604|consen  198 SPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKR  277 (400)
T ss_pred             CCCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHh
Confidence            34678999999999888777788899999999999999888999999999999999999999999987643    34567


Q ss_pred             HHHhCCCcCCC
Q psy8825          78 AITDHSVSYPK   88 (92)
Q Consensus        78 ~i~~~~~~~p~   88 (92)
                      +|..+.|.||.
T Consensus       278 rI~~gqy~FP~  288 (400)
T KOG0604|consen  278 RIRTGQYEFPE  288 (400)
T ss_pred             HhhccCccCCC
Confidence            88899999886

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.67  E-value=4.7e-16  Score=91.56  Aligned_cols=90  Identities=31%  Similarity=0.602  Sum_probs=75.6

Q ss_pred             CCCCccccCCCccccccCC-CCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRP-GRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      ++++.+||.|||.+..... .....+.+|++.|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+.+..+.
T Consensus       135 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~  214 (324)
T cd05589         135 DTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIV  214 (324)
T ss_pred             CCCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            5678899999998765432 334456789999999999988888889999999999999999999999998888888888


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      ...+.+|..++
T Consensus       215 ~~~~~~p~~~~  225 (324)
T cd05589         215 NDEVRYPRFLS  225 (324)
T ss_pred             hCCCCCCCCCC
Confidence            88887777654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0582|consensus

Probab=99.67  E-value=1.6e-16  Score=95.49  Aligned_cols=88  Identities=10%  Similarity=0.185  Sum_probs=74.0

Q ss_pred             CCCCCccccCCCccccccCCC-C----CCCCCCcCCcCccchhhcc--CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPG-R----GSNPRPSAYSILLFQIILY--QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEE   73 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~-~----~~~~~~g~~~~~~pe~~~~--~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~   73 (92)
                      ++.+|.+||.|||++..+..+ .    +.++++||++||+||++..  .+|+.++||||+|+...|+.+|..||....+.
T Consensus       159 i~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm  238 (516)
T KOG0582|consen  159 IDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM  238 (516)
T ss_pred             EcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH
Confidence            478999999999987666433 2    2367799999999999643  57999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCcCCC
Q psy8825          74 ELFAAITDHSVSYPK   88 (92)
Q Consensus        74 ~~~~~i~~~~~~~p~   88 (92)
                      ..+.+-+++.++.|.
T Consensus       239 kvLl~tLqn~pp~~~  253 (516)
T KOG0582|consen  239 KVLLLTLQNDPPTLL  253 (516)
T ss_pred             HHHHHHhcCCCCCcc
Confidence            988888888877554

>KOG0574|consensus

Probab=99.67  E-value=7.3e-18  Score=97.95  Aligned_cols=83  Identities=14%  Similarity=0.211  Sum_probs=73.4

Q ss_pred             CCCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      |+.+|..||+|||.+..+... ...+++.||+.||+||++..-+|+..+|+||+|+...+|..|.+||....+.+.+.+|
T Consensus       162 LNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMI  241 (502)
T KOG0574|consen  162 LNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMI  241 (502)
T ss_pred             EcccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEec
Confidence            567899999999999888655 4677899999999999999999999999999999999999999999998888887776


Q ss_pred             HhCC
Q psy8825          80 TDHS   83 (92)
Q Consensus        80 ~~~~   83 (92)
                      .-.+
T Consensus       242 PT~P  245 (502)
T KOG0574|consen  242 PTKP  245 (502)
T ss_pred             cCCC
Confidence            6544

>KOG0594|consensus

Probab=99.66  E-value=1.8e-16  Score=92.38  Aligned_cols=83  Identities=20%  Similarity=0.286  Sum_probs=73.7

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      ++++.+|++|||.++..... ..+.+.++|.+|.+||++.+. .|+...|+|++||++.||+++...|.+....+++.+|
T Consensus       154 ~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~I  233 (323)
T KOG0594|consen  154 SSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRI  233 (323)
T ss_pred             CCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHH
Confidence            56899999999999988744 557888999999999999876 6899999999999999999999999999999999888


Q ss_pred             HhCCC
Q psy8825          80 TDHSV   84 (92)
Q Consensus        80 ~~~~~   84 (92)
                      .+...
T Consensus       234 f~~lG  238 (323)
T KOG0594|consen  234 FRLLG  238 (323)
T ss_pred             HHHcC
Confidence            87544

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.66  E-value=6.6e-16  Score=90.76  Aligned_cols=90  Identities=33%  Similarity=0.621  Sum_probs=74.7

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+...... ......+|+..|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+.+..+.
T Consensus       130 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~  209 (316)
T cd05592         130 DKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSIL  209 (316)
T ss_pred             CCCCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            56778999999998654332 34455689999999999988888889999999999999999999999988888888888


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      ...+.+|..++
T Consensus       210 ~~~~~~~~~~~  220 (316)
T cd05592         210 NDRPHFPRWIS  220 (316)
T ss_pred             cCCCCCCCCCC
Confidence            77777776553

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.66  E-value=1.5e-16  Score=93.70  Aligned_cols=90  Identities=24%  Similarity=0.492  Sum_probs=75.2

Q ss_pred             CCCCccccCCCccccccC-CCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIR-PGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~-~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+|+.|||.+.... ........+|++.|++||++.+..++.+.|+|++|++++++++|..||.+.+.......+.
T Consensus       129 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~  208 (323)
T cd05571         129 DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL  208 (323)
T ss_pred             CCCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHH
Confidence            467789999999886532 2334455789999999999988888999999999999999999999999988888888888


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      .....+|..++
T Consensus       209 ~~~~~~p~~~~  219 (323)
T cd05571         209 MEEIRFPRTLS  219 (323)
T ss_pred             cCCCCCCCCCC
Confidence            88888887654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.66  E-value=5.8e-16  Score=92.43  Aligned_cols=87  Identities=21%  Similarity=0.495  Sum_probs=69.5

Q ss_pred             CCCCccccCCCccccccCCCC------------------------------------CCCCCCcCCcCccchhhccCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGR------------------------------------GSNPRPSAYSILLFQIILYQPYG   45 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~------------------------------------~~~~~~g~~~~~~pe~~~~~~~~   45 (92)
                      +.++.+||.|||.+..+....                                    ...+.+||+.|+|||++.+..++
T Consensus       135 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~  214 (363)
T cd05628         135 DSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYN  214 (363)
T ss_pred             CCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCC
Confidence            567889999999876543211                                    11346899999999999888889


Q ss_pred             chhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCcCCC
Q psy8825          46 KSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH--SVSYPK   88 (92)
Q Consensus        46 ~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~--~~~~p~   88 (92)
                      .+.|+|++|++++++++|..||.+.+..+.+.+|...  ...+|.
T Consensus       215 ~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~  259 (363)
T cd05628         215 KLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPP  259 (363)
T ss_pred             CchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCC
Confidence            9999999999999999999999998888888888763  344554

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG4721|consensus

Probab=99.66  E-value=1e-17  Score=103.63  Aligned_cols=82  Identities=18%  Similarity=0.398  Sum_probs=70.9

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH   82 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~   82 (92)
                      .+..+|++|||-+.-+....+..+|+||..|||||+++....+.++|+|++|+++|||+++..||...+...++.-+-.+
T Consensus       247 ~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsN  326 (904)
T KOG4721|consen  247 YDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSN  326 (904)
T ss_pred             ccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCC
Confidence            45689999999987777667788899999999999999999999999999999999999999999987776666655555


Q ss_pred             CC
Q psy8825          83 SV   84 (92)
Q Consensus        83 ~~   84 (92)
                      .+
T Consensus       327 sL  328 (904)
T KOG4721|consen  327 SL  328 (904)
T ss_pred             cc
Confidence            43

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.66  E-value=7.7e-16  Score=90.72  Aligned_cols=90  Identities=48%  Similarity=0.811  Sum_probs=75.1

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      ++++.+||.|||.+...... ......+|+..|++||++.+..++.+.|+|++|++++++++|..||.+.+.......+.
T Consensus       135 ~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~  214 (323)
T cd05615         135 DSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM  214 (323)
T ss_pred             CCCCCEEEeccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            56788999999988654332 33445679999999999988888889999999999999999999999988888888888


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      .....+|..++
T Consensus       215 ~~~~~~p~~~~  225 (323)
T cd05615         215 EHNVSYPKSLS  225 (323)
T ss_pred             hCCCCCCccCC
Confidence            88887776654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.66  E-value=5.9e-16  Score=91.15  Aligned_cols=90  Identities=48%  Similarity=0.837  Sum_probs=75.1

Q ss_pred             CCCCccccCCCccccccC-CCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIR-PGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~-~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+.... ........+|+..|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+.+..+.
T Consensus       135 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~  214 (324)
T cd05587         135 DAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIM  214 (324)
T ss_pred             cCCCCEEEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            567789999999876432 2233445689999999999988888889999999999999999999999998888888888


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      ...+.+|..++
T Consensus       215 ~~~~~~~~~~~  225 (324)
T cd05587         215 EHNVSYPKSLS  225 (324)
T ss_pred             cCCCCCCCCCC
Confidence            88888777654

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0612|consensus

Probab=99.66  E-value=1.3e-16  Score=103.85  Aligned_cols=88  Identities=26%  Similarity=0.538  Sum_probs=76.8

Q ss_pred             CCCCCccccCCCccccccCCC--CCCCCCCcCCcCccchhhcc-----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPG--RGSNPRPSAYSILLFQIILY-----QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEE   73 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~--~~~~~~~g~~~~~~pe~~~~-----~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~   73 (92)
                      |++.|++||+|||.+-++..+  ....+-+|||-|.+||++..     ..|+...|+||+|+++|||+.|..||..+...
T Consensus       208 ld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslv  287 (1317)
T KOG0612|consen  208 LDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLV  287 (1317)
T ss_pred             ecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHH
Confidence            578999999999999888744  35566799999999999853     45889999999999999999999999999999


Q ss_pred             HHHHHHHhC--CCcCCC
Q psy8825          74 ELFAAITDH--SVSYPK   88 (92)
Q Consensus        74 ~~~~~i~~~--~~~~p~   88 (92)
                      +.+-+|..-  .+.||.
T Consensus       288 eTY~KIm~hk~~l~FP~  304 (1317)
T KOG0612|consen  288 ETYGKIMNHKESLSFPD  304 (1317)
T ss_pred             HHHHHHhchhhhcCCCc
Confidence            999999886  688883

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.65  E-value=7.5e-16  Score=90.65  Aligned_cols=90  Identities=33%  Similarity=0.572  Sum_probs=75.2

Q ss_pred             CCCCccccCCCccccccCC-CCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRP-GRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+..... .......+|++.|++||.+....++.+.|+|++|++++++++|..||.+.+..+.+..+.
T Consensus       130 ~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~  209 (320)
T cd05590         130 DHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL  209 (320)
T ss_pred             CCCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHh
Confidence            5678899999998765432 234455689999999999988888889999999999999999999999999888888888


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      ...+.+|..++
T Consensus       210 ~~~~~~~~~~~  220 (320)
T cd05590         210 NDEVVYPTWLS  220 (320)
T ss_pred             cCCCCCCCCCC
Confidence            88887776554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.65  E-value=3.2e-16  Score=92.99  Aligned_cols=88  Identities=22%  Similarity=0.468  Sum_probs=75.1

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+||.|||.+.....  ...+.+||+.|+|||++.+..++.+.|+|++|++++++++|..||.+.+....+..+..
T Consensus       165 ~~~~~ikL~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~  242 (340)
T PTZ00426        165 DKDGFIKMTDFGFAKVVDT--RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILE  242 (340)
T ss_pred             CCCCCEEEecCCCCeecCC--CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhc
Confidence            5678899999999866532  23456899999999999888888899999999999999999999999988888889988


Q ss_pred             CCCcCCCCCC
Q psy8825          82 HSVSYPKMAV   91 (92)
Q Consensus        82 ~~~~~p~~~~   91 (92)
                      +...+|..++
T Consensus       243 ~~~~~p~~~~  252 (340)
T PTZ00426        243 GIIYFPKFLD  252 (340)
T ss_pred             CCCCCCCCCC
Confidence            8888887654

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=7.3e-16  Score=89.58  Aligned_cols=88  Identities=26%  Similarity=0.493  Sum_probs=74.8

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+|+.|||.+.....  .....+|++.|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+....+..
T Consensus       135 ~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~  212 (291)
T cd05612         135 DKEGHIKLTDFGFAKKLRD--RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILA  212 (291)
T ss_pred             CCCCCEEEEecCcchhccC--CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            4677899999999866533  23346799999999999888888999999999999999999999999988888888988


Q ss_pred             CCCcCCCCCC
Q psy8825          82 HSVSYPKMAV   91 (92)
Q Consensus        82 ~~~~~p~~~~   91 (92)
                      ....+|..++
T Consensus       213 ~~~~~~~~~~  222 (291)
T cd05612         213 GKLEFPRHLD  222 (291)
T ss_pred             CCcCCCccCC
Confidence            8888887654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.65  E-value=8.3e-16  Score=90.58  Aligned_cols=90  Identities=24%  Similarity=0.493  Sum_probs=74.4

Q ss_pred             CCCCccccCCCccccccCC-CCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRP-GRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+..... .......+|+..|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+....+.
T Consensus       129 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~  208 (323)
T cd05595         129 DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL  208 (323)
T ss_pred             cCCCCEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHh
Confidence            4677899999998765322 233455789999999999988888899999999999999999999999988888888888


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      .....+|..++
T Consensus       209 ~~~~~~p~~~~  219 (323)
T cd05595         209 MEEIRFPRTLS  219 (323)
T ss_pred             cCCCCCCCCCC
Confidence            77777777654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.65  E-value=4.6e-16  Score=91.85  Aligned_cols=90  Identities=23%  Similarity=0.475  Sum_probs=74.5

Q ss_pred             CCCCccccCCCccccccCC-CCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRP-GRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+..... .......+|++.|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+....+.
T Consensus       129 ~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~  208 (328)
T cd05593         129 DKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL  208 (328)
T ss_pred             CCCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhc
Confidence            4677899999998765432 233455789999999999988888899999999999999999999999888888888888


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      .....+|..++
T Consensus       209 ~~~~~~p~~~~  219 (328)
T cd05593         209 MEDIKFPRTLS  219 (328)
T ss_pred             cCCccCCCCCC
Confidence            77777777654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=5.6e-16  Score=90.84  Aligned_cols=90  Identities=28%  Similarity=0.444  Sum_probs=75.3

Q ss_pred             CCCCccccCCCccccccCC-CCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRP-GRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+|+.|||.+..... .......+|++.|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+....+.
T Consensus       127 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~  206 (312)
T cd05585         127 DYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKIL  206 (312)
T ss_pred             CCCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHH
Confidence            4677899999998865433 233445689999999999988888899999999999999999999999988888888888


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      .....+|..++
T Consensus       207 ~~~~~~~~~~~  217 (312)
T cd05585         207 QEPLRFPDGFD  217 (312)
T ss_pred             cCCCCCCCcCC
Confidence            88888777654

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.64  E-value=6.2e-16  Score=90.97  Aligned_cols=90  Identities=31%  Similarity=0.562  Sum_probs=75.3

Q ss_pred             CCCCccccCCCccccccCC-CCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRP-GRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      ++++.+||.|||.+..... .......+|+..|++||++....++.+.|+|++|++++++++|..||.+.+..+.+..+.
T Consensus       130 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~  209 (321)
T cd05591         130 DAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESIL  209 (321)
T ss_pred             CCCCCEEEeecccceecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence            5678899999998765432 333455689999999999988888899999999999999999999999999888888888


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      .....+|..++
T Consensus       210 ~~~~~~p~~~~  220 (321)
T cd05591         210 HDDVLYPVWLS  220 (321)
T ss_pred             cCCCCCCCCCC
Confidence            88877776543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.64  E-value=4.7e-16  Score=91.83  Aligned_cols=88  Identities=24%  Similarity=0.452  Sum_probs=75.1

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+||.|||.+.....  ...+.+|++.|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+.+..+.+
T Consensus       152 ~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~  229 (329)
T PTZ00263        152 DNKGHVKVTDFGFAKKVPD--RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILA  229 (329)
T ss_pred             CCCCCEEEeeccCceEcCC--CcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhc
Confidence            5678899999999866533  23356899999999999888888899999999999999999999999888888889988


Q ss_pred             CCCcCCCCCC
Q psy8825          82 HSVSYPKMAV   91 (92)
Q Consensus        82 ~~~~~p~~~~   91 (92)
                      +.+.+|..++
T Consensus       230 ~~~~~p~~~~  239 (329)
T PTZ00263        230 GRLKFPNWFD  239 (329)
T ss_pred             CCcCCCCCCC
Confidence            8888887654

>KOG0192|consensus

Probab=99.64  E-value=1.2e-15  Score=91.13  Aligned_cols=82  Identities=15%  Similarity=0.318  Sum_probs=68.2

Q ss_pred             CCCC-ccccCCCccccccCCC-CCCCCCCcCCcCccchhhc--cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy8825           2 GESQ-PFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIIL--YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~-~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~--~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~   77 (92)
                      ..+. .+|++|||.++..... .......||..|||||++.  ...|+.+.|+||+|+++||++++..||.+.....+..
T Consensus       177 ~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~  256 (362)
T KOG0192|consen  177 DLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVAS  256 (362)
T ss_pred             cCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence            3454 8999999999777654 4444579999999999999  5689999999999999999999999999988877766


Q ss_pred             HHHhCC
Q psy8825          78 AITDHS   83 (92)
Q Consensus        78 ~i~~~~   83 (92)
                      .+....
T Consensus       257 ~v~~~~  262 (362)
T KOG0192|consen  257 AVVVGG  262 (362)
T ss_pred             HHHhcC
Confidence            666443

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.64  E-value=9.3e-16  Score=90.33  Aligned_cols=90  Identities=22%  Similarity=0.458  Sum_probs=74.7

Q ss_pred             CCCCccccCCCccccccCC-CCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRP-GRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+..... .......+|+..|++||.+....++.+.|+|++|++++++++|..||.+.+....+..+.
T Consensus       134 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~  213 (323)
T cd05584         134 DAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKIL  213 (323)
T ss_pred             CCCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence            5678899999998765433 233445689999999999988778889999999999999999999999988888888888


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      .....+|..++
T Consensus       214 ~~~~~~~~~~~  224 (323)
T cd05584         214 KGKLNLPPYLT  224 (323)
T ss_pred             cCCCCCCCCCC
Confidence            88887777654

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0610|consensus

Probab=99.64  E-value=7.9e-16  Score=91.76  Aligned_cols=70  Identities=33%  Similarity=0.688  Sum_probs=65.6

Q ss_pred             CCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcCCCC
Q psy8825          20 PGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPKM   89 (92)
Q Consensus        20 ~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~~~~p~~   89 (92)
                      .+.+..+++||-.|+|||++.+.+.+..+|+|.+|+++|||+.|..||.|.+..+.+..|+...+.||..
T Consensus       288 ~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~  357 (459)
T KOG0610|consen  288 TGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEE  357 (459)
T ss_pred             CCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCC
Confidence            3456778999999999999999999999999999999999999999999999999999999999999975

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.64  E-value=9.8e-16  Score=90.26  Aligned_cols=89  Identities=22%  Similarity=0.433  Sum_probs=73.0

Q ss_pred             CCCCccccCCCccccccCC-CCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRP-GRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+..... .......+|++.|++||++.+..++.+.|+|++|++++++++|..||.+.+..+.+..+.
T Consensus       130 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  209 (325)
T cd05602         130 DSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL  209 (325)
T ss_pred             CCCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence            4677899999998865432 334455789999999999988888889999999999999999999999988888888887


Q ss_pred             hCCCcCCCCC
Q psy8825          81 DHSVSYPKMA   90 (92)
Q Consensus        81 ~~~~~~p~~~   90 (92)
                      .....++..+
T Consensus       210 ~~~~~~~~~~  219 (325)
T cd05602         210 NKPLQLKPNI  219 (325)
T ss_pred             hCCcCCCCCC
Confidence            7766665544

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0197|consensus

Probab=99.63  E-value=5.3e-16  Score=94.11  Aligned_cols=90  Identities=18%  Similarity=0.350  Sum_probs=72.0

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCc---CCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPS---AYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELF   76 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g---~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~   76 (92)
                      ++++..+|++|||+++....+ .+....|   -..|.|||.+....|+.+.|+||+|+++||+++ |+.||.+.+..+++
T Consensus       336 V~~~~~vKIsDFGLAr~~~d~-~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~  414 (468)
T KOG0197|consen  336 VDEDLVVKISDFGLARLIGDD-EYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVL  414 (468)
T ss_pred             eccCceEEEcccccccccCCC-ceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHH
Confidence            467889999999999843322 2222222   248999999999999999999999999999998 99999999999999


Q ss_pred             HHHHhCC-CcCCCCCC
Q psy8825          77 AAITDHS-VSYPKMAV   91 (92)
Q Consensus        77 ~~i~~~~-~~~p~~~~   91 (92)
                      ..+.++. .+-|...|
T Consensus       415 ~~le~GyRlp~P~~CP  430 (468)
T KOG0197|consen  415 ELLERGYRLPRPEGCP  430 (468)
T ss_pred             HHHhccCcCCCCCCCC
Confidence            9998874 45565544

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.63  E-value=1.1e-15  Score=89.91  Aligned_cols=89  Identities=24%  Similarity=0.466  Sum_probs=73.0

Q ss_pred             CCCCccccCCCccccccC-CCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIR-PGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~-~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+.... ........+|++.|++||.+....++.+.|+|++|++++++++|..||.+.+.......+.
T Consensus       130 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  209 (321)
T cd05603         130 DSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNIL  209 (321)
T ss_pred             CCCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHh
Confidence            567889999999876532 2333455689999999999988888889999999999999999999999988888888888


Q ss_pred             hCCCcCCCCC
Q psy8825          81 DHSVSYPKMA   90 (92)
Q Consensus        81 ~~~~~~p~~~   90 (92)
                      .....+|...
T Consensus       210 ~~~~~~~~~~  219 (321)
T cd05603         210 HKPLQLPGGK  219 (321)
T ss_pred             cCCCCCCCCC
Confidence            7777666543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.63  E-value=2.3e-15  Score=88.46  Aligned_cols=90  Identities=31%  Similarity=0.554  Sum_probs=73.7

Q ss_pred             CCCCccccCCCccccccCC-CCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRP-GRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+++.|||.+..... .......+|+..|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+....+.
T Consensus       130 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~  209 (316)
T cd05620         130 DRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIR  209 (316)
T ss_pred             CCCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            5677899999998764322 233455789999999999988888999999999999999999999999988888888877


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      ...+.+|..++
T Consensus       210 ~~~~~~~~~~~  220 (316)
T cd05620         210 VDTPHYPRWIT  220 (316)
T ss_pred             hCCCCCCCCCC
Confidence            77777776543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.63  E-value=2.7e-15  Score=88.20  Aligned_cols=90  Identities=38%  Similarity=0.700  Sum_probs=74.4

Q ss_pred             CCCCccccCCCccccccC-CCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIR-PGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~-~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      ++++.+||.|||.+.... ........+|+..|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+....+.
T Consensus       130 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~  209 (318)
T cd05570         130 DSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSIL  209 (318)
T ss_pred             CCCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHH
Confidence            567789999999876532 2233445689999999999988888899999999999999999999999988888888888


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      .....+|..++
T Consensus       210 ~~~~~~~~~~~  220 (318)
T cd05570         210 EDEVRYPRWLS  220 (318)
T ss_pred             cCCCCCCCcCC
Confidence            88777776554

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0585|consensus

Probab=99.62  E-value=4.3e-16  Score=94.39  Aligned_cols=89  Identities=24%  Similarity=0.415  Sum_probs=74.6

Q ss_pred             CCCCCccccCCCccccccCCC------CCCCCCCcCCcCccchhhccC---CC-CchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           1 MGESQPFRERTLSHQDKIRPG------RGSNPRPSAYSILLFQIILYQ---PY-GKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~------~~~~~~~g~~~~~~pe~~~~~---~~-~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      ++.++.+|++|||.+.....+      ......+||+.++|||.....   .+ +.+.|+|++|+.+|.++.|+.||.++
T Consensus       243 l~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~  322 (576)
T KOG0585|consen  243 LSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD  322 (576)
T ss_pred             EcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc
Confidence            478899999999998655222      223446899999999997652   23 67899999999999999999999999


Q ss_pred             CHHHHHHHHHhCCCcCCCC
Q psy8825          71 DEEELFAAITDHSVSYPKM   89 (92)
Q Consensus        71 ~~~~~~~~i~~~~~~~p~~   89 (92)
                      ...+++.+|......+|.+
T Consensus       323 ~~~~l~~KIvn~pL~fP~~  341 (576)
T KOG0585|consen  323 FELELFDKIVNDPLEFPEN  341 (576)
T ss_pred             hHHHHHHHHhcCcccCCCc
Confidence            9999999999999999875

>KOG0671|consensus

Probab=99.62  E-value=2.6e-17  Score=97.03  Aligned_cols=86  Identities=16%  Similarity=0.209  Sum_probs=76.1

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH   82 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~   82 (92)
                      ++..+++.|||.+......+  .+.+.|.-|.|||++.+.+++...|+||.||+++|+.+|...|++.+..+++.++.+.
T Consensus       247 ks~~I~vIDFGsAtf~~e~h--s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerI  324 (415)
T KOG0671|consen  247 KSTAIKVIDFGSATFDHEHH--STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERI  324 (415)
T ss_pred             CCcceEEEecCCcceeccCc--ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHh
Confidence            35578999999996654443  6778999999999999999999999999999999999999999999888989999999


Q ss_pred             CCcCCCCC
Q psy8825          83 SVSYPKMA   90 (92)
Q Consensus        83 ~~~~p~~~   90 (92)
                      ..++|.+|
T Consensus       325 lGp~P~~m  332 (415)
T KOG0671|consen  325 LGPIPSRM  332 (415)
T ss_pred             hCCCcHHH
Confidence            99999876

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.62  E-value=3.6e-15  Score=87.68  Aligned_cols=89  Identities=35%  Similarity=0.599  Sum_probs=72.6

Q ss_pred             CCCCccccCCCccccccCC-CCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRP-GRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      ++++.+|+.|||.+..... .......+|+..|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+....+.
T Consensus       130 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~  209 (316)
T cd05619         130 DTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIR  209 (316)
T ss_pred             CCCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            4677899999998765432 233445689999999999988888999999999999999999999999988888887777


Q ss_pred             hCCCcCCCCC
Q psy8825          81 DHSVSYPKMA   90 (92)
Q Consensus        81 ~~~~~~p~~~   90 (92)
                      ...+.+|..+
T Consensus       210 ~~~~~~~~~~  219 (316)
T cd05619         210 MDNPCYPRWL  219 (316)
T ss_pred             hCCCCCCccC
Confidence            7766666544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.62  E-value=2.6e-16  Score=92.66  Aligned_cols=90  Identities=24%  Similarity=0.492  Sum_probs=74.9

Q ss_pred             CCCCccccCCCccccccC-CCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIR-PGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~-~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+.... ........+|+..|++||++.+..++.+.|+|++|++++++++|..||.+.+..+....+.
T Consensus       130 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~  209 (325)
T cd05594         130 DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL  209 (325)
T ss_pred             CCCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHh
Confidence            567789999999876533 2334455689999999999988888899999999999999999999999988888888888


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      .....+|..++
T Consensus       210 ~~~~~~p~~~~  220 (325)
T cd05594         210 MEEIRFPRTLS  220 (325)
T ss_pred             cCCCCCCCCCC
Confidence            88887777654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0660|consensus

Probab=99.62  E-value=1e-15  Score=89.66  Aligned_cols=85  Identities=19%  Similarity=0.224  Sum_probs=71.5

Q ss_pred             CCCCccccCCCccccccCCC---CCCCCCCcCCcCccchhhc-cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG---RGSNPRPSAYSILLFQIIL-YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~---~~~~~~~g~~~~~~pe~~~-~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~   77 (92)
                      +++-.+|+.|||+++.....   .-.+..+.|.+|.|||+.. ...|+...|+||.||++.||++|++.|.|.+..+++.
T Consensus       159 n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~  238 (359)
T KOG0660|consen  159 NADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQ  238 (359)
T ss_pred             ccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHH
Confidence            45667899999999988642   2234457899999999975 4678999999999999999999999999999999999


Q ss_pred             HHHhCCCcC
Q psy8825          78 AITDHSVSY   86 (92)
Q Consensus        78 ~i~~~~~~~   86 (92)
                      .|.+..+..
T Consensus       239 lI~~~lGtP  247 (359)
T KOG0660|consen  239 LILELLGTP  247 (359)
T ss_pred             HHHHhcCCC
Confidence            998876653

>KOG0579|consensus

Probab=99.62  E-value=6.4e-16  Score=97.06  Aligned_cols=83  Identities=17%  Similarity=0.263  Sum_probs=71.5

Q ss_pred             CCCCccccCCCccccccC-CCCCCCCCCcCCcCccchhhcc-----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIR-PGRGSNPRPSAYSILLFQIILY-----QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~-~~~~~~~~~g~~~~~~pe~~~~-----~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      .-+|.++|+|||.+.+.. ......++.||++|||||++.+     ..|+..+|+||+|+.+.+|..+.+|.+..++..+
T Consensus       164 TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRV  243 (1187)
T KOG0579|consen  164 TLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV  243 (1187)
T ss_pred             EecCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHH
Confidence            457899999999876653 4467889999999999998754     5688999999999999999999999999999999


Q ss_pred             HHHHHhCCC
Q psy8825          76 FAAITDHSV   84 (92)
Q Consensus        76 ~~~i~~~~~   84 (92)
                      +.+|..-.+
T Consensus       244 llKiaKSeP  252 (1187)
T KOG0579|consen  244 LLKIAKSEP  252 (1187)
T ss_pred             HHHHhhcCC
Confidence            988877554

>PTZ00284 protein kinase; Provisional

Probab=99.62  E-value=4.1e-15  Score=91.36  Aligned_cols=80  Identities=19%  Similarity=0.230  Sum_probs=65.9

Q ss_pred             ccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCc
Q psy8825           6 PFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVS   85 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~~~   85 (92)
                      .+||.|||.+...  .......+||..|++||++.+..++.+.|+|++|++++++++|..||.+.+..+.+..|.+...+
T Consensus       286 ~vkl~DfG~~~~~--~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~  363 (467)
T PTZ00284        286 RVRICDLGGCCDE--RHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGR  363 (467)
T ss_pred             eEEECCCCccccC--ccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCC
Confidence            5899999987432  23344678999999999998888999999999999999999999999998887777777665555


Q ss_pred             CC
Q psy8825          86 YP   87 (92)
Q Consensus        86 ~p   87 (92)
                      +|
T Consensus       364 ~p  365 (467)
T PTZ00284        364 LP  365 (467)
T ss_pred             CC
Confidence            44

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.61  E-value=1.7e-15  Score=89.22  Aligned_cols=90  Identities=23%  Similarity=0.435  Sum_probs=73.5

Q ss_pred             CCCCccccCCCccccccCC-CCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRP-GRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+..... .......+|+..|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+....+.
T Consensus       130 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~  209 (323)
T cd05575         130 DSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNIL  209 (323)
T ss_pred             CCCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHH
Confidence            5678899999998765432 233445689999999999988888889999999999999999999999988888888888


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      .....++..++
T Consensus       210 ~~~~~~~~~~~  220 (323)
T cd05575         210 NKPLRLKPNIS  220 (323)
T ss_pred             cCCCCCCCCCC
Confidence            77766665543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.61  E-value=2.6e-15  Score=87.01  Aligned_cols=89  Identities=27%  Similarity=0.470  Sum_probs=67.5

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCH----HHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE----EELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~----~~~~~   77 (92)
                      +.++.+++.|||.+.............|+..|++||.+.+..++.+.|+|++|++++++++|..||.+.+.    .....
T Consensus       136 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~  215 (285)
T cd05631         136 DDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDR  215 (285)
T ss_pred             CCCCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHH
Confidence            46678999999998776555455567899999999999888888999999999999999999999987543    23333


Q ss_pred             HHHhCCCcCCCCC
Q psy8825          78 AITDHSVSYPKMA   90 (92)
Q Consensus        78 ~i~~~~~~~p~~~   90 (92)
                      .+......++..+
T Consensus       216 ~~~~~~~~~~~~~  228 (285)
T cd05631         216 RVKEDQEEYSEKF  228 (285)
T ss_pred             HhhcccccCCccC
Confidence            3444444444443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0198|consensus

Probab=99.61  E-value=2.5e-16  Score=92.24  Aligned_cols=88  Identities=17%  Similarity=0.274  Sum_probs=68.0

Q ss_pred             CCccccCCCccccccCC----CCCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCC-CCHHHHHH
Q psy8825           4 SQPFRERTLSHQDKIRP----GRGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDG-EDEEELFA   77 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~----~~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~-~~~~~~~~   77 (92)
                      .+.+|++|||.+.....    ......+.||+.||+||++... ......|+|++||++.||++|..||.. ......+.
T Consensus       154 ~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~  233 (313)
T KOG0198|consen  154 NGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALL  233 (313)
T ss_pred             CCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHH
Confidence            47899999999888764    1234457899999999999853 234589999999999999999999988 56666666


Q ss_pred             HHHhCC--CcCCCCCC
Q psy8825          78 AITDHS--VSYPKMAV   91 (92)
Q Consensus        78 ~i~~~~--~~~p~~~~   91 (92)
                      +|....  +.+|..++
T Consensus       234 ~ig~~~~~P~ip~~ls  249 (313)
T KOG0198|consen  234 LIGREDSLPEIPDSLS  249 (313)
T ss_pred             HHhccCCCCCCCcccC
Confidence            666554  56666654

>KOG0663|consensus

Probab=99.61  E-value=2.3e-15  Score=88.14  Aligned_cols=84  Identities=17%  Similarity=0.265  Sum_probs=73.3

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      ...|-+|++|||+++..... ...+..+-|.+|.+||.+.+. .|+...|+||+||++-|++.+.+.|.|....+++.+|
T Consensus       211 ~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~I  290 (419)
T KOG0663|consen  211 SHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKI  290 (419)
T ss_pred             ccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHH
Confidence            46789999999999988654 556677889999999998875 5899999999999999999999999999999999999


Q ss_pred             HhCCCc
Q psy8825          80 TDHSVS   85 (92)
Q Consensus        80 ~~~~~~   85 (92)
                      ......
T Consensus       291 f~llGt  296 (419)
T KOG0663|consen  291 FKLLGT  296 (419)
T ss_pred             HHHhCC
Confidence            886543

>KOG0661|consensus

Probab=99.60  E-value=2.2e-15  Score=91.18  Aligned_cols=82  Identities=18%  Similarity=0.243  Sum_probs=73.8

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH   82 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~   82 (92)
                      ...+|++|||+++-......++..+.|+||.|||++.. .-|+...|+|++||+++|+.+-++.|.|.+..+++.+|.+.
T Consensus       146 ~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~V  225 (538)
T KOG0661|consen  146 NDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEV  225 (538)
T ss_pred             cceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHH
Confidence            34689999999999988888888999999999999765 45799999999999999999999999999999999999987


Q ss_pred             CCc
Q psy8825          83 SVS   85 (92)
Q Consensus        83 ~~~   85 (92)
                      ...
T Consensus       226 LGt  228 (538)
T KOG0661|consen  226 LGT  228 (538)
T ss_pred             hCC
Confidence            654

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.59  E-value=7.4e-15  Score=87.70  Aligned_cols=81  Identities=17%  Similarity=0.249  Sum_probs=68.2

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+||.|||.+.............|+..|++||++.+..++.+.|+|++|++++++++|..||.+.+..+.+.++..
T Consensus       160 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~  239 (364)
T cd07875         160 KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE  239 (364)
T ss_pred             CCCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            46778999999999776555445567899999999999888889999999999999999999999999887777666655


Q ss_pred             C
Q psy8825          82 H   82 (92)
Q Consensus        82 ~   82 (92)
                      .
T Consensus       240 ~  240 (364)
T cd07875         240 Q  240 (364)
T ss_pred             h
Confidence            3

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0659|consensus

Probab=99.59  E-value=4.5e-15  Score=84.64  Aligned_cols=84  Identities=15%  Similarity=0.248  Sum_probs=72.0

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+|++|||.++.+.... .....+-|.+|.|||.+-+ ..|+...|+|+.||++-|++.+.+-|.|.+..+++.+|
T Consensus       135 s~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~I  214 (318)
T KOG0659|consen  135 SSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKI  214 (318)
T ss_pred             cCCCcEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHH
Confidence            678999999999999886553 3444488999999999765 46899999999999999999999999999999999999


Q ss_pred             HhCCCc
Q psy8825          80 TDHSVS   85 (92)
Q Consensus        80 ~~~~~~   85 (92)
                      .+....
T Consensus       215 f~~LGT  220 (318)
T KOG0659|consen  215 FRALGT  220 (318)
T ss_pred             HHHcCC
Confidence            886543

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.59  E-value=2.2e-15  Score=88.77  Aligned_cols=88  Identities=25%  Similarity=0.408  Sum_probs=71.8

Q ss_pred             CCCCccccCCCccccccCC-CCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRP-GRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+..... .......+|+..|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+.+..+.
T Consensus       130 ~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~  209 (325)
T cd05604         130 DSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNIL  209 (325)
T ss_pred             CCCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHH
Confidence            5678899999998865432 233445689999999999988888889999999999999999999999988888888877


Q ss_pred             hCCCcCCCC
Q psy8825          81 DHSVSYPKM   89 (92)
Q Consensus        81 ~~~~~~p~~   89 (92)
                      .....++..
T Consensus       210 ~~~~~~~~~  218 (325)
T cd05604         210 HKPLVLRPG  218 (325)
T ss_pred             cCCccCCCC
Confidence            766555543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0577|consensus

Probab=99.58  E-value=1.5e-15  Score=94.55  Aligned_cols=81  Identities=16%  Similarity=0.243  Sum_probs=69.7

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc---CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY---QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFA   77 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~---~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~   77 (92)
                      |.+.|.+||.|||.+...   ...++|+||++|||||++..   ..|+.++|+||+|+...++....+|+.+.+....+.
T Consensus       159 Lse~g~VKLaDFGSAsi~---~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALY  235 (948)
T KOG0577|consen  159 LSEPGLVKLADFGSASIM---APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY  235 (948)
T ss_pred             ecCCCeeeeccccchhhc---CchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHH
Confidence            457889999999998544   44678999999999999864   568999999999999999999999999999888888


Q ss_pred             HHHhCCC
Q psy8825          78 AITDHSV   84 (92)
Q Consensus        78 ~i~~~~~   84 (92)
                      .|.++..
T Consensus       236 HIAQNes  242 (948)
T KOG0577|consen  236 HIAQNES  242 (948)
T ss_pred             HHHhcCC
Confidence            8888753

>KOG1006|consensus

Probab=99.58  E-value=2e-16  Score=90.39  Aligned_cols=86  Identities=14%  Similarity=0.176  Sum_probs=74.1

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc--CCCCchhhHHhHHHHHHHHHhCCCCCCCCC-HHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY--QPYGKSVDWWAYGVLLYEMLVGQPPFDGED-EEELFA   77 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~--~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~-~~~~~~   77 (92)
                      |++.|-+||.|||.+..+..+...+.-.|+.-|||||.+-.  .+|+.+.|+||+|+.++|+.+|..||.+.+ .++++.
T Consensus       201 ldr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~  280 (361)
T KOG1006|consen  201 LDRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLC  280 (361)
T ss_pred             EecCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHH
Confidence            46789999999999999988877777899999999999853  358899999999999999999999999865 478888


Q ss_pred             HHHhCCCcC
Q psy8825          78 AITDHSVSY   86 (92)
Q Consensus        78 ~i~~~~~~~   86 (92)
                      .+..+.++.
T Consensus       281 ~Vv~gdpp~  289 (361)
T KOG1006|consen  281 QVVIGDPPI  289 (361)
T ss_pred             HHHcCCCCe
Confidence            888887653

>KOG0984|consensus

Probab=99.58  E-value=2.7e-15  Score=83.28  Aligned_cols=86  Identities=10%  Similarity=0.176  Sum_probs=72.8

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc----CCCCchhhHHhHHHHHHHHHhCCCCCCC-CCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY----QPYGKSVDWWAYGVLLYEMLVGQPPFDG-EDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~----~~~~~~~~~ws~g~~~~~~~~g~~p~~~-~~~~~~~   76 (92)
                      +.+|.+|+.|||.+..+..+...+.-.|+.-|||||.+..    ..|+.+.|+||+|+...|+..+..||.. ..+++++
T Consensus       183 n~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qL  262 (282)
T KOG0984|consen  183 NYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQL  262 (282)
T ss_pred             ccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHH
Confidence            6789999999999999977766655789999999998753    3689999999999999999999999986 5788998


Q ss_pred             HHHHhCC-CcCC
Q psy8825          77 AAITDHS-VSYP   87 (92)
Q Consensus        77 ~~i~~~~-~~~p   87 (92)
                      ..+.+.+ +++|
T Consensus       263 kqvVeep~P~Lp  274 (282)
T KOG0984|consen  263 KQVVEEPSPQLP  274 (282)
T ss_pred             HHHhcCCCCCCc
Confidence            8888875 4444

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.57  E-value=9.2e-15  Score=86.30  Aligned_cols=90  Identities=28%  Similarity=0.510  Sum_probs=69.2

Q ss_pred             CCCCccccCCCccccccC-CCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC-------CHH
Q psy8825           2 GESQPFRERTLSHQDKIR-PGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE-------DEE   73 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~-~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~-------~~~   73 (92)
                      +.++.+||.|||.+.... ........+|+..|++||.+.+..++.+.|+|++|++++++++|..||...       ...
T Consensus       130 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~  209 (327)
T cd05617         130 DADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTED  209 (327)
T ss_pred             eCCCCEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHH
Confidence            467889999999886532 234445678999999999998888889999999999999999999999532       223


Q ss_pred             HHHHHHHhCCCcCCCCCC
Q psy8825          74 ELFAAITDHSVSYPKMAV   91 (92)
Q Consensus        74 ~~~~~i~~~~~~~p~~~~   91 (92)
                      .....+.....++|..++
T Consensus       210 ~~~~~~~~~~~~~p~~~~  227 (327)
T cd05617         210 YLFQVILEKPIRIPRFLS  227 (327)
T ss_pred             HHHHHHHhCCCCCCCCCC
Confidence            455566666667776654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.57  E-value=9.2e-15  Score=84.68  Aligned_cols=80  Identities=18%  Similarity=0.268  Sum_probs=67.5

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+|+.|||.+.............|+..|++||.+....++.+.|+|++|++++++++|.+||.+....+.+..|..
T Consensus       144 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~  223 (290)
T cd07862         144 TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD  223 (290)
T ss_pred             cCCCCEEEccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHH
Confidence            46778999999998766555445566899999999999888888899999999999999999999999887777777654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.57  E-value=1.7e-14  Score=88.25  Aligned_cols=77  Identities=18%  Similarity=0.373  Sum_probs=64.6

Q ss_pred             CccccCCCccccccCCCCCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           5 QPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         5 ~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      ..+||.|||.+..+.........+|++.|+|||++.+. .++.+.|+|++|++++++++|.+||.+....+.+.++.+
T Consensus       208 ~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~  285 (440)
T PTZ00036        208 HTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQ  285 (440)
T ss_pred             CceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence            36999999999877665555667889999999997654 578899999999999999999999999887777666654

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.57  E-value=2e-14  Score=85.72  Aligned_cols=79  Identities=16%  Similarity=0.234  Sum_probs=65.0

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+.............|+..|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+.+..+.
T Consensus       157 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~  235 (359)
T cd07876         157 KSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVI  235 (359)
T ss_pred             CCCCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            4678899999999876555545556688999999999988888889999999999999999999999877655544433

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.57  E-value=1.7e-14  Score=89.39  Aligned_cols=89  Identities=22%  Similarity=0.294  Sum_probs=71.5

Q ss_pred             CCCCccccCCCccccccCCC---CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG---RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~---~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+||.|||.++.....   ....+.+||+.|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+.+.+
T Consensus       177 ~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~  256 (496)
T PTZ00283        177 CSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHK  256 (496)
T ss_pred             eCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence            45778999999998765432   234457899999999999888899999999999999999999999999888888777


Q ss_pred             HHhCCC-cCCCCC
Q psy8825          79 ITDHSV-SYPKMA   90 (92)
Q Consensus        79 i~~~~~-~~p~~~   90 (92)
                      +..+.+ ++|..+
T Consensus       257 ~~~~~~~~~~~~~  269 (496)
T PTZ00283        257 TLAGRYDPLPPSI  269 (496)
T ss_pred             HhcCCCCCCCCCC
Confidence            776544 344443

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.56  E-value=2.4e-14  Score=88.33  Aligned_cols=83  Identities=18%  Similarity=0.284  Sum_probs=69.3

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+||.|||.+.......   ...+.+||+.|++||.+....++.+.|+|++|++++++++|..||.+.+..+.+..
T Consensus       203 ~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~  282 (478)
T PTZ00267        203 MPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQ  282 (478)
T ss_pred             CCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            567889999999987664432   24456899999999999888889999999999999999999999998888888777


Q ss_pred             HHhCCC
Q psy8825          79 ITDHSV   84 (92)
Q Consensus        79 i~~~~~   84 (92)
                      +..+.+
T Consensus       283 ~~~~~~  288 (478)
T PTZ00267        283 VLYGKY  288 (478)
T ss_pred             HHhCCC
Confidence            776654

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.56  E-value=1.2e-14  Score=85.84  Aligned_cols=90  Identities=29%  Similarity=0.525  Sum_probs=68.9

Q ss_pred             CCCCccccCCCcccccc-CCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC---------C
Q psy8825           2 GESQPFRERTLSHQDKI-RPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE---------D   71 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~-~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~---------~   71 (92)
                      +.++.+||.|||.+... .........+|+..|++||++.+..++.+.|+|++|++++++++|..||...         .
T Consensus       130 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~  209 (329)
T cd05588         130 DAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNT  209 (329)
T ss_pred             CCCCCEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccc
Confidence            46778999999988653 2334455678999999999998888888999999999999999999999531         1


Q ss_pred             HHHHHHHHHhCCCcCCCCCC
Q psy8825          72 EEELFAAITDHSVSYPKMAV   91 (92)
Q Consensus        72 ~~~~~~~i~~~~~~~p~~~~   91 (92)
                      .......+.....++|..++
T Consensus       210 ~~~~~~~~~~~~~~~p~~~~  229 (329)
T cd05588         210 EDYLFQVILEKQIRIPRSLS  229 (329)
T ss_pred             hHHHHHHHHcCCCCCCCCCC
Confidence            22345566667777776654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.56  E-value=1.4e-15  Score=89.38  Aligned_cols=90  Identities=21%  Similarity=0.441  Sum_probs=75.4

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+...... ......+|+..|++||.+....++.+.|+|++|++++++++|..||.+.+..+.+..+.
T Consensus       132 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~  211 (318)
T cd05582         132 DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMIL  211 (318)
T ss_pred             CCCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHH
Confidence            46778999999988665443 33445789999999999988888889999999999999999999999988888888888


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      +....+|..++
T Consensus       212 ~~~~~~p~~~~  222 (318)
T cd05582         212 KAKLGMPQFLS  222 (318)
T ss_pred             cCCCCCCCCCC
Confidence            88888777654

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.56  E-value=2.8e-14  Score=82.57  Aligned_cols=81  Identities=25%  Similarity=0.395  Sum_probs=65.0

Q ss_pred             CCCCccccCCCccccccCCC--CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG--RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~--~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+|+.|||.+......  .......|+..|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+....+
T Consensus       134 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~  213 (287)
T cd07848         134 SHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTI  213 (287)
T ss_pred             cCCCcEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            46778999999998776433  2334467899999999998888888999999999999999999999988766665555


Q ss_pred             HhC
Q psy8825          80 TDH   82 (92)
Q Consensus        80 ~~~   82 (92)
                      .+.
T Consensus       214 ~~~  216 (287)
T cd07848         214 QKV  216 (287)
T ss_pred             HHh
Confidence            443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0586|consensus

Probab=99.56  E-value=1e-15  Score=94.44  Aligned_cols=91  Identities=21%  Similarity=0.319  Sum_probs=82.6

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      |+.+.-+|++|||++..+..+...+++||++-|.+||+..+..| +...|+|++|+++|.+..|.+||.+.+..+.-.++
T Consensus       188 L~~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rv  267 (596)
T KOG0586|consen  188 LDENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRV  267 (596)
T ss_pred             cccccceeeeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchh
Confidence            34556699999999999998899999999999999999998888 78899999999999999999999999988888899


Q ss_pred             HhCCCcCCCCCC
Q psy8825          80 TDHSVSYPKMAV   91 (92)
Q Consensus        80 ~~~~~~~p~~~~   91 (92)
                      +.+.+++|..|+
T Consensus       268 l~gk~rIp~~ms  279 (596)
T KOG0586|consen  268 LRGKYRIPFYMS  279 (596)
T ss_pred             eeeeecccceee
Confidence            999999988764

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.55  E-value=8.2e-15  Score=88.00  Aligned_cols=56  Identities=34%  Similarity=0.651  Sum_probs=49.6

Q ss_pred             CCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825          26 PRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus        26 ~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.+||+.|+|||++.+..++.+.|+|++|++++++++|..||.+.+..+...++..
T Consensus       207 ~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~  262 (382)
T cd05625         207 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVIN  262 (382)
T ss_pred             ccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence            35799999999999888899999999999999999999999999887777666665

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.55  E-value=8.5e-15  Score=87.83  Aligned_cols=88  Identities=24%  Similarity=0.533  Sum_probs=69.3

Q ss_pred             CCCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCC----CCchhhHHhHHHHHHHHHhCCCCCCCCCHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQP----YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE   74 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~----~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~   74 (92)
                      +++++.+||+|||.+.......  ...+.+||+.|+|||++....    ++.+.|+|++|++++++++|..||.+.+...
T Consensus       175 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~  254 (370)
T cd05621         175 LDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG  254 (370)
T ss_pred             ECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH
Confidence            3567889999999987664332  335678999999999986532    6788999999999999999999999988877


Q ss_pred             HHHHHHhCC--CcCCC
Q psy8825          75 LFAAITDHS--VSYPK   88 (92)
Q Consensus        75 ~~~~i~~~~--~~~p~   88 (92)
                      .+.+|....  +.+|.
T Consensus       255 ~~~~i~~~~~~~~~p~  270 (370)
T cd05621         255 TYSKIMDHKNSLNFPE  270 (370)
T ss_pred             HHHHHHhCCcccCCCC
Confidence            777777643  44554

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.55  E-value=1.2e-14  Score=87.24  Aligned_cols=82  Identities=26%  Similarity=0.507  Sum_probs=66.8

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCC----CCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQP----YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~----~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      +.++.+||.|||.+.......  ...+.+||+.|++||++....    ++.+.|+|++|++++++++|..||.+.+....
T Consensus       176 ~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~  255 (371)
T cd05622         176 DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT  255 (371)
T ss_pred             CCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHH
Confidence            567889999999987664332  334678999999999986532    67889999999999999999999999888878


Q ss_pred             HHHHHhCC
Q psy8825          76 FAAITDHS   83 (92)
Q Consensus        76 ~~~i~~~~   83 (92)
                      +.+|....
T Consensus       256 ~~~i~~~~  263 (371)
T cd05622         256 YSKIMNHK  263 (371)
T ss_pred             HHHHHcCC
Confidence            88877643

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.55  E-value=3.4e-14  Score=84.60  Aligned_cols=78  Identities=17%  Similarity=0.201  Sum_probs=65.0

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+||.|||.+.............|+..|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+.+..+
T Consensus       153 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~  230 (355)
T cd07874         153 KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV  230 (355)
T ss_pred             CCCCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            467789999999987765555555678999999999998888889999999999999999999999987765554443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.54  E-value=4.9e-15  Score=88.37  Aligned_cols=80  Identities=21%  Similarity=0.490  Sum_probs=65.5

Q ss_pred             CCCCccccCCCccccccCCCC------------------------------------CCCCCCcCCcCccchhhccCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGR------------------------------------GSNPRPSAYSILLFQIILYQPYG   45 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~------------------------------------~~~~~~g~~~~~~pe~~~~~~~~   45 (92)
                      +.++.++|.|||.+..+....                                    ...+.+||+.|+|||++.+..++
T Consensus       135 ~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~  214 (360)
T cd05627         135 DAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYN  214 (360)
T ss_pred             CCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCC
Confidence            567889999999876543211                                    11245799999999999888899


Q ss_pred             chhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825          46 KSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus        46 ~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      .+.|+|++|++++++++|..||.+.+....+.++..
T Consensus       215 ~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~  250 (360)
T cd05627         215 KLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMN  250 (360)
T ss_pred             CcceeccccceeeecccCCCCCCCCCHHHHHHHHHc
Confidence            999999999999999999999999888877777765

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.54  E-value=2.1e-14  Score=84.89  Aligned_cols=90  Identities=28%  Similarity=0.500  Sum_probs=68.5

Q ss_pred             CCCCccccCCCccccccC-CCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC---------C
Q psy8825           2 GESQPFRERTLSHQDKIR-PGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE---------D   71 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~-~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~---------~   71 (92)
                      +.++.+||.|||.+.... ........+|+..|++||.+.+..++.+.|+|++|++++++++|..||...         .
T Consensus       130 ~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~  209 (329)
T cd05618         130 DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT  209 (329)
T ss_pred             CCCCCEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCccccc
Confidence            567889999999886532 233445678999999999998888888999999999999999999999521         1


Q ss_pred             HHHHHHHHHhCCCcCCCCCC
Q psy8825          72 EEELFAAITDHSVSYPKMAV   91 (92)
Q Consensus        72 ~~~~~~~i~~~~~~~p~~~~   91 (92)
                      .......+......+|..++
T Consensus       210 ~~~~~~~i~~~~~~~p~~~~  229 (329)
T cd05618         210 EDYLFQVILEKQIRIPRSLS  229 (329)
T ss_pred             HHHHHHHHhcCCCCCCCCCC
Confidence            23345556666777776553

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.54  E-value=2.6e-14  Score=85.91  Aligned_cols=56  Identities=32%  Similarity=0.644  Sum_probs=48.7

Q ss_pred             CCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825          26 PRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus        26 ~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.+||..|++||.+.+..++.+.|+|++|++++++++|..||...+..+...++..
T Consensus       207 ~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~  262 (381)
T cd05626         207 SLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVIN  262 (381)
T ss_pred             cccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHc
Confidence            46799999999999888888999999999999999999999998777666556553

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.54  E-value=4e-14  Score=82.08  Aligned_cols=89  Identities=22%  Similarity=0.425  Sum_probs=67.0

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH----HHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE----LFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~----~~~   77 (92)
                      ++++.+++.|||.+............+|+..|++||.+....++.+.|+|++|++++++++|..||.+.+...    ...
T Consensus       136 ~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~  215 (285)
T cd05605         136 DDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVER  215 (285)
T ss_pred             CCCCCEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHH
Confidence            4567899999999876654444455689999999999988788888999999999999999999998865532    233


Q ss_pred             HHHhCCCcCCCCC
Q psy8825          78 AITDHSVSYPKMA   90 (92)
Q Consensus        78 ~i~~~~~~~p~~~   90 (92)
                      .+......+|..+
T Consensus       216 ~~~~~~~~~~~~~  228 (285)
T cd05605         216 RVKEDQEEYSEKF  228 (285)
T ss_pred             HhhhcccccCccc
Confidence            3444444444433

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.53  E-value=1.7e-14  Score=86.06  Aligned_cols=57  Identities=33%  Similarity=0.740  Sum_probs=50.4

Q ss_pred             CCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q psy8825          26 PRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH   82 (92)
Q Consensus        26 ~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~   82 (92)
                      +.+||+.|++||++....++.+.|+|++|++++++++|..||.+.+..+.+..+...
T Consensus       198 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~  254 (364)
T cd05599         198 STVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINW  254 (364)
T ss_pred             ccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcC
Confidence            357999999999998888899999999999999999999999998887777777654

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.53  E-value=5.3e-14  Score=81.41  Aligned_cols=80  Identities=19%  Similarity=0.286  Sum_probs=66.1

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+||.|||.+.............|+..|++||.+.+..++.+.|+|++|++++++++|.++|.+....+.+.++..
T Consensus       142 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~  221 (288)
T cd07863         142 TSGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD  221 (288)
T ss_pred             CCCCCEEECccCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHH
Confidence            46778999999998766554444556789999999999888888999999999999999999999988877666666544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG1026|consensus

Probab=99.53  E-value=1.4e-14  Score=92.06  Aligned_cols=90  Identities=22%  Similarity=0.403  Sum_probs=72.8

Q ss_pred             CCCCccccCCCccccccCCCCCCCCC---CcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPR---PSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~---~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      |+.-.+|++|||+++..-...-++..   .--.+||+||.+.+.+|+...|+|++|+++||+++ |..||.+..+.+++.
T Consensus       637 ge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe  716 (774)
T KOG1026|consen  637 GENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIE  716 (774)
T ss_pred             ccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHH
Confidence            55668999999999776444322222   12358999999999999999999999999999998 899999999999999


Q ss_pred             HHHhCC-CcCCCCCC
Q psy8825          78 AITDHS-VSYPKMAV   91 (92)
Q Consensus        78 ~i~~~~-~~~p~~~~   91 (92)
                      .|..+. +..|+..|
T Consensus       717 ~i~~g~lL~~Pe~CP  731 (774)
T KOG1026|consen  717 CIRAGQLLSCPENCP  731 (774)
T ss_pred             HHHcCCcccCCCCCC
Confidence            999986 46566544

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.53  E-value=1.5e-14  Score=85.83  Aligned_cols=88  Identities=26%  Similarity=0.574  Sum_probs=70.6

Q ss_pred             CCCCCccccCCCccccccCCCC------------------------------CCCCCCcCCcCccchhhccCCCCchhhH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGR------------------------------GSNPRPSAYSILLFQIILYQPYGKSVDW   50 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~------------------------------~~~~~~g~~~~~~pe~~~~~~~~~~~~~   50 (92)
                      +++++.+||.|||.+.......                              ......|++.|++||.+.+..++.+.|+
T Consensus       134 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di  213 (350)
T cd05573         134 IDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDW  213 (350)
T ss_pred             ECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceee
Confidence            3567889999999887654432                              2344579999999999988888999999


Q ss_pred             HhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCCcCCC
Q psy8825          51 WAYGVLLYEMLVGQPPFDGEDEEELFAAITD--HSVSYPK   88 (92)
Q Consensus        51 ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~--~~~~~p~   88 (92)
                      |++|++++++++|..||.+.+......++..  ....+|.
T Consensus       214 wSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~  253 (350)
T cd05573         214 WSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPP  253 (350)
T ss_pred             EecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCC
Confidence            9999999999999999998887777777776  3444443

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG4645|consensus

Probab=99.52  E-value=1.1e-15  Score=100.70  Aligned_cols=91  Identities=14%  Similarity=0.206  Sum_probs=74.1

Q ss_pred             CCCCCccccCCCccccccCCCC-----CCCCCCcCCcCccchhhccC---CCCchhhHHhHHHHHHHHHhCCCCCCCC-C
Q psy8825           1 MGESQPFRERTLSHQDKIRPGR-----GSNPRPSAYSILLFQIILYQ---PYGKSVDWWAYGVLLYEMLVGQPPFDGE-D   71 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~-----~~~~~~g~~~~~~pe~~~~~---~~~~~~~~ws~g~~~~~~~~g~~p~~~~-~   71 (92)
                      |+-.|.+|+.|||.+.++..+.     ..+...||+.|||||++.+.   +.....|+|++||++.||.+|+.||... +
T Consensus      1367 Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn 1446 (1509)
T KOG4645|consen 1367 LDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN 1446 (1509)
T ss_pred             eecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc
Confidence            3557899999999999887663     23456899999999998653   4567899999999999999999999874 5


Q ss_pred             HHHHHHHHHhC-CCcCCCCCC
Q psy8825          72 EEELFAAITDH-SVSYPKMAV   91 (92)
Q Consensus        72 ~~~~~~~i~~~-~~~~p~~~~   91 (92)
                      .+.++.++..+ .+++|..++
T Consensus      1447 e~aIMy~V~~gh~Pq~P~~ls 1467 (1509)
T KOG4645|consen 1447 EWAIMYHVAAGHKPQIPERLS 1467 (1509)
T ss_pred             hhHHHhHHhccCCCCCchhhh
Confidence            67888888776 478887765

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.52  E-value=3e-14  Score=84.20  Aligned_cols=78  Identities=23%  Similarity=0.435  Sum_probs=65.6

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+||.|||.+.....  .....+|++.|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+....+..
T Consensus       135 ~~~~~~kL~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~  212 (333)
T cd05600         135 DASGHIKLTDFGLSKGIVT--YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKY  212 (333)
T ss_pred             CCCCCEEEEeCcCCccccc--ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHh
Confidence            5678899999999865533  34556899999999999888889999999999999999999999998887776666554

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.52  E-value=3.8e-14  Score=85.02  Aligned_cols=88  Identities=26%  Similarity=0.555  Sum_probs=69.1

Q ss_pred             CCCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccC----CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQ----PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE   74 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~----~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~   74 (92)
                      +++++.+||.|||.+.......  .....+|++.|+|||.+...    .++.+.|+|++|++++++++|..||.+.+...
T Consensus       175 l~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~  254 (370)
T cd05596         175 LDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG  254 (370)
T ss_pred             EcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH
Confidence            3567889999999987654332  33456899999999998643    36788999999999999999999999988887


Q ss_pred             HHHHHHhCC--CcCCC
Q psy8825          75 LFAAITDHS--VSYPK   88 (92)
Q Consensus        75 ~~~~i~~~~--~~~p~   88 (92)
                      .+..|....  +.+|.
T Consensus       255 ~~~~i~~~~~~~~~~~  270 (370)
T cd05596         255 TYSKIMDHKNSLTFPD  270 (370)
T ss_pred             HHHHHHcCCCcCCCCC
Confidence            888877643  44454

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>PHA02988 hypothetical protein; Provisional

Probab=99.51  E-value=9e-14  Score=80.71  Aligned_cols=80  Identities=15%  Similarity=0.303  Sum_probs=64.5

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc--CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY--QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~--~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      ++++.+|+.|||.+......  .....|+..|++||.+..  ..++.+.|+||+|+++|++++|..||.+.+..+....+
T Consensus       157 ~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i  234 (283)
T PHA02988        157 TENYKLKIICHGLEKILSSP--PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLI  234 (283)
T ss_pred             CCCCcEEEcccchHhhhccc--cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            46778999999988654322  234578889999999865  57889999999999999999999999988887777777


Q ss_pred             HhCC
Q psy8825          80 TDHS   83 (92)
Q Consensus        80 ~~~~   83 (92)
                      ....
T Consensus       235 ~~~~  238 (283)
T PHA02988        235 INKN  238 (283)
T ss_pred             HhcC
Confidence            5443

>KOG4279|consensus

Probab=99.50  E-value=2.7e-15  Score=95.01  Aligned_cols=87  Identities=17%  Similarity=0.340  Sum_probs=68.0

Q ss_pred             CCccccCCCccccccCC-CCCCCCCCcCCcCccchhhcc--CCCCchhhHHhHHHHHHHHHhCCCCCCCC-CHHHHHHHH
Q psy8825           4 SQPFRERTLSHQDKIRP-GRGSNPRPSAYSILLFQIILY--QPYGKSVDWWAYGVLLYEMLVGQPPFDGE-DEEELFAAI   79 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~--~~~~~~~~~ws~g~~~~~~~~g~~p~~~~-~~~~~~~~i   79 (92)
                      +|.+|++|||-++.+-. +.+..++.||.-|||||++-.  .+|+..+|+||+||...||.+|++||... .+...+.++
T Consensus       712 SGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkV  791 (1226)
T KOG4279|consen  712 SGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKV  791 (1226)
T ss_pred             cceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhh
Confidence            57899999999888843 567889999999999999854  46899999999999999999999999754 344444443


Q ss_pred             H--hCCCcCCCCC
Q psy8825          80 T--DHSVSYPKMA   90 (92)
Q Consensus        80 ~--~~~~~~p~~~   90 (92)
                      -  +.-+++|..+
T Consensus       792 GmyKvHP~iPeel  804 (1226)
T KOG4279|consen  792 GMYKVHPPIPEEL  804 (1226)
T ss_pred             cceecCCCCcHHH
Confidence            3  2345555543

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.50  E-value=1.4e-13  Score=79.92  Aligned_cols=80  Identities=20%  Similarity=0.313  Sum_probs=63.6

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      ++++.+|+.|||.+...... .......++..|++||.+.+ ..++.+.|+|++|++++++++|..||.+.+..+.+..+
T Consensus       137 ~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~  216 (288)
T cd07871         137 NEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLI  216 (288)
T ss_pred             CCCCCEEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            46778999999988655432 23445678999999998865 45788999999999999999999999988877666655


Q ss_pred             Hh
Q psy8825          80 TD   81 (92)
Q Consensus        80 ~~   81 (92)
                      .+
T Consensus       217 ~~  218 (288)
T cd07871         217 FR  218 (288)
T ss_pred             HH
Confidence            54

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.50  E-value=1.3e-14  Score=85.69  Aligned_cols=88  Identities=25%  Similarity=0.430  Sum_probs=71.1

Q ss_pred             CCCCccccCCCccccccCC-CCCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRP-GRGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.++|.|||.+..... .......+|+..|++||.+... .++.+.|+|++|++++++++|..||.+.+..+.+..+
T Consensus       130 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i  209 (330)
T cd05586         130 DATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNI  209 (330)
T ss_pred             CCCCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHH
Confidence            4677899999998865433 3344567899999999998654 4688899999999999999999999998888888888


Q ss_pred             HhCCCcCCCC
Q psy8825          80 TDHSVSYPKM   89 (92)
Q Consensus        80 ~~~~~~~p~~   89 (92)
                      ......+|..
T Consensus       210 ~~~~~~~~~~  219 (330)
T cd05586         210 AFGKVRFPKN  219 (330)
T ss_pred             HcCCCCCCCc
Confidence            8777776653

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.50  E-value=3.2e-14  Score=85.32  Aligned_cols=55  Identities=33%  Similarity=0.744  Sum_probs=49.2

Q ss_pred             CCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825          27 RPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus        27 ~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      .+||+.|++||++.+..++.+.|+|++|++++++++|..||.+.+..+.+..+..
T Consensus       208 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~  262 (377)
T cd05629         208 TVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIIN  262 (377)
T ss_pred             cCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHc
Confidence            5799999999999888889999999999999999999999998887777777664

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.49  E-value=6.7e-14  Score=82.66  Aligned_cols=90  Identities=21%  Similarity=0.381  Sum_probs=67.0

Q ss_pred             CCCCccccCCCccccccCCC--CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCC----CHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG--RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGE----DEEE   74 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~--~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~----~~~~   74 (92)
                      +.++.+||.|||.+......  ......+|+..|++||.+.+. .++.+.|+|++|++++++++|..||...    ....
T Consensus       139 ~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~  218 (332)
T cd05614         139 DSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSE  218 (332)
T ss_pred             CCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHH
Confidence            56778999999988765333  233356899999999998764 3677899999999999999999999643    2344


Q ss_pred             HHHHHHhCCCcCCCCCC
Q psy8825          75 LFAAITDHSVSYPKMAV   91 (92)
Q Consensus        75 ~~~~i~~~~~~~p~~~~   91 (92)
                      ...++....+.+|..++
T Consensus       219 ~~~~~~~~~~~~~~~~~  235 (332)
T cd05614         219 VSRRILKCDPPFPSFIG  235 (332)
T ss_pred             HHHHHhcCCCCCCCCCC
Confidence            55566666666666543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.49  E-value=4.5e-14  Score=83.49  Aligned_cols=82  Identities=27%  Similarity=0.452  Sum_probs=65.5

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhcc-----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILY-----QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE   74 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~-----~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~   74 (92)
                      +.++.+||.|||.+.......  .....+|++.|++||++..     ..++.+.|+|++|++++++++|..||.+.+..+
T Consensus       136 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~  215 (332)
T cd05623         136 DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE  215 (332)
T ss_pred             CCCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHH
Confidence            567889999999886654332  2334579999999999852     346788999999999999999999999988888


Q ss_pred             HHHHHHhCC
Q psy8825          75 LFAAITDHS   83 (92)
Q Consensus        75 ~~~~i~~~~   83 (92)
                      .+.++....
T Consensus       216 ~~~~i~~~~  224 (332)
T cd05623         216 TYGKIMNHK  224 (332)
T ss_pred             HHHHHhCCC
Confidence            888776653

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.48  E-value=2.7e-14  Score=85.58  Aligned_cols=57  Identities=33%  Similarity=0.654  Sum_probs=49.6

Q ss_pred             CCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q psy8825          26 PRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH   82 (92)
Q Consensus        26 ~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~   82 (92)
                      +.+||+.|++||++.+..++.+.|+|++|++++++++|..||.+.+..+...++...
T Consensus       203 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~  259 (376)
T cd05598         203 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINW  259 (376)
T ss_pred             ccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhcc
Confidence            457999999999998888889999999999999999999999988877766666543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG1095|consensus

Probab=99.48  E-value=8.6e-14  Score=90.89  Aligned_cols=90  Identities=14%  Similarity=0.291  Sum_probs=69.0

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCc----CCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPS----AYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEEL   75 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g----~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~   75 (92)
                      |+++..+|+.|||+++-+.... +...-|    -..||+||.+....|+.+.|+|++|+++||+++ |..||.+.++.++
T Consensus       835 L~~~r~VKIaDFGlArDiy~~~-yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v  913 (1025)
T KOG1095|consen  835 LDERRVVKIADFGLARDIYDKD-YYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV  913 (1025)
T ss_pred             ecccCcEEEcccchhHhhhhch-heeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH
Confidence            4566789999999998442222 212112    248999999999999999999999999999998 9999999999999


Q ss_pred             HHHHHhC-CCcCCCCCC
Q psy8825          76 FAAITDH-SVSYPKMAV   91 (92)
Q Consensus        76 ~~~i~~~-~~~~p~~~~   91 (92)
                      +..+.++ ..+.|.+.+
T Consensus       914 ~~~~~~ggRL~~P~~CP  930 (1025)
T KOG1095|consen  914 LLDVLEGGRLDPPSYCP  930 (1025)
T ss_pred             HHHHHhCCccCCCCCCC
Confidence            8855554 456666543

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.48  E-value=2.6e-13  Score=80.12  Aligned_cols=75  Identities=13%  Similarity=0.166  Sum_probs=58.9

Q ss_pred             CCCCccccCCCccccccCCCC----CCCCCCcCCcCccchhhcc--CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR----GSNPRPSAYSILLFQIILY--QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~----~~~~~~g~~~~~~pe~~~~--~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      +.++.+||+|||.+.......    .....+|+..|++||++..  ..++.+.|+|++|++++++++|..||.+.+....
T Consensus       137 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~  216 (338)
T cd07859         137 NADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQ  216 (338)
T ss_pred             CCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHH
Confidence            567889999999986543221    2234679999999999865  5678899999999999999999999988765444


Q ss_pred             H
Q psy8825          76 F   76 (92)
Q Consensus        76 ~   76 (92)
                      +
T Consensus       217 ~  217 (338)
T cd07859         217 L  217 (338)
T ss_pred             H
Confidence            3

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.48  E-value=2.5e-13  Score=78.63  Aligned_cols=89  Identities=27%  Similarity=0.443  Sum_probs=65.8

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCH----HHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE----EELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~----~~~~   76 (92)
                      +.++.+++.|||.+..+.... ......|+..|++||.+.+..++.+.|+|++|++++++++|..||.....    ....
T Consensus       131 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~  210 (280)
T cd05608         131 DNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK  210 (280)
T ss_pred             CCCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHH
Confidence            456789999999887654432 33446789999999999888888899999999999999999999976432    2334


Q ss_pred             HHHHhCCCcCCCCC
Q psy8825          77 AAITDHSVSYPKMA   90 (92)
Q Consensus        77 ~~i~~~~~~~p~~~   90 (92)
                      ..+......+|..+
T Consensus       211 ~~~~~~~~~~~~~~  224 (280)
T cd05608         211 QRILNDSVTYPDKF  224 (280)
T ss_pred             HhhcccCCCCcccC
Confidence            44444444444433

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.47  E-value=3.9e-13  Score=78.00  Aligned_cols=72  Identities=31%  Similarity=0.516  Sum_probs=60.2

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEE   73 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~   73 (92)
                      +.++.+++.|||.+.............|+..|++||.+.+..++.+.|+|++|++++++++|..||.+....
T Consensus       136 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~  207 (285)
T cd05632         136 DDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK  207 (285)
T ss_pred             CCCCCEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence            456789999999887665444455668999999999998888888899999999999999999999876654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.47  E-value=4.9e-14  Score=83.36  Aligned_cols=88  Identities=26%  Similarity=0.473  Sum_probs=67.7

Q ss_pred             CCCCccccCCCccccccCCCCC--CCCCCcCCcCccchhhcc-----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG--SNPRPSAYSILLFQIILY-----QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE   74 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~--~~~~~g~~~~~~pe~~~~-----~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~   74 (92)
                      +.++.+||.|||.+........  ....+|+..|++||.+..     ..++.+.|+|++|++++++++|..||.+.+..+
T Consensus       136 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~  215 (331)
T cd05624         136 DMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE  215 (331)
T ss_pred             cCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH
Confidence            4677899999999876644322  234579999999999864     346778999999999999999999999888877


Q ss_pred             HHHHHHhCC--CcCCCC
Q psy8825          75 LFAAITDHS--VSYPKM   89 (92)
Q Consensus        75 ~~~~i~~~~--~~~p~~   89 (92)
                      .+.++....  +++|..
T Consensus       216 ~~~~i~~~~~~~~~p~~  232 (331)
T cd05624         216 TYGKIMNHEERFQFPSH  232 (331)
T ss_pred             HHHHHHcCCCcccCCCc
Confidence            777776643  344443

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.47  E-value=4.7e-13  Score=77.74  Aligned_cols=88  Identities=28%  Similarity=0.587  Sum_probs=71.9

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+|+.|||.+......  ....+|+..|++||.+.+...+.+.|+|++|++++++++|..||...+.......+..
T Consensus       135 ~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  212 (290)
T cd05580         135 DSDGYIKITDFGFAKRVKGR--TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILE  212 (290)
T ss_pred             CCCCCEEEeeCCCccccCCC--CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence            45678999999988766443  3456788999999998777778889999999999999999999988887777778887


Q ss_pred             CCCcCCCCCC
Q psy8825          82 HSVSYPKMAV   91 (92)
Q Consensus        82 ~~~~~p~~~~   91 (92)
                      +...+|..++
T Consensus       213 ~~~~~~~~~~  222 (290)
T cd05580         213 GKVRFPSFFS  222 (290)
T ss_pred             CCccCCccCC
Confidence            7777776553

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0587|consensus

Probab=99.46  E-value=1.2e-14  Score=92.97  Aligned_cols=85  Identities=15%  Similarity=0.219  Sum_probs=73.2

Q ss_pred             CCCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhcc-----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILY-----QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE   74 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~-----~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~   74 (92)
                      |.+.+.+||.|||.+..+... .+..+.+||+.|||||++-+     ..|+...|+|++|+...|+..|.+|+....+..
T Consensus       156 LT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr  235 (953)
T KOG0587|consen  156 LTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR  235 (953)
T ss_pred             EeccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh
Confidence            467889999999998877544 67888999999999999854     347888999999999999999999999999999


Q ss_pred             HHHHHHhCCCc
Q psy8825          75 LFAAITDHSVS   85 (92)
Q Consensus        75 ~~~~i~~~~~~   85 (92)
                      .+.+|.+++++
T Consensus       236 aLF~IpRNPPP  246 (953)
T KOG0587|consen  236 ALFLIPRNPPP  246 (953)
T ss_pred             hhccCCCCCCc
Confidence            99888887653

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.46  E-value=2.6e-13  Score=79.07  Aligned_cols=69  Identities=6%  Similarity=-0.137  Sum_probs=56.9

Q ss_pred             CCCCccccCCCccccccCCCC--------CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--------GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--------~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      +.++.+++.|||.+..+....        ......||+.|++||...+..++.+.|+||+|++++++++|..||.+.
T Consensus       160 ~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~  236 (294)
T PHA02882        160 DGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGF  236 (294)
T ss_pred             cCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcc
Confidence            456778999999987664321        122357999999999998888999999999999999999999999876

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.45  E-value=4.8e-13  Score=80.89  Aligned_cols=68  Identities=15%  Similarity=0.171  Sum_probs=55.3

Q ss_pred             CCCCccccCCCccccccCCC--CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPG--RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~--~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      +.++.+||.|||.+......  ......+||+.|++||++.+..++.+.|+|++|++++++++|..|+.+
T Consensus       216 ~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~  285 (391)
T PHA03212        216 NHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE  285 (391)
T ss_pred             cCCCCEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence            45678999999998654322  233456899999999999888889999999999999999999877654

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.45  E-value=6.1e-13  Score=87.36  Aligned_cols=81  Identities=15%  Similarity=0.250  Sum_probs=61.6

Q ss_pred             CccccCCCccccccCCCCCCCCCCcCCcCccchhhcc--CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q psy8825           5 QPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY--QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH   82 (92)
Q Consensus         5 ~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~--~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~   82 (92)
                      ..+||.|||.+..+.........+||+.|++||++..  ..++.+.|+|++|++++++++|..||...+....+..+...
T Consensus       179 ~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~  258 (1021)
T PTZ00266        179 PIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKR  258 (1021)
T ss_pred             CceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhc
Confidence            4589999999877655544556689999999999854  34788899999999999999999999876554444444443


Q ss_pred             CCc
Q psy8825          83 SVS   85 (92)
Q Consensus        83 ~~~   85 (92)
                      .+.
T Consensus       259 ~p~  261 (1021)
T PTZ00266        259 GPD  261 (1021)
T ss_pred             CCC
Confidence            333

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.44  E-value=2.6e-13  Score=80.27  Aligned_cols=81  Identities=27%  Similarity=0.480  Sum_probs=63.4

Q ss_pred             CCCCccccCCCccccccCCCCC--CCCCCcCCcCccchhhcc-----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG--SNPRPSAYSILLFQIILY-----QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE   74 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~--~~~~~g~~~~~~pe~~~~-----~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~   74 (92)
                      +.++.+||.|||.+..+.....  ....+|++.|++||++..     ..++.+.|+|++|++++++++|..||.+.+..+
T Consensus       136 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~  215 (331)
T cd05597         136 DKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE  215 (331)
T ss_pred             CCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHH
Confidence            4678899999999866544322  223479999999999863     345778999999999999999999999888777


Q ss_pred             HHHHHHhC
Q psy8825          75 LFAAITDH   82 (92)
Q Consensus        75 ~~~~i~~~   82 (92)
                      .+.++...
T Consensus       216 ~~~~i~~~  223 (331)
T cd05597         216 TYGKIMNH  223 (331)
T ss_pred             HHHHHHcC
Confidence            77776653

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.44  E-value=8.8e-13  Score=78.58  Aligned_cols=80  Identities=19%  Similarity=0.254  Sum_probs=65.6

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+||.|||.+.............++..|++||.+.+..++.+.|+|++|++++++++|..||.+.+......++..
T Consensus       152 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~  231 (353)
T cd07850         152 KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIE  231 (353)
T ss_pred             CCCCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence            45678999999998766544444456788899999999888889999999999999999999999998877666655544

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.44  E-value=6.9e-13  Score=78.68  Aligned_cols=78  Identities=21%  Similarity=0.307  Sum_probs=62.2

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||+|||.+.....  ......|+..|++||++.+ ..++.+.|+|++|++++++++|..||.+.+..+.+.++.
T Consensus       152 ~~~~~~kl~Dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~  229 (343)
T cd07878         152 NEDCELRILDFGLARQADD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIM  229 (343)
T ss_pred             CCCCCEEEcCCccceecCC--CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence            4677899999999876543  2345678999999999866 457888999999999999999999998877666555554


Q ss_pred             h
Q psy8825          81 D   81 (92)
Q Consensus        81 ~   81 (92)
                      +
T Consensus       230 ~  230 (343)
T cd07878         230 E  230 (343)
T ss_pred             H
Confidence            3

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG0603|consensus

Probab=99.44  E-value=1.7e-13  Score=85.12  Aligned_cols=80  Identities=24%  Similarity=0.481  Sum_probs=66.7

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEE-ELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~-~~~~~i~   80 (92)
                      |.++.++++|||..+-....  +.+.|=|..|.|||++....|+...|+||+|+++|+|++|..||...... +++.+|.
T Consensus       450 ~~~g~lrltyFG~a~~~~~~--~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~  527 (612)
T KOG0603|consen  450 GSAGHLRLTYFGFWSELERS--CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQ  527 (612)
T ss_pred             CCCCcEEEEEechhhhCchh--hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhc
Confidence            57889999999998666444  55667788999999999889999999999999999999999999887654 6666665


Q ss_pred             hCC
Q psy8825          81 DHS   83 (92)
Q Consensus        81 ~~~   83 (92)
                      .+.
T Consensus       528 ~~~  530 (612)
T KOG0603|consen  528 MPK  530 (612)
T ss_pred             CCc
Confidence            543

>KOG4236|consensus

Probab=99.44  E-value=6.3e-15  Score=91.02  Aligned_cols=71  Identities=20%  Similarity=0.347  Sum_probs=62.6

Q ss_pred             ccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC-CHHHHH
Q psy8825           6 PFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE-DEEELF   76 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~-~~~~~~   76 (92)
                      .+||.|||+++.+....-..+++||+.|++||++...+|+++.|+||.|+++|-.++|..||..+ +-.+++
T Consensus       705 QvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQI  776 (888)
T KOG4236|consen  705 QVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQI  776 (888)
T ss_pred             ceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHh
Confidence            57999999999998887778899999999999999999999999999999999999999999754 334443

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.42  E-value=1.2e-12  Score=77.47  Aligned_cols=73  Identities=18%  Similarity=0.251  Sum_probs=60.1

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      ..++.+||.|||.+..... .......|+..|++||.+.+..++.+.|+|++|++++++++|..||...+..+.
T Consensus       138 ~~~~~~kl~Dfg~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~  210 (331)
T cd06649         138 NSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKEL  210 (331)
T ss_pred             cCCCcEEEccCcccccccc-cccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            3567899999998876533 233456799999999999888889999999999999999999999987665544

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.42  E-value=1.3e-12  Score=78.33  Aligned_cols=80  Identities=16%  Similarity=0.216  Sum_probs=62.8

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+||.|||.+.......  ......++..|++||.+.+. .++.+.|+|++|++++++++|..||.+.+..+.+..
T Consensus       137 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~  216 (372)
T cd07853         137 NSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDL  216 (372)
T ss_pred             CCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence            567789999999887654332  23345678899999998764 468889999999999999999999998887766666


Q ss_pred             HHh
Q psy8825          79 ITD   81 (92)
Q Consensus        79 i~~   81 (92)
                      |..
T Consensus       217 i~~  219 (372)
T cd07853         217 ITD  219 (372)
T ss_pred             HHH
Confidence            543

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0596|consensus

Probab=99.42  E-value=1.2e-13  Score=85.23  Aligned_cols=67  Identities=16%  Similarity=0.378  Sum_probs=55.1

Q ss_pred             CCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCC-----------CCchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           4 SQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQP-----------YGKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~-----------~~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      .|.+||.|||.+..+..+..   ..+-+||.-||+||.+....           .+++.|+||+||++|+|..|..||..
T Consensus       495 kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~  574 (677)
T KOG0596|consen  495 KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ  574 (677)
T ss_pred             eeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH
Confidence            47899999999988876643   34559999999999985422           45778999999999999999999975


