BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8829
(205 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1QQW|A Chain A, Crystal Structure Of Human Erythrocyte Catalase
pdb|1QQW|B Chain B, Crystal Structure Of Human Erythrocyte Catalase
pdb|1QQW|C Chain C, Crystal Structure Of Human Erythrocyte Catalase
pdb|1QQW|D Chain D, Crystal Structure Of Human Erythrocyte Catalase
pdb|1F4J|A Chain A, Structure Of Tetragonal Crystals Of Human Erythrocyte
Catalase
pdb|1F4J|B Chain B, Structure Of Tetragonal Crystals Of Human Erythrocyte
Catalase
pdb|1F4J|C Chain C, Structure Of Tetragonal Crystals Of Human Erythrocyte
Catalase
pdb|1F4J|D Chain D, Structure Of Tetragonal Crystals Of Human Erythrocyte
Catalase
Length = 527
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 85/126 (67%), Gaps = 1/126 (0%)
Query: 81 FIQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANYQRDAPMAI-DNQNGAPNYYPNSF 139
+QGRL +Y DTH HRLG N+ IPVNCPYR RVANYQRD PM + DNQ GAPNYYPNSF
Sbjct: 350 MLQGRLFAYPDTHRHRLGPNYLHIPVNCPYRARVANYQRDGPMCMQDNQGGAPNYYPNSF 409
Query: 140 KGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDAARDRMTTNIASVLKL 199
PE P + +G+V+R+ T ++DN +Q R + NVL++ R R+ NIA LK
Sbjct: 410 GAPEQQPSALEHSIQYSGEVRRFNTANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLKD 469
Query: 200 AAPFIQ 205
A FIQ
Sbjct: 470 AQIFIQ 475
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 4 DNQNGAPNYYPNSFKGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDAA 63
DNQ GAPNYYPNSF PE P + +G+V+R+ T ++DN +Q R + NVL++
Sbjct: 396 DNQGGAPNYYPNSFGAPEQQPSALEHSIQYSGEVRRFNTANDDNVTQVRAFYVNVLNEEQ 455
Query: 64 RDRMTTNIASVLKLAAPFIQGR-------LHSYIDTHIHRLGANFN 102
R R+ NIA LK A FIQ + +H +HI L +N
Sbjct: 456 RKRLCENIAGHLKDAQIFIQKKAVKNFTEVHPDYGSHIQALLDKYN 501
>pdb|1DGH|B Chain B, Human Erythrocyte Catalase 3-Amino-1,2,4-Triazole Complex
pdb|1DGH|D Chain D, Human Erythrocyte Catalase 3-Amino-1,2,4-Triazole Complex
Length = 498
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 85/125 (68%), Gaps = 1/125 (0%)
Query: 82 IQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANYQRDAPMAI-DNQNGAPNYYPNSFK 140
+QGRL +Y DTH HRLG N+ IPVNCPYR RVANYQRD PM + DNQ GAPNYYPNSF
Sbjct: 348 LQGRLFAYPDTHRHRLGPNYLHIPVNCPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFG 407
Query: 141 GPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDAARDRMTTNIASVLKLA 200
PE P + +G+V+R+ T ++DN +Q R + NVL++ R R+ NIA LK A
Sbjct: 408 APEQQPSALEHSIQYSGEVRRFNTANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLKDA 467
Query: 201 APFIQ 205
FIQ
Sbjct: 468 QIFIQ 472
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 4 DNQNGAPNYYPNSFKGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDAA 63
DNQ GAPNYYPNSF PE P + +G+V+R+ T ++DN +Q R + NVL++
Sbjct: 393 DNQGGAPNYYPNSFGAPEQQPSALEHSIQYSGEVRRFNTANDDNVTQVRAFYVNVLNEEQ 452
Query: 64 RDRMTTNIASVLKLAAPFIQGR-------LHSYIDTHIHRLGANFN 102
R R+ NIA LK A FIQ + +H +HI L +N
Sbjct: 453 RKRLCENIAGHLKDAQIFIQKKAVKNFTEVHPDYGSHIQALLDKYN 498
>pdb|1DGH|A Chain A, Human Erythrocyte Catalase 3-Amino-1,2,4-Triazole Complex
pdb|1DGH|C Chain C, Human Erythrocyte Catalase 3-Amino-1,2,4-Triazole Complex
pdb|1DGB|A Chain A, Human Erythrocyte Catalase
pdb|1DGB|B Chain B, Human Erythrocyte Catalase
pdb|1DGB|C Chain C, Human Erythrocyte Catalase
pdb|1DGB|D Chain D, Human Erythrocyte Catalase
Length = 498
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 85/125 (68%), Gaps = 1/125 (0%)
Query: 82 IQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANYQRDAPMAI-DNQNGAPNYYPNSFK 140
+QGRL +Y DTH HRLG N+ IPVNCPYR RVANYQRD PM + DNQ GAPNYYPNSF
Sbjct: 348 LQGRLFAYPDTHRHRLGPNYLHIPVNCPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFG 407