Q ss_pred             C
Q psy8825          70 E   70 (92)
Q Consensus        70 ~   70 (92)
                      -
T Consensus       575 ~  575 (677)
T KOG0596|consen  575 I  575 (677)
T ss_pred             H
Confidence            4

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.42  E-value=7.1e-13  Score=76.94  Aligned_cols=70  Identities=29%  Similarity=0.536  Sum_probs=59.0

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      ++++.+++.|||.+.............|+..|++||.+.+..++.+.|+|++|++++++++|..||....
T Consensus       136 ~~~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~  205 (285)
T cd05630         136 DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK  205 (285)
T ss_pred             CCCCCEEEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC
Confidence            4567899999998866655555555689999999999988888889999999999999999999998643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.42  E-value=9.7e-13  Score=76.08  Aligned_cols=69  Identities=26%  Similarity=0.544  Sum_probs=57.7

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      +.++.+++.|||.+.............|+..|++||.+....++.+.|+|++|++++++++|..||.+.
T Consensus       129 ~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~  197 (277)
T cd05607         129 DDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDH  197 (277)
T ss_pred             cCCCCEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Confidence            456778999999887665544444567899999999998878889999999999999999999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.41  E-value=7.6e-13  Score=71.91  Aligned_cols=65  Identities=20%  Similarity=0.225  Sum_probs=51.3

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE   72 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~   72 (92)
                      +.++.+|+  ||.+......    ...|++.|++||++.+..++.+.|+|++|++++++++|..||.....
T Consensus        45 ~~~~~~~~--fG~~~~~~~~----~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~  109 (176)
T smart00750       45 TWDGLLKL--DGSVAFKTPE----QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERE  109 (176)
T ss_pred             cCccceee--ccceEeeccc----cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccch
Confidence            34556666  7776554332    23688999999999888899999999999999999999999976543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.40  E-value=2.5e-12  Score=74.37  Aligned_cols=88  Identities=19%  Similarity=0.355  Sum_probs=64.1

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCC---CHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGE---DEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~---~~~~~~~   77 (92)
                      +.++.++++|||.+..+... .....+|+..|++||.+... .++.+.|+|++|++++++++|..||.+.   .......
T Consensus       131 ~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~  209 (278)
T cd05606         131 DEHGHVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR  209 (278)
T ss_pred             CCCCCEEEccCcCccccCcc-CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHH
Confidence            46778999999988655332 33456789999999998643 5788899999999999999999999765   3344444


Q ss_pred             HHHhCCCcCCCCC
Q psy8825          78 AITDHSVSYPKMA   90 (92)
Q Consensus        78 ~i~~~~~~~p~~~   90 (92)
                      .+....+.+|..+
T Consensus       210 ~~~~~~~~~~~~~  222 (278)
T cd05606         210 MTLTMAVELPDSF  222 (278)
T ss_pred             HhhccCCCCCCcC
Confidence            4444455555443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.40  E-value=3.6e-12  Score=72.87  Aligned_cols=89  Identities=16%  Similarity=0.311  Sum_probs=66.3

Q ss_pred             CCCCccccCCCccccccCCCCC----CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG----SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~----~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~   76 (92)
                      .+++.+|+.|||.+........    .....++..|++||.+....++.+.|+|++|++++++++ |..||.+....+..
T Consensus       129 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~  208 (257)
T cd05116         129 VTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVT  208 (257)
T ss_pred             cCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            4566789999999876643321    122234578999999877778889999999999999997 99999988877777


Q ss_pred             HHHHhCC-CcCCCCC
Q psy8825          77 AAITDHS-VSYPKMA   90 (92)
Q Consensus        77 ~~i~~~~-~~~p~~~   90 (92)
                      ..+.++. ++.|..+
T Consensus       209 ~~i~~~~~~~~~~~~  223 (257)
T cd05116         209 QMIESGERMECPQRC  223 (257)
T ss_pred             HHHHCCCCCCCCCCC
Confidence            7777653 3444433

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>KOG0669|consensus

Probab=99.40  E-value=1e-12  Score=75.18  Aligned_cols=84  Identities=17%  Similarity=0.266  Sum_probs=70.9

Q ss_pred             CCCCccccCCCccccccCCC-----CCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-----RGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-----~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      ++++.+||+|||.++.++..     .++..++-|.+|.+||.+.+ ..|+...|+|..||++-+|+++.+-+++.....+
T Consensus       158 t~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqq  237 (376)
T KOG0669|consen  158 TKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQ  237 (376)
T ss_pred             cCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHH
Confidence            56899999999999887644     34666788999999999876 4689999999999999999999999999998888


Q ss_pred             HHHHHhCCCc
Q psy8825          76 FAAITDHSVS   85 (92)
Q Consensus        76 ~~~i~~~~~~   85 (92)
                      +..|...-..
T Consensus       238 l~~Is~LcGs  247 (376)
T KOG0669|consen  238 LHLISQLCGS  247 (376)
T ss_pred             HHHHHHHhcc
Confidence            8887764433

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.40  E-value=2.6e-12  Score=75.05  Aligned_cols=78  Identities=14%  Similarity=0.257  Sum_probs=59.0

Q ss_pred             CCCCccccCCCccccccCC-CCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCC-HHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRP-GRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGED-EEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~-~~~~~~~   78 (92)
                      +.++.+||.|||.+..... .......+++..|++||++.+ ..++...|+|++|++++++++|..||.+.. ..+.+.+
T Consensus       137 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~  216 (303)
T cd07869         137 SDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLER  216 (303)
T ss_pred             CCCCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHH
Confidence            4567899999998865432 233445678999999999865 346888999999999999999999998753 3344444


Q ss_pred             H
Q psy8825          79 I   79 (92)
Q Consensus        79 i   79 (92)
                      +
T Consensus       217 ~  217 (303)
T cd07869         217 I  217 (303)
T ss_pred             H
Confidence            3

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.40  E-value=2.5e-12  Score=73.57  Aligned_cols=88  Identities=27%  Similarity=0.555  Sum_probs=68.7

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCC--HHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED--EEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~--~~~~~~~i   79 (92)
                      +.++.+++.|||.+.............++..|++||.+....++.+.|+|++|++++++++|..||....  ..+.+..+
T Consensus       127 ~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  206 (262)
T cd05572         127 DSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDI  206 (262)
T ss_pred             cCCCCEEEeeCCcccccCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHH
Confidence            4577899999999877655444445678899999999877778888999999999999999999998766  66666666


Q ss_pred             H--hCCCcCCCC
Q psy8825          80 T--DHSVSYPKM   89 (92)
Q Consensus        80 ~--~~~~~~p~~   89 (92)
                      .  ...+.+|..
T Consensus       207 ~~~~~~~~~~~~  218 (262)
T cd05572         207 LKGNGKLEFPNY  218 (262)
T ss_pred             hccCCCCCCCcc
Confidence            6  344555544

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.39  E-value=2.7e-12  Score=77.60  Aligned_cols=70  Identities=17%  Similarity=0.259  Sum_probs=57.8

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      +.++.+++.|||.+.......   ......||..|++||.+....++.+.|+|++|++++++++|..||.+..
T Consensus       219 ~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~  291 (392)
T PHA03207        219 DEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQ  291 (392)
T ss_pred             cCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence            467789999999987654432   2234679999999999988888899999999999999999999997653

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.38  E-value=3.1e-12  Score=73.91  Aligned_cols=82  Identities=21%  Similarity=0.404  Sum_probs=64.5

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.++|.|||.+.......   ......++..|++||.+....++.+.|+|++|++++++++ |..||.+....+...
T Consensus       158 ~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~  237 (283)
T cd05048         158 GEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIE  237 (283)
T ss_pred             cCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            456788999999886553322   1223456788999999887788889999999999999997 999999888888877


Q ss_pred             HHHhCC
Q psy8825          78 AITDHS   83 (92)
Q Consensus        78 ~i~~~~   83 (92)
                      .+.+..
T Consensus       238 ~i~~~~  243 (283)
T cd05048         238 MIRSRQ  243 (283)
T ss_pred             HHHcCC
Confidence            776654

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0199|consensus

Probab=99.38  E-value=1.2e-12  Score=83.12  Aligned_cols=87  Identities=15%  Similarity=0.319  Sum_probs=71.2

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcC----CcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSA----YSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~----~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      ...+|+.|||+.+.+..+.......+.    ..|.+||.++...|+++.|+|.+|+.+|||++ |..||.|....+++++
T Consensus       248 prtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~  327 (1039)
T KOG0199|consen  248 PRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKN  327 (1039)
T ss_pred             cceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHh
Confidence            456899999999999877654444332    47899999999999999999999999999998 8899999999999999


Q ss_pred             HHhCC-CcCCCCC
Q psy8825          79 ITDHS-VSYPKMA   90 (92)
Q Consensus        79 i~~~~-~~~p~~~   90 (92)
                      |..+. .+-|+..
T Consensus       328 iD~~erLpRPk~c  340 (1039)
T KOG0199|consen  328 IDAGERLPRPKYC  340 (1039)
T ss_pred             ccccccCCCCCCC
Confidence            98543 4445443

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.38  E-value=5.8e-12  Score=73.46  Aligned_cols=81  Identities=20%  Similarity=0.344  Sum_probs=61.0

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+|+.|||.+..............+..|++||......++.+.|+|++|++++++++ |..||.+....+...++.
T Consensus       153 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~  232 (297)
T cd05089         153 GENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLP  232 (297)
T ss_pred             CCCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Confidence            4567889999998754322222222233457999999887778889999999999999997 999999888777776666


Q ss_pred             hC
Q psy8825          81 DH   82 (92)
Q Consensus        81 ~~   82 (92)
                      .+
T Consensus       233 ~~  234 (297)
T cd05089         233 QG  234 (297)
T ss_pred             cC
Confidence            54

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>KOG4257|consensus

Probab=99.37  E-value=2.1e-13  Score=85.70  Aligned_cols=88  Identities=16%  Similarity=0.317  Sum_probs=75.9

Q ss_pred             CccccCCCccccccCCCCCCCCCCc--CCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHh
Q psy8825           5 QPFRERTLSHQDKIRPGRGSNPRPS--AYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         5 ~~~~l~d~~~~~~~~~~~~~~~~~g--~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~i~~   81 (92)
                      .=+||.|||+++++....-++...|  -..||+||.++...|+...|+|-+|+.+||.+. |-.||.+..+.+++-+|+.
T Consensus       528 ~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEn  607 (974)
T KOG4257|consen  528 QCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIEN  607 (974)
T ss_pred             ceeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecC
Confidence            4579999999999987765544444  358999999999999999999999999999997 8999999999999999999


Q ss_pred             CC-CcCCCCCCC
Q psy8825          82 HS-VSYPKMAVF   92 (92)
Q Consensus        82 ~~-~~~p~~~~~   92 (92)
                      +. ++.|+..||
T Consensus       608 GeRlP~P~nCPp  619 (974)
T KOG4257|consen  608 GERLPCPPNCPP  619 (974)
T ss_pred             CCCCCCCCCCCh
Confidence            85 788888875

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.37  E-value=6.6e-12  Score=72.39  Aligned_cols=84  Identities=19%  Similarity=0.375  Sum_probs=64.9

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+||.|||.+.......   ......++..|++||.+.+..++.+.|+|++|++++++++ |..||.+.+..+...
T Consensus       156 ~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~  235 (280)
T cd05049         156 GYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIE  235 (280)
T ss_pred             cCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            456789999999886543322   1223345678999999988888889999999999999998 999998877777777


Q ss_pred             HHHhCCCc
Q psy8825          78 AITDHSVS   85 (92)
Q Consensus        78 ~i~~~~~~   85 (92)
                      .+..+...
T Consensus       236 ~~~~~~~~  243 (280)
T cd05049         236 CITQGRLL  243 (280)
T ss_pred             HHHcCCcC
Confidence            77765543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.37  E-value=4.8e-12  Score=74.16  Aligned_cols=79  Identities=18%  Similarity=0.299  Sum_probs=61.1

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+||.|||.+...... .......++..|++||.+.+ ..++.+.|+|++|++++++++|..||.+.+..+.+..+
T Consensus       138 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~  217 (309)
T cd07872         138 NERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLI  217 (309)
T ss_pred             CCCCCEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            45678999999988665332 23344578899999998765 45788999999999999999999999887765555444


Q ss_pred             H
Q psy8825          80 T   80 (92)
Q Consensus        80 ~   80 (92)
                      .
T Consensus       218 ~  218 (309)
T cd07872         218 F  218 (309)
T ss_pred             H
Confidence            4

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.36  E-value=7.2e-12  Score=72.73  Aligned_cols=82  Identities=18%  Similarity=0.350  Sum_probs=64.6

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+++.|||.+.......   ......++..|++||.+.+..++.+.|+|++|++++++++ |..||.+....+...
T Consensus       154 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~  233 (288)
T cd05093         154 GENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIE  233 (288)
T ss_pred             ccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            466789999999987654322   1223345678999999988888889999999999999998 899998887777777


Q ss_pred             HHHhCC
Q psy8825          78 AITDHS   83 (92)
Q Consensus        78 ~i~~~~   83 (92)
                      .+..+.
T Consensus       234 ~i~~~~  239 (288)
T cd05093         234 CITQGR  239 (288)
T ss_pred             HHHcCC
Confidence            777765

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.36  E-value=4.1e-12  Score=72.29  Aligned_cols=82  Identities=23%  Similarity=0.338  Sum_probs=66.1

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+++.|||.+....... ......|+..|++||......++.+.|+|++|++++++++|..||...+..+...++.
T Consensus       135 ~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  214 (256)
T cd08529         135 DAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKII  214 (256)
T ss_pred             eCCCCEEEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            456788999999887665432 2334578899999999887778889999999999999999999998888777777766


Q ss_pred             hCC
Q psy8825          81 DHS   83 (92)
Q Consensus        81 ~~~   83 (92)
                      +..
T Consensus       215 ~~~  217 (256)
T cd08529         215 RGV  217 (256)
T ss_pred             cCC
Confidence            654

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0665|consensus

Probab=99.36  E-value=5.8e-13  Score=77.73  Aligned_cols=84  Identities=17%  Similarity=0.245  Sum_probs=73.5

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      ..+..+|+.|||++..-...-..+-.+.|..|.|||++.+..+...+|+||+||++-+++.|..-|.|.++.++..+|.+
T Consensus       152 ~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~  231 (369)
T KOG0665|consen  152 NSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIE  231 (369)
T ss_pred             cchhheeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHH
Confidence            45678999999999887666555566889999999999988899999999999999999999999999999999999888


Q ss_pred             CCCc
Q psy8825          82 HSVS   85 (92)
Q Consensus        82 ~~~~   85 (92)
                      ....
T Consensus       232 ~lgt  235 (369)
T KOG0665|consen  232 QLGT  235 (369)
T ss_pred             HhcC
Confidence            6554

>KOG0608|consensus

Probab=99.35  E-value=3.6e-13  Score=84.85  Aligned_cols=55  Identities=33%  Similarity=0.627  Sum_probs=47.0

Q ss_pred             CCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825          26 PRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus        26 ~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      ..+||+-|++||++...+|+...|+|+.|+++++|+-|+.||....+-+.-.+|+
T Consensus       830 slvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~  884 (1034)
T KOG0608|consen  830 SLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVI  884 (1034)
T ss_pred             hhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeee
Confidence            3579999999999998999999999999999999999999998876544444443

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.35  E-value=2.7e-12  Score=75.34  Aligned_cols=68  Identities=19%  Similarity=0.344  Sum_probs=54.5

Q ss_pred             CCCccccCCCccccccCCC----CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           3 ESQPFRERTLSHQDKIRPG----RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~----~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      ..+.+|+.|||.+......    .......||..|+|||++.+. .++.+.|+|++|++++++++|..||.+.
T Consensus       147 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~  219 (317)
T cd07868         147 ERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             CcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence            4567999999998765432    223456789999999998764 5788899999999999999999999653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.35  E-value=4e-12  Score=75.29  Aligned_cols=71  Identities=20%  Similarity=0.367  Sum_probs=55.7

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDE   72 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~   72 (92)
                      +.++.+||.|||.+.......   ......++..|++||.+....++.+.|+|++|++++++++ |..||.+...
T Consensus       208 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~  282 (338)
T cd05102         208 SENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI  282 (338)
T ss_pred             cCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCc
Confidence            456789999999987653322   1223345678999999988888899999999999999997 9999987543

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.35  E-value=2.6e-13  Score=80.08  Aligned_cols=81  Identities=19%  Similarity=0.462  Sum_probs=64.3

Q ss_pred             CCCCccccCCCccccccCCCCC--CCCCCcCCcCccchhhc------cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG--SNPRPSAYSILLFQIIL------YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEE   73 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~--~~~~~g~~~~~~pe~~~------~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~   73 (92)
                      +.++.+||.|||.+..+.....  .....|+..|++||++.      ...++.+.|+|++|++++++++|..||.+....
T Consensus       136 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~  215 (330)
T cd05601         136 DRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA  215 (330)
T ss_pred             CCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH
Confidence            5678899999999877654332  23357899999999986      345678899999999999999999999988777


Q ss_pred             HHHHHHHhC
Q psy8825          74 ELFAAITDH   82 (92)
Q Consensus        74 ~~~~~i~~~   82 (92)
                      ..+..+.+.
T Consensus       216 ~~~~~i~~~  224 (330)
T cd05601         216 KTYNNIMNF  224 (330)
T ss_pred             HHHHHHHcC
Confidence            777776653

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.35  E-value=6.3e-12  Score=80.44  Aligned_cols=81  Identities=30%  Similarity=0.630  Sum_probs=63.5

Q ss_pred             ccCCCccccccCCC---CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Q psy8825           8 RERTLSHQDKIRPG---RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSV   84 (92)
Q Consensus         8 ~l~d~~~~~~~~~~---~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~~   84 (92)
                      ++.+|+.+......   ......+||+.|++||++.+..++.+.|+|++|++++++++|..||.+....+.+..+....+
T Consensus       518 ~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~  597 (669)
T cd05610         518 IGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDI  597 (669)
T ss_pred             ccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCC
Confidence            44566655443222   123345899999999999888899999999999999999999999999988888888877766


Q ss_pred             cCCC
Q psy8825          85 SYPK   88 (92)
Q Consensus        85 ~~p~   88 (92)
                      ++|.
T Consensus       598 ~~p~  601 (669)
T cd05610         598 PWPE  601 (669)
T ss_pred             CCCc
Confidence            6554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.35  E-value=5.9e-12  Score=71.75  Aligned_cols=82  Identities=17%  Similarity=0.246  Sum_probs=64.6

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+++.|||.+...... .......++..|++||......++.+.|+|++|++++++++|..||.+.+.......+.
T Consensus       136 ~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~  215 (257)
T cd08223         136 TRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRII  215 (257)
T ss_pred             ecCCcEEEecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence            45678899999988765432 23344578899999999888778888999999999999999999998877766665665


Q ss_pred             hCC
Q psy8825          81 DHS   83 (92)
Q Consensus        81 ~~~   83 (92)
                      .+.
T Consensus       216 ~~~  218 (257)
T cd08223         216 EGK  218 (257)
T ss_pred             hcC
Confidence            544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>KOG0662|consensus

Probab=99.34  E-value=1.6e-12  Score=71.28  Aligned_cols=83  Identities=14%  Similarity=0.217  Sum_probs=71.0

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccCC-CCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQP-YGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~-~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      ++.|.+|++|||+++.+.... +....+-|.+|.+|.++-+.. |+.+.|+||.||++.|+.. |.+.|.|.+-.+++.+
T Consensus       135 n~ngelkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkr  214 (292)
T KOG0662|consen  135 NRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKR  214 (292)
T ss_pred             ccCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHH
Confidence            567899999999999987654 666678899999999987655 7899999999999999996 8899999999999998


Q ss_pred             HHhCCC
Q psy8825          79 ITDHSV   84 (92)
Q Consensus        79 i~~~~~   84 (92)
                      |.....
T Consensus       215 if~~lg  220 (292)
T KOG0662|consen  215 IFRLLG  220 (292)
T ss_pred             HHHHhC
Confidence            877543

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.34  E-value=8.4e-12  Score=71.87  Aligned_cols=81  Identities=15%  Similarity=0.262  Sum_probs=64.5

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+++.|||.+...... .......++..|++||.+.+..++.+.|+|++|++++++++|..||.+.+.......+.
T Consensus       132 ~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~  211 (274)
T cd06609         132 SEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIP  211 (274)
T ss_pred             CCCCCEEEcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhh
Confidence            45678899999988776544 33445678889999999987778899999999999999999999998776655555555


Q ss_pred             hC
Q psy8825          81 DH   82 (92)
Q Consensus        81 ~~   82 (92)
                      ..
T Consensus       212 ~~  213 (274)
T cd06609         212 KN  213 (274)
T ss_pred             hc
Confidence            44

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.34  E-value=6.4e-12  Score=73.38  Aligned_cols=80  Identities=19%  Similarity=0.371  Sum_probs=63.5

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+++.|||.+...... ......+|+..|++||.+....++.+.|+|++|++++++++|..||......+.+..+.
T Consensus       151 ~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~  230 (297)
T cd06659         151 TLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR  230 (297)
T ss_pred             ccCCcEEEeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Confidence            46778999999988655433 22344678999999999987778889999999999999999999998777666655554


Q ss_pred             h
Q psy8825          81 D   81 (92)
Q Consensus        81 ~   81 (92)
                      .
T Consensus       231 ~  231 (297)
T cd06659         231 D  231 (297)
T ss_pred             c
Confidence            4

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.34  E-value=3.6e-12  Score=72.67  Aligned_cols=83  Identities=16%  Similarity=0.235  Sum_probs=66.5

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      ++++.+++.|||.+..+.... ......|+..|++||.+.+..++.+.|+|++|++++++++|..||.+.+.......+.
T Consensus       134 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~  213 (255)
T cd08219         134 TQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVC  213 (255)
T ss_pred             CCCCcEEEcccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHh
Confidence            456788999999987664432 2334578889999999988778889999999999999999999999888777766666


Q ss_pred             hCCC
Q psy8825          81 DHSV   84 (92)
Q Consensus        81 ~~~~   84 (92)
                      .+..
T Consensus       214 ~~~~  217 (255)
T cd08219         214 QGSY  217 (255)
T ss_pred             cCCC
Confidence            5543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.34  E-value=1.1e-11  Score=72.69  Aligned_cols=88  Identities=30%  Similarity=0.516  Sum_probs=67.6

Q ss_pred             CCCCccccCCCccccccCCCC------------------------------CCCCCCcCCcCccchhhccCCCCchhhHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR------------------------------GSNPRPSAYSILLFQIILYQPYGKSVDWW   51 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~------------------------------~~~~~~g~~~~~~pe~~~~~~~~~~~~~w   51 (92)
                      +.++.+++.|||.+.......                              ......|+..|++||.+.+..++.+.|+|
T Consensus       137 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~  216 (316)
T cd05574         137 HESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWW  216 (316)
T ss_pred             cCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHH
Confidence            456788899999765543221                              11234688899999999887788899999


Q ss_pred             hHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcCCCC
Q psy8825          52 AYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPKM   89 (92)
Q Consensus        52 s~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~~~~p~~   89 (92)
                      ++|++++++++|..||.+.+....+..+....+.+|..
T Consensus       217 slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  254 (316)
T cd05574         217 TLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGS  254 (316)
T ss_pred             HHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCc
Confidence            99999999999999999888777777777666655543

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.34  E-value=8.7e-12  Score=71.27  Aligned_cols=80  Identities=15%  Similarity=0.259  Sum_probs=61.6

Q ss_pred             CCCCccccCCCccccccCCCCC----CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG----SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~----~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~   77 (92)
                      +.++.+++.|||.+........    .....|+..|++||.+.+..++.+.|+|++|++++++++|..||.+.+......
T Consensus       138 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~  217 (263)
T cd06625         138 DSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIF  217 (263)
T ss_pred             cCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHH
Confidence            4567899999998866543221    133567889999999988778889999999999999999999998766655544


Q ss_pred             HHHh
Q psy8825          78 AITD   81 (92)
Q Consensus        78 ~i~~   81 (92)
                      .+..
T Consensus       218 ~~~~  221 (263)
T cd06625         218 KIAT  221 (263)
T ss_pred             HHhc
Confidence            4444

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.33  E-value=1.1e-11  Score=71.16  Aligned_cols=83  Identities=24%  Similarity=0.409  Sum_probs=66.8

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+++.|||.+.............|+..|++||......++.+.|+|++|++++++++|..||...+.......+..
T Consensus       148 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~  227 (269)
T cd08528         148 GEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVE  227 (269)
T ss_pred             CCCCcEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhh
Confidence            45678899999998766544444556788899999999877788899999999999999999999988777666666655


Q ss_pred             CCC
Q psy8825          82 HSV   84 (92)
Q Consensus        82 ~~~   84 (92)
                      ..+
T Consensus       228 ~~~  230 (269)
T cd08528         228 AVY  230 (269)
T ss_pred             ccC
Confidence            543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.33  E-value=8.4e-12  Score=72.75  Aligned_cols=80  Identities=20%  Similarity=0.377  Sum_probs=63.2

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+++.|||.+...... .......|+..|++||......++.+.|+|++|++++++++|..||.+.+....+..+.
T Consensus       152 ~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~  231 (292)
T cd06658         152 TSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIR  231 (292)
T ss_pred             cCCCCEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            45778999999987655333 22334578899999999887778889999999999999999999998877766655554


Q ss_pred             h
Q psy8825          81 D   81 (92)
Q Consensus        81 ~   81 (92)
                      .
T Consensus       232 ~  232 (292)
T cd06658         232 D  232 (292)
T ss_pred             h
Confidence            4

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG4250|consensus

Probab=99.33  E-value=9.7e-13  Score=82.87  Aligned_cols=63  Identities=21%  Similarity=0.355  Sum_probs=58.5

Q ss_pred             ccccCCCccccccCCCCCCCCCCcCCcCccchhhc-cCCCCchhhHHhHHHHHHHHHhCCCCCC
Q psy8825           6 PFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIIL-YQPYGKSVDWWAYGVLLYEMLVGQPPFD   68 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~-~~~~~~~~~~ws~g~~~~~~~~g~~p~~   68 (92)
                      -.||+|||.++-+..+....+++||..|.+|+... ...|+..+|.||+|+.+|+..+|..||-
T Consensus       162 IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~  225 (732)
T KOG4250|consen  162 IYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFI  225 (732)
T ss_pred             EEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCC
Confidence            57999999999999999999999999999999987 4678999999999999999999998884

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.33  E-value=2e-11  Score=70.65  Aligned_cols=82  Identities=20%  Similarity=0.386  Sum_probs=62.3

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+|+.|||.+.......   ......++..|++||...+..++.+.|+|++|++++++++ |..||.+........
T Consensus       143 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~  222 (279)
T cd05111         143 KSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPD  222 (279)
T ss_pred             cCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            456778999999987654332   1223456678999999887788899999999999999998 999998877666554


Q ss_pred             HHHhCC
Q psy8825          78 AITDHS   83 (92)
Q Consensus        78 ~i~~~~   83 (92)
                      .+..+.
T Consensus       223 ~~~~~~  228 (279)
T cd05111         223 LLEKGE  228 (279)
T ss_pred             HHHCCC
Confidence            444433

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.33  E-value=8.5e-12  Score=72.13  Aligned_cols=79  Identities=23%  Similarity=0.368  Sum_probs=62.3

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+|++|||.+.......  ......++..|++||.+... .++.+.|+|++|++++++++|..||.+....+.+..
T Consensus       134 ~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~  213 (288)
T cd07833         134 SESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYL  213 (288)
T ss_pred             CCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            467789999999887665443  34456788899999998777 678899999999999999999999987766555444


Q ss_pred             HH
Q psy8825          79 IT   80 (92)
Q Consensus        79 i~   80 (92)
                      +.
T Consensus       214 ~~  215 (288)
T cd07833         214 IQ  215 (288)
T ss_pred             HH
Confidence            43

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.33  E-value=1.5e-11  Score=70.27  Aligned_cols=83  Identities=22%  Similarity=0.446  Sum_probs=65.2

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+++.|||.+.....   .....++..|++||...+..++.+.|+|++|++++++++|..||...+.......+..
T Consensus       131 ~~~~~~~l~dfg~~~~~~~---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  207 (260)
T cd05611         131 DQTGHLKLTDFGLSRNGLE---NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILS  207 (260)
T ss_pred             CCCCcEEEeecccceeccc---cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            4567889999998765432   3345688899999998777778899999999999999999999998877777666665


Q ss_pred             CCCcCC
Q psy8825          82 HSVSYP   87 (92)
Q Consensus        82 ~~~~~p   87 (92)
                      ....++
T Consensus       208 ~~~~~~  213 (260)
T cd05611         208 RRINWP  213 (260)
T ss_pred             cccCCC
Confidence            554433

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.33  E-value=1e-11  Score=70.87  Aligned_cols=81  Identities=14%  Similarity=0.147  Sum_probs=62.7

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccC---CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQ---PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~---~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~   77 (92)
                      ++++.+++.|||.+....... ......++..|++||.....   .++...|+|++|++++++++|..||...+......
T Consensus       135 ~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~  214 (262)
T cd06613         135 TEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALF  214 (262)
T ss_pred             CCCCCEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            467789999999886654432 34456788899999998665   67888999999999999999999998776555554


Q ss_pred             HHHhC
Q psy8825          78 AITDH   82 (92)
Q Consensus        78 ~i~~~   82 (92)
                      .+...
T Consensus       215 ~~~~~  219 (262)
T cd06613         215 LISKS  219 (262)
T ss_pred             HHHhc
Confidence            44444

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.33  E-value=1.1e-11  Score=70.61  Aligned_cols=83  Identities=16%  Similarity=0.196  Sum_probs=66.6

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+|+.|||.+....... ......++..|++||...+..++.+.|+|++|++++++++|..||...+..+....+.
T Consensus       135 ~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~  214 (256)
T cd08221         135 TKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIV  214 (256)
T ss_pred             eCCCCEEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence            456789999999886664433 3445678999999999877777888999999999999999999998888777777776


Q ss_pred             hCCC
Q psy8825          81 DHSV   84 (92)
Q Consensus        81 ~~~~   84 (92)
                      .+.+
T Consensus       215 ~~~~  218 (256)
T cd08221         215 QGNY  218 (256)
T ss_pred             cCCC
Confidence            6544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.32  E-value=6.3e-12  Score=74.54  Aligned_cols=73  Identities=19%  Similarity=0.258  Sum_probs=58.7

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      +.++.+||.|||.+..... .......|+..|++||.+.+..++.+.|+|++|++++++++|..||......+.
T Consensus       138 ~~~~~~kL~Dfg~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~  210 (333)
T cd06650         138 NSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKEL  210 (333)
T ss_pred             cCCCCEEEeeCCcchhhhh-hccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHH
Confidence            4567899999998865532 233456789999999999888888899999999999999999999987654433

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0670|consensus

Probab=99.32  E-value=8.2e-14  Score=85.83  Aligned_cols=84  Identities=19%  Similarity=0.326  Sum_probs=71.3

Q ss_pred             ccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCc
Q psy8825           6 PFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVS   85 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~~~   85 (92)
                      .+||+|||.+.....+. .+..+-+.+|.+||++.+..|+...|+||+||.+||+-+|+..|.|....+.+........+
T Consensus       575 iLKLCDfGSA~~~~ene-itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk  653 (752)
T KOG0670|consen  575 ILKLCDFGSASFASENE-ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGK  653 (752)
T ss_pred             eeeeccCcccccccccc-ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCC
Confidence            68999999986554332 33345577999999999999999999999999999999999999999998888888888888


Q ss_pred             CCCCC
Q psy8825          86 YPKMA   90 (92)
Q Consensus        86 ~p~~~   90 (92)
                      ||..|
T Consensus       654 ~p~Km  658 (752)
T KOG0670|consen  654 FPNKM  658 (752)
T ss_pred             CcHHH
Confidence            88754

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.32  E-value=2.1e-11  Score=69.90  Aligned_cols=81  Identities=19%  Similarity=0.365  Sum_probs=62.0

Q ss_pred             CCCCccccCCCccccccCCCCCC--CCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGS--NPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~--~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+|+.|||.+.........  ....++..|++||.+.+..++.+.|+|++|++++++++ |..||.+.+..+....
T Consensus       138 ~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~  217 (263)
T cd05052         138 GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL  217 (263)
T ss_pred             cCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence            46778999999988766443211  11223557999999888888889999999999999998 8999988877777666


Q ss_pred             HHhC
Q psy8825          79 ITDH   82 (92)
Q Consensus        79 i~~~   82 (92)
                      +...
T Consensus       218 ~~~~  221 (263)
T cd05052         218 LEKG  221 (263)
T ss_pred             HHCC
Confidence            6553

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.32  E-value=1e-11  Score=71.61  Aligned_cols=76  Identities=22%  Similarity=0.275  Sum_probs=60.1

Q ss_pred             CccccCCCccccccCCCCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           5 QPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         5 ~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.+|+.|||.+.............++..|++||.+.. ..++.+.|+|++|++++++++|..||.+.+..+....+.
T Consensus       136 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~  212 (282)
T cd07831         136 DILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIH  212 (282)
T ss_pred             CCeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHH
Confidence            6789999999877655544455678899999997654 345788999999999999999999999887666555444

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.32  E-value=1.1e-11  Score=71.74  Aligned_cols=83  Identities=18%  Similarity=0.348  Sum_probs=64.6

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      ..++.+|+.|||.+.......   ......++..|++||.+....++.+.|+|++|++++++++ |..||.+....+...
T Consensus       158 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~  237 (283)
T cd05091         158 FDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIE  237 (283)
T ss_pred             cCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            356679999999876653322   1223455678999999887778889999999999999997 888998888878877


Q ss_pred             HHHhCCC
Q psy8825          78 AITDHSV   84 (92)
Q Consensus        78 ~i~~~~~   84 (92)
                      .+.....
T Consensus       238 ~i~~~~~  244 (283)
T cd05091         238 MIRNRQV  244 (283)
T ss_pred             HHHcCCc
Confidence            7777653

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.32  E-value=1.5e-11  Score=71.20  Aligned_cols=82  Identities=20%  Similarity=0.403  Sum_probs=63.3

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.+..+|+.|||.+.......   ......++..|++||.+.+..++.+.|+|++|++++++++ |..||.+....++..
T Consensus       158 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~  237 (283)
T cd05090         158 GEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIE  237 (283)
T ss_pred             cCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            456778999999987654332   2233455677999999887778899999999999999998 989998877777666


Q ss_pred             HHHhCC
Q psy8825          78 AITDHS   83 (92)
Q Consensus        78 ~i~~~~   83 (92)
                      .+....
T Consensus       238 ~~~~~~  243 (283)
T cd05090         238 MVRKRQ  243 (283)
T ss_pred             HHHcCC
Confidence            665543

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.32  E-value=9.1e-12  Score=71.93  Aligned_cols=80  Identities=16%  Similarity=0.255  Sum_probs=64.7

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+++.|||.+.............++..|++||.+.+..++.+.|+|++|++++++++|.+||.+....+.+.++.+
T Consensus       141 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~  220 (287)
T cd07838         141 TSDGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFD  220 (287)
T ss_pred             ccCCCEEEeccCcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHH
Confidence            45678999999988776554444445678889999999887788889999999999999999999998877776666654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0196|consensus

Probab=99.32  E-value=5.8e-13  Score=85.01  Aligned_cols=84  Identities=14%  Similarity=0.335  Sum_probs=68.4

Q ss_pred             CCccccCCCccccccCCCC--CCCCCCcC--CcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           4 SQPFRERTLSHQDKIRPGR--GSNPRPSA--YSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~--~~~~~~g~--~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      .=..|++|||+++.+..+.  ...+..|-  .+|.|||.+.+.+|....|+||+|+++||..+ |..||....+++++..
T Consensus       767 nLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIka  846 (996)
T KOG0196|consen  767 NLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKA  846 (996)
T ss_pred             ceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHH
Confidence            3367999999999885543  33344443  58999999999999999999999999999987 9999999999999999


Q ss_pred             HHhCCCcCCC
Q psy8825          79 ITDHSVSYPK   88 (92)
Q Consensus        79 i~~~~~~~p~   88 (92)
                      |+++ |++|.
T Consensus       847 Ie~g-yRLPp  855 (996)
T KOG0196|consen  847 IEQG-YRLPP  855 (996)
T ss_pred             HHhc-cCCCC
Confidence            8775 44443

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.31  E-value=2.2e-11  Score=69.90  Aligned_cols=80  Identities=16%  Similarity=0.276  Sum_probs=61.8

Q ss_pred             CCCCccccCCCccccccCCC----CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG----RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~----~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~   77 (92)
                      +.++.+++.|||.+......    .......|+..|++||.+.+..++.+.|+|++|++++++++|..||..........
T Consensus       140 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~  219 (264)
T cd06653         140 DSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIF  219 (264)
T ss_pred             cCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHH
Confidence            35667899999988765432    12234568889999999887778888999999999999999999998876655555


Q ss_pred             HHHh
Q psy8825          78 AITD   81 (92)
Q Consensus        78 ~i~~   81 (92)
                      .+..
T Consensus       220 ~~~~  223 (264)
T cd06653         220 KIAT  223 (264)
T ss_pred             HHHc
Confidence            5443

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.31  E-value=9.2e-12  Score=71.90  Aligned_cols=70  Identities=26%  Similarity=0.480  Sum_probs=57.3

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      +.++.+++.|||.+.............++..|++||...+..++.+.|+|++|++++++++|..||....
T Consensus       129 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  198 (277)
T cd05577         129 DDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRK  198 (277)
T ss_pred             CCCCCEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCc
Confidence            4567899999998866554444445677889999999877778888999999999999999999997654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.31  E-value=8.7e-12  Score=72.96  Aligned_cols=81  Identities=21%  Similarity=0.355  Sum_probs=60.3

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~i~   80 (92)
                      ++++.+|+.|||.+.............++..|++||......++.+.|+|++|++++++++ |..||.+.+..+....+.
T Consensus       158 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~  237 (303)
T cd05088         158 GENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP  237 (303)
T ss_pred             cCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHh
Confidence            5677899999998754322222222234567999999877778888999999999999998 999998877766666554


Q ss_pred             hC
Q psy8825          81 DH   82 (92)
Q Consensus        81 ~~   82 (92)
                      ..
T Consensus       238 ~~  239 (303)
T cd05088         238 QG  239 (303)
T ss_pred             cC
Confidence            43

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG0607|consensus

Probab=99.31  E-value=9.7e-12  Score=73.22  Aligned_cols=86  Identities=24%  Similarity=0.453  Sum_probs=65.5

Q ss_pred             CCCccccCCCccccccC--CCC------CCCCCCcCCcCccchhhc---c--CCCCchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           3 ESQPFRERTLSHQDKIR--PGR------GSNPRPSAYSILLFQIIL---Y--QPYGKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~--~~~------~~~~~~g~~~~~~pe~~~---~--~~~~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      +-+++|+.||-+...+.  ...      ...+.+|+..|||||++.   +  .-|+...|.||+|+++|-|++|.+||.|
T Consensus       214 ~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG  293 (463)
T KOG0607|consen  214 KVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVG  293 (463)
T ss_pred             CcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccC
Confidence            34688999886544433  221      234568999999999863   2  2468889999999999999999999987


Q ss_pred             CC---------------HHHHHHHHHhCCCcCCC
Q psy8825          70 ED---------------EEELFAAITDHSVSYPK   88 (92)
Q Consensus        70 ~~---------------~~~~~~~i~~~~~~~p~   88 (92)
                      ..               ...++..|-++.|.||+
T Consensus       294 ~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPd  327 (463)
T KOG0607|consen  294 HCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPD  327 (463)
T ss_pred             ccCCcCCccCCCccHHHHHHHHHHHhccCCcCCh
Confidence            52               35678888899999986

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.31  E-value=2.6e-11  Score=68.85  Aligned_cols=89  Identities=30%  Similarity=0.630  Sum_probs=70.9

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+++.|||.+...... .......++..|++||.......+.+.|+|++|++++++++|..||...+.......+.
T Consensus       127 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~  206 (250)
T cd05123         127 DADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKIL  206 (250)
T ss_pred             cCCCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence            45678899999987665443 23445678889999999877777888999999999999999999998888777777777


Q ss_pred             hCCCcCCCCC
Q psy8825          81 DHSVSYPKMA   90 (92)
Q Consensus        81 ~~~~~~p~~~   90 (92)
                      +....+|..+
T Consensus       207 ~~~~~~~~~~  216 (250)
T cd05123         207 KDPLRFPEFL  216 (250)
T ss_pred             cCCCCCCCCC
Confidence            7777766654

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.31  E-value=1.1e-11  Score=70.79  Aligned_cols=89  Identities=24%  Similarity=0.455  Sum_probs=67.3

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCC---HHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED---EEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~---~~~~~~~   78 (92)
                      ++++.+++.|||.+.............|+..|++||.+....++.+.|+|++|++++++++|..||...+   .......
T Consensus       134 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~  213 (258)
T cd05578         134 DEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAK  213 (258)
T ss_pred             cCCCCEEEeecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHH
Confidence            4677899999998877655544555678889999999887778888999999999999999999998766   3444444


Q ss_pred             HHhCCCcCCCCC
Q psy8825          79 ITDHSVSYPKMA   90 (92)
Q Consensus        79 i~~~~~~~p~~~   90 (92)
                      +......+|..+
T Consensus       214 ~~~~~~~~~~~~  225 (258)
T cd05578         214 QETADVLYPATW  225 (258)
T ss_pred             hccccccCcccC
Confidence            333444555443

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.30  E-value=1.8e-11  Score=69.85  Aligned_cols=79  Identities=11%  Similarity=0.280  Sum_probs=61.4

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+|+.|||.+.......  ....++..|++||.+....++.+.|+|++|++++++++ |..||...+..+....+.
T Consensus       136 ~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~  213 (256)
T cd05082         136 SEDNVAKVSDFGLTKEASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE  213 (256)
T ss_pred             cCCCcEEecCCccceeccccC--CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh
Confidence            467789999999886543322  23344567999999888788889999999999999997 899998877766666665


Q ss_pred             hC
Q psy8825          81 DH   82 (92)
Q Consensus        81 ~~   82 (92)
                      ++
T Consensus       214 ~~  215 (256)
T cd05082         214 KG  215 (256)
T ss_pred             cC
Confidence            54

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.30  E-value=2.8e-11  Score=70.65  Aligned_cols=79  Identities=20%  Similarity=0.413  Sum_probs=62.4

Q ss_pred             CCCCccccCCCccccccCCCCC-CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG-SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~-~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+++.|||.+..+..... .....++..|++||.+....++.+.|+|++|++++++++|..||.+.+.......+.
T Consensus       149 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~  228 (296)
T cd06655         149 GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA  228 (296)
T ss_pred             CCCCCEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            4677899999998876654432 234578889999999887778889999999999999999999998877655544443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.30  E-value=2.9e-11  Score=70.28  Aligned_cols=83  Identities=18%  Similarity=0.358  Sum_probs=64.1

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+++.|||.+.......   ......++..|++||.+.+..++.+.|+|++|++++++++ |..||...+..+.+.
T Consensus       157 ~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~  236 (291)
T cd05094         157 GANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE  236 (291)
T ss_pred             ccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            456789999999886554322   1233456788999999888888889999999999999998 999998877766666


Q ss_pred             HHHhCCC
Q psy8825          78 AITDHSV   84 (92)
Q Consensus        78 ~i~~~~~   84 (92)
                      .+..+..
T Consensus       237 ~~~~~~~  243 (291)
T cd05094         237 CITQGRV  243 (291)
T ss_pred             HHhCCCC
Confidence            6665543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.30  E-value=2.9e-11  Score=69.35  Aligned_cols=80  Identities=16%  Similarity=0.288  Sum_probs=61.2

Q ss_pred             CCCCccccCCCccccccCCC----CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG----RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~----~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~   77 (92)
                      +.++.+++.|||.+......    .......|+..|++||.+.+..++...|+|++|++++++++|..||...+....+.
T Consensus       140 ~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~  219 (265)
T cd06652         140 DSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIF  219 (265)
T ss_pred             cCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHH
Confidence            45678899999988765432    12234568889999999887778888999999999999999999998765555544


Q ss_pred             HHHh
Q psy8825          78 AITD   81 (92)
Q Consensus        78 ~i~~   81 (92)
                      .+..
T Consensus       220 ~~~~  223 (265)
T cd06652         220 KIAT  223 (265)
T ss_pred             HHhc
Confidence            4443

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.30  E-value=1.9e-11  Score=70.32  Aligned_cols=81  Identities=21%  Similarity=0.355  Sum_probs=60.0

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~i~   80 (92)
                      ++++.+|+.|||.+..............+..|++||.+....++.+.|+|++|++++++++ |..||.+.+..+....+.
T Consensus       146 ~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~  225 (270)
T cd05047         146 GENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP  225 (270)
T ss_pred             cCCCeEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHh
Confidence            4567889999998753322212222233557999999887788889999999999999997 999998877766666665


Q ss_pred             hC
Q psy8825          81 DH   82 (92)
Q Consensus        81 ~~   82 (92)
                      ..
T Consensus       226 ~~  227 (270)
T cd05047         226 QG  227 (270)
T ss_pred             CC
Confidence            53

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.30  E-value=2.2e-11  Score=69.42  Aligned_cols=82  Identities=15%  Similarity=0.282  Sum_probs=65.6

Q ss_pred             CCCCccccCCCccccccCCCCC-CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG-SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~-~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+|+.|||.+........ .....++..|++||.+....++.+.|+|++|++++++++|..||...+..+....+.
T Consensus       144 ~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~  223 (265)
T cd08217         144 DANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIK  223 (265)
T ss_pred             ecCCCEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHh
Confidence            3567899999998877654433 445578999999999887778888999999999999999999998877666666665


Q ss_pred             hCC
Q psy8825          81 DHS   83 (92)
Q Consensus        81 ~~~   83 (92)
                      ...
T Consensus       224 ~~~  226 (265)
T cd08217         224 EGK  226 (265)
T ss_pred             cCC
Confidence            544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.30  E-value=7.3e-12  Score=73.41  Aligned_cols=68  Identities=19%  Similarity=0.336  Sum_probs=54.2

Q ss_pred             CCCccccCCCccccccCCCC----CCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           3 ESQPFRERTLSHQDKIRPGR----GSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~----~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      .++.+||.|||.+.......    ......|+..|++||.+.+. .++.+.|+|++|++++++++|.+||...
T Consensus       147 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~  219 (317)
T cd07867         147 ERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             CCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence            45689999999987664332    23345789999999998664 4688899999999999999999999753

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.30  E-value=2.4e-11  Score=70.97  Aligned_cols=80  Identities=21%  Similarity=0.310  Sum_probs=60.9

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+++.|||.+...... .......++..|++||.+.+. .++.+.|+|++|++++++++|.+||.+.+..+....+
T Consensus       138 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~  217 (301)
T cd07873         138 NERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFI  217 (301)
T ss_pred             CCCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            45678999999988654332 233445678899999987653 4678899999999999999999999988766555444


Q ss_pred             Hh
Q psy8825          80 TD   81 (92)
Q Consensus        80 ~~   81 (92)
                      ..
T Consensus       218 ~~  219 (301)
T cd07873         218 FR  219 (301)
T ss_pred             HH
Confidence            43

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.30  E-value=1.9e-11  Score=76.09  Aligned_cols=67  Identities=15%  Similarity=0.151  Sum_probs=54.5

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCC-CCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQP-PFD   68 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~-p~~   68 (92)
                      +.++.+||.|||.+..+....  .....+|+..|++||++.+..++.+.|+|++|+++++++++.. |+.
T Consensus       301 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~  370 (501)
T PHA03210        301 NCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIG  370 (501)
T ss_pred             CCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCcc
Confidence            567889999999987664432  2334689999999999988889999999999999999998764 443

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.29  E-value=3.5e-11  Score=69.44  Aligned_cols=82  Identities=13%  Similarity=0.259  Sum_probs=62.7

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+++.|||.+........   .....++..|++||.+....++...|+|++|++++++++ +..||.+.+..+...
T Consensus       153 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~  232 (277)
T cd05062         153 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLR  232 (277)
T ss_pred             cCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            4577899999998865543221   122345678999999887778889999999999999998 788998887777766


Q ss_pred             HHHhCC
Q psy8825          78 AITDHS   83 (92)
Q Consensus        78 ~i~~~~   83 (92)
                      .+....
T Consensus       233 ~~~~~~  238 (277)
T cd05062         233 FVMEGG  238 (277)
T ss_pred             HHHcCC
Confidence            665544

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.29  E-value=5e-11  Score=68.51  Aligned_cols=82  Identities=18%  Similarity=0.372  Sum_probs=63.3

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      ++++.+++.|||.+........   .....++..|++||......++.+.|+|++|++++++++ |..||.+....+...
T Consensus       146 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~  225 (272)
T cd05075         146 NENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYD  225 (272)
T ss_pred             cCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            4677899999999876643321   122345678999999888888899999999999999998 889998877766666


Q ss_pred             HHHhCC
Q psy8825          78 AITDHS   83 (92)
Q Consensus        78 ~i~~~~   83 (92)
                      .+..+.
T Consensus       226 ~~~~~~  231 (272)
T cd05075         226 YLRQGN  231 (272)
T ss_pred             HHHcCC
Confidence            666543

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.29  E-value=1.4e-11  Score=71.36  Aligned_cols=70  Identities=14%  Similarity=0.238  Sum_probs=56.2

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccC---CCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQ---PYGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~---~~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      +.++.+++.|||.+.............|+..|++||.+...   .++.+.|+|++|++++++++|..||....
T Consensus       142 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~  214 (288)
T cd06616         142 DRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN  214 (288)
T ss_pred             ccCCcEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc
Confidence            45677899999988766544444445788899999998765   57888999999999999999999997654

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.29  E-value=2.9e-11  Score=70.77  Aligned_cols=86  Identities=30%  Similarity=0.523  Sum_probs=64.9

Q ss_pred             CCCCccccCCCccccccCCC----------------CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPG----------------RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQP   65 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~----------------~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~   65 (92)
                      +.++.+++.|||.+......                .......++..|++||.+....++.+.|+|++|++++++++|..
T Consensus       135 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~  214 (305)
T cd05609         135 TSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCV  214 (305)
T ss_pred             CCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCC
Confidence            45678899999987531110                01123467888999999887778899999999999999999999


Q ss_pred             CCCCCCHHHHHHHHHhCCCcCC
Q psy8825          66 PFDGEDEEELFAAITDHSVSYP   87 (92)
Q Consensus        66 p~~~~~~~~~~~~i~~~~~~~p   87 (92)
                      ||.+....+...++.......|
T Consensus       215 pf~~~~~~~~~~~~~~~~~~~~  236 (305)
T cd05609         215 PFFGDTPEELFGQVISDDIEWP  236 (305)
T ss_pred             CCCCCCHHHHHHHHHhcccCCC
Confidence            9998888777777776654433

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.29  E-value=2.4e-11  Score=70.58  Aligned_cols=81  Identities=20%  Similarity=0.366  Sum_probs=63.9

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+++.|||.+....... ......|+..|++||......++.+.|+|++|++++++++|..||.+.+......++.
T Consensus       149 ~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~  228 (285)
T cd06648         149 TSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIR  228 (285)
T ss_pred             cCCCcEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHH
Confidence            456789999999876554332 2334578899999999877778888999999999999999999998877766666666


Q ss_pred             hC
Q psy8825          81 DH   82 (92)
Q Consensus        81 ~~   82 (92)
                      ..
T Consensus       229 ~~  230 (285)
T cd06648         229 DN  230 (285)
T ss_pred             hc
Confidence            55

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.29  E-value=4e-11  Score=68.99  Aligned_cols=89  Identities=25%  Similarity=0.449  Sum_probs=70.0

Q ss_pred             CCCCccccCCCccccccCCCC---------------------CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---------------------GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEM   60 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---------------------~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~   60 (92)
                      +.++.+++.|||.+.......                     ......++..|++||.......+.+.|+|++|++++++
T Consensus       136 ~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l  215 (280)
T cd05581         136 DKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQM  215 (280)
T ss_pred             CCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHH
Confidence            456789999999876654322                     22334678899999998777778889999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHhCCCcCCCCC
Q psy8825          61 LVGQPPFDGEDEEELFAAITDHSVSYPKMA   90 (92)
Q Consensus        61 ~~g~~p~~~~~~~~~~~~i~~~~~~~p~~~   90 (92)
                      ++|..||........+..+......+|..+
T Consensus       216 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  245 (280)
T cd05581         216 LTGKPPFRGSNEYLTFQKILKLEYSFPPNF  245 (280)
T ss_pred             HhCCCCCCCccHHHHHHHHHhcCCCCCCcc
Confidence            999999998877777777777777776654

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.28  E-value=3.2e-11  Score=69.81  Aligned_cols=81  Identities=20%  Similarity=0.361  Sum_probs=61.6

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      ++++.+||.|||.+........   .....++..|++||.+.+..++.+.|+|++|++++++++ |..||......+...
T Consensus       156 ~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~  235 (280)
T cd05092         156 GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIE  235 (280)
T ss_pred             cCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHH
Confidence            4567899999998865533221   122345678999999888888889999999999999998 899998877766666


Q ss_pred             HHHhC
Q psy8825          78 AITDH   82 (92)
Q Consensus        78 ~i~~~   82 (92)
                      .+...
T Consensus       236 ~~~~~  240 (280)
T cd05092         236 CITQG  240 (280)
T ss_pred             HHHcC
Confidence            66554

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.28  E-value=4.1e-11  Score=68.17  Aligned_cols=81  Identities=19%  Similarity=0.361  Sum_probs=64.7

Q ss_pred             CCCCccccCCCccccccCCC---CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG---RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~---~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+++.|||.+......   .......++..|++||.+....++.+.|+|++|++++++++ |..||.+....+...
T Consensus       139 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~  218 (262)
T cd00192         139 GEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLE  218 (262)
T ss_pred             CCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            45678999999998776543   22334567889999999887778889999999999999998 699999887777777


Q ss_pred             HHHhC
Q psy8825          78 AITDH   82 (92)
Q Consensus        78 ~i~~~   82 (92)
                      .+...
T Consensus       219 ~~~~~  223 (262)
T cd00192         219 YLRKG  223 (262)
T ss_pred             HHHcC
Confidence            76653

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.28  E-value=2.8e-11  Score=68.93  Aligned_cols=80  Identities=16%  Similarity=0.236  Sum_probs=63.0

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQP-YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~-~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+|+.|||.+.............|+..|++||.+.... ++.+.|+|++|++++++++|..||..........++.
T Consensus       136 ~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~  215 (258)
T cd06632         136 DTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIG  215 (258)
T ss_pred             CCCCCEEEccCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHH
Confidence            467789999999887765544445667889999999987665 7888999999999999999999997766555544444


Q ss_pred             h
Q psy8825          81 D   81 (92)
Q Consensus        81 ~   81 (92)
                      .
T Consensus       216 ~  216 (258)
T cd06632         216 R  216 (258)
T ss_pred             h
Confidence            3

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG0200|consensus

Probab=99.28  E-value=1.6e-11  Score=77.91  Aligned_cols=89  Identities=15%  Similarity=0.331  Sum_probs=66.5

Q ss_pred             CCCCccccCCCccccccCCCCCCC--CCCc--CCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCC-HHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSN--PRPS--AYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGED-EEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~--~~~g--~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~-~~~~   75 (92)
                      ++...+|++|||+++.........  ...+  -..|||||.+....|+.+.|+||+|+++||+++ |..||.+.. ..++
T Consensus       452 ~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l  531 (609)
T KOG0200|consen  452 TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEEL  531 (609)
T ss_pred             cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHH
Confidence            455688999999998655443322  1122  236999999999889999999999999999998 889999865 6666


Q ss_pred             HHHHHhCC-CcCCCCC
Q psy8825          76 FAAITDHS-VSYPKMA   90 (92)
Q Consensus        76 ~~~i~~~~-~~~p~~~   90 (92)
                      +..+.++. ...|.+.
T Consensus       532 ~~~l~~G~r~~~P~~c  547 (609)
T KOG0200|consen  532 LEFLKEGNRMEQPEHC  547 (609)
T ss_pred             HHHHhcCCCCCCCCCC
Confidence            76676664 3556554

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.28  E-value=3.5e-11  Score=70.25  Aligned_cols=75  Identities=20%  Similarity=0.427  Sum_probs=59.8

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~   76 (92)
                      +.++.+++.|||.+....... ......|+..|++||.+....++.+.|+|++|++++++++|..||.........
T Consensus       150 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~  225 (296)
T cd06654         150 GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL  225 (296)
T ss_pred             cCCCCEEECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH
Confidence            467789999999887654432 233457889999999988777788999999999999999999999877654443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.28  E-value=1.1e-11  Score=74.62  Aligned_cols=80  Identities=18%  Similarity=0.305  Sum_probs=58.4

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+||.|||.+........   ..+..++..|++||++....++.+.|+|++|++++++++ |..||.+......+.
T Consensus       246 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~  325 (374)
T cd05106         246 TDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFY  325 (374)
T ss_pred             eCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHH
Confidence            4566789999999866543321   112234567999999887788999999999999999997 999998765444443


Q ss_pred             HHHh
Q psy8825          78 AITD   81 (92)
Q Consensus        78 ~i~~   81 (92)
                      .+..
T Consensus       326 ~~~~  329 (374)
T cd05106         326 KMVK  329 (374)
T ss_pred             HHHH
Confidence            4433

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.28  E-value=2e-11  Score=70.07  Aligned_cols=78  Identities=13%  Similarity=0.130  Sum_probs=57.3

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhc---cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIIL---YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~---~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~   77 (92)
                      +.++.+++.|||.+..+... .......|+..|++||.+.   ...++.+.|+|++|+++++++++..||..........
T Consensus       140 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~  219 (267)
T cd06645         140 TDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF  219 (267)
T ss_pred             CCCCCEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHH
Confidence            35677899999987655432 2233457899999999874   3446788999999999999999999987655444333


Q ss_pred             HH
Q psy8825          78 AI   79 (92)
Q Consensus        78 ~i   79 (92)
                      .+
T Consensus       220 ~~  221 (267)
T cd06645         220 LM  221 (267)
T ss_pred             hh
Confidence            33

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.28  E-value=4.5e-11  Score=68.47  Aligned_cols=82  Identities=13%  Similarity=0.286  Sum_probs=61.4

Q ss_pred             CCCCccccCCCccccccCCCCC----CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG----SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~----~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~   76 (92)
                      +.++.+|+.|||.+........    .....++..|++||.+....++.+.|+|++|++++++++ |..||.+....+..
T Consensus       129 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~  208 (257)
T cd05115         129 VNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVM  208 (257)
T ss_pred             cCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHH
Confidence            4567789999998875543321    111123467999999887778889999999999999996 99999988777776


Q ss_pred             HHHHhCC
Q psy8825          77 AAITDHS   83 (92)
Q Consensus        77 ~~i~~~~   83 (92)
                      ..+.++.
T Consensus       209 ~~~~~~~  215 (257)
T cd05115         209 SFIEQGK  215 (257)
T ss_pred             HHHHCCC
Confidence            6666543

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.28  E-value=3.6e-11  Score=69.07  Aligned_cols=79  Identities=16%  Similarity=0.214  Sum_probs=59.2

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhcc-----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILY-----QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~-----~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      ++++.+++.|||.+...... .......|+..|++||.+..     ..++...|+|++|++++++++|..||........
T Consensus       145 ~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~  224 (272)
T cd06637         145 TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA  224 (272)
T ss_pred             CCCCCEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHH
Confidence            45678999999998665432 23445678999999998752     3467789999999999999999999976655444


Q ss_pred             HHHHH
Q psy8825          76 FAAIT   80 (92)
Q Consensus        76 ~~~i~   80 (92)
                      ...+.
T Consensus       225 ~~~~~  229 (272)
T cd06637         225 LFLIP  229 (272)
T ss_pred             HHHHh
Confidence            44333

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.28  E-value=3.7e-11  Score=70.40  Aligned_cols=80  Identities=19%  Similarity=0.290  Sum_probs=62.2

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+||.|||.+....... ......++..|++||.+.+ ..++.+.|+|++|++++++++|..||.+.+..+.+..+
T Consensus       142 ~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~  221 (309)
T cd07845         142 TDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLI  221 (309)
T ss_pred             CCCCCEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            456789999999887664432 2223345778999998765 45688899999999999999999999988887777666


Q ss_pred             Hh
Q psy8825          80 TD   81 (92)
Q Consensus        80 ~~   81 (92)
                      ..
T Consensus       222 ~~  223 (309)
T cd07845         222 IQ  223 (309)
T ss_pred             HH
Confidence            55

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.27  E-value=4.7e-11  Score=68.36  Aligned_cols=81  Identities=17%  Similarity=0.339  Sum_probs=62.0

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+++.|||.+.......  ......++..|++||...+..++.+.|+|++|++++++++ |..||.+....+....
T Consensus       136 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~  215 (260)
T cd05069         136 GDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQ  215 (260)
T ss_pred             cCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            466789999999886653332  1122345567999999887778889999999999999998 8999998877776666


Q ss_pred             HHhC
Q psy8825          79 ITDH   82 (92)
Q Consensus        79 i~~~   82 (92)
                      +...
T Consensus       216 ~~~~  219 (260)
T cd05069         216 VERG  219 (260)
T ss_pred             HHcC
Confidence            6554

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.27  E-value=5.6e-11  Score=68.13  Aligned_cols=80  Identities=16%  Similarity=0.314  Sum_probs=61.3

Q ss_pred             CCCCccccCCCccccccCCCC-------CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-------GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE   74 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-------~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~   74 (92)
                      +.++.+++.|||.+.......       ......|+..|++||.+....++...|+|++|++++++++|..||.+.+...
T Consensus       140 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~  219 (267)
T cd06628         140 DNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ  219 (267)
T ss_pred             cCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH
Confidence            456788999999877664221       1123467889999999887778888999999999999999999998876655


Q ss_pred             HHHHHHh
Q psy8825          75 LFAAITD   81 (92)
Q Consensus        75 ~~~~i~~   81 (92)
                      .+..+..
T Consensus       220 ~~~~~~~  226 (267)
T cd06628         220 AIFKIGE  226 (267)
T ss_pred             HHHHHhc
Confidence            5555444

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.27  E-value=3.5e-11  Score=69.30  Aligned_cols=81  Identities=17%  Similarity=0.309  Sum_probs=63.0

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      ++++.+|+.|||.+.......   ......++..|++||.+....++.+.|+|++|++++++++ |..||.+.+..+...
T Consensus       153 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~  232 (277)
T cd05032         153 AEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLK  232 (277)
T ss_pred             cCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHH
Confidence            467789999999887654332   2233456778999999877778888999999999999998 899998877777666


Q ss_pred             HHHhC
Q psy8825          78 AITDH   82 (92)
Q Consensus        78 ~i~~~   82 (92)
                      .+...
T Consensus       233 ~~~~~  237 (277)
T cd05032         233 FVIDG  237 (277)
T ss_pred             HHhcC
Confidence            66543

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.27  E-value=5.4e-11  Score=67.93  Aligned_cols=82  Identities=15%  Similarity=0.305  Sum_probs=63.3

Q ss_pred             CCCCccccCCCccccccCCCCCC--CCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGS--NPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~--~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+|+.|||.+.........  ....++..|++||.+.+..++.+.|+|++|++++++++ |..||...+..+....
T Consensus       134 ~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~  213 (256)
T cd05114         134 SSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEM  213 (256)
T ss_pred             cCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence            35667899999988665333211  12234557999999887788889999999999999999 8999998888888777


Q ss_pred             HHhCC
Q psy8825          79 ITDHS   83 (92)
Q Consensus        79 i~~~~   83 (92)
                      +.++.
T Consensus       214 i~~~~  218 (256)
T cd05114         214 ISRGF  218 (256)
T ss_pred             HHCCC
Confidence            77654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.27  E-value=2.4e-11  Score=71.67  Aligned_cols=81  Identities=17%  Similarity=0.281  Sum_probs=65.2

Q ss_pred             CCCCccccCCCccccccCCCC----CCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR----GSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~----~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~   76 (92)
                      +.++.++|.|||.+.......    ......++..|++||.+.+. .++.+.|+|++|++++++++|..||.+.+..+.+
T Consensus       137 ~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~  216 (330)
T cd07834         137 NSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQL  216 (330)
T ss_pred             cCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHH
Confidence            456789999999887765543    23445788899999998776 6788899999999999999999999988877766


Q ss_pred             HHHHhC
Q psy8825          77 AAITDH   82 (92)
Q Consensus        77 ~~i~~~   82 (92)
                      ..+...
T Consensus       217 ~~i~~~  222 (330)
T cd07834         217 NLIVEV  222 (330)
T ss_pred             HHHHHh
Confidence            666553

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.27  E-value=3.5e-11  Score=69.54  Aligned_cols=78  Identities=18%  Similarity=0.294  Sum_probs=60.7

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+++.|||.+....... ......++..|++||.+.+ ..++.+.|+|++|++++++++|..||.+.+..+....+
T Consensus       134 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~  213 (286)
T cd07847         134 TKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLI  213 (286)
T ss_pred             cCCCcEEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            456789999999987765443 3334567889999999765 44678899999999999999999999987765554444

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.27  E-value=5.1e-11  Score=67.83  Aligned_cols=78  Identities=15%  Similarity=0.236  Sum_probs=62.9

Q ss_pred             CccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q psy8825           5 QPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH   82 (92)
Q Consensus         5 ~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~   82 (92)
                      ..+|+.|||.+.............|+..|++||.+....++.+.|+|++|+++++++++..||.+.+.......+.+.
T Consensus       139 ~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~  216 (256)
T cd08220         139 MVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSG  216 (256)
T ss_pred             CEEEEccCCCceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhc
Confidence            457899999987765554445567888999999988777788899999999999999999999887766666555544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.27  E-value=2.2e-11  Score=72.63  Aligned_cols=68  Identities=16%  Similarity=0.245  Sum_probs=53.0

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccC----C-CCchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQ----P-YGKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~----~-~~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      +.++.+||.|||.+..+... .......|+..|++||.+...    . .+.+.|+|++|+++++++.|..||..
T Consensus       202 ~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~  275 (353)
T PLN00034        202 NSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGV  275 (353)
T ss_pred             cCCCCEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence            46778999999998766433 233456899999999987431    2 24578999999999999999999974

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.27  E-value=2.4e-11  Score=70.27  Aligned_cols=81  Identities=15%  Similarity=0.234  Sum_probs=61.7

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhc-----cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIIL-----YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~-----~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      +.++.+++.|||.+...... .......++..|++||.+.     ...++.+.|+|++|++++++++|..||...+..+.
T Consensus       137 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~  216 (282)
T cd06643         137 TLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV  216 (282)
T ss_pred             ccCCCEEEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH
Confidence            45678999999988665433 2344567899999999874     23456789999999999999999999988777666


Q ss_pred             HHHHHhC
Q psy8825          76 FAAITDH   82 (92)
Q Consensus        76 ~~~i~~~   82 (92)
                      ...+...
T Consensus       217 ~~~~~~~  223 (282)
T cd06643         217 LLKIAKS  223 (282)
T ss_pred             HHHHhhc
Confidence            5555443

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.27  E-value=2.7e-11  Score=68.99  Aligned_cols=74  Identities=16%  Similarity=0.243  Sum_probs=59.2

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      +.++.+++.|||.+....... ......++..|++||.+.+..++.+.|+|++|++++++++|..||........
T Consensus       133 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~  207 (256)
T cd06612         133 NEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA  207 (256)
T ss_pred             CCCCcEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh
Confidence            456789999999987765443 33445688899999998887888899999999999999999999977655443

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.27  E-value=4.4e-11  Score=68.43  Aligned_cols=81  Identities=17%  Similarity=0.340  Sum_probs=61.6

Q ss_pred             CCCCccccCCCccccccCCCCC--CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG--SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~--~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+++.|||.+..+.....  .....++..|++||......++.+.|+|++|++++++++ |..||.+.+..+....
T Consensus       136 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~  215 (260)
T cd05070         136 GDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQ  215 (260)
T ss_pred             eCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            4566789999999876543321  122234567999999877778889999999999999998 8899988877777666


Q ss_pred             HHhC
Q psy8825          79 ITDH   82 (92)
Q Consensus        79 i~~~   82 (92)
                      +...
T Consensus       216 ~~~~  219 (260)
T cd05070         216 VERG  219 (260)
T ss_pred             HHcC
Confidence            6553

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.26  E-value=4.8e-11  Score=70.64  Aligned_cols=80  Identities=20%  Similarity=0.272  Sum_probs=60.9

Q ss_pred             CCCCccccCCCccccccCCCC-----CCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-----GSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-----~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      +.++.+++.|||.+.......     ......|+..|++||...+ ..++.+.|+|++|+++++++.|..||.+.+..+.
T Consensus       139 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~  218 (332)
T cd07857         139 NADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQ  218 (332)
T ss_pred             cCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHH
Confidence            456789999999887654321     1233578999999998765 4578889999999999999999999988766555


Q ss_pred             HHHHHh
Q psy8825          76 FAAITD   81 (92)
Q Consensus        76 ~~~i~~   81 (92)
                      +..+..
T Consensus       219 ~~~~~~  224 (332)
T cd07857         219 LNQILQ  224 (332)
T ss_pred             HHHHHH
Confidence            554444

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.26  E-value=4.6e-11  Score=69.04  Aligned_cols=78  Identities=17%  Similarity=0.231  Sum_probs=59.2

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.++|.|||.+....... ......++..|++||.+... .++.+.|+|++|++++++++|..||.+....+....+
T Consensus       135 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~  214 (285)
T cd07861         135 DNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRI  214 (285)
T ss_pred             cCCCcEEECcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            467789999999886654332 23344678899999987653 4678899999999999999999999887665444333

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.26  E-value=3.6e-11  Score=68.79  Aligned_cols=81  Identities=19%  Similarity=0.366  Sum_probs=62.2

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+++.|||.+.......  ......++..|++||......++.+.|+|++|++++++++ |..||.+....+....
T Consensus       137 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~  216 (261)
T cd05072         137 SESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSA  216 (261)
T ss_pred             cCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHH
Confidence            456788999999987654332  1222345667999999887778888999999999999998 9999988877776666


Q ss_pred             HHhC
Q psy8825          79 ITDH   82 (92)
Q Consensus        79 i~~~   82 (92)
                      +...
T Consensus       217 ~~~~  220 (261)
T cd05072         217 LQRG  220 (261)
T ss_pred             HHcC
Confidence            6544

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.26  E-value=5.3e-11  Score=69.45  Aligned_cols=80  Identities=16%  Similarity=0.299  Sum_probs=59.7

Q ss_pred             CCCCccccCCCccccccCCCC-----CCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-----GSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-----~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      ++++.+|+.|||.+.......     ......++..|++||.+.+. .++.+.|+|++|++++++++|..+|.+.+....
T Consensus       153 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~  232 (310)
T cd07865         153 TKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQ  232 (310)
T ss_pred             CCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            456789999999886654322     12345678889999987654 357789999999999999999999988776555


Q ss_pred             HHHHHh
Q psy8825          76 FAAITD   81 (92)
Q Consensus        76 ~~~i~~   81 (92)
                      ...+..
T Consensus       233 ~~~~~~  238 (310)
T cd07865         233 LTLISQ  238 (310)
T ss_pred             HHHHHH
Confidence            444444

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.26  E-value=3.5e-11  Score=70.60  Aligned_cols=73  Identities=19%  Similarity=0.252  Sum_probs=58.2

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      +.++.+|+.|||.+..... ......+|+..|++||...+..++.+.|+|++|++++++++|..||...+....
T Consensus       134 ~~~~~~~l~dfg~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~  206 (308)
T cd06615         134 NSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKEL  206 (308)
T ss_pred             ecCCcEEEccCCCcccccc-cccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhH
Confidence            4567789999998865533 233456889999999998777788889999999999999999999976654333

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.25  E-value=3.6e-11  Score=68.91  Aligned_cols=80  Identities=16%  Similarity=0.221  Sum_probs=60.5

Q ss_pred             CCCCccccCCCccccccCCC-------CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-------RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE   74 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-------~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~   74 (92)
                      ++++.+++.|||.+......       .......|+..|++||...+..++.+.|+|++|++++++++|..||...+...
T Consensus       136 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~  215 (265)
T cd06631         136 MPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA  215 (265)
T ss_pred             CCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH
Confidence            45678999999987654321       11234568889999999888778889999999999999999999998766554


Q ss_pred             HHHHHHh
Q psy8825          75 LFAAITD   81 (92)
Q Consensus        75 ~~~~i~~   81 (92)
                      ....+..
T Consensus       216 ~~~~~~~  222 (265)
T cd06631         216 AMFYIGA  222 (265)
T ss_pred             HHHHhhh
Confidence            4444433

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.25  E-value=6.6e-11  Score=68.05  Aligned_cols=81  Identities=14%  Similarity=0.304  Sum_probs=61.1

Q ss_pred             CCCCccccCCCccccccCCCCCCC--CCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSN--PRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~--~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+++.|||............  ...++..|++||.+.+..++.+.|+|++|+++++++. |..||.+.+..+.+..
T Consensus       141 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~  220 (266)
T cd05064         141 NSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKA  220 (266)
T ss_pred             cCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHH
Confidence            456678999999765543222111  2334568999999888888899999999999999775 9999998887777777


Q ss_pred             HHhC
Q psy8825          79 ITDH   82 (92)
Q Consensus        79 i~~~   82 (92)
                      +..+
T Consensus       221 ~~~~  224 (266)
T cd05064         221 VEDG  224 (266)
T ss_pred             HHCC
Confidence            6655

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.25  E-value=4e-11  Score=69.25  Aligned_cols=78  Identities=15%  Similarity=0.253  Sum_probs=61.1

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+++.|||.+..+.... ......++..|++||.+....++.+.|+|++|++++++++|..||...+.......+
T Consensus       135 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~  213 (277)
T cd06640         135 SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI  213 (277)
T ss_pred             cCCCCEEEcccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhh
Confidence            456778999999887664432 233456788999999988777888999999999999999999999877665554444

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.25  E-value=8.3e-11  Score=68.90  Aligned_cols=81  Identities=21%  Similarity=0.382  Sum_probs=60.4

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      ++++.+||.|||.+........   .....++..|++||.+.+..++.+.|+|++|++++++++ |..||.+.+..+...
T Consensus       174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~  253 (307)
T cd05098         174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK  253 (307)
T ss_pred             cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHH
Confidence            5677899999998866543221   111234467999999887778889999999999999998 888998877666655


Q ss_pred             HHHhC
Q psy8825          78 AITDH   82 (92)
Q Consensus        78 ~i~~~   82 (92)
                      .+...
T Consensus       254 ~~~~~  258 (307)
T cd05098         254 LLKEG  258 (307)
T ss_pred             HHHcC
Confidence            55544

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.25  E-value=7.8e-11  Score=69.25  Aligned_cols=81  Identities=17%  Similarity=0.367  Sum_probs=61.9

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+||.|||.+........   .....++..|++||.+....++.+.|+|++|++++++++ |..||.+.+..+...
T Consensus       168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~  247 (314)
T cd05099         168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFK  247 (314)
T ss_pred             cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            4567899999999876643221   112234457999999887778889999999999999998 889998887777776


Q ss_pred             HHHhC
Q psy8825          78 AITDH   82 (92)
Q Consensus        78 ~i~~~   82 (92)
                      .+...
T Consensus       248 ~~~~~  252 (314)
T cd05099         248 LLREG  252 (314)
T ss_pred             HHHcC
Confidence            66654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.25  E-value=6e-11  Score=67.80  Aligned_cols=81  Identities=17%  Similarity=0.315  Sum_probs=61.5

Q ss_pred             CCCCccccCCCccccccCCCCCC----CCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGS----NPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~----~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~   76 (92)
                      +.++.+|+.|||.+..+......    ....++..|++||......++.+.|+|++|++++++++ |..||...+..+..
T Consensus       129 ~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~  208 (257)
T cd05060         129 VNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVI  208 (257)
T ss_pred             cCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHH
Confidence            45678899999988766443321    11123457999999887788889999999999999997 99999887776666


Q ss_pred             HHHHhC
Q psy8825          77 AAITDH   82 (92)
Q Consensus        77 ~~i~~~   82 (92)
                      ..+.+.
T Consensus       209 ~~~~~~  214 (257)
T cd05060         209 AMLESG  214 (257)
T ss_pred             HHHHcC
Confidence            666554

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.25  E-value=5.6e-11  Score=68.23  Aligned_cols=81  Identities=20%  Similarity=0.370  Sum_probs=62.0

Q ss_pred             CCCCccccCCCccccccCCCCCC---CCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGS---NPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~---~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      ++++.+|+.|||.+.........   ....++..|++||.+....++.+.|+|++|++++++++ |..||.+....+.+.
T Consensus       147 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~  226 (273)
T cd05035         147 REDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYD  226 (273)
T ss_pred             CCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            45678899999998766443221   11234567999999877778889999999999999998 889998887777766


Q ss_pred             HHHhC
Q psy8825          78 AITDH   82 (92)
Q Consensus        78 ~i~~~   82 (92)
                      .+...
T Consensus       227 ~~~~~  231 (273)
T cd05035         227 YLRHG  231 (273)
T ss_pred             HHHcC
Confidence            66654

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>KOG0194|consensus

Probab=99.24  E-value=3.8e-12  Score=78.17  Aligned_cols=87  Identities=17%  Similarity=0.221  Sum_probs=68.2

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCC-cCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRP-SAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~-g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~i   79 (92)
                      ++...+|++|||+++.-..-......+ --..|+|||.+....|+.+.|+|++|++.||.++ |..||.+....++..+|
T Consensus       296 ~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI  375 (474)
T KOG0194|consen  296 SKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKI  375 (474)
T ss_pred             cCCCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHH
Confidence            345667999999986654222222122 2358999999988889999999999999999998 88899999999999999


Q ss_pred             HhCCCcCCC
Q psy8825          80 TDHSVSYPK   88 (92)
Q Consensus        80 ~~~~~~~p~   88 (92)
                      ....++.|.
T Consensus       376 ~~~~~r~~~  384 (474)
T KOG0194|consen  376 VKNGYRMPI  384 (474)
T ss_pred             HhcCccCCC
Confidence            787766554

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.24  E-value=4.1e-11  Score=71.25  Aligned_cols=78  Identities=21%  Similarity=0.304  Sum_probs=60.2

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.++|.|||.+.....  ......++..|++||.+.. ..++.+.|+|++|++++++++|..||.+.+....+..+.
T Consensus       151 ~~~~~~kL~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~  228 (342)
T cd07879         151 NEDCELKILDFGLARHADA--EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL  228 (342)
T ss_pred             CCCCCEEEeeCCCCcCCCC--CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            4677899999998765422  2334567889999999765 457888999999999999999999999877655554444


Q ss_pred             h
Q psy8825          81 D   81 (92)
Q Consensus        81 ~   81 (92)
                      .
T Consensus       229 ~  229 (342)
T cd07879         229 K  229 (342)
T ss_pred             H
Confidence            3

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.24  E-value=7e-11  Score=68.32  Aligned_cols=78  Identities=14%  Similarity=0.246  Sum_probs=57.2

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCC-CCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPF-DGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~-~~~~~~~~~~~   78 (92)
                      +.++.++++|||.+...... .......++..|++||.+.+. .++.+.|+|++|++++++++|..|+ .+.+..+.+..
T Consensus       133 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~  212 (284)
T cd07839         133 NKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKR  212 (284)
T ss_pred             cCCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHH
Confidence            45678999999988765443 233345678899999987654 3688899999999999999987764 55554444444


Q ss_pred             H
Q psy8825          79 I   79 (92)
Q Consensus        79 i   79 (92)
                      +
T Consensus       213 ~  213 (284)
T cd07839         213 I  213 (284)
T ss_pred             H
Confidence            3

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.24  E-value=8.1e-11  Score=68.00  Aligned_cols=81  Identities=16%  Similarity=0.350  Sum_probs=60.5

Q ss_pred             CCCCccccCCCccccccCCCCCC---CCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGS---NPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~---~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+||.|||.+.........   ....++..|++||...+..++.+.|+|++|++++++++ |..||..........
T Consensus       143 ~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~  222 (279)
T cd05109         143 KSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPD  222 (279)
T ss_pred             cCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            35677899999998776433221   11234567999999887888889999999999999998 889998777665555


Q ss_pred             HHHhC
Q psy8825          78 AITDH   82 (92)
Q Consensus        78 ~i~~~   82 (92)
                      .+...
T Consensus       223 ~~~~~  227 (279)
T cd05109         223 LLEKG  227 (279)
T ss_pred             HHHCC
Confidence            45443

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.24  E-value=6.7e-11  Score=68.56  Aligned_cols=68  Identities=19%  Similarity=0.392  Sum_probs=53.8

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhc-cCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIIL-YQPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~-~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      ++++.+++.|||.+...... ......|+..|++||... +..++.+.|+|++|++++++++|..||...
T Consensus       131 ~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~  199 (279)
T cd05633         131 DEHGHVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQH  199 (279)
T ss_pred             CCCCCEEEccCCcceecccc-CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCC
Confidence            45678999999988655332 223457899999999875 355788899999999999999999999753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.24  E-value=4.7e-11  Score=71.09  Aligned_cols=77  Identities=19%  Similarity=0.299  Sum_probs=59.1

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      ++++.+|+.|||.+....  .......++..|++||.+.+ ..++.+.|+|++|++++++++|..||.+.+....+..+.
T Consensus       154 ~~~~~~kl~dfg~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~  231 (345)
T cd07877         154 NEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL  231 (345)
T ss_pred             cCCCCEEEeccccccccc--ccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            467789999999886543  22334577889999998765 456788999999999999999999998776655444443

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.24  E-value=3.9e-11  Score=71.35  Aligned_cols=73  Identities=21%  Similarity=0.381  Sum_probs=56.1

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEE   74 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~   74 (92)
                      +.++.++|.|||.+..+....   ......++..|++||.+.+..++.+.|+|++|++++++++ |..||.+....+
T Consensus       207 ~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~  283 (337)
T cd05054         207 SENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE  283 (337)
T ss_pred             eCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH
Confidence            346778999999987654322   1223345678999999988888899999999999999997 999998754433

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.24  E-value=2.7e-11  Score=79.36  Aligned_cols=72  Identities=18%  Similarity=0.128  Sum_probs=57.2

Q ss_pred             CCCCccccCCCccccccCCC-------------------CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPG-------------------RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV   62 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-------------------~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~   62 (92)
                      +.++.+++.|||.+......                   ......+||+.|++||.+.+..++.+.|+|++|++++++++
T Consensus       147 d~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLT  226 (932)
T PRK13184        147 GLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLT  226 (932)
T ss_pred             cCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHH
Confidence            56778999999988655211                   01123579999999999988888999999999999999999


Q ss_pred             CCCCCCCCCHH
Q psy8825          63 GQPPFDGEDEE   73 (92)
Q Consensus        63 g~~p~~~~~~~   73 (92)
                      |..||.+.+..
T Consensus       227 G~~PF~~~~~~  237 (932)
T PRK13184        227 LSFPYRRKKGR  237 (932)
T ss_pred             CCCCCCCcchh
Confidence            99999875543

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.24  E-value=9e-11  Score=67.20  Aligned_cols=81  Identities=19%  Similarity=0.355  Sum_probs=61.6

Q ss_pred             CCCCccccCCCccccccCCCCCCC--CCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSN--PRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~--~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      ++++.+++.|||.+..........  .......|++||......++.+.|+|++|++++++++ |..||.+.+.......
T Consensus       137 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~  216 (261)
T cd05068         137 GENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQ  216 (261)
T ss_pred             cCCCCEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            456789999999887664322111  1122347999999887778889999999999999998 9999998887777776


Q ss_pred             HHhC
Q psy8825          79 ITDH   82 (92)
Q Consensus        79 i~~~   82 (92)
                      +.+.
T Consensus       217 ~~~~  220 (261)
T cd05068         217 VDQG  220 (261)
T ss_pred             HHcC
Confidence            6554

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.24  E-value=6.7e-11  Score=67.49  Aligned_cols=80  Identities=14%  Similarity=0.331  Sum_probs=62.0

Q ss_pred             CCCCccccCCCccccccCCCC----CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR----GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~----~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~   76 (92)
                      +.++.+|+.|||.+..+....    ......++..|++||......++.+.|+|++|++++++++ |..||...+..+..
T Consensus       131 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~  210 (257)
T cd05040         131 ASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQIL  210 (257)
T ss_pred             ecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            456789999999887664421    1122456778999999888788888999999999999998 99999877776666


Q ss_pred             HHHHh
Q psy8825          77 AAITD   81 (92)
Q Consensus        77 ~~i~~   81 (92)
                      ..+..
T Consensus       211 ~~~~~  215 (257)
T cd05040         211 KKIDK  215 (257)
T ss_pred             HHHHh
Confidence            65554

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.24  E-value=4.2e-11  Score=69.62  Aligned_cols=81  Identities=15%  Similarity=0.225  Sum_probs=60.2

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhc-----cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIIL-----YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~-----~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      +.++.+++.|||.+...... .......++..|++||.+.     ...++.+.|+|++|++++++++|..||...+....
T Consensus       144 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~  223 (292)
T cd06644         144 TLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV  223 (292)
T ss_pred             cCCCCEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHH
Confidence            35678999999987654332 2334457888999999874     23457789999999999999999999987766665


Q ss_pred             HHHHHhC
Q psy8825          76 FAAITDH   82 (92)
Q Consensus        76 ~~~i~~~   82 (92)
                      ..++...
T Consensus       224 ~~~~~~~  230 (292)
T cd06644         224 LLKIAKS  230 (292)
T ss_pred             HHHHhcC
Confidence            5555443

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.24  E-value=1.1e-10  Score=66.83  Aligned_cols=81  Identities=19%  Similarity=0.362  Sum_probs=59.9

Q ss_pred             CCCCccccCCCccccccCCCC-----CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-----GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-----~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~   75 (92)
                      +.++.+|+.|||.+.......     ......++..|++||......++.+.|+|++|++++++++ +.+||...+..+.
T Consensus       132 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~  211 (262)
T cd05058         132 DESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDI  211 (262)
T ss_pred             cCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence            456788999999886553321     1123345678999999887788889999999999999998 5677877766666


Q ss_pred             HHHHHhC
Q psy8825          76 FAAITDH   82 (92)
Q Consensus        76 ~~~i~~~   82 (92)
                      ...+.+.
T Consensus       212 ~~~~~~~  218 (262)
T cd05058         212 TVYLLQG  218 (262)
T ss_pred             HHHHhcC
Confidence            5555554

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.24  E-value=6.9e-11  Score=67.87  Aligned_cols=78  Identities=17%  Similarity=0.296  Sum_probs=59.5

Q ss_pred             CCCCccccCCCccccccCCCC----CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR----GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~----~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~   77 (92)
                      +.++.+++.|||.+..+....    ......++..|++||.+.+..++...|+|++|++++++++|..||...+....+.
T Consensus       140 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~  219 (266)
T cd06651         140 DSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIF  219 (266)
T ss_pred             CCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHH
Confidence            355678999999886553321    1223467889999999988778889999999999999999999998766554444


Q ss_pred             HH
Q psy8825          78 AI   79 (92)
Q Consensus        78 ~i   79 (92)
                      .+
T Consensus       220 ~~  221 (266)
T cd06651         220 KI  221 (266)
T ss_pred             HH
Confidence            43

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.24  E-value=4.9e-11  Score=70.13  Aligned_cols=77  Identities=19%  Similarity=0.392  Sum_probs=59.3

Q ss_pred             CCCCccccCCCccccccCCCCCC---CCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGS---NPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~---~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+|+.|||.+.........   ....++..|++||.+....++.+.|+|++|++++++++ |..||.+....+...
T Consensus       143 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~  222 (316)
T cd05108         143 KTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS  222 (316)
T ss_pred             cCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            46678999999999776543322   22234567999999988888899999999999999987 999998876655443


Q ss_pred             H
Q psy8825          78 A   78 (92)
Q Consensus        78 ~   78 (92)
                      .
T Consensus       223 ~  223 (316)
T cd05108         223 I  223 (316)
T ss_pred             H
Confidence            3

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.24  E-value=2e-11  Score=70.04  Aligned_cols=74  Identities=15%  Similarity=0.144  Sum_probs=55.9

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhc---cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIIL---YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~---~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      +.++.+++.|||.+...... .......|+..|++||.+.   ...++.+.|+|++|++++++++|..||...+..+.
T Consensus       140 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~  217 (267)
T cd06646         140 TDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA  217 (267)
T ss_pred             CCCCCEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh
Confidence            45677999999998766433 2334457888999999874   23467789999999999999999999876544433

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.24  E-value=5.1e-11  Score=70.70  Aligned_cols=76  Identities=14%  Similarity=0.201  Sum_probs=58.6

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~   77 (92)
                      +.++.+||.|||.+...... .......++..|++||.+.. ..++.+.|+|++|++++++++|..||.+.+....+.
T Consensus       142 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~  219 (337)
T cd07858         142 NANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLK  219 (337)
T ss_pred             cCCCCEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHH
Confidence            45678999999988765443 23344578889999998764 457888999999999999999999998776544433

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.23  E-value=8.3e-11  Score=69.73  Aligned_cols=76  Identities=21%  Similarity=0.286  Sum_probs=57.9

Q ss_pred             CCCCccccCCCccccccCCCC----CCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR----GSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~----~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~   76 (92)
                      +.++.+|+.|||.+.......    ......|+..|++||.+.. ..++.+.|+|++|++++++++|..||.+.+.....
T Consensus       140 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~  219 (336)
T cd07849         140 NTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQL  219 (336)
T ss_pred             CCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            466789999999876654322    1233578899999998654 45788899999999999999999999877654444


Q ss_pred             H
Q psy8825          77 A   77 (92)
Q Consensus        77 ~   77 (92)
                      .
T Consensus       220 ~  220 (336)
T cd07849         220 N  220 (336)
T ss_pred             H
Confidence            3

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.23  E-value=9.6e-11  Score=68.36  Aligned_cols=80  Identities=20%  Similarity=0.360  Sum_probs=62.1

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      ++++.+++.|||.+....... ......|+..|++||......++.+.|+|++|++++++++|..||.+.+..+....+.
T Consensus       150 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~  229 (292)
T cd06657         150 THDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR  229 (292)
T ss_pred             CCCCCEEEcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            567789999999876554332 2334578889999999877777888999999999999999999998876665554443


Q ss_pred             h
Q psy8825          81 D   81 (92)
Q Consensus        81 ~   81 (92)
                      .
T Consensus       230 ~  230 (292)
T cd06657         230 D  230 (292)
T ss_pred             h
Confidence            3

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.23  E-value=3.4e-11  Score=68.86  Aligned_cols=81  Identities=12%  Similarity=0.259  Sum_probs=62.0

Q ss_pred             CCCCccccCCCccccccCCCCCC-----CCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGS-----NPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~-----~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      ++++.+++.|||.+.........     ....|+..|++||.+... .++.+.|+|++|++++++++|..||...+....
T Consensus       136 ~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~  215 (267)
T cd06610         136 GEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV  215 (267)
T ss_pred             cCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh
Confidence            45678999999987666543222     345688899999998765 578889999999999999999999987766555


Q ss_pred             HHHHHhC
Q psy8825          76 FAAITDH   82 (92)
Q Consensus        76 ~~~i~~~   82 (92)
                      +.++...
T Consensus       216 ~~~~~~~  222 (267)
T cd06610         216 LMLTLQN  222 (267)
T ss_pred             HHHHhcC
Confidence            5554443

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.23  E-value=9.3e-11  Score=72.46  Aligned_cols=66  Identities=15%  Similarity=0.186  Sum_probs=52.8

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPF   67 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~   67 (92)
                      +.++.+||.|||.+.......   .....+||..|++||++.+..++.+.|+|++|+++++++.+..++
T Consensus       294 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l  362 (461)
T PHA03211        294 NGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL  362 (461)
T ss_pred             CCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence            456789999999987654332   123457999999999998888899999999999999999876544

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.23  E-value=9.4e-11  Score=67.01  Aligned_cols=81  Identities=17%  Similarity=0.325  Sum_probs=62.4

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+++.|||.+..+....  ......++..|++||...+..++.+.|+|++|++++++++ |..||.+......+..
T Consensus       137 ~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~  216 (261)
T cd05034         137 GENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQ  216 (261)
T ss_pred             cCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            567789999999886654321  1112234567999999887778889999999999999998 9999988877777777


Q ss_pred             HHhC
Q psy8825          79 ITDH   82 (92)
Q Consensus        79 i~~~   82 (92)
                      +...
T Consensus       217 ~~~~  220 (261)
T cd05034         217 VERG  220 (261)
T ss_pred             HHcC
Confidence            6654

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.23  E-value=2.6e-11  Score=72.58  Aligned_cols=66  Identities=14%  Similarity=0.170  Sum_probs=53.2

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPF   67 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~   67 (92)
                      +.++.+||.|||.+.............|+..|++||.+.+..++.+.|+|++|+++++++++..++
T Consensus       191 ~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        191 NDVDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             CCCCCEEEecCccccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence            456778999999986554444445567999999999998888899999999999999999854433

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.23  E-value=3.5e-11  Score=69.56  Aligned_cols=77  Identities=16%  Similarity=0.191  Sum_probs=58.3

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhc-----cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIIL-----YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~-----~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      +.++.+++.|||.+...... .......|+..|++||.+.     ...++.+.|+|++|++++++++|..||........
T Consensus       155 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~  234 (282)
T cd06636         155 TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA  234 (282)
T ss_pred             CCCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh
Confidence            45778999999987665432 2344567899999999875     23467789999999999999999999977655444


Q ss_pred             HHH
Q psy8825          76 FAA   78 (92)
Q Consensus        76 ~~~   78 (92)
                      +..
T Consensus       235 ~~~  237 (282)
T cd06636         235 LFL  237 (282)
T ss_pred             hhh
Confidence            433

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.23  E-value=1.1e-10  Score=66.80  Aligned_cols=81  Identities=15%  Similarity=0.346  Sum_probs=60.2

Q ss_pred             CCCCccccCCCccccccCCCCCC--CCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGS--NPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~--~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+|+.|||.+.........  ....++..|++||.+.+..++.+.|+|++|++++++++ |..||.+.+..+....
T Consensus       134 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~  213 (256)
T cd05059         134 GEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVES  213 (256)
T ss_pred             CCCCcEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Confidence            45678999999988655332211  11123347999999888888889999999999999998 8899988777666666


Q ss_pred             HHhC
Q psy8825          79 ITDH   82 (92)
Q Consensus        79 i~~~   82 (92)
                      +...
T Consensus       214 ~~~~  217 (256)
T cd05059         214 VSAG  217 (256)
T ss_pred             HHcC
Confidence            6554

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.23  E-value=9.8e-11  Score=66.79  Aligned_cols=88  Identities=30%  Similarity=0.534  Sum_probs=68.6

Q ss_pred             CCCCccccCCCccccccCCCC---------CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---------GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE   72 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---------~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~   72 (92)
                      +.++.+++.|||.+.......         ......++..|++||.......+.+.|+|++|++++++++|..||.....
T Consensus       127 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~  206 (265)
T cd05579         127 DSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP  206 (265)
T ss_pred             cCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH
Confidence            467789999999876543321         22335678899999998777778889999999999999999999998888


Q ss_pred             HHHHHHHHhCCCcCCCC
Q psy8825          73 EELFAAITDHSVSYPKM   89 (92)
Q Consensus        73 ~~~~~~i~~~~~~~p~~   89 (92)
                      .+....+..+...+|..
T Consensus       207 ~~~~~~~~~~~~~~~~~  223 (265)
T cd05579         207 EEIFQNILNGKIEWPED  223 (265)
T ss_pred             HHHHHHHhcCCcCCCcc
Confidence            77777777666665544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.23  E-value=1.5e-10  Score=67.31  Aligned_cols=80  Identities=19%  Similarity=0.416  Sum_probs=61.6

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      ..++.+|+.|||.+........   .....++..|++||......++.+.|+|++|++++++++ |..||.+....+...
T Consensus       161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~  240 (290)
T cd05045         161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFN  240 (290)
T ss_pred             cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            4567889999999876543321   222345678999999877778889999999999999998 999998888777666


Q ss_pred             HHHh
Q psy8825          78 AITD   81 (92)
Q Consensus        78 ~i~~   81 (92)
                      .+.+
T Consensus       241 ~~~~  244 (290)
T cd05045         241 LLKT  244 (290)
T ss_pred             HHhC
Confidence            6554

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.22  E-value=6.7e-11  Score=68.69  Aligned_cols=81  Identities=15%  Similarity=0.226  Sum_probs=60.8

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccC-----CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQ-----PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~-----~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      ..++.+|+.|||.+....... ......|+..|++||.+...     .++.+.|+|++|++++++++|..||...+....
T Consensus       162 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~  241 (291)
T cd06639         162 TTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT  241 (291)
T ss_pred             cCCCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH
Confidence            356678999999887654332 23345788899999987543     256789999999999999999999988776655


Q ss_pred             HHHHHhC
Q psy8825          76 FAAITDH   82 (92)
Q Consensus        76 ~~~i~~~   82 (92)
                      +..+.+.
T Consensus       242 ~~~~~~~  248 (291)
T cd06639         242 LFKIPRN  248 (291)
T ss_pred             HHHHhcC
Confidence            5555443

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.22  E-value=4.2e-11  Score=69.11  Aligned_cols=78  Identities=15%  Similarity=0.233  Sum_probs=60.6

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      ++++.+++.|||.+..+.... ......|+..|++||.+.+..++.+.|+|++|++++++++|..|+...........+
T Consensus       135 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~  213 (277)
T cd06642         135 SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI  213 (277)
T ss_pred             eCCCCEEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhh
Confidence            356789999999887665432 333457888999999998877888999999999999999999998766554444333

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.22  E-value=8.8e-11  Score=68.03  Aligned_cols=72  Identities=15%  Similarity=0.227  Sum_probs=54.5

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccC------CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQ------PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE   74 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~------~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~   74 (92)
                      +.++.+++.|||.+...... ......++..|++||.+...      .++.+.|+|++|++++++++|..||.......
T Consensus       137 ~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~  214 (286)
T cd06622         137 NGNGQVKLCDFGVSGNLVAS-LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN  214 (286)
T ss_pred             CCCCCEEEeecCCcccccCC-ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh
Confidence            35667899999988665332 33445688899999987543      24678999999999999999999997654433

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.22  E-value=4.5e-11  Score=70.80  Aligned_cols=80  Identities=16%  Similarity=0.238  Sum_probs=60.2

Q ss_pred             CCCCccccCCCccccccCCCCC-----CCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG-----SNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~-----~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      ++++.+|+.|||.+........     .....|+..|++||.+.. ..++.+.|+|++|++++++++|..||.+.+....
T Consensus       141 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~  220 (334)
T cd07855         141 NEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQ  220 (334)
T ss_pred             cCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHH
Confidence            5678899999998866543221     123478889999998755 4568889999999999999999999988766555


Q ss_pred             HHHHHh
Q psy8825          76 FAAITD   81 (92)
Q Consensus        76 ~~~i~~   81 (92)
                      +..+..
T Consensus       221 ~~~~~~  226 (334)
T cd07855         221 LKLILS  226 (334)
T ss_pred             HHHHHH
Confidence            444333

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.22  E-value=1.4e-10  Score=66.35  Aligned_cols=83  Identities=16%  Similarity=0.293  Sum_probs=62.4

Q ss_pred             CCCCccccCCCccccccCCCCC--CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG--SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~--~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+|+.|||.+........  .....++..|++||...+..++.+.|+|++|++++++++ |..||...+..+....
T Consensus       134 ~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~  213 (256)
T cd05113         134 DDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEK  213 (256)
T ss_pred             cCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHH
Confidence            4567899999998765533321  112234567999999887778889999999999999998 9999988777777667


Q ss_pred             HHhCCC
Q psy8825          79 ITDHSV   84 (92)
Q Consensus        79 i~~~~~   84 (92)
                      +.+...
T Consensus       214 ~~~~~~  219 (256)
T cd05113         214 VSQGLR  219 (256)
T ss_pred             HhcCCC
Confidence            766543

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.21  E-value=1.9e-10  Score=65.35  Aligned_cols=81  Identities=20%  Similarity=0.367  Sum_probs=60.1

Q ss_pred             CCCCccccCCCccccccCCCCCC--CCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGS--NPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~--~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+|+.|||.+.........  ....++..|++||.+....++.+.|+|++|++++++++ |..||.+.........
T Consensus       127 ~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~  206 (250)
T cd05085         127 GENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQ  206 (250)
T ss_pred             cCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Confidence            45677899999988654333211  11234567999999887778888999999999999998 8999988776666666


Q ss_pred             HHhC
Q psy8825          79 ITDH   82 (92)
Q Consensus        79 i~~~   82 (92)
                      +...
T Consensus       207 ~~~~  210 (250)
T cd05085         207 VEKG  210 (250)
T ss_pred             HHcC
Confidence            5544

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.21  E-value=2.5e-11  Score=70.21  Aligned_cols=67  Identities=13%  Similarity=0.249  Sum_probs=56.1

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      +.++.+++.|||.+...... .....+|+..|++||.+....++.+.|+|++|++++++++|..||..
T Consensus       129 ~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~  195 (279)
T cd06619         129 NTRGQVKLCDFGVSTQLVNS-IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQ  195 (279)
T ss_pred             CCCCCEEEeeCCcceecccc-cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchh
Confidence            56778999999998665332 33456889999999998887888899999999999999999999864

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.21  E-value=8.6e-11  Score=67.44  Aligned_cols=81  Identities=19%  Similarity=0.314  Sum_probs=61.6

Q ss_pred             CCCCccccCCCccccccCCCCC--CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG--SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~--~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.++|.|||.+........  .....++..|++||......++.+.|+|++|++++++++ |..||.+....+.+..
T Consensus       136 ~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~  215 (262)
T cd05071         136 GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ  215 (262)
T ss_pred             cCCCcEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHH
Confidence            4567789999998866543321  122345667999999877778889999999999999998 8889988777666666


Q ss_pred             HHhC
Q psy8825          79 ITDH   82 (92)
Q Consensus        79 i~~~   82 (92)
                      +...
T Consensus       216 ~~~~  219 (262)
T cd05071         216 VERG  219 (262)
T ss_pred             HhcC
Confidence            6543

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.21  E-value=9.3e-11  Score=68.58  Aligned_cols=76  Identities=20%  Similarity=0.427  Sum_probs=57.2

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh--CCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV--GQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~--g~~p~~~~~~~~~~   76 (92)
                      ++++.+|+.|||.+........   .....++..|++||.+....++.+.|+|++|+++++++.  +..||.+.+..+.+
T Consensus       172 ~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~  251 (304)
T cd05096         172 GENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVI  251 (304)
T ss_pred             cCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHH
Confidence            4567899999999876543321   223355778999999887788899999999999999986  56788776655544


Q ss_pred             H
Q psy8825          77 A   77 (92)
Q Consensus        77 ~   77 (92)
                      .
T Consensus       252 ~  252 (304)
T cd05096         252 E  252 (304)
T ss_pred             H
Confidence            3

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG4278|consensus

Probab=99.21  E-value=5.5e-11  Score=75.39  Aligned_cols=81  Identities=21%  Similarity=0.447  Sum_probs=67.3

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCcC---CcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPSA---YSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELF   76 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g~---~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~   76 (92)
                      +|+...+|++|||+++.+. +..+....|.   ..|.+||.+-++.|+.+.|+|.+|+++||+.+ |-.||.|.+...++
T Consensus       398 VgEnhiVKvADFGLsRlMt-gDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY  476 (1157)
T KOG4278|consen  398 VGENHIVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY  476 (1157)
T ss_pred             ccccceEEeeccchhhhhc-CCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHH
Confidence            4778899999999998764 4445455554   47999999999999999999999999999997 78899999988887


Q ss_pred             HHHHhC
Q psy8825          77 AAITDH   82 (92)
Q Consensus        77 ~~i~~~   82 (92)
                      ..++.+
T Consensus       477 ~LLEkg  482 (1157)
T KOG4278|consen  477 GLLEKG  482 (1157)
T ss_pred             HHHhcc
Confidence            766654

>KOG1290|consensus

Probab=99.21  E-value=5.9e-12  Score=77.06  Aligned_cols=85  Identities=18%  Similarity=0.252  Sum_probs=67.5

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCC---CCC---CHHHHHH
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPF---DGE---DEEELFA   77 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~---~~~---~~~~~~~   77 (92)
                      +-.+|++|||-+.+...  ..+.-.-|.-|.+||++.+.+|+..+|+||..|+.+|+.+|-..|   .|.   ...++++
T Consensus       390 di~vKIaDlGNACW~~k--hFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA  467 (590)
T KOG1290|consen  390 DIRVKIADLGNACWVHK--HFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIA  467 (590)
T ss_pred             ceeEEEeeccchhhhhh--hhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHH
Confidence            34688999999977532  344456788899999999999999999999999999999986555   333   2367888


Q ss_pred             HHHhCCCcCCCCC
Q psy8825          78 AITDHSVSYPKMA   90 (92)
Q Consensus        78 ~i~~~~~~~p~~~   90 (92)
                      .|.+....+|+.+
T Consensus       468 ~i~ELLG~iPr~i  480 (590)
T KOG1290|consen  468 LIMELLGKIPRKI  480 (590)
T ss_pred             HHHHHHhhccHHH
Confidence            8888888888654

>KOG0584|consensus

Probab=99.21  E-value=2.1e-11  Score=76.11  Aligned_cols=80  Identities=15%  Similarity=0.308  Sum_probs=67.9

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCC-CCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG-EDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~-~~~~~~~~~i~   80 (92)
                      |.-|.+|+-|+|++...... ..++++|||.+||||... ..|+..+|+|++|..+.||.++.-||.. .++.+++.++.
T Consensus       180 G~~G~VKIGDLGLAtl~r~s-~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~  257 (632)
T KOG0584|consen  180 GNLGEVKIGDLGLATLLRKS-HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVT  257 (632)
T ss_pred             CCcCceeecchhHHHHhhcc-ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHH
Confidence            56689999999999665433 455589999999999875 6799999999999999999999999987 46778899988


Q ss_pred             hCC
Q psy8825          81 DHS   83 (92)
Q Consensus        81 ~~~   83 (92)
                      ++.
T Consensus       258 SGi  260 (632)
T KOG0584|consen  258 SGI  260 (632)
T ss_pred             cCC
Confidence            875

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.21  E-value=1.5e-10  Score=67.79  Aligned_cols=80  Identities=18%  Similarity=0.313  Sum_probs=59.2

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+++.|||.+........   .....++..|++||.+....++.+.|+|++|++++++++ |..||.+....+.+.
T Consensus       175 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~  254 (302)
T cd05055         175 THGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFY  254 (302)
T ss_pred             cCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHH
Confidence            4566789999999876643321   122345678999999887778889999999999999998 999998766554444


Q ss_pred             HHHh
Q psy8825          78 AITD   81 (92)
Q Consensus        78 ~i~~   81 (92)
                      +...
T Consensus       255 ~~~~  258 (302)
T cd05055         255 KLIK  258 (302)
T ss_pred             HHHH
Confidence            4443

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.21  E-value=1e-10  Score=67.68  Aligned_cols=79  Identities=18%  Similarity=0.243  Sum_probs=59.5

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQP-YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~-~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+|+.|||.+...... .......++..|++||.+.+.. ++.+.|+|++|++++++++|..||.+.+..+.+.++
T Consensus       134 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~  213 (284)
T cd07860         134 NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI  213 (284)
T ss_pred             CCCCCEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            46778999999988665433 2333446788899999876544 477899999999999999999999887665544443


Q ss_pred             H
Q psy8825          80 T   80 (92)
Q Consensus        80 ~   80 (92)
                      .
T Consensus       214 ~  214 (284)
T cd07860         214 F  214 (284)
T ss_pred             H
Confidence            3

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.21  E-value=1.1e-10  Score=67.97  Aligned_cols=81  Identities=17%  Similarity=0.264  Sum_probs=59.9

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCC----CCchhhHHhHHHHHHHHHhCCCCCCCCC-HHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQP----YGKSVDWWAYGVLLYEMLVGQPPFDGED-EEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~----~~~~~~~ws~g~~~~~~~~g~~p~~~~~-~~~~~   76 (92)
                      +.++.+||.|||.+..+..........++..|++||.+....    ++.+.|+|++|++++++++|..||.... ..+.+
T Consensus       149 ~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~  228 (296)
T cd06618         149 DASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVL  228 (296)
T ss_pred             cCCCCEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHH
Confidence            467789999999987665444444456788899999986443    6778999999999999999999997632 33444


Q ss_pred             HHHHhC
Q psy8825          77 AAITDH   82 (92)
Q Consensus        77 ~~i~~~   82 (92)
                      .++...
T Consensus       229 ~~~~~~  234 (296)
T cd06618         229 TKILQE  234 (296)
T ss_pred             HHHhcC
Confidence            444443

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.20  E-value=5.1e-11  Score=69.60  Aligned_cols=72  Identities=21%  Similarity=0.442  Sum_probs=58.2

Q ss_pred             CCCCccccCCCccccccCCCCC-CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG-SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEE   73 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~-~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~   73 (92)
                      +.++.+++.|||.+........ .....++..|++||.+....++.+.|+|++|++++++++|..||.+.+..
T Consensus       149 ~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~  221 (297)
T cd06656         149 GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL  221 (297)
T ss_pred             CCCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc
Confidence            4577899999998876644432 33457888999999988877888999999999999999999999776543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.20  E-value=1.7e-10  Score=66.01  Aligned_cols=81  Identities=17%  Similarity=0.308  Sum_probs=61.8

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+++.|||.+.......  ......++..|++||......++.+.|+|++|++++++++ |..||.+.+..+....
T Consensus       136 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~  215 (260)
T cd05067         136 SETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQN  215 (260)
T ss_pred             cCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHH
Confidence            456789999999886664222  1223345678999999887778888999999999999998 9999988777666665


Q ss_pred             HHhC
Q psy8825          79 ITDH   82 (92)
Q Consensus        79 i~~~   82 (92)
                      +...
T Consensus       216 ~~~~  219 (260)
T cd05067         216 LERG  219 (260)
T ss_pred             HHcC
Confidence            5543

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.20  E-value=1.1e-10  Score=69.40  Aligned_cols=78  Identities=19%  Similarity=0.310  Sum_probs=60.9

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+++.|||.+......  .....++..|++||.+.. ..++.+.|+|++|++++++++|..||.+.+..+.+..+.
T Consensus       152 ~~~~~~kL~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~  229 (343)
T cd07851         152 NEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIM  229 (343)
T ss_pred             CCCCCEEEcccccccccccc--ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            45678999999998665332  334567889999998754 356788999999999999999999998877766666554


Q ss_pred             h
Q psy8825          81 D   81 (92)
Q Consensus        81 ~   81 (92)
                      +
T Consensus       230 ~  230 (343)
T cd07851         230 N  230 (343)
T ss_pred             H
Confidence            4

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.20  E-value=1.6e-10  Score=66.08  Aligned_cols=81  Identities=25%  Similarity=0.444  Sum_probs=61.5

Q ss_pred             CCCCccccCCCccccccCCCCC-CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG-SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~-~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+|+.|||.+........ .....++..|++||......++.+.|+|++|++++++++ |..||.+.+..+.+..+
T Consensus       138 ~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~  217 (261)
T cd05148         138 GEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQI  217 (261)
T ss_pred             cCCceEEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH
Confidence            4567889999998866543321 222334567999999887778888999999999999998 89999888776666666


Q ss_pred             HhC
Q psy8825          80 TDH   82 (92)
Q Consensus        80 ~~~   82 (92)
                      ...
T Consensus       218 ~~~  220 (261)
T cd05148         218 TAG  220 (261)
T ss_pred             HhC
Confidence            543

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.20  E-value=8.1e-11  Score=67.99  Aligned_cols=82  Identities=13%  Similarity=0.227  Sum_probs=62.1

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhcc-----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILY-----QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~-----~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      +.++.+++.|||.+...... .......++..|++||.+..     ..++.+.|+|++|++++++++|..||.+.+..+.
T Consensus       137 ~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~  216 (280)
T cd06611         137 TLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV  216 (280)
T ss_pred             CCCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH
Confidence            45678999999987655332 23344578899999998742     3356789999999999999999999988877666


Q ss_pred             HHHHHhCC
Q psy8825          76 FAAITDHS   83 (92)
Q Consensus        76 ~~~i~~~~   83 (92)
                      +..+....
T Consensus       217 ~~~~~~~~  224 (280)
T cd06611         217 LLKILKSE  224 (280)
T ss_pred             HHHHhcCC
Confidence            66666543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.20  E-value=1.3e-10  Score=67.85  Aligned_cols=80  Identities=14%  Similarity=0.191  Sum_probs=59.9

Q ss_pred             CCCCccccCCCccccccCCCCC------------CCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG------------SNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFD   68 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~------------~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~   68 (92)
                      ++++.+++.|||.+........            .....++..|++||.+.+. .++.+.|+|++|++++++++|.+||.
T Consensus       149 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~  228 (311)
T cd07866         149 DNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQ  228 (311)
T ss_pred             CCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCC
Confidence            4567889999998865543211            1233567889999987653 46788999999999999999999999


Q ss_pred             CCCHHHHHHHHHh
Q psy8825          69 GEDEEELFAAITD   81 (92)
Q Consensus        69 ~~~~~~~~~~i~~   81 (92)
                      +.+.......+.+
T Consensus       229 ~~~~~~~~~~~~~  241 (311)
T cd07866         229 GKSDIDQLHLIFK  241 (311)
T ss_pred             CCCHHHHHHHHHH
Confidence            8877666555543

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.20  E-value=2e-10  Score=66.34  Aligned_cols=77  Identities=18%  Similarity=0.313  Sum_probs=57.6

Q ss_pred             ccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHh
Q psy8825           6 PFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~i~~   81 (92)
                      .+|+.|||.+........   ......+..|++||.+....++.+.|+|++|++++++++ |..||.+.+..+....+..
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~  236 (277)
T cd05036         157 VAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTG  236 (277)
T ss_pred             ceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence            589999998876532211   112233457999999987788999999999999999996 9999998777666655544


Q ss_pred             C
Q psy8825          82 H   82 (92)
Q Consensus        82 ~   82 (92)
                      .
T Consensus       237 ~  237 (277)
T cd05036         237 G  237 (277)
T ss_pred             C
Confidence            3

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.20  E-value=7e-11  Score=67.76  Aligned_cols=81  Identities=14%  Similarity=0.213  Sum_probs=60.3

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhcc-----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILY-----QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~-----~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      ++++.+++.|||.+...... .......|+..|++||.+..     ..++.+.|+|++|++++++++|..||........
T Consensus       147 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~  226 (275)
T cd06608         147 TKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA  226 (275)
T ss_pred             ccCCeEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH
Confidence            56778999999987665433 23344578889999998743     2356779999999999999999999987665555


Q ss_pred             HHHHHhC
Q psy8825          76 FAAITDH   82 (92)
Q Consensus        76 ~~~i~~~   82 (92)
                      ...+...
T Consensus       227 ~~~~~~~  233 (275)
T cd06608         227 LFKIPRN  233 (275)
T ss_pred             HHHhhcc
Confidence            5555543

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.20  E-value=8.8e-11  Score=67.34  Aligned_cols=80  Identities=21%  Similarity=0.243  Sum_probs=60.6

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCH--HHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE--EELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~--~~~~~~   78 (92)
                      +.++.+++.|||.+....... ......|+..|++||......++.+.|+|++|++++++++|..||.+...  .+...+
T Consensus       140 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~  219 (267)
T cd08229         140 TATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK  219 (267)
T ss_pred             cCCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhh
Confidence            456789999999876654432 23345788899999999888888889999999999999999999976532  344444


Q ss_pred             HHh
Q psy8825          79 ITD   81 (92)
Q Consensus        79 i~~   81 (92)
                      +..
T Consensus       220 ~~~  222 (267)
T cd08229         220 IEQ  222 (267)
T ss_pred             hhc
Confidence            443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG0193|consensus

Probab=99.20  E-value=8e-12  Score=77.94  Aligned_cols=81  Identities=14%  Similarity=0.287  Sum_probs=64.4

Q ss_pred             CCCCccccCCCcccccc---CCCCCCCCCCcCCcCccchhhcc---CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKI---RPGRGSNPRPSAYSILLFQIILY---QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~---~~~~~~~~~~g~~~~~~pe~~~~---~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      -+++.+|+.|||++..-   ..........|...|||||+++.   ..|+.+.|+|++|++.||+++|..||...+...+
T Consensus       522 ~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqI  601 (678)
T KOG0193|consen  522 HEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQI  601 (678)
T ss_pred             ccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhhe
Confidence            35688999999986332   23344556678889999999874   4689999999999999999999999997777777


Q ss_pred             HHHHHhC
Q psy8825          76 FAAITDH   82 (92)
Q Consensus        76 ~~~i~~~   82 (92)
                      +.++-++
T Consensus       602 ifmVGrG  608 (678)
T KOG0193|consen  602 IFMVGRG  608 (678)
T ss_pred             EEEeccc
Confidence            7776665

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.20  E-value=1.1e-10  Score=67.39  Aligned_cols=80  Identities=16%  Similarity=0.220  Sum_probs=62.7

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+++.|||.+....... ......++..|++||.+... .++.+.|+|++|++++++++|..+|.+.+..+.+.++
T Consensus       132 ~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~  211 (283)
T cd05118         132 NTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKI  211 (283)
T ss_pred             CCCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            456788999999887665543 33345678899999998765 5788899999999999999999999887776665555


Q ss_pred             Hh
Q psy8825          80 TD   81 (92)
Q Consensus        80 ~~   81 (92)
                      .+
T Consensus       212 ~~  213 (283)
T cd05118         212 FR  213 (283)
T ss_pred             HH
Confidence            43

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.20  E-value=1.2e-10  Score=65.84  Aligned_cols=79  Identities=15%  Similarity=0.275  Sum_probs=61.8

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.++|.|||.+.............++..|++||.+....++.+.|+|++|++++++++|..||...+.......+.
T Consensus       132 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~  210 (253)
T cd05122         132 TSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIA  210 (253)
T ss_pred             ccCCeEEEeeccccccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHH
Confidence            3567789999998876655433455678889999999887777888999999999999999999998775544444443

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.20  E-value=2.4e-10  Score=66.92  Aligned_cols=78  Identities=17%  Similarity=0.399  Sum_probs=58.6

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+|+.|||.+........   .....++..|++||.+.+..++.+.|+|++|++++++++ |..||.+....+...
T Consensus       143 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~  222 (303)
T cd05110         143 KSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPD  222 (303)
T ss_pred             cCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            4567789999999876643322   222345678999999888888889999999999999997 889998776554443


Q ss_pred             HH
Q psy8825          78 AI   79 (92)
Q Consensus        78 ~i   79 (92)
                      .+
T Consensus       223 ~~  224 (303)
T cd05110         223 LL  224 (303)
T ss_pred             HH
Confidence            33

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.19  E-value=1.5e-10  Score=66.88  Aligned_cols=79  Identities=19%  Similarity=0.277  Sum_probs=59.2

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+++.|||.+...... .......++..|++||.+... .++.+.|+|++|++++++++|..||.+.+....+..+
T Consensus       133 ~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~  212 (283)
T cd07835         133 DREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRI  212 (283)
T ss_pred             cCCCcEEEeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            45778999999988655433 223334668889999987654 4678899999999999999999999887665554444


Q ss_pred             H
Q psy8825          80 T   80 (92)
Q Consensus        80 ~   80 (92)
                      .
T Consensus       213 ~  213 (283)
T cd07835         213 F  213 (283)
T ss_pred             H
Confidence            3

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.19  E-value=9.3e-11  Score=66.87  Aligned_cols=82  Identities=20%  Similarity=0.253  Sum_probs=63.6

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+++.|||.+....... ......|+..|++||...+..++.+.|+|++|++++++++|..||...+..+....+.
T Consensus       135 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~  214 (256)
T cd08218         135 TKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKII  214 (256)
T ss_pred             cCCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHh
Confidence            456778999999886654332 2223467888999999877777888999999999999999999998877777666665


Q ss_pred             hCC
Q psy8825          81 DHS   83 (92)
Q Consensus        81 ~~~   83 (92)
                      .+.
T Consensus       215 ~~~  217 (256)
T cd08218         215 RGS  217 (256)
T ss_pred             cCC
Confidence            554

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.19  E-value=8.3e-11  Score=68.02  Aligned_cols=80  Identities=21%  Similarity=0.350  Sum_probs=60.4

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      ++++.+++.|||.+...... .......++..|++||.+.+. .++.+.|+|++|++++++++|.++|.+....+...++
T Consensus       134 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~  213 (286)
T cd07846         134 SQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHI  213 (286)
T ss_pred             CCCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHH
Confidence            46778999999988665433 233345678899999987653 3577899999999999999999999877765555444


Q ss_pred             Hh
Q psy8825          80 TD   81 (92)
Q Consensus        80 ~~   81 (92)
                      .+
T Consensus       214 ~~  215 (286)
T cd07846         214 IK  215 (286)
T ss_pred             HH
Confidence            43

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.19  E-value=9.4e-11  Score=67.21  Aligned_cols=80  Identities=21%  Similarity=0.236  Sum_probs=60.6

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCC--HHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED--EEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~--~~~~~~~   78 (92)
                      +.++.+++.|||.+....... ......|+..|++||.+.+..++.+.|+|++|++++++++|..||....  ..+....
T Consensus       140 ~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~  219 (267)
T cd08228         140 TATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQK  219 (267)
T ss_pred             cCCCCEEECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHH
Confidence            456789999999876654332 2334578889999999887778889999999999999999999987643  2344444


Q ss_pred             HHh
Q psy8825          79 ITD   81 (92)
Q Consensus        79 i~~   81 (92)
                      +..
T Consensus       220 ~~~  222 (267)
T cd08228         220 IEQ  222 (267)
T ss_pred             Hhc
Confidence            444

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>KOG0603|consensus

Probab=99.19  E-value=1e-11  Score=77.44  Aligned_cols=82  Identities=21%  Similarity=0.389  Sum_probs=68.7

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      |..+|.+++.|||.++-.......   |||..||+||+++  +.....|+|++|.+.+++++|..||.+    ++..+|.
T Consensus       130 ld~~Ghi~~tdfglske~v~~~~~---cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il  200 (612)
T KOG0603|consen  130 LLLEGHIKLTDFGLSKEAVKEKIA---CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRIL  200 (612)
T ss_pred             ecccCccccCCchhhhHhHhhhhc---ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHh
Confidence            356789999999998766554333   9999999999987  556778999999999999999999998    7778888


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      ...+.+|.+++
T Consensus       201 ~~~~~~p~~l~  211 (612)
T KOG0603|consen  201 KAELEMPRELS  211 (612)
T ss_pred             hhccCCchhhh
Confidence            88888887764

>KOG0606|consensus

Probab=99.19  E-value=3.6e-11  Score=78.97  Aligned_cols=87  Identities=31%  Similarity=0.553  Sum_probs=74.2

Q ss_pred             CCccccCCCccccccCCCC----------------CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCC
Q psy8825           4 SQPFRERTLSHQDKIRPGR----------------GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPF   67 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~----------------~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~   67 (92)
                      -|.+|+.|||++++.....                ..+.+|||+.|.+||++.-.+|+..+|+|++|+++|+.+.|+.||
T Consensus       179 mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpf  258 (1205)
T KOG0606|consen  179 MGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPF  258 (1205)
T ss_pred             cccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeec
Confidence            4689999999865442110                134569999999999999899999999999999999999999999


Q ss_pred             CCCCHHHHHHHHHhCCCcCCCCC
Q psy8825          68 DGEDEEELFAAITDHSVSYPKMA   90 (92)
Q Consensus        68 ~~~~~~~~~~~i~~~~~~~p~~~   90 (92)
                      .++.+.+++..++++...+|+..
T Consensus       259 fGdtpeelfg~visd~i~wpE~d  281 (1205)
T KOG0606|consen  259 FGDTPEELFGQVISDDIEWPEED  281 (1205)
T ss_pred             cCCCHHHHHhhhhhhhccccccC
Confidence            99999999999999998888764

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.19  E-value=1.5e-10  Score=67.76  Aligned_cols=81  Identities=19%  Similarity=0.374  Sum_probs=62.2

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+|+.|||.+........   .....++..|++||.+.+..++.+.|+|++|++++++++ |..||.+.+..+...
T Consensus       171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~  250 (304)
T cd05101         171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK  250 (304)
T ss_pred             cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHH
Confidence            4567889999999876643221   222345678999999887778889999999999999998 788998887777766


Q ss_pred             HHHhC
Q psy8825          78 AITDH   82 (92)
Q Consensus        78 ~i~~~   82 (92)
                      .+...
T Consensus       251 ~~~~~  255 (304)
T cd05101         251 LLKEG  255 (304)
T ss_pred             HHHcC
Confidence            66554

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.19  E-value=1.2e-10  Score=67.20  Aligned_cols=68  Identities=13%  Similarity=0.235  Sum_probs=54.2

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc----CCCCchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY----QPYGKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~----~~~~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      +.++.+|+.|||.+.............|+..|++||.+.+    ..++.+.|+|++|++++++++|..||..
T Consensus       138 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  209 (283)
T cd06617         138 NRNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDS  209 (283)
T ss_pred             CCCCCEEEeecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCc
Confidence            4567899999999877654433344678889999998754    3457789999999999999999999965

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.18  E-value=1.3e-10  Score=67.09  Aligned_cols=80  Identities=21%  Similarity=0.297  Sum_probs=62.3

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+++.|||.+.............++..|++||.+.. ..++.+.|+|++|++++++++|..+|.+....+.+.++.
T Consensus       133 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~  212 (283)
T cd07830         133 SGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKIC  212 (283)
T ss_pred             cCCCCEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHH
Confidence            4567889999998876655445555678889999998743 446788999999999999999999998877666555544


Q ss_pred             h
Q psy8825          81 D   81 (92)
Q Consensus        81 ~   81 (92)
                      +
T Consensus       213 ~  213 (283)
T cd07830         213 S  213 (283)
T ss_pred             H
Confidence            3

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.18  E-value=2.7e-10  Score=65.40  Aligned_cols=76  Identities=18%  Similarity=0.350  Sum_probs=58.8

Q ss_pred             ccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHh
Q psy8825           6 PFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~i~~   81 (92)
                      .+++.|||.+........   .....++..|++||.+....++.+.|+|++|++++++++ |..||...+..+....+..
T Consensus       149 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~  228 (269)
T cd05044         149 VVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTA  228 (269)
T ss_pred             ceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhc
Confidence            789999999876643321   122345678999999988788899999999999999998 9999988777666655544

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.18  E-value=1.7e-10  Score=66.65  Aligned_cols=81  Identities=21%  Similarity=0.382  Sum_probs=62.1

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.+..+|+.|||.++.+....   ......++..|++||.+....++.+.|+|++|++++++++ |..||...+..+...
T Consensus       151 ~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~  230 (280)
T cd05043         151 DEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAA  230 (280)
T ss_pred             cCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHH
Confidence            456778999999987654332   1123345667999999887778889999999999999998 999998887777665


Q ss_pred             HHHhC
Q psy8825          78 AITDH   82 (92)
Q Consensus        78 ~i~~~   82 (92)
                      .+..+
T Consensus       231 ~~~~~  235 (280)
T cd05043         231 YLKDG  235 (280)
T ss_pred             HHHcC
Confidence            55543

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.18  E-value=1.4e-10  Score=65.97  Aligned_cols=80  Identities=19%  Similarity=0.330  Sum_probs=63.1

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH   82 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~   82 (92)
                      .++.+|+.|||.+...... ......++..|++||.+....++.+.|+|++|+++++++.|..||...+..+....+...
T Consensus       138 ~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~  216 (256)
T cd08530         138 ANDLVKIGDLGISKVLKKN-MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRG  216 (256)
T ss_pred             cCCcEEEeeccchhhhccC-CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC
Confidence            4567899999988665444 333456888999999998877888899999999999999999999988776665555544


Q ss_pred             C
Q psy8825          83 S   83 (92)
Q Consensus        83 ~   83 (92)
                      .
T Consensus       217 ~  217 (256)
T cd08530         217 K  217 (256)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.18  E-value=1.3e-10  Score=66.29  Aligned_cols=69  Identities=22%  Similarity=0.448  Sum_probs=57.6

Q ss_pred             CCCCccccCCCcccccc-CCCCCCCCCCcCCcCccchhhc-cCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKI-RPGRGSNPRPSAYSILLFQIIL-YQPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~-~~~~~~~~~~g~~~~~~pe~~~-~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      ++++.++|.|||.+... ..........++..|++||... ...+..+.|+|++|++++++++|..||...
T Consensus       132 ~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~  202 (260)
T PF00069_consen  132 DENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES  202 (260)
T ss_dssp             STTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            45678899999998663 2334555678899999999987 667789999999999999999999999887

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.18  E-value=1.7e-10  Score=68.34  Aligned_cols=81  Identities=20%  Similarity=0.379  Sum_probs=62.0

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+||.|||.+........   .....++..|++||.+....++.+.|+|++|++++++++ |..||.+.+..+...
T Consensus       168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~  247 (334)
T cd05100         168 TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK  247 (334)
T ss_pred             cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            4577899999998866543221   122234567999999988888889999999999999998 889998888777766


Q ss_pred             HHHhC
Q psy8825          78 AITDH   82 (92)
Q Consensus        78 ~i~~~   82 (92)
                      .+...
T Consensus       248 ~~~~~  252 (334)
T cd05100         248 LLKEG  252 (334)
T ss_pred             HHHcC
Confidence            66554

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.18  E-value=1.3e-10  Score=70.72  Aligned_cols=71  Identities=18%  Similarity=0.318  Sum_probs=54.9

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDE   72 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~   72 (92)
                      +.+..+|+.|||.+.......   ......++..|++||.+.+..++.+.|+|++|++++++++ |..||.....
T Consensus       271 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~  345 (400)
T cd05105         271 AQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIV  345 (400)
T ss_pred             eCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccch
Confidence            345678999999987654332   2233456778999999888788889999999999999997 8889876543

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.18  E-value=6.5e-11  Score=67.76  Aligned_cols=68  Identities=16%  Similarity=0.232  Sum_probs=55.5

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      +.++.+++.|||.+......... ...++..|++||.+.+..++.+.|+|++|++++++++|..||...
T Consensus       135 ~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~  202 (265)
T cd06605         135 NSRGQIKLCDFGVSGQLVNSLAK-TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPE  202 (265)
T ss_pred             CCCCCEEEeecccchhhHHHHhh-cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence            45678999999987665433222 277888999999998888889999999999999999999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.18  E-value=2.9e-10  Score=64.86  Aligned_cols=79  Identities=13%  Similarity=0.291  Sum_probs=60.4

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+++.|||.+........  ....+..|++||.+....++.+.|+|++|++++++++ |..||...+..+....+.
T Consensus       136 ~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~  213 (256)
T cd05039         136 SEDLVAKVSDFGLAKEASQGQD--SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVE  213 (256)
T ss_pred             eCCCCEEEcccccccccccccc--cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Confidence            4567889999998876633322  2334567999999877778888999999999999997 999998877766665555


Q ss_pred             hC
Q psy8825          81 DH   82 (92)
Q Consensus        81 ~~   82 (92)
                      ..
T Consensus       214 ~~  215 (256)
T cd05039         214 KG  215 (256)
T ss_pred             cC
Confidence            43

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>KOG1989|consensus

Probab=99.17  E-value=3.7e-11  Score=76.83  Aligned_cols=85  Identities=19%  Similarity=0.299  Sum_probs=63.3

Q ss_pred             CCCCCccccCCCccccccCCCCC-CCC---------CCcCCcCccchhh---ccCCCCchhhHHhHHHHHHHHHhCCCCC
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRG-SNP---------RPSAYSILLFQII---LYQPYGKSVDWWAYGVLLYEMLVGQPPF   67 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~-~~~---------~~g~~~~~~pe~~---~~~~~~~~~~~ws~g~~~~~~~~g~~p~   67 (92)
                      ++.++.+||+|||.+.......+ ...         ..=|+.|.+||.+   .+...+.+.|||.+||++|.++....||
T Consensus       179 ls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PF  258 (738)
T KOG1989|consen  179 LSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPF  258 (738)
T ss_pred             EcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCc
Confidence            45678999999998866554432 111         1347899999987   3456789999999999999999999999


Q ss_pred             CCCCHHHHHHHHHhCCCcCCCC
Q psy8825          68 DGEDEEELFAAITDHSVSYPKM   89 (92)
Q Consensus        68 ~~~~~~~~~~~i~~~~~~~p~~   89 (92)
                      ...-    -..|..+.|.+|.+
T Consensus       259 e~sg----~laIlng~Y~~P~~  276 (738)
T KOG1989|consen  259 EESG----KLAILNGNYSFPPF  276 (738)
T ss_pred             CcCc----ceeEEeccccCCCC
Confidence            7542    23567777777764

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.17  E-value=3e-10  Score=65.62  Aligned_cols=81  Identities=17%  Similarity=0.337  Sum_probs=61.7

Q ss_pred             CCCCccccCCCccccccCCCCCCCC---CCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNP---RPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~---~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      ..++.+||.|||.+...........   ..++..|++||......++.+.|+|++|++++++++ |..||.+....+...
T Consensus       143 ~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~  222 (279)
T cd05057         143 KTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPD  222 (279)
T ss_pred             cCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Confidence            3567789999998876653322111   223457999999877778889999999999999998 999999888777766


Q ss_pred             HHHhC
Q psy8825          78 AITDH   82 (92)
Q Consensus        78 ~i~~~   82 (92)
                      .+...
T Consensus       223 ~~~~~  227 (279)
T cd05057         223 LLEKG  227 (279)
T ss_pred             HHhCC
Confidence            66654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.17  E-value=1.5e-10  Score=69.76  Aligned_cols=80  Identities=19%  Similarity=0.334  Sum_probs=57.5

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.+..+|+.|||.+........   .....++..|++||.+....++.+.|+|++|++++++++ |..||.+......+.
T Consensus       248 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~  327 (375)
T cd05104         248 THGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFY  327 (375)
T ss_pred             ECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHH
Confidence            3456789999999876543321   112234567999999988888899999999999999997 888998765443333


Q ss_pred             HHHh
Q psy8825          78 AITD   81 (92)
Q Consensus        78 ~i~~   81 (92)
                      ++..
T Consensus       328 ~~~~  331 (375)
T cd05104         328 KMIK  331 (375)
T ss_pred             HHHH
Confidence            3333

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.17  E-value=1.1e-10  Score=67.30  Aligned_cols=63  Identities=27%  Similarity=0.423  Sum_probs=52.6

Q ss_pred             ccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           6 PFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      .+++.|||.+......   ....++..|++||.+....++.+.|+|++|++++++++|..||....
T Consensus       148 ~~~l~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~  210 (267)
T PHA03390        148 RIYLCDYGLCKIIGTP---SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDE  210 (267)
T ss_pred             eEEEecCccceecCCC---ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence            7899999988665433   23468889999999988788888999999999999999999997543

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.17  E-value=2.8e-10  Score=66.06  Aligned_cols=82  Identities=26%  Similarity=0.441  Sum_probs=62.1

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+++.|||.+........   .....++..|++||...+..++.+.|+|++|++++++++ +..||.+....+...
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~  243 (288)
T cd05050         164 GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIY  243 (288)
T ss_pred             cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            4677899999998865533221   222334567999999887788889999999999999997 778998877777776


Q ss_pred             HHHhCC
Q psy8825          78 AITDHS   83 (92)
Q Consensus        78 ~i~~~~   83 (92)
                      .+..+.
T Consensus       244 ~~~~~~  249 (288)
T cd05050         244 YVRDGN  249 (288)
T ss_pred             HHhcCC
Confidence            666554

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.17  E-value=1.8e-10  Score=66.52  Aligned_cols=80  Identities=21%  Similarity=0.353  Sum_probs=61.3

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+++.|||.+.......  ......++..|++||.+.+ ..++.+.|+|++|++++++++|..||.+.+.......
T Consensus       134 ~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~  213 (287)
T cd07840         134 NNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEK  213 (287)
T ss_pred             cCCCCEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence            457789999999887665443  2334567888999997654 3467889999999999999999999988776655555


Q ss_pred             HHh
Q psy8825          79 ITD   81 (92)
Q Consensus        79 i~~   81 (92)
                      +..
T Consensus       214 ~~~  216 (287)
T cd07840         214 IFE  216 (287)
T ss_pred             HHH
Confidence            443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.17  E-value=1.5e-10  Score=66.90  Aligned_cols=80  Identities=19%  Similarity=0.279  Sum_probs=61.0

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+++.|||.+.......  ......|+..|++||.+... .++.+.|+|++|++++++++|.++|.+......+.+
T Consensus       133 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~  212 (286)
T cd07832         133 SADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAI  212 (286)
T ss_pred             cCCCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHH
Confidence            346678999999887664432  24456788999999987654 357889999999999999999888888776655555


Q ss_pred             HHh
Q psy8825          79 ITD   81 (92)
Q Consensus        79 i~~   81 (92)
                      +..
T Consensus       213 ~~~  215 (286)
T cd07832         213 VFR  215 (286)
T ss_pred             HHH
Confidence            443

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.16  E-value=2.7e-10  Score=67.85  Aligned_cols=78  Identities=22%  Similarity=0.343  Sum_probs=60.4

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+++.|||.+.....  ......++..|++||.+.+ ..++.+.|+|++|++++++++|..||.+.+.......+.
T Consensus       152 ~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~  229 (343)
T cd07880         152 NEDCELKILDFGLARQTDS--EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIM  229 (343)
T ss_pred             cCCCCEEEeeccccccccc--CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            4567899999998865432  2334567889999998865 346788999999999999999999999877665555554


Q ss_pred             h
Q psy8825          81 D   81 (92)
Q Consensus        81 ~   81 (92)
                      .
T Consensus       230 ~  230 (343)
T cd07880         230 K  230 (343)
T ss_pred             H
Confidence            4

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.16  E-value=1.3e-10  Score=68.95  Aligned_cols=80  Identities=21%  Similarity=0.285  Sum_probs=60.4

Q ss_pred             CCCCccccCCCccccccCCCC------CCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR------GSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE   74 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~------~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~   74 (92)
                      +.++.+|+.|||.+.......      ......|+..|++||.+.. ..++...|+|++|++++++++|..||.+....+
T Consensus       141 ~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~  220 (337)
T cd07852         141 NSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN  220 (337)
T ss_pred             cCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH
Confidence            567889999999886654322      2233568889999998754 346778999999999999999999998876665


Q ss_pred             HHHHHHh
Q psy8825          75 LFAAITD   81 (92)
Q Consensus        75 ~~~~i~~   81 (92)
                      ...++..
T Consensus       221 ~~~~~~~  227 (337)
T cd07852         221 QLEKIIE  227 (337)
T ss_pred             HHHHHHH
Confidence            5555444

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.16  E-value=9.9e-11  Score=68.27  Aligned_cols=74  Identities=20%  Similarity=0.420  Sum_probs=58.8

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      ++++.+++.|||.+....... ......|+..|++||.+....++.+.|+|++|++++++++|..||.+.+..+.
T Consensus       149 ~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~  223 (293)
T cd06647         149 GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA  223 (293)
T ss_pred             cCCCCEEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh
Confidence            456788999999876665443 23345688899999998777788899999999999999999999987655443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.16  E-value=2.8e-10  Score=65.44  Aligned_cols=81  Identities=14%  Similarity=0.349  Sum_probs=59.5

Q ss_pred             CCCCccccCCCccccccCCCCCC---CCCCc---CCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGS---NPRPS---AYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEE   74 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~---~~~~g---~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~   74 (92)
                      +.+..+|+.|||.+.........   ....+   +..|++||.+....++.+.|+|++|++++++++ |..||...+..+
T Consensus       140 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~  219 (269)
T cd05065         140 NSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD  219 (269)
T ss_pred             cCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH
Confidence            34567899999987655433211   11111   346999999888888889999999999999886 999998877777


Q ss_pred             HHHHHHhC
Q psy8825          75 LFAAITDH   82 (92)
Q Consensus        75 ~~~~i~~~   82 (92)
                      ....+...
T Consensus       220 ~~~~i~~~  227 (269)
T cd05065         220 VINAIEQD  227 (269)
T ss_pred             HHHHHHcC
Confidence            76666543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.16  E-value=3.5e-10  Score=65.72  Aligned_cols=81  Identities=15%  Similarity=0.287  Sum_probs=61.5

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+++.|||.+.......   ......++..|++||.+....++.+.|+|++|++++++++ +..||.+....+...
T Consensus       153 ~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~  232 (288)
T cd05061         153 AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK  232 (288)
T ss_pred             cCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            456788999999887553322   1222345667999999887778889999999999999998 788998877777766


Q ss_pred             HHHhC
Q psy8825          78 AITDH   82 (92)
Q Consensus        78 ~i~~~   82 (92)
                      .+..+
T Consensus       233 ~~~~~  237 (288)
T cd05061         233 FVMDG  237 (288)
T ss_pred             HHHcC
Confidence            66544

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.16  E-value=2.3e-10  Score=66.42  Aligned_cols=89  Identities=21%  Similarity=0.388  Sum_probs=61.9

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccC--CCCchhhHHhHHHHHHHHHhCCCCCCCCC----HH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQ--PYGKSVDWWAYGVLLYEMLVGQPPFDGED----EE   73 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~--~~~~~~~~ws~g~~~~~~~~g~~p~~~~~----~~   73 (92)
                      +.++.+|+.|||.+.......  ......|+..|++||.+...  .++.+.|+|++|++++++++|..||....    ..
T Consensus       139 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~  218 (290)
T cd05613         139 DSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQA  218 (290)
T ss_pred             CCCCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHH
Confidence            567889999999887654332  22345788999999997642  35678999999999999999999986432    23


Q ss_pred             HHHHHHHhCCCcCCCCC
Q psy8825          74 ELFAAITDHSVSYPKMA   90 (92)
Q Consensus        74 ~~~~~i~~~~~~~p~~~   90 (92)
                      +....+.....++|..+
T Consensus       219 ~~~~~~~~~~~~~~~~~  235 (290)
T cd05613         219 EISRRILKSEPPYPQEM  235 (290)
T ss_pred             HHHHHhhccCCCCCccC
Confidence            33444444444555443

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.16  E-value=3e-10  Score=65.93  Aligned_cols=70  Identities=20%  Similarity=0.341  Sum_probs=53.9

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      +.++.+|++|||.+...... .......++..|++||.+.+ ..++.+.|+|++|++++++++|..||.+..
T Consensus       137 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~  208 (291)
T cd07844         137 SERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGST  208 (291)
T ss_pred             cCCCCEEECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence            45678999999987654322 22233456788999998765 446788999999999999999999997655

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.16  E-value=2.2e-10  Score=66.61  Aligned_cols=79  Identities=15%  Similarity=0.261  Sum_probs=61.0

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQP-YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~-~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+++.|||.+...... .......++..|++||.+.+.. ++.+.|+|++|++++++++|..||.+....+.+.++
T Consensus       140 ~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~  219 (293)
T cd07843         140 NNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKI  219 (293)
T ss_pred             CCCCcEEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            45678899999988766543 3334456788899999886543 578899999999999999999999987766665554


Q ss_pred             H
Q psy8825          80 T   80 (92)
Q Consensus        80 ~   80 (92)
                      .
T Consensus       220 ~  220 (293)
T cd07843         220 F  220 (293)
T ss_pred             H
Confidence            3

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.16  E-value=2.6e-10  Score=65.47  Aligned_cols=81  Identities=15%  Similarity=0.337  Sum_probs=60.4

Q ss_pred             CCCCccccCCCccccccCCCCC--CCC--CCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG--SNP--RPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~--~~~--~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~   76 (92)
                      +.+..+|+.|||.+........  ...  ...+..|++||.+....++.+.|+|++|++++++++ |..||...+..+..
T Consensus       141 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~  220 (268)
T cd05063         141 NSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVM  220 (268)
T ss_pred             cCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHH
Confidence            4567789999998866543221  111  122346999999887778889999999999999987 99999887777777


Q ss_pred             HHHHhC
Q psy8825          77 AAITDH   82 (92)
Q Consensus        77 ~~i~~~   82 (92)
                      ..+...
T Consensus       221 ~~i~~~  226 (268)
T cd05063         221 KAINDG  226 (268)
T ss_pred             HHHhcC
Confidence            666554

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.15  E-value=3.3e-10  Score=65.04  Aligned_cols=81  Identities=12%  Similarity=0.344  Sum_probs=61.8

Q ss_pred             CCCCccccCCCccccccCCC-CCCCC--CCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNP--RPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~--~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+++.|||.+...... ....+  ..++..|++||...+..++.+.|+|++|++++++++ |..||......+...
T Consensus       140 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~  219 (266)
T cd05033         140 NSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIK  219 (266)
T ss_pred             cCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHH
Confidence            45678899999988776422 11112  234567999999888888889999999999999997 999998877777766


Q ss_pred             HHHhC
Q psy8825          78 AITDH   82 (92)
Q Consensus        78 ~i~~~   82 (92)
                      .+...
T Consensus       220 ~~~~~  224 (266)
T cd05033         220 AVEDG  224 (266)
T ss_pred             HHHcC
Confidence            66654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.15  E-value=2.1e-10  Score=66.47  Aligned_cols=69  Identities=13%  Similarity=0.197  Sum_probs=55.6

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      +.++.+++.|||.+...... .....+|+..|++||.+....++.+.|+|++|++++++++|..||....
T Consensus       138 ~~~~~~~l~d~gl~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~  206 (284)
T cd06620         138 NSRGQIKLCDFGVSGELINS-IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSN  206 (284)
T ss_pred             CCCCcEEEccCCcccchhhh-ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccc
Confidence            45677899999987654222 2335678999999999877778889999999999999999999997644

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.15  E-value=3.4e-10  Score=67.06  Aligned_cols=80  Identities=18%  Similarity=0.299  Sum_probs=60.0

Q ss_pred             CCCCccccCCCccccccCCC---------------CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPG---------------RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQP   65 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~---------------~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~   65 (92)
                      +.++.+++.|||.+......               .......++..|++||.+.+. .++.+.|+|++|++++++++|..
T Consensus       153 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~  232 (335)
T PTZ00024        153 NSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKP  232 (335)
T ss_pred             CCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            45678899999987665411               112223567789999988654 35888999999999999999999


Q ss_pred             CCCCCCHHHHHHHHHh
Q psy8825          66 PFDGEDEEELFAAITD   81 (92)
Q Consensus        66 p~~~~~~~~~~~~i~~   81 (92)
                      ||.+.+..+.+.++.+
T Consensus       233 p~~~~~~~~~~~~i~~  248 (335)
T PTZ00024        233 LFPGENEIDQLGRIFE  248 (335)
T ss_pred             CCCCCCHHHHHHHHHH
Confidence            9998887766665544

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.15  E-value=2.5e-10  Score=66.35  Aligned_cols=77  Identities=19%  Similarity=0.248  Sum_probs=58.6

Q ss_pred             CCccccCCCccccccCCC-CCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           4 SQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      .+.+|+.|||.+...... .......+++.|++||.+.+ ..++.+.|+|++|++++++++|..||.+.+....+.++.
T Consensus       147 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~  225 (295)
T cd07837         147 KGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIF  225 (295)
T ss_pred             CCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence            568899999988765332 22333467888999998754 346888999999999999999999998877665554443

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.15  E-value=3.8e-10  Score=64.19  Aligned_cols=80  Identities=20%  Similarity=0.389  Sum_probs=59.1

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+|+.|||.+........   .....++..|++||.+.+..++.+.|+|++|++++++++ +..||.+........
T Consensus       127 ~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~  206 (251)
T cd05041         127 GENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRE  206 (251)
T ss_pred             cCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHH
Confidence            4567899999998865542211   112233556999999887778889999999999999998 888998877666555


Q ss_pred             HHHh
Q psy8825          78 AITD   81 (92)
Q Consensus        78 ~i~~   81 (92)
                      .+..
T Consensus       207 ~~~~  210 (251)
T cd05041         207 RIES  210 (251)
T ss_pred             HHhc
Confidence            5544

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.15  E-value=2.8e-10  Score=65.01  Aligned_cols=80  Identities=20%  Similarity=0.245  Sum_probs=61.3

Q ss_pred             CCCCccccCCCccccccCCCCCC-CCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC---CHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGS-NPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE---DEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~-~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~---~~~~~~~   77 (92)
                      +.++.++|.|||.+......... ....++..|++||......++.+.|+|++|++++++++|..||...   ...+...
T Consensus       134 ~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~  213 (264)
T cd06623         134 NSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQ  213 (264)
T ss_pred             CCCCCEEEccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHH
Confidence            45678899999988766544322 2456788999999988777788999999999999999999999776   3344444


Q ss_pred             HHHh
Q psy8825          78 AITD   81 (92)
Q Consensus        78 ~i~~   81 (92)
                      .+..
T Consensus       214 ~~~~  217 (264)
T cd06623         214 AICD  217 (264)
T ss_pred             HHhc
Confidence            4443

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG0666|consensus

Probab=99.15  E-value=4.5e-11  Score=70.23  Aligned_cols=82  Identities=20%  Similarity=0.286  Sum_probs=64.9

Q ss_pred             CCCccccCCCccccccCCC----CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCC------
Q psy8825           3 ESQPFRERTLSHQDKIRPG----RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGED------   71 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~----~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~------   71 (92)
                      +.|.+|+.|+|+++.+...    .....++-|.+|.|||.+.+. .|+...|+|+.||++-|+++..+.|.+..      
T Consensus       171 erG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~  250 (438)
T KOG0666|consen  171 ERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTK  250 (438)
T ss_pred             ccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccC
Confidence            4589999999999887543    234556789999999998876 47999999999999999999988887652      


Q ss_pred             ---HHHHHHHHHhCCC
Q psy8825          72 ---EEELFAAITDHSV   84 (92)
Q Consensus        72 ---~~~~~~~i~~~~~   84 (92)
                         +.+++.+|.+...
T Consensus       251 ~Pfq~dQl~rIf~vLG  266 (438)
T KOG0666|consen  251 NPFQHDQLDRIFEVLG  266 (438)
T ss_pred             CCchHHHHHHHHHHcC
Confidence               2466777776543

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.15  E-value=2.2e-10  Score=66.24  Aligned_cols=79  Identities=18%  Similarity=0.307  Sum_probs=59.7

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+++.|||.+....... ......++..|++||.+.+. .++.+.|+|++|++++++++|..||.+.+..+...++
T Consensus       134 ~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~  213 (284)
T cd07836         134 NKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKI  213 (284)
T ss_pred             CCCCcEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Confidence            456789999999886654332 23345678889999987653 4678899999999999999999999887765555444


Q ss_pred             H
Q psy8825          80 T   80 (92)
Q Consensus        80 ~   80 (92)
                      .
T Consensus       214 ~  214 (284)
T cd07836         214 F  214 (284)
T ss_pred             H
Confidence            3

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.15  E-value=1.9e-10  Score=66.65  Aligned_cols=80  Identities=20%  Similarity=0.335  Sum_probs=61.1

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      ..++.+++.|||.+...... .......++..|++||.+....++.+.|+|++|++++++++|..||...+.......+.
T Consensus       150 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~  229 (286)
T cd06614         150 SKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLIT  229 (286)
T ss_pred             cCCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            35678899999987655432 22334567889999999887778889999999999999999999998877655544444


Q ss_pred             h
Q psy8825          81 D   81 (92)
Q Consensus        81 ~   81 (92)
                      .
T Consensus       230 ~  230 (286)
T cd06614         230 T  230 (286)
T ss_pred             h
Confidence            3

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.15  E-value=4.9e-10  Score=63.91  Aligned_cols=81  Identities=19%  Similarity=0.393  Sum_probs=60.2

Q ss_pred             CCCCccccCCCccccccCCCCC--CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG--SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~--~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+++.|||.+........  .....++..|++||...+..++.+.|+|++|++++++++ |..||......+....
T Consensus       134 ~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~  213 (256)
T cd05112         134 GENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVET  213 (256)
T ss_pred             cCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHH
Confidence            3456789999998765433211  112234567999999887778889999999999999998 8999988777666666


Q ss_pred             HHhC
Q psy8825          79 ITDH   82 (92)
Q Consensus        79 i~~~   82 (92)
                      +..+
T Consensus       214 ~~~~  217 (256)
T cd05112         214 INAG  217 (256)
T ss_pred             HhCC
Confidence            6554

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.15  E-value=1.7e-10  Score=66.50  Aligned_cols=75  Identities=16%  Similarity=0.304  Sum_probs=58.6

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~   76 (92)
                      +.++.+++.|||.+....... ......|+..|++||.+.. ..++.+.|+|++|++++++++|..||.+.......
T Consensus       135 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~  211 (277)
T cd06917         135 TNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAM  211 (277)
T ss_pred             cCCCCEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhh
Confidence            456788999999887765443 3344578889999998764 34578899999999999999999999877655443

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.15  E-value=3.7e-10  Score=64.96  Aligned_cols=81  Identities=15%  Similarity=0.329  Sum_probs=60.9

Q ss_pred             CCCCccccCCCccccccCCCCCCC--CCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSN--PRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~--~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+++.|||.+..........  ...+...|++||.+....++.+.|+|++|++++++++ |..||.+....+....
T Consensus       141 ~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~  220 (270)
T cd05056         141 SSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGR  220 (270)
T ss_pred             ecCCCeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence            345678999999886654432211  2233457999999877778889999999999999886 9999988877776666


Q ss_pred             HHhC
Q psy8825          79 ITDH   82 (92)
Q Consensus        79 i~~~   82 (92)
                      +..+
T Consensus       221 ~~~~  224 (270)
T cd05056         221 IENG  224 (270)
T ss_pred             HHcC
Confidence            6554

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.15  E-value=3e-10  Score=66.10  Aligned_cols=77  Identities=19%  Similarity=0.277  Sum_probs=58.4

Q ss_pred             CCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           4 SQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +..+|+.|||.+...... .......++..|++||.+.+. .++.+.|+|++|++++++++|..||.+.+..+.+.++.
T Consensus       139 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~  217 (294)
T PLN00009        139 TNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIF  217 (294)
T ss_pred             CCEEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            346899999988665433 223345678899999987654 46788999999999999999999998877665555543

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.15  E-value=5.2e-10  Score=63.65  Aligned_cols=82  Identities=17%  Similarity=0.336  Sum_probs=62.5

Q ss_pred             CCCCccccCCCccccccCCCCCCCC--CCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNP--RPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~--~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+++.|||.+...........  ..++..|++||......++.+.|+|++|++++++++ |..||.+.+.......
T Consensus       137 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~  216 (258)
T smart00219      137 GENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEY  216 (258)
T ss_pred             ccCCeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            4566899999998866654422211  236678999999877778889999999999999998 8889988777777666


Q ss_pred             HHhCC
Q psy8825          79 ITDHS   83 (92)
Q Consensus        79 i~~~~   83 (92)
                      +....
T Consensus       217 ~~~~~  221 (258)
T smart00219      217 LKKGY  221 (258)
T ss_pred             HhcCC
Confidence            66543

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.15  E-value=4.4e-10  Score=64.62  Aligned_cols=80  Identities=11%  Similarity=0.252  Sum_probs=57.0

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhcc-------CCCCchhhHHhHHHHHHHHHh-CCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILY-------QPYGKSVDWWAYGVLLYEMLV-GQPPFDGE   70 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~-------~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~   70 (92)
                      +.++.+|+.|||.+.......   ......++..|++||+...       ..++.+.|+|++|++++++++ |..||...
T Consensus       134 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~  213 (269)
T cd05042         134 TADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDL  213 (269)
T ss_pred             cCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcC
Confidence            467789999999875543321   1223345667999998642       245678999999999999998 78899887


Q ss_pred             CHHHHHHHHHh
Q psy8825          71 DEEELFAAITD   81 (92)
Q Consensus        71 ~~~~~~~~i~~   81 (92)
                      ...+.+..+..
T Consensus       214 ~~~~~~~~~~~  224 (269)
T cd05042         214 SDEQVLKQVVR  224 (269)
T ss_pred             CHHHHHHHHhh
Confidence            76665555443

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.14  E-value=3.3e-10  Score=65.32  Aligned_cols=80  Identities=19%  Similarity=0.282  Sum_probs=61.2

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+++.|||.+....... ......++..|++||.+... .++.+.|+|++|++++++++|..||.+.+..+.+.++
T Consensus       132 ~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~  211 (282)
T cd07829         132 NRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKI  211 (282)
T ss_pred             cCCCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHH
Confidence            356788999999887664432 33344567789999998665 6788899999999999999999999887766655554


Q ss_pred             Hh
Q psy8825          80 TD   81 (92)
Q Consensus        80 ~~   81 (92)
                      .+
T Consensus       212 ~~  213 (282)
T cd07829         212 FQ  213 (282)
T ss_pred             HH
Confidence            43

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.14  E-value=2.9e-10  Score=65.72  Aligned_cols=81  Identities=15%  Similarity=0.240  Sum_probs=62.3

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+++.|||.+..+... .......++..|++||.+....++.+.|+|++|++++++++|..|+...........+.
T Consensus       135 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~  214 (277)
T cd06641         135 SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIP  214 (277)
T ss_pred             CCCCCEEEeecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHh
Confidence            35677899999987665433 23344578889999999877777888999999999999999999998776655555554


Q ss_pred             hC
Q psy8825          81 DH   82 (92)
Q Consensus        81 ~~   82 (92)
                      ..
T Consensus       215 ~~  216 (277)
T cd06641         215 KN  216 (277)
T ss_pred             cC
Confidence            43

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.13  E-value=5e-10  Score=65.98  Aligned_cols=79  Identities=18%  Similarity=0.268  Sum_probs=59.8

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhc---cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIIL---YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~---~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+++.|||.+.....   .....|+..|++||.+.   ...++.+.|+|++|++++++++|..||...+.......
T Consensus       159 ~~~~~~kl~dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~  235 (317)
T cd06635         159 TEPGQVKLADFGSASIASP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH  235 (317)
T ss_pred             CCCCCEEEecCCCccccCC---cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence            3567899999998754332   23457888999999874   34567789999999999999999999988776666555


Q ss_pred             HHhCC
Q psy8825          79 ITDHS   83 (92)
Q Consensus        79 i~~~~   83 (92)
                      +....
T Consensus       236 ~~~~~  240 (317)
T cd06635         236 IAQNE  240 (317)
T ss_pred             HHhcc
Confidence            55543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.13  E-value=2.1e-10  Score=66.42  Aligned_cols=78  Identities=14%  Similarity=0.205  Sum_probs=58.4

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhcc-----CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILY-----QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~-----~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      +.++.+++.|||.+...... .......|+..|++||.+..     ..++.+.|+|++|++++++++|..|+...+....
T Consensus       158 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~  237 (286)
T cd06638         158 TTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA  237 (286)
T ss_pred             CCCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH
Confidence            45677899999988665433 23344578999999998753     3467789999999999999999999987665444


Q ss_pred             HHHH
Q psy8825          76 FAAI   79 (92)
Q Consensus        76 ~~~i   79 (92)
                      +..+
T Consensus       238 ~~~~  241 (286)
T cd06638         238 LFKI  241 (286)
T ss_pred             Hhhc
Confidence            4433

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.13  E-value=6.7e-10  Score=63.40  Aligned_cols=79  Identities=16%  Similarity=0.279  Sum_probs=60.2

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+|+.|||.+......  .........|++||.+....++.+.|+|++|++++++++ |..||...+..+....+.
T Consensus       134 ~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~  211 (254)
T cd05083         134 SEDGVAKVSDFGLARVGSMG--VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVE  211 (254)
T ss_pred             cCCCcEEECCCccceecccc--CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh
Confidence            35678899999987554322  122334567999999887778889999999999999997 999998887776666665


Q ss_pred             hC
Q psy8825          81 DH   82 (92)
Q Consensus        81 ~~   82 (92)
                      ++
T Consensus       212 ~~  213 (254)
T cd05083         212 KG  213 (254)
T ss_pred             CC
Confidence            54

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.13  E-value=2.7e-10  Score=64.70  Aligned_cols=81  Identities=20%  Similarity=0.272  Sum_probs=64.1

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+++.|||.+....... ......|++.|++||......++.+.|+|++|+++++++.|..||...+..+....+.
T Consensus       137 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~  216 (258)
T cd08215         137 TSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKIL  216 (258)
T ss_pred             cCCCcEEECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHh
Confidence            345778999999886664443 3344578889999999877778888999999999999999999998877766666655


Q ss_pred             hC
Q psy8825          81 DH   82 (92)
Q Consensus        81 ~~   82 (92)
                      ..
T Consensus       217 ~~  218 (258)
T cd08215         217 KG  218 (258)
T ss_pred             cC
Confidence            54

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.13  E-value=3.1e-10  Score=66.53  Aligned_cols=76  Identities=18%  Similarity=0.284  Sum_probs=57.9

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhc---cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIIL---YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~---~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+++.|||.+......   ....++..|++||.+.   ...++.+.|+|++|++++++++|..||.+.+.......
T Consensus       149 ~~~~~~kL~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~  225 (307)
T cd06607         149 TEPGTVKLADFGSASLVSPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH  225 (307)
T ss_pred             CCCCCEEEeecCcceecCCC---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHH
Confidence            45678999999987554322   3457788999999874   34567889999999999999999999987766555444


Q ss_pred             HH
Q psy8825          79 IT   80 (92)
Q Consensus        79 i~   80 (92)
                      +.
T Consensus       226 ~~  227 (307)
T cd06607         226 IA  227 (307)
T ss_pred             Hh
Confidence            43

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.13  E-value=3.8e-10  Score=62.95  Aligned_cols=84  Identities=21%  Similarity=0.258  Sum_probs=63.6

Q ss_pred             CCCccccCCCccccccCCCC--CCCCCCcCCcCccchhh-ccCCCCchhhHHhHHHHHHHHHhCCCCCCC-CC-HHHHHH
Q psy8825           3 ESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQII-LYQPYGKSVDWWAYGVLLYEMLVGQPPFDG-ED-EEELFA   77 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~-~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~-~~-~~~~~~   77 (92)
                      ....+++.|||.+.......  ......++..|++||.. ....++.+.|+|++|++++++++|..||.+ .+ ......
T Consensus       133 ~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~  212 (225)
T smart00221      133 MDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSD  212 (225)
T ss_pred             CCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHH
Confidence            34678899999887665443  33456778889999998 555677789999999999999999999987 34 446677


Q ss_pred             HHHhCCCcC
Q psy8825          78 AITDHSVSY   86 (92)
Q Consensus        78 ~i~~~~~~~   86 (92)
                      .|..+.+..
T Consensus       213 ~~~~~~~~~  221 (225)
T smart00221      213 VWSFGVPLL  221 (225)
T ss_pred             HHhcCCccc
Confidence            777766443

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.12  E-value=2e-10  Score=66.76  Aligned_cols=81  Identities=21%  Similarity=0.384  Sum_probs=60.9

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+|+.|||.+........   .....++..|++||.+....++.+.|+|++|++++++++ |..||.+....+...
T Consensus       166 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~  245 (293)
T cd05053         166 TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK  245 (293)
T ss_pred             cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHH
Confidence            4567899999998876543321   122234567999999877778889999999999999997 889998877766666


Q ss_pred             HHHhC
Q psy8825          78 AITDH   82 (92)
Q Consensus        78 ~i~~~   82 (92)
                      .+...
T Consensus       246 ~~~~~  250 (293)
T cd05053         246 LLKEG  250 (293)
T ss_pred             HHHcC
Confidence            55544

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.12  E-value=7.9e-10  Score=62.97  Aligned_cols=80  Identities=18%  Similarity=0.331  Sum_probs=57.5

Q ss_pred             CCCCccccCCCccccccCCCCCCC---CCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSN---PRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~---~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+|+.|||.+..........   .......|++||.+....++.+.|+|++|++++++++ +..||..........
T Consensus       128 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~  207 (252)
T cd05084         128 TEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTRE  207 (252)
T ss_pred             cCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHH
Confidence            456678999999886554322111   1122346999999887778889999999999999997 888998766655555


Q ss_pred             HHHh
Q psy8825          78 AITD   81 (92)
Q Consensus        78 ~i~~   81 (92)
                      .+..
T Consensus       208 ~~~~  211 (252)
T cd05084         208 AIEQ  211 (252)
T ss_pred             HHHc
Confidence            4444

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.12  E-value=5.1e-10  Score=65.87  Aligned_cols=78  Identities=18%  Similarity=0.250  Sum_probs=59.0

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhc---cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIIL---YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~---~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+|+.|||.+....   ......|+..|++||.+.   ...++...|+|++|++++++++|..||...+.......
T Consensus       155 ~~~~~~kL~dfg~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~  231 (313)
T cd06633         155 TEPGQVKLADFGSASKSS---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH  231 (313)
T ss_pred             CCCCCEEEeecCCCcccC---CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence            356789999999875432   233567888999999974   34567789999999999999999999988776655555


Q ss_pred             HHhC
Q psy8825          79 ITDH   82 (92)
Q Consensus        79 i~~~   82 (92)
                      +...
T Consensus       232 ~~~~  235 (313)
T cd06633         232 IAQN  235 (313)
T ss_pred             HHhc
Confidence            5443

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.12  E-value=4.3e-10  Score=64.68  Aligned_cols=77  Identities=10%  Similarity=0.181  Sum_probs=55.4

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccC-------CCCchhhHHhHHHHHHHHHh-CCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQ-------PYGKSVDWWAYGVLLYEMLV-GQPPFDGE   70 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~-------~~~~~~~~ws~g~~~~~~~~-g~~p~~~~   70 (92)
                      +.+..+|+.|||.+.......   ......++..|++||.+...       .++.+.|+|++|++++++++ |..||...
T Consensus       134 ~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~  213 (269)
T cd05087         134 TADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHL  213 (269)
T ss_pred             cCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCC
Confidence            356678999999875543221   12234677889999987532       34678999999999999996 99999876


Q ss_pred             CHHHHHHH
Q psy8825          71 DEEELFAA   78 (92)
Q Consensus        71 ~~~~~~~~   78 (92)
                      ...+....
T Consensus       214 ~~~~~~~~  221 (269)
T cd05087         214 SDEQVLTY  221 (269)
T ss_pred             ChHHHHHH
Confidence            66555433

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.12  E-value=3.9e-10  Score=64.57  Aligned_cols=81  Identities=17%  Similarity=0.293  Sum_probs=60.5

Q ss_pred             CCCCccccCCCccccccCCCCC--CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG--SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~--~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+|+.|||.+..+.....  .....++..|++||.+....++.+.|+|++|++++++++ |..||.+.+..+....
T Consensus       136 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~  215 (260)
T cd05073         136 SASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA  215 (260)
T ss_pred             cCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            4567889999998765533221  122344567999999887778888999999999999998 8999998777666665


Q ss_pred             HHhC
Q psy8825          79 ITDH   82 (92)
Q Consensus        79 i~~~   82 (92)
                      +...
T Consensus       216 ~~~~  219 (260)
T cd05073         216 LERG  219 (260)
T ss_pred             HhCC
Confidence            5544

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.11  E-value=5.1e-10  Score=64.36  Aligned_cols=81  Identities=21%  Similarity=0.409  Sum_probs=60.7

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.+..+|+.|||.+........   .....++..|++||......++.+.|+|++|++++++++ |..||.+.+..+...
T Consensus       147 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~  226 (273)
T cd05074         147 NENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYN  226 (273)
T ss_pred             cCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHH
Confidence            4567889999998876543321   222345567899999887778888999999999999998 889998877766655


Q ss_pred             HHHhC
Q psy8825          78 AITDH   82 (92)
Q Consensus        78 ~i~~~   82 (92)
                      .+...
T Consensus       227 ~~~~~  231 (273)
T cd05074         227 YLIKG  231 (273)
T ss_pred             HHHcC
Confidence            55543

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.11  E-value=2.5e-10  Score=66.85  Aligned_cols=68  Identities=21%  Similarity=0.313  Sum_probs=54.1

Q ss_pred             CCccccCCCccccccCCCC----CCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           4 SQPFRERTLSHQDKIRPGR----GSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~----~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      ++.+|+.|||.+.......    .....+++..|++||.+.+. .++.+.|+|++|++++++++|..||.+..
T Consensus       148 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~  220 (316)
T cd07842         148 RGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGRE  220 (316)
T ss_pred             cceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCc
Confidence            7789999999887654332    23345778899999987653 46888999999999999999999998654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.11  E-value=6.8e-10  Score=63.82  Aligned_cols=81  Identities=14%  Similarity=0.332  Sum_probs=60.9

Q ss_pred             CCCCccccCCCccccccCCCCCC----CCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGS----NPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~----~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~   76 (92)
                      +.++.+++.|||.+.........    ....++..|++||.+.+..++.+.|+|++|++++++++ |..||...+..+..
T Consensus       140 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~  219 (267)
T cd05066         140 NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVI  219 (267)
T ss_pred             CCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHH
Confidence            45677899999988766433211    11223457999999987788899999999999999886 99999887776666


Q ss_pred             HHHHhC
Q psy8825          77 AAITDH   82 (92)
Q Consensus        77 ~~i~~~   82 (92)
                      ..+.+.
T Consensus       220 ~~~~~~  225 (267)
T cd05066         220 KAIEEG  225 (267)
T ss_pred             HHHhCC
Confidence            666654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.11  E-value=2.2e-10  Score=65.60  Aligned_cols=69  Identities=22%  Similarity=0.266  Sum_probs=56.0

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      +.++.+++.|||.+..+.... ......++..|++||.+.+..++.+.|+|++|++++++++|..||...
T Consensus       140 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  209 (267)
T cd08224         140 TATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD  209 (267)
T ss_pred             CCCCcEEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccC
Confidence            456788999999887654432 233457888999999988888888999999999999999999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.10  E-value=9.4e-10  Score=62.47  Aligned_cols=79  Identities=14%  Similarity=0.207  Sum_probs=61.5

Q ss_pred             CCCCccccCCCccccccCCCCC-CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG-SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~-~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+++.|||.+........ .....++..|++||.......+.+.|+|++|++++++++|..||...+.......+.
T Consensus       133 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~  212 (254)
T cd06627         133 TKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV  212 (254)
T ss_pred             CCCCCEEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh
Confidence            3467889999998877654432 334578889999999877667888999999999999999999998766555544444

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.10  E-value=1.3e-10  Score=75.60  Aligned_cols=66  Identities=11%  Similarity=-0.019  Sum_probs=50.9

Q ss_pred             CCccccCCCccccccCCC-----------------CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCC
Q psy8825           4 SQPFRERTLSHQDKIRPG-----------------RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPP   66 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~-----------------~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p   66 (92)
                      ++.+|+.|||.++.....                 ......+||+.|++||++.+..++.+.|+|++|++++|++++..|
T Consensus       135 ~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~  214 (793)
T PLN00181        135 DATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSS  214 (793)
T ss_pred             cCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCc
Confidence            457889999987643210                 011124689999999999888899999999999999999998887


Q ss_pred             CCC
Q psy8825          67 FDG   69 (92)
Q Consensus        67 ~~~   69 (92)
                      +..
T Consensus       215 ~~~  217 (793)
T PLN00181        215 REE  217 (793)
T ss_pred             hhh
Confidence            654

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.10  E-value=4.8e-10  Score=68.28  Aligned_cols=79  Identities=18%  Similarity=0.292  Sum_probs=58.7

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      ++++.+|+.|||.+.......   ...+..++..|++||.+....++.+.|+|++|++++++++ |..||......+...
T Consensus       273 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~  352 (401)
T cd05107         273 CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFY  352 (401)
T ss_pred             eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHH
Confidence            345678999999986543222   1223466788999999887778889999999999999998 888998765555444


Q ss_pred             HHH
Q psy8825          78 AIT   80 (92)
Q Consensus        78 ~i~   80 (92)
                      ...
T Consensus       353 ~~~  355 (401)
T cd05107         353 NAI  355 (401)
T ss_pred             HHH
Confidence            433

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.09  E-value=6.5e-10  Score=64.60  Aligned_cols=70  Identities=19%  Similarity=0.271  Sum_probs=54.3

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      +.++.++|.|||.+...... .......++..|++||.+.+. .++.+.|+|++|++++++++|..||.+.+
T Consensus       137 ~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~  208 (291)
T cd07870         137 SYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVS  208 (291)
T ss_pred             cCCCcEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCch
Confidence            46778999999987654322 223445678899999987653 46788999999999999999999997654

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.09  E-value=1.1e-09  Score=62.66  Aligned_cols=79  Identities=15%  Similarity=0.219  Sum_probs=61.0

Q ss_pred             CCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q psy8825           4 SQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH   82 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~   82 (92)
                      ++.+++.|||.+...... .......|+..|++||......++.+.|+|++|+++++++++..||.+.........+..+
T Consensus       141 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~  220 (260)
T cd08222         141 NNLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEG  220 (260)
T ss_pred             cCCEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcC
Confidence            356899999987665433 2334457888999999987777788899999999999999999999877666665555443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.09  E-value=8.2e-10  Score=65.49  Aligned_cols=71  Identities=25%  Similarity=0.328  Sum_probs=55.5

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE   74 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~   74 (92)
                      +.++.+++.|||.+....  .......++..|++||.+.. ..++.+.|+|++|++++++++|..||.+.....
T Consensus       142 ~~~~~~~l~dfg~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~  213 (328)
T cd07856         142 NENCDLKICDFGLARIQD--PQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN  213 (328)
T ss_pred             CCCCCEEeCccccccccC--CCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            456789999999886542  23344567888999998755 457889999999999999999999998776543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.09  E-value=9.8e-10  Score=65.43  Aligned_cols=77  Identities=23%  Similarity=0.344  Sum_probs=56.7

Q ss_pred             CCccccCCCccccccCCCCC----CCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Q psy8825           4 SQPFRERTLSHQDKIRPGRG----SNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAA   78 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~----~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~   78 (92)
                      +..+++.|||.+..+.....    .....++..|++||.+.. ..++.+.|+|++|++++++++|..||.+.+..+....
T Consensus       151 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~  230 (342)
T cd07854         151 DLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQL  230 (342)
T ss_pred             CceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            34679999998865532211    122357889999998654 4567889999999999999999999988766555544


Q ss_pred             HH
Q psy8825          79 IT   80 (92)
Q Consensus        79 i~   80 (92)
                      +.
T Consensus       231 ~~  232 (342)
T cd07854         231 IL  232 (342)
T ss_pred             HH
Confidence            43

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.09  E-value=7.7e-10  Score=64.21  Aligned_cols=88  Identities=20%  Similarity=0.369  Sum_probs=61.4

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCC--CCchhhHHhHHHHHHHHHhCCCCCCCCC----HH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQP--YGKSVDWWAYGVLLYEMLVGQPPFDGED----EE   73 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~--~~~~~~~ws~g~~~~~~~~g~~p~~~~~----~~   73 (92)
                      +.++.+++.|||.+..+....  ......|+..|++||...+..  .+.+.|+|++|++++++++|..||....    ..
T Consensus       139 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~  218 (288)
T cd05583         139 DSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQS  218 (288)
T ss_pred             CCCCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHH
Confidence            456788999999876654432  223356888999999976544  5778999999999999999999996432    23


Q ss_pred             HHHHHHHhCCCcCCCC
Q psy8825          74 ELFAAITDHSVSYPKM   89 (92)
Q Consensus        74 ~~~~~i~~~~~~~p~~   89 (92)
                      +....+.......|..
T Consensus       219 ~~~~~~~~~~~~~~~~  234 (288)
T cd05583         219 EISRRILKSKPPFPKT  234 (288)
T ss_pred             HHHHHHHccCCCCCcc
Confidence            3344444444444443

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.09  E-value=1.1e-09  Score=62.44  Aligned_cols=77  Identities=19%  Similarity=0.332  Sum_probs=59.0

Q ss_pred             ccccCCCccccccCCCCC-CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q psy8825           6 PFRERTLSHQDKIRPGRG-SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH   82 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~-~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~   82 (92)
                      .+|+.|||.+........ .....|+..|++||......++.+.|+|++|++++++++|..||...+..+....+...
T Consensus       140 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  217 (257)
T cd08225         140 VAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQG  217 (257)
T ss_pred             eEEecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc
Confidence            468999998876644322 22346888999999987777888999999999999999999999877665555444443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.08  E-value=1.1e-09  Score=62.22  Aligned_cols=78  Identities=15%  Similarity=0.278  Sum_probs=61.0

Q ss_pred             CCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCC-HHHHHHH
Q psy8825           3 ESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED-EEELFAA   78 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~-~~~~~~~   78 (92)
                      .++.+++.|||.+........   .....++..|++||.........+.|+|++|++++++++|..||...+ .......
T Consensus       136 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~  215 (260)
T cd06606         136 SDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYK  215 (260)
T ss_pred             CCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHh
Confidence            457889999998877655543   455678899999999887778889999999999999999999997764 3333434


Q ss_pred             HH
Q psy8825          79 IT   80 (92)
Q Consensus        79 i~   80 (92)
                      +.
T Consensus       216 ~~  217 (260)
T cd06606         216 IG  217 (260)
T ss_pred             cc
Confidence            33

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.08  E-value=8.1e-10  Score=64.39  Aligned_cols=77  Identities=18%  Similarity=0.382  Sum_probs=56.6

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh--CCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV--GQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~--g~~p~~~~~~~~~~   76 (92)
                      +.++.+|+.|||.+........   .....++..|++||......++.+.|+|++|++++++++  +..||......+.+
T Consensus       163 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~  242 (295)
T cd05097         163 GNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVI  242 (295)
T ss_pred             cCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHH
Confidence            4567899999998866543321   222345678999999887778899999999999999987  56788776554444


Q ss_pred             HH
Q psy8825          77 AA   78 (92)
Q Consensus        77 ~~   78 (92)
                      ..
T Consensus       243 ~~  244 (295)
T cd05097         243 EN  244 (295)
T ss_pred             HH
Confidence            33

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.08  E-value=7.7e-10  Score=64.52  Aligned_cols=75  Identities=19%  Similarity=0.412  Sum_probs=55.7

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh--CCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV--GQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~--g~~p~~~~~~~~~~   76 (92)
                      +.++.+++.|||.+..+.....   .....++..|++||......++.+.|+|++|++++++++  +..||...+..+.+
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~  243 (296)
T cd05095         164 GKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVI  243 (296)
T ss_pred             cCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHH
Confidence            4567889999999876543321   122344567999998877778889999999999999998  67888766554443

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.07  E-value=1.5e-09  Score=60.95  Aligned_cols=84  Identities=30%  Similarity=0.532  Sum_probs=64.6

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCC-CCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG-EDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~-~~~~~~~~~i~   80 (92)
                      +.++.+++.|||.+.............++..|++||......++.+.|+|++|+++++++++..||.. .+.......+.
T Consensus       121 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~  200 (244)
T smart00220      121 DEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIG  200 (244)
T ss_pred             CCCCcEEEccccceeeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh
Confidence            34567899999998776555445566788899999998877778899999999999999999999987 55555555555


Q ss_pred             hCCCc
Q psy8825          81 DHSVS   85 (92)
Q Consensus        81 ~~~~~   85 (92)
                      .....
T Consensus       201 ~~~~~  205 (244)
T smart00220      201 KPKPP  205 (244)
T ss_pred             ccCCC
Confidence            44443

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0664|consensus

Probab=99.07  E-value=3.5e-11  Score=69.81  Aligned_cols=83  Identities=13%  Similarity=0.131  Sum_probs=67.3

Q ss_pred             CCCccccCCCccccccCCCCCC--CCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGS--NPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~--~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      ..-.+|+.|||+++.-......  +..+-|-.|.+||++.+. .|+...|+||.||++-|++..+..|+...+.+++..|
T Consensus       191 SNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lI  270 (449)
T KOG0664|consen  191 SNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMI  270 (449)
T ss_pred             cCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHH
Confidence            3447899999999887665432  234667899999999875 5799999999999999999999999999998888888


Q ss_pred             HhCCCc
Q psy8825          80 TDHSVS   85 (92)
Q Consensus        80 ~~~~~~   85 (92)
                      ......
T Consensus       271 tdLLGT  276 (449)
T KOG0664|consen  271 IDLLGT  276 (449)
T ss_pred             HHHhCC
Confidence            775443

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.07  E-value=8.9e-10  Score=64.69  Aligned_cols=77  Identities=18%  Similarity=0.278  Sum_probs=57.5

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhc---cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIIL---YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~---~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+++.|||.+......   ....++..|++||.+.   ...++.+.|+|++|++++++++|..||...+..+....
T Consensus       149 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~  225 (308)
T cd06634         149 SEPGLVKLGDFGSASIMAPA---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH  225 (308)
T ss_pred             CCCCcEEECCcccceeecCc---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHH
Confidence            45678999999987654332   3456788999999874   23467789999999999999999999877665544444


Q ss_pred             HHh
Q psy8825          79 ITD   81 (92)
Q Consensus        79 i~~   81 (92)
                      +..
T Consensus       226 ~~~  228 (308)
T cd06634         226 IAQ  228 (308)
T ss_pred             Hhh
Confidence            443

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.07  E-value=1.4e-09  Score=62.15  Aligned_cols=79  Identities=14%  Similarity=0.277  Sum_probs=58.3

Q ss_pred             CCCCccccCCCccccccCCCCC-----CCCCCcCCcCccchhhccCC---CCchhhHHhHHHHHHHHHhCCCCCCCC-CH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG-----SNPRPSAYSILLFQIILYQP---YGKSVDWWAYGVLLYEMLVGQPPFDGE-DE   72 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~-----~~~~~g~~~~~~pe~~~~~~---~~~~~~~ws~g~~~~~~~~g~~p~~~~-~~   72 (92)
                      +.++.+|+.|||.+........     .....++..|++||.+....   +..+.|+|++|++++++++|..||.+. ..
T Consensus       133 ~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~  212 (264)
T cd06626         133 DHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE  212 (264)
T ss_pred             CCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch
Confidence            4567899999998876644322     12356788999999987655   678899999999999999999999765 33


Q ss_pred             HHHHHHHH
Q psy8825          73 EELFAAIT   80 (92)
Q Consensus        73 ~~~~~~i~   80 (92)
                      ......+.
T Consensus       213 ~~~~~~~~  220 (264)
T cd06626         213 FQIMFHVG  220 (264)
T ss_pred             HHHHHHHh
Confidence            33333333

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.07  E-value=8.9e-10  Score=64.08  Aligned_cols=79  Identities=15%  Similarity=0.392  Sum_probs=58.6

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh--CCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV--GQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~--g~~p~~~~~~~~~~   76 (92)
                      +.++.+++.|||.+.......   ......++..|++||......++.+.|+|++|++++++++  +..||...+..+.+
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~  243 (296)
T cd05051         164 GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVI  243 (296)
T ss_pred             cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHH
Confidence            456788999999886653332   1223456778999999877778889999999999999987  66788776655555


Q ss_pred             HHHH
Q psy8825          77 AAIT   80 (92)
Q Consensus        77 ~~i~   80 (92)
                      ..+.
T Consensus       244 ~~~~  247 (296)
T cd05051         244 ENAG  247 (296)
T ss_pred             HHHH
Confidence            5444

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.06  E-value=1.1e-10  Score=66.95  Aligned_cols=82  Identities=21%  Similarity=0.382  Sum_probs=63.5

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      ++++.+|+.|||.........   ......+...|++||.+....++.+.|+|++|++++++++ +..||...+..+...
T Consensus       137 ~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~  216 (259)
T PF07714_consen  137 DSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIE  216 (259)
T ss_dssp             ETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            456788999999887663221   1233456678999999988888999999999999999999 789999888888877


Q ss_pred             HHHhCC
Q psy8825          78 AITDHS   83 (92)
Q Consensus        78 ~i~~~~   83 (92)
                      ++.+..
T Consensus       217 ~~~~~~  222 (259)
T PF07714_consen  217 KLKQGQ  222 (259)
T ss_dssp             HHHTTE
T ss_pred             cccccc
Confidence            775553

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.06  E-value=1.8e-09  Score=62.78  Aligned_cols=68  Identities=16%  Similarity=0.229  Sum_probs=54.7

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      +.++.+++.|||.+....... .....++..|++||.+....++.+.|+|++|++++++++|..||...
T Consensus       139 ~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  206 (287)
T cd06621         139 TRKGQVKLCDFGVSGELVNSL-AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPE  206 (287)
T ss_pred             ecCCeEEEeeccccccccccc-cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence            356678999999876553322 23456788899999988778888999999999999999999999765

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.05  E-value=1.6e-09  Score=63.17  Aligned_cols=80  Identities=15%  Similarity=0.265  Sum_probs=59.0

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+|+.|||.+.......  ......++..|++||.+... .++...|+|++|++++++++|..||...+..+.+..
T Consensus       150 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~  229 (302)
T cd07864         150 NNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLEL  229 (302)
T ss_pred             CCCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence            456788999999886654332  22334567789999987543 457889999999999999999999987766555444


Q ss_pred             HHh
Q psy8825          79 ITD   81 (92)
Q Consensus        79 i~~   81 (92)
                      +.+
T Consensus       230 ~~~  232 (302)
T cd07864         230 ISR  232 (302)
T ss_pred             HHH
Confidence            443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.05  E-value=1.5e-09  Score=62.51  Aligned_cols=81  Identities=12%  Similarity=0.197  Sum_probs=57.5

Q ss_pred             CCCCccccCCCccccccCCC---CCCCCCCcCCcCccchhhcc-------CCCCchhhHHhHHHHHHHHHh-CCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPG---RGSNPRPSAYSILLFQIILY-------QPYGKSVDWWAYGVLLYEMLV-GQPPFDGE   70 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~---~~~~~~~g~~~~~~pe~~~~-------~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~   70 (92)
                      +.++.+++.|||.+......   ......+++..|++||.+..       ..++.+.|+|++|++++++++ +..||...
T Consensus       133 ~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~  212 (268)
T cd05086         133 TSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHL  212 (268)
T ss_pred             cCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Confidence            45678999999987543222   12234577889999998742       234567899999999999986 57788877


Q ss_pred             CHHHHHHHHHhC
Q psy8825          71 DEEELFAAITDH   82 (92)
Q Consensus        71 ~~~~~~~~i~~~   82 (92)
                      +..+.+.++...
T Consensus       213 ~~~~~~~~~~~~  224 (268)
T cd05086         213 SDREVLNHVIKD  224 (268)
T ss_pred             CHHHHHHHHHhh
Confidence            776666555443

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.05  E-value=9e-10  Score=64.15  Aligned_cols=79  Identities=15%  Similarity=0.278  Sum_probs=59.5

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+++.|||.+...... .......++..|++||.+.. ..++...|+|++|++++++++|.++|.+....+.+.++
T Consensus       136 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~  215 (298)
T cd07841         136 ASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKI  215 (298)
T ss_pred             cCCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHH
Confidence            45678899999988766443 23333456788999998754 34678899999999999999998888877765555555


Q ss_pred             H
Q psy8825          80 T   80 (92)
Q Consensus        80 ~   80 (92)
                      .
T Consensus       216 ~  216 (298)
T cd07841         216 F  216 (298)
T ss_pred             H
Confidence            4

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.05  E-value=4.2e-10  Score=65.17  Aligned_cols=68  Identities=15%  Similarity=0.256  Sum_probs=52.9

Q ss_pred             CCCCccccCCCccccccCCCCC----CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG----SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~----~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      +.++.+++.|||.+........    .....++..|++||......++.+.|+|++|++++++++|..|+..
T Consensus       141 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~  212 (283)
T cd05080         141 DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQS  212 (283)
T ss_pred             cCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCC
Confidence            4667899999999876643321    1223456678999998877788899999999999999999888754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.02  E-value=1.7e-09  Score=62.34  Aligned_cols=84  Identities=18%  Similarity=0.358  Sum_probs=61.9

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      ++++.+++.|++.+.......  ......++..|++||.+....+..+.|+|++|++++++++ |..||...........
T Consensus       151 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~  230 (275)
T cd05046         151 SSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNR  230 (275)
T ss_pred             eCCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHH
Confidence            456778899999876543321  2333456777999999877777888999999999999998 7889987666666666


Q ss_pred             HHhCCCc
Q psy8825          79 ITDHSVS   85 (92)
Q Consensus        79 i~~~~~~   85 (92)
                      +......
T Consensus       231 ~~~~~~~  237 (275)
T cd05046         231 LQAGKLE  237 (275)
T ss_pred             HHcCCcC
Confidence            6655443

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.01  E-value=2.3e-09  Score=62.90  Aligned_cols=73  Identities=14%  Similarity=0.140  Sum_probs=54.0

Q ss_pred             CCCCccccCCCccccccCCCC--------CCCCCCcCCcCccchhhcc--CCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--------GSNPRPSAYSILLFQIILY--QPYGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--------~~~~~~g~~~~~~pe~~~~--~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      +.++.+|+.||+.+.......        ......++..|++||.+..  ..++.+.|+|++|++++++++|..||....
T Consensus       135 ~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~  214 (314)
T cd08216         135 SGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMP  214 (314)
T ss_pred             ecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Confidence            346788999998775543221        1223456778999999865  347788999999999999999999998765


Q ss_pred             HHH
Q psy8825          72 EEE   74 (92)
Q Consensus        72 ~~~   74 (92)
                      ...
T Consensus       215 ~~~  217 (314)
T cd08216         215 ATQ  217 (314)
T ss_pred             HHH
Confidence            443

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.01  E-value=2.1e-09  Score=64.10  Aligned_cols=70  Identities=20%  Similarity=0.373  Sum_probs=53.4

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGED   71 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~   71 (92)
                      ++++.+|+.|||.+.......   ......++..|++||.+....++.+.|+|++|++++++++ |..||.+..
T Consensus       213 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~  286 (343)
T cd05103         213 SENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK  286 (343)
T ss_pred             cCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcc
Confidence            456789999999886653321   1122334567999999887788889999999999999997 889997654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.00  E-value=3e-09  Score=61.22  Aligned_cols=77  Identities=16%  Similarity=0.244  Sum_probs=57.1

Q ss_pred             CCCCccccCCCccccccCCC---CCCCCCCcCCcCccchhhccCC--CCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG---RGSNPRPSAYSILLFQIILYQP--YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~---~~~~~~~g~~~~~~pe~~~~~~--~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~   76 (92)
                      +.++.+++.|||.+......   .......|+..|++||.+....  ++.+.|+|++|++++++++|..||...+....+
T Consensus       142 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~  221 (272)
T cd06629         142 DADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAM  221 (272)
T ss_pred             cCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHH
Confidence            45678899999988654322   1223456888999999976543  678899999999999999999999766554444


Q ss_pred             HH
Q psy8825          77 AA   78 (92)
Q Consensus        77 ~~   78 (92)
                      ..
T Consensus       222 ~~  223 (272)
T cd06629         222 FK  223 (272)
T ss_pred             HH
Confidence            33

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0668|consensus

Probab=98.99  E-value=7.4e-10  Score=62.96  Aligned_cols=79  Identities=23%  Similarity=0.368  Sum_probs=66.9

Q ss_pred             CccccCCCccccccCCCCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCC-CCCCCCCHHHHHHHHHhC
Q psy8825           5 QPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQ-PPFDGEDEEELFAAITDH   82 (92)
Q Consensus         5 ~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~-~p~~~~~~~~~~~~i~~~   82 (92)
                      ..++|.|+|++....++...+.++.+..+--||.+.. ..|+.+.|+||+||++.+|+-.. +-|+|.++.+++.+|...
T Consensus       170 rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakV  249 (338)
T KOG0668|consen  170 RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKV  249 (338)
T ss_pred             ceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999999764 56789999999999999998755 556788888888888764


Q ss_pred             C
Q psy8825          83 S   83 (92)
Q Consensus        83 ~   83 (92)
                      .
T Consensus       250 L  250 (338)
T KOG0668|consen  250 L  250 (338)
T ss_pred             h
Confidence            3

>KOG1151|consensus

Probab=98.99  E-value=1.9e-10  Score=70.57  Aligned_cols=67  Identities=18%  Similarity=0.339  Sum_probs=53.8

Q ss_pred             CCCccccCCCccccccCCCC--------CCCCCCcCCcCccchhhccC----CCCchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           3 ESQPFRERTLSHQDKIRPGR--------GSNPRPSAYSILLFQIILYQ----PYGKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~--------~~~~~~g~~~~~~pe~~~~~----~~~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      ..|.+|++|||+++.+....        ....+.||.||++||++...    ..+.++|+|++|+++|..+.|..||-.
T Consensus       608 acGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGh  686 (775)
T KOG1151|consen  608 ACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGH  686 (775)
T ss_pred             ccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCC
Confidence            45789999999998775432        12346899999999997533    467889999999999999999999953

>KOG1187|consensus

Probab=98.98  E-value=6.6e-10  Score=66.90  Aligned_cols=69  Identities=13%  Similarity=0.190  Sum_probs=55.9

Q ss_pred             CCCCCccccCCCccccccCC-CCCCCCC-CcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           1 MGESQPFRERTLSHQDKIRP-GRGSNPR-PSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~-~~~~~~~-~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      |+++-.-|++|||++..... .....+. .||..|++||.......+.+.|+||+|+++.|+++|+.+...
T Consensus       210 LD~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~  280 (361)
T KOG1187|consen  210 LDEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQ  280 (361)
T ss_pred             ECCCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCC
Confidence            56788889999999955544 3333333 899999999998877778899999999999999999877653

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=98.98  E-value=1.8e-09  Score=61.89  Aligned_cols=67  Identities=19%  Similarity=0.437  Sum_probs=52.8

Q ss_pred             CccccCCCccccccCCCCC-----CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           5 QPFRERTLSHQDKIRPGRG-----SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         5 ~~~~l~d~~~~~~~~~~~~-----~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      ..++++|||.+........     .....|+..|++||.+....++.+.|+|++|++++++++|..||....
T Consensus       141 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~  212 (268)
T cd06630         141 QRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEK  212 (268)
T ss_pred             CEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence            3589999998866643311     123467889999999877778888999999999999999999996543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>KOG0576|consensus

Probab=98.97  E-value=5.9e-10  Score=70.71  Aligned_cols=87  Identities=14%  Similarity=0.140  Sum_probs=72.6

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhc---cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIIL---YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~---~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~   77 (92)
                      ...+.+|++|||.+..+... .+.+.+.||+.||+||+..   ...|+...|+|+.|+...|+...++|.....+.+.+.
T Consensus       146 td~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~  225 (829)
T KOG0576|consen  146 TDEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALF  225 (829)
T ss_pred             cccCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHH
Confidence            45688999999998877654 5677899999999999863   4568899999999999999988899988888888888


Q ss_pred             HHHhCCCcCCC
Q psy8825          78 AITDHSVSYPK   88 (92)
Q Consensus        78 ~i~~~~~~~p~   88 (92)
                      .+..-.+..|.
T Consensus       226 LmTkS~~qpp~  236 (829)
T KOG0576|consen  226 LMTKSGFQPPT  236 (829)
T ss_pred             HhhccCCCCCc
Confidence            88777776554

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=98.97  E-value=3.3e-09  Score=60.98  Aligned_cols=67  Identities=19%  Similarity=0.325  Sum_probs=51.9

Q ss_pred             CCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccC--CCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           4 SQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQ--PYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~--~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      ++.++|.|||.+...... .......|+..|++||.+...  .++.+.|+|++|++++++++|..||...
T Consensus       145 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~  214 (268)
T cd06624         145 SGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIEL  214 (268)
T ss_pred             CCeEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccc
Confidence            457899999988665432 223344678899999997543  3678899999999999999999999754

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.94  E-value=7.1e-09  Score=59.38  Aligned_cols=67  Identities=15%  Similarity=0.232  Sum_probs=49.9

Q ss_pred             ccccCCCccccccCCCCCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhC-CCCCCCCCHHHH
Q psy8825           6 PFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVG-QPPFDGEDEEEL   75 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g-~~p~~~~~~~~~   75 (92)
                      .+++.|||.+.....   .....++..|++||.+... .++.+.|+|++|++++++++| ..|+...+....
T Consensus       146 ~~~l~d~g~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~  214 (258)
T cd05078         146 FIKLSDPGISITVLP---KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK  214 (258)
T ss_pred             eEEecccccccccCC---chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH
Confidence            468899998755432   2345678889999998763 467889999999999999998 567666555433

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=98.94  E-value=5.1e-09  Score=61.99  Aligned_cols=73  Identities=14%  Similarity=0.140  Sum_probs=50.5

Q ss_pred             CCCccccCCCccccccCCC-C-------CCCCCCcCCcCccchhhcc--CCCCchhhHHhHHHHHHHHHhCCCCCCCCCH
Q psy8825           3 ESQPFRERTLSHQDKIRPG-R-------GSNPRPSAYSILLFQIILY--QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE   72 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~-~-------~~~~~~g~~~~~~pe~~~~--~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~   72 (92)
                      .++.+++.||+........ .       ......++..|++||.+..  ..++.+.|+|++|++++++++|..||.....
T Consensus       136 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  215 (327)
T cd08227         136 VDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPA  215 (327)
T ss_pred             cCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcch
Confidence            4556777777654332211 1       0122356677999999865  3578899999999999999999999987554


Q ss_pred             HHH
Q psy8825          73 EEL   75 (92)
Q Consensus        73 ~~~   75 (92)
                      ...
T Consensus       216 ~~~  218 (327)
T cd08227         216 TQM  218 (327)
T ss_pred             hHH
Confidence            443

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG1035|consensus

Probab=98.93  E-value=2.7e-09  Score=71.25  Aligned_cols=84  Identities=12%  Similarity=0.302  Sum_probs=61.9

Q ss_pred             CCCCCccccCCCccccccC-------------------CCCCCCCCCcCCcCccchhhccC---CCCchhhHHhHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIR-------------------PGRGSNPRPSAYSILLFQIILYQ---PYGKSVDWWAYGVLLY   58 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~-------------------~~~~~~~~~g~~~~~~pe~~~~~---~~~~~~~~ws~g~~~~   58 (92)
                      |+++..+|+.|||.+....                   .....++.+||..|+|||++...   .|+.+.|+||+|++++
T Consensus       730 Ld~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlF  809 (1351)
T KOG1035|consen  730 LDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLF  809 (1351)
T ss_pred             EcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHH
Confidence            4678899999999876611                   00134556899999999998654   4899999999999999


Q ss_pred             HHHhCCCCCCC-CCHHHHHHHHHhCCCcCC
Q psy8825          59 EMLVGQPPFDG-EDEEELFAAITDHSVSYP   87 (92)
Q Consensus        59 ~~~~g~~p~~~-~~~~~~~~~i~~~~~~~p   87 (92)
                      ||+..   |.. .....++..+..+..+.|
T Consensus       810 EM~yP---F~TsMERa~iL~~LR~g~iP~~  836 (1351)
T KOG1035|consen  810 EMLYP---FGTSMERASILTNLRKGSIPEP  836 (1351)
T ss_pred             HHhcc---CCchHHHHHHHHhcccCCCCCC
Confidence            99643   543 344566777776666666

>KOG1024|consensus

Probab=98.92  E-value=6.5e-09  Score=63.02  Aligned_cols=77  Identities=19%  Similarity=0.391  Sum_probs=60.8

Q ss_pred             ccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHh
Q psy8825           6 PFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~i~~   81 (92)
                      .+||+|-.+++-+.+..   ...+.---..||++|.+....|+...|+|++|+++||+.+ |+.|+...++++....+..
T Consensus       434 qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkd  513 (563)
T KOG1024|consen  434 QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKD  513 (563)
T ss_pred             eEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhc
Confidence            46788888777765542   1111112248999999999999999999999999999998 9999999999998887776


Q ss_pred             C
Q psy8825          82 H   82 (92)
Q Consensus        82 ~   82 (92)
                      +
T Consensus       514 G  514 (563)
T KOG1024|consen  514 G  514 (563)
T ss_pred             c
Confidence            5

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.91  E-value=7.4e-09  Score=61.31  Aligned_cols=81  Identities=15%  Similarity=0.176  Sum_probs=53.7

Q ss_pred             CCCCccccCCCccccccCCC-CCC-------CCCCcCCcCccchhhccC--CCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGS-------NPRPSAYSILLFQIILYQ--PYGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~-------~~~~g~~~~~~pe~~~~~--~~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      +.++.+++.+|+........ ...       ....++..|++||.+...  .++...|+|++|++++++++|..||.+..
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~  214 (328)
T cd08226         135 SGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDML  214 (328)
T ss_pred             eCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcC
Confidence            34566778887644322211 110       112345679999998653  46788999999999999999999998876


Q ss_pred             HHHHHHHHHhC
Q psy8825          72 EEELFAAITDH   82 (92)
Q Consensus        72 ~~~~~~~i~~~   82 (92)
                      .......+...
T Consensus       215 ~~~~~~~~~~~  225 (328)
T cd08226         215 RTQMLLQKLKG  225 (328)
T ss_pred             hHHHHHHHhcC
Confidence            65554444433

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.90  E-value=3.1e-09  Score=60.33  Aligned_cols=66  Identities=14%  Similarity=0.299  Sum_probs=51.1

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      +.++.+++.|||.+......  .....++..|++||......++.+.|+|++|++++++++|..++..
T Consensus       119 ~~~~~~~l~df~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~  184 (237)
T cd05576         119 DDRGHIQLTYFSRWSEVEDS--CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVEC  184 (237)
T ss_pred             cCCCCEEEecccchhccccc--cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhc
Confidence            45678899999976554332  2344567789999998777778889999999999999999876543

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.88  E-value=1.6e-08  Score=58.14  Aligned_cols=65  Identities=12%  Similarity=0.205  Sum_probs=48.9

Q ss_pred             cccCCCccccccCCCCCCCCCCcCCcCccchhhc-cCCCCchhhHHhHHHHHHHHH-hCCCCCCCCCHHH
Q psy8825           7 FRERTLSHQDKIRPGRGSNPRPSAYSILLFQIIL-YQPYGKSVDWWAYGVLLYEML-VGQPPFDGEDEEE   74 (92)
Q Consensus         7 ~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~-~~~~~~~~~~ws~g~~~~~~~-~g~~p~~~~~~~~   74 (92)
                      +++.|||.+.....   .....++..|++||.+. ...++.+.|+|++|+++++++ .+..|+.+....+
T Consensus       151 ~~l~d~g~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~  217 (262)
T cd05077         151 IKLSDPGIPITVLS---RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE  217 (262)
T ss_pred             eEeCCCCCCccccC---cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH
Confidence            78899998754422   22345778899999886 455788899999999999997 5888887655433

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.87  E-value=9.5e-09  Score=58.61  Aligned_cols=64  Identities=14%  Similarity=0.191  Sum_probs=49.8

Q ss_pred             ccccCCCccccccCCCCCCCCCCcCCcCccchhhccC--CCCchhhHHhHHHHHHHHHh-CCCCCCCCCH
Q psy8825           6 PFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQ--PYGKSVDWWAYGVLLYEMLV-GQPPFDGEDE   72 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~--~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~   72 (92)
                      .+|+.|||.+.....   .....+...|++||.+...  .++.+.|+|++|++++++++ +..|+...+.
T Consensus       146 ~~kl~Dfg~a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~  212 (259)
T cd05037         146 FIKLSDPGIPITVLS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS  212 (259)
T ss_pred             eEEeCCCCccccccc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc
Confidence            689999998866533   2234566789999998765  67888999999999999998 5777866543

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=98.84  E-value=1.2e-08  Score=64.63  Aligned_cols=64  Identities=13%  Similarity=0.084  Sum_probs=46.7

Q ss_pred             CCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCC----------------------CCchhhHHhHHHHHHH
Q psy8825           4 SQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQP----------------------YGKSVDWWAYGVLLYE   59 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~----------------------~~~~~~~ws~g~~~~~   59 (92)
                      ++.+|+.|||.+..+....  .....++++.|++||.+....                      +..+.|+|++|+++++
T Consensus       292 ~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~e  371 (566)
T PLN03225        292 SGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQ  371 (566)
T ss_pred             CCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHH
Confidence            4689999999997664432  334578999999999754322                      2234599999999999


Q ss_pred             HHhCCCCC
Q psy8825          60 MLVGQPPF   67 (92)
Q Consensus        60 ~~~g~~p~   67 (92)
                      ++.+..+.
T Consensus       372 l~~~~~~~  379 (566)
T PLN03225        372 MAFPNLRS  379 (566)
T ss_pred             HHhCcCCC
Confidence            99765543

>KOG2345|consensus

Probab=98.83  E-value=3.1e-09  Score=60.80  Aligned_cols=67  Identities=16%  Similarity=0.237  Sum_probs=50.2

Q ss_pred             CCCCccccCCCccccccCCCCC----------CCCCCcCCcCccchhhccC---CCCchhhHHhHHHHHHHHHhCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG----------SNPRPSAYSILLFQIILYQ---PYGKSVDWWAYGVLLYEMLVGQPPFD   68 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~----------~~~~~g~~~~~~pe~~~~~---~~~~~~~~ws~g~~~~~~~~g~~p~~   68 (92)
                      +.++...+.|||++....-...          .....+|..|.|||.+...   ..+.+.|+||+||++|++..|..||.
T Consensus       163 s~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe  242 (302)
T KOG2345|consen  163 SDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFE  242 (302)
T ss_pred             cCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcch
Confidence            4566778899998755432211          1223578899999998643   45788999999999999999999995

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.83  E-value=3.4e-08  Score=57.20  Aligned_cols=66  Identities=14%  Similarity=0.184  Sum_probs=48.9

Q ss_pred             ccccCCCccccccCCCCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHH-hCCCCCCCCCHHH
Q psy8825           6 PFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEML-VGQPPFDGEDEEE   74 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~-~g~~p~~~~~~~~   74 (92)
                      .+|+.|||.+......   ....++..|++||.+.. ..++.+.|+|++|+++++++ .|..||.+....+
T Consensus       162 ~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~  229 (274)
T cd05076         162 FIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE  229 (274)
T ss_pred             eeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence            4789999976443221   23356778999998865 45788999999999999985 6888998765443

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.80  E-value=7.9e-09  Score=59.95  Aligned_cols=65  Identities=15%  Similarity=0.244  Sum_probs=50.0

Q ss_pred             CCCCccccCCCccccccCCCCC----CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG----SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPP   66 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~----~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p   66 (92)
                      +.++.+++.|||.+..+.....    .....++..|++||...+..++.+.|+|++|+++++++++..+
T Consensus       143 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~  211 (284)
T cd05079         143 ESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDS  211 (284)
T ss_pred             cCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCC
Confidence            4567899999998876644321    2234567789999998777788889999999999999986543

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.79  E-value=1.7e-08  Score=58.49  Aligned_cols=66  Identities=14%  Similarity=0.242  Sum_probs=49.0

Q ss_pred             CCCCccccCCCccccccCCCCCC----CCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGS----NPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPF   67 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~----~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~   67 (92)
                      +.++.+|+.|||.+.........    ....+...|++||...+..++.+.|+|++|+++++++++..++
T Consensus       142 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~  211 (284)
T cd05081         142 ESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKS  211 (284)
T ss_pred             CCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcC
Confidence            45677899999998766443221    1122344689999988777888999999999999999876554

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG1152|consensus

Probab=98.77  E-value=1e-09  Score=68.90  Aligned_cols=67  Identities=16%  Similarity=0.256  Sum_probs=56.1

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCC-CchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      +..|-+||.|||.+... -+....+++||..|.|||++.+..| +...|+|.+|+++|.......||..
T Consensus       704 d~~g~~klidfgsaa~~-ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  704 DSNGFVKLIDFGSAAYT-KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             ecCCeEEEeeccchhhh-cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence            34577899999998665 4456778999999999999999998 6778999999999988877777753

>KOG1025|consensus

Probab=98.76  E-value=1.5e-08  Score=66.13  Aligned_cols=80  Identities=18%  Similarity=0.398  Sum_probs=64.0

Q ss_pred             CCCccccCCCccccccCCCCC-CCCCCc--CCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           3 ESQPFRERTLSHQDKIRPGRG-SNPRPS--AYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~-~~~~~g--~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +...+|+.|||.++-+.+... +..-.|  -..||+-|.+....|.++.|+|++|+.+||+++ |..|+.+....++-..
T Consensus       833 sP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dl  912 (1177)
T KOG1025|consen  833 SPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDL  912 (1177)
T ss_pred             CCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHH
Confidence            456789999999988876643 333333  357899999999999999999999999999998 9999999887777655


Q ss_pred             HHhC
Q psy8825          79 ITDH   82 (92)
Q Consensus        79 i~~~   82 (92)
                      ++.+
T Consensus       913 le~g  916 (1177)
T KOG1025|consen  913 LEKG  916 (1177)
T ss_pred             Hhcc
Confidence            5554

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.68  E-value=2.5e-08  Score=57.59  Aligned_cols=68  Identities=15%  Similarity=0.272  Sum_probs=51.7

Q ss_pred             CCCCccccCCCccccccCCCCCC----CCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGS----NPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~----~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      +.++.+++.|||.+.........    ....+...|++||......++...|+|++|++++++++|..|+..
T Consensus       143 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~  214 (284)
T cd05038         143 ESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQS  214 (284)
T ss_pred             cCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCccc
Confidence            45678899999988776533211    112344568999998777788889999999999999999888764

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.61  E-value=1.3e-07  Score=59.44  Aligned_cols=68  Identities=19%  Similarity=0.191  Sum_probs=47.4

Q ss_pred             CCCCccccCCCccccccCCCCCCCCC--CcCCcCccchhhccCC--------------------CC--chhhHHhHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPR--PSAYSILLFQIILYQP--------------------YG--KSVDWWAYGVLL   57 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~--~g~~~~~~pe~~~~~~--------------------~~--~~~~~ws~g~~~   57 (92)
                      +.++.+|+.|||.+............  .+++.|++||.+....                    ++  ...|+|++|+++
T Consensus       343 ~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil  422 (507)
T PLN03224        343 TVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLL  422 (507)
T ss_pred             CCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHH
Confidence            45678999999998665444333333  3478999999875321                    11  236999999999


Q ss_pred             HHHHhCCC-CCCC
Q psy8825          58 YEMLVGQP-PFDG   69 (92)
Q Consensus        58 ~~~~~g~~-p~~~   69 (92)
                      ++|+.+.. |+.+
T Consensus       423 ~em~~~~l~p~~~  435 (507)
T PLN03224        423 MQMCVPELRPVAN  435 (507)
T ss_pred             HHHHhCCCCCccc
Confidence            99998764 6653

>KOG1033|consensus

Probab=98.61  E-value=2.8e-08  Score=61.53  Aligned_cols=59  Identities=17%  Similarity=0.246  Sum_probs=48.6

Q ss_pred             CCccccCCCccccccCCCC-------CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh
Q psy8825           4 SQPFRERTLSHQDKIRPGR-------GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV   62 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~-------~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~   62 (92)
                      +..+|+-|||+........       ....-+||.+||+||.+.+..|+.+.|++++|++++|++.
T Consensus       392 d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  392 DDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI  457 (516)
T ss_pred             chhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence            4468899999865554333       3344589999999999999999999999999999999987

>KOG3653|consensus

Probab=98.60  E-value=4.9e-08  Score=60.12  Aligned_cols=61  Identities=13%  Similarity=0.183  Sum_probs=46.6

Q ss_pred             CCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCC-C-----CchhhHHhHHHHHHHHHhCC
Q psy8825           4 SQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQP-Y-----GKSVDWWAYGVLLYEMLVGQ   64 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~-~-----~~~~~~ws~g~~~~~~~~g~   64 (92)
                      |...=++|||++..+.+...   ...-+||.+|||||++.+.- +     -.+.|+|++|+++||+++..
T Consensus       352 DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC  421 (534)
T KOG3653|consen  352 DLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRC  421 (534)
T ss_pred             CCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhc
Confidence            44555889999988876642   33368999999999987642 2     24689999999999999843

>KOG1027|consensus

Probab=98.58  E-value=1e-08  Score=66.44  Aligned_cols=64  Identities=16%  Similarity=0.248  Sum_probs=53.2

Q ss_pred             ccccCCCccccccCCCC----CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCC
Q psy8825           6 PFRERTLSHQDKIRPGR----GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDG   69 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~----~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~   69 (92)
                      ..+++|||+++++..++    +..+..||..|.|||.+....-...+|+.++||++++.++ |..||-.
T Consensus       649 ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd  717 (903)
T KOG1027|consen  649 RAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGD  717 (903)
T ss_pred             eEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCc
Confidence            56799999999997764    3455679999999999988777778999999999988887 5778843

>KOG1094|consensus

Probab=98.56  E-value=8.1e-08  Score=60.83  Aligned_cols=74  Identities=16%  Similarity=0.356  Sum_probs=57.8

Q ss_pred             CCCCccccCCCccccccCCCCCC--C-CCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh--CCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGS--N-PRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV--GQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~--~-~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~--g~~p~~~~~~~~~   75 (92)
                      |....+|++|||.++.+-.+.-+  + ..+--.+||++|.+...+++.+.|+|.+|+.+||++.  ...||......++
T Consensus       671 ~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v  749 (807)
T KOG1094|consen  671 DGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV  749 (807)
T ss_pred             cCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH
Confidence            56678999999999988555322  1 1234469999999999999999999999999999997  5678876554443

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=98.45  E-value=2.1e-07  Score=62.00  Aligned_cols=42  Identities=19%  Similarity=0.302  Sum_probs=38.2

Q ss_pred             CCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCC
Q psy8825          27 RPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFD   68 (92)
Q Consensus        27 ~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~   68 (92)
                      ..++..|+|||.+.+..++.+.|+|++|++++|+++|..||.
T Consensus       838 ~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~  879 (968)
T PLN00113        838 CFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPAD  879 (968)
T ss_pred             ccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCC
Confidence            367889999999988888999999999999999999999984

>KOG2052|consensus

Probab=98.28  E-value=1.1e-06  Score=54.10  Aligned_cols=60  Identities=17%  Similarity=0.248  Sum_probs=44.1

Q ss_pred             CCCccccCCCccccccCCC-----CCCCCCCcCCcCccchhhccC----CCC--chhhHHhHHHHHHHHHh
Q psy8825           3 ESQPFRERTLSHQDKIRPG-----RGSNPRPSAYSILLFQIILYQ----PYG--KSVDWWAYGVLLYEMLV   62 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~-----~~~~~~~g~~~~~~pe~~~~~----~~~--~~~~~ws~g~~~~~~~~   62 (92)
                      +++..-++|+|++-.....     ...+..+||.+|||||++-..    .|.  ..+|+|++|+++||+..
T Consensus       351 kn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiar  421 (513)
T KOG2052|consen  351 KNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIAR  421 (513)
T ss_pred             cCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHH
Confidence            3455568899988655443     235667999999999998542    221  35899999999999986

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.23  E-value=1.8e-05  Score=45.79  Aligned_cols=78  Identities=21%  Similarity=0.351  Sum_probs=59.1

Q ss_pred             ccccCCCccccccCCCC-------CCCCCCcCCcCccchhhcc---CCCCchhhHHhHHHHHHHHHhCCCCCCCCC----
Q psy8825           6 PFRERTLSHQDKIRPGR-------GSNPRPSAYSILLFQIILY---QPYGKSVDWWAYGVLLYEMLVGQPPFDGED----   71 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~-------~~~~~~g~~~~~~pe~~~~---~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~----   71 (92)
                      ..++.|||.+.......       ......|+..|++||.+..   ..+....|+|++|+.+++++.+..|+....    
T Consensus       140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~  219 (384)
T COG0515         140 VVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSA  219 (384)
T ss_pred             eEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcccc
Confidence            57899999887554432       3466789999999999877   466888999999999999999999987765    


Q ss_pred             HHHHHHHHHhCC
Q psy8825          72 EEELFAAITDHS   83 (92)
Q Consensus        72 ~~~~~~~i~~~~   83 (92)
                      .......+....
T Consensus       220 ~~~~~~~~~~~~  231 (384)
T COG0515         220 TSQTLKIILELP  231 (384)
T ss_pred             HHHHHHHHHhcC
Confidence            244444444443

>KOG0590|consensus

Probab=98.22  E-value=1.8e-07  Score=59.78  Aligned_cols=68  Identities=18%  Similarity=0.294  Sum_probs=55.8

Q ss_pred             CCCccccCCCccccccCCCC-----CCCCCCcCCcCccchhhccCCCC-chhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           3 ESQPFRERTLSHQDKIRPGR-----GSNPRPSAYSILLFQIILYQPYG-KSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~-----~~~~~~g~~~~~~pe~~~~~~~~-~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      ..+.+|+.|||.+..+....     ....++|+.-|+|||++....|. +..|+|+.|++++.|..++.||.-.
T Consensus       455 ~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a  528 (601)
T KOG0590|consen  455 ENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVA  528 (601)
T ss_pred             cCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccc
Confidence            45689999999887775432     34557899999999999988884 6689999999999999999888643

>KOG0195|consensus

Probab=98.12  E-value=6.2e-06  Score=48.55  Aligned_cols=62  Identities=19%  Similarity=0.285  Sum_probs=48.4

Q ss_pred             CCcCccchhhccCCC---CchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCcCCCCCC
Q psy8825          30 AYSILLFQIILYQPY---GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH--SVSYPKMAV   91 (92)
Q Consensus        30 ~~~~~~pe~~~~~~~---~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~--~~~~p~~~~   91 (92)
                      ++.||+||.+....-   -..+|+||+.+++||+-+...||....+.++--+|.-.  .+.+|+.++
T Consensus       349 ~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis  415 (448)
T KOG0195|consen  349 SPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGIS  415 (448)
T ss_pred             CcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCcc
Confidence            578999999864432   35689999999999999999999998888886666554  356676654

>KOG0606|consensus

Probab=97.98  E-value=2.4e-05  Score=52.86  Aligned_cols=64  Identities=31%  Similarity=0.686  Sum_probs=58.1

Q ss_pred             CCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcCCCC
Q psy8825          26 PRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPKM   89 (92)
Q Consensus        26 ~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~~~~p~~   89 (92)
                      ...||+.|.+||...+......+|+|+.|+.+++.+.|.+||....+.++...|.....++|..
T Consensus       994 ~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g 1057 (1205)
T KOG0606|consen  994 AVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEG 1057 (1205)
T ss_pred             cccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCC
Confidence            4578999999999999888888999999999999999999999999999999999988888753

>KOG1164|consensus

Probab=97.91  E-value=4.5e-05  Score=45.57  Aligned_cols=67  Identities=13%  Similarity=0.094  Sum_probs=52.6

Q ss_pred             CccccCCCcccc--ccCCCC--------C-CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           5 QPFRERTLSHQD--KIRPGR--------G-SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         5 ~~~~l~d~~~~~--~~~~~~--------~-~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      ..+.+.|||.++  ......        . ...+.||..|.++.+-.+...++.-|+|++..++.++..|..||.+..
T Consensus       164 ~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~  241 (322)
T KOG1164|consen  164 RTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALE  241 (322)
T ss_pred             ceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCcccc
Confidence            357789999998  432111        1 234569999999998888888899999999999999999999997755

>KOG1345|consensus

Probab=97.90  E-value=3e-06  Score=49.68  Aligned_cols=64  Identities=13%  Similarity=0.211  Sum_probs=44.1

Q ss_pred             CccccCCCccccccCCCCCCCCCCcCCcCccchhhc---cCC--CCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           5 QPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIIL---YQP--YGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         5 ~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~---~~~--~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      -.+||+|||...+.....  ..+--+.-|.+||...   ...  .....|+|.+|++++..++|.+||+..
T Consensus       160 ~rvKlcDFG~t~k~g~tV--~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka  228 (378)
T KOG1345|consen  160 YRVKLCDFGLTRKVGTTV--KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKA  228 (378)
T ss_pred             cEEEeeecccccccCcee--hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhh
Confidence            378999999986643322  1222233466777542   222  367889999999999999999999843

>KOG1167|consensus

Probab=97.72  E-value=1.8e-05  Score=48.35  Aligned_cols=56  Identities=21%  Similarity=0.421  Sum_probs=41.8

Q ss_pred             CCCCCcCCcCccchhhc-cCCCCchhhHHhHHHHHHHHHhCCCCCC-CCCHHHHHHHH
Q psy8825          24 SNPRPSAYSILLFQIIL-YQPYGKSVDWWAYGVLLYEMLVGQPPFD-GEDEEELFAAI   79 (92)
Q Consensus        24 ~~~~~g~~~~~~pe~~~-~~~~~~~~~~ws~g~~~~~~~~g~~p~~-~~~~~~~~~~i   79 (92)
                      ...+.||+.|.+||++. +...+.+.|+|+.|+++...+++..||- ..+..+.+..|
T Consensus       234 ~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei  291 (418)
T KOG1167|consen  234 RANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEI  291 (418)
T ss_pred             ecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHH
Confidence            44578999999999975 4455788999999999999999887774 34433443333

>KOG1165|consensus

Probab=97.63  E-value=7.9e-05  Score=45.06  Aligned_cols=76  Identities=14%  Similarity=0.190  Sum_probs=59.1

Q ss_pred             ccccCCCccccccCCCC--------CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCC---HHH
Q psy8825           6 PFRERTLSHQDKIRPGR--------GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED---EEE   74 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~--------~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~---~~~   74 (92)
                      .+-++|||+++......        ..++..||.+||+...-.+...+++-|+=++|-+++..+.|.+||+|..   ..+
T Consensus       167 ~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~  246 (449)
T KOG1165|consen  167 VIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKE  246 (449)
T ss_pred             eEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHH
Confidence            45688999987664432        2455689999999887777777888999999999999999999999863   445


Q ss_pred             HHHHHHh
Q psy8825          75 LFAAITD   81 (92)
Q Consensus        75 ~~~~i~~   81 (92)
                      -+++|-+
T Consensus       247 kYeKIGe  253 (449)
T KOG1165|consen  247 KYEKIGE  253 (449)
T ss_pred             HHHHhcc
Confidence            5666544

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=97.45  E-value=0.00025  Score=38.74  Aligned_cols=57  Identities=16%  Similarity=0.315  Sum_probs=43.2

Q ss_pred             CCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHH
Q psy8825           4 SQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEM   60 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~   60 (92)
                      ++.+++.||+.+....... ......+...|++||..... ..+...|+|++|++++++
T Consensus       129 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l  187 (215)
T cd00180         129 NGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL  187 (215)
T ss_pred             CCcEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence            4678899999876654332 23335677789999998766 667889999999999887

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=97.36  E-value=3.8e-05  Score=45.38  Aligned_cols=68  Identities=16%  Similarity=0.226  Sum_probs=40.9

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccC--------CCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQ--------PYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~--------~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      ++++|.+.|.||+........  ......+..+.+||.....        .++.+.|.|.+|+++|.++.+..||...
T Consensus       178 l~~~G~v~Lg~F~~~~r~g~~--~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~  253 (288)
T PF14531_consen  178 LDQDGGVFLGDFSSLVRAGTR--YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLS  253 (288)
T ss_dssp             E-TTS-EEE--GGGEEETTEE--EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCC
T ss_pred             EcCCCCEEEcChHHHeecCce--eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCC
Confidence            357888899999765433222  1112223567888876432        3577889999999999999999998643

>KOG0590|consensus

Probab=97.33  E-value=7.6e-05  Score=48.21  Aligned_cols=69  Identities=26%  Similarity=0.370  Sum_probs=54.2

Q ss_pred             CCCC-ccccCCCccccccCC-C---CCCCCCCc-CCcCccchhhccCCC-CchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           2 GESQ-PFRERTLSHQDKIRP-G---RGSNPRPS-AYSILLFQIILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         2 ~~~~-~~~l~d~~~~~~~~~-~---~~~~~~~g-~~~~~~pe~~~~~~~-~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      ..++ .++..|||.+..... .   ......+| ++.|++||...+..+ ....|+|+.|+++..+..|..|+...
T Consensus       158 ~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~  233 (601)
T KOG0590|consen  158 DESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFP  233 (601)
T ss_pred             ccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccc
Confidence            3445 789999999877765 2   23444688 999999999877544 67789999999999999998888643

>KOG1163|consensus

Probab=97.07  E-value=0.00016  Score=42.05  Aligned_cols=78  Identities=14%  Similarity=0.116  Sum_probs=55.6

Q ss_pred             ccccCCCccccccCCCC--------CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH---H
Q psy8825           6 PFRERTLSHQDKIRPGR--------GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEE---E   74 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~--------~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~---~   74 (92)
                      .+-+.|||++++.....        ......||.+|.+.....+...++.-|+-|+|.++...-.|..||++....   +
T Consensus       152 kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~Q  231 (341)
T KOG1163|consen  152 KLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQ  231 (341)
T ss_pred             eEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHH
Confidence            45578999998875432        233457999998776655555677788999999999888899999997543   2


Q ss_pred             HHHHHHhCC
Q psy8825          75 LFAAITDHS   83 (92)
Q Consensus        75 ~~~~i~~~~   83 (92)
                      -+.+|.+-.
T Consensus       232 KyEkI~EkK  240 (341)
T KOG1163|consen  232 KYEKISEKK  240 (341)
T ss_pred             HHHHHHHhh
Confidence            344554433

>KOG4158|consensus

Probab=96.74  E-value=0.0038  Score=39.10  Aligned_cols=87  Identities=16%  Similarity=0.093  Sum_probs=55.7

Q ss_pred             ccccCCCccccccCCC-------CCCCCCCcCCcCccchhhccCC-----C-CchhhHHhHHHHHHHHHhCCCCCCCCCH
Q psy8825           6 PFRERTLSHQDKIRPG-------RGSNPRPSAYSILLFQIILYQP-----Y-GKSVDWWAYGVLLYEMLVGQPPFDGEDE   72 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~-------~~~~~~~g~~~~~~pe~~~~~~-----~-~~~~~~ws~g~~~~~~~~g~~p~~~~~~   72 (92)
                      .+-++|||-+-.....       ...-...|....|+||+.....     . -.++|.|..|.+.||.+....||.+.-.
T Consensus       383 ~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGe  462 (598)
T KOG4158|consen  383 QLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGE  462 (598)
T ss_pred             EEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccch
Confidence            5567899865433321       1112235677889999975321     1 1468999999999999998899987433


Q ss_pred             HHH--HHHHHhCCCcCCCCCCC
Q psy8825          73 EEL--FAAITDHSVSYPKMAVF   92 (92)
Q Consensus        73 ~~~--~~~i~~~~~~~p~~~~~   92 (92)
                      ...  -..-+...+.+|+.++|
T Consensus       463 m~L~~r~Yqe~qLPalp~~vpp  484 (598)
T KOG4158|consen  463 MLLDTRTYQESQLPALPSRVPP  484 (598)
T ss_pred             heechhhhhhhhCCCCcccCCh
Confidence            322  22234456788887765

>KOG1023|consensus

Probab=96.52  E-value=0.0042  Score=39.44  Aligned_cols=76  Identities=16%  Similarity=0.313  Sum_probs=52.3

Q ss_pred             ccccCCCccccccCCC---CCCCCCCcCCcCccchhhccCC-------CCchhhHHhHHHHHHHHHhCCCCCCCC----C
Q psy8825           6 PFRERTLSHQDKIRPG---RGSNPRPSAYSILLFQIILYQP-------YGKSVDWWAYGVLLYEMLVGQPPFDGE----D   71 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~---~~~~~~~g~~~~~~pe~~~~~~-------~~~~~~~ws~g~~~~~~~~g~~p~~~~----~   71 (92)
                      .+|++|||........   .......-...|.+||.+....       .....|+|++|+++++++....||...    +
T Consensus        87 ~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~  166 (484)
T KOG1023|consen   87 VLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVED  166 (484)
T ss_pred             EEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCC
Confidence            5789999987665321   1111122345789999987632       245689999999999999988888652    3


Q ss_pred             HHHHHHHHHh
Q psy8825          72 EEELFAAITD   81 (92)
Q Consensus        72 ~~~~~~~i~~   81 (92)
                      +.+++.++..
T Consensus       167 ~~eii~~~~~  176 (484)
T KOG1023|consen  167 PDEIILRVKK  176 (484)
T ss_pred             hHHHHHHHHh
Confidence            4567777776

>KOG0576|consensus

Probab=95.12  E-value=0.017  Score=38.28  Aligned_cols=68  Identities=13%  Similarity=0.106  Sum_probs=53.6

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCC
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFD   68 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~   68 (92)
                      +|+.+..|..+++....+.......+..+++.+++||+.....+....+.|+.+....++..+.+|-.
T Consensus       364 l~s~~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~  431 (829)
T KOG0576|consen  364 LGSEEEVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS  431 (829)
T ss_pred             cccccccccccccCCcccCcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence            45667788888988877766666777899999999999988888888899998876666666655543

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=94.45  E-value=0.089  Score=33.67  Aligned_cols=68  Identities=12%  Similarity=0.089  Sum_probs=45.1

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc-----CCCCchhhHHhHHHHHHHHHh-CCCCCCCC
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY-----QPYGKSVDWWAYGVLLYEMLV-GQPPFDGE   70 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-----~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~   70 (92)
                      .++.+.|.|--.-.....+....+.+|...|++||.-.-     -......|...+++++++++- |..||.|.
T Consensus       152 d~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI  225 (637)
T COG4248         152 DDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI  225 (637)
T ss_pred             cCceEEEEcccceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence            445555555433222233445566789999999998642     233456788899999999887 48899874

>PRK12274 serine/threonine protein kinase; Provisional

Probab=94.05  E-value=0.029  Score=32.21  Aligned_cols=70  Identities=11%  Similarity=-0.028  Sum_probs=43.7

Q ss_pred             CCCCccccCCCccccccCCCCCC----C---------C-CCcCCcCccchhhccC-CCCchhhHH-hHHHHHHHHHhCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGS----N---------P-RPSAYSILLFQIILYQ-PYGKSVDWW-AYGVLLYEMLVGQP   65 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~----~---------~-~~g~~~~~~pe~~~~~-~~~~~~~~w-s~g~~~~~~~~g~~   65 (92)
                      +.++.+++.|||.+.........    .         . ...|+.++.|+...-. ..+....+| ..|..++.+.++..
T Consensus       126 ~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~  205 (218)
T PRK12274        126 QEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRV  205 (218)
T ss_pred             cCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccC
Confidence            46778999999998755443321    0         0 1245666776654333 234344566 56889999999887


Q ss_pred             CCCCCC
Q psy8825          66 PFDGED   71 (92)
Q Consensus        66 p~~~~~   71 (92)
                      +..++.
T Consensus       206 ~~~~~~  211 (218)
T PRK12274        206 LHWEDN  211 (218)
T ss_pred             CccccC
Confidence            776643

>KOG1166|consensus

Probab=93.79  E-value=0.045  Score=37.79  Aligned_cols=60  Identities=10%  Similarity=0.119  Sum_probs=49.1

Q ss_pred             CccccCCCccccccCC---CCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCC
Q psy8825           5 QPFRERTLSHQDKIRP---GRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQ   64 (92)
Q Consensus         5 ~~~~l~d~~~~~~~~~---~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~   64 (92)
                      ..++|.|||.+.-+..   +.+...+++|-.+.++|...+..++.+.|.+.+..+++.|+-|.
T Consensus       838 ~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~  900 (974)
T KOG1166|consen  838 KGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGK  900 (974)
T ss_pred             cceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence            3688999998765543   34666778999999999999999999999999988888888763

>KOG1240|consensus

Probab=93.54  E-value=0.089  Score=37.18  Aligned_cols=38  Identities=18%  Similarity=0.430  Sum_probs=29.6

Q ss_pred             CcCccchhhccC----------C-CCchhhHHhHHHHHHHHHh-CCCCCC
Q psy8825          31 YSILLFQIILYQ----------P-YGKSVDWWAYGVLLYEMLV-GQPPFD   68 (92)
Q Consensus        31 ~~~~~pe~~~~~----------~-~~~~~~~ws~g~~~~~~~~-g~~p~~   68 (92)
                      .+|.|||.+...          . ..+..|+.+.||++.|++. |.++|.
T Consensus       191 tCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~  240 (1431)
T KOG1240|consen  191 TCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT  240 (1431)
T ss_pred             eeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc
Confidence            369999987541          1 3567899999999999997 778773

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=91.50  E-value=0.065  Score=35.56  Aligned_cols=40  Identities=3%  Similarity=-0.216  Sum_probs=29.4

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhcc
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILY   41 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~   41 (92)
                      +.++.+||.|||.+...... ......++++.|++|+....
T Consensus       138 ~~~g~vkL~DFGls~~~~~~~~~~~~~~~t~~~~~pe~~~~  178 (669)
T cd05610         138 SNEGHIKLTDFGLSKVTLNRELNMMDILTTPSMAKPKNDYS  178 (669)
T ss_pred             cCCCCEEEEeCCCCccccCCcccccccccCccccCcccccc
Confidence            45778999999998766433 34445688999999987544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>PRK09188 serine/threonine protein kinase; Provisional

Probab=91.25  E-value=0.054  Score=33.47  Aligned_cols=40  Identities=5%  Similarity=-0.142  Sum_probs=27.8

Q ss_pred             CCCCccccCCCccccccCCCCC---------CCCCCcCCcCccchhhcc
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---------SNPRPSAYSILLFQIILY   41 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---------~~~~~g~~~~~~pe~~~~   41 (92)
                      +.++.+||.|||.++.+.....         ..+.+++..|.+||.+..
T Consensus       146 ~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        146 GPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             cCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence            4567899999999886654321         134567888888887743

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	92
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		7e-22
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		2e-20
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		8e-20
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		6e-14
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		7e-14
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		9e-12
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		7e-09
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		1e-08
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		1e-08
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		1e-08
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		1e-08
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		1e-08
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		1e-08
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		1e-08
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		1e-08
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-08
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-08
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		1e-08
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-08
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		1e-08
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		1e-08
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		1e-08
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		1e-08
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		1e-08
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-08
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		1e-08
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-08
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		1e-08
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		1e-08
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		1e-08
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		2e-08
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		2e-08
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		2e-08
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		2e-08
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		2e-08
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		2e-08
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		2e-08
3kk9_A	282	Camkii Substrate Complex B Length = 282		2e-08
3kk8_A	284	Camkii Substrate Complex A Length = 284		2e-08
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		2e-08
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		2e-08
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		2e-08
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		3e-08
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		3e-08
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		3e-08
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		3e-08
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		3e-08
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		3e-08
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		3e-08
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		3e-08
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		3e-08
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		3e-08
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		3e-08
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		3e-08
3soa_A	444	Full-Length Human Camkii Length = 444		3e-08
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		3e-08
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		3e-08
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		3e-08
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		3e-08
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		3e-08
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		3e-08
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		3e-08
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		3e-08
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		3e-08
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		3e-08
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		3e-08
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		3e-08
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		3e-08
4ae6_A	343	Structure And Function Of The Human Sperm-specific		3e-08
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		3e-08
4ae9_A	343	Structure And Function Of The Human Sperm-specific		3e-08
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		3e-08
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		3e-08
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		3e-08
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		3e-08
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		4e-08
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		1e-07
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		1e-07
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		1e-07
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		2e-07
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		2e-07
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		2e-07
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		2e-07
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		3e-07
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		4e-07
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		4e-07
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		5e-07
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		5e-07
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		5e-07
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		5e-07
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		6e-07
3g51_A	325	Structural Diversity Of The Active Conformation Of		6e-07
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		2e-06
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		2e-06
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		2e-06
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		3e-06
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		5e-06
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		7e-06
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		1e-05
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		1e-05
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		1e-05
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		1e-05
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		2e-05
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		2e-05
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		2e-05
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		2e-05
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		2e-05
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		2e-05
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		2e-05
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		2e-05
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-05
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		2e-05
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		3e-05
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		4e-05
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		4e-05
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		4e-05
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		4e-05
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		4e-05
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		4e-05
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		4e-05
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		4e-05
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		4e-05
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		4e-05
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		4e-05
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		4e-05
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		4e-05
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		4e-05
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		4e-05
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		4e-05
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		4e-05
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		4e-05
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		4e-05
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		4e-05
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		4e-05
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		5e-05
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		5e-05
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		5e-05
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		5e-05
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		5e-05
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		5e-05
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		5e-05
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		5e-05
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		5e-05
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		5e-05
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		7e-05
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		9e-05
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		1e-04
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		1e-04
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		1e-04
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		1e-04
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		2e-04
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		2e-04
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		2e-04
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		2e-04
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		2e-04
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		2e-04
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		2e-04
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		2e-04
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		2e-04
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		2e-04
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		2e-04
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		2e-04
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		2e-04
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		2e-04
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		2e-04
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		3e-04
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		3e-04
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		3e-04
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		3e-04
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		3e-04
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		3e-04
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		3e-04
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		3e-04
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		3e-04
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		3e-04
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		4e-04
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		4e-04
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		5e-04
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		5e-04
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		5e-04
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		5e-04
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		5e-04
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		5e-04
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		5e-04
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		5e-04
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		5e-04
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		5e-04
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		6e-04
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		6e-04
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		6e-04
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		6e-04
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		6e-04
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		6e-04
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		7e-04
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		7e-04
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		7e-04
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		7e-04
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		8e-04
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		8e-04
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		8e-04
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		8e-04
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		8e-04

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 98.6 bits (244), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 43/52 (82%), Positives = 48/52 (92%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +II YQPYGKSVDWWAYGVLLYEML GQPPFDGEDE+ELF +I +H+VSYPK
Sbjct: 190 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK 241

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/52 (75%), Positives = 47/52 (90%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +II YQPYGKSVDWWA+GVLLYEML GQ PF+GEDE+ELF +I +H+V+YPK
Sbjct: 512 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK 563

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 92.0 bits (227), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 39/52 (75%), Positives = 47/52 (90%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +II YQPYGKSVDWWA+GVLLYEML GQ PF+GEDE+ELF +I +H+V+YPK
Sbjct: 191 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK 242

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 72.4 bits (176), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +I+L Q Y  SVDWW++GVLLYEML+GQ PF G+DEEELF +I   +  YP+
Sbjct: 188 EILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR 239

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +I+L Q Y  SVDWW++GVLLYEML+GQ PF G+DEEELF +I   +  YP+
Sbjct: 189 EILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR 240

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 65.1 bits (157), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           YG +VDWWA GVLLYEML G  PF+ E+E++LF AI +  V YP
Sbjct: 201 YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP 244

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  ++  +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFP 258

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 203 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 253

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           YG++VDWW  GV++YEM+ G+ PF  +D E+LF  I    + +P+
Sbjct: 329 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 373

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +++   PY K VD WA GV+LY +LVG PPF  ED+  L+A I   +  YP
Sbjct: 200 EVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYP 250

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +++    YG++VDWW  GV++YEM+ G+ PF  +D E+LF  I    + +P+
Sbjct: 319 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 370

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +++    YG++VDWW  GV++YEM+ G+ PF  +D E+LF  I    + +P+
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 231

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +++    YG++VDWW  GV++YEM+ G+ PF  +D E+LF  I    + +P+
Sbjct: 179 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 230

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +++    YG++VDWW  GV++YEM+ G+ PF  +D E+LF  I    + +P+
Sbjct: 181 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 232

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +++   PY K VD WA GV+LY +LVG PPF  ED+  L+A I   +  YP
Sbjct: 176 EVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYP 226

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +++   PY K VD WA GV+LY +LVG PPF  ED+  L+A I   +  YP
Sbjct: 177 EVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYP 227

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +II+ + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +++    YG++VDWW  GV++YEM+ G+ PF  +D E LF  I    + +P+
Sbjct: 178 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 229

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           YG++VDWW  GV++YEM+ G+ PF  +D E LF  I    + +P+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 226

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +++    YG++VDWW  GV++YEM+ G+ PF  +D E LF  I    + +P+
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 226

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           YG++VDWW  GV++YEM+ G+ PF  +D E LF  I    + +P+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 226

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +++    YG++VDWW  GV++YEM+ G+ PF  +D E LF  I    + +P+
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 226

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+Y+M  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +++    YG++VDWW  GV++YEM+ G+ PF  +D E LF  I    + +P+
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 226

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +++   PYGK VD WA GV+LY +LVG PPF  ED+ +L+  I   +  +P
Sbjct: 203 EVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFP 253

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +++    YG++VDWW  GV++YEM+ G+ PF  +D E LF  I    + +P+
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 231

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 279

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +++   PYGK VD WA GV+LY +LVG PPF  ED+  L+  I   +  +P
Sbjct: 176 EVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFP 226

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +++   PYGK VD WA GV+LY +LVG PPF  ED+  L+  I   +  +P
Sbjct: 183 EVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFP 233

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 279

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 279

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 251

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 251

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 194 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 244

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P
Sbjct: 195 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 245

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +++  Q +  S DWW+YGVL++EML G  PF G+D +E    I    +  P+
Sbjct: 200 EVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ 251

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +++   PY K VD WA GV+LY +LVG PPF  ED+  L+A I   +  YP
Sbjct: 177 EVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYP 227

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +++  + YGK VD WA GV+LY +LVG PPF  ED+ +L+  I   +  +P
Sbjct: 176 EVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFP 226

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +++   PYGK VD WA GV+LY +LVG PPF  ED+  L+  I   +  +P
Sbjct: 176 EVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFP 226

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 33/51 (64%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +++  +PY KS+DWW++G+L+YEML G  PF   +  + +  I +  + +P
Sbjct: 173 EVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP 223

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +++   PYGK VD WA GV+LY +LVG PPF  ED+  L+  I   +  +P
Sbjct: 194 EVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFP 244

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 15  QDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPF------- 67
           ++ +RPG  ++      + +  +I+  + YG SVDWWA GVL++EM+ G+ PF       
Sbjct: 201 KEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 260
Query: 68  --DGEDEEELFAAITDHSVSYPK 88
             D   E+ LF  I +  +  P+
Sbjct: 261 NPDQNTEDYLFQVILEKQIRIPR 283

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 15  QDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPF------- 67
           ++ +RPG  ++      + +  +I+  + YG SVDWWA GVL++EM+ G+ PF       
Sbjct: 169 KEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 228
Query: 68  --DGEDEEELFAAITDHSVSYPK 88
             D   E+ LF  I +  +  P+
Sbjct: 229 NPDQNTEDYLFQVILEKQIRIPR 251

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 15  QDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPF------- 67
           ++ +RPG  ++      + +  +I+  + YG SVDWWA GVL++EM+ G+ PF       
Sbjct: 154 KEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 213
Query: 68  --DGEDEEELFAAITDHSVSYPK 88
             D   E+ LF  I +  +  P+
Sbjct: 214 NPDQNTEDYLFQVILEKQIRIPR 236

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 15  QDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPF------- 67
           ++ +RPG  ++      + +  +I+  + YG SVDWWA GVL++EM+ G+ PF       
Sbjct: 158 KEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 217
Query: 68  --DGEDEEELFAAITDHSVSYPK 88
             D   E+ LF  I +  +  P+
Sbjct: 218 NPDQNTEDYLFQVILEKQIRIPR 240

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +I++   + ++VDWW+ G L+Y+ML G PPF GE+ ++    I    ++ P
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP 241

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +I++   + ++VDWW+ G L+Y+ML G PPF GE+ ++    I    ++ P
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP 241

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +++  + + +S DWW++GVL++EML G  PF G+D +E    I    +  P+
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ 247

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +++  + + +S DWW++GVL++EML G  PF G+D +E    I    +  P+
Sbjct: 197 EVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ 248

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD 81
           +++  QPY ++VDWW  G +LYEML G PPF   +  E++  I +
Sbjct: 209 EVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN 253

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +++  + + +S DWW++GVL++EML G  PF G+D +E    I    +  P+
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ 247

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH--SVSYP 87
           YG+  DWW+ GV LYEMLVG  PF  +     ++ I +H  S+++P
Sbjct: 255 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFP 300

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH--SVSYP 87
           YG+  DWW+ GV LYEMLVG  PF  +     ++ I +H  S+++P
Sbjct: 255 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFP 300

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH--SVSYP 87
           YG+  DWW+ GV LYEMLVG  PF  +     ++ I +H  S+++P
Sbjct: 250 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFP 295

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH--SVSYPKMA 90
           YG+  DWW+ GV L+EMLVG  PF  +     ++ I DH  S+ +P+ A
Sbjct: 256 YGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDA 304

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD 81
           +++  +PY K+VD W+ GV+ Y +L G PPF  E E +LF  I +
Sbjct: 177 EVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKE 221

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +++  +PY K+VD W+ GV+ Y +L G PPF  E++ +LF  I
Sbjct: 192 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQI 234

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSY 86
           +I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A IT  SVSY
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT--SVSY 235

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSY 86
           +I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A IT  SVSY
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT--SVSY 235

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSY 86
           +I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A IT  SVSY
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT--SVSY 235

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH 82
           YG   DWW+ GV +YEML G+ PF  E   E +  I +H
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +++  +PY K+VD W+ GV+ Y +L G PPF  E++ +LF  I
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQI 230

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +++  +PY K+VD W+ GV+ Y +L G PPF  E++ +LF  I
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQI 230

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W  GVL YE+LVG PPF+     E +  I    + +P
Sbjct: 198 HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFP 241

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +++  +PY K+VD W+ GV+ Y +L G PPF  E++ +LF  I
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQI 230

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH 82
           YG   DWW+ GV +YEML G+ PF  E   E +  I +H
Sbjct: 274 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 312

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH 82
           YG   DWW+ GV +YEML G+ PF  E   E +  I +H
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSY 86
           +I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A IT  +VSY
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT--AVSY 235

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +++  +PY K+VD W+ GV+ Y +L G PPF  E++ +LF  I
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQI 230

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSY 86
           +I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A IT  +VSY
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT--AVSY 235

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSY 86
           +I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A IT  +VSY
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT--AVSY 235

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPF--DGE--DEEELFAAITDHSVSYPK 88
           + K+VDWW+ GVL+YE+L G  PF  DGE   + E+   I      YP+
Sbjct: 239 HDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ 287

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 228

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 200 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 243

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           ++I  + + + VD W  GVL YE LVG PPFD     E    I +  + +P
Sbjct: 183 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP 233

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 252

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           ++I  + + + VD W  GVL YE LVG PPFD     E    I +  + +P
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP 232

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 228

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 227

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 227

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 231

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 227

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 231

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 231

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 231

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 252

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 225

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 223

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 230

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 231

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSY 86
           +L + Y +  D W+ GV+LY +L G PPF G+ ++E+   +     S+
Sbjct: 194 VLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSF 241

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG PPF+    +E +  I+    ++P
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP 230

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG PPF+    +E +  I+    ++P
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP 230

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + + VD W+ GVL YE LVG+PPF+    ++ +  I+    ++P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFP 226

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSY 86
           +L + Y +  D W+ GV+LY +L G PPF G+ ++E+   +     S+
Sbjct: 177 VLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSF 224

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSY 86
           +I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A ++  +V+Y
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS--AVNY 234

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSY 86
           +I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A ++  +V+Y
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS--AVNY 234

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT 80
           +I+ Y+P G   D W+ GV+ Y +L G  PF GE ++E    I+
Sbjct: 181 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS 224

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT 80
           +I+ Y+P G   D W+ GV+ Y +L G  PF GE ++E    I+
Sbjct: 202 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS 245

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPF 67
           +++  + Y  S DWWA G LLYEM+ GQ PF
Sbjct: 355 EVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT 80
           +I+ Y+P G   D W+ GV+ Y +L G  PF GE ++E    I+
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS 231

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPF 67
           +++  + Y  S DWWA G LLYEM+ GQ PF
Sbjct: 355 EVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSY 86
           +I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A ++  +V+Y
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS--AVNY 234

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSY 86
           +I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A ++  +V+Y
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS--AVNY 234

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSY 86
           +I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A ++  +V+Y
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS--AVNY 234

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSY 86
           +I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A ++  +V+Y
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS--AVNY 234

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSY 86
           +I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A ++  +V+Y
Sbjct: 186 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS--AVNY 233

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSY 86
           +I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A ++  +V+Y
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS--AVNY 234

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSY 86
           +I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A ++  +V+Y
Sbjct: 186 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS--AVNY 233

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSY 86
           +I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A ++  +V+Y
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS--AVNY 234

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT 80
           +I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A ++
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSY 86
           +I+ Y P   + D W  G++ Y +L    PF GED +E +  I+  +V Y
Sbjct: 203 EILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY 252

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT 80
           +I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A ++
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPF 67
           YGK VD WA GV+L+ +L G PPF
Sbjct: 282 YGKEVDLWACGVILFTLLAGSPPF 305

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD 81
           ++IL   YG  +D W+ G +L E+L G P   GEDE +  A + +
Sbjct: 269 EVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIE 313

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 30  AYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           AY+ +  ++I    + K  D W+YGVLL+E+L G+ PF G D   +   +  + ++ P
Sbjct: 177 AYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALP 234

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD 81
           ++IL   YG  +D W+ G +L E+L G P   GEDE +  A + +
Sbjct: 269 EVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIE 313

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT 80
           +I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A ++
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT 80
           +I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A ++
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD 81
           ++IL   YG  +D W+ G +L E+L G P   GEDE +  A + +
Sbjct: 269 EVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIE 313

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 27/41 (65%)
Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +L + Y +  D W+ GV++Y +L G PPF G++++++   +
Sbjct: 219 VLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV 259

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +++  +PYGK VD W  GV+L+ +L G  PF G  +E LF  I
Sbjct: 205 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGI 246

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +L + Y +  D W+ GV+L+ +L G PPF G+ ++E+   +
Sbjct: 209 VLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKV 249

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +L+  Y +  D W+ GV+LY +L G PPF+G +E ++   +
Sbjct: 199 VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 239

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +L+  Y +  D W+ GV+LY +L G PPF+G +E ++   +
Sbjct: 199 VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 239

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +L   YG   D W+ GV++Y +L G PPF    + E+   I + + ++P+
Sbjct: 196 VLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPE 245

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +L   YG   D W+ GV++Y +L G PPF    + E+   I + + ++P+
Sbjct: 179 VLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPE 228

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 42  QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD 81
           + Y  S+D W+ G +L EM+ G+P F G ++EE    I D
Sbjct: 184 RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFD 223

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +L+  Y +  D W+ GV+LY +L G PPF+G +E ++   +
Sbjct: 222 VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 262

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +++  +PYGK VD W  GV+L+ +L G  PF G  +E LF  I
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGI 244

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +L+  Y +  D W+ GV+LY +L G PPF+G +E ++   +
Sbjct: 223 VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 263

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +++  +PYGK VD W  GV+L+ +L G  PF G  +E LF  I
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGI 244

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +++  +   KS D WA G ++Y+++ G PPF   +E  +FA I      +P+
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPE 255

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/22 (63%), Positives = 20/22 (90%)
Query: 49  DWWAYGVLLYEMLVGQPPFDGE 70
           D ++ G++LYEMLVG+PPF+GE
Sbjct: 194 DIYSIGIVLYEMLVGEPPFNGE 215

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE----EELFAAITDHSVSYP 87
           +++L + Y  SVD++A GV LYEM+  + PF    E    +EL   + + +V+YP
Sbjct: 359 ELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP 413

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE----EELFAAITDHSVSYP 87
           +++L + Y  SVD++A GV LYEM+  + PF    E    +EL   + + +V+YP
Sbjct: 359 ELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP 413

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE----EELFAAITDHSVSYP 87
           +++L + Y  SVD++A GV LYEM+  + PF    E    +EL   + + +V+YP
Sbjct: 359 ELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP 413

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE----EELFAAITDHSVSYP 87
           +++L + Y  SVD++A GV LYEM+  + PF    E    +EL   + + +V+YP
Sbjct: 359 ELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP 413

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 46  KSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           KS D WA G ++Y+++ G PPF   +E  +FA I      +P+
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPE 255

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPF 67
           YGK VD W+ GV++Y +L G PPF
Sbjct: 206 YGKEVDMWSTGVIMYTLLAGSPPF 229

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +L+  Y +  D W+ GV+LY +L G PPF+G +E ++   +
Sbjct: 205 VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 245

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPF 67
           YGK VD W+ GV++Y +L G PPF
Sbjct: 206 YGKEVDMWSTGVIMYTLLAGSPPF 229

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 45  GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           G  VD W+ GV+LY ML  + PFD E    LF  I++   + PK
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK 224

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 45  GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           G  VD W+ GV+LY ML  + PFD E    LF  I++   + PK
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK 233

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 45  GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           G  VD W+ GV+LY ML  + PFD E    LF  I++   + PK
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK 228

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 45  GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD 81
           G  VD W+ GV+LY +L G  PFD +    LF  I D
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICD 230

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 44  YGKSVDWWAYGVLLYEMLVGQPPF 67
           YGK VD W+ GV++Y +L G PPF
Sbjct: 193 YGKEVDMWSTGVIMYTLLAGSPPF 216

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	92
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	3e-27
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	3e-27
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	6e-27
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	7e-27
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	6e-26
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-25
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	3e-25
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	5e-25
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	4e-24
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	1e-23
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-23
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	5e-23
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	9e-23
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	3e-22
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-21
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	4e-20
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	9e-20
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-19
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	5e-19
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	3e-18
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	5e-18
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-16
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	5e-16
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	5e-16
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-14
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-14
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-14
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-14
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	3e-14
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	4e-14
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	4e-14
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	4e-14
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	6e-14
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	7e-14
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	9e-14
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-13
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-13
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-13
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-13
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-13
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	3e-13
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-13
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	4e-13
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	6e-13
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	8e-13
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-12
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-12
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-12
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-12
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-12
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-12
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	5e-12
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	6e-12
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	7e-12
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	8e-12
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-11
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-11
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-11
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-11
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	5e-11
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	6e-11
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	7e-11
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	7e-11
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-10
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	3e-10
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	5e-10
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	6e-10
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	7e-10
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	9e-10
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-09
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-09
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-09
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	3e-09
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	4e-09
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	6e-09
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	7e-09
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	8e-09
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-08
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-08
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-08
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-08
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-08
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	3e-08
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-08
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	4e-08
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	2e-07
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-07
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-07
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	3e-07
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	4e-07
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	4e-07
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	9e-07
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	1e-06
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-06
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-06
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-06
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-06
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-06
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-06
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-06
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-06
2a19_B	284	Interferon-induced, double-stranded RNA-activated	4e-06
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	5e-06
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	6e-06
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	7e-06
3ork_A	311	Serine/threonine protein kinase; structural genomi	1e-05
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-05
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-05
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-05
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	4e-05
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	4e-05
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	5e-05
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	5e-05
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	5e-05
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	5e-05
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	6e-05
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-04
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-04
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	1e-04
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	2e-04
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-04
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-04
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-04
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-04
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-04
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	3e-04
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	4e-04
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	4e-04
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	4e-04
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	4e-04
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	4e-04
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	4e-04
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	4e-04
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	5e-04
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-04
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	6e-04
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	6e-04
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	6e-04
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	6e-04
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	7e-04
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	9e-04
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	9e-04

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score =  100 bits (251), Expect = 3e-27
 Identities = 39/51 (76%), Positives = 46/51 (90%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           II YQPYGKSVDWWA+GVLLYEML GQ PF+GEDE+ELF +I +H+V+YPK
Sbjct: 192 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK 242

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score =  100 bits (251), Expect = 3e-27
 Identities = 28/51 (54%), Positives = 35/51 (68%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           I+    YG +VDWWA GVLLYEML G  PF+ E+E++LF AI +  V YP 
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT 245

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score =  101 bits (253), Expect = 6e-27
 Identities = 39/51 (76%), Positives = 46/51 (90%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           II YQPYGKSVDWWA+GVLLYEML GQ PF+GEDE+ELF +I +H+V+YPK
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK 563

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 99.2 bits (248), Expect = 7e-27
 Identities = 31/51 (60%), Positives = 39/51 (76%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           I+L Q Y  SVDWW++GVLLYEML+GQ PF G+DEEELF +I   +  YP+
Sbjct: 189 ILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR 239

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 96.5 bits (241), Expect = 6e-26
 Identities = 20/51 (39%), Positives = 32/51 (62%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           ++    YG++VDWW  GV++YEM+ G+ PF  +D E LF  I    + +P+
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 226

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 96.2 bits (240), Expect = 1e-25
 Identities = 19/51 (37%), Positives = 29/51 (56%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           ++  QPY ++VDWW  G +LYEML G PPF   +  E++  I +  +    
Sbjct: 210 VLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKP 260

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 94.5 bits (236), Expect = 3e-25
 Identities = 18/51 (35%), Positives = 31/51 (60%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           I++   + ++VDWW+ G L+Y+ML G PPF GE+ ++    I    ++ P 
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP 242

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 94.2 bits (235), Expect = 5e-25
 Identities = 18/51 (35%), Positives = 31/51 (60%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           ++  + + +S DWW++GVL++EML G  PF G+D +E    I    +  P+
Sbjct: 197 VVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ 247

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 92.9 bits (231), Expect = 4e-24
 Identities = 20/51 (39%), Positives = 33/51 (64%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           ++    YG++VDWW  GV++YEM+ G+ PF  +D E+LF  I    + +P+
Sbjct: 320 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 370

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 90.8 bits (226), Expect = 1e-23
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 9/60 (15%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPF---------DGEDEEELFAAITDHSVSYPK 88
           I+  + YG SVDWWA GVL++EM+ G+ PF         D   E+ LF  I +  +  P+
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 240

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 90.9 bits (226), Expect = 2e-23
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 9/60 (15%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPF---------DGEDEEELFAAITDHSVSYPK 88
           I+  + YG SVDWWA GVL++EM+ G+ PF         D   E+ LF  I +  +  P+
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 283

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 88.7 bits (221), Expect = 5e-23
 Identities = 18/51 (35%), Positives = 32/51 (62%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           ++  +PY KS+DWW++G+L+YEML G  PF   +  + +  I +  + +P 
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP 224

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 89.5 bits (222), Expect = 9e-23
 Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 4/55 (7%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE----EELFAAITDHSVSYPK 88
           ++L + Y  SVD++A GV LYEM+  + PF    E    +EL   + + +V+YP 
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD 414

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 87.9 bits (218), Expect = 3e-22
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE----EELFAAITDHSVSYPK 88
           ++  + Y  S DWWA G LLYEM+ GQ PF    +    EE+   + +    Y +
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSE 410

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 84.3 bits (209), Expect = 3e-21
 Identities = 23/51 (45%), Positives = 31/51 (60%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P 
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 80.7 bits (200), Expect = 4e-20
 Identities = 15/51 (29%), Positives = 27/51 (52%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           ++  +   KS D WA G ++Y+++ G PPF   +E  +F  I      +P+
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 253

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 80.4 bits (199), Expect = 9e-20
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 6/57 (10%)

Query: 38  IILYQPYG--KSVDWWAYGVLLYEMLVGQPPFDGEDE----EELFAAITDHSVSYPK 88
           I+     G  K+VDWW+ GVL+YE+L G  PF  + E     E+   I      YP+
Sbjct: 231 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ 287

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 79.8 bits (197), Expect = 2e-19
 Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 2/57 (3%)

Query: 33  ILLFQ--IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           IL           YG   DWWA GV  YEM  GQ PF  +   E +  I  +     
Sbjct: 234 ILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLS 290

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 78.6 bits (194), Expect = 5e-19
 Identities = 20/55 (36%), Positives = 26/55 (47%)

Query: 33  ILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           IL         YG   DWW+ GV +YEML G+ PF  E   E +  I +H   + 
Sbjct: 247 ILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ 301

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 76.5 bits (188), Expect = 3e-18
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 3/50 (6%)

Query: 42  QPYGKSVDWWAYGVLLYEMLVGQPPFDGE---DEEELFAAITDHSVSYPK 88
             Y  S DW++ G +L+++L G  PF      D+ E+       +V  P 
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD 415

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 75.9 bits (187), Expect = 5e-18
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 38  IILYQP----YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           ++  Q     YG+  DWW+ GV LYEMLVG  PF  +     ++ I +H  S  
Sbjct: 240 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT 293

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 71.2 bits (175), Expect = 2e-16
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDG---EDEEELFAAITDHSVSYPK 88
           Y  +VDWW+ GV  YE+L G+ P+        +E+        V+YP 
Sbjct: 194 YSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPS 241

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 69.2 bits (170), Expect = 5e-16
 Identities = 18/51 (35%), Positives = 30/51 (58%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +I  + + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P 
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 228

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 69.5 bits (171), Expect = 5e-16
 Identities = 19/51 (37%), Positives = 26/51 (50%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +I  + + + VD W  GVL YE LVG PPFD     E    I +  + +P 
Sbjct: 183 MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP 233

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 65.8 bits (161), Expect = 2e-14
 Identities = 19/50 (38%), Positives = 28/50 (56%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A IT  S  + 
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD 238

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 64.9 bits (159), Expect = 2e-14
 Identities = 17/50 (34%), Positives = 27/50 (54%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           I+ Y+P G   D W+ GV+ Y +L G  PF GE ++E    I+  +  + 
Sbjct: 182 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD 231

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 64.9 bits (159), Expect = 2e-14
 Identities = 24/50 (48%), Positives = 31/50 (62%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           ++   PY K VD WA GV+LY +LVG PPF  ED+  L+A I   +  YP
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYP 227

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 65.0 bits (159), Expect = 2e-14
 Identities = 19/50 (38%), Positives = 28/50 (56%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A IT  S  + 
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD 238

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 64.9 bits (159), Expect = 3e-14
 Identities = 19/50 (38%), Positives = 29/50 (58%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           ++  +PY K+VD W+ GV+ Y +L G PPF  E E +LF  I +    + 
Sbjct: 178 VLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFE 227

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 64.6 bits (158), Expect = 4e-14
 Identities = 16/50 (32%), Positives = 28/50 (56%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A ++  +  + 
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 64.6 bits (158), Expect = 4e-14
 Identities = 24/50 (48%), Positives = 31/50 (62%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           ++   PY K VD WA GV+LY +LVG PPF  ED+  L+A I   +  YP
Sbjct: 201 VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYP 250

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 64.6 bits (158), Expect = 4e-14
 Identities = 17/50 (34%), Positives = 26/50 (52%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           I+ Y P   + D W  G++ Y +L    PF GED +E +  I+  +V Y 
Sbjct: 204 ILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYS 253

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 64.2 bits (157), Expect = 6e-14
 Identities = 23/51 (45%), Positives = 32/51 (62%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +++   PYGK VD WA GV+LY +LVG PPF  ED+  L+  I   +  +P
Sbjct: 183 EVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFP 233

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 63.8 bits (156), Expect = 7e-14
 Identities = 11/50 (22%), Positives = 23/50 (46%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +  +     + D W+ G L+Y +L G  PF  E  +++   I +   ++ 
Sbjct: 174 VHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFD 223

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 63.6 bits (155), Expect = 9e-14
 Identities = 18/51 (35%), Positives = 25/51 (49%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +I+  +P G   D WA GVL Y +L G  PF GED+ E    +      + 
Sbjct: 220 EIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD 270

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 63.7 bits (155), Expect = 1e-13
 Identities = 15/50 (30%), Positives = 24/50 (48%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +   +P G   D W+ GVL Y +L G  PF GE+++E    +     +  
Sbjct: 327 VAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 376

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 63.3 bits (154), Expect = 1e-13
 Identities = 13/46 (28%), Positives = 26/46 (56%)

Query: 42  QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           + YG   D W+ GVLL+ +L+G  PF G ++ +  + + +  + + 
Sbjct: 251 ESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFE 296

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 62.6 bits (153), Expect = 2e-13
 Identities = 15/41 (36%), Positives = 25/41 (60%)

Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +L   Y +  D W+ GV+LY +L G PPF G++E ++   +
Sbjct: 194 VLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 62.2 bits (152), Expect = 2e-13
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +L   YG   D W+ GV++Y +L G PPF    + E+   I
Sbjct: 179 VLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKI 219

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 62.4 bits (152), Expect = 3e-13
 Identities = 13/51 (25%), Positives = 22/51 (43%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +++ Y       D W+ GV+ Y +L G  PF G+++ E    I        
Sbjct: 258 EVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLE 308

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 62.4 bits (152), Expect = 3e-13
 Identities = 15/49 (30%), Positives = 27/49 (55%)

Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +L   Y +  D W+ GV+LY +L G PPF G++E ++   +     ++ 
Sbjct: 194 VLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 62.0 bits (151), Expect = 4e-13
 Identities = 15/49 (30%), Positives = 28/49 (57%)

Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +L+  Y +  D W+ GV+LY +L G PPF+G +E ++   +     ++ 
Sbjct: 199 VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 61.7 bits (150), Expect = 4e-13
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDE-EELFAAITDHSVSYP 87
            G  VD W+ G+ LY M     PF  +    ELF  I   ++ YP
Sbjct: 229 NGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYP 273

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 61.1 bits (149), Expect = 6e-13
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 41  YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +  YGK VD W+ GV++Y +L G PPF    +  +   I   +  + 
Sbjct: 203 HPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG 249

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 60.7 bits (148), Expect = 8e-13
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +  +      D W+ GV++Y +L G  PF G   EE+    
Sbjct: 197 VFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKA 237

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 60.5 bits (147), Expect = 1e-12
 Identities = 13/49 (26%), Positives = 28/49 (57%)

Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +L + Y +  D W+ GV++Y +L G PPF G++++++   +      + 
Sbjct: 219 VLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD 267

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 60.4 bits (146), Expect = 1e-12
 Identities = 9/48 (18%), Positives = 16/48 (33%)

Query: 43  PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPKMA 90
               S D WA G+++Y +     P   +        I     + P+  
Sbjct: 289 LMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRSCKNIPQPV 336

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 60.5 bits (147), Expect = 1e-12
 Identities = 14/49 (28%), Positives = 28/49 (57%)

Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +L + Y +  D W+ GV+L+ +L G PPF G+ ++E+   +     ++ 
Sbjct: 209 VLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD 257

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 60.1 bits (146), Expect = 2e-12
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 42  QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
             YGK VD WA GV+L+ +L G PPF    +  +   I
Sbjct: 280 PGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMI 317

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 60.0 bits (146), Expect = 2e-12
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG---EDEEELFAAITDHSVSYP 87
           ++  Q Y  + D W+ GVLLY ML G  PF     +  EE+ A I     S  
Sbjct: 191 VLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLS 243

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 59.3 bits (143), Expect = 4e-12
 Identities = 7/45 (15%), Positives = 13/45 (28%)

Query: 43  PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
               + D W  G+ +Y +     P   +        I     + P
Sbjct: 293 LMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKNIP 337

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 58.9 bits (143), Expect = 5e-12
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           ++  +PYGK VD W  GV+L+ +L G  PF G   E LF  I
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGI 244

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 58.3 bits (142), Expect = 6e-12
 Identities = 13/51 (25%), Positives = 22/51 (43%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           I     +G   D W+ G + Y +L+G+PPFD +  +     +       P 
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPS 233

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 58.5 bits (142), Expect = 7e-12
 Identities = 13/43 (30%), Positives = 24/43 (55%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +++  + Y KS D W+ GV++Y +L G PPF     + +   +
Sbjct: 199 EVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGM 241

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 58.1 bits (141), Expect = 8e-12
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 7/50 (14%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE-------EELFAAI 79
           +++    Y +S D W+ GV+LY ML GQ PF   D         E+   I
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKI 228

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 57.7 bits (140), Expect = 1e-11
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 40  LYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE-DEEELFAAITDHSVSYP 87
               Y ++VD W+ GV+L+  L G PPF     +  L   IT    ++ 
Sbjct: 192 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 57.8 bits (140), Expect = 1e-11
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 41  YQPYGKSVDWWAYGVLLYEMLVGQPPFDGED-EEELFAAITDHSVSYP 87
              Y ++VD W+ GV+L+  L G PPF     +  L   IT    ++ 
Sbjct: 318 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 365

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 57.7 bits (140), Expect = 1e-11
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE-DEEELFAAITDHSVSYP 87
           I+    YG  VD W+ G++ Y +L G  PF  E  ++ +F  I +    + 
Sbjct: 221 ILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFI 271

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 56.9 bits (138), Expect = 2e-11
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 4/45 (8%)

Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED----EEELFAAI 79
              + Y KS D W+ GV++Y +L G PPF           +   I
Sbjct: 170 TTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 214

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 55.8 bits (135), Expect = 5e-11
 Identities = 16/51 (31%), Positives = 29/51 (56%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           ++  + +   VD W+ G ++Y +LVG+PPF+    +E +  I  +  S PK
Sbjct: 212 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK 262

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 55.9 bits (135), Expect = 6e-11
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 4/47 (8%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED----EEELFAAI 79
           +++  + Y KS D W+ GV++Y +L G PPF           +   I
Sbjct: 233 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 279

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 55.5 bits (134), Expect = 7e-11
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           I   +PY    D WA G +LYE+   +  F+    + L   I
Sbjct: 196 ICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI 237

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 55.3 bits (134), Expect = 7e-11
 Identities = 16/51 (31%), Positives = 29/51 (56%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           ++  + +   VD W+ G ++Y +LVG+PPF+    +E +  I  +  S PK
Sbjct: 186 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK 236

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 55.0 bits (133), Expect = 1e-10
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
            +    Y +  D W+ G LLYE+    PPF    ++EL   I
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 53.8 bits (130), Expect = 3e-10
 Identities = 15/57 (26%), Positives = 23/57 (40%)

Query: 33  ILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPKM 89
           ++         Y K  D W+ GV+LY +L G PPF G    +      +   +   M
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNM 248

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 53.2 bits (128), Expect = 5e-10
 Identities = 13/52 (25%), Positives = 20/52 (38%)

Query: 28  PSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           P  Y   + +    + YG +VD W+ GV  Y    G  PF   +       +
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 52.9 bits (127), Expect = 6e-10
 Identities = 13/52 (25%), Positives = 20/52 (38%)

Query: 28  PSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           P  Y   + +    + YG +VD W+ GV  Y    G  PF   +       +
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 52.8 bits (126), Expect = 7e-10
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT 80
           ++  + Y  +VD+W++G L +E + G  PF    +   +    
Sbjct: 194 LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 236

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 52.3 bits (126), Expect = 9e-10
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 3/48 (6%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDE--EELFAAI-TDHSVSYPK 88
                D W+ G +LY M  G+ PF        +L A I  +H + +P 
Sbjct: 216 ISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD 263

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 52.4 bits (126), Expect = 1e-09
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 35  LFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEE-ELFAAITDHSVSYP 87
           LF +  +    +  D W+ G +LY M+ G+ P+D   ++ +  A    + +S P
Sbjct: 214 LFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIP 267

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 51.6 bits (124), Expect = 2e-09
 Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 3/50 (6%)

Query: 42  QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE--EELFAAI-TDHSVSYPK 88
                  D W+ G +LY M  G+ PF        +L A I  +H + +P 
Sbjct: 195 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD 244

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 51.6 bits (123), Expect = 2e-09
 Identities = 5/32 (15%), Positives = 12/32 (37%)

Query: 42  QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEE 73
             +  +++ W  G+ +Y +     PF      
Sbjct: 268 ATFTHALNAWQLGLSIYRVWCLFLPFGLVTPG 299

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 51.1 bits (123), Expect = 3e-09
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 38  IILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +   + Y G  VD W+ GV+LY ++ G  PFDG++ +EL   +       P 
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF 235

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 50.6 bits (121), Expect = 4e-09
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 3/48 (6%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDE--EELFAAIT-DHSVSYPK 88
                D W+ G +LY M  G+ PF        +L A I  +H + +P 
Sbjct: 244 ISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD 291

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 50.0 bits (120), Expect = 6e-09
 Identities = 9/45 (20%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           Y + +D ++ G++ +EM+   P   G +   +   +   S+ +P 
Sbjct: 208 YNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKLRSVSIEFPP 250

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 50.0 bits (120), Expect = 7e-09
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 45  GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           GK++D WA GV LY  + GQ PF  E    L + I   ++ +P 
Sbjct: 218 GKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPD 261

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 49.7 bits (119), Expect = 8e-09
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD 81
           +IL   YG  +D W+ G +L E+L G P   GEDE +  A + +
Sbjct: 270 VILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIE 313

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 49.2 bits (118), Expect = 1e-08
 Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQP-PFDGEDEEELFAAI 79
           +L   YG + D ++ G+ + E+      P  GE  ++L    
Sbjct: 227 LLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGY 268

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 49.0 bits (117), Expect = 2e-08
 Identities = 8/49 (16%), Positives = 19/49 (38%), Gaps = 1/49 (2%)

Query: 41  YQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAITDHSVSYPK 88
            +    +VD ++ G + Y ++  G  PF    + +    +   S+    
Sbjct: 203 KENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLH 251

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 48.6 bits (116), Expect = 2e-08
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD 81
           ++L  PY  ++D W+ G +L EM  G+P F G +E +    I +
Sbjct: 229 VLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE 272

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 48.6 bits (116), Expect = 2e-08
 Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 4/58 (6%)

Query: 35  LFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPKMAVF 92
           +  +    P G+  D WA G +LY +   Q PF    E+     I +   S P     
Sbjct: 221 IIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF----EDGAKLRIVNGKYSIPPHDTQ 274

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 48.1 bits (115), Expect = 3e-08
 Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEE--ELFAAI 79
            I    Y    D W+ G LLYEM   Q PF G+      L   I
Sbjct: 207 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI 250

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 48.0 bits (114), Expect = 3e-08
 Identities = 7/37 (18%), Positives = 16/37 (43%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE 74
           ++  +P+   +D++     +Y ML G       +  E
Sbjct: 256 MLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE 292

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 48.1 bits (115), Expect = 3e-08
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 7/52 (13%)

Query: 38  IILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
            I    Y       W+ G+LLY+M+ G  PF+ + E      I +  + +P 
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHFPA 254

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 47.7 bits (114), Expect = 4e-08
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 7/52 (13%)

Query: 38  IILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
            I Y  Y G+S   W+ G+LLY+M+ G  PF+ ++E      I    V + +
Sbjct: 219 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ 264

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 46.2 bits (110), Expect = 2e-07
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +IL   + +  D W+ G +L+E   G   F   +  E    +
Sbjct: 210 VILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMM 251

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 45.8 bits (109), Expect = 2e-07
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +IL   +  S D W++G +L E+  G   F   +  E  A +
Sbjct: 230 VILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMM 271

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 45.5 bits (108), Expect = 3e-07
 Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 42  QPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEE 74
           +   +S+D ++ G + Y +L  G+ PF  +   E
Sbjct: 214 RRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 45.0 bits (107), Expect = 3e-07
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 38  IILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELF 76
           ++L Q Y GK  D W+ GV LY MLVG  PF+  +E   +
Sbjct: 188 VLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY 227

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 45.0 bits (107), Expect = 4e-07
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 38  IILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +I  + Y G  VD W+ G++LY MLVG+ PFD E    LF  +       P 
Sbjct: 178 VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPD 229

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 45.0 bits (107), Expect = 4e-07
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +IL   + +  D W+ G +L E  +G   F   D +E  A +
Sbjct: 205 VILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMM 246

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 43.8 bits (104), Expect = 9e-07
 Identities = 15/32 (46%), Positives = 21/32 (65%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG 69
           +I    + K  D W+YGVLL+E+L G+ PF G
Sbjct: 185 VIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 43.9 bits (104), Expect = 1e-06
 Identities = 9/38 (23%), Positives = 20/38 (52%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL 75
           ++L  P+G   D W+   L++E++ G   F+ ++    
Sbjct: 206 VLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSY 243

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 43.6 bits (103), Expect = 1e-06
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 38  IILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +I  + Y G  VD W+ GV+LY +L G  PFD +    LF  I
Sbjct: 186 VISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKI 228

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 43.5 bits (103), Expect = 1e-06
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 42  QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
            P+ K  D +A G + YE+   + PF  +  E +   +
Sbjct: 218 LPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQM 255

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 38  IILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +I  + Y G  VD W+ GV+LY +L G  PFD E    LF  I       P+
Sbjct: 181 VISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE 232

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 43.0 bits (102), Expect = 2e-06
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 45  GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           G  VD W+ GV LY +  G  PF+G++  +LF  I   S + P 
Sbjct: 191 GFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPG 234

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 43.1 bits (102), Expect = 2e-06
 Identities = 8/32 (25%), Positives = 19/32 (59%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG 69
           ++  +P  +  D +++GV+L+E+   Q P+  
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELATLQQPWGN 241

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 42.8 bits (101), Expect = 2e-06
 Identities = 9/39 (23%), Positives = 12/39 (30%)

Query: 49  DWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           D    G  LY +LV + P          A     +   P
Sbjct: 184 DIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQP 222

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 42.3 bits (100), Expect = 3e-06
 Identities = 8/32 (25%), Positives = 19/32 (59%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG 69
           +     Y +  D +++G++L+E++  + PFD 
Sbjct: 174 VFEGSNYSEKCDVFSWGIILWEVITRRKPFDE 205

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 42.3 bits (100), Expect = 4e-06
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEML-VGQPPFDGED 71
            I  Q YGK VD +A G++L E+L V    F+   
Sbjct: 192 QISSQDYGKEVDLYALGLILAELLHVCDTAFETSK 226

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 41.8 bits (98), Expect = 5e-06
 Identities = 10/45 (22%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH 82
           +++   Y    D W+   + +E+  G   F+    EE      DH
Sbjct: 264 VLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRD-EDH 307

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 41.6 bits (98), Expect = 6e-06
 Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 38  IILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDE 72
           +++  PY G  ++ W+ GV LY ++  + PF   +E
Sbjct: 200 VLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE 235

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 41.4 bits (98), Expect = 7e-06
 Identities = 14/22 (63%), Positives = 20/22 (90%)

Query: 49  DWWAYGVLLYEMLVGQPPFDGE 70
           D ++ G++LYEMLVG+PPF+GE
Sbjct: 194 DIYSIGIVLYEMLVGEPPFNGE 215

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 40.7 bits (96), Expect = 1e-05
 Identities = 11/22 (50%), Positives = 17/22 (77%)

Query: 49  DWWAYGVLLYEMLVGQPPFDGE 70
           D ++ G +LYE+L G+PPF G+
Sbjct: 201 DVYSLGCVLYEVLTGEPPFTGD 222

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 40.8 bits (96), Expect = 1e-05
 Identities = 9/28 (32%), Positives = 18/28 (64%)

Query: 42  QPYGKSVDWWAYGVLLYEMLVGQPPFDG 69
           + Y +  D +++ ++LY +L G+ PFD 
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPFDE 230

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 39.9 bits (94), Expect = 2e-05
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 41  YQPYGKSVDWWAYGVLLYEMLVGQPPFDG 69
                +S D W++ VLL+E++  + PF  
Sbjct: 185 EDTNRRSADMWSFAVLLWELVTREVPFAD 213

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 39.6 bits (93), Expect = 3e-05
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 41  YQPYGKSVDWWAYGVLLYEMLVGQPPFDG 69
             PY    D +A+G++LYE++ GQ P+  
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSN 227

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 39.1 bits (92), Expect = 4e-05
 Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 38  IILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDE 72
           ++  + +  + VD W+ G++L  ML G+ P+D   +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 39.2 bits (92), Expect = 5e-05
 Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 38  IILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDE 72
           ++  + +  + VD W+ G++L  ML G+ P+D   +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 39.1 bits (91), Expect = 5e-05
 Identities = 6/27 (22%), Positives = 11/27 (40%)

Query: 49  DWWAYGVLLYEMLVGQPPFDGEDEEEL 75
           D +  G  L  + +  P  +G   + L
Sbjct: 258 DIYTVGRTLAALTLDLPTRNGRYVDGL 284

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 38.7 bits (91), Expect = 5e-05
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDE-EELF 76
           YG  VD WA G +  E+L G P + G+ + ++L+
Sbjct: 180 YGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLY 213

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 38.7 bits (91), Expect = 5e-05
 Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 1/34 (2%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDE-EELF 76
           YGK+VD WA G L+ EM +G+P F G+ + ++L+
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLY 235

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 38.5 bits (90), Expect = 6e-05
 Identities = 10/52 (19%), Positives = 21/52 (40%), Gaps = 4/52 (7%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPKM 89
            I    Y   VD ++ G++L+E+L   P     +       + +    +P +
Sbjct: 201 QIHGNSYSHKVDIFSLGLILFELLY--PFSTQMERVRTLTDVRNL--KFPPL 248

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 38.3 bits (89), Expect = 1e-04
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED 71
           +IL   Y ++VD W+ G ++ EM+  +  F G D
Sbjct: 234 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 267

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 38.0 bits (89), Expect = 1e-04
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 49  DWWAYGVLLYEMLVGQPPFDGE 70
           D +A   +LYE L G PP+ G+
Sbjct: 217 DIYALTCVLYECLTGSPPYQGD 238

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 38.1 bits (89), Expect = 1e-04
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED 71
           +IL   Y ++VD W+ G ++ EM+ G   F G D
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 230

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 37.2 bits (87), Expect = 2e-04
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDE-EELF 76
           Y   +D W  G + YEM  G+P F G    E+L 
Sbjct: 178 YSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLH 211

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 37.2 bits (87), Expect = 2e-04
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDE-EELF 76
           Y  S+D W+ G +L EM+ G+P F G ++ E+L 
Sbjct: 186 YSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLK 219

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDE-EELF 76
           Y  ++D W+ G +  EM+ G P F G  E ++L 
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM 211

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE 74
           Y  +VD W+ G +  EM+  +  F G+ E +
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 36.9 bits (86), Expect = 3e-04
 Identities = 7/32 (21%), Positives = 17/32 (53%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG 69
           +I  + Y + VD +++G++L E++        
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCEIIGRVNADPD 224

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 36.8 bits (86), Expect = 3e-04
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDE-EELF 76
           Y  SVD W+ G +  EM+ G+P F G  + ++L 
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLP 230

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 36.8 bits (86), Expect = 3e-04
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE 74
           YG  VD WA G +L E+L+  P   G+ + +
Sbjct: 190 YGVGVDMWAVGCILAELLLRVPFLPGDSDLD 220

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 36.5 bits (85), Expect = 4e-04
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE 74
           Y  SVD W+   +  EML+  P F G+ E +
Sbjct: 215 YSTSVDIWSIACIWAEMLMKTPLFPGDSEID 245

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 36.6 bits (85), Expect = 4e-04
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDE 72
           Y  S+D W+ G +L E+L+GQP F G+  
Sbjct: 234 YTSSIDVWSAGCVLAELLLGQPIFPGDSG 262

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 36.5 bits (85), Expect = 4e-04
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 38  IIL-YQPYGKSVDWWAYGVLLYEMLVGQPPFDGED 71
           ++L    Y K++D WA G +  EML G+  F G  
Sbjct: 195 LLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH 229

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 36.3 bits (84), Expect = 4e-04
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDE 72
           Y K++D WA G +  E+L  +P F    E
Sbjct: 213 YTKAIDIWAIGCIFAELLTSEPIFHCRQE 241

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 36.5 bits (85), Expect = 4e-04
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 38  IIL-YQPYGKSVDWWAYGVLLYEMLVGQPPFDGED 71
           +IL +  Y ++VD W+ G ++ EM+ G+  F G D
Sbjct: 196 VILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD 230

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 36.5 bits (85), Expect = 4e-04
 Identities = 9/35 (25%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 38  IIL-YQPYGKSVDWWAYGVLLYEMLVGQPPFDGED 71
           +++ ++ + K VD W+ G ++ EM   +  F G  
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST 238

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 36.5 bits (85), Expect = 4e-04
 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 38  IIL-YQPYGKSVDWWAYGVLLYEMLVGQPPFDGED 71
           ++L    Y +++D W+ G +L E+ + +P F G D
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD 227

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 36.2 bits (84), Expect = 5e-04
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDE 72
           Y  ++D W+ G ++ E++ GQP F GE  
Sbjct: 219 YTTNIDIWSTGCVMAELMQGQPLFPGESG 247

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 36.1 bits (84), Expect = 5e-04
 Identities = 4/31 (12%), Positives = 10/31 (32%)

Query: 42  QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE 72
             +    D +A  + +      +P     D+
Sbjct: 206 YTHLPKADIFALALTVVCAAGAEPLPRNGDQ 236

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 36.2 bits (84), Expect = 6e-04
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 38  IIL-YQPYGKSVDWWAYGVLLYEMLVGQPPFDGED 71
           I+L +  Y ++VD W+ G ++ E+L G+  F G D
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 234

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 36.1 bits (84), Expect = 6e-04
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)

Query: 38  IIL-YQPYGKSVDWWAYGVLLYEMLVGQPPFDGED 71
           +IL +  Y ++VD W+ G ++ EML G+  F G+D
Sbjct: 194 VILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 228

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 36.1 bits (84), Expect = 6e-04
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 38  IIL-YQPYGKSVDWWAYGVLLYEMLVGQPPFDGED 71
           I+L  + Y KS+D W+ G +L EML  +P F G+ 
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 35.8 bits (83), Expect = 6e-04
 Identities = 10/41 (24%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 42  QPYGKSVDWWAYGVLLYEMLVGQPPF-DGEDEEELFAAITD 81
           + Y +SVD +A+G+ + EM   + P+ + ++  +++  +T 
Sbjct: 204 EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS 244

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 35.7 bits (83), Expect = 7e-04
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 38  IIL-YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE 72
           +I   Q Y  +VD W+ G +  EM++G+P F G++ 
Sbjct: 202 LIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS 237

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 35.4 bits (82), Expect = 9e-04
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 38  IIL-YQPYGKSVDWWAYGVLLYEMLVGQPPFDGED 71
           I+L    Y K +D W+ G +L E+L G+P F G  
Sbjct: 201 ILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 35.5 bits (82), Expect = 9e-04
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDE 72
           Y  S+D W+ G +  E+++G+P F GE  
Sbjct: 219 YTPSIDLWSIGCVFGELILGKPLFSGETS 247

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	92
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.92
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.91
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.89
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.88
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.87
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.86
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.84
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.83
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.82
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.81
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.81
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.8
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.8
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.8
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.8
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.79
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.79
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.78
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.78
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.78
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.77
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.77
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.76
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.75
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.74
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.74
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.73
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.72
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.72
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.71
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.71
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.71
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.71
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.71
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.7
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.69
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.69
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.69
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.68
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.68
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.68
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.67
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.66
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.66
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.66
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.65
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.65
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.65
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.64
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.64
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.64
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.63
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.63
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.62
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.62
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.62
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.61
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.61
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.61
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.61
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.61
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.61
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.61
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.6
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.6
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.6
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.6
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.6
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.6
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.6
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.59
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.59
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.59
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.59
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.59
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.59
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.59
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.58
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.58
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.57
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.57
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.57
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.57
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.57
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.57
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.56
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.56
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.56
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.56
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.55
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.54
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.54
3bhy_A	283	Death-associated protein kinase 3; death associate	99.54
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.53
3niz_A	311	Rhodanese family protein; structural genomics, str	99.53
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.53
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.53
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.53
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.53
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.53
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.52
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.52
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.52
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.52
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.52
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.52
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.51
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.51
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.51
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.51
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.51
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.51
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.5
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.5
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.5
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.49
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.49
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.49
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.49
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.49
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.48
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.48
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.48
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.48
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.48
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.48
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.48
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.47
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.47
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.47
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.47
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.47
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.47
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.47
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.47
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.47
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.46
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.46
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.46
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.46
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.46
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.46
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.46
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.45
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.45
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.45
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.45
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.45
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.45
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.45
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.45
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.45
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.45
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.45
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.44
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.44
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.44
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.44
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.44
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.44
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.44
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.43
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.43
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.43
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.43
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.43
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.43
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.43
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.42
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.42
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.42
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.42
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.42
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.42
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.41
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.41
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.41
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.41
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.41
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.4
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.4
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.4
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.4
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.4
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.4
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.39
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.39
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.39
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.39
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.38
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.38
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.38
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.38
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.38
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.38
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.38
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.38
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.38
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.37
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.37
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.37
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.37
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.37
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.37
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.37
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.36
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.36
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.36
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.35
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.35
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.34
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.34
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.34
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.34
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.33
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.33
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.33
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.32
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.32
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.32
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.32
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.32
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.31
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.31
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.3
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.3
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.29
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.29
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.28
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.28
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.27
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.26
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.26
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.26
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.26
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.24
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.24
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.23
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.22
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.19
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.18
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.17
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.14
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.13
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.09
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.03
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	98.99
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.75
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	98.41
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.36
3uqc_A	286	Probable conserved transmembrane protein; structur	97.78
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	97.48

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.92  E-value=8.7e-25  Score=127.10  Aligned_cols=91  Identities=21%  Similarity=0.414  Sum_probs=82.2

Q ss_pred             CCCCCccccCCCccccccCCC---CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPG---RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFA   77 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~---~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~   77 (92)
                      +++++.+||+|||++..+...   ....++|||+.|||||++.+..|+.++|+||+|+++|+|++|..||.+.+..+++.
T Consensus       165 l~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~  244 (311)
T 4aw0_A          165 LNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFA  244 (311)
T ss_dssp             ECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             EcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            467889999999999877533   34667899999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCcCCCCCC
Q psy8825          78 AITDHSVSYPKMAV   91 (92)
Q Consensus        78 ~i~~~~~~~p~~~~   91 (92)
                      +|.+..+.+|..++
T Consensus       245 ~i~~~~~~~p~~~s  258 (311)
T 4aw0_A          245 KIIKLEYDFPEKFF  258 (311)
T ss_dssp             HHHHTCCCCCTTCC
T ss_pred             HHHcCCCCCCcccC
Confidence            99999999998876

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.91  E-value=2.1e-24  Score=125.21  Aligned_cols=92  Identities=21%  Similarity=0.429  Sum_probs=80.6

Q ss_pred             CCCCCccccCCCccccccCC-CCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRP-GRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +++++.+||+|||.++.... .....+.+||+.|||||++.+..|+.++|+||+|+++|+|++|..||.+.+..+++.+|
T Consensus       159 l~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i  238 (304)
T 3ubd_A          159 LDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI  238 (304)
T ss_dssp             ECTTSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             EcCCCCEEecccccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence            36788999999999976644 34566789999999999999999999999999999999999999999999999999999


Q ss_pred             HhCCCcCCCCCCC
Q psy8825          80 TDHSVSYPKMAVF   92 (92)
Q Consensus        80 ~~~~~~~p~~~~~   92 (92)
                      .+..+.+|..+++
T Consensus       239 ~~~~~~~p~~~s~  251 (304)
T 3ubd_A          239 LKAKLGMPQFLSP  251 (304)
T ss_dssp             HHCCCCCCTTSCH
T ss_pred             HcCCCCCCCcCCH
Confidence            9999999988763

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.89  E-value=1.8e-23  Score=119.99  Aligned_cols=91  Identities=25%  Similarity=0.387  Sum_probs=70.0

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +++++.+||+|||.+..........+.+||+.|+|||++.+..+ +.++|+||+|+++++|++|..||.+.+..+.+..|
T Consensus       145 l~~~~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i  224 (275)
T 3hyh_A          145 LDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI  224 (275)
T ss_dssp             ECTTCCEEECCSSCC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             ECCCCCEEEeecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            35788999999999987766666778899999999999988876 57899999999999999999999999999999999


Q ss_pred             HhCCCcCCCCCC
Q psy8825          80 TDHSVSYPKMAV   91 (92)
Q Consensus        80 ~~~~~~~p~~~~   91 (92)
                      ..+.+++|..++
T Consensus       225 ~~~~~~~p~~~s  236 (275)
T 3hyh_A          225 SNGVYTLPKFLS  236 (275)
T ss_dssp             HHTCCCCCTTSC
T ss_pred             HcCCCCCCCCCC
Confidence            999999998876

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.88  E-value=3.1e-22  Score=117.86  Aligned_cols=84  Identities=19%  Similarity=0.347  Sum_probs=74.6

Q ss_pred             CCCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +++++.+||+|||++..+... ....+.+||+.|||||++.+..|+.++|+||+|+++|+|++|..||.+.+..+++..|
T Consensus       203 l~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i  282 (346)
T 4fih_A          203 LTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI  282 (346)
T ss_dssp             ECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred             ECCCCCEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH
Confidence            467889999999999877544 4567889999999999999889999999999999999999999999999999999888


Q ss_pred             HhCCC
Q psy8825          80 TDHSV   84 (92)
Q Consensus        80 ~~~~~   84 (92)
                      .....
T Consensus       283 ~~~~~  287 (346)
T 4fih_A          283 RDNLP  287 (346)
T ss_dssp             HHSSC
T ss_pred             HcCCC
Confidence            87643

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.87  E-value=7.8e-22  Score=118.60  Aligned_cols=84  Identities=19%  Similarity=0.347  Sum_probs=74.7

Q ss_pred             CCCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      |++++.+||+|||++..+... ....+.+||+.|||||++.+..|+.++|+||+|+++|+|++|..||.+.+..+++..|
T Consensus       280 l~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i  359 (423)
T 4fie_A          280 LTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI  359 (423)
T ss_dssp             ECTTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred             EcCCCCEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH
Confidence            467899999999999877544 4567889999999999999899999999999999999999999999999999999888


Q ss_pred             HhCCC
Q psy8825          80 TDHSV   84 (92)
Q Consensus        80 ~~~~~   84 (92)
                      .....
T Consensus       360 ~~~~~  364 (423)
T 4fie_A          360 RDNLP  364 (423)
T ss_dssp             HHSCC
T ss_pred             HcCCC
Confidence            87643

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.86  E-value=6.2e-23  Score=120.93  Aligned_cols=91  Identities=16%  Similarity=0.198  Sum_probs=77.3

Q ss_pred             CCCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +++++.+||+|||+++.+.... ...+.+||+.|||||++.+..|+.+.|+||+|+++|+|++|..||.+.+..+++.+|
T Consensus       158 l~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i  237 (350)
T 4b9d_A          158 LTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI  237 (350)
T ss_dssp             ECTTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             ECCCCCEEEcccccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH
Confidence            4678899999999998765432 334568999999999999999999999999999999999999999999999999999


Q ss_pred             HhCCC-cCCCCCC
Q psy8825          80 TDHSV-SYPKMAV   91 (92)
Q Consensus        80 ~~~~~-~~p~~~~   91 (92)
                      .++.+ ++|..++
T Consensus       238 ~~~~~~~~~~~~s  250 (350)
T 4b9d_A          238 ISGSFPPVSLHYS  250 (350)
T ss_dssp             HHTCCCCCCTTSC
T ss_pred             HcCCCCCCCccCC
Confidence            98875 4454443

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.84  E-value=1.3e-21  Score=114.80  Aligned_cols=90  Identities=16%  Similarity=0.240  Sum_probs=71.3

Q ss_pred             CCCC-ccccCCCccccccCCCC------CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH
Q psy8825           2 GESQ-PFRERTLSHQDKIRPGR------GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE   74 (92)
Q Consensus         2 ~~~~-~~~l~d~~~~~~~~~~~------~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~   74 (92)
                      +.++ .+||+|||+++.+....      ...+++||+.|||||++.+..|+.+.|+||+|+++|+|++|..||.+.+..+
T Consensus       184 ~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~  263 (336)
T 4g3f_A          184 SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP  263 (336)
T ss_dssp             CTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC
T ss_pred             eCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH
Confidence            5566 59999999998765432      2345689999999999999999999999999999999999999999887777


Q ss_pred             HHHHHHhCCCc---CCCCCC
Q psy8825          75 LFAAITDHSVS---YPKMAV   91 (92)
Q Consensus        75 ~~~~i~~~~~~---~p~~~~   91 (92)
                      ++.+|....++   +|..++
T Consensus       264 ~~~~i~~~~~~~~~~~~~~s  283 (336)
T 4g3f_A          264 LCLKIASEPPPIREIPPSCA  283 (336)
T ss_dssp             CHHHHHHSCCGGGGSCTTSC
T ss_pred             HHHHHHcCCCCchhcCccCC
Confidence            78888887654   444443

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.83  E-value=1.3e-20  Score=118.34  Aligned_cols=91  Identities=19%  Similarity=0.341  Sum_probs=76.9

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhc-cCCCCchhhHHhHHHHHHHHHhCCCCCCCC---CHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIIL-YQPYGKSVDWWAYGVLLYEMLVGQPPFDGE---DEEELF   76 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~-~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~---~~~~~~   76 (92)
                      |++++.+||+|||++..+.. ....+.|||+.|||||++. +..|+.++|+||+|+++|+|++|..||.+.   +...+.
T Consensus       325 ld~~G~vKL~DFGlA~~~~~-~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~  403 (689)
T 3v5w_A          325 LDEHGHVRISDLGLACDFSK-KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID  403 (689)
T ss_dssp             ECTTSCEEECCCTTCEECSS-CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHH
T ss_pred             EeCCCCEEecccceeeecCC-CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            46789999999999977644 3456789999999999986 457899999999999999999999999763   456778


Q ss_pred             HHHHhCCCcCCCCCCC
Q psy8825          77 AAITDHSVSYPKMAVF   92 (92)
Q Consensus        77 ~~i~~~~~~~p~~~~~   92 (92)
                      ..+....+.+|..+++
T Consensus       404 ~~i~~~~~~~p~~~S~  419 (689)
T 3v5w_A          404 RMTLTMAVELPDSFSP  419 (689)
T ss_dssp             HHHHHCCCCCCTTSCH
T ss_pred             HhhcCCCCCCCccCCH
Confidence            8888899999988763

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.82  E-value=2.2e-20  Score=115.85  Aligned_cols=85  Identities=20%  Similarity=0.377  Sum_probs=77.9

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHS   83 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~   83 (92)
                      .+.+||.|||+++.+.......+.+||+.|+|||++.+..|+...|+||+|+++++|++|..||.+.+..+++.+|....
T Consensus       293 ~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~  372 (573)
T 3uto_A          293 SNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCD  372 (573)
T ss_dssp             CCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTC
T ss_pred             CCCEEEeeccceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCC
Confidence            47899999999998877777777899999999999999999999999999999999999999999999999999999988


Q ss_pred             CcCCC
Q psy8825          84 VSYPK   88 (92)
Q Consensus        84 ~~~p~   88 (92)
                      +.+|.
T Consensus       373 ~~~~~  377 (573)
T 3uto_A          373 WNMDD  377 (573)
T ss_dssp             CCCCS
T ss_pred             CCCCc
Confidence            77664

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.81  E-value=6.1e-20  Score=106.81  Aligned_cols=91  Identities=16%  Similarity=0.344  Sum_probs=75.7

Q ss_pred             CCCCCccccCCCccccccCCC---CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPG---RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELF   76 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~---~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~   76 (92)
                      +++++.+|++|||+++.....   ....+.+||+.|||||++.+..|+.+.|+||+|+++||+++ |..||.+.+..+++
T Consensus       178 l~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~  257 (308)
T 4gt4_A          178 VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVV  257 (308)
T ss_dssp             ECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHH
T ss_pred             ECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            356788999999998766433   23445689999999999999999999999999999999998 89999999999999


Q ss_pred             HHHHhCC-CcCCCCCC
Q psy8825          77 AAITDHS-VSYPKMAV   91 (92)
Q Consensus        77 ~~i~~~~-~~~p~~~~   91 (92)
                      ..|..+. .+.|..++
T Consensus       258 ~~i~~~~~~~~p~~~~  273 (308)
T 4gt4_A          258 EMIRNRQVLPCPDDCP  273 (308)
T ss_dssp             HHHHTTCCCCCCTTCC
T ss_pred             HHHHcCCCCCCcccch
Confidence            8888765 45566554

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.81  E-value=6e-20  Score=107.64  Aligned_cols=91  Identities=19%  Similarity=0.357  Sum_probs=69.1

Q ss_pred             CCCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELF   76 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~   76 (92)
                      ++++..+||+|||+++......   .....+||+.|||||++.+..|+.+.|+||+|+++||+++ |..||.+.+..+++
T Consensus       191 l~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~  270 (329)
T 4aoj_A          191 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI  270 (329)
T ss_dssp             EETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHH
T ss_pred             ECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHH
Confidence            3567889999999998764432   2345689999999999999999999999999999999998 89999999999998


Q ss_pred             HHHHhCC-CcCCCCCC
Q psy8825          77 AAITDHS-VSYPKMAV   91 (92)
Q Consensus        77 ~~i~~~~-~~~p~~~~   91 (92)
                      ..|.++. ++.|..++
T Consensus       271 ~~i~~g~~~~~p~~~~  286 (329)
T 4aoj_A          271 DCITQGRELERPRACP  286 (329)
T ss_dssp             HHHHHTCCCCCCTTCC
T ss_pred             HHHHcCCCCCCccccc
Confidence            8888864 66676664

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.80  E-value=1.6e-19  Score=104.29  Aligned_cols=79  Identities=14%  Similarity=0.212  Sum_probs=63.7

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCC-HHHHHHHHHh
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED-EEELFAAITD   81 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~-~~~~~~~i~~   81 (92)
                      +++.+||+|||++... ......+.+||+.|||||++.+ .|+.+.|+||+|+++|+|++|..||.+.. ...+...+..
T Consensus       167 ~~g~vKl~DFGla~~~-~~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~  244 (290)
T 3fpq_A          167 PTGSVKIGDLGLATLK-RASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS  244 (290)
T ss_dssp             TTSCEEECCTTGGGGC-CTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT
T ss_pred             CCCCEEEEeCcCCEeC-CCCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHc
Confidence            4688999999999653 3445567899999999999864 69999999999999999999999998754 4555555655


Q ss_pred             CC
Q psy8825          82 HS   83 (92)
Q Consensus        82 ~~   83 (92)
                      +.
T Consensus       245 ~~  246 (290)
T 3fpq_A          245 GV  246 (290)
T ss_dssp             TC
T ss_pred             CC
Confidence            43

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.80  E-value=2.8e-20  Score=107.87  Aligned_cols=91  Identities=18%  Similarity=0.353  Sum_probs=76.0

Q ss_pred             CCCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELF   76 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~   76 (92)
                      ++++..+|++|||+++......   .....+||+.|||||++.+..|+.+.|+||+|+++||+++ |..||.+.+..+++
T Consensus       161 l~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~  240 (299)
T 4asz_A          161 VGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI  240 (299)
T ss_dssp             ECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH
T ss_pred             ECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence            3567889999999997664432   2334579999999999999999999999999999999998 89999999999999


Q ss_pred             HHHHhCC-CcCCCCCC
Q psy8825          77 AAITDHS-VSYPKMAV   91 (92)
Q Consensus        77 ~~i~~~~-~~~p~~~~   91 (92)
                      ..|.++. ++.|..++
T Consensus       241 ~~i~~~~~~~~p~~~~  256 (299)
T 4asz_A          241 ECITQGRVLQRPRTCP  256 (299)
T ss_dssp             HHHHHTCCCCCCTTCC
T ss_pred             HHHHcCCCCCCCccch
Confidence            9998875 46676654

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.80  E-value=1.5e-19  Score=108.21  Aligned_cols=84  Identities=14%  Similarity=0.162  Sum_probs=70.0

Q ss_pred             CCCCccccCCCccccccCCC-----CCCCCCCcCCcCccchhhccCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-----RGSNPRPSAYSILLFQIILYQP-YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-----~~~~~~~g~~~~~~pe~~~~~~-~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      +.++.+|++|||+++.+...     ....+.+||+.|+|||++.+.. ++.+.|+||+|+++++|++|..||.+.+..++
T Consensus       192 ~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~  271 (398)
T 4b99_A          192 NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ  271 (398)
T ss_dssp             CTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHH
T ss_pred             CCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHH
Confidence            56789999999999776432     3455679999999999987754 58999999999999999999999999999999


Q ss_pred             HHHHHhCCCc
Q psy8825          76 FAAITDHSVS   85 (92)
Q Consensus        76 ~~~i~~~~~~   85 (92)
                      +.+|....+.
T Consensus       272 l~~I~~~~g~  281 (398)
T 4b99_A          272 LQLIMMVLGT  281 (398)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHhcCC
Confidence            9888775443

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.80  E-value=1.1e-19  Score=105.63  Aligned_cols=83  Identities=13%  Similarity=0.295  Sum_probs=61.2

Q ss_pred             CCCCCccccCCCccccccCCC---CCCCCCCcCCcCccchhhcc---CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPG---RGSNPRPSAYSILLFQIILY---QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE   74 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~---~~~~~~~g~~~~~~pe~~~~---~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~   74 (92)
                      |++++.+||+|||+++.....   ....+.+||+.|||||++.+   ..|+.+.|+||+|+++||+++|..||.+.+...
T Consensus       165 l~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~  244 (307)
T 3omv_A          165 LHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD  244 (307)
T ss_dssp             EETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH
T ss_pred             ECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH
Confidence            356788999999999765432   33456799999999999864   358899999999999999999999999876555


Q ss_pred             HHHHHHhCC
Q psy8825          75 LFAAITDHS   83 (92)
Q Consensus        75 ~~~~i~~~~   83 (92)
                      .+..+....
T Consensus       245 ~~~~~~~~~  253 (307)
T 3omv_A          245 QIIFMVGRG  253 (307)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHhcC
Confidence            554444443

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.79  E-value=8e-19  Score=103.62  Aligned_cols=90  Identities=44%  Similarity=0.789  Sum_probs=79.7

Q ss_pred             CCCCccccCCCccccccC-CCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIR-PGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~-~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||+|||.+.... ......+.+||+.|+|||++.+..++.+.|+|++|++++++++|..||.+.+..+++.+|.
T Consensus       155 ~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~  234 (353)
T 2i0e_A          155 DSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM  234 (353)
T ss_dssp             CTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             cCCCcEEEEeCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence            567899999999987643 3345667899999999999988889999999999999999999999999999999999999


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      ...+.+|..++
T Consensus       235 ~~~~~~p~~~s  245 (353)
T 2i0e_A          235 EHNVAYPKSMS  245 (353)
T ss_dssp             HCCCCCCTTSC
T ss_pred             hCCCCCCCCCC
Confidence            99999888765

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.79  E-value=8.6e-19  Score=110.40  Aligned_cols=91  Identities=44%  Similarity=0.791  Sum_probs=81.2

Q ss_pred             CCCCCccccCCCccccccC-CCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIR-PGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~-~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      ++.++.+||+|||++.... ......+.+||+.|+|||++.+..++.+.|+|++|+++++|++|..||.+.+..+++.+|
T Consensus       475 l~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i  554 (674)
T 3pfq_A          475 LDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI  554 (674)
T ss_dssp             ECSSSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             EcCCCcEEEeecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence            3678899999999987643 345567789999999999999889999999999999999999999999999999999999


Q ss_pred             HhCCCcCCCCCC
Q psy8825          80 TDHSVSYPKMAV   91 (92)
Q Consensus        80 ~~~~~~~p~~~~   91 (92)
                      .+..+.+|..++
T Consensus       555 ~~~~~~~p~~~s  566 (674)
T 3pfq_A          555 MEHNVAYPKSMS  566 (674)
T ss_dssp             HSSCCCCCTTSC
T ss_pred             HhCCCCCCccCC
Confidence            999999998765

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.78  E-value=1.4e-18  Score=102.08  Aligned_cols=90  Identities=24%  Similarity=0.489  Sum_probs=79.1

Q ss_pred             CCCCccccCCCccccccC-CCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIR-PGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~-~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||+|||.+.... ......+.+||+.|+|||++.+..++.+.|+|++|++++++++|..||.+.+..+....|.
T Consensus       139 ~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~  218 (337)
T 1o6l_A          139 DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL  218 (337)
T ss_dssp             CTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             CCCCCEEEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence            567899999999987643 3445667899999999999988889999999999999999999999999999999999999


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      ...+.+|..++
T Consensus       219 ~~~~~~p~~~s  229 (337)
T 1o6l_A          219 MEEIRFPRTLS  229 (337)
T ss_dssp             HCCCCCCTTSC
T ss_pred             cCCCCCCCCCC
Confidence            99888887765

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.78  E-value=7.7e-20  Score=108.02  Aligned_cols=91  Identities=19%  Similarity=0.354  Sum_probs=71.4

Q ss_pred             CCCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCH-HHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDE-EEL   75 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~-~~~   75 (92)
                      +++++.+||+|||+++.+....   ...+.+||+.|||||++.+..|+.+.|+||+|+++||+++ |..||.+.+. ...
T Consensus       218 l~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~  297 (353)
T 4ase_A          218 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF  297 (353)
T ss_dssp             ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH
T ss_pred             eCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            3567899999999998765443   2345689999999999999999999999999999999998 8999998654 344


Q ss_pred             HHHHHhC-CCcCCCCCC
Q psy8825          76 FAAITDH-SVSYPKMAV   91 (92)
Q Consensus        76 ~~~i~~~-~~~~p~~~~   91 (92)
                      ...+.++ .++.|..++
T Consensus       298 ~~~i~~g~~~~~p~~~~  314 (353)
T 4ase_A          298 CRRLKEGTRMRAPDYTT  314 (353)
T ss_dssp             HHHHHHTCCCCCCTTCC
T ss_pred             HHHHHcCCCCCCCccCC
Confidence            4555554 356676654

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.78  E-value=2.4e-18  Score=102.20  Aligned_cols=90  Identities=22%  Similarity=0.440  Sum_probs=79.1

Q ss_pred             CCCCccccCCCcccccc-CCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKI-RPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~-~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||+|||.+... .......+.+||+.|++||++.+..++.+.|+|++|++++++++|..||.+.+..+.+.+|.
T Consensus       173 ~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~  252 (373)
T 2r5t_A          173 DSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL  252 (373)
T ss_dssp             CTTSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHH
T ss_pred             CCCCCEEEeeCccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence            56789999999998764 33455667899999999999998889999999999999999999999999999999999999


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      .....+|..++
T Consensus       253 ~~~~~~~~~~~  263 (373)
T 2r5t_A          253 NKPLQLKPNIT  263 (373)
T ss_dssp             HSCCCCCSSSC
T ss_pred             hcccCCCCCCC
Confidence            98888887664

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.77  E-value=6e-19  Score=104.12  Aligned_cols=90  Identities=32%  Similarity=0.545  Sum_probs=74.3

Q ss_pred             CCCCccccCCCccccccCC-CCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRP-GRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||+|||.+..... .....+.+||+.|+|||++.+..++.+.|+|++|++++++++|..||.+.+..+.+.+|.
T Consensus       158 ~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~  237 (353)
T 3txo_A          158 DHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL  237 (353)
T ss_dssp             CTTSCEEECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             CCCCCEEEccccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            5778999999999876433 345667899999999999988888999999999999999999999999999999999999


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      ...+.+|..++
T Consensus       238 ~~~~~~p~~~~  248 (353)
T 3txo_A          238 NDEVVYPTWLH  248 (353)
T ss_dssp             HCCCCCCTTSC
T ss_pred             cCCCCCCCCCC
Confidence            99999888764

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.77  E-value=3.8e-18  Score=100.47  Aligned_cols=90  Identities=36%  Similarity=0.605  Sum_probs=79.2

Q ss_pred             CCCCccccCCCccccccCC-CCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRP-GRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||+|||.+..... .....+.+||+.|+|||++.+..++.+.|+|++|++++++++|..||.+.+..+.+.+|.
T Consensus       152 ~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~  231 (345)
T 1xjd_A          152 DKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR  231 (345)
T ss_dssp             CTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             CCCCCEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence            5678999999999876533 345667899999999999988889999999999999999999999999999999999999


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      ...+.+|..++
T Consensus       232 ~~~~~~p~~~s  242 (345)
T 1xjd_A          232 MDNPFYPRWLE  242 (345)
T ss_dssp             HCCCCCCTTSC
T ss_pred             hCCCCCCcccC
Confidence            99888887765

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.76  E-value=3.5e-18  Score=99.97  Aligned_cols=90  Identities=21%  Similarity=0.359  Sum_probs=80.4

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+|+.|||.+............+||+.|+|||.+.+..+ +.+.|+|++|++++++++|..||.+.+..+...++.
T Consensus       148 ~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  227 (328)
T 3fe3_A          148 DADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL  227 (328)
T ss_dssp             CTTSCEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             cCCCCEEEeeccCceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            5678899999999987777666778899999999999988776 478999999999999999999999999999999999


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      .+.+.+|..++
T Consensus       228 ~~~~~~p~~~s  238 (328)
T 3fe3_A          228 RGKYRIPFYMS  238 (328)
T ss_dssp             HCCCCCCTTSC
T ss_pred             hCCCCCCCCCC
Confidence            99999887765

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.75  E-value=8.6e-18  Score=100.56  Aligned_cols=91  Identities=29%  Similarity=0.530  Sum_probs=75.9

Q ss_pred             CCCCCccccCCCcccccc-CCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC---------
Q psy8825           1 MGESQPFRERTLSHQDKI-RPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE---------   70 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~-~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~---------   70 (92)
                      ++.++.+||+|||.+... .......+.+||+.|+|||++.+..++.+.|+|++|++++++++|..||.+.         
T Consensus       186 l~~~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~  265 (396)
T 4dc2_A          186 LDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN  265 (396)
T ss_dssp             ECTTSCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------C
T ss_pred             ECCCCCEEEeecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchh
Confidence            357889999999998763 3445677789999999999999888999999999999999999999999642         


Q ss_pred             CHHHHHHHHHhCCCcCCCCCC
Q psy8825          71 DEEELFAAITDHSVSYPKMAV   91 (92)
Q Consensus        71 ~~~~~~~~i~~~~~~~p~~~~   91 (92)
                      ........|....+.+|..++
T Consensus       266 ~~~~~~~~i~~~~~~~p~~~s  286 (396)
T 4dc2_A          266 TEDYLFQVILEKQIRIPRSLS  286 (396)
T ss_dssp             CHHHHHHHHHHCCCCCCTTSC
T ss_pred             hHHHHHHHHhccccCCCCcCC
Confidence            234567788888888888765

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.74  E-value=1.4e-17  Score=97.15  Aligned_cols=88  Identities=20%  Similarity=0.502  Sum_probs=77.3

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+||.|||.+.....  ...+.+||+.|++||++.+..++.+.|+|++|++++++++|..||.+.+..+.+.+|..
T Consensus       140 ~~~g~~kL~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  217 (318)
T 1fot_A          140 DKNGHIKITDFGFAKYVPD--VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN  217 (318)
T ss_dssp             CTTSCEEECCCSSCEECSS--CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH
T ss_pred             cCCCCEEEeecCcceecCC--ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            5678999999999876432  34567899999999999888899999999999999999999999999999999999999


Q ss_pred             CCCcCCCCCC
Q psy8825          82 HSVSYPKMAV   91 (92)
Q Consensus        82 ~~~~~p~~~~   91 (92)
                      ..+.+|..++
T Consensus       218 ~~~~~p~~~~  227 (318)
T 1fot_A          218 AELRFPPFFN  227 (318)
T ss_dssp             CCCCCCTTSC
T ss_pred             CCCCCCCCCC
Confidence            9888887664

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.74  E-value=1.1e-17  Score=101.07  Aligned_cols=90  Identities=24%  Similarity=0.484  Sum_probs=77.1

Q ss_pred             CCCCccccCCCccccccCC-CCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRP-GRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+..... .....+.+||+.|+|||++.+..++.+.|+|++|++++++++|..||.+.+..+....+.
T Consensus       283 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~  362 (446)
T 4ejn_A          283 DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL  362 (446)
T ss_dssp             CSSSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             CCCCCEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHH
Confidence            5678999999999876433 345567899999999999988889999999999999999999999999999999999999


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      ...+.+|..++
T Consensus       363 ~~~~~~p~~~~  373 (446)
T 4ejn_A          363 MEEIRFPRTLG  373 (446)
T ss_dssp             HCCCCCCTTSC
T ss_pred             hCCCCCCccCC
Confidence            99988887765

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.73  E-value=1.9e-17  Score=97.63  Aligned_cols=88  Identities=27%  Similarity=0.522  Sum_probs=77.7

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+||.|||.+.....  ...+.+||+.|++||++.+..++.+.|+|++|++++++++|..||.+.+..+.+.+|..
T Consensus       175 ~~~g~~kL~DFg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~  252 (350)
T 1rdq_E          175 DQQGYIQVTDFGFAKRVKG--RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS  252 (350)
T ss_dssp             CTTSCEEECCCTTCEECSS--CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCCCCEEEcccccceeccC--CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHc
Confidence            5678999999999876533  34567899999999999888899999999999999999999999999999999999999


Q ss_pred             CCCcCCCCCC
Q psy8825          82 HSVSYPKMAV   91 (92)
Q Consensus        82 ~~~~~p~~~~   91 (92)
                      +.+.+|..++
T Consensus       253 ~~~~~p~~~~  262 (350)
T 1rdq_E          253 GKVRFPSHFS  262 (350)
T ss_dssp             CCCCCCTTCC
T ss_pred             CCCCCCCCCC
Confidence            9998888765

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.72  E-value=9.8e-18  Score=99.34  Aligned_cols=77  Identities=17%  Similarity=0.310  Sum_probs=59.3

Q ss_pred             CccccCCCccccccCCC-----------------------------CCCCCCCcCCcCccchhhccC-CCCchhhHHhHH
Q psy8825           5 QPFRERTLSHQDKIRPG-----------------------------RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYG   54 (92)
Q Consensus         5 ~~~~l~d~~~~~~~~~~-----------------------------~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g   54 (92)
                      +.+||+|||.++.....                             ....+.+||+.|+|||++.+. .|+.+.|+||+|
T Consensus       155 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG  234 (361)
T 4f9c_A          155 KKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAG  234 (361)
T ss_dssp             TEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHH
T ss_pred             CeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhH
Confidence            68999999998654322                             123456899999999998765 478999999999


Q ss_pred             HHHHHHHhCCCCCC-CCCHHHHHHHHHh
Q psy8825          55 VLLYEMLVGQPPFD-GEDEEELFAAITD   81 (92)
Q Consensus        55 ~~~~~~~~g~~p~~-~~~~~~~~~~i~~   81 (92)
                      +++++|++|..||. +.+..+++.+|..
T Consensus       235 ~il~ell~G~~Pf~~~~~~~~~l~~I~~  262 (361)
T 4f9c_A          235 VIFLSLLSGRYPFYKASDDLTALAQIMT  262 (361)
T ss_dssp             HHHHHHHHTCSSSSCCSSHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCCCCCHHHHHHHHHH
Confidence            99999999999985 4566677666654

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.72  E-value=4.5e-17  Score=95.84  Aligned_cols=90  Identities=28%  Similarity=0.511  Sum_probs=74.3

Q ss_pred             CCCCccccCCCccccccC-CCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCC---------CC
Q psy8825           2 GESQPFRERTLSHQDKIR-PGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG---------ED   71 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~-~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~---------~~   71 (92)
                      +.++.+||+|||.+.... ......+.+||+.|++||++.+..++.+.|+|++|++++++++|..||..         ..
T Consensus       144 ~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~  223 (345)
T 3a8x_A          144 DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT  223 (345)
T ss_dssp             CTTSCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------C
T ss_pred             CCCCCEEEEeccccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccccccc
Confidence            567899999999987643 34456678999999999999888899999999999999999999999975         23


Q ss_pred             HHHHHHHHHhCCCcCCCCCC
Q psy8825          72 EEELFAAITDHSVSYPKMAV   91 (92)
Q Consensus        72 ~~~~~~~i~~~~~~~p~~~~   91 (92)
                      .......+....+.+|..++
T Consensus       224 ~~~~~~~i~~~~~~~p~~~s  243 (345)
T 3a8x_A          224 EDYLFQVILEKQIRIPRSLS  243 (345)
T ss_dssp             HHHHHHHHHHCCCCCCTTSC
T ss_pred             HHHHHHHHHcCCCCCCCCCC
Confidence            45567778888888887665

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.71  E-value=9.5e-17  Score=94.95  Aligned_cols=85  Identities=29%  Similarity=0.516  Sum_probs=74.8

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHS   83 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~   83 (92)
                      ++.+||.|||.+............+||+.|++||++.+..++.+.|+|++|++++++++|..||.+.+..+....+..+.
T Consensus       167 ~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~  246 (362)
T 2bdw_A          167 GAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA  246 (362)
T ss_dssp             TCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred             CCCEEEeecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC
Confidence            45699999999987766666667899999999999988889999999999999999999999999999888998998887


Q ss_pred             CcCCC
Q psy8825          84 VSYPK   88 (92)
Q Consensus        84 ~~~p~   88 (92)
                      +.+|.
T Consensus       247 ~~~~~  251 (362)
T 2bdw_A          247 YDYPS  251 (362)
T ss_dssp             CCCCT
T ss_pred             CCCCc
Confidence            76664

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.71  E-value=5.2e-17  Score=100.40  Aligned_cols=90  Identities=24%  Similarity=0.462  Sum_probs=76.3

Q ss_pred             CCCCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC----CHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE----DEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~----~~~~~~   76 (92)
                      +.++.+||.|||.+....... ...+.+||+.|++||++.+..++.+.|+|++|++++++++|..||.+.    ...+..
T Consensus       323 ~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~  402 (543)
T 3c4z_A          323 DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK  402 (543)
T ss_dssp             CTTSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHH
T ss_pred             eCCCCEEEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHH
Confidence            567899999999998765543 345569999999999999888999999999999999999999999875    456778


Q ss_pred             HHHHhCCCcCCCCCC
Q psy8825          77 AAITDHSVSYPKMAV   91 (92)
Q Consensus        77 ~~i~~~~~~~p~~~~   91 (92)
                      .++......+|..++
T Consensus       403 ~~i~~~~~~~p~~~s  417 (543)
T 3c4z_A          403 QRVLEQAVTYPDKFS  417 (543)
T ss_dssp             HHHHHCCCCCCTTSC
T ss_pred             HHHhhcccCCCcccC
Confidence            888888888887765

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.71  E-value=8.1e-17  Score=94.01  Aligned_cols=90  Identities=20%  Similarity=0.434  Sum_probs=73.3

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+...... ......+||+.|++||.+....++.+.|+|++|++++++++|..||.+.+..+.+.++.
T Consensus       155 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  234 (327)
T 3a62_A          155 NHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL  234 (327)
T ss_dssp             CTTSCEEECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             CCCCcEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence            56788999999998664332 34556789999999999988888999999999999999999999999999989999999


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      ...+.+|..++
T Consensus       235 ~~~~~~p~~~~  245 (327)
T 3a62_A          235 KCKLNLPPYLT  245 (327)
T ss_dssp             HTCCCCCTTSC
T ss_pred             hCCCCCCCCCC
Confidence            98888887654

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.71  E-value=8.5e-17  Score=95.23  Aligned_cols=82  Identities=26%  Similarity=0.441  Sum_probs=74.1

Q ss_pred             ccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCc
Q psy8825           6 PFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVS   85 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~~~   85 (92)
                      .+||.|||.+............+||+.|++||++.+..++.+.|+|++|++++++++|..||.+.+..+.+..|....+.
T Consensus       157 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~  236 (361)
T 2yab_A          157 HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD  236 (361)
T ss_dssp             CEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC
T ss_pred             CEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC
Confidence            79999999998877666667789999999999998888999999999999999999999999999999999999888776


Q ss_pred             CC
Q psy8825          86 YP   87 (92)
Q Consensus        86 ~p   87 (92)
                      ++
T Consensus       237 ~~  238 (361)
T 2yab_A          237 FD  238 (361)
T ss_dssp             CC
T ss_pred             CC
Confidence            65

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.70  E-value=6.4e-17  Score=98.37  Aligned_cols=81  Identities=16%  Similarity=0.207  Sum_probs=65.1

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+||.|||.+............+||+.|++||++.+..++.+.|+|++|++++++++|..||.+.+..+++.+|.+
T Consensus       198 ~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~  277 (464)
T 3ttj_A          198 KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE  277 (464)
T ss_dssp             CTTSCEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             eCCCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            56788999999999877666666678999999999999988899999999999999999999999999998888887766


Q ss_pred             C
Q psy8825          82 H   82 (92)
Q Consensus        82 ~   82 (92)
                      .
T Consensus       278 ~  278 (464)
T 3ttj_A          278 Q  278 (464)
T ss_dssp             H
T ss_pred             h
Confidence            3

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.69  E-value=2.3e-16  Score=94.09  Aligned_cols=90  Identities=19%  Similarity=0.357  Sum_probs=74.9

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc---CCCCchhhHHhHHHHHHHHHhCCCCCCC---CCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY---QPYGKSVDWWAYGVLLYEMLVGQPPFDG---EDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~---~~~~~~~~~ws~g~~~~~~~~g~~p~~~---~~~~~~   75 (92)
                      +.++.+||.|||.+..........+.+||+.|+|||++..   ..++.+.|+|++|++++++++|..||.+   ....+.
T Consensus       149 ~~~g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~  228 (384)
T 4fr4_A          149 DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEI  228 (384)
T ss_dssp             CTTSCEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHH
T ss_pred             CCCCCEEEeccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHH
Confidence            5678999999999988777777778899999999999864   3578899999999999999999999974   345666


Q ss_pred             HHHHHhCCCcCCCCCC
Q psy8825          76 FAAITDHSVSYPKMAV   91 (92)
Q Consensus        76 ~~~i~~~~~~~p~~~~   91 (92)
                      ...+......+|..++
T Consensus       229 ~~~~~~~~~~~p~~~s  244 (384)
T 4fr4_A          229 VHTFETTVVTYPSAWS  244 (384)
T ss_dssp             HHHHHHCCCCCCTTSC
T ss_pred             HHHHhhcccCCCCcCC
Confidence            7777777787777654

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.69  E-value=3.6e-17  Score=94.86  Aligned_cols=78  Identities=14%  Similarity=0.253  Sum_probs=52.8

Q ss_pred             CCCCCccccCCCccccccCCCC-------------CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCC
Q psy8825           1 MGESQPFRERTLSHQDKIRPGR-------------GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPF   67 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~-------------~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~   67 (92)
                      +++++.+||+|||+++.+....             ...+.+||+.|||||++.+..|+.+.|+||+|+++++|+.   ||
T Consensus       151 l~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf  227 (299)
T 4g31_A          151 FTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PF  227 (299)
T ss_dssp             ECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CC
T ss_pred             ECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CC
Confidence            3578899999999998765432             2234689999999999999999999999999999999985   67


Q ss_pred             CCCCH-HHHHHHHHh
Q psy8825          68 DGEDE-EELFAAITD   81 (92)
Q Consensus        68 ~~~~~-~~~~~~i~~   81 (92)
                      .+... ...+..+..
T Consensus       228 ~~~~~~~~~~~~~~~  242 (299)
T 4g31_A          228 STQMERVRTLTDVRN  242 (299)
T ss_dssp             SSHHHHHHHHHHHHT
T ss_pred             CCccHHHHHHHHHhc
Confidence            65322 233444443

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.69  E-value=1.3e-16  Score=97.37  Aligned_cols=90  Identities=23%  Similarity=0.356  Sum_probs=78.5

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+..........+.+||+.|+|||++.+..+ +.+.|+|++|++++++++|..||.+.+......+|.
T Consensus       150 ~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~  229 (476)
T 2y94_A          150 DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKIC  229 (476)
T ss_dssp             CTTCCEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHH
T ss_pred             ecCCCeEEEeccchhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHh
Confidence            5677899999999988766666677899999999999987765 688999999999999999999999988888888999


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      .+.+..|..++
T Consensus       230 ~~~~~~p~~~s  240 (476)
T 2y94_A          230 DGIFYTPQYLN  240 (476)
T ss_dssp             TTCCCCCTTCC
T ss_pred             cCCcCCCccCC
Confidence            88888887664

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.68  E-value=6.6e-17  Score=100.46  Aligned_cols=90  Identities=26%  Similarity=0.457  Sum_probs=76.1

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC----CHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE----DEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~----~~~~~~~   77 (92)
                      +.++.+||+|||.+..........+.+||+.|+|||++.+..++.+.|+|++|++++++++|..||.+.    ....+..
T Consensus       320 d~~g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~  399 (576)
T 2acx_A          320 DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER  399 (576)
T ss_dssp             CTTSCEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHH
T ss_pred             eCCCCeEEEecccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHH
Confidence            567899999999998776666666779999999999998888899999999999999999999999875    3456677


Q ss_pred             HHHhCCCcCCCCCC
Q psy8825          78 AITDHSVSYPKMAV   91 (92)
Q Consensus        78 ~i~~~~~~~p~~~~   91 (92)
                      .+......+|..++
T Consensus       400 ~i~~~~~~~p~~~s  413 (576)
T 2acx_A          400 LVKEVPEEYSERFS  413 (576)
T ss_dssp             HHHHCCCCCCTTSC
T ss_pred             HhhcccccCCccCC
Confidence            77777777777654

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.68  E-value=6e-17  Score=97.31  Aligned_cols=82  Identities=26%  Similarity=0.518  Sum_probs=69.8

Q ss_pred             CCCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCC----CCchhhHHhHHHHHHHHHhCCCCCCCCCHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQP----YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE   74 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~----~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~   74 (92)
                      +++++.+||+|||.+.......  ...+.+||+.|+|||++....    ++.+.|+|++|++++++++|..||.+.+..+
T Consensus       201 l~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~  280 (410)
T 3v8s_A          201 LDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG  280 (410)
T ss_dssp             ECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred             ECCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh
Confidence            3578899999999997765443  345789999999999987654    6789999999999999999999999999988


Q ss_pred             HHHHHHhC
Q psy8825          75 LFAAITDH   82 (92)
Q Consensus        75 ~~~~i~~~   82 (92)
                      .+.+|...
T Consensus       281 ~~~~i~~~  288 (410)
T 3v8s_A          281 TYSKIMNH  288 (410)
T ss_dssp             HHHHHHTH
T ss_pred             HHHHHHhc
Confidence            88888764

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.68  E-value=3.9e-16  Score=94.58  Aligned_cols=86  Identities=28%  Similarity=0.502  Sum_probs=74.7

Q ss_pred             CCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           3 ESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      .++.+||.|||.+...... ......+||+.|+|||++.+..++.+.|+|++|++++++++|..||.+.+..+.+..+..
T Consensus       148 ~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~  227 (444)
T 3soa_A          148 KGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKA  227 (444)
T ss_dssp             TTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh
Confidence            4578999999999776544 334567899999999999888899999999999999999999999999999999999999


Q ss_pred             CCCcCCC
Q psy8825          82 HSVSYPK   88 (92)
Q Consensus        82 ~~~~~p~   88 (92)
                      +.+.+|.
T Consensus       228 ~~~~~~~  234 (444)
T 3soa_A          228 GAYDFPS  234 (444)
T ss_dssp             TCCCCCT
T ss_pred             CCCCCCc
Confidence            8877664

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.67  E-value=7.7e-17  Score=97.50  Aligned_cols=89  Identities=27%  Similarity=0.476  Sum_probs=71.7

Q ss_pred             CCCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhc-----cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIIL-----YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEE   73 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~-----~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~   73 (92)
                      ++.++.+||+|||.+.......  .....+||+.|+|||++.     ...++.+.|+|++|++++++++|..||.+.+..
T Consensus       208 l~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~  287 (437)
T 4aw2_A          208 MDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV  287 (437)
T ss_dssp             ECTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             EcCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh
Confidence            3578899999999987765443  234578999999999986     345788999999999999999999999999988


Q ss_pred             HHHHHHHhC--CCcCCCC
Q psy8825          74 ELFAAITDH--SVSYPKM   89 (92)
Q Consensus        74 ~~~~~i~~~--~~~~p~~   89 (92)
                      +.+.+|...  .+.+|..
T Consensus       288 ~~~~~i~~~~~~~~~p~~  305 (437)
T 4aw2_A          288 ETYGKIMNHKERFQFPTQ  305 (437)
T ss_dssp             HHHHHHHTHHHHCCCCSS
T ss_pred             HHHHhhhhccccccCCcc
Confidence            888888753  2445543

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.66  E-value=6.4e-16  Score=91.76  Aligned_cols=85  Identities=18%  Similarity=0.336  Sum_probs=74.6

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH   82 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~   82 (92)
                      .++.+||.|||.+............+||+.|++||++.+..++.+.|+|++|++++++++|..||.+.+..+.+..|...
T Consensus       224 ~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~  303 (373)
T 2x4f_A          224 DAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILAC  303 (373)
T ss_dssp             TTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT
T ss_pred             CCCcEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Confidence            45679999999998877666666778999999999998888899999999999999999999999999988888888887


Q ss_pred             CCcCC
Q psy8825          83 SVSYP   87 (92)
Q Consensus        83 ~~~~p   87 (92)
                      .+.++
T Consensus       304 ~~~~~  308 (373)
T 2x4f_A          304 RWDLE  308 (373)
T ss_dssp             CCCSC
T ss_pred             cCCCC
Confidence            76655

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.66  E-value=1.8e-17  Score=97.28  Aligned_cols=90  Identities=23%  Similarity=0.373  Sum_probs=71.3

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+..........+.+||+.|++||.+.+..+ +.+.|+|++|++++++++|..||.+........++.
T Consensus       142 ~~~~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~  221 (336)
T 3h4j_B          142 DDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVN  221 (336)
T ss_dssp             CTTCCEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCC
T ss_pred             cCCCCEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHH
Confidence            4677899999999987766666777899999999999987766 688999999999999999999998765444444455


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      ...+.+|..++
T Consensus       222 ~~~~~~p~~~s  232 (336)
T 3h4j_B          222 SCVYVMPDFLS  232 (336)
T ss_dssp             SSCCCCCTTSC
T ss_pred             cCCCCCcccCC
Confidence            55555555443

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.66  E-value=9.5e-16  Score=89.47  Aligned_cols=82  Identities=23%  Similarity=0.431  Sum_probs=71.7

Q ss_pred             ccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCc
Q psy8825           6 PFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVS   85 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~~~   85 (92)
                      .+||.|||.+............+||+.|++||++.+..++.+.|+|++|++++++++|..||.+....+.+..+....+.
T Consensus       156 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~  235 (326)
T 2y0a_A          156 RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE  235 (326)
T ss_dssp             CEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCC
T ss_pred             CEEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCC
Confidence            78999999998776666666778999999999998888999999999999999999999999998888888888776665


Q ss_pred             CC
Q psy8825          86 YP   87 (92)
Q Consensus        86 ~p   87 (92)
                      ++
T Consensus       236 ~~  237 (326)
T 2y0a_A          236 FE  237 (326)
T ss_dssp             CC
T ss_pred             cC
Confidence            54

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.65  E-value=2.4e-16  Score=91.07  Aligned_cols=80  Identities=19%  Similarity=0.287  Sum_probs=70.3

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+||.|||.+............+||+.|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+.+.++.+
T Consensus       154 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~  233 (308)
T 3g33_A          154 TSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD  233 (308)
T ss_dssp             CTTSCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHH
T ss_pred             cCCCCEEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            46788999999999877666666667899999999999888899999999999999999999999999988888777765

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.65  E-value=4.6e-16  Score=92.52  Aligned_cols=80  Identities=19%  Similarity=0.256  Sum_probs=64.5

Q ss_pred             CCCCccccCCCccccccCC----------------------CCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRP----------------------GRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLY   58 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~----------------------~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~   58 (92)
                      +.++.+||.|||.++....                      .......+||+.|+|||++.+ ..++.+.|+|++|++++
T Consensus       143 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~  222 (388)
T 3oz6_A          143 NAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILG  222 (388)
T ss_dssp             CTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHH
T ss_pred             cCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHH
Confidence            5678899999999876532                      112344689999999999876 56889999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHh
Q psy8825          59 EMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus        59 ~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      ++++|..||.+.+..+++.+|..
T Consensus       223 ell~g~~pf~~~~~~~~~~~i~~  245 (388)
T 3oz6_A          223 EILCGKPIFPGSSTMNQLERIIG  245 (388)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHH
Confidence            99999999999998888877764

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.64  E-value=1.4e-15  Score=92.78  Aligned_cols=84  Identities=18%  Similarity=0.376  Sum_probs=70.6

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH   82 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~   82 (92)
                      .++.+||.|||.+............+||+.|++||++.+ .++.+.|+|++|++++++++|..||.+.+..+.+.++..+
T Consensus       159 ~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~  237 (486)
T 3mwu_A          159 KDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETG  237 (486)
T ss_dssp             TTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred             CCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence            456799999999987776666677899999999999875 4889999999999999999999999999999999999888


Q ss_pred             CCcCC
Q psy8825          83 SVSYP   87 (92)
Q Consensus        83 ~~~~p   87 (92)
                      .+.++
T Consensus       238 ~~~~~  242 (486)
T 3mwu_A          238 KYAFD  242 (486)
T ss_dssp             CCCSC
T ss_pred             CCCCC
Confidence            76544

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.64  E-value=5.7e-16  Score=93.14  Aligned_cols=81  Identities=28%  Similarity=0.484  Sum_probs=68.0

Q ss_pred             CCCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhc-------cCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           1 MGESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIIL-------YQPYGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~-------~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      +++++.+||+|||.+.......  .....+||+.|+|||++.       ...++.+.|+|++|++++++++|..||.+.+
T Consensus       195 ld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~  274 (412)
T 2vd5_A          195 LDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS  274 (412)
T ss_dssp             ECTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             ecCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC
Confidence            3577899999999997765443  234579999999999986       2457889999999999999999999999999


Q ss_pred             HHHHHHHHHh
Q psy8825          72 EEELFAAITD   81 (92)
Q Consensus        72 ~~~~~~~i~~   81 (92)
                      ..+.+.+|..
T Consensus       275 ~~~~~~~i~~  284 (412)
T 2vd5_A          275 TAETYGKIVH  284 (412)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHHh
Confidence            8888888775

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.64  E-value=7.2e-16  Score=92.01  Aligned_cols=85  Identities=24%  Similarity=0.390  Sum_probs=73.2

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHS   83 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~   83 (92)
                      ++.+||.|||.+............+||+.|++||++....++.+.|+|++|++++++++|..||.+.+..+.+..+....
T Consensus       187 ~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~  266 (387)
T 1kob_A          187 ASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCD  266 (387)
T ss_dssp             CCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCC
T ss_pred             CCceEEEecccceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Confidence            46799999999987765554555689999999999988888999999999999999999999999999888888888877


Q ss_pred             CcCCC
Q psy8825          84 VSYPK   88 (92)
Q Consensus        84 ~~~p~   88 (92)
                      +.++.
T Consensus       267 ~~~~~  271 (387)
T 1kob_A          267 WEFDE  271 (387)
T ss_dssp             CCCCS
T ss_pred             CCCCc
Confidence            66553

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.63  E-value=1e-15  Score=90.66  Aligned_cols=81  Identities=17%  Similarity=0.249  Sum_probs=58.7

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+||.|||.+............+||+.|++||++.+..++.+.|+|++|++++++++|..||.+.+..+.+.++.+
T Consensus       161 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  240 (371)
T 2xrw_A          161 KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE  240 (371)
T ss_dssp             CTTSCEEECCCCC----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC
T ss_pred             cCCCCEEEEEeecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            46778999999999776555555667899999999999888899999999999999999999999999988888877766


Q ss_pred             C
Q psy8825          82 H   82 (92)
Q Consensus        82 ~   82 (92)
                      .
T Consensus       241 ~  241 (371)
T 2xrw_A          241 Q  241 (371)
T ss_dssp             -
T ss_pred             H
Confidence            4

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.63  E-value=4.1e-16  Score=90.94  Aligned_cols=84  Identities=18%  Similarity=0.349  Sum_probs=73.8

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHS   83 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~   83 (92)
                      ++.+|+.|||.+............+|++.|++||++.+..++.+.|+|++|++++++++|..||.+.+..+.+..+....
T Consensus       140 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~  219 (321)
T 1tki_A          140 SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAE  219 (321)
T ss_dssp             CCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCC
Confidence            67899999999987766655556789999999999988778899999999999999999999999999888888888887


Q ss_pred             CcCC
Q psy8825          84 VSYP   87 (92)
Q Consensus        84 ~~~p   87 (92)
                      +.++
T Consensus       220 ~~~~  223 (321)
T 1tki_A          220 YTFD  223 (321)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            7655

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.62  E-value=2.1e-15  Score=90.65  Aligned_cols=77  Identities=21%  Similarity=0.354  Sum_probs=65.8

Q ss_pred             CccccCCCccccccCCCCCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           5 QPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         5 ~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.+||.|||.+............+||+.|++||++.+. .++.+.|+|++|++++++++|..||.+.+..+.+.+|.+
T Consensus       194 ~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~  271 (420)
T 1j1b_A          194 AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK  271 (420)
T ss_dssp             TEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            46899999999877666556667899999999998664 688999999999999999999999999888777766654

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.62  E-value=2.3e-15  Score=92.01  Aligned_cols=84  Identities=17%  Similarity=0.421  Sum_probs=72.9

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH   82 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~   82 (92)
                      .++.+||.|||.+............+||+.|+|||++. ..++.+.|+|++|++++++++|..||.+.+..+.+.++..+
T Consensus       174 ~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~  252 (494)
T 3lij_A          174 KDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKG  252 (494)
T ss_dssp             TTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred             CCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence            35569999999998776666667789999999999986 45888999999999999999999999999999999999888


Q ss_pred             CCcCC
Q psy8825          83 SVSYP   87 (92)
Q Consensus        83 ~~~~p   87 (92)
                      .+.++
T Consensus       253 ~~~~~  257 (494)
T 3lij_A          253 KYTFD  257 (494)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            77654

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.62  E-value=9.1e-16  Score=91.80  Aligned_cols=84  Identities=18%  Similarity=0.320  Sum_probs=60.3

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH----HHHHHH
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEE----ELFAAI   79 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~----~~~~~i   79 (92)
                      ++.+||.|||.+..........+.+||+.|++||++....++.+.|+|++|++++++++|..||.+.+..    ....++
T Consensus       200 ~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i  279 (400)
T 1nxk_A          200 NAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI  279 (400)
T ss_dssp             TCCEEECCCTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHH
T ss_pred             CccEEEEecccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHH
Confidence            6789999999998766555566789999999999998888999999999999999999999999875432    244556


Q ss_pred             HhCCCcCC
Q psy8825          80 TDHSVSYP   87 (92)
Q Consensus        80 ~~~~~~~p   87 (92)
                      ..+.+.+|
T Consensus       280 ~~~~~~~~  287 (400)
T 1nxk_A          280 RMGQYEFP  287 (400)
T ss_dssp             HHTCCCCC
T ss_pred             HcCcccCC
Confidence            66666555

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.61  E-value=2.8e-15  Score=86.49  Aligned_cols=81  Identities=20%  Similarity=0.399  Sum_probs=67.8

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+...... ......+||+.|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+....+.
T Consensus       150 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~  229 (297)
T 3fxz_A          150 GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA  229 (297)
T ss_dssp             CTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH
T ss_pred             CCCCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            56788999999998776544 34556789999999999988889999999999999999999999999888776665555


Q ss_pred             hC
Q psy8825          81 DH   82 (92)
Q Consensus        81 ~~   82 (92)
                      ..
T Consensus       230 ~~  231 (297)
T 3fxz_A          230 TN  231 (297)
T ss_dssp             HH
T ss_pred             hC
Confidence            43

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.61  E-value=2.9e-15  Score=89.41  Aligned_cols=79  Identities=19%  Similarity=0.312  Sum_probs=68.3

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      .++.+||.|||.+.............||+.|+|||.+.+. .++.+.|+|++|++++++++|..||.+.+..+.+..|.+
T Consensus       177 ~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~  256 (394)
T 4e7w_A          177 PSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIK  256 (394)
T ss_dssp             TTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            5678999999999887666666677899999999998664 588999999999999999999999999988877777665

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.61  E-value=5.3e-15  Score=84.48  Aligned_cols=84  Identities=30%  Similarity=0.521  Sum_probs=73.3

Q ss_pred             CccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Q psy8825           5 QPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSV   84 (92)
Q Consensus         5 ~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~~   84 (92)
                      ..+||.|||.+.............|++.|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+....+.....
T Consensus       145 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~  224 (284)
T 3kk8_A          145 AAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY  224 (284)
T ss_dssp             CCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC
T ss_pred             CcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccc
Confidence            45899999999777666666678899999999999888889999999999999999999999999998888888888776


Q ss_pred             cCCC
Q psy8825          85 SYPK   88 (92)
Q Consensus        85 ~~p~   88 (92)
                      .+|.
T Consensus       225 ~~~~  228 (284)
T 3kk8_A          225 DYPS  228 (284)
T ss_dssp             CCCT
T ss_pred             cCCc
Confidence            6553

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.61  E-value=1.6e-16  Score=92.27  Aligned_cols=67  Identities=12%  Similarity=0.063  Sum_probs=50.0

Q ss_pred             CCCCCccccCCCccccccCCCC-----CCCCCCcCCcCccchhhccC------CCCchhhHHhHHHHHHHHHhCCCCC
Q psy8825           1 MGESQPFRERTLSHQDKIRPGR-----GSNPRPSAYSILLFQIILYQ------PYGKSVDWWAYGVLLYEMLVGQPPF   67 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~-----~~~~~~g~~~~~~pe~~~~~------~~~~~~~~ws~g~~~~~~~~g~~p~   67 (92)
                      ++.++.+||+|||+++......     ...+.+||+.|||||++.+.      .++.+.|+||+|+++||+++|..|+
T Consensus       141 l~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~  218 (303)
T 3hmm_A          141 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG  218 (303)
T ss_dssp             ECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBT
T ss_pred             ECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCC
Confidence            4678899999999987664432     23346899999999998654      2567899999999999999986544

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.61  E-value=2.3e-15  Score=87.31  Aligned_cols=90  Identities=13%  Similarity=0.220  Sum_probs=61.9

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+...... .......||+.|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+....+.
T Consensus       173 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~  252 (309)
T 3p86_A          173 DKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG  252 (309)
T ss_dssp             CTTCCEEECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH
T ss_pred             eCCCcEEECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            46778999999998655433 23445689999999999988888999999999999999999999999988877776664


Q ss_pred             h--CCCcCCCCCC
Q psy8825          81 D--HSVSYPKMAV   91 (92)
Q Consensus        81 ~--~~~~~p~~~~   91 (92)
                      .  ....+|..++
T Consensus       253 ~~~~~~~~~~~~~  265 (309)
T 3p86_A          253 FKCKRLEIPRNLN  265 (309)
T ss_dssp             HSCCCCCCCTTSC
T ss_pred             hcCCCCCCCccCC
Confidence            3  3345555443

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.61  E-value=5.5e-15  Score=85.92  Aligned_cols=82  Identities=26%  Similarity=0.444  Sum_probs=71.8

Q ss_pred             ccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCc
Q psy8825           6 PFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVS   85 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~~~   85 (92)
                      .+||.|||.+.............|++.|++||.+.+..++.+.|+|++|++++++++|..||.+....+.+..+....+.
T Consensus       157 ~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~  236 (321)
T 2a2a_A          157 HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD  236 (321)
T ss_dssp             CEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC
T ss_pred             CEEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccc
Confidence            68999999998776666666778999999999998888899999999999999999999999998888888888877665


Q ss_pred             CC
Q psy8825          86 YP   87 (92)
Q Consensus        86 ~p   87 (92)
                      ++
T Consensus       237 ~~  238 (321)
T 2a2a_A          237 FD  238 (321)
T ss_dssp             CC
T ss_pred             cC
Confidence            54

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.61  E-value=2.3e-15  Score=89.41  Aligned_cols=78  Identities=19%  Similarity=0.350  Sum_probs=66.8

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH   82 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~   82 (92)
                      .++.+||.|||.+.....  .....+||+.|+|||++.+..++.+.|+|++|++++++++|..||.+.+..+.+.+|.+.
T Consensus       196 ~~~~~kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~  273 (382)
T 2vx3_A          196 KRSAIKIVDFGSSCQLGQ--RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEV  273 (382)
T ss_dssp             TSCCEEECCCTTCEETTC--CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             CCCcEEEEeccCceeccc--ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            356799999999876532  344678999999999999888999999999999999999999999999888887777664

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.60  E-value=5.4e-15  Score=86.48  Aligned_cols=90  Identities=20%  Similarity=0.331  Sum_probs=76.2

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+...... .......|+..|++||.+.+..++.+.|+|++|++++++++|..||.+....+....+.
T Consensus       175 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  254 (335)
T 2owb_A          175 NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK  254 (335)
T ss_dssp             CTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred             cCCCCEEEeeccCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHh
Confidence            45678999999998776433 34556789999999999988888899999999999999999999999988888888888


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      ...+.+|..++
T Consensus       255 ~~~~~~~~~~~  265 (335)
T 2owb_A          255 KNEYSIPKHIN  265 (335)
T ss_dssp             HTCCCCCTTSC
T ss_pred             cCCCCCCccCC
Confidence            88888777654

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.60  E-value=4.4e-15  Score=87.87  Aligned_cols=86  Identities=24%  Similarity=0.453  Sum_probs=72.3

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc------CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY------QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~------~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      +.++.+|+.|||.+..+.........+||+.|++||++.+      ..++.+.|+|++|++++++++|..||.+.+....
T Consensus       234 ~~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~  313 (365)
T 2y7j_A          234 DDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILM  313 (365)
T ss_dssp             CTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             CCCCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHH
Confidence            4678899999999988777666777899999999999863      2467889999999999999999999999888888


Q ss_pred             HHHHHhCCCcCC
Q psy8825          76 FAAITDHSVSYP   87 (92)
Q Consensus        76 ~~~i~~~~~~~p   87 (92)
                      +..+..+.+.++
T Consensus       314 ~~~i~~~~~~~~  325 (365)
T 2y7j_A          314 LRMIMEGQYQFS  325 (365)
T ss_dssp             HHHHHHTCCCCC
T ss_pred             HHHHHhCCCCCC
Confidence            887877765543

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.60  E-value=4.7e-15  Score=86.48  Aligned_cols=85  Identities=24%  Similarity=0.404  Sum_probs=67.5

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHS   83 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~   83 (92)
                      ++.+||.|||.+............+|++.|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+....+....
T Consensus       170 ~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~  249 (327)
T 3lm5_A          170 LGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVN  249 (327)
T ss_dssp             BCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred             CCcEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcc
Confidence            57899999999987766655666789999999999988889999999999999999999999999998888888877766


Q ss_pred             CcCCC
Q psy8825          84 VSYPK   88 (92)
Q Consensus        84 ~~~p~   88 (92)
                      ..++.
T Consensus       250 ~~~~~  254 (327)
T 3lm5_A          250 VDYSE  254 (327)
T ss_dssp             CCCCT
T ss_pred             cccCc
Confidence            55443

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.60  E-value=8e-15  Score=83.54  Aligned_cols=86  Identities=22%  Similarity=0.515  Sum_probs=73.8

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+|+.|||.+.............|++.|++||.+.+. ++.+.|+|++|++++++++|..||.+.+..+....+.+
T Consensus       143 ~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~  221 (277)
T 3f3z_A          143 SPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIRE  221 (277)
T ss_dssp             STTCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCCCcEEEEecccceeccCccchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            45678999999999877766666778899999999998654 78899999999999999999999999988888888888


Q ss_pred             CCCcCCC
Q psy8825          82 HSVSYPK   88 (92)
Q Consensus        82 ~~~~~p~   88 (92)
                      ....+|.
T Consensus       222 ~~~~~~~  228 (277)
T 3f3z_A          222 GTFTFPE  228 (277)
T ss_dssp             CCCCCCH
T ss_pred             CCCCCCc
Confidence            8776654

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.60  E-value=6.7e-15  Score=83.98  Aligned_cols=89  Identities=22%  Similarity=0.424  Sum_probs=71.9

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.++|.|||.+..... .......|+..|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+....+..
T Consensus       143 ~~~~~~~l~Dfg~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  221 (279)
T 3fdn_A          143 GSAGELKIADFGWSVHAPS-SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR  221 (279)
T ss_dssp             CTTSCEEECSCCEESCC---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH
T ss_pred             cCCCCEEEEeccccccCCc-ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHh
Confidence            5678899999998755433 334456899999999999888888899999999999999999999999999889889988


Q ss_pred             CCCcCCCCCC
Q psy8825          82 HSVSYPKMAV   91 (92)
Q Consensus        82 ~~~~~p~~~~   91 (92)
                      ....+|..++
T Consensus       222 ~~~~~~~~~~  231 (279)
T 3fdn_A          222 VEFTFPDFVT  231 (279)
T ss_dssp             TCCCCCTTSC
T ss_pred             CCCCCCCcCC
Confidence            8888877654

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.60  E-value=8.6e-16  Score=93.53  Aligned_cols=85  Identities=18%  Similarity=0.416  Sum_probs=73.2

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+||.|||.+............+||+.|++||++.+ .++.+.|+|++|++++++++|..||.+.+..+.+.++..
T Consensus       163 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~  241 (484)
T 3nyv_A          163 SKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK  241 (484)
T ss_dssp             STTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCCCcEEEEeeeeeEEcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc
Confidence            3567899999999887766655556689999999999865 588899999999999999999999999999999999998


Q ss_pred             CCCcCC
Q psy8825          82 HSVSYP   87 (92)
Q Consensus        82 ~~~~~p   87 (92)
                      +.+.++
T Consensus       242 ~~~~~~  247 (484)
T 3nyv_A          242 GKYTFE  247 (484)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            876554

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.60  E-value=8.2e-15  Score=83.81  Aligned_cols=89  Identities=24%  Similarity=0.377  Sum_probs=74.9

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+||.|||.+..... .......|+..|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+....+..
T Consensus       148 ~~~~~~kl~Dfg~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~  226 (284)
T 2vgo_A          148 GYKGELKIADFGWSVHAPS-LRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN  226 (284)
T ss_dssp             CTTCCEEECCCTTCEECSS-SCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred             cCCCCEEEecccccccCcc-cccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhc
Confidence            4677899999998855433 334567899999999999888888999999999999999999999999888888888888


Q ss_pred             CCCcCCCCCC
Q psy8825          82 HSVSYPKMAV   91 (92)
Q Consensus        82 ~~~~~p~~~~   91 (92)
                      ....+|..++
T Consensus       227 ~~~~~~~~~~  236 (284)
T 2vgo_A          227 VDLKFPPFLS  236 (284)
T ss_dssp             TCCCCCTTSC
T ss_pred             cccCCCCcCC
Confidence            8888777654

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.59  E-value=8.5e-15  Score=89.67  Aligned_cols=81  Identities=16%  Similarity=0.409  Sum_probs=71.7

Q ss_pred             ccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCc
Q psy8825           6 PFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVS   85 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~~~   85 (92)
                      .+||.|||.+............+||+.|++||++. ..++.+.|+|++|++++++++|..||.+.+..+++..+..+.+.
T Consensus       187 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~  265 (504)
T 3q5i_A          187 NIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYY  265 (504)
T ss_dssp             SEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC
T ss_pred             cEEEEECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC
Confidence            68999999998877666667789999999999986 45888999999999999999999999999999999999988776


Q ss_pred             CC
Q psy8825          86 YP   87 (92)
Q Consensus        86 ~p   87 (92)
                      ++
T Consensus       266 ~~  267 (504)
T 3q5i_A          266 FD  267 (504)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.59  E-value=4.2e-15  Score=87.45  Aligned_cols=82  Identities=17%  Similarity=0.202  Sum_probs=69.4

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHS   83 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~   83 (92)
                      ++.+||.|||.+.....  .....+||+.|++||++.+..++.+.|+|++|++++++++|..||.+.+..+.+..+....
T Consensus       198 ~~~~kl~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~  275 (360)
T 3llt_A          198 STGIKLIDFGCATFKSD--YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESII  275 (360)
T ss_dssp             CCCEEECCCTTCEETTS--CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHT
T ss_pred             CCCEEEEeccCceecCC--CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhc
Confidence            67899999999865432  3346789999999999998889999999999999999999999999998888888777765


Q ss_pred             CcCC
Q psy8825          84 VSYP   87 (92)
Q Consensus        84 ~~~p   87 (92)
                      .++|
T Consensus       276 ~~~p  279 (360)
T 3llt_A          276 QPIP  279 (360)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            5555

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.59  E-value=1.5e-14  Score=83.11  Aligned_cols=90  Identities=20%  Similarity=0.331  Sum_probs=75.7

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+...... .......|+..|++||.+.+..++.+.|+|++|++++++++|..||.+....+....+.
T Consensus       149 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~  228 (294)
T 2rku_A          149 NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK  228 (294)
T ss_dssp             CTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred             cCCCCEEEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Confidence            45678999999998766433 34455689999999999988888889999999999999999999999988888888888


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      .....+|..++
T Consensus       229 ~~~~~~~~~~~  239 (294)
T 2rku_A          229 KNEYSIPKHIN  239 (294)
T ss_dssp             TTCCCCCTTSC
T ss_pred             hccCCCccccC
Confidence            88887777654

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.59  E-value=8e-15  Score=87.11  Aligned_cols=79  Identities=20%  Similarity=0.376  Sum_probs=68.5

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      .++.+||.|||.+.............|++.|+|||.+.+. .++.+.|+|++|++++++++|..||.+.+..+.+..+.+
T Consensus       177 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  256 (383)
T 3eb0_A          177 KDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQ  256 (383)
T ss_dssp             TTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence            4678999999999887666666677899999999998765 478999999999999999999999999988888777765

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.59  E-value=4.2e-15  Score=87.49  Aligned_cols=85  Identities=19%  Similarity=0.294  Sum_probs=58.1

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHh
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE-EELFAAITD   81 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~-~~~~~~i~~   81 (92)
                      .++.+||.|||.+............+||+.|++||.+.+..++.+.|+|++|++++++++|..||.+... ...+..+..
T Consensus       186 ~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~  265 (349)
T 2w4o_A          186 PDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILN  265 (349)
T ss_dssp             TTCCEEECCCC----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHT
T ss_pred             CCCCEEEccCccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHh
Confidence            4678999999998776555555667899999999999888899999999999999999999999987544 346667777


Q ss_pred             CCCcCC
Q psy8825          82 HSVSYP   87 (92)
Q Consensus        82 ~~~~~p   87 (92)
                      ..+.++
T Consensus       266 ~~~~~~  271 (349)
T 2w4o_A          266 CEYYFI  271 (349)
T ss_dssp             TCCCCC
T ss_pred             CCCccC
Confidence            665443

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.59  E-value=4.1e-15  Score=88.07  Aligned_cols=79  Identities=19%  Similarity=0.294  Sum_probs=66.5

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+.....  .....+||+.|++||++.+ ..++.+.|+|++|++++++++|..||.+.+..+++..|.
T Consensus       162 ~~~~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~  239 (367)
T 1cm8_A          162 NEDCELKILDFGLARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIM  239 (367)
T ss_dssp             CTTCCEEECCCTTCEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             cCCCCEEEEeeeccccccc--ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            5678899999999876533  3445688999999999876 568899999999999999999999999998888877776


Q ss_pred             hC
Q psy8825          81 DH   82 (92)
Q Consensus        81 ~~   82 (92)
                      +.
T Consensus       240 ~~  241 (367)
T 1cm8_A          240 KV  241 (367)
T ss_dssp             HH
T ss_pred             Hh
Confidence            53

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.59  E-value=2.8e-15  Score=88.15  Aligned_cols=84  Identities=25%  Similarity=0.398  Sum_probs=69.7

Q ss_pred             CccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCC---CCHHHHHHHHH
Q psy8825           5 QPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG---EDEEELFAAIT   80 (92)
Q Consensus         5 ~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~---~~~~~~~~~i~   80 (92)
                      ..+||.|||.+...... ....+.+||+.|++||++.+..++.+.|+|++|++++++++|..||.+   ....+.+.+|.
T Consensus       157 ~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~  236 (342)
T 2qr7_A          157 ESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIG  236 (342)
T ss_dssp             GGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHH
T ss_pred             CeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHc
Confidence            45899999998766443 445667899999999999877788899999999999999999999986   45678888888


Q ss_pred             hCCCcCCC
Q psy8825          81 DHSVSYPK   88 (92)
Q Consensus        81 ~~~~~~p~   88 (92)
                      .+.+.++.
T Consensus       237 ~~~~~~~~  244 (342)
T 2qr7_A          237 SGKFSLSG  244 (342)
T ss_dssp             HCCCCCCS
T ss_pred             cCCcccCc
Confidence            88776653

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.58  E-value=7.3e-15  Score=86.23  Aligned_cols=85  Identities=18%  Similarity=0.266  Sum_probs=68.1

Q ss_pred             CCCCccccCCCccccccCCC-----CCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-----RGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-----~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      +.++.+||.|||.+......     ......+||+.|++||++.+ ..++.+.|+|++|++++++++|..||.+....+.
T Consensus       158 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  237 (351)
T 3mi9_A          158 TRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ  237 (351)
T ss_dssp             CTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             cCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence            56788999999998765422     23445688999999999876 4578999999999999999999999999988888


Q ss_pred             HHHHHhCCCcC
Q psy8825          76 FAAITDHSVSY   86 (92)
Q Consensus        76 ~~~i~~~~~~~   86 (92)
                      +..+......+
T Consensus       238 ~~~i~~~~~~~  248 (351)
T 3mi9_A          238 LALISQLCGSI  248 (351)
T ss_dssp             HHHHHHHHCCC
T ss_pred             HHHHHHHhCCC
Confidence            77776644333

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.58  E-value=3.4e-15  Score=90.00  Aligned_cols=78  Identities=22%  Similarity=0.333  Sum_probs=65.5

Q ss_pred             CCCc--cccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           3 ESQP--FRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         3 ~~~~--~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      .++.  +||.|||.+...  .....+.+||+.|+|||++.+..++.+.|+|++|++++++++|..||.+.+..+.+..+.
T Consensus       235 ~~~~~~vkL~DFG~a~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~  312 (429)
T 3kvw_A          235 QQGRSGIKVIDFGSSCYE--HQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI  312 (429)
T ss_dssp             STTSCCEEECCCTTCEET--TCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             cCCCcceEEeecccceec--CCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            4444  899999998554  333456789999999999988889999999999999999999999999998888877776


Q ss_pred             hC
Q psy8825          81 DH   82 (92)
Q Consensus        81 ~~   82 (92)
                      +.
T Consensus       313 ~~  314 (429)
T 3kvw_A          313 EL  314 (429)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.57  E-value=1.2e-14  Score=84.42  Aligned_cols=80  Identities=20%  Similarity=0.351  Sum_probs=66.4

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+||.|||.+...... ......+||+.|++||++.+. .++.+.|+|++|++++++++|..||.+.+..+.+..+
T Consensus       142 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i  221 (317)
T 2pmi_A          142 NKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI  221 (317)
T ss_dssp             CTTCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             cCCCCEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            56788999999998776433 344556899999999998764 5789999999999999999999999998887777776


Q ss_pred             Hh
Q psy8825          80 TD   81 (92)
Q Consensus        80 ~~   81 (92)
                      ..
T Consensus       222 ~~  223 (317)
T 2pmi_A          222 FD  223 (317)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.57  E-value=9.1e-15  Score=85.91  Aligned_cols=78  Identities=19%  Similarity=0.385  Sum_probs=67.2

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQP-YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~-~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      ++.+||.|||.+.............||+.|++||.+.+.. ++.+.|+|++|++++++++|..||.+.+....+..+.+
T Consensus       168 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~  246 (360)
T 3e3p_A          168 DGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVR  246 (360)
T ss_dssp             TTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHH
Confidence            6789999999998877666666778999999999986554 78999999999999999999999999888777777654

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.57  E-value=1.7e-14  Score=84.00  Aligned_cols=82  Identities=16%  Similarity=0.299  Sum_probs=69.0

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+|+.|||.+...... ......+||+.|++||.+....++.+.|+|++|++++++++|..||.+.+..+....+.
T Consensus       175 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~  254 (321)
T 2c30_A          175 TLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR  254 (321)
T ss_dssp             CTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH
T ss_pred             CCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Confidence            46778999999998766543 33456789999999999988888899999999999999999999999988877777776


Q ss_pred             hCC
Q psy8825          81 DHS   83 (92)
Q Consensus        81 ~~~   83 (92)
                      ...
T Consensus       255 ~~~  257 (321)
T 2c30_A          255 DSP  257 (321)
T ss_dssp             HSS
T ss_pred             cCC
Confidence            654

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.57  E-value=1.3e-14  Score=83.60  Aligned_cols=81  Identities=19%  Similarity=0.315  Sum_probs=60.7

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+||.|||.+.......  .....+||+.|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+...+.
T Consensus       145 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~  224 (294)
T 4eqm_A          145 DSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH  224 (294)
T ss_dssp             CTTSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHH
T ss_pred             CCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            467789999999987764432  334467999999999998888889999999999999999999999998876665555


Q ss_pred             HhC
Q psy8825          80 TDH   82 (92)
Q Consensus        80 ~~~   82 (92)
                      ...
T Consensus       225 ~~~  227 (294)
T 4eqm_A          225 IQD  227 (294)
T ss_dssp             HSS
T ss_pred             hhc
Confidence            444

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.57  E-value=1.8e-14  Score=82.94  Aligned_cols=87  Identities=22%  Similarity=0.353  Sum_probs=70.3

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCC---CCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQP---YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~---~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~   77 (92)
                      +.++.+||.|||.+...... ......+||+.|++||.+....   ++.+.|+|++|++++++++|..||.+........
T Consensus       171 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~  250 (298)
T 2zv2_A          171 GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHS  250 (298)
T ss_dssp             CTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             CCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHH
Confidence            56788999999998776543 2345578999999999987654   3677899999999999999999999988888777


Q ss_pred             HHHhCCCcCCC
Q psy8825          78 AITDHSVSYPK   88 (92)
Q Consensus        78 ~i~~~~~~~p~   88 (92)
                      .+......+|.
T Consensus       251 ~~~~~~~~~~~  261 (298)
T 2zv2_A          251 KIKSQALEFPD  261 (298)
T ss_dssp             HHHHCCCCCCS
T ss_pred             HHhcccCCCCC
Confidence            88777666553

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.57  E-value=6.1e-15  Score=86.00  Aligned_cols=75  Identities=15%  Similarity=0.150  Sum_probs=60.1

Q ss_pred             cccCCCccccccCCCCC--------CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC---CHHHH
Q psy8825           7 FRERTLSHQDKIRPGRG--------SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE---DEEEL   75 (92)
Q Consensus         7 ~~l~d~~~~~~~~~~~~--------~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~---~~~~~   75 (92)
                      +||.|||.+........        ....+||+.|++||.+.+..++.+.|+|++|++++++++|..||.+.   ...+.
T Consensus       149 ~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~  228 (330)
T 2izr_A          149 IHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKER  228 (330)
T ss_dssp             EEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHH
T ss_pred             EEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHH
Confidence            99999999876543321        34678999999999999888999999999999999999999999873   34444


Q ss_pred             HHHHHh
Q psy8825          76 FAAITD   81 (92)
Q Consensus        76 ~~~i~~   81 (92)
                      +..+..
T Consensus       229 ~~~i~~  234 (330)
T 2izr_A          229 YQKIGD  234 (330)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            444433

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.56  E-value=1.9e-14  Score=81.88  Aligned_cols=90  Identities=23%  Similarity=0.355  Sum_probs=65.3

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+|+.|||.+.............|++.|++||.+.+..+ +.+.|+|++|++++++++|..||.+.........+.
T Consensus       145 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~  224 (276)
T 2h6d_A          145 DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIR  224 (276)
T ss_dssp             CTTSCEEECCCCGGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             CCCCCEEEeecccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhh
Confidence            4567899999999877765555556789999999999887665 578999999999999999999999988888888888


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      .....+|..++
T Consensus       225 ~~~~~~~~~~~  235 (276)
T 2h6d_A          225 GGVFYIPEYLN  235 (276)
T ss_dssp             HCCCCCCTTSC
T ss_pred             cCcccCchhcC
Confidence            88777776543

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.56  E-value=1.3e-14  Score=84.16  Aligned_cols=80  Identities=18%  Similarity=0.268  Sum_probs=68.8

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+||.|||.+.............|+..|++||.+....++.+.|+|++|++++++++|..||.+.+..+.+.++..
T Consensus       154 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~  233 (326)
T 1blx_A          154 TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD  233 (326)
T ss_dssp             CTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             cCCCCEEEecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence            46778999999998776555555667899999999999888889999999999999999999999999888777777664

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.56  E-value=7.8e-15  Score=84.98  Aligned_cols=83  Identities=16%  Similarity=0.226  Sum_probs=60.4

Q ss_pred             CCCCccccCCCccccccCCCC----CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR----GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~----~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~   77 (92)
                      +.++.+||.|||.+.......    .....+|++.|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+...
T Consensus       150 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~  229 (311)
T 3ork_A          150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY  229 (311)
T ss_dssp             ETTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             cCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence            456789999999987664332    2334579999999999988889999999999999999999999999988877766


Q ss_pred             HHHhCCC
Q psy8825          78 AITDHSV   84 (92)
Q Consensus        78 ~i~~~~~   84 (92)
                      .+.....
T Consensus       230 ~~~~~~~  236 (311)
T 3ork_A          230 QHVREDP  236 (311)
T ss_dssp             HHHHCCC
T ss_pred             HHhcCCC
Confidence            6665543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.56  E-value=2.6e-14  Score=84.14  Aligned_cols=83  Identities=27%  Similarity=0.465  Sum_probs=66.6

Q ss_pred             CCccccCCCccccccCCCC-CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q psy8825           4 SQPFRERTLSHQDKIRPGR-GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH   82 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~   82 (92)
                      +..+|+.|||.+....... .....+||+.|++||++....++.+.|+|++|++++++++|..||.+. ..+....+...
T Consensus       169 ~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~i~~~  247 (351)
T 3c0i_A          169 SAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGIIKG  247 (351)
T ss_dssp             TCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS-HHHHHHHHHHT
T ss_pred             CCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc-HHHHHHHHHcC
Confidence            3459999999987765543 345678999999999998888899999999999999999999999875 34566666666


Q ss_pred             CCcCC
Q psy8825          83 SVSYP   87 (92)
Q Consensus        83 ~~~~p   87 (92)
                      .+.++
T Consensus       248 ~~~~~  252 (351)
T 3c0i_A          248 KYKMN  252 (351)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            55443

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.55  E-value=1.1e-14  Score=86.33  Aligned_cols=78  Identities=19%  Similarity=0.291  Sum_probs=55.9

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+.....  .....+||+.|++||++.+ ..++.+.|+|++|++++++++|..||.+.+..+++.+|.
T Consensus       166 ~~~~~~kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~  243 (367)
T 2fst_X          166 NEDCELKILDFGLARHTAD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL  243 (367)
T ss_dssp             CTTCCEEECC-----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             CCCCCEEEeeccccccccc--cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            5678899999999866433  2345689999999999876 567889999999999999999999999998887777766


Q ss_pred             h
Q psy8825          81 D   81 (92)
Q Consensus        81 ~   81 (92)
                      +
T Consensus       244 ~  244 (367)
T 2fst_X          244 R  244 (367)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.54  E-value=1.6e-14  Score=84.44  Aligned_cols=83  Identities=14%  Similarity=0.226  Sum_probs=66.9

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH   82 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~   82 (92)
                      .++.+||.|||.+....  ......+||+.|++||++.+..++.+.|+|++|++++++++|..||.+.+..+.+..+...
T Consensus       177 ~~~~~kl~Dfg~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~  254 (355)
T 2eu9_A          177 KNTSIRVADFGSATFDH--EHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKI  254 (355)
T ss_dssp             SCCCEEECCCTTCEETT--SCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             CCCcEEEeecCcccccc--ccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            46789999999986543  2334568999999999998888999999999999999999999999998877766666554


Q ss_pred             CCcCC
Q psy8825          83 SVSYP   87 (92)
Q Consensus        83 ~~~~p   87 (92)
                      ..++|
T Consensus       255 ~~~~p  259 (355)
T 2eu9_A          255 LGPIP  259 (355)
T ss_dssp             HCCCC
T ss_pred             cCCCc
Confidence            43333

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.54  E-value=4.3e-14  Score=83.00  Aligned_cols=80  Identities=19%  Similarity=0.308  Sum_probs=66.8

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+||.|||.+...... ......+||+.|++||.+.+. .++.+.|+|++|++++++++|.+||.+.+..+.+.++
T Consensus       146 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i  225 (346)
T 1ua2_A          146 DENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRI  225 (346)
T ss_dssp             CTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             cCCCCEEEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            56788999999998776433 345567899999999998654 4788999999999999999999999999888887777


Q ss_pred             Hh
Q psy8825          80 TD   81 (92)
Q Consensus        80 ~~   81 (92)
                      .+
T Consensus       226 ~~  227 (346)
T 1ua2_A          226 FE  227 (346)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.54  E-value=3.3e-14  Score=81.15  Aligned_cols=82  Identities=24%  Similarity=0.449  Sum_probs=65.1

Q ss_pred             ccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCc
Q psy8825           6 PFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVS   85 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~~~   85 (92)
                      .+||.|||.+.............|++.|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+.+..+......
T Consensus       150 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~  229 (283)
T 3bhy_A          150 RIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD  229 (283)
T ss_dssp             CEEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCC
T ss_pred             ceEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccC
Confidence            78999999987776555556678999999999998888899999999999999999999999998888888777776654


Q ss_pred             CC
Q psy8825          86 YP   87 (92)
Q Consensus        86 ~p   87 (92)
                      ++
T Consensus       230 ~~  231 (283)
T 3bhy_A          230 FD  231 (283)
T ss_dssp             CC
T ss_pred             Cc
Confidence            43

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.53  E-value=3.5e-14  Score=84.21  Aligned_cols=88  Identities=19%  Similarity=0.377  Sum_probs=69.0

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+||.|||.+.......   ......+++.|++||++.+..++.+.|+|++|++++++++ |..||.+.+..+...
T Consensus       237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~  316 (370)
T 2psq_A          237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK  316 (370)
T ss_dssp             CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred             CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            567889999999987664432   2333467789999999988889999999999999999998 999999887777776


Q ss_pred             HHHhCC-CcCCCC
Q psy8825          78 AITDHS-VSYPKM   89 (92)
Q Consensus        78 ~i~~~~-~~~p~~   89 (92)
                      .+..+. ...|..
T Consensus       317 ~~~~~~~~~~~~~  329 (370)
T 2psq_A          317 LLKEGHRMDKPAN  329 (370)
T ss_dssp             HHHTTCCCCCCTT
T ss_pred             HHhcCCCCCCCCC
Confidence            666653 334443

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.53  E-value=1.9e-14  Score=83.44  Aligned_cols=80  Identities=18%  Similarity=0.333  Sum_probs=63.0

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+||.|||.+...... ......+||+.|++||++.+ ..++.+.|+|++|++++++++|..||.+....+.+..+
T Consensus       153 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i  232 (311)
T 3niz_A          153 NSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKI  232 (311)
T ss_dssp             CTTCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHH
T ss_pred             CCCCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            56788999999998776533 34455688999999999876 45789999999999999999999999887665555555


Q ss_pred             Hh
Q psy8825          80 TD   81 (92)
Q Consensus        80 ~~   81 (92)
                      .+
T Consensus       233 ~~  234 (311)
T 3niz_A          233 FS  234 (311)
T ss_dssp             HH
T ss_pred             HH
Confidence            44

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.53  E-value=3.9e-14  Score=83.75  Aligned_cols=83  Identities=22%  Similarity=0.337  Sum_probs=55.0

Q ss_pred             ccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCch-hhHHhHHHHHHHHHhCCCCCCCCC----HHHHHHHHH
Q psy8825           6 PFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKS-VDWWAYGVLLYEMLVGQPPFDGED----EEELFAAIT   80 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~-~~~ws~g~~~~~~~~g~~p~~~~~----~~~~~~~i~   80 (92)
                      .+||.|||.+............+||+.|++||++.+..+... .|+|++|++++++++|..||.+..    ....+..+.
T Consensus       156 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~  235 (361)
T 3uc3_A          156 RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL  235 (361)
T ss_dssp             CEEECCCCCC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHH
T ss_pred             eEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHh
Confidence            489999999876555555566789999999999988777555 899999999999999999998743    356667777


Q ss_pred             hCCCcCCC
Q psy8825          81 DHSVSYPK   88 (92)
Q Consensus        81 ~~~~~~p~   88 (92)
                      ...+.+|.
T Consensus       236 ~~~~~~~~  243 (361)
T 3uc3_A          236 SVKYSIPD  243 (361)
T ss_dssp             TTCCCCCT
T ss_pred             cCCCCCCC
Confidence            77766665

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.53  E-value=6.8e-14  Score=80.17  Aligned_cols=84  Identities=19%  Similarity=0.315  Sum_probs=62.4

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH   82 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~   82 (92)
                      .++.+||.|||.+.............|++.|++||.+. ..++.+.|+|++|++++++++|..||.+.+..+....+...
T Consensus       162 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~  240 (285)
T 3is5_A          162 PHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYK  240 (285)
T ss_dssp             TTCCEEECCCCCCCC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             CCCCEEEEeeecceecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccC
Confidence            34679999999997766655566678999999999975 45788999999999999999999999998887777777665


Q ss_pred             CCcCC
Q psy8825          83 SVSYP   87 (92)
Q Consensus        83 ~~~~p   87 (92)
                      ...++
T Consensus       241 ~~~~~  245 (285)
T 3is5_A          241 EPNYA  245 (285)
T ss_dssp             CCCCC
T ss_pred             Ccccc
Confidence            54443

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.53  E-value=6.9e-14  Score=80.33  Aligned_cols=86  Identities=24%  Similarity=0.431  Sum_probs=72.2

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhc------cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIIL------YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~------~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      +.++.+||.|||.+.............|+..|++||.+.      ...++.+.|+|++|++++++++|..||.+.+....
T Consensus       158 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~  237 (298)
T 1phk_A          158 DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM  237 (298)
T ss_dssp             CTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             cCCCcEEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHH
Confidence            467789999999988776666667778999999999975      34567889999999999999999999999888888


Q ss_pred             HHHHHhCCCcCC
Q psy8825          76 FAAITDHSVSYP   87 (92)
Q Consensus        76 ~~~i~~~~~~~p   87 (92)
                      ...+....+.++
T Consensus       238 ~~~~~~~~~~~~  249 (298)
T 1phk_A          238 LRMIMSGNYQFG  249 (298)
T ss_dssp             HHHHHHTCCCCC
T ss_pred             HHHHhcCCcccC
Confidence            888887766554

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.53  E-value=2.3e-14  Score=83.53  Aligned_cols=80  Identities=21%  Similarity=0.318  Sum_probs=60.4

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+||.|||.+...... ......+||..|++||++.+ ..++.+.|+|++|++++++++|..||.+.+..+.+..+
T Consensus       134 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i  213 (324)
T 3mtl_A          134 NERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFI  213 (324)
T ss_dssp             CTTCCEEECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             CCCCCEEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            46778999999998765433 34455688999999999876 55789999999999999999999999999888777776


Q ss_pred             Hh
Q psy8825          80 TD   81 (92)
Q Consensus        80 ~~   81 (92)
                      .+
T Consensus       214 ~~  215 (324)
T 3mtl_A          214 FR  215 (324)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.52  E-value=1e-13  Score=82.38  Aligned_cols=82  Identities=21%  Similarity=0.388  Sum_probs=67.7

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      ++++.+||.|||.+.......   ......++..|++||.+.+..++.+.|+|++|++++++++ |..||.+.+..+...
T Consensus       225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~  304 (382)
T 3tt0_A          225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK  304 (382)
T ss_dssp             CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH
T ss_pred             cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            567889999999987664432   2334467889999999988889999999999999999998 999999988888877


Q ss_pred             HHHhCC
Q psy8825          78 AITDHS   83 (92)
Q Consensus        78 ~i~~~~   83 (92)
                      .+....
T Consensus       305 ~~~~~~  310 (382)
T 3tt0_A          305 LLKEGH  310 (382)
T ss_dssp             HHHTTC
T ss_pred             HHHcCC
Confidence            777653

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.52  E-value=4.7e-14  Score=81.37  Aligned_cols=86  Identities=23%  Similarity=0.403  Sum_probs=70.2

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+|+.|||.+..... ......+|++.|++||.+.+..++.+.|+|++|++++++++|..||.+....+....+.+
T Consensus       143 ~~~~~~kl~Dfg~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~  221 (304)
T 2jam_A          143 EENSKIMITDFGLSKMEQN-GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKE  221 (304)
T ss_dssp             STTCCEEBCSCSTTCCCCC-BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred             CCCCCEEEccCCcceecCC-CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc
Confidence            4567899999998865432 223334689999999999888889999999999999999999999999888888888888


Q ss_pred             CCCcCCC
Q psy8825          82 HSVSYPK   88 (92)
Q Consensus        82 ~~~~~p~   88 (92)
                      +.+.++.
T Consensus       222 ~~~~~~~  228 (304)
T 2jam_A          222 GYYEFES  228 (304)
T ss_dssp             CCCCCCT
T ss_pred             CCCCCCc
Confidence            7765543

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.52  E-value=4.4e-14  Score=82.29  Aligned_cols=82  Identities=17%  Similarity=0.362  Sum_probs=64.6

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+||.|||.+.......   ......|+..|++||.+....++.+.|+|++|++++++++ |..||.+....+...
T Consensus       149 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~  228 (325)
T 3kex_A          149 KSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPD  228 (325)
T ss_dssp             SSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHH
T ss_pred             CCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHH
Confidence            467889999999998765442   2334567889999999988889999999999999999999 999999887767766


Q ss_pred             HHHhCC
Q psy8825          78 AITDHS   83 (92)
Q Consensus        78 ~i~~~~   83 (92)
                      .+....
T Consensus       229 ~~~~~~  234 (325)
T 3kex_A          229 LLEKGE  234 (325)
T ss_dssp             HHHTTC
T ss_pred             HHHcCC
Confidence            666653

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.52  E-value=2.4e-14  Score=82.15  Aligned_cols=80  Identities=16%  Similarity=0.276  Sum_probs=61.5

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+||.|||.+...... ......+||+.|++||++.+. .++.+.|+|++|++++++++|..||.+.+..+.+.++
T Consensus       134 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~  213 (288)
T 1ob3_A          134 NREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRI  213 (288)
T ss_dssp             CTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             cCCCCEEEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            56788999999998766433 334456889999999998654 4789999999999999999999999998887777666


Q ss_pred             Hh
Q psy8825          80 TD   81 (92)
Q Consensus        80 ~~   81 (92)
                      .+
T Consensus       214 ~~  215 (288)
T 1ob3_A          214 FR  215 (288)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.52  E-value=1.3e-14  Score=85.66  Aligned_cols=65  Identities=14%  Similarity=0.206  Sum_probs=55.9

Q ss_pred             CCccccCCCccccccC---CCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCC
Q psy8825           4 SQPFRERTLSHQDKIR---PGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFD   68 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~---~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~   68 (92)
                      ++.+||.|||.+..+.   ........+||..|+|||++.+..++.+.|+|++|++++++++|..||.
T Consensus       219 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~  286 (365)
T 3e7e_A          219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKV  286 (365)
T ss_dssp             CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCE
T ss_pred             cCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccc
Confidence            6789999999996443   3344566789999999999998889999999999999999999998874

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.52  E-value=5e-14  Score=81.88  Aligned_cols=82  Identities=17%  Similarity=0.220  Sum_probs=66.1

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHS   83 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~   83 (92)
                      ++.+|+.|||.+.....  .....+||+.|++||.+.+..++.+.|+|++|++++++++|..||.+.+..+....+....
T Consensus       173 ~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~  250 (339)
T 1z57_A          173 NPDIKVVDFGSATYDDE--HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL  250 (339)
T ss_dssp             CCCEEECCCSSCEETTS--CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHH
T ss_pred             CCCceEeeCcccccCcc--ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence            45789999999865432  3345689999999999988889999999999999999999999999988777766665543


Q ss_pred             CcCC
Q psy8825          84 VSYP   87 (92)
Q Consensus        84 ~~~p   87 (92)
                      .++|
T Consensus       251 ~~~p  254 (339)
T 1z57_A          251 GPLP  254 (339)
T ss_dssp             CSCC
T ss_pred             CCCC
Confidence            3333

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.51  E-value=5e-14  Score=85.40  Aligned_cols=89  Identities=17%  Similarity=0.304  Sum_probs=70.0

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+||+|||.+.......  ......++..|+|||++....++.+.|+|++|++++++++ |..||.+.+..++...
T Consensus       318 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~  397 (454)
T 1qcf_A          318 SASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA  397 (454)
T ss_dssp             CTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH
T ss_pred             CCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            567789999999997764331  2233456778999999988889999999999999999998 9999999988888877


Q ss_pred             HHhCC-CcCCCCC
Q psy8825          79 ITDHS-VSYPKMA   90 (92)
Q Consensus        79 i~~~~-~~~p~~~   90 (92)
                      +..+. .+.|..+
T Consensus       398 i~~~~~~~~~~~~  410 (454)
T 1qcf_A          398 LERGYRMPRPENC  410 (454)
T ss_dssp             HHHTCCCCCCTTS
T ss_pred             HHcCCCCCCCCCC
Confidence            77653 3444443

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.51  E-value=6.8e-14  Score=81.81  Aligned_cols=82  Identities=17%  Similarity=0.387  Sum_probs=64.4

Q ss_pred             ccccCCCccccccCCCC-----CCCCCCcCCcCccchhhcc--CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Q psy8825           6 PFRERTLSHQDKIRPGR-----GSNPRPSAYSILLFQIILY--QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAA   78 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~-----~~~~~~g~~~~~~pe~~~~--~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~   78 (92)
                      .+||.|||.+.......     ......||+.|++||.+..  ..++.+.|+|++|++++++++|..||.+....+....
T Consensus       208 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~  287 (345)
T 3hko_A          208 EIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQ  287 (345)
T ss_dssp             CEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             eEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHH
Confidence            78999999987653211     2345689999999999865  5678899999999999999999999999888888888


Q ss_pred             HHhCCCcCC
Q psy8825          79 ITDHSVSYP   87 (92)
Q Consensus        79 i~~~~~~~p   87 (92)
                      +......++
T Consensus       288 ~~~~~~~~~  296 (345)
T 3hko_A          288 VLNKKLCFE  296 (345)
T ss_dssp             HHHCCCCTT
T ss_pred             HHhcccccC
Confidence            887765543

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.51  E-value=7.7e-14  Score=80.35  Aligned_cols=90  Identities=22%  Similarity=0.309  Sum_probs=73.1

Q ss_pred             CCCCccccCCCccccccCCC---CCCCCCCcCCcCccchhhccCCC--CchhhHHhHHHHHHHHHhCCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG---RGSNPRPSAYSILLFQIILYQPY--GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~---~~~~~~~g~~~~~~pe~~~~~~~--~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~   76 (92)
                      +.++.+|+.|||.+......   .......|+..|++||.+.+...  +.+.|+|++|++++++++|..||.+.+..+..
T Consensus       143 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~  222 (305)
T 2wtk_C          143 TTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLF  222 (305)
T ss_dssp             CTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             cCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHH
Confidence            46778999999998766432   23345679999999999876443  67899999999999999999999999888888


Q ss_pred             HHHHhCCCcCCCCCC
Q psy8825          77 AAITDHSVSYPKMAV   91 (92)
Q Consensus        77 ~~i~~~~~~~p~~~~   91 (92)
                      ..+....+.+|..++
T Consensus       223 ~~i~~~~~~~~~~~~  237 (305)
T 2wtk_C          223 ENIGKGSYAIPGDCG  237 (305)
T ss_dssp             HHHHHCCCCCCSSSC
T ss_pred             HHHhcCCCCCCCccC
Confidence            888888887776554

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.51  E-value=4.1e-14  Score=83.32  Aligned_cols=80  Identities=13%  Similarity=0.189  Sum_probs=57.1

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+............+|++.|++||.+.+ ..++.+.|+|++|++++++++|..||.+.+..+.+..+.
T Consensus       168 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~  247 (362)
T 3pg1_A          168 ADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV  247 (362)
T ss_dssp             CTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             cCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            4677899999999976655555666789999999999876 567899999999999999999999999988877776665


Q ss_pred             h
Q psy8825          81 D   81 (92)
Q Consensus        81 ~   81 (92)
                      +
T Consensus       248 ~  248 (362)
T 3pg1_A          248 E  248 (362)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.51  E-value=2.9e-14  Score=86.36  Aligned_cols=88  Identities=11%  Similarity=0.259  Sum_probs=67.2

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||+|||.+......  .....++..|++||.+.+..++.+.|+|++|++++++++ |..||.+.+..+....+.
T Consensus       323 ~~~~~~kl~DfG~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~  400 (450)
T 1k9a_A          323 SEDNVAKVSDFGLTKEASST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE  400 (450)
T ss_dssp             CTTSCEEECCCTTCEECC--------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHH
T ss_pred             CCCCCEEEeeCCCccccccc--ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            56788999999998754322  223467889999999998889999999999999999998 999999887777777776


Q ss_pred             hC-CCcCCCCCC
Q psy8825          81 DH-SVSYPKMAV   91 (92)
Q Consensus        81 ~~-~~~~p~~~~   91 (92)
                      .+ ....|..++
T Consensus       401 ~~~~~~~p~~~~  412 (450)
T 1k9a_A          401 KGYKMDAPDGCP  412 (450)
T ss_dssp             TTCCCCCCTTCC
T ss_pred             cCCCCCCCCcCC
Confidence            65 344555443

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.51  E-value=3.9e-14  Score=82.67  Aligned_cols=82  Identities=23%  Similarity=0.393  Sum_probs=48.5

Q ss_pred             ccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCC-------HHHHHH
Q psy8825           6 PFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED-------EEELFA   77 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~-------~~~~~~   77 (92)
                      .+||.|||.+...... ....+.+||+.|++||.+....++.+.|+|++|++++++++|..||.+.+       ..+.+.
T Consensus       147 ~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~  226 (325)
T 3kn6_A          147 EIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMK  226 (325)
T ss_dssp             EEEECCCTTCEECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHH
T ss_pred             cEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHH
Confidence            7899999998765443 34556789999999999988889999999999999999999999998643       356677


Q ss_pred             HHHhCCCcCC
Q psy8825          78 AITDHSVSYP   87 (92)
Q Consensus        78 ~i~~~~~~~p   87 (92)
                      ++..+.+.++
T Consensus       227 ~i~~~~~~~~  236 (325)
T 3kn6_A          227 KIKKGDFSFE  236 (325)
T ss_dssp             HHTTTCCCCC
T ss_pred             HHHcCCCCCC
Confidence            7777766554

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.50  E-value=6.1e-14  Score=80.48  Aligned_cols=65  Identities=14%  Similarity=0.080  Sum_probs=55.4

Q ss_pred             ccccCCCccccccCCCC--------CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           6 PFRERTLSHQDKIRPGR--------GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~--------~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      .+||.|||.+.......        ......||+.|++||.+.+..++.+.|+|++|++++++++|..||.+.
T Consensus       149 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  221 (298)
T 1csn_A          149 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL  221 (298)
T ss_dssp             CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             eEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchh
Confidence            39999999987664432        234568999999999998888999999999999999999999999874

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.50  E-value=7.3e-14  Score=84.68  Aligned_cols=89  Identities=18%  Similarity=0.322  Sum_probs=65.1

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+||.|||.+.......  ......++..|+|||.+....++.+.|+|++|++++++++ |..||.+....+....
T Consensus       314 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~  393 (452)
T 1fmk_A          314 GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ  393 (452)
T ss_dssp             CGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH
T ss_pred             CCCCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            456789999999987664332  2223456778999999988889999999999999999999 9999999988888887


Q ss_pred             HHhCC-CcCCCCC
Q psy8825          79 ITDHS-VSYPKMA   90 (92)
Q Consensus        79 i~~~~-~~~p~~~   90 (92)
                      +..+. .+.|..+
T Consensus       394 i~~~~~~~~~~~~  406 (452)
T 1fmk_A          394 VERGYRMPCPPEC  406 (452)
T ss_dssp             HHTTCCCCCCTTS
T ss_pred             HHcCCCCCCCCCC
Confidence            77653 3444443

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.50  E-value=1.1e-13  Score=81.60  Aligned_cols=79  Identities=18%  Similarity=0.276  Sum_probs=64.8

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhc---cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIIL---YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~---~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+||.|||.+.....   ....+||+.|++||++.   ...++.+.|+|++|++++++++|..||.+.+..+.+..
T Consensus       188 ~~~~~~kL~DfG~a~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~  264 (348)
T 1u5q_A          188 SEPGLVKLGDFGSASIMAP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH  264 (348)
T ss_dssp             ETTTEEEECCCTTCBSSSS---BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred             CCCCCEEEeeccCceecCC---CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence            4567899999999866543   34568999999999985   45678899999999999999999999998887777777


Q ss_pred             HHhCC
Q psy8825          79 ITDHS   83 (92)
Q Consensus        79 i~~~~   83 (92)
                      +....
T Consensus       265 ~~~~~  269 (348)
T 1u5q_A          265 IAQNE  269 (348)
T ss_dssp             HHHSC
T ss_pred             HHhcC
Confidence            76654

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.49  E-value=7.1e-14  Score=82.42  Aligned_cols=90  Identities=21%  Similarity=0.376  Sum_probs=67.4

Q ss_pred             CCCCccccCCCccccccCCC--CCCCCCCcCCcCccchhhcc--CCCCchhhHHhHHHHHHHHHhCCCCCCCC----CHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG--RGSNPRPSAYSILLFQIILY--QPYGKSVDWWAYGVLLYEMLVGQPPFDGE----DEE   73 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~--~~~~~~~g~~~~~~pe~~~~--~~~~~~~~~ws~g~~~~~~~~g~~p~~~~----~~~   73 (92)
                      +.++.+||.|||.+......  ......+||+.|++||++.+  ..++.+.|+|++|++++++++|..||...    ...
T Consensus       193 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~  272 (355)
T 1vzo_A          193 DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQA  272 (355)
T ss_dssp             CTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHH
T ss_pred             CCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHH
Confidence            56788999999998765432  23345689999999999875  34678899999999999999999999743    345


Q ss_pred             HHHHHHHhCCCcCCCCCC
Q psy8825          74 ELFAAITDHSVSYPKMAV   91 (92)
Q Consensus        74 ~~~~~i~~~~~~~p~~~~   91 (92)
                      .+...+....+.+|..++
T Consensus       273 ~~~~~~~~~~~~~~~~~~  290 (355)
T 1vzo_A          273 EISRRILKSEPPYPQEMS  290 (355)
T ss_dssp             HHHHHHHHCCCCCCTTSC
T ss_pred             HHHHHHhccCCCCCcccC
Confidence            566667777777776554

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.49  E-value=1.1e-13  Score=82.05  Aligned_cols=78  Identities=21%  Similarity=0.302  Sum_probs=61.3

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+.....  .....+||+.|++||.+.+ ..++.+.|+|++|++++++++|..||.+.+..+.+..+.
T Consensus       178 ~~~~~~kL~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  255 (371)
T 4exu_A          178 NEDCELKILDFGLARHADA--EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL  255 (371)
T ss_dssp             CTTCCEEECSTTCC----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             CCCCCEEEEecCccccccc--CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            5678899999999865432  3445688999999999876 567889999999999999999999999988877776665


Q ss_pred             h
Q psy8825          81 D   81 (92)
Q Consensus        81 ~   81 (92)
                      .
T Consensus       256 ~  256 (371)
T 4exu_A          256 K  256 (371)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.49  E-value=8.3e-14  Score=79.96  Aligned_cols=80  Identities=15%  Similarity=0.256  Sum_probs=63.8

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCC-CCchhhHHhHHHHHHHHHhCCCC-CCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQP-YGKSVDWWAYGVLLYEMLVGQPP-FDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~-~~~~~~~ws~g~~~~~~~~g~~p-~~~~~~~~~~~~   78 (92)
                      +.++.+||.|||.+...... .......||..|++||.+.+.. ++.+.|+|++|+++++++++..| |.+.+..+.+..
T Consensus       135 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~  214 (292)
T 3o0g_A          135 NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKR  214 (292)
T ss_dssp             CTTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHH
T ss_pred             cCCCCEEEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHH
Confidence            56788999999999776543 3445568999999999987665 78999999999999999986655 667777777776


Q ss_pred             HHh
Q psy8825          79 ITD   81 (92)
Q Consensus        79 i~~   81 (92)
                      +.+
T Consensus       215 i~~  217 (292)
T 3o0g_A          215 IFR  217 (292)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            655

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.49  E-value=5.8e-14  Score=81.99  Aligned_cols=89  Identities=24%  Similarity=0.464  Sum_probs=69.3

Q ss_pred             CCCCccccCCCccccccCCC---CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG---RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~---~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+||.|||.+......   .......++..|++||.+.+..++.+.|+|++|++++++++ |..||.+.+..+...
T Consensus       208 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~  287 (343)
T 1luf_A          208 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIY  287 (343)
T ss_dssp             CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH
T ss_pred             CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHH
Confidence            45678999999988665332   22334578889999999988889999999999999999998 999999998888888


Q ss_pred             HHHhCCC-cCCCCC
Q psy8825          78 AITDHSV-SYPKMA   90 (92)
Q Consensus        78 ~i~~~~~-~~p~~~   90 (92)
                      .+..... .+|..+
T Consensus       288 ~~~~~~~~~~~~~~  301 (343)
T 1luf_A          288 YVRDGNILACPENC  301 (343)
T ss_dssp             HHHTTCCCCCCTTC
T ss_pred             HHhCCCcCCCCCCC
Confidence            8777653 444443

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.49  E-value=8e-14  Score=83.35  Aligned_cols=70  Identities=20%  Similarity=0.356  Sum_probs=51.1

Q ss_pred             CCCccccCCCccccccCCC----CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCH
Q psy8825           3 ESQPFRERTLSHQDKIRPG----RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDE   72 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~----~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~   72 (92)
                      .++.+||.|||.+......    ......+||+.|+|||++.+. .++.+.|+|++|++++++++|..||.+...
T Consensus       167 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~  241 (405)
T 3rgf_A          167 ERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE  241 (405)
T ss_dssp             TTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC-
T ss_pred             CCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccc
Confidence            4578999999999766432    234557899999999998774 478999999999999999999999986543

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.48  E-value=9.6e-14  Score=79.53  Aligned_cols=82  Identities=18%  Similarity=0.383  Sum_probs=68.6

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHS   83 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~   83 (92)
                      +..+||.|||.+.............|+..|++||.+.+. ++.+.|+|++|++++++++|..||.+.+..+....+..+.
T Consensus       160 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~  238 (287)
T 2wei_A          160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGK  238 (287)
T ss_dssp             TCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC
T ss_pred             cccEEEeccCcceeecCCCccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC
Confidence            457899999998777655555556789999999998654 7889999999999999999999999998888888888776


Q ss_pred             CcC
Q psy8825          84 VSY   86 (92)
Q Consensus        84 ~~~   86 (92)
                      +.+
T Consensus       239 ~~~  241 (287)
T 2wei_A          239 YAF  241 (287)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            544

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.48  E-value=3.9e-14  Score=81.25  Aligned_cols=68  Identities=15%  Similarity=0.113  Sum_probs=57.5

Q ss_pred             CCCccccCCCccccccCCCCC--------CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           3 ESQPFRERTLSHQDKIRPGRG--------SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~--------~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      .++.+||.|||.+........        .....|+..|++||.+.+..++.+.|+|++|++++++++|..||.+.
T Consensus       143 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  218 (296)
T 3uzp_A          143 KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL  218 (296)
T ss_dssp             GTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             CCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCc
Confidence            567899999999876644322        34568999999999998888999999999999999999999999763

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.48  E-value=1.7e-14  Score=82.18  Aligned_cols=89  Identities=15%  Similarity=0.310  Sum_probs=45.0

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+...... .......|++.|++||.+....++.+.|+|++|++++++++|..||........+.++.
T Consensus       146 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  225 (278)
T 3cok_A          146 TRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV  225 (278)
T ss_dssp             CTTCCEEECCCTTCEECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CC
T ss_pred             cCCCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHh
Confidence            45678999999998766433 33445689999999999988778889999999999999999999998765555555555


Q ss_pred             hCCCcCCCCC
Q psy8825          81 DHSVSYPKMA   90 (92)
Q Consensus        81 ~~~~~~p~~~   90 (92)
                      ...+.+|..+
T Consensus       226 ~~~~~~~~~~  235 (278)
T 3cok_A          226 LADYEMPSFL  235 (278)
T ss_dssp             SSCCCCCTTS
T ss_pred             hcccCCcccc
Confidence            5555555443

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.48  E-value=1.1e-13  Score=80.67  Aligned_cols=79  Identities=22%  Similarity=0.367  Sum_probs=59.2

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+||.|||.+...... ......+|+..|++||.+.+. .++.+.|+|++|++++++++|..||.+.+..+.+..+
T Consensus       158 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~  237 (331)
T 4aaa_A          158 SQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHI  237 (331)
T ss_dssp             CTTSCEEECCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             cCCCcEEEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Confidence            46778999999998766443 344556899999999998765 6788999999999999999999999998877666555


Q ss_pred             H
Q psy8825          80 T   80 (92)
Q Consensus        80 ~   80 (92)
                      .
T Consensus       238 ~  238 (331)
T 4aaa_A          238 M  238 (331)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.48  E-value=1.1e-13  Score=80.82  Aligned_cols=89  Identities=11%  Similarity=0.300  Sum_probs=67.3

Q ss_pred             CCCCccccCCCccccccCCCC----CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR----GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~----~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~   76 (92)
                      +.++.+||.|||.+.......    ......++..|++||.+.+..++.+.|+|++|++++++++ |..||.+....+..
T Consensus       185 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~  264 (325)
T 3kul_A          185 DSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI  264 (325)
T ss_dssp             CTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHH
T ss_pred             CCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHH
Confidence            567889999999987764432    1222345778999999988888999999999999999998 99999998888888


Q ss_pred             HHHHhCC-CcCCCCC
Q psy8825          77 AAITDHS-VSYPKMA   90 (92)
Q Consensus        77 ~~i~~~~-~~~p~~~   90 (92)
                      ..+.... .+.|..+
T Consensus       265 ~~~~~~~~~~~~~~~  279 (325)
T 3kul_A          265 SSVEEGYRLPAPMGC  279 (325)
T ss_dssp             HHHHTTCCCCCCTTC
T ss_pred             HHHHcCCCCCCCCCc
Confidence            7777653 3444433

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.48  E-value=1.8e-13  Score=77.66  Aligned_cols=80  Identities=23%  Similarity=0.420  Sum_probs=59.3

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHS   83 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~   83 (92)
                      ++.+|+.|||.+....... .....|++.|++||.+.+..++.+.|+|++|++++++++|..||.+.+.......+....
T Consensus       152 ~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~  230 (271)
T 3dtc_A          152 NKILKITDFGLAREWHRTT-KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNK  230 (271)
T ss_dssp             SCCEEECCCCC--------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSC
T ss_pred             CcceEEccCCccccccccc-ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCC
Confidence            5679999999987654332 335678999999999988889999999999999999999999999988777766666654


Q ss_pred             C
Q psy8825          84 V   84 (92)
Q Consensus        84 ~   84 (92)
                      .
T Consensus       231 ~  231 (271)
T 3dtc_A          231 L  231 (271)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.48  E-value=5.8e-14  Score=81.75  Aligned_cols=81  Identities=21%  Similarity=0.355  Sum_probs=64.3

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+.............++..|++||.+....++.+.|+|++|++++++++ |..||.+.+..+....+.
T Consensus       176 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~  255 (327)
T 1fvr_A          176 GENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP  255 (327)
T ss_dssp             CGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGG
T ss_pred             cCCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhh
Confidence            4567899999999865444344444567889999999988888899999999999999998 999999988887777776


Q ss_pred             hC
Q psy8825          81 DH   82 (92)
Q Consensus        81 ~~   82 (92)
                      ..
T Consensus       256 ~~  257 (327)
T 1fvr_A          256 QG  257 (327)
T ss_dssp             GT
T ss_pred             cC
Confidence            65

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.47  E-value=5.8e-14  Score=82.91  Aligned_cols=68  Identities=9%  Similarity=0.040  Sum_probs=56.9

Q ss_pred             CCCccccCCCccccccCCCC--------CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           3 ESQPFRERTLSHQDKIRPGR--------GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~--------~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      .++.+||.|||.+.......        .....+||+.|++||.+.+..++.+.|+|++|++++++++|..||.+.
T Consensus       189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~  264 (364)
T 3op5_A          189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN  264 (364)
T ss_dssp             CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred             CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence            56789999999986654321        124456999999999998888999999999999999999999999853

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.47  E-value=2.5e-13  Score=81.05  Aligned_cols=79  Identities=19%  Similarity=0.318  Sum_probs=58.3

Q ss_pred             CCccccCCCccccccCCCC---CCCCCCcCCcCccchhhcc-----------CCCCchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           4 SQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILY-----------QPYGKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~-----------~~~~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      ++.+||.|||.+.......   .....+||+.|+|||++..           ..++.+.|+|++|++++++++|..||.+
T Consensus       190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~  269 (390)
T 2zmd_A          190 DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ  269 (390)
T ss_dssp             SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchh
Confidence            4678999999997765432   2345689999999999865           3578899999999999999999999987


Q ss_pred             C-CHHHHHHHHHhC
Q psy8825          70 E-DEEELFAAITDH   82 (92)
Q Consensus        70 ~-~~~~~~~~i~~~   82 (92)
                      . +....+..+...
T Consensus       270 ~~~~~~~~~~~~~~  283 (390)
T 2zmd_A          270 IINQISKLHAIIDP  283 (390)
T ss_dssp             CCCHHHHHHHHHCT
T ss_pred             hhHHHHHHHHHhCc
Confidence            5 344455555544

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.47  E-value=6.6e-14  Score=87.67  Aligned_cols=89  Identities=17%  Similarity=0.301  Sum_probs=66.6

Q ss_pred             CCCCccccCCCccccccCCCCC----CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG----SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~----~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~   76 (92)
                      +.++.+||+|||.+........    .....++..|+|||++....++.+.|+|++|++++++++ |..||.+.+..++.
T Consensus       470 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~  549 (613)
T 2ozo_A          470 VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM  549 (613)
T ss_dssp             EETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHH
T ss_pred             cCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence            3567899999999977644322    122345678999999988889999999999999999998 99999998888888


Q ss_pred             HHHHhCC-CcCCCCC
Q psy8825          77 AAITDHS-VSYPKMA   90 (92)
Q Consensus        77 ~~i~~~~-~~~p~~~   90 (92)
                      ..+..+. ..+|..+
T Consensus       550 ~~i~~~~~~~~p~~~  564 (613)
T 2ozo_A          550 AFIEQGKRMECPPEC  564 (613)
T ss_dssp             HHHHTTCCCCCCTTC
T ss_pred             HHHHcCCCCCCCCcC
Confidence            8887764 3455544

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.47  E-value=1.1e-13  Score=79.89  Aligned_cols=80  Identities=16%  Similarity=0.261  Sum_probs=58.8

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+||.|||.+...... ......+|+..|++||.+.+ ..++.+.|+|++|++++++++|..||.+.+..+....+
T Consensus       136 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~  215 (311)
T 4agu_A          136 TKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLI  215 (311)
T ss_dssp             CTTSCEEECCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             cCCCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            46788999999998776533 33455689999999999876 56789999999999999999999999998877666555


Q ss_pred             Hh
Q psy8825          80 TD   81 (92)
Q Consensus        80 ~~   81 (92)
                      ..
T Consensus       216 ~~  217 (311)
T 4agu_A          216 RK  217 (311)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.47  E-value=3.9e-14  Score=82.25  Aligned_cols=81  Identities=17%  Similarity=0.283  Sum_probs=64.0

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhc--------cCCCCchhhHHhHHHHHHHHHhCCCCCCCC----
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIIL--------YQPYGKSVDWWAYGVLLYEMLVGQPPFDGE----   70 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~--------~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~----   70 (92)
                      ..+.+||.|||.+............+||..|++||++.        ...++.+.|+|++|++++++++|..||...    
T Consensus       151 ~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  230 (319)
T 4euu_A          151 GQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR  230 (319)
T ss_dssp             SCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG
T ss_pred             CCceEEEccCCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc
Confidence            34568999999998877666667788999999999986        456788999999999999999999999643    


Q ss_pred             CHHHHHHHHHhCC
Q psy8825          71 DEEELFAAITDHS   83 (92)
Q Consensus        71 ~~~~~~~~i~~~~   83 (92)
                      ...+.+.++....
T Consensus       231 ~~~~~~~~~~~~~  243 (319)
T 4euu_A          231 RNKEVMYKIITGK  243 (319)
T ss_dssp             GCHHHHHHHHHHC
T ss_pred             hhHHHHHHHhcCC
Confidence            2345555555543

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.47  E-value=1.4e-13  Score=83.45  Aligned_cols=70  Identities=16%  Similarity=0.258  Sum_probs=50.7

Q ss_pred             CCCCccccCCCccccccCCCC----------------------------CCCCCCcCCcCccchhh-ccCCCCchhhHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGR----------------------------GSNPRPSAYSILLFQII-LYQPYGKSVDWWA   52 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~----------------------------~~~~~~g~~~~~~pe~~-~~~~~~~~~~~ws   52 (92)
                      +.++.+||+|||.+.......                            .....+||+.|+|||++ ....++.+.|+|+
T Consensus       190 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwS  269 (458)
T 3rp9_A          190 NQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWS  269 (458)
T ss_dssp             CTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHH
T ss_pred             CCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHH
Confidence            567899999999987664221                            23445889999999986 4566899999999


Q ss_pred             HHHHHHHHHh-----------CCCCCCCCC
Q psy8825          53 YGVLLYEMLV-----------GQPPFDGED   71 (92)
Q Consensus        53 ~g~~~~~~~~-----------g~~p~~~~~   71 (92)
                      +|++++++++           +.++|.+..
T Consensus       270 lG~il~elltg~~~~~~~~~~~~p~f~g~~  299 (458)
T 3rp9_A          270 IGCIFAELLNMIKENVAYHADRGPLFPGSS  299 (458)
T ss_dssp             HHHHHHHHHTTSTTTCSSGGGCCCSCC---
T ss_pred             HHHHHHHHHHhccccccccccccccCCCCc
Confidence            9999999998           667776643

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.47  E-value=4.7e-14  Score=83.29  Aligned_cols=80  Identities=21%  Similarity=0.283  Sum_probs=63.7

Q ss_pred             CCCCccccCCCccccccCCCC----CCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR----GSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~----~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~   76 (92)
                      +.++.+||.|||.+.......    .....+||+.|++||++.. ..++.+.|+|++|++++++++|..||.+.+..+.+
T Consensus       162 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  241 (364)
T 3qyz_A          162 NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL  241 (364)
T ss_dssp             CTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHH
T ss_pred             CCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHH
Confidence            467789999999987664332    2345689999999998654 45789999999999999999999999988776666


Q ss_pred             HHHHh
Q psy8825          77 AAITD   81 (92)
Q Consensus        77 ~~i~~   81 (92)
                      ..+..
T Consensus       242 ~~i~~  246 (364)
T 3qyz_A          242 NHILG  246 (364)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.47  E-value=1.9e-13  Score=77.64  Aligned_cols=81  Identities=19%  Similarity=0.401  Sum_probs=67.1

Q ss_pred             CCCCccccCCCccccccCCC--CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG--RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~--~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+|+.|||.+......  .......++..|++||.+....++.+.|+|++|++++++++ |..||.+....+....
T Consensus       140 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~  219 (269)
T 4hcu_A          140 GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED  219 (269)
T ss_dssp             CGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH
T ss_pred             cCCCCEEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Confidence            45678999999998766443  23344567788999999988889999999999999999999 9999999888888877


Q ss_pred             HHhC
Q psy8825          79 ITDH   82 (92)
Q Consensus        79 i~~~   82 (92)
                      +...
T Consensus       220 ~~~~  223 (269)
T 4hcu_A          220 ISTG  223 (269)
T ss_dssp             HHTT
T ss_pred             HhcC
Confidence            7776

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.47  E-value=5.3e-14  Score=82.47  Aligned_cols=68  Identities=18%  Similarity=0.362  Sum_probs=59.3

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCC-CchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      +.++.+||.|||.+..........+.+||+.|++||++.+..+ +.+.|+|++|++++++++|..||..
T Consensus       164 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  232 (335)
T 3dls_A          164 AEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE  232 (335)
T ss_dssp             CTTSCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred             cCCCcEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh
Confidence            4678899999999987766666667789999999999987776 7889999999999999999999965

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.46  E-value=3.5e-13  Score=77.65  Aligned_cols=82  Identities=15%  Similarity=0.240  Sum_probs=67.8

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+...... .......|+..|++||.+.+..++.+.|+|++|++++++++|..||...........+.
T Consensus       153 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  232 (303)
T 3a7i_A          153 SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP  232 (303)
T ss_dssp             CTTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH
T ss_pred             CCCCCEEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhh
Confidence            46778999999998766443 34456789999999999988888899999999999999999999999888777766666


Q ss_pred             hCC
Q psy8825          81 DHS   83 (92)
Q Consensus        81 ~~~   83 (92)
                      ...
T Consensus       233 ~~~  235 (303)
T 3a7i_A          233 KNN  235 (303)
T ss_dssp             HSC
T ss_pred             cCC
Confidence            543

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.46  E-value=1.6e-13  Score=80.36  Aligned_cols=85  Identities=20%  Similarity=0.394  Sum_probs=69.7

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccC-CCCc-hhhHHhHHHHHHHHHhCCCCCCCCCH-HHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQ-PYGK-SVDWWAYGVLLYEMLVGQPPFDGEDE-EELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~-~~~~ws~g~~~~~~~~g~~p~~~~~~-~~~~~~   78 (92)
                      +.++.+||.|||.+...... ......|+..|++||.+.+. .+.. +.|+|++|++++++++|..||.+... .+....
T Consensus       186 ~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~  264 (348)
T 2pml_X          186 DKNGRVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNN  264 (348)
T ss_dssp             CTTSCEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHH
T ss_pred             cCCCcEEEeccccccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Confidence            46778999999998765333 44556899999999998876 5655 89999999999999999999988766 777888


Q ss_pred             HHhCCCcCC
Q psy8825          79 ITDHSVSYP   87 (92)
Q Consensus        79 i~~~~~~~p   87 (92)
                      +....+.+|
T Consensus       265 i~~~~~~~~  273 (348)
T 2pml_X          265 IRTKNIEYP  273 (348)
T ss_dssp             HTSCCCCCC
T ss_pred             HhccCcCCc
Confidence            888777776

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.46  E-value=1.5e-13  Score=84.81  Aligned_cols=89  Identities=18%  Similarity=0.322  Sum_probs=69.8

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      ++++.+||.|||.+.......  ......++..|++||.+....++.+.|+|++|++++++++ |..||.+....+++..
T Consensus       397 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~  476 (535)
T 2h8h_A          397 GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ  476 (535)
T ss_dssp             CGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHH
T ss_pred             cCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            566789999999987664321  2233456778999999988889999999999999999999 8999999988888887


Q ss_pred             HHhCC-CcCCCCC
Q psy8825          79 ITDHS-VSYPKMA   90 (92)
Q Consensus        79 i~~~~-~~~p~~~   90 (92)
                      +..+. .+.|..+
T Consensus       477 i~~~~~~~~~~~~  489 (535)
T 2h8h_A          477 VERGYRMPCPPEC  489 (535)
T ss_dssp             HHTTCCCCCCTTC
T ss_pred             HHcCCCCCCCCCC
Confidence            77653 3444443

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.46  E-value=1.8e-13  Score=81.08  Aligned_cols=86  Identities=17%  Similarity=0.313  Sum_probs=67.9

Q ss_pred             CCccccCCCccccccCCC---CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q psy8825           4 SQPFRERTLSHQDKIRPG---RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAI   79 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~---~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~i   79 (92)
                      +..+||.|||.+......   ....+..||+.|++||.+.+..++.+.|+|++|++++++++ |..||.+.+..+....+
T Consensus       220 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i  299 (367)
T 3l9p_A          220 GRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV  299 (367)
T ss_dssp             TCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred             CceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            345899999998654221   23334567889999999988889999999999999999998 99999999988888888


Q ss_pred             HhCC-CcCCCC
Q psy8825          80 TDHS-VSYPKM   89 (92)
Q Consensus        80 ~~~~-~~~p~~   89 (92)
                      ..+. ...|..
T Consensus       300 ~~~~~~~~~~~  310 (367)
T 3l9p_A          300 TSGGRMDPPKN  310 (367)
T ss_dssp             HTTCCCCCCTT
T ss_pred             HcCCCCCCCcc
Confidence            7765 333433

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.46  E-value=3.1e-14  Score=81.14  Aligned_cols=88  Identities=18%  Similarity=0.271  Sum_probs=68.2

Q ss_pred             CCCCccccCCCccccccCCCCC-CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG-SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~-~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+........ .....|+..|++||.+....++.+.|+|++|++++++++|..||.+.+..+....+.
T Consensus       150 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~  229 (279)
T 2w5a_A          150 DGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR  229 (279)
T ss_dssp             CSSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             cCCCCEEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHh
Confidence            4577899999998866543321 223468899999999988888999999999999999999999999988888888887


Q ss_pred             hCCC-cCCCC
Q psy8825          81 DHSV-SYPKM   89 (92)
Q Consensus        81 ~~~~-~~p~~   89 (92)
                      .+.. .+|..
T Consensus       230 ~~~~~~~~~~  239 (279)
T 2w5a_A          230 EGKFRRIPYR  239 (279)
T ss_dssp             HTCCCCCCTT
T ss_pred             hcccccCCcc
Confidence            7654 44443

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.46  E-value=2.7e-13  Score=78.89  Aligned_cols=73  Identities=23%  Similarity=0.373  Sum_probs=59.9

Q ss_pred             ccccCCCccccccCCCCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCC-CCCHHHHHHH
Q psy8825           6 PFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFD-GEDEEELFAA   78 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~-~~~~~~~~~~   78 (92)
                      .+||.|||.+............+|+..|++||.+.. ..++.+.|+|++|++++++++|..||. +.+..+.+..
T Consensus       169 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~  243 (330)
T 3nsz_A          169 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR  243 (330)
T ss_dssp             EEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHH
T ss_pred             EEEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHH
Confidence            789999999987766666777889999999999876 567899999999999999999999985 3444444433

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.46  E-value=1.3e-13  Score=81.81  Aligned_cols=89  Identities=16%  Similarity=0.349  Sum_probs=67.7

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+||+|||.+.......   ......++..|+|||.+....++.+.|+|++|++++++++ |..||.+....+...
T Consensus       247 ~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~  326 (377)
T 3cbl_A          247 TEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTRE  326 (377)
T ss_dssp             CTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHH
T ss_pred             cCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            567889999999987654332   1122335678999999988888999999999999999998 999999988877777


Q ss_pred             HHHhCC-CcCCCCC
Q psy8825          78 AITDHS-VSYPKMA   90 (92)
Q Consensus        78 ~i~~~~-~~~p~~~   90 (92)
                      .+..+. .+.|..+
T Consensus       327 ~~~~~~~~~~~~~~  340 (377)
T 3cbl_A          327 FVEKGGRLPCPELC  340 (377)
T ss_dssp             HHHTTCCCCCCTTC
T ss_pred             HHHcCCCCCCCCCC
Confidence            666643 4445443

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.45  E-value=3.7e-13  Score=76.97  Aligned_cols=80  Identities=10%  Similarity=0.182  Sum_probs=50.8

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhh----ccCCCCchhhHHhHHHHHHHHHhCCCCCCC-CCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQII----LYQPYGKSVDWWAYGVLLYEMLVGQPPFDG-EDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~----~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~-~~~~~~~   76 (92)
                      +.++.+||.|||.+.............|++.|++||.+    ....++.+.|+|++|++++++++|..||.. ......+
T Consensus       144 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~  223 (290)
T 3fme_A          144 NALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL  223 (290)
T ss_dssp             CTTCCEEBCCC---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHH
T ss_pred             CCCCCEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHH
Confidence            45678999999998777666555566899999999996    445678899999999999999999999986 3444444


Q ss_pred             HHHHh
Q psy8825          77 AAITD   81 (92)
Q Consensus        77 ~~i~~   81 (92)
                      ..+..
T Consensus       224 ~~~~~  228 (290)
T 3fme_A          224 KQVVE  228 (290)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            43333

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.45  E-value=1.1e-13  Score=83.28  Aligned_cols=68  Identities=22%  Similarity=0.407  Sum_probs=48.9

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc---CCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY---QPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~---~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      .+..+||.|||.+..........+.+||+.|+|||++..   ..++.+.|+|++|++++++++|..||.+.
T Consensus       277 ~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~  347 (419)
T 3i6u_A          277 EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH  347 (419)
T ss_dssp             SSCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred             CcceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence            344699999999987766666667899999999999753   55778999999999999999999999764

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.45  E-value=2.6e-13  Score=79.74  Aligned_cols=78  Identities=21%  Similarity=0.302  Sum_probs=60.3

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+.....  ......|++.|++||.+.. ..++.+.|+|++|++++++++|..||.+.+..+.+..+.
T Consensus       160 ~~~~~~kl~Dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~  237 (353)
T 3coi_A          160 NEDCELKILDFGLARHADA--EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL  237 (353)
T ss_dssp             CTTCCEEECSTTCTTC----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHH
T ss_pred             CCCCcEEEeecccccCCCC--CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            4677899999999865432  2345688999999999876 567889999999999999999999999988777666654


Q ss_pred             h
Q psy8825          81 D   81 (92)
Q Consensus        81 ~   81 (92)
                      +
T Consensus       238 ~  238 (353)
T 3coi_A          238 K  238 (353)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.45  E-value=5.9e-14  Score=80.20  Aligned_cols=89  Identities=15%  Similarity=0.344  Sum_probs=58.8

Q ss_pred             CCCCccccCCCccccccCCCCC--CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG--SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~--~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+||.|||.+........  .....+++.|++||.+....++.+.|+|++|++++++++ |..||.+.+..+....
T Consensus       150 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~  229 (281)
T 1mp8_A          150 SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR  229 (281)
T ss_dssp             EETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH
T ss_pred             CCCCCEEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHH
Confidence            3467899999999877654332  223456778999999988889999999999999999996 9999998877777777


Q ss_pred             HHhCC-CcCCCCC
Q psy8825          79 ITDHS-VSYPKMA   90 (92)
Q Consensus        79 i~~~~-~~~p~~~   90 (92)
                      +.... .++|..+
T Consensus       230 i~~~~~~~~~~~~  242 (281)
T 1mp8_A          230 IENGERLPMPPNC  242 (281)
T ss_dssp             HHTTCCCCCCTTC
T ss_pred             HHcCCCCCCCCCC
Confidence            76653 3444444

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.45  E-value=9.5e-14  Score=87.27  Aligned_cols=89  Identities=18%  Similarity=0.325  Sum_probs=67.5

Q ss_pred             CCCCccccCCCccccccCCCC----CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR----GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~----~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~   76 (92)
                      +.++.+||.|||.+..+....    ......++..|+|||++....++.+.|+|++|++++++++ |..||.+.+..++.
T Consensus       503 ~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~  582 (635)
T 4fl3_A          503 VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT  582 (635)
T ss_dssp             EETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH
T ss_pred             eCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            456789999999987765432    1223356788999999998889999999999999999998 99999999988888


Q ss_pred             HHHHhCC-CcCCCCC
Q psy8825          77 AAITDHS-VSYPKMA   90 (92)
Q Consensus        77 ~~i~~~~-~~~p~~~   90 (92)
                      ..+..+. ...|..+
T Consensus       583 ~~i~~~~~~~~p~~~  597 (635)
T 4fl3_A          583 AMLEKGERMGCPAGC  597 (635)
T ss_dssp             HHHHTTCCCCCCTTC
T ss_pred             HHHHcCCCCCCCCCC
Confidence            8887764 3445444

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.45  E-value=4.2e-13  Score=76.60  Aligned_cols=82  Identities=16%  Similarity=0.308  Sum_probs=67.3

Q ss_pred             CCCCccccCCCccccccCCC--CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG--RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~--~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+||.|||.+......  .......++..|++||.+.+..++.+.|+|++|++++++++ |..||...+..+....
T Consensus       154 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~  233 (283)
T 3gen_A          154 NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH  233 (283)
T ss_dssp             CTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH
T ss_pred             cCCCCEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHH
Confidence            46778999999998766443  22334456778999999988889999999999999999998 9999999888888877


Q ss_pred             HHhCC
Q psy8825          79 ITDHS   83 (92)
Q Consensus        79 i~~~~   83 (92)
                      +....
T Consensus       234 ~~~~~  238 (283)
T 3gen_A          234 IAQGL  238 (283)
T ss_dssp             HHTTC
T ss_pred             Hhccc
Confidence            77764

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.45  E-value=1.3e-13  Score=80.48  Aligned_cols=78  Identities=21%  Similarity=0.256  Sum_probs=58.9

Q ss_pred             CCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           4 SQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      ...+||.|||.+...... ......+||..|++||++.+. .++.+.|+|++|++++++++|..||.+.+..+.+..+.+
T Consensus       173 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~  252 (329)
T 3gbz_A          173 TPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFE  252 (329)
T ss_dssp             CCEEEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             cceEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHH
Confidence            445899999998776533 344556889999999998764 478999999999999999999999999888877777665

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.45  E-value=1.7e-13  Score=86.45  Aligned_cols=90  Identities=14%  Similarity=0.334  Sum_probs=68.5

Q ss_pred             CCCCccccCCCccccccCCCCC--CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG--SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~--~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+||.|||.+........  .....++..|+|||.+....++.+.|+|++|++++++++ |..||.+.+..+.+..
T Consensus       525 ~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~  604 (656)
T 2j0j_A          525 SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR  604 (656)
T ss_dssp             EETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH
T ss_pred             eCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence            3567899999999877654432  223456788999999988889999999999999999996 9999999988888888


Q ss_pred             HHhCC-CcCCCCCC
Q psy8825          79 ITDHS-VSYPKMAV   91 (92)
Q Consensus        79 i~~~~-~~~p~~~~   91 (92)
                      +.... .++|..++
T Consensus       605 i~~~~~~~~~~~~~  618 (656)
T 2j0j_A          605 IENGERLPMPPNCP  618 (656)
T ss_dssp             HHHTCCCCCCTTCC
T ss_pred             HHcCCCCCCCcccc
Confidence            87764 45555543

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.45  E-value=4.1e-13  Score=77.65  Aligned_cols=82  Identities=15%  Similarity=0.291  Sum_probs=54.8

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhc-----cCCCCchhhHHhHHHHHHHHHhCCCCCCC-CCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIIL-----YQPYGKSVDWWAYGVLLYEMLVGQPPFDG-EDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~-----~~~~~~~~~~ws~g~~~~~~~~g~~p~~~-~~~~~~   75 (92)
                      +.++.+||.|||.+.............|++.|++||.+.     ...++.+.|+|++|++++++++|..||.. ....+.
T Consensus       159 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~  238 (318)
T 2dyl_A          159 DERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV  238 (318)
T ss_dssp             CTTSCEEECCCTTC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH
T ss_pred             CCCCCEEEEECCCchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHH
Confidence            467789999999987766555555678999999999984     34577899999999999999999999987 455566


Q ss_pred             HHHHHhCC
Q psy8825          76 FAAITDHS   83 (92)
Q Consensus        76 ~~~i~~~~   83 (92)
                      +..+....
T Consensus       239 ~~~~~~~~  246 (318)
T 2dyl_A          239 LTKVLQEE  246 (318)
T ss_dssp             HHHHHHSC
T ss_pred             HHHHhccC
Confidence            66666554

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.45  E-value=2.1e-13  Score=79.19  Aligned_cols=88  Identities=20%  Similarity=0.382  Sum_probs=61.6

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+||.|||.+........   .....++..|++||.+.+..++.+.|+|++|++++++++ |..||.+.+..+...
T Consensus       171 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~  250 (323)
T 3qup_A          171 AEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYN  250 (323)
T ss_dssp             CTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH
T ss_pred             cCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHH
Confidence            4677899999999876644332   223456778999999988889999999999999999999 899999887777776


Q ss_pred             HHHhCC-CcCCCC
Q psy8825          78 AITDHS-VSYPKM   89 (92)
Q Consensus        78 ~i~~~~-~~~p~~   89 (92)
                      .+.... ...|..
T Consensus       251 ~~~~~~~~~~~~~  263 (323)
T 3qup_A          251 YLIGGNRLKQPPE  263 (323)
T ss_dssp             HHHTTCCCCCCTT
T ss_pred             HHhcCCCCCCCCc
Confidence            666653 344443

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.44  E-value=1.4e-13  Score=84.24  Aligned_cols=68  Identities=15%  Similarity=0.103  Sum_probs=57.9

Q ss_pred             CCCccccCCCccccccCCCCC--------CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           3 ESQPFRERTLSHQDKIRPGRG--------SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~--------~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      .++.+||.|||.+........        ....+||..|++||.+.+..++.+.|+|++|++++++++|..||.+.
T Consensus       141 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~  216 (483)
T 3sv0_A          141 RANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGL  216 (483)
T ss_dssp             GTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             CCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccc
Confidence            567899999999876654322        23668999999999999888999999999999999999999999874

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.44  E-value=1.3e-14  Score=85.99  Aligned_cols=68  Identities=15%  Similarity=0.140  Sum_probs=54.0

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccC-----------CCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQ-----------PYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-----------~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      +.++.+||.|||.+...  .......+| +.|++||++.+.           .++.+.|+|++|++++++++|..||.+.
T Consensus       240 ~~~~~~kL~DFG~a~~~--~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~  316 (377)
T 3byv_A          240 DQRGGVFLTGFEHLVRD--GARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKD  316 (377)
T ss_dssp             CTTCCEEECCGGGCEET--TCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             cCCCCEEEEechhheec--CCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCccc
Confidence            56788999999998753  234456678 999999999877           7899999999999999999999999765


Q ss_pred             CH
Q psy8825          71 DE   72 (92)
Q Consensus        71 ~~   72 (92)
                      ..
T Consensus       317 ~~  318 (377)
T 3byv_A          317 AA  318 (377)
T ss_dssp             --
T ss_pred             cc
Confidence            43

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.44  E-value=2.3e-13  Score=80.66  Aligned_cols=64  Identities=11%  Similarity=0.228  Sum_probs=55.1

Q ss_pred             ccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           6 PFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      .+||.|||.+.....  .....+||+.|++||++.+..++.+.|+|++|++++++++|..||.+.+
T Consensus       234 ~~kl~DfG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~  297 (397)
T 1wak_A          234 KVKIADLGNACWVHK--HFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHS  297 (397)
T ss_dssp             CEEECCGGGCEETTB--CSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred             ceEeccccccccccc--cCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCc
Confidence            689999999866543  3445689999999999988889999999999999999999999997654

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.44  E-value=1.4e-13  Score=79.82  Aligned_cols=67  Identities=10%  Similarity=0.171  Sum_probs=52.6

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      +.++.+||.|||.+.............||+.|++||++.+ .++.+.|+|++|++++++++|..++.+
T Consensus       191 ~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~  257 (311)
T 3p1a_A          191 GPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHG  257 (311)
T ss_dssp             CGGGCEEECCCTTCEECC------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSS
T ss_pred             CCCCCEEEccceeeeecccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            4677899999999877765555666789999999999875 688999999999999999999766554

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.44  E-value=1.6e-13  Score=78.57  Aligned_cols=88  Identities=17%  Similarity=0.317  Sum_probs=68.4

Q ss_pred             CCCccccCCCccccccCCCC----CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           3 ESQPFRERTLSHQDKIRPGR----GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~----~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      .++.+||.|||.+.......    ......++..|++||.+....++.+.|+|++|++++++++ |..||.+.+..+...
T Consensus       145 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~  224 (287)
T 1u59_A          145 NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA  224 (287)
T ss_dssp             ETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHH
T ss_pred             CCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHH
Confidence            46778999999987664332    1233456789999999988888899999999999999998 999999887777777


Q ss_pred             HHHhCC-CcCCCCC
Q psy8825          78 AITDHS-VSYPKMA   90 (92)
Q Consensus        78 ~i~~~~-~~~p~~~   90 (92)
                      .+.... ..+|..+
T Consensus       225 ~i~~~~~~~~~~~~  238 (287)
T 1u59_A          225 FIEQGKRMECPPEC  238 (287)
T ss_dssp             HHHTTCCCCCCTTC
T ss_pred             HHhcCCcCCCCCCc
Confidence            776654 4445444

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.44  E-value=2.9e-13  Score=76.76  Aligned_cols=83  Identities=16%  Similarity=0.293  Sum_probs=67.0

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+||.|||.+.......  ......++..|++||.+.+..++.+.|+|++|++++++++ |..||...+..+....
T Consensus       138 ~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~  217 (268)
T 3sxs_A          138 DRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLK  217 (268)
T ss_dssp             CTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH
T ss_pred             CCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHH
Confidence            467789999999987664442  2233456778999999988888889999999999999998 9999999888888777


Q ss_pred             HHhCCC
Q psy8825          79 ITDHSV   84 (92)
Q Consensus        79 i~~~~~   84 (92)
                      +.....
T Consensus       218 ~~~~~~  223 (268)
T 3sxs_A          218 VSQGHR  223 (268)
T ss_dssp             HHTTCC
T ss_pred             HHcCCC
Confidence            776653

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.44  E-value=1.4e-14  Score=86.93  Aligned_cols=68  Identities=9%  Similarity=0.051  Sum_probs=55.3

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhh----------ccCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQII----------LYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~----------~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      +.++.+||.|||.+......  ..+.+| +.|++||++          ....++.+.|+|++|++++++++|..||.+.+
T Consensus       245 ~~~~~~kL~DFG~a~~~~~~--~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~  321 (413)
T 3dzo_A          245 DQRGGVFLTGFEHLVRDGAS--AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDA  321 (413)
T ss_dssp             CTTCCEEECCGGGCEETTEE--ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTG
T ss_pred             ecCCeEEEEeccceeecCCc--cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcc
Confidence            56778999999998654332  456678 999999998          44457789999999999999999999998764


Q ss_pred             H
Q psy8825          72 E   72 (92)
Q Consensus        72 ~   72 (92)
                      .
T Consensus       322 ~  322 (413)
T 3dzo_A          322 A  322 (413)
T ss_dssp             G
T ss_pred             h
Confidence            3

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.43  E-value=3e-13  Score=81.59  Aligned_cols=62  Identities=18%  Similarity=0.250  Sum_probs=47.3

Q ss_pred             CCCCccccCCCccccccCCCC-----------------------CCCCCCcCCcCccchhh-ccCCCCchhhHHhHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-----------------------GSNPRPSAYSILLFQII-LYQPYGKSVDWWAYGVLL   57 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-----------------------~~~~~~g~~~~~~pe~~-~~~~~~~~~~~ws~g~~~   57 (92)
                      +.++.+||.|||.+.......                       .....+||+.|+|||++ ....++.+.|+|++|+++
T Consensus       163 ~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il  242 (432)
T 3n9x_A          163 NQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIF  242 (432)
T ss_dssp             CTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHH
T ss_pred             CCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHH
Confidence            567889999999987764332                       23567899999999986 455689999999999999


Q ss_pred             HHHHhC
Q psy8825          58 YEMLVG   63 (92)
Q Consensus        58 ~~~~~g   63 (92)
                      +++++|
T Consensus       243 ~ell~g  248 (432)
T 3n9x_A          243 AELLNM  248 (432)
T ss_dssp             HHHHTT
T ss_pred             HHHHhc
Confidence            999973

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.43  E-value=6.7e-13  Score=76.74  Aligned_cols=81  Identities=15%  Similarity=0.197  Sum_probs=66.0

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+...... .......|+..|++||.+....++.+.|+|++|++++++++|..||...+.......+.
T Consensus       159 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  238 (314)
T 3com_A          159 NTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIP  238 (314)
T ss_dssp             CTTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH
T ss_pred             CCCCCEEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHh
Confidence            46778999999998765443 33455689999999999988888889999999999999999999999877766655555


Q ss_pred             hC
Q psy8825          81 DH   82 (92)
Q Consensus        81 ~~   82 (92)
                      ..
T Consensus       239 ~~  240 (314)
T 3com_A          239 TN  240 (314)
T ss_dssp             HS
T ss_pred             cC
Confidence            44

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.43  E-value=1.1e-13  Score=81.26  Aligned_cols=64  Identities=9%  Similarity=0.070  Sum_probs=54.2

Q ss_pred             ccccCCCccccccCCCC--------CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           6 PFRERTLSHQDKIRPGR--------GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~--------~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      .+||.|||.+.......        ......|+..|++||.+.+..++.+.|+|++|++++++++|..||.+
T Consensus       191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~  262 (345)
T 2v62_A          191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQ  262 (345)
T ss_dssp             SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGG
T ss_pred             cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            89999999987654321        12456899999999999888899999999999999999999999965

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.43  E-value=4.4e-13  Score=77.87  Aligned_cols=82  Identities=16%  Similarity=0.203  Sum_probs=58.2

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhc-----cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIIL-----YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~-----~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      +.++.+||.|||.+...... .......|++.|++||.+.     ...++.+.|+|++|++++++++|..||.+.+....
T Consensus       163 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  242 (326)
T 2x7f_A          163 TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA  242 (326)
T ss_dssp             CTTCCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred             cCCCCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH
Confidence            46778999999998765433 2344568999999999986     44578889999999999999999999998887777


Q ss_pred             HHHHHhCC
Q psy8825          76 FAAITDHS   83 (92)
Q Consensus        76 ~~~i~~~~   83 (92)
                      ...+....
T Consensus       243 ~~~~~~~~  250 (326)
T 2x7f_A          243 LFLIPRNP  250 (326)
T ss_dssp             HHHHHHSC
T ss_pred             HHHhhcCc
Confidence            66666543

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.43  E-value=1.5e-13  Score=80.28  Aligned_cols=81  Identities=19%  Similarity=0.386  Sum_probs=58.4

Q ss_pred             CCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           3 ESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      .++.+||.|||.+........   .....++..|++||.+.+..++.+.|+|++|++++++++ |..||.+.+..+....
T Consensus       152 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~  231 (327)
T 3lzb_A          152 TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI  231 (327)
T ss_dssp             ETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH
T ss_pred             CCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Confidence            467899999999877644322   223456778999999998889999999999999999999 9999998877666666


Q ss_pred             HHhCC
Q psy8825          79 ITDHS   83 (92)
Q Consensus        79 i~~~~   83 (92)
                      +....
T Consensus       232 ~~~~~  236 (327)
T 3lzb_A          232 LEKGE  236 (327)
T ss_dssp             HHTTC
T ss_pred             HHcCC
Confidence            65543

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.43  E-value=6.8e-13  Score=77.61  Aligned_cols=81  Identities=15%  Similarity=0.334  Sum_probs=60.0

Q ss_pred             CCCCccccCCCccccccCCCCC----CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG----SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~----~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~   76 (92)
                      +.++.+||.|||.+........    .....++..|++||.+....++.+.|+|++|++++++++ |..||.+....+..
T Consensus       181 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~  260 (333)
T 1mqb_A          181 NSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM  260 (333)
T ss_dssp             CTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred             CCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHH
Confidence            4677899999999876644321    122345778999999988889999999999999999998 99999988888887


Q ss_pred             HHHHhC
Q psy8825          77 AAITDH   82 (92)
Q Consensus        77 ~~i~~~   82 (92)
                      ..+...
T Consensus       261 ~~~~~~  266 (333)
T 1mqb_A          261 KAINDG  266 (333)
T ss_dssp             HHHHTT
T ss_pred             HHHHCC
Confidence            777665

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.43  E-value=2.3e-13  Score=78.06  Aligned_cols=81  Identities=16%  Similarity=0.346  Sum_probs=52.8

Q ss_pred             CCCCccccCCCccccccCC---CCCCCCCCcCCcCccchhhc---cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCH-HH
Q psy8825           2 GESQPFRERTLSHQDKIRP---GRGSNPRPSAYSILLFQIIL---YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE-EE   74 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~---~~~~~~~~g~~~~~~pe~~~---~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~-~~   74 (92)
                      +.++.+||.|||.+.....   ........|+..|++||.+.   ...++.+.|+|++|++++++++|..||.+... ..
T Consensus       154 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~  233 (289)
T 3og7_A          154 HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ  233 (289)
T ss_dssp             ETTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH
T ss_pred             CCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH
Confidence            4567899999998865543   22344567999999999986   45678899999999999999999999987544 34


Q ss_pred             HHHHHHhC
Q psy8825          75 LFAAITDH   82 (92)
Q Consensus        75 ~~~~i~~~   82 (92)
                      ....+...
T Consensus       234 ~~~~~~~~  241 (289)
T 3og7_A          234 IIEMVGRG  241 (289)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHhccc
Confidence            44444443

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.42  E-value=2.2e-13  Score=80.32  Aligned_cols=65  Identities=15%  Similarity=0.287  Sum_probs=53.0

Q ss_pred             CccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           5 QPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         5 ~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      ..+||.|||.+.....  .....+||+.|++||++.+..++.+.|+|++|++++++++|..||.+.+
T Consensus       175 ~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  239 (373)
T 1q8y_A          175 IQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDE  239 (373)
T ss_dssp             EEEEECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC----
T ss_pred             ceEEEcccccccccCC--CCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCc
Confidence            4789999999866543  2345689999999999988889999999999999999999999998654

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.42  E-value=7.6e-13  Score=75.42  Aligned_cols=81  Identities=16%  Similarity=0.318  Sum_probs=65.9

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+||.|||.+.......  ......++..|++||.+.+..++.+.|+|++|++++++++ |..||.+.+..+....
T Consensus       143 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~  222 (279)
T 1qpc_A          143 SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN  222 (279)
T ss_dssp             CTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH
T ss_pred             cCCCCEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHH
Confidence            466789999999987664432  2233456788999999988888899999999999999998 8999999888887777


Q ss_pred             HHhC
Q psy8825          79 ITDH   82 (92)
Q Consensus        79 i~~~   82 (92)
                      +...
T Consensus       223 ~~~~  226 (279)
T 1qpc_A          223 LERG  226 (279)
T ss_dssp             HHTT
T ss_pred             Hhcc
Confidence            7665

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.42  E-value=2.1e-13  Score=83.55  Aligned_cols=89  Identities=18%  Similarity=0.364  Sum_probs=67.7

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+||+|||.+.......  ......++..|++||++....++.+.|+|++|++++++++ |..||.+.+..++...
T Consensus       352 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~  431 (495)
T 1opk_A          352 GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL  431 (495)
T ss_dssp             CGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH
T ss_pred             CCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            567789999999987764432  2233456778999999988888999999999999999998 9999998877666666


Q ss_pred             HHhCC-CcCCCCC
Q psy8825          79 ITDHS-VSYPKMA   90 (92)
Q Consensus        79 i~~~~-~~~p~~~   90 (92)
                      +.... ...|..+
T Consensus       432 ~~~~~~~~~~~~~  444 (495)
T 1opk_A          432 LEKDYRMERPEGC  444 (495)
T ss_dssp             HHTTCCCCCCTTC
T ss_pred             HHcCCCCCCCCCC
Confidence            65542 3344433

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.42  E-value=3.4e-13  Score=77.24  Aligned_cols=69  Identities=14%  Similarity=0.108  Sum_probs=57.7

Q ss_pred             CCCCccccCCCccccccCCCC--------CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--------GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--------~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      +.++.+||.|||.+.......        ......|+..|++||.+.+..++.+.|+|++|++++++++|..||.+.
T Consensus       142 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  218 (296)
T 4hgt_A          142 KKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL  218 (296)
T ss_dssp             GGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             CCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCccc
Confidence            356789999999987664432        234568999999999999888999999999999999999999999764

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.42  E-value=4.8e-13  Score=78.43  Aligned_cols=79  Identities=18%  Similarity=0.288  Sum_probs=61.5

Q ss_pred             CCCCccccCCCccccccCCCC-----------CCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-----------GSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-----------~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      +.++.+||.|||.+.......           .....+||+.|++||++.. ..++.+.|+|++|++++++++|..||.+
T Consensus       146 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  225 (353)
T 2b9h_A          146 NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG  225 (353)
T ss_dssp             CTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCC
Confidence            467789999999987664321           1234578999999998754 5678999999999999999999999999


Q ss_pred             CCHHHHHHHHH
Q psy8825          70 EDEEELFAAIT   80 (92)
Q Consensus        70 ~~~~~~~~~i~   80 (92)
                      .+..+.+..+.
T Consensus       226 ~~~~~~~~~~~  236 (353)
T 2b9h_A          226 RDYRHQLLLIF  236 (353)
T ss_dssp             SSHHHHHHHHH
T ss_pred             CCcHHHHHHHH
Confidence            88766655554

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.42  E-value=1.3e-13  Score=80.40  Aligned_cols=81  Identities=19%  Similarity=0.380  Sum_probs=62.9

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+||.|||.+........   .....++..|++||.+.+..++.+.|+|++|++++++++ |..||.+.+..+...
T Consensus       151 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~  230 (327)
T 3poz_A          151 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS  230 (327)
T ss_dssp             EETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH
T ss_pred             CCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHH
Confidence            3467899999999877654432   223456779999999998889999999999999999999 999999877666665


Q ss_pred             HHHhC
Q psy8825          78 AITDH   82 (92)
Q Consensus        78 ~i~~~   82 (92)
                      .+...
T Consensus       231 ~~~~~  235 (327)
T 3poz_A          231 ILEKG  235 (327)
T ss_dssp             HHHTT
T ss_pred             HHHcC
Confidence            55554

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.41  E-value=7e-13  Score=77.43  Aligned_cols=82  Identities=20%  Similarity=0.384  Sum_probs=66.4

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+||.|||.+.......   ......++..|++||.+.+..++.+.|+|++|++++++++ |..||.+.+..+...
T Consensus       191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~  270 (334)
T 2pvf_A          191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK  270 (334)
T ss_dssp             CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH
T ss_pred             cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHH
Confidence            567889999999987664432   2233466788999999988888899999999999999998 999999988877777


Q ss_pred             HHHhCC
Q psy8825          78 AITDHS   83 (92)
Q Consensus        78 ~i~~~~   83 (92)
                      .+....
T Consensus       271 ~~~~~~  276 (334)
T 2pvf_A          271 LLKEGH  276 (334)
T ss_dssp             HHHHTC
T ss_pred             HHhcCC
Confidence            776653

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.41  E-value=2.8e-13  Score=77.50  Aligned_cols=83  Identities=16%  Similarity=0.318  Sum_probs=64.7

Q ss_pred             CCCccccCCCccccccCCCC----CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           3 ESQPFRERTLSHQDKIRPGR----GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~----~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      .++.+||.|||.+.......    ......++..|++||.+....++.+.|+|++|++++++++ |..||.+.+..+...
T Consensus       156 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~  235 (291)
T 1u46_A          156 TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH  235 (291)
T ss_dssp             ETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred             CCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHH
Confidence            46678999999987765432    2233467778999999988888899999999999999999 999999988888888


Q ss_pred             HHHhCCCc
Q psy8825          78 AITDHSVS   85 (92)
Q Consensus        78 ~i~~~~~~   85 (92)
                      .+......
T Consensus       236 ~~~~~~~~  243 (291)
T 1u46_A          236 KIDKEGER  243 (291)
T ss_dssp             HHHTSCCC
T ss_pred             HHHccCCC
Confidence            87766443

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.41  E-value=8e-13  Score=76.53  Aligned_cols=80  Identities=15%  Similarity=0.141  Sum_probs=52.4

Q ss_pred             CCCCccccCCCccccccCCC--CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG--RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~--~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+||.|||.+......  .......|+..|++||.+.+..++.+.|+|++|++++++++|..||.+.+.......+
T Consensus       168 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~  247 (309)
T 2h34_A          168 SADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHI  247 (309)
T ss_dssp             CTTSCEEECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHH
T ss_pred             cCCCCEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHh
Confidence            45778999999988665443  2334567999999999998888888999999999999999999999887655444444


Q ss_pred             Hh
Q psy8825          80 TD   81 (92)
Q Consensus        80 ~~   81 (92)
                      ..
T Consensus       248 ~~  249 (309)
T 2h34_A          248 NQ  249 (309)
T ss_dssp             HS
T ss_pred             cc
Confidence            33

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.41  E-value=1.6e-13  Score=80.65  Aligned_cols=89  Identities=18%  Similarity=0.348  Sum_probs=64.6

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHH-HHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEE-ELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~-~~~   76 (92)
                      +.++.+||.|||.+.......   ......||..|++||.+.+..++.+.|+|++|++++++++ |..||.+.... ...
T Consensus       227 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~  306 (359)
T 3vhe_A          227 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC  306 (359)
T ss_dssp             CGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH
T ss_pred             cCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHH
Confidence            456789999999987664332   2344578889999999988889999999999999999998 99999876533 333


Q ss_pred             HHHHhC-CCcCCCCC
Q psy8825          77 AAITDH-SVSYPKMA   90 (92)
Q Consensus        77 ~~i~~~-~~~~p~~~   90 (92)
                      ..+... ....|..+
T Consensus       307 ~~~~~~~~~~~~~~~  321 (359)
T 3vhe_A          307 RRLKEGTRMRAPDYT  321 (359)
T ss_dssp             HHHHHTCCCCCCTTC
T ss_pred             HHHHcCCCCCCCCCC
Confidence            333333 33444443

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.41  E-value=1e-12  Score=74.40  Aligned_cols=82  Identities=18%  Similarity=0.385  Sum_probs=66.6

Q ss_pred             CCCCccccCCCccccccCCC--CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG--RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~--~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+|+.|||.+......  .......++..|++||.+....++.+.|+|++|++++++++ |..||.+.+..+....
T Consensus       138 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~  217 (267)
T 3t9t_A          138 GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED  217 (267)
T ss_dssp             CGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH
T ss_pred             CCCCCEEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHH
Confidence            45678999999998765432  22334567788999999988888999999999999999999 8999999888888777


Q ss_pred             HHhCC
Q psy8825          79 ITDHS   83 (92)
Q Consensus        79 i~~~~   83 (92)
                      +....
T Consensus       218 i~~~~  222 (267)
T 3t9t_A          218 ISTGF  222 (267)
T ss_dssp             HHTTC
T ss_pred             HhcCC
Confidence            77653

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.40  E-value=4.7e-13  Score=76.30  Aligned_cols=79  Identities=11%  Similarity=0.275  Sum_probs=58.3

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+||.|||.+......  .....++..|++||.+....++.+.|+|++|++++++++ |..||...+..+....+.
T Consensus       151 ~~~~~~~l~Dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~  228 (278)
T 1byg_A          151 SEDNVAKVSDFGLTKEASST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE  228 (278)
T ss_dssp             CTTSCEEECCCCC--------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHT
T ss_pred             eCCCcEEEeecccccccccc--ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh
Confidence            46778999999988654332  233467889999999988889999999999999999998 999998877766666665


Q ss_pred             hC
Q psy8825          81 DH   82 (92)
Q Consensus        81 ~~   82 (92)
                      ..
T Consensus       229 ~~  230 (278)
T 1byg_A          229 KG  230 (278)
T ss_dssp             TT
T ss_pred             cC
Confidence            54

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.40  E-value=6.4e-13  Score=76.87  Aligned_cols=88  Identities=17%  Similarity=0.354  Sum_probs=61.4

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+||.|||.+.......   ......++..|++||.+....++.+.|+|++|++++++++ |..||.+....+...
T Consensus       181 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~  260 (313)
T 3brb_A          181 RDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYD  260 (313)
T ss_dssp             CTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred             cCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHH
Confidence            456789999999987664432   2223457788999999988889999999999999999999 889998877766666


Q ss_pred             HHHhCC-CcCCCC
Q psy8825          78 AITDHS-VSYPKM   89 (92)
Q Consensus        78 ~i~~~~-~~~p~~   89 (92)
                      .+.... ...|..
T Consensus       261 ~~~~~~~~~~~~~  273 (313)
T 3brb_A          261 YLLHGHRLKQPED  273 (313)
T ss_dssp             HHHTTCCCCCBTT
T ss_pred             HHHcCCCCCCCcc
Confidence            665543 334433

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.40  E-value=1.2e-12  Score=76.78  Aligned_cols=77  Identities=17%  Similarity=0.303  Sum_probs=54.1

Q ss_pred             CCccccCCCccccccCCCC---CCCCCCcCCcCccchhhcc-----------CCCCchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           4 SQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILY-----------QPYGKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~-----------~~~~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      ++.+||.|||.+.......   .....+||+.|++||++..           ..++.+.|+|++|++++++++|..||..
T Consensus       143 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  222 (343)
T 3dbq_A          143 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ  222 (343)
T ss_dssp             TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchh
Confidence            4568999999997765432   2345689999999999864           5578899999999999999999999986


Q ss_pred             C-CHHHHHHHHH
Q psy8825          70 E-DEEELFAAIT   80 (92)
Q Consensus        70 ~-~~~~~~~~i~   80 (92)
                      . +....+..+.
T Consensus       223 ~~~~~~~~~~~~  234 (343)
T 3dbq_A          223 IINQISKLHAII  234 (343)
T ss_dssp             CCSHHHHHHHHH
T ss_pred             hhhHHHHHHHHh
Confidence            4 3333344443

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.40  E-value=8.8e-14  Score=83.04  Aligned_cols=81  Identities=17%  Similarity=0.296  Sum_probs=63.7

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc--------CCCCchhhHHhHHHHHHHHHhCCCCCCC----CC
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY--------QPYGKSVDWWAYGVLLYEMLVGQPPFDG----ED   71 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~--------~~~~~~~~~ws~g~~~~~~~~g~~p~~~----~~   71 (92)
                      .+.+||.|||.+............+||..|++||.+..        ..++.+.|+|++|++++++++|..||..    ..
T Consensus       152 ~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~  231 (396)
T 4eut_A          152 QSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR  231 (396)
T ss_dssp             CEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTT
T ss_pred             ceeEEEecCCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccc
Confidence            44689999999987766666667889999999999764        3456789999999999999999999964    23


Q ss_pred             HHHHHHHHHhCCC
Q psy8825          72 EEELFAAITDHSV   84 (92)
Q Consensus        72 ~~~~~~~i~~~~~   84 (92)
                      ..+.+.++..+.+
T Consensus       232 ~~~~~~~~~~~~p  244 (396)
T 4eut_A          232 NKEVMYKIITGKP  244 (396)
T ss_dssp             CHHHHHHHHHSCC
T ss_pred             hHHHHHHHhcCCC
Confidence            3566666666543

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.40  E-value=2.9e-13  Score=78.95  Aligned_cols=71  Identities=20%  Similarity=0.370  Sum_probs=57.6

Q ss_pred             CCCCccccCCCccccccCCC---CCCCCCCcCCcCccchhhccCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCH
Q psy8825           2 GESQPFRERTLSHQDKIRPG---RGSNPRPSAYSILLFQIILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDE   72 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~---~~~~~~~g~~~~~~pe~~~~~~~-~~~~~~ws~g~~~~~~~~g~~p~~~~~~   72 (92)
                      +.++.+||.|||.+......   ......+||+.|++||++....+ +.+.|+|++|++++++++|..||.+...
T Consensus       139 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  213 (323)
T 3tki_A          139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD  213 (323)
T ss_dssp             CTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCT
T ss_pred             eCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCch
Confidence            46778999999998755322   23456789999999999987765 6789999999999999999999976543

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.40  E-value=4.3e-13  Score=77.95  Aligned_cols=72  Identities=21%  Similarity=0.278  Sum_probs=41.0

Q ss_pred             CCCCccccCCCccccccCCCCCC-------------CCCCcCCcCccchhh---ccCCCCchhhHHhHHHHHHHHHhCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGS-------------NPRPSAYSILLFQII---LYQPYGKSVDWWAYGVLLYEMLVGQP   65 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~-------------~~~~g~~~~~~pe~~---~~~~~~~~~~~ws~g~~~~~~~~g~~   65 (92)
                      +.++.+||.|||.+.........             ...+|++.|++||++   ....++.+.|+|++|++++++++|..
T Consensus       172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~  251 (337)
T 3ll6_A          172 SNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQH  251 (337)
T ss_dssp             CTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCC
Confidence            46678999999998776543221             145689999999998   45567889999999999999999999


Q ss_pred             CCCCCCHH
Q psy8825          66 PFDGEDEE   73 (92)
Q Consensus        66 p~~~~~~~   73 (92)
                      ||......
T Consensus       252 p~~~~~~~  259 (337)
T 3ll6_A          252 PFEDGAKL  259 (337)
T ss_dssp             CC------
T ss_pred             CCcchhHH
Confidence            99765443

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.39  E-value=7.9e-14  Score=82.51  Aligned_cols=67  Identities=10%  Similarity=0.111  Sum_probs=55.2

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc--CCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY--QPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~--~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      +.++.+||.|||.+......  .....+++.|++||++.+  ..++.+.|+|++|++++++++|..||.+.
T Consensus       228 ~~~~~~kL~DFG~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~  296 (371)
T 3q60_A          228 MPDGRLMLGDVSALWKVGTR--GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLV  296 (371)
T ss_dssp             CTTSCEEECCGGGEEETTCE--EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBC
T ss_pred             CCCCCEEEEecceeeecCCC--ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCc
Confidence            56788999999998765322  213456699999999976  56899999999999999999999999765

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.39  E-value=3.3e-13  Score=79.45  Aligned_cols=74  Identities=20%  Similarity=0.238  Sum_probs=59.1

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~   76 (92)
                      +.++.+||.|||.+..... .......|++.|++||++.+..++.+.|+|++|++++++++|..||...+..+..
T Consensus       166 ~~~~~~kl~Dfg~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~  239 (360)
T 3eqc_A          166 NSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE  239 (360)
T ss_dssp             CTTCCEEECCCCCCHHHHH-HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHH
T ss_pred             CCCCCEEEEECCCCccccc-ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            4677899999998865422 2334568999999999998888999999999999999999999999887765543

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.39  E-value=1e-12  Score=78.03  Aligned_cols=81  Identities=14%  Similarity=0.327  Sum_probs=54.9

Q ss_pred             CCCCccccCCCccccccCCCCC----CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG----SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~----~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~   76 (92)
                      +.++.+||.|||.+........    .....++..|++||.+.+..++.+.|+|++|++++++++ |..||.+....+..
T Consensus       181 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~  260 (373)
T 2qol_A          181 NSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI  260 (373)
T ss_dssp             CTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHH
T ss_pred             cCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            5677899999999877644321    112245678999999988889999999999999999997 99999998888777


Q ss_pred             HHHHhC
Q psy8825          77 AAITDH   82 (92)
Q Consensus        77 ~~i~~~   82 (92)
                      ..+...
T Consensus       261 ~~i~~~  266 (373)
T 2qol_A          261 KAVDEG  266 (373)
T ss_dssp             HHHHTT
T ss_pred             HHHHcC
Confidence            776654

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.38  E-value=7.2e-13  Score=76.03  Aligned_cols=88  Identities=18%  Similarity=0.341  Sum_probs=66.6

Q ss_pred             CCCccccCCCccccccCCCCC----CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           3 ESQPFRERTLSHQDKIRPGRG----SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~----~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      .++.+||.|||.+........    .....++..|++||.+.+..++.+.|+|++|++++++++ |..||.+.+..+...
T Consensus       152 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~  231 (291)
T 1xbb_A          152 TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA  231 (291)
T ss_dssp             ETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH
T ss_pred             CCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            466789999999876644322    222356788999999988888889999999999999998 999999988877777


Q ss_pred             HHHhCC-CcCCCCC
Q psy8825          78 AITDHS-VSYPKMA   90 (92)
Q Consensus        78 ~i~~~~-~~~p~~~   90 (92)
                      .+.... ..+|..+
T Consensus       232 ~~~~~~~~~~~~~~  245 (291)
T 1xbb_A          232 MLEKGERMGCPAGC  245 (291)
T ss_dssp             HHHTTCCCCCCTTC
T ss_pred             HHHcCCCCCCCCCC
Confidence            776653 3444433

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.38  E-value=6.8e-13  Score=76.62  Aligned_cols=82  Identities=18%  Similarity=0.393  Sum_probs=64.9

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+||.|||.+.......   ......++..|++||.+.+..++.+.|+|++|++++++++ |..||.+.+..+...
T Consensus       184 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~  263 (314)
T 2ivs_A          184 AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN  263 (314)
T ss_dssp             ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred             cCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            356789999999987664432   2334467788999999988888999999999999999999 999999887766666


Q ss_pred             HHHhCC
Q psy8825          78 AITDHS   83 (92)
Q Consensus        78 ~i~~~~   83 (92)
                      .+....
T Consensus       264 ~~~~~~  269 (314)
T 2ivs_A          264 LLKTGH  269 (314)
T ss_dssp             HHHTTC
T ss_pred             HhhcCC
Confidence            666543

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.38  E-value=5.2e-13  Score=79.36  Aligned_cols=82  Identities=15%  Similarity=0.332  Sum_probs=55.1

Q ss_pred             CCCCccccCCCccccccCCCC-----CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-----GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-----~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~   75 (92)
                      +.++.+||.|||.+.......     ......++..|++||.+....++.+.|+|++|++++++++ +.+||.+.+..+.
T Consensus       226 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~  305 (373)
T 3c1x_A          226 DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI  305 (373)
T ss_dssp             CTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH
T ss_pred             CCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH
Confidence            467789999999987654332     1223456788999999988889999999999999999999 7888887665555


Q ss_pred             HHHHHhCC
Q psy8825          76 FAAITDHS   83 (92)
Q Consensus        76 ~~~i~~~~   83 (92)
                      ...+..+.
T Consensus       306 ~~~~~~~~  313 (373)
T 3c1x_A          306 TVYLLQGR  313 (373)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHHcCC
Confidence            55555543

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.38  E-value=5.9e-13  Score=77.03  Aligned_cols=82  Identities=24%  Similarity=0.454  Sum_probs=57.3

Q ss_pred             ccccCCCccccccCCC--------CCCCCCCcCCcCccchhhcc-----CCCCchhhHHhHHHHHHHHHhCCCCCCCCC-
Q psy8825           6 PFRERTLSHQDKIRPG--------RGSNPRPSAYSILLFQIILY-----QPYGKSVDWWAYGVLLYEMLVGQPPFDGED-   71 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~--------~~~~~~~g~~~~~~pe~~~~-----~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~-   71 (92)
                      .+||.|||.+......        ......+||..|++||++..     ..++.+.|+|++|++++++++|..||.+.. 
T Consensus       152 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~  231 (316)
T 2ac3_A          152 PVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCG  231 (316)
T ss_dssp             SEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCC
T ss_pred             ceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccc
Confidence            4899999988665422        12234579999999999864     346778999999999999999999998753 


Q ss_pred             --------------HHHHHHHHHhCCCcCC
Q psy8825          72 --------------EEELFAAITDHSVSYP   87 (92)
Q Consensus        72 --------------~~~~~~~i~~~~~~~p   87 (92)
                                    .......+....+.+|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  261 (316)
T 2ac3_A          232 SDCGWDRGEACPACQNMLFESIQEGKYEFP  261 (316)
T ss_dssp             SCSCC----CCHHHHHHHHHHHHHCCCCCC
T ss_pred             ccccccccccchhHHHHHHHHHhccCcccC
Confidence                          2345666666666655

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.38  E-value=8.7e-13  Score=76.51  Aligned_cols=82  Identities=13%  Similarity=0.267  Sum_probs=66.2

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+||.|||.+.......   ......+++.|++||.+.+..++.+.|+|++|++++++++ |..||.+.+..+...
T Consensus       172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~  251 (322)
T 1p4o_A          172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR  251 (322)
T ss_dssp             CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHH
T ss_pred             cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHH
Confidence            467789999999986553322   2233467889999999988889999999999999999999 899999988887777


Q ss_pred             HHHhCC
Q psy8825          78 AITDHS   83 (92)
Q Consensus        78 ~i~~~~   83 (92)
                      .+....
T Consensus       252 ~~~~~~  257 (322)
T 1p4o_A          252 FVMEGG  257 (322)
T ss_dssp             HHHTTC
T ss_pred             HHHcCC
Confidence            776654

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.38  E-value=7.4e-13  Score=76.55  Aligned_cols=68  Identities=12%  Similarity=0.120  Sum_probs=54.8

Q ss_pred             CCCCccccCCCccccccCCCCC---------------CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---------------SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPP   66 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p   66 (92)
                      +.++.+||.|||.+........               ..+.+||+.|++||.+.+..++.+.|+|++|++++++++|..|
T Consensus       142 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~  221 (310)
T 3s95_A          142 RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNA  221 (310)
T ss_dssp             CTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCS
T ss_pred             CCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCC
Confidence            4677899999999876543321               1256899999999999988899999999999999999999887


Q ss_pred             CCC
Q psy8825          67 FDG   69 (92)
Q Consensus        67 ~~~   69 (92)
                      +..
T Consensus       222 ~~~  224 (310)
T 3s95_A          222 DPD  224 (310)
T ss_dssp             STT
T ss_pred             Ccc
Confidence            754

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.38  E-value=5e-13  Score=76.41  Aligned_cols=81  Identities=19%  Similarity=0.384  Sum_probs=64.0

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+||.|||.+.......  ......++..|++||.+.+..++.+.|+|++|++++++++ |..||.+.+.......
T Consensus       145 ~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~  224 (288)
T 3kfa_A          145 GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL  224 (288)
T ss_dssp             CGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH
T ss_pred             cCCCCEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            456789999999987664432  2233456778999999988889999999999999999999 9999988776666665


Q ss_pred             HHhC
Q psy8825          79 ITDH   82 (92)
Q Consensus        79 i~~~   82 (92)
                      +...
T Consensus       225 ~~~~  228 (288)
T 3kfa_A          225 LEKD  228 (288)
T ss_dssp             HHTT
T ss_pred             Hhcc
Confidence            5554

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.38  E-value=2.7e-13  Score=79.32  Aligned_cols=81  Identities=16%  Similarity=0.306  Sum_probs=61.7

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+||.|||.+........   .....|+..|++||.+....++.+.|+|++|++++++++ |..||.+......+.
T Consensus       206 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~  285 (344)
T 1rjb_A          206 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFY  285 (344)
T ss_dssp             ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH
T ss_pred             cCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHH
Confidence            3567899999999876643322   233457788999999988889999999999999999998 999998865444444


Q ss_pred             HHHhC
Q psy8825          78 AITDH   82 (92)
Q Consensus        78 ~i~~~   82 (92)
                      .+...
T Consensus       286 ~~~~~  290 (344)
T 1rjb_A          286 KLIQN  290 (344)
T ss_dssp             HHHHT
T ss_pred             HHHhc
Confidence            44443

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.38  E-value=1.9e-12  Score=74.77  Aligned_cols=80  Identities=23%  Similarity=0.319  Sum_probs=61.9

Q ss_pred             CCCccccCCCccccccCCC----CCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy8825           3 ESQPFRERTLSHQDKIRPG----RGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFA   77 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~----~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~   77 (92)
                      .++.+||.|||.+......    .......++..|++||.+.. ..++.+.|+|++|++++++++|..||.+.+..+.+.
T Consensus       156 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  235 (320)
T 2i6l_A          156 EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQ  235 (320)
T ss_dssp             TTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             CCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            3467899999998766432    12333467899999998765 567899999999999999999999999988877776


Q ss_pred             HHHhC
Q psy8825          78 AITDH   82 (92)
Q Consensus        78 ~i~~~   82 (92)
                      .+...
T Consensus       236 ~~~~~  240 (320)
T 2i6l_A          236 LILES  240 (320)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            66543

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.37  E-value=5.9e-13  Score=76.82  Aligned_cols=72  Identities=17%  Similarity=0.332  Sum_probs=58.1

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEE   73 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~   73 (92)
                      +.++.+||.|||.+........   .....++..|++||.+....++.+.|+|++|++++++++ |..||.+....
T Consensus       179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~  254 (313)
T 1t46_A          179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD  254 (313)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS
T ss_pred             cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch
Confidence            3567889999999876654432   233457788999999988889999999999999999998 99999876543

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.37  E-value=2e-12  Score=78.10  Aligned_cols=68  Identities=16%  Similarity=0.277  Sum_probs=50.6

Q ss_pred             CCccccCCCccccccCCCC-----CCCCCCcCCcCccchhhcc-------CCCCchhhHHhHHHHHHHHHh-CCCCCCCC
Q psy8825           4 SQPFRERTLSHQDKIRPGR-----GSNPRPSAYSILLFQIILY-------QPYGKSVDWWAYGVLLYEMLV-GQPPFDGE   70 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~-----~~~~~~g~~~~~~pe~~~~-------~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~   70 (92)
                      ...+||+|||.+.......     .....+||+.|+|||++.+       ..++.+.|+|++|++++++++ |..||.+.
T Consensus       164 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~  243 (434)
T 2rio_A          164 NLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK  243 (434)
T ss_dssp             SCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST
T ss_pred             ceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc
Confidence            3478999999987765432     2234689999999999865       457889999999999999998 89999765


Q ss_pred             C
Q psy8825          71 D   71 (92)
Q Consensus        71 ~   71 (92)
                      .
T Consensus       244 ~  244 (434)
T 2rio_A          244 Y  244 (434)
T ss_dssp             T
T ss_pred             h
Confidence            4

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.37  E-value=3.6e-13  Score=78.38  Aligned_cols=70  Identities=17%  Similarity=0.277  Sum_probs=38.5

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhh----ccCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQII----LYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~----~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      +.++.+||.|||.+.............|+..|++||.+    ....++.+.|+|++|++++++++|..||.+..
T Consensus       160 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  233 (327)
T 3aln_A          160 DRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWN  233 (327)
T ss_dssp             ETTTEEEECCCSSSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-
T ss_pred             cCCCCEEEccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcc
Confidence            45678999999998777555555556899999999998    34567889999999999999999999997643

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.37  E-value=1.1e-12  Score=74.83  Aligned_cols=87  Identities=13%  Similarity=0.289  Sum_probs=63.0

Q ss_pred             CCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q psy8825           3 ESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAI   79 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~i   79 (92)
                      .++.+||.|||.+.......  ......++..|++||.+....++.+.|+|++|++++++++ |..||......+....+
T Consensus       148 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~  227 (281)
T 3cc6_A          148 SPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL  227 (281)
T ss_dssp             ETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHH
T ss_pred             CCCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHH
Confidence            46678999999987664432  2334467788999999988889999999999999999998 99999876665555555


Q ss_pred             HhCC-CcCCCC
Q psy8825          80 TDHS-VSYPKM   89 (92)
Q Consensus        80 ~~~~-~~~p~~   89 (92)
                      .... .+.|..
T Consensus       228 ~~~~~~~~~~~  238 (281)
T 3cc6_A          228 EKGDRLPKPDL  238 (281)
T ss_dssp             HHTCCCCCCTT
T ss_pred             hcCCCCCCCCC
Confidence            5543 333433

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.37  E-value=2.2e-13  Score=79.27  Aligned_cols=69  Identities=13%  Similarity=0.148  Sum_probs=54.5

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccC-----CCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQ-----PYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~-----~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      +.++.+||.|||.+.......   .....+||+.|++||++.+.     .++.+.|+|++|++++++++|..||.+.
T Consensus       165 ~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~  241 (322)
T 3soc_A          165 KNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP  241 (322)
T ss_dssp             CTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSC
T ss_pred             CCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCC
Confidence            467789999999987665432   23346899999999998763     3445679999999999999999998753

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.37  E-value=2.4e-13  Score=80.86  Aligned_cols=79  Identities=13%  Similarity=0.119  Sum_probs=59.6

Q ss_pred             CCCCccccCCCccccccCCC--------CCCCCCCcCCcCccchhhcc--CCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPG--------RGSNPRPSAYSILLFQIILY--QPYGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~--------~~~~~~~g~~~~~~pe~~~~--~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      +.++.+|+.|||.+......        ......+||..|++||++..  ..++.+.|+|++|++++++++|..||.+.+
T Consensus       162 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  241 (389)
T 3gni_B          162 SVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP  241 (389)
T ss_dssp             CTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             cCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence            56788999999876543211        12233578999999999977  568899999999999999999999998866


Q ss_pred             HHHHHHHHH
Q psy8825          72 EEELFAAIT   80 (92)
Q Consensus        72 ~~~~~~~i~   80 (92)
                      ..+.+..+.
T Consensus       242 ~~~~~~~~~  250 (389)
T 3gni_B          242 ATQMLLEKL  250 (389)
T ss_dssp             STTHHHHC-
T ss_pred             HHHHHHHHh
Confidence            554444433

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.37  E-value=7.8e-13  Score=76.84  Aligned_cols=69  Identities=13%  Similarity=0.115  Sum_probs=56.6

Q ss_pred             CCCCccccCCCccccccCCC---CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPG---RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~---~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      +.++.+||.|||.+......   .......|+..|++||.+.+..++.+.|+|++|++++++++|..||.+.
T Consensus       173 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~  244 (321)
T 2qkw_B          173 DENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS  244 (321)
T ss_dssp             CTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCS
T ss_pred             CCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCccccc
Confidence            46778999999988654322   2234456899999999998888899999999999999999999998754

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.36  E-value=6.8e-13  Score=78.02  Aligned_cols=65  Identities=11%  Similarity=0.119  Sum_probs=55.0

Q ss_pred             ccccCCCccccccCCCC--------CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           6 PFRERTLSHQDKIRPGR--------GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~--------~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      .+||.|||.+.......        ......|++.|++||.+.+..++.+.|+|++|++++++++|..||.+.
T Consensus       199 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  271 (352)
T 2jii_A          199 QVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC  271 (352)
T ss_dssp             EEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred             eEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence            78999999987654321        223458999999999998888999999999999999999999999875

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.36  E-value=4.4e-12  Score=72.68  Aligned_cols=77  Identities=16%  Similarity=0.251  Sum_probs=59.1

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCC-HHHHHHHHHh
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED-EEELFAAITD   81 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~-~~~~~~~i~~   81 (92)
                      .++.+||.|||.+.... ........|++.|++||.+.. .++.+.|+|++|++++++++|..||.+.. .......+..
T Consensus       167 ~~~~~kl~Dfg~~~~~~-~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~  244 (290)
T 1t4h_A          167 PTGSVKIGDLGLATLKR-ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS  244 (290)
T ss_dssp             TTSCEEECCTTGGGGCC-TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT
T ss_pred             CCCCEEEeeCCCccccc-ccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhc
Confidence            56789999999985443 233445679999999998764 58889999999999999999999998744 3444444443

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.36  E-value=2.2e-12  Score=74.12  Aligned_cols=83  Identities=14%  Similarity=0.320  Sum_probs=62.9

Q ss_pred             CCCCccccCCCccccccCCCC-----CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-----GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-----~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~   75 (92)
                      +.++.+|+.|||.+.......     ......+++.|++||.+.+..++.+.|+|++|++++++++ +.+||.+.+..+.
T Consensus       162 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~  241 (298)
T 3f66_A          162 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI  241 (298)
T ss_dssp             CTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTH
T ss_pred             CCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHH
Confidence            467789999999987654322     2334467788999999988889999999999999999999 6778877766666


Q ss_pred             HHHHHhCCC
Q psy8825          76 FAAITDHSV   84 (92)
Q Consensus        76 ~~~i~~~~~   84 (92)
                      ...+.....
T Consensus       242 ~~~~~~~~~  250 (298)
T 3f66_A          242 TVYLLQGRR  250 (298)
T ss_dssp             HHHHHTTCC
T ss_pred             HHHHhcCCC
Confidence            666665543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.35  E-value=3.2e-12  Score=72.35  Aligned_cols=85  Identities=20%  Similarity=0.253  Sum_probs=61.5

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCC---chhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYG---KSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~---~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~   78 (92)
                      +.++..++.+++++...    ......||+.|++||.+.+..+.   .+.|+|++|++++++++|..||.+.+..+....
T Consensus       147 ~~~~~~~l~~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~  222 (271)
T 3kmu_A          147 DEDMTARISMADVKFSF----QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMK  222 (271)
T ss_dssp             CTTSCEEEEGGGSCCTT----SCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHH
T ss_pred             cCCcceeEEeccceeee----cccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHH
Confidence            34566777776665332    22345789999999998765443   379999999999999999999999888777666


Q ss_pred             HHhCC--CcCCCCC
Q psy8825          79 ITDHS--VSYPKMA   90 (92)
Q Consensus        79 i~~~~--~~~p~~~   90 (92)
                      +....  +.+|..+
T Consensus       223 ~~~~~~~~~~~~~~  236 (271)
T 3kmu_A          223 VALEGLRPTIPPGI  236 (271)
T ss_dssp             HHHSCCCCCCCTTC
T ss_pred             HHhcCCCCCCCCCC
Confidence            66553  3444443

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.35  E-value=5.4e-12  Score=72.37  Aligned_cols=82  Identities=20%  Similarity=0.321  Sum_probs=63.0

Q ss_pred             CCCCccccCCCccccccCCC-----CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-----RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-----~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~   75 (92)
                      +.++.+||.|||.+......     .......++..|++||.+.+..++.+.|+|++|++++++++ +.+++...+..+.
T Consensus       158 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~  237 (298)
T 3pls_A          158 DESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDL  237 (298)
T ss_dssp             CTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGH
T ss_pred             cCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHH
Confidence            46678999999998755332     22334567889999999988889999999999999999999 5566666666666


Q ss_pred             HHHHHhCC
Q psy8825          76 FAAITDHS   83 (92)
Q Consensus        76 ~~~i~~~~   83 (92)
                      ...+....
T Consensus       238 ~~~~~~~~  245 (298)
T 3pls_A          238 THFLAQGR  245 (298)
T ss_dssp             HHHHHTTC
T ss_pred             HHHhhcCC
Confidence            66665543

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.34  E-value=4.1e-12  Score=73.40  Aligned_cols=82  Identities=21%  Similarity=0.238  Sum_probs=52.9

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC--CHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE--DEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~--~~~~~~~~   78 (92)
                      +.++.+||.|||.+...... .......|+..|++||.+....++.+.|+|++|++++++++|..||.+.  ........
T Consensus       170 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~  249 (310)
T 2wqm_A          170 TATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK  249 (310)
T ss_dssp             CTTSCEEECCC------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHH
T ss_pred             cCCCCEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHH
Confidence            45778999999998765443 2334567899999999998888899999999999999999999999764  33455555


Q ss_pred             HHhCC
Q psy8825          79 ITDHS   83 (92)
Q Consensus        79 i~~~~   83 (92)
                      +....
T Consensus       250 ~~~~~  254 (310)
T 2wqm_A          250 IEQCD  254 (310)
T ss_dssp             HHTTC
T ss_pred             hhccc
Confidence            55544

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.34  E-value=5.6e-13  Score=77.68  Aligned_cols=78  Identities=18%  Similarity=0.278  Sum_probs=59.5

Q ss_pred             CCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           3 ESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      .++.+||.|||.+.......   ......++..|++||.+....++.+.|+|++|++++++++ |..||.+.........
T Consensus       199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~  278 (333)
T 2i1m_A          199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK  278 (333)
T ss_dssp             GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHH
T ss_pred             CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHH
Confidence            45678999999987654332   1234457788999999988889999999999999999998 8899987654333333


Q ss_pred             HH
Q psy8825          79 IT   80 (92)
Q Consensus        79 i~   80 (92)
                      +.
T Consensus       279 ~~  280 (333)
T 2i1m_A          279 LV  280 (333)
T ss_dssp             HH
T ss_pred             HH
Confidence            33

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.34  E-value=6e-13  Score=77.36  Aligned_cols=67  Identities=16%  Similarity=0.209  Sum_probs=56.2

Q ss_pred             CCCCccccCCCccccccCCC--CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPG--RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFD   68 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~--~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~   68 (92)
                      +.++.+||.|||.+......  .......||+.|++||.+.+..++.+.|+|++|++++++++|..||.
T Consensus       168 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  236 (326)
T 3uim_A          168 DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD  236 (326)
T ss_dssp             CTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred             CCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccc
Confidence            45678999999998766433  23444579999999999988888999999999999999999999985

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.34  E-value=1.7e-12  Score=75.37  Aligned_cols=66  Identities=12%  Similarity=0.157  Sum_probs=53.8

Q ss_pred             CCCCccccCCCccccccCCCC-------------CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-------------GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPF   67 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-------------~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~   67 (92)
                      +.++.+||.|||.+.......             .....+||+.|++||.+.+..++.+.|+|++|++++++++|..++
T Consensus       198 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~  276 (332)
T 3qd2_B          198 TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQ  276 (332)
T ss_dssp             CTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCH
T ss_pred             eCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCCh
Confidence            467789999999987765442             234467999999999998888999999999999999999986654

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.33  E-value=7e-12  Score=72.56  Aligned_cols=66  Identities=14%  Similarity=0.305  Sum_probs=48.3

Q ss_pred             CCCc-cccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           3 ESQP-FRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         3 ~~~~-~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      .++. +||.|||.+......  .....|+..|++||.+.+..++.+.|+|++|++++++++|..||...
T Consensus       140 ~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  206 (307)
T 2eva_A          140 AGGTVLKICDFGTACDIQTH--MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI  206 (307)
T ss_dssp             TTTTEEEECCCCC--------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTT
T ss_pred             CCCCEEEEcccccccccccc--cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhh
Confidence            3444 799999998654332  23457899999999998888899999999999999999999999753

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.33  E-value=5e-13  Score=78.27  Aligned_cols=68  Identities=19%  Similarity=0.360  Sum_probs=36.9

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCH
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE   72 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~   72 (92)
                      ++.+||.|||.+..... ......+|++.|++||.+....++.+.|+|++|++++++++|..||.+...
T Consensus       167 ~~~~kl~Dfg~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~  234 (336)
T 3fhr_A          167 DAVLKLTDFGFAKETTQ-NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG  234 (336)
T ss_dssp             TCCEEECCCTTCEEC-----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred             CceEEEeccccceeccc-cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccc
Confidence            55699999999866543 334456889999999999877788899999999999999999999976544

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.33  E-value=1.1e-12  Score=75.76  Aligned_cols=88  Identities=19%  Similarity=0.353  Sum_probs=64.0

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCH-HHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDE-EELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~-~~~~   76 (92)
                      +.++.+||.|||.+.......   ......|+..|++||.+....++.+.|+|++|++++++++ |..||.+... ....
T Consensus       182 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~  261 (316)
T 2xir_A          182 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC  261 (316)
T ss_dssp             CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHH
T ss_pred             CCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHH
Confidence            456789999999987664432   2234467889999999988889999999999999999998 9999987543 3333


Q ss_pred             HHHHhC-CCcCCCC
Q psy8825          77 AAITDH-SVSYPKM   89 (92)
Q Consensus        77 ~~i~~~-~~~~p~~   89 (92)
                      ..+... ....|..
T Consensus       262 ~~~~~~~~~~~~~~  275 (316)
T 2xir_A          262 RRLKEGTRMRAPDY  275 (316)
T ss_dssp             HHHHHTCCCCCCTT
T ss_pred             HHhccCccCCCCCC
Confidence            334433 2344443

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.32  E-value=3.3e-12  Score=73.02  Aligned_cols=63  Identities=16%  Similarity=0.315  Sum_probs=51.4

Q ss_pred             cccCCCccccccCCCCCCCCCCcCCcCccchhhc--cCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           7 FRERTLSHQDKIRPGRGSNPRPSAYSILLFQIIL--YQPYGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         7 ~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~--~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      +||.|||.+....  .......|++.|++||.+.  ...++.+.|+|++|++++++++|..||....
T Consensus       168 ~kl~Dfg~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~  232 (287)
T 4f0f_A          168 AKVADFGLSQQSV--HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS  232 (287)
T ss_dssp             EEECCCTTCBCCS--SCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             EEeCCCCcccccc--ccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccc
Confidence            8999999886433  2344568999999999984  3446789999999999999999999997654

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.32  E-value=1.9e-12  Score=75.38  Aligned_cols=80  Identities=15%  Similarity=0.285  Sum_probs=63.3

Q ss_pred             CCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q psy8825           4 SQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAI   79 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~i   79 (92)
                      ...+||.|||.+.......   ......|+..|++||.+....++.+.|+|++|++++++++ |..||.+....+....+
T Consensus       179 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~  258 (327)
T 2yfx_A          179 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV  258 (327)
T ss_dssp             TCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred             cceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHH
Confidence            4468999999876543221   2233467889999999988889999999999999999998 99999988888777777


Q ss_pred             HhCC
Q psy8825          80 TDHS   83 (92)
Q Consensus        80 ~~~~   83 (92)
                      ....
T Consensus       259 ~~~~  262 (327)
T 2yfx_A          259 TSGG  262 (327)
T ss_dssp             HTTC
T ss_pred             hcCC
Confidence            7653

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.32  E-value=1.5e-11  Score=71.21  Aligned_cols=80  Identities=16%  Similarity=0.134  Sum_probs=59.6

Q ss_pred             CCccccCCCccccccCCC------CCCCCCCcCCcCccchhhcc---------CCCCchhhHHhHHHHHHHHHhCCCCCC
Q psy8825           4 SQPFRERTLSHQDKIRPG------RGSNPRPSAYSILLFQIILY---------QPYGKSVDWWAYGVLLYEMLVGQPPFD   68 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~------~~~~~~~g~~~~~~pe~~~~---------~~~~~~~~~ws~g~~~~~~~~g~~p~~   68 (92)
                      ++.+||.|||.+......      .......|+..|++||.+..         ..++.+.|+|++|++++++++|..||.
T Consensus       165 ~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~  244 (319)
T 2y4i_B          165 NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK  244 (319)
T ss_dssp             --CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSS
T ss_pred             CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            467899999987654321      22334568999999999864         346889999999999999999999999


Q ss_pred             CCCHHHHHHHHHhCC
Q psy8825          69 GEDEEELFAAITDHS   83 (92)
Q Consensus        69 ~~~~~~~~~~i~~~~   83 (92)
                      +.........+....
T Consensus       245 ~~~~~~~~~~~~~~~  259 (319)
T 2y4i_B          245 TQPAEAIIWQMGTGM  259 (319)
T ss_dssp             SCCHHHHHHHHHTTC
T ss_pred             CCCHHHHHHHhccCC
Confidence            988877777776654

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.32  E-value=1.3e-12  Score=74.52  Aligned_cols=66  Identities=18%  Similarity=0.222  Sum_probs=56.7

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCC
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFD   68 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~   68 (92)
                      .++.+||.|||.+.............|++.|++||.+.+..++.+.|+|++|+++++++++..|+.
T Consensus       157 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~  222 (284)
T 2a19_B          157 DTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF  222 (284)
T ss_dssp             ETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred             CCCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcch
Confidence            456789999999877766555566789999999999988888999999999999999999887764

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.32  E-value=2.5e-12  Score=73.84  Aligned_cols=68  Identities=24%  Similarity=0.356  Sum_probs=53.5

Q ss_pred             CCCCccccCCCccccccCCCC-----CCCCCCcCCcCccchhhccC------CCCchhhHHhHHHHHHHHHhC-------
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-----GSNPRPSAYSILLFQIILYQ------PYGKSVDWWAYGVLLYEMLVG-------   63 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-----~~~~~~g~~~~~~pe~~~~~------~~~~~~~~ws~g~~~~~~~~g-------   63 (92)
                      +.++.+||.|||.+.......     .....+||+.|++||.+.+.      .++.+.|+|++|++++++++|       
T Consensus       147 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~  226 (301)
T 3q4u_A          147 KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV  226 (301)
T ss_dssp             CTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred             cCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccc
Confidence            467789999999986554332     23445899999999998765      334689999999999999999       


Q ss_pred             ---CCCCCC
Q psy8825          64 ---QPPFDG   69 (92)
Q Consensus        64 ---~~p~~~   69 (92)
                         ..||..
T Consensus       227 ~~~~~pf~~  235 (301)
T 3q4u_A          227 EDYKPPFYD  235 (301)
T ss_dssp             CCCCCTTTT
T ss_pred             ccccccccc
Confidence               788854

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.31  E-value=5.3e-12  Score=76.35  Aligned_cols=66  Identities=15%  Similarity=0.208  Sum_probs=48.5

Q ss_pred             ccccCCCccccccCCC----CCCCCCCcCCcCccchhhcc---CCCCchhhHHhHHHHHHHHHh-CCCCCCCCC
Q psy8825           6 PFRERTLSHQDKIRPG----RGSNPRPSAYSILLFQIILY---QPYGKSVDWWAYGVLLYEMLV-GQPPFDGED   71 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~----~~~~~~~g~~~~~~pe~~~~---~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~   71 (92)
                      .+||.|||.+......    ......+||+.|+|||++..   ..++.+.|+|++|++++++++ |..||....
T Consensus       161 ~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~  234 (432)
T 3p23_A          161 KAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSL  234 (432)
T ss_dssp             CEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTT
T ss_pred             eEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhh
Confidence            3559999998776543    23445689999999999873   456778999999999999999 888986543

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.31  E-value=3.3e-12  Score=74.39  Aligned_cols=62  Identities=13%  Similarity=0.158  Sum_probs=48.0

Q ss_pred             CCCCccccCCCccccccCCCCC-----CCCCCcCCcCccchhhccCCCCch------hhHHhHHHHHHHHHhC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG-----SNPRPSAYSILLFQIILYQPYGKS------VDWWAYGVLLYEMLVG   63 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~-----~~~~~g~~~~~~pe~~~~~~~~~~------~~~ws~g~~~~~~~~g   63 (92)
                      +.++.+||.|||.+........     ....+||+.|++||.+.+......      .|+|++|++++++++|
T Consensus       176 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg  248 (337)
T 3mdy_A          176 KKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR  248 (337)
T ss_dssp             CTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhc
Confidence            4677899999999876644322     235689999999999876655443      8999999999999999

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.30  E-value=1.1e-12  Score=75.42  Aligned_cols=82  Identities=16%  Similarity=0.216  Sum_probs=60.9

Q ss_pred             CCCCccccCCCccccccCC-CCCCCCCCcCCcCccchhhc-----cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRP-GRGSNPRPSAYSILLFQIIL-----YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~-~~~~~~~~g~~~~~~pe~~~-----~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      +.++.+||.|||.+..... ........|+..|++||.+.     ...++.+.|+|++|++++++++|..||...+....
T Consensus       151 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  230 (302)
T 2j7t_A          151 TLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV  230 (302)
T ss_dssp             CTTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred             CCCCCEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH
Confidence            4577899999997643321 12234567899999999983     45678899999999999999999999998887777


Q ss_pred             HHHHHhCC
Q psy8825          76 FAAITDHS   83 (92)
Q Consensus        76 ~~~i~~~~   83 (92)
                      +..+....
T Consensus       231 ~~~~~~~~  238 (302)
T 2j7t_A          231 LLKIAKSD  238 (302)
T ss_dssp             HHHHHHSC
T ss_pred             HHHHhccC
Confidence            76666654

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.30  E-value=2.2e-12  Score=74.12  Aligned_cols=80  Identities=13%  Similarity=0.240  Sum_probs=57.6

Q ss_pred             CCCCccccCCCccccccCCCC------CCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR------GSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE   74 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~------~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~   74 (92)
                      +.++.+||.|||.+.......      ......|++.|++||.+.. ..++.+.|+|++|++++++++|..||.+.+...
T Consensus       155 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  234 (303)
T 2vwi_A          155 GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK  234 (303)
T ss_dssp             CTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG
T ss_pred             cCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh
Confidence            467789999999876554321      2334579999999999865 457889999999999999999999998876555


Q ss_pred             HHHHHHh
Q psy8825          75 LFAAITD   81 (92)
Q Consensus        75 ~~~~i~~   81 (92)
                      .......
T Consensus       235 ~~~~~~~  241 (303)
T 2vwi_A          235 VLMLTLQ  241 (303)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHhc
Confidence            4444443

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.29  E-value=6e-12  Score=73.20  Aligned_cols=67  Identities=21%  Similarity=0.407  Sum_probs=55.2

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCC-CchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      .++.+||.|||.+..... .......|++.|++||.+....+ +.+.|+|++|++++++++|..||...
T Consensus       185 ~~~~~kL~Dfg~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  252 (320)
T 3a99_A          185 NRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD  252 (320)
T ss_dssp             TTTEEEECCCTTCEECCS-SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH
T ss_pred             CCCCEEEeeCcccccccc-ccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh
Confidence            467899999999876643 33455689999999999877665 67789999999999999999999753

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.29  E-value=9.1e-13  Score=76.58  Aligned_cols=67  Identities=21%  Similarity=0.395  Sum_probs=53.7

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhc---cCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIIL---YQPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~---~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      +..+||.|||.+.............|+..|++||++.   ...++.+.|+|++|++++++++|..||.+.
T Consensus       153 ~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  222 (322)
T 2ycf_A          153 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH  222 (322)
T ss_dssp             SCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCST
T ss_pred             CCeEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence            3459999999987664443333457899999999974   456788999999999999999999999764

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.28  E-value=9.7e-12  Score=70.64  Aligned_cols=70  Identities=20%  Similarity=0.362  Sum_probs=56.6

Q ss_pred             CCCCccccCCCccccccCCC---CCCCCCCcCCcCccchhhccCCC-CchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPG---RGSNPRPSAYSILLFQIILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~---~~~~~~~g~~~~~~pe~~~~~~~-~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      +.++.+|+.|||.+......   ......+|+..|++||.+....+ +.+.|+|++|++++++++|..||.+..
T Consensus       139 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  212 (276)
T 2yex_A          139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS  212 (276)
T ss_dssp             CTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSC
T ss_pred             ccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCc
Confidence            45678999999988655322   23455689999999999877665 678999999999999999999997654

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.28  E-value=7.1e-13  Score=77.25  Aligned_cols=66  Identities=9%  Similarity=0.139  Sum_probs=50.1

Q ss_pred             CCCCccccCCCccccccCCC---------CCCCCCCcCCcCccchhhcc-------CCCCchhhHHhHHHHHHHHHhCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPG---------RGSNPRPSAYSILLFQIILY-------QPYGKSVDWWAYGVLLYEMLVGQP   65 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~---------~~~~~~~g~~~~~~pe~~~~-------~~~~~~~~~ws~g~~~~~~~~g~~   65 (92)
                      +.++.+||.|||.+......         ......+||..|++||++.+       ..++.+.|+|++|++++++++|..
T Consensus       154 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~  233 (336)
T 3g2f_A          154 KNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCT  233 (336)
T ss_dssp             CTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBG
T ss_pred             cCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCC
Confidence            45678999999998765432         12335579999999999875       234567899999999999999865


Q ss_pred             CC
Q psy8825          66 PF   67 (92)
Q Consensus        66 p~   67 (92)
                      |+
T Consensus       234 p~  235 (336)
T 3g2f_A          234 DL  235 (336)
T ss_dssp             GG
T ss_pred             cC
Confidence            54

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.27  E-value=1.1e-11  Score=71.07  Aligned_cols=86  Identities=13%  Similarity=0.319  Sum_probs=56.8

Q ss_pred             CCCCccccCCCccccccCCC---------------CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPG---------------RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQP   65 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~---------------~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~   65 (92)
                      +.++.+||.|||.+......               .......|+..|++||.+.+. .++.+.|+|++|++++++++   
T Consensus       150 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---  226 (303)
T 1zy4_A          150 DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---  226 (303)
T ss_dssp             CTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---
T ss_pred             cCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---
Confidence            46778999999988765422               223445789999999998764 57889999999999999997   


Q ss_pred             CCCC-CCHHHHHHHHHhCCCcCCCCC
Q psy8825          66 PFDG-EDEEELFAAITDHSVSYPKMA   90 (92)
Q Consensus        66 p~~~-~~~~~~~~~i~~~~~~~p~~~   90 (92)
                      ||.. .+.......+......+|..+
T Consensus       227 p~~~~~~~~~~~~~~~~~~~~~~~~~  252 (303)
T 1zy4_A          227 PFSTGMERVNILKKLRSVSIEFPPDF  252 (303)
T ss_dssp             CCSSHHHHHHHHHHHHSTTCCCCTTC
T ss_pred             ccCCchhHHHHHHhccccccccCccc
Confidence            4432 334455666666666655543

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.26  E-value=2.3e-11  Score=77.04  Aligned_cols=66  Identities=20%  Similarity=0.348  Sum_probs=58.4

Q ss_pred             ccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           6 PFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      .+|+.|||.+.............|+..|++||.+.+..++.+.|+|++|++++++++|..||.+..
T Consensus       162 ~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~  227 (676)
T 3qa8_A          162 IHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW  227 (676)
T ss_dssp             EEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC
T ss_pred             eEEEcccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc
Confidence            478999999988766666667899999999999988889999999999999999999999997653

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.26  E-value=8.9e-12  Score=71.39  Aligned_cols=67  Identities=22%  Similarity=0.367  Sum_probs=53.6

Q ss_pred             CCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccC--CCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           4 SQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQ--PYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~--~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      ++.+||.|||.+...... .......|+..|++||.+...  .++.+.|+|++|++++++++|..||...
T Consensus       159 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  228 (295)
T 2clq_A          159 SGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL  228 (295)
T ss_dssp             TCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGG
T ss_pred             CCCEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCC
Confidence            678999999998766443 334556899999999998654  3788999999999999999999999764

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.26  E-value=2e-11  Score=70.53  Aligned_cols=66  Identities=17%  Similarity=0.258  Sum_probs=54.5

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCC-CchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      .++.+||.|||.+..... .......|+..|++||.+....+ +.+.|+|++|++++++++|..||.+
T Consensus       175 ~~~~~kl~dfg~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  241 (312)
T 2iwi_A          175 RRGCAKLIDFGSGALLHD-EPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER  241 (312)
T ss_dssp             TTTEEEECCCSSCEECCS-SCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred             CCCeEEEEEcchhhhccc-CcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCC
Confidence            567899999999876643 33456679999999999876665 4589999999999999999999975

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.26  E-value=1e-11  Score=72.51  Aligned_cols=69  Identities=14%  Similarity=0.127  Sum_probs=54.0

Q ss_pred             CCCCccccCCCccccccCCCC-----CCCCCCcCCcCccchhhccCC------CCchhhHHhHHHHHHHHHhC-------
Q psy8825           2 GESQPFRERTLSHQDKIRPGR-----GSNPRPSAYSILLFQIILYQP------YGKSVDWWAYGVLLYEMLVG-------   63 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~-----~~~~~~g~~~~~~pe~~~~~~------~~~~~~~ws~g~~~~~~~~g-------   63 (92)
                      +.++.+||.|||.+.......     ......|+..|++||.+....      ++.+.|+|++|++++++++|       
T Consensus       181 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~  260 (342)
T 1b6c_B          181 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH  260 (342)
T ss_dssp             CTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred             CCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcc
Confidence            467789999999987664433     235568999999999987652      23678999999999999998       


Q ss_pred             ---CCCCCCC
Q psy8825          64 ---QPPFDGE   70 (92)
Q Consensus        64 ---~~p~~~~   70 (92)
                         ..||...
T Consensus       261 ~~~~~p~~~~  270 (342)
T 1b6c_B          261 EDYQLPYYDL  270 (342)
T ss_dssp             CCCCCTTTTT
T ss_pred             cccccCcccc
Confidence               7788654

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.24  E-value=3.4e-11  Score=69.68  Aligned_cols=78  Identities=18%  Similarity=0.293  Sum_probs=53.1

Q ss_pred             CCccccCCCccccccCCCC---CCCCCCcCCcCccchhhcc-----------CCCCchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           4 SQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILY-----------QPYGKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~-----------~~~~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      ++.+||.|||.+.......   .....+|++.|++||.+..           ..++.+.|+|++|++++++++|..||..
T Consensus       162 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  241 (313)
T 3cek_A          162 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ  241 (313)
T ss_dssp             TTEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhh
Confidence            3578999999987664432   2334579999999999865           3577899999999999999999999976


Q ss_pred             CC-HHHHHHHHHh
Q psy8825          70 ED-EEELFAAITD   81 (92)
Q Consensus        70 ~~-~~~~~~~i~~   81 (92)
                      .. ....+..+..
T Consensus       242 ~~~~~~~~~~~~~  254 (313)
T 3cek_A          242 IINQISKLHAIID  254 (313)
T ss_dssp             CCSHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHh
Confidence            53 3333444443

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.24  E-value=5.7e-12  Score=72.36  Aligned_cols=68  Identities=13%  Similarity=0.231  Sum_probs=51.1

Q ss_pred             CCCCccccCCCccccccCCCC----CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGR----GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~----~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      +.++.+||.|||.+.......    ......++..|++||.+.+..++.+.|+|++|++++++++|..|+..
T Consensus       148 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~  219 (295)
T 3ugc_A          148 ENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS  219 (295)
T ss_dssp             EETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCS
T ss_pred             cCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCC
Confidence            346789999999987764432    22334567789999999888899999999999999999999888764

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.23  E-value=7.6e-12  Score=71.56  Aligned_cols=79  Identities=14%  Similarity=0.239  Sum_probs=56.2

Q ss_pred             cccCCCccccccCCCCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCC
Q psy8825           7 FRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAITDHSV   84 (92)
Q Consensus         7 ~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~i~~~~~   84 (92)
                      +|+.|||.+......   ....|+..|++||.+.. ..++.+.|+|++|++++++++ +.+|+...+...... +.....
T Consensus       160 ~kl~Dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~-~~~~~~  235 (289)
T 4fvq_A          160 IKLSDPGISITVLPK---DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQ-FYEDRH  235 (289)
T ss_dssp             EEECCCCSCTTTSCH---HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH-HHHTTC
T ss_pred             eeeccCcccccccCc---cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHH-HhhccC
Confidence            899999988554322   23457888999999876 567899999999999999999 456666655544443 334444


Q ss_pred             cCCCC
Q psy8825          85 SYPKM   89 (92)
Q Consensus        85 ~~p~~   89 (92)
                      .+|..
T Consensus       236 ~~~~~  240 (289)
T 4fvq_A          236 QLPAP  240 (289)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            44443

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.22  E-value=3.6e-12  Score=73.47  Aligned_cols=68  Identities=13%  Similarity=0.157  Sum_probs=54.5

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      +.++.+||.|||.+.......   ......|++.|++||.+.+ .++.+.|+|++|++++++++|..||.+.
T Consensus       167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~  237 (307)
T 2nru_A          167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEH  237 (307)
T ss_dssp             CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTT
T ss_pred             cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccC
Confidence            467789999999886654322   2334679999999998764 4678899999999999999999999764

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.19  E-value=7.8e-12  Score=72.64  Aligned_cols=69  Identities=14%  Similarity=0.188  Sum_probs=55.5

Q ss_pred             CCCCccccCCCccccccCCCC----CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGR----GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~----~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      +.++.+||.|||.+.......    ......++..|++||.+.+..++.+.|+|++|++++++++|..||...
T Consensus       168 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~  240 (318)
T 3lxp_A          168 DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSP  240 (318)
T ss_dssp             CTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSH
T ss_pred             cCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCccccc
Confidence            467789999999987765443    233456788899999998888888999999999999999999888653

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.18  E-value=5.6e-12  Score=73.40  Aligned_cols=69  Identities=13%  Similarity=0.190  Sum_probs=56.0

Q ss_pred             CCCCccccCCCccccccCCCC----CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGR----GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~----~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      +.++.+||.|||.+.......    ......|+..|++||.+.+..++.+.|+|++|++++++++|..||...
T Consensus       161 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~  233 (327)
T 3lxl_A          161 ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSP  233 (327)
T ss_dssp             EETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSH
T ss_pred             CCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccc
Confidence            356789999999987664432    233456888899999998888889999999999999999999888543

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.14  E-value=1.4e-10  Score=66.03  Aligned_cols=64  Identities=13%  Similarity=0.088  Sum_probs=50.5

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      ...+|+.|||.+......   ....|+..|++||.+... .++.+.|+|++|+++++++++..++...
T Consensus       170 ~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~  234 (289)
T 1x8b_A          170 KVMFKIGDLGHVTRISSP---QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG  234 (289)
T ss_dssp             CCCEEECCCTTCEETTCS---CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS
T ss_pred             ceEEEEcccccccccCCc---cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch
Confidence            346899999988765433   234689999999998765 4567899999999999999888766544

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.13  E-value=4.3e-11  Score=68.80  Aligned_cols=66  Identities=15%  Similarity=0.189  Sum_probs=54.0

Q ss_pred             CCCCccccCCCccccccCCCC----CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGR----GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPF   67 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~----~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~   67 (92)
                      +.++.+||.|||.+.......    ......|+..|++||.+.+..++.+.|+|++|++++++++|..|+
T Consensus       160 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  229 (302)
T 4e5w_A          160 ESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSD  229 (302)
T ss_dssp             EETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGG
T ss_pred             cCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCC
Confidence            356789999999987765443    234457888899999998888889999999999999999987764

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.09  E-value=3.1e-11  Score=70.31  Aligned_cols=67  Identities=13%  Similarity=0.251  Sum_probs=54.0

Q ss_pred             CCCccccCCCccccccCCCCC----CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           3 ESQPFRERTLSHQDKIRPGRG----SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~----~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      .++.+||.|||.+........    .....++..|++||.+.+..++.+.|+|++|++++++++|..|+..
T Consensus       180 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~  250 (326)
T 2w1i_A          180 NENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS  250 (326)
T ss_dssp             ETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGS
T ss_pred             CCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCC
Confidence            467889999999877654432    2334677789999999888888999999999999999999887753

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.03  E-value=2.6e-10  Score=72.20  Aligned_cols=61  Identities=13%  Similarity=0.090  Sum_probs=50.4

Q ss_pred             CccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCC
Q psy8825           5 QPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG   69 (92)
Q Consensus         5 ~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~   69 (92)
                      +.+||.|||.+......   ...+||+.|++||++... ++.+.|+|++|++++++++|..|+.+
T Consensus       218 ~~~kl~DFG~a~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~  278 (681)
T 2pzi_A          218 EQLKLIDLGAVSRINSF---GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNG  278 (681)
T ss_dssp             SCEEECCCTTCEETTCC---SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETT
T ss_pred             CcEEEEecccchhcccC---CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcc
Confidence            37899999998766443   456899999999998654 37889999999999999999887654

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=98.99  E-value=7.6e-11  Score=68.22  Aligned_cols=68  Identities=19%  Similarity=0.285  Sum_probs=51.2

Q ss_pred             CCCCccccCCCccccccCCCCC----------CCCCCcCCcCccchhhccCC---CCchhhHHhHHHHHHHHHhCCCCCC
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG----------SNPRPSAYSILLFQIILYQP---YGKSVDWWAYGVLLYEMLVGQPPFD   68 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~----------~~~~~g~~~~~~pe~~~~~~---~~~~~~~ws~g~~~~~~~~g~~p~~   68 (92)
                      +.++.+||.|||.+........          .....|+..|++||.+....   ++.+.|+|++|++++++++|..||.
T Consensus       168 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~  247 (317)
T 2buj_A          168 GDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD  247 (317)
T ss_dssp             CTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTH
T ss_pred             cCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChh
Confidence            4677899999998755432110          11235688999999986543   5788999999999999999999985


Q ss_pred             C
Q psy8825          69 G   69 (92)
Q Consensus        69 ~   69 (92)
                      .
T Consensus       248 ~  248 (317)
T 2buj_A          248 M  248 (317)
T ss_dssp             H
T ss_pred             h
Confidence            3

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.75  E-value=9e-10  Score=64.37  Aligned_cols=59  Identities=7%  Similarity=-0.125  Sum_probs=46.7

Q ss_pred             ccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHH-HHHHHhCCCCCCC
Q psy8825           6 PFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVL-LYEMLVGQPPFDG   69 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~-~~~~~~g~~p~~~   69 (92)
                      .+||+|||.+......    ..+||+.|+|||++.+.. +.+.|+|+++.. .++++.|..||.+
T Consensus       220 ~vkL~DFG~a~~~~~~----~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~  279 (336)
T 2vuw_A          220 QVSIIDYTLSRLERDG----IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN  279 (336)
T ss_dssp             EEEECCCTTCBEEETT----EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH
T ss_pred             eEEEeeccccEecCCC----cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc
Confidence            7999999999766433    348999999999998665 889999998655 6666678777743

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=98.41  E-value=3.2e-07  Score=52.78  Aligned_cols=47  Identities=28%  Similarity=0.608  Sum_probs=36.3

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      ++.+||.|||.+....                     ...++.+.|+|++|++++++++|..||.+..
T Consensus       156 ~~~~kl~Dfg~a~~~~---------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~  202 (299)
T 3m2w_A          156 NAILKLTDFGFAKETT---------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNH  202 (299)
T ss_dssp             TCCEEECCCTTCEECT---------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--
T ss_pred             CCcEEEeccccccccc---------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCc
Confidence            5678999999874432                     1345678999999999999999999997654

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.36  E-value=2.3e-09  Score=67.00  Aligned_cols=58  Identities=7%  Similarity=0.007  Sum_probs=31.6

Q ss_pred             CCCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYE   59 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~   59 (92)
                      +++++.+||+|||.++..... ....+.+||+.|++||++.+. +....|+|+.++..+.
T Consensus       372 L~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~  430 (569)
T 4azs_A          372 VDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFN  430 (569)
T ss_dssp             ECTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC------------------CC
T ss_pred             ECCCCCEEEeecccCeeCCCCCccccCceechhhccHHHhCCC-CCCcccccccccchhh
Confidence            467899999999998776544 345567899999999998654 4556788988876443

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=97.78  E-value=1.8e-05  Score=45.43  Aligned_cols=28  Identities=25%  Similarity=0.331  Sum_probs=25.2

Q ss_pred             CCchhhHHhHHHHHHHHHhCCCCCCCCC
Q psy8825          44 YGKSVDWWAYGVLLYEMLVGQPPFDGED   71 (92)
Q Consensus        44 ~~~~~~~ws~g~~~~~~~~g~~p~~~~~   71 (92)
                      ++.+.|+|++|++++++++|..||.+.+
T Consensus       179 ~~~~~Di~slG~il~elltg~~Pf~~~~  206 (286)
T 3uqc_A          179 ANPQDDIRGIGASLYALLVNRWPLPEAG  206 (286)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSEECSCCCS
T ss_pred             CCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence            6788999999999999999999998654

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=97.48  E-value=1.4e-06  Score=54.27  Aligned_cols=62  Identities=10%  Similarity=0.009  Sum_probs=47.2

Q ss_pred             ccccCCCccccccCCCCC--------CCCCCcCCcCccchhhcc--CCCCchhhHHhHHHHHHHHHhCCCCC
Q psy8825           6 PFRERTLSHQDKIRPGRG--------SNPRPSAYSILLFQIILY--QPYGKSVDWWAYGVLLYEMLVGQPPF   67 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~--------~~~~~g~~~~~~pe~~~~--~~~~~~~~~ws~g~~~~~~~~g~~p~   67 (92)
                      .+||.|||.++.......        ..+.+||+.|++||++..  ..|+...|+|+..+-..+......+|
T Consensus       467 ~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          467 DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            689999999987754322        235689999999999876  55777778998888777777666555

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	92
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-13
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-13
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-13
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-13
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	6e-13
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-12
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	5e-12
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	9e-12
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-11
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-11
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-11
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-11
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-11
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-11
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-11
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-11
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	7e-11
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	7e-11
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-10
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-10
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-10
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	4e-10
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-10
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	7e-10
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	9e-10
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-09
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-09
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-09
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	5e-09
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	6e-09
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	9e-09
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-08
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-08
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-08
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-08
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-08
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-08
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-08
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	4e-08
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-08
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	5e-08
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-08
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	7e-08
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	8e-08
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	9e-08
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-07
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-07
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-07
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-07
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	4e-07
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	7e-07
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	8e-07
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	8e-07
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-06
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-06
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-06
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	8e-06
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	9e-06
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-05
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-04
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	0.001

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.5 bits (149), Expect = 1e-13
 Identities = 18/51 (35%), Positives = 30/51 (58%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +I  + + + VD W+ GVL YE LVG+PPF+    +E +  I+    ++P 
Sbjct: 175 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 225

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 61.2 bits (148), Expect = 2e-13
 Identities = 20/78 (25%), Positives = 33/78 (42%)

Query: 10  RTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG 69
             L   +K+R   G+    +   I       +  YGK VD W+ GV++Y +L G PPF  
Sbjct: 158 CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 217

Query: 70  EDEEELFAAITDHSVSYP 87
             +  +   I   +  + 
Sbjct: 218 RKQMLMLRMIMSGNYQFG 235

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.8 bits (147), Expect = 3e-13
 Identities = 11/52 (21%), Positives = 25/52 (48%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           ++  +     + D W+ G L+Y +L G  PF  E  +++   I +   ++ +
Sbjct: 173 EVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDE 224

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.9 bits (147), Expect = 4e-13
 Identities = 31/52 (59%), Positives = 40/52 (76%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +I+L Q Y  SVDWW++GVLLYEML+GQ PF G+DEEELF +I   +  YP+
Sbjct: 173 EILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR 224

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.0 bits (145), Expect = 6e-13
 Identities = 15/51 (29%), Positives = 27/51 (52%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           ++  +   KS D WA G ++Y+++ G PPF   +E  +F  I      +P+
Sbjct: 181 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 231

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 58.9 bits (142), Expect = 2e-12
 Identities = 18/52 (34%), Positives = 30/52 (57%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +++  +PY K+VD W+ GV+ Y +L G PPF  E++ +LF  I      +  
Sbjct: 179 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 230

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (138), Expect = 5e-12
 Identities = 14/70 (20%), Positives = 26/70 (37%)

Query: 10  RTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG 69
              +   + R      P   A  +++ +    +PY    D W+ G+ L EM   +PP   
Sbjct: 158 AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE 217

Query: 70  EDEEELFAAI 79
            +   +   I
Sbjct: 218 LNPMRVLLKI 227

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.5 bits (136), Expect = 9e-12
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD 81
            +    Y +  D W+ G LLYE+    PPF    ++EL   I +
Sbjct: 185 QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 228

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (136), Expect = 1e-11
 Identities = 20/53 (37%), Positives = 33/53 (62%)

Query: 36  FQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
            +++    YG++VDWW  GV++YEM+ G+ PF  +D E LF  I    + +P+
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 226

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 1e-11
 Identities = 13/43 (30%), Positives = 24/43 (55%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           +++  + YG  VD W+ G++  EM+ G+PP+  E+       I
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 1e-11
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL 75
           + +    Y    D W+ G+ L EM VG+ P    D +EL
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 56.2 bits (135), Expect = 2e-11
 Identities = 15/51 (29%), Positives = 25/51 (49%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           ++   +P G   D W+ GVL Y +L G  PF GE+++E    +     +  
Sbjct: 195 EVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 245

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 55.8 bits (134), Expect = 2e-11
 Identities = 18/52 (34%), Positives = 26/52 (50%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +I+  +P G   D WA GVL Y +L G  PF GED+ E    +      + +
Sbjct: 198 EIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDE 249

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (133), Expect = 3e-11
 Identities = 13/45 (28%), Positives = 21/45 (46%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD 81
           +++L   Y   VD W+ G +  EM   +P F G  + +    I D
Sbjct: 185 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD 229

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.5 bits (133), Expect = 3e-11
 Identities = 16/51 (31%), Positives = 28/51 (54%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           I+ Y+P G   D W+ GV+ Y +L G  PF G+ ++E  A ++  +  +  
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.7 bits (131), Expect = 5e-11
 Identities = 18/52 (34%), Positives = 33/52 (63%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +++  +PY KS+DWW++G+L+YEML G  PF   +  + +  I +  + +P 
Sbjct: 171 EVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP 222

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (130), Expect = 7e-11
 Identities = 12/49 (24%), Positives = 23/49 (46%)

Query: 41  YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPKM 89
             PY    D +A+G++LYE++ GQ P+   +  +    +       P +
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 231

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 54.0 bits (129), Expect = 7e-11
 Identities = 12/51 (23%), Positives = 20/51 (39%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           +           D ++ G +LYE+L G+PPF G+    +           P
Sbjct: 184 EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPP 234

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 1e-10
 Identities = 13/52 (25%), Positives = 24/52 (46%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
            +   + YG  VD WA G +L E+L+  P   G+ + +    I +   +  +
Sbjct: 171 LLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTE 222

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 1e-10
 Identities = 13/51 (25%), Positives = 21/51 (41%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
            ++  + YG  +D W  G ++ EM    P   G  E+   A I+    S  
Sbjct: 192 LLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 242

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.2 bits (124), Expect = 4e-10
 Identities = 17/47 (36%), Positives = 26/47 (55%)

Query: 41  YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
              + K+VDWW+ GVL+YE+L G  PF  + E+   A I+   +   
Sbjct: 206 DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE 252

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 4e-10
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 36  FQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
             I     Y  S+D W+ G +L E+L+GQP F G+   +    I
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.1 bits (124), Expect = 4e-10
 Identities = 23/51 (45%), Positives = 31/51 (60%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           IIL + Y K+VDWWA GVL+YEM  G PPF  +   +++  I    V +P 
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (123), Expect = 7e-10
 Identities = 10/44 (22%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 39  ILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE-DEEELFAAITD 81
           +  + Y +SVD +A+G+ + EM   + P+    +  +++  +T 
Sbjct: 184 MYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS 227

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 51.0 bits (121), Expect = 9e-10
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 41  YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
            + Y  ++D W+ G +  EM+ G P F G  E +    I
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRI 213

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (119), Expect = 2e-09
 Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAITDHSVSYPK 88
           + +  + +  + D W +GV L+EM   GQ P+ G +  ++   I       P+
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 2e-09
 Identities = 8/46 (17%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEML-VGQPPFDGEDEEELFAAITD 81
           + +  + +    D W++G+LL+E+   G+ P+     +++   +  
Sbjct: 170 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK 215

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.3 bits (117), Expect = 5e-09
 Identities = 10/53 (18%), Positives = 21/53 (39%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPKM 89
            +     Y  S DW++ G +L+++L G  PF     ++             ++
Sbjct: 176 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVEL 228

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (116), Expect = 5e-09
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
            ++  + Y  +VD W+ G +  EM+  +  F G+ E +    I
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (115), Expect = 6e-09
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 36  FQIILYQPYGKSVDWWAYGVLLYEML-VGQPPFDGEDEEELFAAITD 81
            + +  + Y    D W++GVLL+E+  +G  P+ G   EELF  + +
Sbjct: 206 PEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 252

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 9e-09
 Identities = 12/48 (25%), Positives = 22/48 (45%)

Query: 41  YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           +  Y ++VD W+ G ++ E+L G+  F G D  +    I     +   
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 240

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 48.1 bits (114), Expect = 1e-08
 Identities = 10/52 (19%), Positives = 18/52 (34%)

Query: 28  PSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           P   +  +   +    Y   VD W+ G+   E+   +PP    +       I
Sbjct: 175 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 226

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (113), Expect = 1e-08
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)

Query: 38  IILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDE 72
            I Y  Y G+S   W+ G+LLY+M+ G  PF+ ++E
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 215

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (113), Expect = 1e-08
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEML-VGQPPFDGEDEEELFAAI 79
            I Y  +    D W++GVL++E    GQ P+ G    E+ A +
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 223

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (113), Expect = 2e-08
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEML-VGQPPFDGEDEEELFAAITDH 82
           + I ++ +    D W+YGV ++E L  GQ P+      E+ A I   
Sbjct: 182 ECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG 228

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (111), Expect = 2e-08
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAI 79
           +  LY  +    D W++G+LL E+   G+ P+ G    E+   +
Sbjct: 184 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 227

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 47.1 bits (111), Expect = 2e-08
 Identities = 8/43 (18%), Positives = 12/43 (27%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
              L +   +  D  A G +    L G  P+ G          
Sbjct: 183 NTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKY 225

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.7 bits (110), Expect = 3e-08
 Identities = 13/71 (18%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 10  RTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEML-VGQPPFD 68
           R L           +            + I Y+ +  + D W+YG++++E++  G+ P+ 
Sbjct: 176 RFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYW 235

Query: 69  GEDEEELFAAI 79
               +++  AI
Sbjct: 236 DMTNQDVINAI 246

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.8 bits (110), Expect = 4e-08
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQ-PPFDGEDEEELFAAITDHSV 84
            I Y  Y    D WAYGV+L+E+      P+ G   EE+   + D ++
Sbjct: 213 SIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNI 260

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 4e-08
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
           ++  + Y KS D W+ GV++Y +L G PPF       +   +
Sbjct: 184 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 225

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 5e-08
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
            I+ +  Y ++VD W+ G ++ EM+ G+  F G D  +    I   + + P
Sbjct: 189 VILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPP 239

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (109), Expect = 5e-08
 Identities = 11/45 (24%), Positives = 21/45 (46%)

Query: 44  YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
           + + VD W+ G++L  ML G+ P+D   +     +      +Y  
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN 227

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (108), Expect = 7e-08
 Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 42  QPYGKSVDWWAYGVLLYEMLVG-QPPFDGEDEEELFAAITDHSVSYPK 88
           + Y  S+D W+ G +  E+    +P F G D ++    I     +  +
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTE 224

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (108), Expect = 8e-08
 Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEML-VGQPPFDGEDEEELFAAITD 81
           +++Y  +    D WA+GVL++E+  +G+ P++     E    I  
Sbjct: 172 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 216

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 9e-08
 Identities = 15/52 (28%), Positives = 25/52 (48%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYPK 88
            ++  + Y KS+D W+ G +L EML  +P F G+   +    I     S  +
Sbjct: 183 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 234

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 1e-07
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEML-VGQPPFDGEDEEELFAAITDH 82
           + IL++ Y    D W+YGV ++E++  G  P+DG    E+ + +   
Sbjct: 183 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 229

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 1e-07
 Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAI 79
           ++  +  Y    D W++GVL++E+   G+ P++     E+   I
Sbjct: 172 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 1e-07
 Identities = 11/46 (23%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAITD 81
           + +  Q +    D W++GVLL+E++  G PP+   +  ++   +  
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 249

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (104), Expect = 2e-07
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAITD 81
           + + Y  Y  + D W+YGVLL+E++  G  P+ G    EL+  +  
Sbjct: 196 ESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 241

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 4e-07
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAITD 81
           + I Y  +    D W++G+LL E++  G+ P+ G    E+   +  
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.1 bits (100), Expect = 7e-07
 Identities = 9/38 (23%), Positives = 21/38 (55%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE 74
           +++L  P+G   D W+   L++E++ G   F+ ++   
Sbjct: 199 EVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHS 236

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.9 bits (100), Expect = 8e-07
 Identities = 7/42 (16%), Positives = 12/42 (28%)

Query: 38  IILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI 79
             L     +  D  + G +L    +G  P+ G          
Sbjct: 184 THLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY 225

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 8e-07
 Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 36  FQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAITDH 82
            + I ++ +  + D W +GV ++E+L+ G  PF G    ++   I + 
Sbjct: 178 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG 225

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (99), Expect = 1e-06
 Identities = 12/51 (23%), Positives = 26/51 (50%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVSYP 87
           ++IL   Y ++VD W+ G ++ EM+  +  F G D  + +  + +   +  
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (98), Expect = 1e-06
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 39  ILYQPYGKSVDWWAYGVLLYEML-VGQPPFDGEDEEELFAAITDHSVSYPK 88
           +    Y    D W+YG+LL+E+  +G  P+ G   +  F  +  +     +
Sbjct: 238 LFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQ 288

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.6 bits (97), Expect = 2e-06
 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAITDH 82
           + + Y  +    D WA+GVLL+E+   G  P+ G D  +++  +   
Sbjct: 186 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 232

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 39.8 bits (92), Expect = 8e-06
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 41  YQPYGKSVDWWAYGVLLYEMLVGQPPF-DGEDEEELFAAI 79
           YQ Y  S+D W+ G +L  M+  + PF  G D  +    I
Sbjct: 204 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 243

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 9e-06
 Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 39  ILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAITD 81
           I Y+ +  + D W++G++++E++  G+ P+      E+  AI D
Sbjct: 185 ISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND 228

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 1e-05
 Identities = 9/49 (18%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEML-VGQPPFDGEDEEELFAAITDHSV 84
           + +    +    D W++GV+L+E+  + + P+ G   E++   + +  +
Sbjct: 205 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 253

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 1e-04
 Identities = 5/34 (14%), Positives = 14/34 (41%)

Query: 41  YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE 74
           +    K  D +A G++ +E+          ++ +
Sbjct: 192 HFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 225

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.6 bits (76), Expect = 0.001
 Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 1/52 (1%)

Query: 37  QIILYQPYGKSVDWWAYGVLLYEML-VGQPPFDGEDEEELFAAITDHSVSYP 87
           + I    Y    D W+YG+ L+E+  +G  P+ G   +  F  +        
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 268

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	92
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.88
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.87
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.86
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.86
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.84
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.84
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.83
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.82
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.81
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.81
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.8
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.77
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.76
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.76
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.74
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.74
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.73
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.73
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.73
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.73
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.72
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.72
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.72
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.72
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.72
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.71
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.71
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.71
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.71
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.7
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.7
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.7
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.69
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.69
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.69
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.67
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.67
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.65
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.64
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.64
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.64
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.63
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.63
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.62
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.62
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.62
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.61
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.61
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.59
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.57
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.56
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.56
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.55
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.55
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.54
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.5
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.49
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.44
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.42
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.41
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.31
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.26

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.6e-22  Score=117.46  Aligned_cols=92  Identities=24%  Similarity=0.479  Sum_probs=82.8

Q ss_pred             CCCCCccccCCCccccccCC-CCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRP-GRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +++++.+||+|||.++.... .....+.+||+.|+|||++.+..|+.++|+||+|+++++|++|..||.+.+..+++.++
T Consensus       138 l~~~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i  217 (337)
T d1o6la_         138 LDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI  217 (337)
T ss_dssp             ECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             ecCCCCEEEeecccccccccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHH
Confidence            36788999999999987644 45667789999999999999999999999999999999999999999999999999999


Q ss_pred             HhCCCcCCCCCCC
Q psy8825          80 TDHSVSYPKMAVF   92 (92)
Q Consensus        80 ~~~~~~~p~~~~~   92 (92)
                      ....+.+|..+++
T Consensus       218 ~~~~~~~p~~~s~  230 (337)
T d1o6la_         218 LMEEIRFPRTLSP  230 (337)
T ss_dssp             HHCCCCCCTTSCH
T ss_pred             hcCCCCCCccCCH
Confidence            9999999988763

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.3e-22  Score=114.68  Aligned_cols=91  Identities=20%  Similarity=0.398  Sum_probs=77.4

Q ss_pred             CCCCCccccCCCccccccCCC---CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPG---RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFA   77 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~---~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~   77 (92)
                      +++++.+|+.|||.+..+...   ....+.+||+.|+|||++.+..++.++|+||+|++++++++|..||.+.+..+++.
T Consensus       141 l~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~  220 (288)
T d1uu3a_         141 LNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ  220 (288)
T ss_dssp             ECTTSCEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             cCCCceEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHH
Confidence            356789999999999876543   23456789999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCcCCCCCC
Q psy8825          78 AITDHSVSYPKMAV   91 (92)
Q Consensus        78 ~i~~~~~~~p~~~~   91 (92)
                      +|.+..+.+|..++
T Consensus       221 ~i~~~~~~~p~~~s  234 (288)
T d1uu3a_         221 KIIKLEYDFPEKFF  234 (288)
T ss_dssp             HHHTTCCCCCTTCC
T ss_pred             HHHcCCCCCCccCC
Confidence            99999999998775

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=4.2e-22  Score=112.38  Aligned_cols=90  Identities=22%  Similarity=0.432  Sum_probs=79.4

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      ++.++.+||+|||.+..... ......+||+.|+|||++.+..++.+.|+||+|++++++++|..||.+.+..+.+.+|.
T Consensus       139 l~~~~~~kl~DFG~a~~~~~-~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~  217 (263)
T d2j4za1         139 LGSAGELKIADFGWSVHAPS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS  217 (263)
T ss_dssp             ECTTSCEEECCCCSCSCCCC-CCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred             ecCCCCEeecccceeeecCC-CcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence            35678999999999976543 33456789999999999998889999999999999999999999999999999999999


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      +..+.+|..++
T Consensus       218 ~~~~~~p~~~s  228 (263)
T d2j4za1         218 RVEFTFPDFVT  228 (263)
T ss_dssp             TTCCCCCTTSC
T ss_pred             cCCCCCCccCC
Confidence            99999998765

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.86  E-value=1.1e-21  Score=112.98  Aligned_cols=89  Identities=20%  Similarity=0.506  Sum_probs=79.4

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +++++.+||+|||.+.....  ...+.+||+.|+|||++.+..|+.+.|+||+|+++|+|++|..||.+.+..+++.+|.
T Consensus       137 l~~~g~vkL~DFG~a~~~~~--~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~  214 (316)
T d1fota_         137 LDKNGHIKITDFGFAKYVPD--VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKIL  214 (316)
T ss_dssp             ECTTSCEEECCCSSCEECSS--CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred             EcCCCCEEEecCccceEecc--ccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHH
Confidence            36788999999999977543  3456799999999999998889999999999999999999999999999999999999


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      ...+.+|..++
T Consensus       215 ~~~~~~p~~~s  225 (316)
T d1fota_         215 NAELRFPPFFN  225 (316)
T ss_dssp             HCCCCCCTTSC
T ss_pred             cCCCCCCCCCC
Confidence            99999988775

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=2.5e-21  Score=112.87  Aligned_cols=89  Identities=27%  Similarity=0.525  Sum_probs=79.5

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +++++.+||+|||.+.....  ...+.+||+.|+|||++.+..++.+.|+||+|+++|+|++|..||.+.+...++.+|.
T Consensus       174 l~~~g~ikL~DFG~a~~~~~--~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~  251 (350)
T d1rdqe_         174 IDQQGYIQVTDFGFAKRVKG--RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV  251 (350)
T ss_dssp             ECTTSCEEECCCTTCEECSS--CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             cCCCCCEEeeeceeeeeccc--ccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHh
Confidence            35788999999999977643  3456789999999999998889999999999999999999999999999999999999


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      ...+.+|..++
T Consensus       252 ~~~~~~p~~~s  262 (350)
T d1rdqe_         252 SGKVRFPSHFS  262 (350)
T ss_dssp             HCCCCCCTTCC
T ss_pred             cCCCCCCccCC
Confidence            99999888775

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.84  E-value=5e-21  Score=109.91  Aligned_cols=87  Identities=24%  Similarity=0.460  Sum_probs=62.8

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      ++++.+|++|||.+..........+.+||+.|+|||++.+..|+.+.|+||+|+++++|++|..||.+....+...+|.+
T Consensus       144 ~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~  223 (307)
T d1a06a_         144 DEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK  223 (307)
T ss_dssp             STTCCEEECCC------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHT
T ss_pred             CCCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence            35678999999999877666667778999999999999988899999999999999999999999999999999999998


Q ss_pred             CCCcCCC
Q psy8825          82 HSVSYPK   88 (92)
Q Consensus        82 ~~~~~p~   88 (92)
                      ..+.++.
T Consensus       224 ~~~~~~~  230 (307)
T d1a06a_         224 AEYEFDS  230 (307)
T ss_dssp             TCCCCCT
T ss_pred             cCCCCCC
Confidence            8776653

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.4e-20  Score=108.54  Aligned_cols=90  Identities=37%  Similarity=0.629  Sum_probs=80.2

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      ++.+.+|+.|||.+...... ......+||+.|+|||++.+..++.++|+||+|+++|+|++|..||.+.+..+++.+|.
T Consensus       137 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~  216 (320)
T d1xjda_         137 DKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR  216 (320)
T ss_dssp             CTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             cCCCceeccccchhhhcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            56789999999999876543 44555789999999999999999999999999999999999999999999999999999


Q ss_pred             hCCCcCCCCCC
Q psy8825          81 DHSVSYPKMAV   91 (92)
Q Consensus        81 ~~~~~~p~~~~   91 (92)
                      .+.+.+|+.++
T Consensus       217 ~~~~~~p~~~s  227 (320)
T d1xjda_         217 MDNPFYPRWLE  227 (320)
T ss_dssp             HCCCCCCTTSC
T ss_pred             cCCCCCCccCC
Confidence            99999998775

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.3e-20  Score=106.54  Aligned_cols=91  Identities=18%  Similarity=0.241  Sum_probs=71.5

Q ss_pred             CCCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      ++.++.+||.|||.+...... ....+.+||+.|+|||++.+..|+.+.|+||+|+++|++++|..||.+.+..++..+|
T Consensus       147 l~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i  226 (269)
T d2java1         147 LDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI  226 (269)
T ss_dssp             ECTTSCEEECCHHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             cCCCCcEEEeeccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHH
Confidence            356789999999999877554 3455679999999999999888999999999999999999999999999999999999


Q ss_pred             HhCCC-cCCCCCC
Q psy8825          80 TDHSV-SYPKMAV   91 (92)
Q Consensus        80 ~~~~~-~~p~~~~   91 (92)
                      .++.+ .+|..++
T Consensus       227 ~~~~~~~~~~~~s  239 (269)
T d2java1         227 REGKFRRIPYRYS  239 (269)
T ss_dssp             HHTCCCCCCTTSC
T ss_pred             HcCCCCCCCcccC
Confidence            88765 4555544

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=4e-20  Score=105.58  Aligned_cols=82  Identities=20%  Similarity=0.405  Sum_probs=70.8

Q ss_pred             CCCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      ++.++.+||+|||.+..+... ......+||+.|+|||++.+..++.+.|+||+|+++|+|++|..||.+.+..+.+.++
T Consensus       149 l~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~  228 (293)
T d1yhwa1         149 LGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI  228 (293)
T ss_dssp             ECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred             ECCCCcEeeccchhheeeccccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHH
Confidence            356789999999999877544 4556678999999999999888999999999999999999999999998887777776


Q ss_pred             HhC
Q psy8825          80 TDH   82 (92)
Q Consensus        80 ~~~   82 (92)
                      ...
T Consensus       229 ~~~  231 (293)
T d1yhwa1         229 ATN  231 (293)
T ss_dssp             HHH
T ss_pred             HhC
Confidence            654

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.81  E-value=3.7e-20  Score=107.89  Aligned_cols=86  Identities=20%  Similarity=0.375  Sum_probs=77.2

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH   82 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~   82 (92)
                      .++.+||.|||.+..+.......+.+||+.|+|||++.+..++.+.|+||+|+++++|++|..||.+.+..+.+..|.+.
T Consensus       161 ~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~  240 (350)
T d1koaa2         161 RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC  240 (350)
T ss_dssp             TSCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred             CCCeEEEeecchheecccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence            45789999999998887766666789999999999999988999999999999999999999999999999999999998


Q ss_pred             CCcCCC
Q psy8825          83 SVSYPK   88 (92)
Q Consensus        83 ~~~~p~   88 (92)
                      .+.++.
T Consensus       241 ~~~~~~  246 (350)
T d1koaa2         241 DWNMDD  246 (350)
T ss_dssp             CCCSCC
T ss_pred             CCCCCc
Confidence            877654

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.80  E-value=7.5e-20  Score=106.63  Aligned_cols=86  Identities=23%  Similarity=0.390  Sum_probs=78.0

Q ss_pred             CCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q psy8825           3 ESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH   82 (92)
Q Consensus         3 ~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~   82 (92)
                      .++.+||+|||.+..........+.+||+.|+|||++.+..++.+.|+|++|+++++|++|..||.+.+..+++.+|...
T Consensus       164 ~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~  243 (352)
T d1koba_         164 KASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRC  243 (352)
T ss_dssp             TCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHC
T ss_pred             CCCeEEEeecccceecCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence            46789999999998887776666779999999999999889999999999999999999999999999999999999998


Q ss_pred             CCcCCC
Q psy8825          83 SVSYPK   88 (92)
Q Consensus        83 ~~~~p~   88 (92)
                      .+.+|.
T Consensus       244 ~~~~~~  249 (352)
T d1koba_         244 DWEFDE  249 (352)
T ss_dssp             CCCCCS
T ss_pred             CCCCCc
Confidence            887765

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1e-18  Score=99.61  Aligned_cols=82  Identities=23%  Similarity=0.431  Sum_probs=74.3

Q ss_pred             ccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCc
Q psy8825           6 PFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHSVS   85 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~~~   85 (92)
                      .+|+.|||.+..........+..||+.|+|||++.+..++.+.|+||+|++++++++|..||.+.+..+.+..|....+.
T Consensus       155 ~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~  234 (293)
T d1jksa_         155 RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE  234 (293)
T ss_dssp             CEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCC
T ss_pred             ceEecchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC
Confidence            58999999998887777777889999999999999888999999999999999999999999999999999999888776


Q ss_pred             CC
Q psy8825          86 YP   87 (92)
Q Consensus        86 ~p   87 (92)
                      ++
T Consensus       235 ~~  236 (293)
T d1jksa_         235 FE  236 (293)
T ss_dssp             CC
T ss_pred             CC
Confidence            55

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.2e-18  Score=99.58  Aligned_cols=80  Identities=18%  Similarity=0.268  Sum_probs=71.6

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++.+|+.|||.+..........+.+||+.|+|||++.+..|+.+.|+||+|++++++++|..||.+.+..+++.+|.+
T Consensus       150 ~~~~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~  229 (305)
T d1blxa_         150 TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD  229 (305)
T ss_dssp             CTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             cCCCCeeecchhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence            45678999999998777666677788999999999999999999999999999999999999999999998888877765

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.76  E-value=1.1e-18  Score=102.12  Aligned_cols=90  Identities=18%  Similarity=0.337  Sum_probs=71.2

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCC---HHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGED---EEELF   76 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~---~~~~~   76 (92)
                      +++++.+||+|||.+..+... .....+||+.|+|||++.. ..|+.+.|+||+|+++|+|++|..||.+.+   ...+.
T Consensus       140 l~~~g~iKl~DFGla~~~~~~-~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~  218 (364)
T d1omwa3         140 LDEHGHVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID  218 (364)
T ss_dssp             ECSSSCEEECCCTTCEECSSS-CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHH
T ss_pred             EcCCCcEEEeeeceeeecCCC-cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            367889999999999766443 4456789999999999864 568999999999999999999999998653   34455


Q ss_pred             HHHHhCCCcCCCCCC
Q psy8825          77 AAITDHSVSYPKMAV   91 (92)
Q Consensus        77 ~~i~~~~~~~p~~~~   91 (92)
                      ..+....+.+|..++
T Consensus       219 ~~~~~~~~~~~~~~s  233 (364)
T d1omwa3         219 RMTLTMAVELPDSFS  233 (364)
T ss_dssp             HHSSSCCCCCCSSSC
T ss_pred             HhcccCCCCCCCCCC
Confidence            556666677777665

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=4.6e-19  Score=100.95  Aligned_cols=84  Identities=14%  Similarity=0.224  Sum_probs=69.3

Q ss_pred             CCCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhc-----cCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIIL-----YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE   74 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~-----~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~   74 (92)
                      ++.++.+||+|||.+...... ....+.+||+.|+|||++.     ...|+.+.|+||+|++++++++|..||.+.+..+
T Consensus       143 l~~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~  222 (288)
T d2jfla1         143 FTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR  222 (288)
T ss_dssp             ECTTSCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGG
T ss_pred             ECCCCCEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHH
Confidence            356789999999998665332 3345678999999999984     3457889999999999999999999999988888


Q ss_pred             HHHHHHhCCC
Q psy8825          75 LFAAITDHSV   84 (92)
Q Consensus        75 ~~~~i~~~~~   84 (92)
                      ++.++....+
T Consensus       223 ~~~~i~~~~~  232 (288)
T d2jfla1         223 VLLKIAKSEP  232 (288)
T ss_dssp             HHHHHHHSCC
T ss_pred             HHHHHHcCCC
Confidence            8888888754

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2e-18  Score=97.73  Aligned_cols=79  Identities=16%  Similarity=0.297  Sum_probs=58.1

Q ss_pred             CCCCccccCCCccccccCCC---CCCCCCCcCCcCccchhhcc---CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG---RGSNPRPSAYSILLFQIILY---QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~---~~~~~~~g~~~~~~pe~~~~---~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      +.++.+||+|||.+......   ....+..||+.|+|||++.+   ..|+.+.|+||+|+++|++++|..||.+.+....
T Consensus       138 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~  217 (276)
T d1uwha_         138 HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ  217 (276)
T ss_dssp             ETTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH
T ss_pred             cCCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHH
Confidence            56788999999998776433   23456789999999999864   3478899999999999999999999998665444


Q ss_pred             HHHHH
Q psy8825          76 FAAIT   80 (92)
Q Consensus        76 ~~~i~   80 (92)
                      +..+.
T Consensus       218 ~~~~~  222 (276)
T d1uwha_         218 IIFMV  222 (276)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            33333

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=6.4e-18  Score=95.42  Aligned_cols=80  Identities=15%  Similarity=0.242  Sum_probs=63.7

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC-CHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE-DEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~-~~~~~~~~i~   80 (92)
                      ++++.+||+|||.+... ......+.+||+.|+|||++.+ .++.+.|+||+|+++|++++|..||.+. +...+...+.
T Consensus       149 ~~~~~~Kl~DFGla~~~-~~~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~  226 (270)
T d1t4ha_         149 GPTGSVKIGDLGLATLK-RASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVT  226 (270)
T ss_dssp             STTSCEEECCTTGGGGC-CTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHT
T ss_pred             CCCCCEEEeecCcceec-cCCccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHH
Confidence            35678999999998654 3334456799999999999865 5899999999999999999999999875 4555566666


Q ss_pred             hCC
Q psy8825          81 DHS   83 (92)
Q Consensus        81 ~~~   83 (92)
                      ++.
T Consensus       227 ~~~  229 (270)
T d1t4ha_         227 SGV  229 (270)
T ss_dssp             TTC
T ss_pred             cCC
Confidence            543

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.73  E-value=5.7e-18  Score=97.20  Aligned_cols=81  Identities=17%  Similarity=0.269  Sum_probs=68.0

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc---CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY---QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~---~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~   78 (92)
                      +.++.+||+|||.+.....   ....+||+.|+|||++.+   ..|+.+.|+||+|++++++++|..||.+.+..+.+.+
T Consensus       149 ~~~~~~Kl~DFG~a~~~~~---~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~  225 (309)
T d1u5ra_         149 SEPGLVKLGDFGSASIMAP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH  225 (309)
T ss_dssp             ETTTEEEECCCTTCBSSSS---BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred             CCCCCEEEeecccccccCC---CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence            4678899999999876543   345789999999999864   3578899999999999999999999999988888888


Q ss_pred             HHhCCCc
Q psy8825          79 ITDHSVS   85 (92)
Q Consensus        79 i~~~~~~   85 (92)
                      +.....+
T Consensus       226 i~~~~~~  232 (309)
T d1u5ra_         226 IAQNESP  232 (309)
T ss_dssp             HHHSCCC
T ss_pred             HHhCCCC
Confidence            8876543

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=8.4e-18  Score=95.89  Aligned_cols=81  Identities=19%  Similarity=0.303  Sum_probs=69.0

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      ++++.+||.|||.+...... ....+.+||+.|+|||++... .|+.+.|+||+|++++++++|..||.+.+..+++.+|
T Consensus       134 ~~~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i  213 (299)
T d1ua2a_         134 DENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRI  213 (299)
T ss_dssp             CTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             cCCCccccccCccccccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHH
Confidence            56789999999999776544 345567899999999998654 5799999999999999999999999999998888888


Q ss_pred             HhC
Q psy8825          80 TDH   82 (92)
Q Consensus        80 ~~~   82 (92)
                      .+.
T Consensus       214 ~~~  216 (299)
T d1ua2a_         214 FET  216 (299)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            764

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.3e-18  Score=97.87  Aligned_cols=90  Identities=17%  Similarity=0.291  Sum_probs=73.7

Q ss_pred             CCCCccccCCCccccccCCCC----CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR----GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~----~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~   76 (92)
                      ++++.+|++|||.++.+....    .....+||+.|+|||++....++.+.|+||+|+++||+++ |..||.+.+..++.
T Consensus       143 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~  222 (285)
T d1u59a_         143 VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM  222 (285)
T ss_dssp             EETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHH
T ss_pred             ccCCceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHH
Confidence            457789999999998765432    2334578999999999988889999999999999999997 89999998888888


Q ss_pred             HHHHhCC-CcCCCCCC
Q psy8825          77 AAITDHS-VSYPKMAV   91 (92)
Q Consensus        77 ~~i~~~~-~~~p~~~~   91 (92)
                      ..|.++. +.+|..++
T Consensus       223 ~~i~~~~~~~~p~~~~  238 (285)
T d1u59a_         223 AFIEQGKRMECPPECP  238 (285)
T ss_dssp             HHHHTTCCCCCCTTCC
T ss_pred             HHHHcCCCCCCCCcCC
Confidence            8888764 56666654

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=2.2e-18  Score=97.45  Aligned_cols=71  Identities=20%  Similarity=0.370  Sum_probs=59.2

Q ss_pred             CCCCccccCCCccccccCCC---CCCCCCCcCCcCccchhhccCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCH
Q psy8825           2 GESQPFRERTLSHQDKIRPG---RGSNPRPSAYSILLFQIILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDE   72 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~---~~~~~~~g~~~~~~pe~~~~~~~-~~~~~~ws~g~~~~~~~~g~~p~~~~~~   72 (92)
                      ++++.+||+|||.+......   ....+.+||+.|+|||++.+..+ +.+.|+||+|++++++++|..||.+...
T Consensus       137 ~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~  211 (271)
T d1nvra_         137 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD  211 (271)
T ss_dssp             CTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSST
T ss_pred             CCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCCh
Confidence            56789999999999776433   33556799999999999988776 5778999999999999999999976543

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=7.4e-19  Score=101.31  Aligned_cols=70  Identities=19%  Similarity=0.228  Sum_probs=58.6

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE   72 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~   72 (92)
                      +.++.+||+|||.+..... ....+.+||+.|+|||++.+..|+.+.|+||+|++++++++|..||.+.+.
T Consensus       139 ~~~~~vkl~DFGla~~~~~-~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~  208 (322)
T d1s9ja_         139 NSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA  208 (322)
T ss_dssp             CTTCCEEECCCCCCHHHHH-HTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCT
T ss_pred             CCCCCEEEeeCCCccccCC-CccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH
Confidence            5678999999999876533 334567999999999999999999999999999999999999999987653

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.72  E-value=1.6e-17  Score=94.06  Aligned_cols=88  Identities=24%  Similarity=0.439  Sum_probs=75.6

Q ss_pred             CCCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhcc------CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY------QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEE   74 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~------~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~   74 (92)
                      ++.++.+||+|||.+..+.........+||..|++||.+..      ..++.+.|+|++|++++++++|..||.+.+..+
T Consensus       143 l~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~  222 (277)
T d1phka_         143 LDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML  222 (277)
T ss_dssp             ECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             EcCCCCeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHH
Confidence            35788999999999988877767777899999999999853      345788999999999999999999999999999


Q ss_pred             HHHHHHhCCCcCCC
Q psy8825          75 LFAAITDHSVSYPK   88 (92)
Q Consensus        75 ~~~~i~~~~~~~p~   88 (92)
                      ...+|.+..+.+|.
T Consensus       223 ~~~~i~~~~~~~~~  236 (277)
T d1phka_         223 MLRMIMSGNYQFGS  236 (277)
T ss_dssp             HHHHHHHTCCCCCT
T ss_pred             HHHHHHhCCCCCCC
Confidence            99999988765543

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.4e-18  Score=100.66  Aligned_cols=69  Identities=19%  Similarity=0.354  Sum_probs=61.9

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCH
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE   72 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~   72 (92)
                      .+.+|++|||.+..........+.+||+.|+|||++.+..|+.+.|+||+|++++++++|..||.+.+.
T Consensus       150 ~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~  218 (335)
T d2ozaa1         150 NAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG  218 (335)
T ss_dssp             TCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTC
T ss_pred             cccccccccceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCH
Confidence            567999999999888777777788999999999999888899999999999999999999999977543

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.72  E-value=1.1e-17  Score=95.58  Aligned_cols=90  Identities=13%  Similarity=0.295  Sum_probs=62.9

Q ss_pred             CCCCCccccCCCccccccCCCCCC------CCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGRGS------NPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEE   73 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~~~------~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~   73 (92)
                      +++++.+||+|||.++.+......      ....|++.|+|||.+....++.+.|+||+|+++||+++ |..||.+....
T Consensus       161 l~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~  240 (299)
T d1jpaa_         161 VNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ  240 (299)
T ss_dssp             ECTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred             ECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH
Confidence            357889999999999876544221      12357889999999988889999999999999999997 89999999988


Q ss_pred             HHHHHHHhCC-CcCCCCC
Q psy8825          74 ELFAAITDHS-VSYPKMA   90 (92)
Q Consensus        74 ~~~~~i~~~~-~~~p~~~   90 (92)
                      +++..+.++. ++.|..+
T Consensus       241 ~~~~~i~~~~~~~~~~~~  258 (299)
T d1jpaa_         241 DVINAIEQDYRLPPPMDC  258 (299)
T ss_dssp             HHHHHHHTTCCCCCCTTC
T ss_pred             HHHHHHHcCCCCCCCccc
Confidence            8888887764 4445444

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.7e-18  Score=99.92  Aligned_cols=90  Identities=17%  Similarity=0.297  Sum_probs=70.5

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      ++++.+||+|||.++.......   ..+..||+.|+|||++....++.+.|+||+|+++|++++ |..||.+.+..+.+.
T Consensus       198 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~  277 (325)
T d1rjba_         198 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFY  277 (325)
T ss_dssp             ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH
T ss_pred             ccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            4678899999999977654432   335578999999999998899999999999999999997 899999876666666


Q ss_pred             HHHhCCC--cCCCCCC
Q psy8825          78 AITDHSV--SYPKMAV   91 (92)
Q Consensus        78 ~i~~~~~--~~p~~~~   91 (92)
                      ++.....  +.|..++
T Consensus       278 ~~~~~~~~~~~p~~~~  293 (325)
T d1rjba_         278 KLIQNGFKMDQPFYAT  293 (325)
T ss_dssp             HHHHTTCCCCCCTTCC
T ss_pred             HHHhcCCCCCCCCcCC
Confidence            6666543  4455443

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=4.7e-18  Score=96.27  Aligned_cols=90  Identities=18%  Similarity=0.315  Sum_probs=71.8

Q ss_pred             CCCCccccCCCccccccCCCC----CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR----GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~----~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~   76 (92)
                      ++++.+|++|||.++.+....    ......||+.|+|||.+....++.+.|+||+|+++|++++ |..||.+.+..++.
T Consensus       141 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~  220 (277)
T d1xbba_         141 VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT  220 (277)
T ss_dssp             EETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH
T ss_pred             cccCcccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHH
Confidence            456789999999987765432    2234578999999999988889999999999999999997 89999999988888


Q ss_pred             HHHHhCC-CcCCCCCC
Q psy8825          77 AAITDHS-VSYPKMAV   91 (92)
Q Consensus        77 ~~i~~~~-~~~p~~~~   91 (92)
                      ..|.++. +++|..++
T Consensus       221 ~~i~~~~~~~~p~~~~  236 (277)
T d1xbba_         221 AMLEKGERMGCPAGCP  236 (277)
T ss_dssp             HHHHTTCCCCCCTTCC
T ss_pred             HHHHcCCCCCCCcccC
Confidence            8887754 56666554

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=5.4e-17  Score=91.08  Aligned_cols=89  Identities=16%  Similarity=0.326  Sum_probs=73.2

Q ss_pred             CCCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +++++.+||+|||.+..+....  ......||..|+|||.+....++.+.|+||+|+++|++++ |..||.+.+..++..
T Consensus       133 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~  212 (258)
T d1k2pa_         133 VNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE  212 (258)
T ss_dssp             ECTTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHH
T ss_pred             EcCCCcEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHH
Confidence            3567889999999997765443  2334678999999999998899999999999999999997 899999999999998


Q ss_pred             HHHhCC-CcCCCC
Q psy8825          78 AITDHS-VSYPKM   89 (92)
Q Consensus        78 ~i~~~~-~~~p~~   89 (92)
                      +|.++. ...|..
T Consensus       213 ~i~~~~~~~~p~~  225 (258)
T d1k2pa_         213 HIAQGLRLYRPHL  225 (258)
T ss_dssp             HHHTTCCCCCCTT
T ss_pred             HHHhCCCCCCccc
Confidence            888864 344443

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=5.1e-18  Score=95.83  Aligned_cols=90  Identities=14%  Similarity=0.345  Sum_probs=63.3

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      ++++.+|++|||.++.+....  ......||+.|+|||.+....++.+.|+||+|+++|++++ |.+||.+.+..+++.+
T Consensus       142 ~~~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~  221 (273)
T d1mp8a_         142 SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR  221 (273)
T ss_dssp             EETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH
T ss_pred             cCCCcEEEccchhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            456789999999998765442  3344578899999999998899999999999999999997 8999999888888888


Q ss_pred             HHhCC-CcCCCCCC
Q psy8825          79 ITDHS-VSYPKMAV   91 (92)
Q Consensus        79 i~~~~-~~~p~~~~   91 (92)
                      +.++. +++|..++
T Consensus       222 i~~~~~~~~~~~~~  235 (273)
T d1mp8a_         222 IENGERLPMPPNCP  235 (273)
T ss_dssp             HHTTCCCCCCTTCC
T ss_pred             HHcCCCCCCCCCCC
Confidence            88765 56666654

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.70  E-value=9.6e-18  Score=95.83  Aligned_cols=91  Identities=22%  Similarity=0.415  Sum_probs=72.7

Q ss_pred             CCCCCccccCCCccccccCCC---CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhC-CCCCCCCCHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPG---RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVG-QPPFDGEDEEELF   76 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~---~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g-~~p~~~~~~~~~~   76 (92)
                      +++++.+||+|||.++.....   ....+.+|++.|+|||.+....++.+.|+||+|+++|+++++ .+||.+.+..+++
T Consensus       173 ld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~  252 (301)
T d1lufa_         173 VGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVI  252 (301)
T ss_dssp             ECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH
T ss_pred             ECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHH
Confidence            356788999999998766443   234456889999999999999999999999999999999987 4789999999999


Q ss_pred             HHHHhCCC-cCCCCCC
Q psy8825          77 AAITDHSV-SYPKMAV   91 (92)
Q Consensus        77 ~~i~~~~~-~~p~~~~   91 (92)
                      ..+.++.. .+|..++
T Consensus       253 ~~v~~~~~~~~p~~~~  268 (301)
T d1lufa_         253 YYVRDGNILACPENCP  268 (301)
T ss_dssp             HHHHTTCCCCCCTTCC
T ss_pred             HHHHcCCCCCCCccch
Confidence            88888753 4565554

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.70  E-value=1.8e-17  Score=93.67  Aligned_cols=86  Identities=16%  Similarity=0.232  Sum_probs=64.1

Q ss_pred             CCCCccccCCCccccccCCC----CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG----RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~----~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~   77 (92)
                      +.++..++.|||.+......    ....+.+||+.|+|||++.+..++.+.|+||+|++++++++|..||.+.+..+.+.
T Consensus       145 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~  224 (277)
T d1o6ya_         145 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY  224 (277)
T ss_dssp             ETTSCEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             CccccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHH
Confidence            45677889999987655333    23455689999999999998889999999999999999999999999999888888


Q ss_pred             HHHhCCCcCC
Q psy8825          78 AITDHSVSYP   87 (92)
Q Consensus        78 ~i~~~~~~~p   87 (92)
                      ++.+..+..|
T Consensus       225 ~~~~~~~~~~  234 (277)
T d1o6ya_         225 QHVREDPIPP  234 (277)
T ss_dssp             HHHHCCCCCG
T ss_pred             HHHhcCCCCC
Confidence            8888766544

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=3.4e-17  Score=92.47  Aligned_cols=91  Identities=15%  Similarity=0.295  Sum_probs=72.2

Q ss_pred             CCCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +++++.+||+|||.++......  ......|+..|+|||++....++.+.|+||+|+++|++++ +.+++...+..+++.
T Consensus       142 l~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~  221 (272)
T d1qpca_         142 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ  221 (272)
T ss_dssp             ECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH
T ss_pred             eecccceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            3677899999999998775442  3445678999999999988889999999999999999998 566777778888888


Q ss_pred             HHHhCC-CcCCCCCC
Q psy8825          78 AITDHS-VSYPKMAV   91 (92)
Q Consensus        78 ~i~~~~-~~~p~~~~   91 (92)
                      .+..+. +..|..++
T Consensus       222 ~i~~~~~~~~p~~~~  236 (272)
T d1qpca_         222 NLERGYRMVRPDNCP  236 (272)
T ss_dssp             HHHTTCCCCCCTTCC
T ss_pred             HHHhcCCCCCcccCh
Confidence            887753 45555543

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.2e-17  Score=96.21  Aligned_cols=85  Identities=18%  Similarity=0.349  Sum_probs=75.4

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHS   83 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~~   83 (92)
                      ...+|+.|||.+..........+.+|++.|++||...+..++.+.|+|++|+++|++++|..||.+.+..+++.+|.+..
T Consensus       140 ~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~  219 (321)
T d1tkia_         140 SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAE  219 (321)
T ss_dssp             CCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC
T ss_pred             ceEEEEcccchhhccccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Confidence            34789999999988766666666789999999999988889999999999999999999999999999999999999988


Q ss_pred             CcCCC
Q psy8825          84 VSYPK   88 (92)
Q Consensus        84 ~~~p~   88 (92)
                      +.+|.
T Consensus       220 ~~~~~  224 (321)
T d1tkia_         220 YTFDE  224 (321)
T ss_dssp             CCCCH
T ss_pred             CCCCh
Confidence            77664

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=6.1e-18  Score=97.26  Aligned_cols=90  Identities=18%  Similarity=0.382  Sum_probs=69.8

Q ss_pred             CCCCccccCCCccccccCCCCC---CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG---SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      ++++.+||+|||.+........   .....||..|+|||.+.+..++.+.|+||+|+++|++++ |..||.+.+..++..
T Consensus       145 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~  224 (317)
T d1xkka_         145 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS  224 (317)
T ss_dssp             EETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHH
T ss_pred             CCCCCeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHH
Confidence            4567899999999887654432   233568999999999998899999999999999999998 899999888777777


Q ss_pred             HHHhCC-CcCCCCCC
Q psy8825          78 AITDHS-VSYPKMAV   91 (92)
Q Consensus        78 ~i~~~~-~~~p~~~~   91 (92)
                      .+..+. ++.|..++
T Consensus       225 ~i~~~~~~~~p~~~~  239 (317)
T d1xkka_         225 ILEKGERLPQPPICT  239 (317)
T ss_dssp             HHHHTCCCCCCTTBC
T ss_pred             HHHcCCCCCCCcccC
Confidence            777654 45565544

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=6e-17  Score=91.03  Aligned_cols=89  Identities=19%  Similarity=0.411  Sum_probs=61.7

Q ss_pred             CCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~   78 (92)
                      ++++.+||+|||.++......  ......||..|+|||++....++.+.|+||+|+++|++++ +.+|+...+..+.+..
T Consensus       135 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~  214 (263)
T d1sm2a_         135 GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED  214 (263)
T ss_dssp             CGGGCEEECSCC------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHH
T ss_pred             cCCCCeEecccchheeccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHH
Confidence            567889999999987765442  2334578999999999998899999999999999999998 6778888888888888


Q ss_pred             HHhCC-CcCCCCC
Q psy8825          79 ITDHS-VSYPKMA   90 (92)
Q Consensus        79 i~~~~-~~~p~~~   90 (92)
                      +..+. ...|...
T Consensus       215 i~~~~~~~~p~~~  227 (263)
T d1sm2a_         215 ISTGFRLYKPRLA  227 (263)
T ss_dssp             HHHTCCCCCCTTS
T ss_pred             HHhcCCCCCcccc
Confidence            87764 3444433

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.3e-16  Score=90.48  Aligned_cols=90  Identities=13%  Similarity=0.271  Sum_probs=62.2

Q ss_pred             CCCCCccccCCCccccccCCCC----CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhC-CCCCCCCCHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGR----GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVG-QPPFDGEDEEEL   75 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~----~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g-~~p~~~~~~~~~   75 (92)
                      +++++.+||+|||.++......    ......||..|+|||++....++.+.|+||+|+++|+++++ .+++.+.+..++
T Consensus       143 l~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~  222 (283)
T d1mqba_         143 VNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV  222 (283)
T ss_dssp             ECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred             ECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHH
Confidence            3577899999999997765432    22334689999999999988999999999999999999984 556666777777


Q ss_pred             HHHHHhCC-CcCCCCC
Q psy8825          76 FAAITDHS-VSYPKMA   90 (92)
Q Consensus        76 ~~~i~~~~-~~~p~~~   90 (92)
                      +..+..+. ++.|..+
T Consensus       223 ~~~i~~~~~~~~~~~~  238 (283)
T d1mqba_         223 MKAINDGFRLPTPMDC  238 (283)
T ss_dssp             HHHHHTTCCCCCCTTC
T ss_pred             HHHHhccCCCCCchhh
Confidence            77766653 3444443

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=3.3e-17  Score=93.42  Aligned_cols=91  Identities=16%  Similarity=0.289  Sum_probs=62.4

Q ss_pred             CCCCCccccCCCccccccCCC---CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhC-CCCCCCCCHHHH-
Q psy8825           1 MGESQPFRERTLSHQDKIRPG---RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVG-QPPFDGEDEEEL-   75 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~---~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g-~~p~~~~~~~~~-   75 (92)
                      +++++.+||+|||.++.....   ....+.+||+.|+|||++.+..++.+.|+||+|+++++++++ ..||.+.+..+. 
T Consensus       167 l~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~  246 (299)
T d1ywna1         167 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF  246 (299)
T ss_dssp             ECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHH
T ss_pred             ECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            356789999999999765443   234456899999999999999999999999999999999985 568877654333 


Q ss_pred             HHHHHhC-CCcCCCCCC
Q psy8825          76 FAAITDH-SVSYPKMAV   91 (92)
Q Consensus        76 ~~~i~~~-~~~~p~~~~   91 (92)
                      ...+.++ .+..|..++
T Consensus       247 ~~~~~~~~~~~~~~~~~  263 (299)
T d1ywna1         247 CRRLKEGTRMRAPDYTT  263 (299)
T ss_dssp             HHHHHHTCCCCCCTTCC
T ss_pred             HHHHhcCCCCCCCccCC
Confidence            3334443 355555544

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.65  E-value=1.1e-16  Score=91.05  Aligned_cols=91  Identities=16%  Similarity=0.323  Sum_probs=68.3

Q ss_pred             CCCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCC-CCCCCCCHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQ-PPFDGEDEEELFA   77 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~-~p~~~~~~~~~~~   77 (92)
                      +++++.+||+|||.++......  ......|+..|+|||++.+..|+.+.|+||+|+++|+++++. +++.+.+..++..
T Consensus       148 l~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~  227 (287)
T d1opja_         148 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE  227 (287)
T ss_dssp             ECGGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH
T ss_pred             ECCCCcEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHH
Confidence            3567889999999997765442  223345888999999999999999999999999999999955 5556666666666


Q ss_pred             HHHhC-CCcCCCCCC
Q psy8825          78 AITDH-SVSYPKMAV   91 (92)
Q Consensus        78 ~i~~~-~~~~p~~~~   91 (92)
                      .+..+ .+++|..++
T Consensus       228 ~i~~~~~~~~~~~~~  242 (287)
T d1opja_         228 LLEKDYRMERPEGCP  242 (287)
T ss_dssp             HHHTTCCCCCCTTCC
T ss_pred             HHhcCCCCCCCccch
Confidence            65554 345555554

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=7.9e-17  Score=92.29  Aligned_cols=90  Identities=19%  Similarity=0.281  Sum_probs=71.2

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhC-CCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVG-QPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g-~~p~~~~~~~~~~~~i~   80 (92)
                      ++++.+||.|||.++............||..|++||.+....++.+.|+||+|+++++++++ .+||.+.+..+++..|.
T Consensus       161 ~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~  240 (309)
T d1fvra_         161 GENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP  240 (309)
T ss_dssp             CGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGG
T ss_pred             cCCCceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence            56678899999999776655555667899999999999988899999999999999999995 56899999889888887


Q ss_pred             hC-CCcCCCCCC
Q psy8825          81 DH-SVSYPKMAV   91 (92)
Q Consensus        81 ~~-~~~~p~~~~   91 (92)
                      ++ .+.+|..++
T Consensus       241 ~~~~~~~~~~~~  252 (309)
T d1fvra_         241 QGYRLEKPLNCD  252 (309)
T ss_dssp             GTCCCCCCTTBC
T ss_pred             hcCCCCCCccCC
Confidence            75 355555443

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=3e-16  Score=88.58  Aligned_cols=81  Identities=20%  Similarity=0.357  Sum_probs=63.8

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH   82 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~~   82 (92)
                      .+.+|+.|||.+... ......+.+||+.|+|||++.+..+ +.+.|+||+|++++++++|..||.+.+      .+.+.
T Consensus       147 ~~~vkl~DFG~a~~~-~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~i~~~  219 (273)
T d1xwsa_         147 RGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRG  219 (273)
T ss_dssp             TTEEEECCCTTCEEC-CSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHC
T ss_pred             CCeEEECccccceec-ccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch------HHhhc
Confidence            368999999998654 3344567899999999999987765 567899999999999999999997632      35566


Q ss_pred             CCcCCCCCC
Q psy8825          83 SVSYPKMAV   91 (92)
Q Consensus        83 ~~~~p~~~~   91 (92)
                      ...+|..++
T Consensus       220 ~~~~~~~~s  228 (273)
T d1xwsa_         220 QVFFRQRVS  228 (273)
T ss_dssp             CCCCSSCCC
T ss_pred             ccCCCCCCC
Confidence            666666554

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=4.6e-16  Score=89.20  Aligned_cols=85  Identities=18%  Similarity=0.267  Sum_probs=68.4

Q ss_pred             CCCCccccCCCccccccCCC-----CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-----RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-----~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~   75 (92)
                      ++++.+|+.|||.+......     ....+.+||+.|++||++.+. .++.+.|+||+|++++++++|..||.+.+..+.
T Consensus       151 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~  230 (318)
T d3blha1         151 TRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ  230 (318)
T ss_dssp             CTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             cCCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHH
Confidence            56788999999998766532     233446899999999998755 578999999999999999999999999888888


Q ss_pred             HHHHHhCCCcC
Q psy8825          76 FAAITDHSVSY   86 (92)
Q Consensus        76 ~~~i~~~~~~~   86 (92)
                      ...+.+....+
T Consensus       231 ~~~i~~~~~~~  241 (318)
T d3blha1         231 LALISQLCGSI  241 (318)
T ss_dssp             HHHHHHHHCCC
T ss_pred             HHHHHHhcCCC
Confidence            77776654433

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.5e-16  Score=89.86  Aligned_cols=85  Identities=15%  Similarity=0.327  Sum_probs=67.9

Q ss_pred             CCCCccccCCCccccccCCCCC----CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG----SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~----~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~   76 (92)
                      ..+..+|++|||.+........    .....|+..|+|||.+.+..++.+.|+||+|+++|++++ |..||.+.+..+.+
T Consensus       145 ~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~  224 (273)
T d1u46a_         145 ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL  224 (273)
T ss_dssp             EETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred             ccccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHH
Confidence            3466789999999987754432    233467889999999998888999999999999999997 89999999999999


Q ss_pred             HHHHhCCCcC
Q psy8825          77 AAITDHSVSY   86 (92)
Q Consensus        77 ~~i~~~~~~~   86 (92)
                      .+|.+...++
T Consensus       225 ~~i~~~~~~~  234 (273)
T d1u46a_         225 HKIDKEGERL  234 (273)
T ss_dssp             HHHHTSCCCC
T ss_pred             HHHHhCCCCC
Confidence            9998876543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=8.5e-16  Score=87.64  Aligned_cols=90  Identities=20%  Similarity=0.376  Sum_probs=72.9

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++..||+|||.+.......   ......|++.|++||.+....|+.+.|+|++|+++|++++ |.+||.+.+..++..
T Consensus       169 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~  248 (299)
T d1fgka_         169 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK  248 (299)
T ss_dssp             CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH
T ss_pred             cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHH
Confidence            567889999999987765443   3344678999999999998999999999999999999997 789999988888877


Q ss_pred             HHHhC-CCcCCCCCC
Q psy8825          78 AITDH-SVSYPKMAV   91 (92)
Q Consensus        78 ~i~~~-~~~~p~~~~   91 (92)
                      .+..+ .+..|.+++
T Consensus       249 ~i~~~~~~~~p~~~~  263 (299)
T d1fgka_         249 LLKEGHRMDKPSNCT  263 (299)
T ss_dssp             HHHTTCCCCCCSSCC
T ss_pred             HHHcCCCCCCCccch
Confidence            77665 355565544

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.62  E-value=3.4e-16  Score=89.09  Aligned_cols=67  Identities=15%  Similarity=0.120  Sum_probs=57.1

Q ss_pred             CCccccCCCccccccCCC--------CCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           4 SQPFRERTLSHQDKIRPG--------RGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~--------~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      ++.+|+.|||.+......        ....+.+||+.|+|||++.+..++.+.|+||+|++++++++|..||.+.
T Consensus       142 ~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~  216 (293)
T d1csna_         142 ANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL  216 (293)
T ss_dssp             TTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             CCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCc
Confidence            467899999998776432        1244568999999999999888999999999999999999999999764

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=6.4e-16  Score=87.75  Aligned_cols=91  Identities=18%  Similarity=0.314  Sum_probs=65.4

Q ss_pred             CCCCCccccCCCccccccCCCC--CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGR--GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +++++.+||+|||.++......  ......|++.|+|||.+....++.+.|+||+|+++|++++ +.+++.+....+.+.
T Consensus       146 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~  225 (285)
T d1fmka3         146 VGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD  225 (285)
T ss_dssp             ECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH
T ss_pred             ECCCCcEEEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            3567889999999987664332  3334578999999999998899999999999999999998 556677777888888


Q ss_pred             HHHhCC-CcCCCCCC
Q psy8825          78 AITDHS-VSYPKMAV   91 (92)
Q Consensus        78 ~i~~~~-~~~p~~~~   91 (92)
                      .+.++. .+.|..++
T Consensus       226 ~i~~~~~~~~~~~~~  240 (285)
T d1fmka3         226 QVERGYRMPCPPECP  240 (285)
T ss_dssp             HHHTTCCCCCCTTSC
T ss_pred             HHHhcCCCCCCcccC
Confidence            877653 45555543

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.3e-15  Score=88.46  Aligned_cols=77  Identities=21%  Similarity=0.355  Sum_probs=67.3

Q ss_pred             CccccCCCccccccCCCCCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           5 QPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         5 ~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      ..+||.|||.+..........+.+|+..|++||.+.+ ..++.+.|+||+|++++++++|..||.+.+..+++.+|.+
T Consensus       160 ~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~  237 (350)
T d1q5ka_         160 AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK  237 (350)
T ss_dssp             CCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHH
T ss_pred             CceeEecccchhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHH
Confidence            3789999999988877777778899999999998765 4689999999999999999999999999888888777754

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=8e-16  Score=87.67  Aligned_cols=81  Identities=17%  Similarity=0.235  Sum_probs=67.8

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQPY-GKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~-~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      +.++.+|+.|||.+...... .......||+.|++||.+....+ +.+.|+||+|++++++++|..||.+.+..+.+.++
T Consensus       136 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i  215 (298)
T d1gz8a_         136 NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI  215 (298)
T ss_dssp             CTTSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             cccCcceeccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHH
Confidence            56788999999998777543 45556789999999999876654 78899999999999999999999999888887777


Q ss_pred             HhC
Q psy8825          80 TDH   82 (92)
Q Consensus        80 ~~~   82 (92)
                      .+.
T Consensus       216 ~~~  218 (298)
T d1gz8a_         216 FRT  218 (298)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            653

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.61  E-value=7.5e-16  Score=87.71  Aligned_cols=69  Identities=14%  Similarity=0.110  Sum_probs=57.5

Q ss_pred             CCccccCCCccccccCCCC--------CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCH
Q psy8825           4 SQPFRERTLSHQDKIRPGR--------GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDE   72 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~--------~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~   72 (92)
                      +..+|++|||.+.......        ...+.+||+.|+|||.+.+..++.+.|+||+|++++++++|..||.+...
T Consensus       142 ~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~  218 (299)
T d1ckia_         142 GNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKA  218 (299)
T ss_dssp             TTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-
T ss_pred             CceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccch
Confidence            4568999999987764332        23456899999999999988899999999999999999999999987544

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.1e-15  Score=87.50  Aligned_cols=91  Identities=13%  Similarity=0.246  Sum_probs=73.4

Q ss_pred             CCCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhC-CCCCCCCCHHHHH
Q psy8825           1 MGESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVG-QPPFDGEDEEELF   76 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g-~~p~~~~~~~~~~   76 (92)
                      ++++..+||+|||.+..+....   ......|++.|++||.+....++.+.|+||+|+++++++++ ..||.+.+..+.+
T Consensus       166 ld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~  245 (308)
T d1p4oa_         166 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL  245 (308)
T ss_dssp             ECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHH
T ss_pred             ecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            3577889999999987664332   23445789999999999988899999999999999999997 5899999999998


Q ss_pred             HHHHhCC-CcCCCCCC
Q psy8825          77 AAITDHS-VSYPKMAV   91 (92)
Q Consensus        77 ~~i~~~~-~~~p~~~~   91 (92)
                      ..+.++. +..|..++
T Consensus       246 ~~i~~~~~~~~p~~~~  261 (308)
T d1p4oa_         246 RFVMEGGLLDKPDNCP  261 (308)
T ss_dssp             HHHHTTCCCCCCTTCC
T ss_pred             HHHHhCCCCCCcccch
Confidence            8888765 34555544

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=1.7e-15  Score=85.06  Aligned_cols=88  Identities=11%  Similarity=0.259  Sum_probs=65.0

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+|+.|||.++....  ......++..|+|||.+.+..++.+.|+||+|+++|++++ |.+|+...+..++...|.
T Consensus       137 ~~~~~~kl~dfg~s~~~~~--~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~  214 (262)
T d1byga_         137 SEDNVAKVSDFGLTKEASS--TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE  214 (262)
T ss_dssp             CTTSCEEECCCCC--------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHT
T ss_pred             cCCCCEeecccccceecCC--CCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Confidence            5678899999999865433  3345578899999999988889999999999999999997 789999888888888887


Q ss_pred             hC-CCcCCCCCC
Q psy8825          81 DH-SVSYPKMAV   91 (92)
Q Consensus        81 ~~-~~~~p~~~~   91 (92)
                      ++ .+++|..++
T Consensus       215 ~~~~~~~~~~~~  226 (262)
T d1byga_         215 KGYKMDAPDGCP  226 (262)
T ss_dssp             TTCCCCCCTTCC
T ss_pred             cCCCCCCCccCC
Confidence            64 456666544

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=4.3e-15  Score=86.02  Aligned_cols=80  Identities=19%  Similarity=0.290  Sum_probs=66.1

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+|+.|||.+.....  .....+||+.|+|||++.+. .++.+.|+||+|++++++++|..||.+.+..+.+.++.
T Consensus       155 ~~~~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~  232 (346)
T d1cm8a_         155 NEDCELKILDFGLARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIM  232 (346)
T ss_dssp             CTTCCEEECCCTTCEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             ccccccccccccceeccCC--ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHH
Confidence            5788999999999976543  34567899999999998764 45889999999999999999999999988877776665


Q ss_pred             hCC
Q psy8825          81 DHS   83 (92)
Q Consensus        81 ~~~   83 (92)
                      ...
T Consensus       233 ~~~  235 (346)
T d1cm8a_         233 KVT  235 (346)
T ss_dssp             HHH
T ss_pred             hcc
Confidence            543

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=4.7e-15  Score=85.36  Aligned_cols=91  Identities=21%  Similarity=0.377  Sum_probs=68.1

Q ss_pred             CCCCCccccCCCccccccCCC--CCCCCCCcCCcCccchhhccC--CCCchhhHHhHHHHHHHHHhCCCCCCCCC----H
Q psy8825           1 MGESQPFRERTLSHQDKIRPG--RGSNPRPSAYSILLFQIILYQ--PYGKSVDWWAYGVLLYEMLVGQPPFDGED----E   72 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~--~~~~~~~g~~~~~~pe~~~~~--~~~~~~~~ws~g~~~~~~~~g~~p~~~~~----~   72 (92)
                      ++.++.+||+|||.+..+...  ....+..|++.|++||.+...  .++.+.|+||+|++++++++|..||.+..    .
T Consensus       162 l~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~  241 (322)
T d1vzoa_         162 LDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ  241 (322)
T ss_dssp             ECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCH
T ss_pred             ecCCCCEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            356789999999998766433  334556899999999998754  35778999999999999999999997753    3


Q ss_pred             HHHHHHHHhCCCcCCCCCC
Q psy8825          73 EELFAAITDHSVSYPKMAV   91 (92)
Q Consensus        73 ~~~~~~i~~~~~~~p~~~~   91 (92)
                      ..+........+++|...+
T Consensus       242 ~~i~~~~~~~~~~~~~~~s  260 (322)
T d1vzoa_         242 AEISRRILKSEPPYPQEMS  260 (322)
T ss_dssp             HHHHHHHHHCCCCCCTTSC
T ss_pred             HHHHHhcccCCCCCcccCC
Confidence            4445555566677776654

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=6.1e-15  Score=85.74  Aligned_cols=80  Identities=16%  Similarity=0.205  Sum_probs=58.2

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITD   81 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~~   81 (92)
                      +.++..|+.|||.+............+||+.|+|||++.+..++.+.|+||+|++++++++|..||.+.+......++..
T Consensus       153 ~~~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~  232 (355)
T d2b1pa1         153 KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE  232 (355)
T ss_dssp             CTTCCEEECCCCC---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             ccccceeeechhhhhccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHH
Confidence            45778899999998887777777778999999999999988899999999999999999999999999887777666654

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.55  E-value=3.9e-15  Score=84.27  Aligned_cols=80  Identities=16%  Similarity=0.276  Sum_probs=62.6

Q ss_pred             CCCCccccCCCccccccCCC-CCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG-RGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAI   79 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i   79 (92)
                      ++++.+|+.|||.+...... .......|++.|++||.+... .++.+.|+|++|++++++++|..||.+.+..+++.++
T Consensus       134 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i  213 (286)
T d1ob3a_         134 NREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRI  213 (286)
T ss_dssp             CTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             cCCCCEEecccccceecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            57789999999998776543 344556789999999998755 4589999999999999999999999998888887777


Q ss_pred             Hh
Q psy8825          80 TD   81 (92)
Q Consensus        80 ~~   81 (92)
                      ..
T Consensus       214 ~~  215 (286)
T d1ob3a_         214 FR  215 (286)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.2e-14  Score=84.21  Aligned_cols=79  Identities=22%  Similarity=0.280  Sum_probs=63.6

Q ss_pred             CCCCccccCCCccccccCCC----CCCCCCCcCCcCccchhhcc-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPG----RGSNPRPSAYSILLFQIILY-QPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELF   76 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~----~~~~~~~g~~~~~~pe~~~~-~~~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~   76 (92)
                      +.++.+||.|||.+......    ......+|++.|++||++.. ..++.+.|+||+|++++++++|..||.+.+..+..
T Consensus       143 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~  222 (345)
T d1pmea_         143 NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL  222 (345)
T ss_dssp             CTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             CCCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHH
Confidence            56789999999998766443    23455689999999999844 45688999999999999999999999988776665


Q ss_pred             HHHH
Q psy8825          77 AAIT   80 (92)
Q Consensus        77 ~~i~   80 (92)
                      ..+.
T Consensus       223 ~~~~  226 (345)
T d1pmea_         223 NHIL  226 (345)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            5544

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=4.3e-14  Score=80.97  Aligned_cols=89  Identities=12%  Similarity=0.206  Sum_probs=63.2

Q ss_pred             CCCCccccCCCccccccCCCCC-----CCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCC-CCHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG-----SNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDG-EDEEEL   75 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~-----~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~-~~~~~~   75 (92)
                      +++..+||+|||.+........     .....||..|++||.+....++.+.|+||+|+++++++++..|+.. .+..+.
T Consensus       164 ~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~  243 (311)
T d1r0pa_         164 DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI  243 (311)
T ss_dssp             CTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------C
T ss_pred             CCCCCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHH
Confidence            5678899999999877654321     2234688999999999888899999999999999999996665544 445556


Q ss_pred             HHHHHhCC-CcCCCCC
Q psy8825          76 FAAITDHS-VSYPKMA   90 (92)
Q Consensus        76 ~~~i~~~~-~~~p~~~   90 (92)
                      ...+.++. +..|..+
T Consensus       244 ~~~i~~g~~~~~p~~~  259 (311)
T d1r0pa_         244 TVYLLQGRRLLQPEYC  259 (311)
T ss_dssp             HHHHHTTCCCCCCTTC
T ss_pred             HHHHHcCCCCCCcccC
Confidence            66666653 3444443

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=8e-15  Score=83.95  Aligned_cols=81  Identities=16%  Similarity=0.302  Sum_probs=63.8

Q ss_pred             CCCCccccCCCccccccCCCC---CCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGR---GSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLV-GQPPFDGEDEEELFA   77 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~-g~~p~~~~~~~~~~~   77 (92)
                      +.++.+|+.|||.++......   .....+||+.|+|||.+....++.+.|+||+|++++++++ |.+++.+.+..+.+.
T Consensus       179 ~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~  258 (311)
T d1t46a_         179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY  258 (311)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHH
T ss_pred             cccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            456788999999998775432   2334678999999999998889999999999999999998 677787766655555


Q ss_pred             HHHhC
Q psy8825          78 AITDH   82 (92)
Q Consensus        78 ~i~~~   82 (92)
                      ++.+.
T Consensus       259 ~~i~~  263 (311)
T d1t46a_         259 KMIKE  263 (311)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            55443

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=2.1e-14  Score=81.98  Aligned_cols=67  Identities=12%  Similarity=0.052  Sum_probs=51.0

Q ss_pred             CCCCCccccCCCccccccCCCC-----CCCCCCcCCcCccchhhccCC------CCchhhHHhHHHHHHHHHhCCCCC
Q psy8825           1 MGESQPFRERTLSHQDKIRPGR-----GSNPRPSAYSILLFQIILYQP------YGKSVDWWAYGVLLYEMLVGQPPF   67 (92)
Q Consensus         1 ~~~~~~~~l~d~~~~~~~~~~~-----~~~~~~g~~~~~~pe~~~~~~------~~~~~~~ws~g~~~~~~~~g~~p~   67 (92)
                      ++.++.+||+|||++.......     .....+||+.|+|||.+....      ++.+.|+||+|+++|++++|..|+
T Consensus       141 l~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~  218 (303)
T d1vjya_         141 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG  218 (303)
T ss_dssp             ECTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBT
T ss_pred             EcCCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCC
Confidence            3577899999999887764432     334568999999999986532      456789999999999999987665

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.42  E-value=4e-13  Score=77.16  Aligned_cols=75  Identities=20%  Similarity=0.309  Sum_probs=61.2

Q ss_pred             CCccccCCCccccccCCCCCCCCCCcCCcCccchhhccC-CCCchhhHHhHHHHHHHHHhCCCCCCCC-CHHHHHHH
Q psy8825           4 SQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQ-PYGKSVDWWAYGVLLYEMLVGQPPFDGE-DEEELFAA   78 (92)
Q Consensus         4 ~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~~~ws~g~~~~~~~~g~~p~~~~-~~~~~~~~   78 (92)
                      ...+|+.|||.+............+||+.|++||.+... .++.+.|+|++|+++++++.|..||... +..++...
T Consensus       166 ~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~  242 (328)
T d3bqca1         166 HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR  242 (328)
T ss_dssp             TTEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHH
T ss_pred             CCeeeecccccceeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHH
Confidence            346899999999888777777788999999999998765 4689999999999999999999998754 44444333

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=9.5e-14  Score=80.27  Aligned_cols=80  Identities=19%  Similarity=0.264  Sum_probs=62.4

Q ss_pred             CCCCccccCCCccccccCCCCCCCCCCcCCcCccchhhccCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQP-YGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAIT   80 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~-~~~~~~~ws~g~~~~~~~~g~~p~~~~~~~~~~~~i~   80 (92)
                      +.++.+|+.|||.+...  .....+..|++.|++||...... ++.+.|+|++|++++++++|..||.+.+.......|.
T Consensus       155 ~~~~~~kl~dfg~a~~~--~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~  232 (348)
T d2gfsa1         155 NEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL  232 (348)
T ss_dssp             CTTCCEEECCC----CC--TGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             cccccccccccchhccc--CcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            56788999999998543  34455678999999999876654 5788999999999999999999999998887777776


Q ss_pred             hCC
Q psy8825          81 DHS   83 (92)
Q Consensus        81 ~~~   83 (92)
                      ...
T Consensus       233 ~~~  235 (348)
T d2gfsa1         233 RLV  235 (348)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            543

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=3.9e-12  Score=71.76  Aligned_cols=81  Identities=12%  Similarity=0.201  Sum_probs=61.7

Q ss_pred             CCCCccccCCCccccccCCCCC-CCCCCcCCcCccchhhccCC-CCchhhHHhHHHHHHHHHhCCCCC-CCCCHHHHHHH
Q psy8825           2 GESQPFRERTLSHQDKIRPGRG-SNPRPSAYSILLFQIILYQP-YGKSVDWWAYGVLLYEMLVGQPPF-DGEDEEELFAA   78 (92)
Q Consensus         2 ~~~~~~~l~d~~~~~~~~~~~~-~~~~~g~~~~~~pe~~~~~~-~~~~~~~ws~g~~~~~~~~g~~p~-~~~~~~~~~~~   78 (92)
                      ..++.+|+.|||.+........ .....++..|++||.+.... ++.+.|+||+|++++++++|..|| .+.+..+.+.+
T Consensus       135 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~  214 (292)
T d1unla_         135 NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKR  214 (292)
T ss_dssp             CTTCCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHH
T ss_pred             ccCCceeeeecchhhcccCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHH
Confidence            4567889999999988765443 33446678889999887655 588999999999999999988775 55666666666


Q ss_pred             HHhC
Q psy8825          79 ITDH   82 (92)
Q Consensus        79 i~~~   82 (92)
                      +...
T Consensus       215 ~~~~  218 (292)
T d1unla_         215 IFRL  218 (292)
T ss_dssp             HHHH
T ss_pred             HHhh
Confidence            6543

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.26  E-value=2.9e-12  Score=74.21  Aligned_cols=63  Identities=16%  Similarity=0.296  Sum_probs=52.3

Q ss_pred             ccccCCCccccccCCCCCCCCCCcCCcCccchhhccCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Q psy8825           6 PFRERTLSHQDKIRPGRGSNPRPSAYSILLFQIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGE   70 (92)
Q Consensus         6 ~~~l~d~~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~~~ws~g~~~~~~~~g~~p~~~~   70 (92)
                      .+++.|||.+....  ......+||+.|++||++....++.+.|+|++|++++++++|..||...
T Consensus       170 ~~kl~dfg~s~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~  232 (362)
T d1q8ya_         170 QIKIADLGNACWYD--EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD  232 (362)
T ss_dssp             EEEECCCTTCEETT--BCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             eeeEeecccccccc--cccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCC
Confidence            47899999986543  3345678999999999999888999999999999999999999999754