Query: 141 GPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDAARDRMTTNIASVLKLA 200
PE P + +G+V+R+ T ++DN +Q R + NVL++ R R+ NIA LK A
Sbjct: 408 APEQQPSALEHSIQYSGEVRRFNTANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLKDA 467
Query: 201 APFIQ 205
FIQ
Sbjct: 468 QIFIQ 472
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 4 DNQNGAPNYYPNSFKGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDAA 63
DNQ GAPNYYPNSF PE P + +G+V+R+ T ++DN +Q R + NVL++
Sbjct: 393 DNQGGAPNYYPNSFGAPEQQPSALEHSIQYSGEVRRFNTANDDNVTQVRAFYVNVLNEEQ 452
Query: 64 RDRMTTNIASVLKLAAPFIQGR-------LHSYIDTHIHRLGANFN 102
R R+ NIA LK A FIQ + +H +HI L +N
Sbjct: 453 RKRLCENIAGHLKDAQIFIQKKAVKNFTEVHPDYGSHIQALLDKYN 498
>pdb|1DGG|A Chain A, Human Erythrocyte Catalse Cyanide Complex
pdb|1DGG|B Chain B, Human Erythrocyte Catalse Cyanide Complex
pdb|1DGG|C Chain C, Human Erythrocyte Catalse Cyanide Complex
pdb|1DGG|D Chain D, Human Erythrocyte Catalse Cyanide Complex
pdb|1DGF|A Chain A, Human Erythrocyte Catalase
pdb|1DGF|B Chain B, Human Erythrocyte Catalase
pdb|1DGF|C Chain C, Human Erythrocyte Catalase
pdb|1DGF|D Chain D, Human Erythrocyte Catalase
Length = 497
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 85/125 (68%), Gaps = 1/125 (0%)
Query: 82 IQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANYQRDAPMAI-DNQNGAPNYYPNSFK 140
+QGRL +Y DTH HRLG N+ IPVNCPYR RVANYQRD PM + DNQ GAPNYYPNSF
Sbjct: 347 LQGRLFAYPDTHRHRLGPNYLHIPVNCPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFG 406
Query: 141 GPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDAARDRMTTNIASVLKLA 200
PE P + +G+V+R+ T ++DN +Q R + NVL++ R R+ NIA LK A
Sbjct: 407 APEQQPSALEHSIQYSGEVRRFNTANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLKDA 466
Query: 201 APFIQ 205
FIQ
Sbjct: 467 QIFIQ 471
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 4 DNQNGAPNYYPNSFKGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDAA 63
DNQ GAPNYYPNSF PE P + +G+V+R+ T ++DN +Q R + NVL++
Sbjct: 392 DNQGGAPNYYPNSFGAPEQQPSALEHSIQYSGEVRRFNTANDDNVTQVRAFYVNVLNEEQ 451
Query: 64 RDRMTTNIASVLKLAAPFIQGR-------LHSYIDTHIHRLGANFN 102
R R+ NIA LK A FIQ + +H +HI L +N
Sbjct: 452 RKRLCENIAGHLKDAQIFIQKKAVKNFTEVHPDYGSHIQALLDKYN 497
>pdb|3NWL|A Chain A, The Crystal Structure Of The P212121 Form Of Bovine Liver
Catalase Previously Characterized By Electron Microscopy
pdb|3NWL|B Chain B, The Crystal Structure Of The P212121 Form Of Bovine Liver
Catalase Previously Characterized By Electron Microscopy
pdb|3NWL|C Chain C, The Crystal Structure Of The P212121 Form Of Bovine Liver
Catalase Previously Characterized By Electron Microscopy
pdb|3NWL|D Chain D, The Crystal Structure Of The P212121 Form Of Bovine Liver
Catalase Previously Characterized By Electron Microscopy
Length = 527
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 85/126 (67%), Gaps = 1/126 (0%)
Query: 81 FIQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANYQRDAPMA-IDNQNGAPNYYPNSF 139
+QGRL +Y DTH HRLG N+ QIPVNCPYR RVANYQRD PM +DNQ GAPNYYPNSF
Sbjct: 350 MLQGRLFAYPDTHRHRLGPNYLQIPVNCPYRARVANYQRDGPMCMMDNQGGAPNYYPNSF 409
Query: 140 KGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDAARDRMTTNIASVLKL 199
PE P + +GDV+R+ + ++DN +Q R + VL++ R R+ NIA LK
Sbjct: 410 SAPEHQPSALEHRTHFSGDVQRFNSANDDNVTQVRTFYLKVLNEEQRKRLCENIAGHLKD 469
Query: 200 AAPFIQ 205
A FIQ
Sbjct: 470 AQLFIQ 475
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 3 IDNQNGAPNYYPNSFKGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDA 62
+DNQ GAPNYYPNSF PE P + +GDV+R+ + ++DN +Q R + VL++
Sbjct: 395 MDNQGGAPNYYPNSFSAPEHQPSALEHRTHFSGDVQRFNSANDDNVTQVRTFYLKVLNEE 454
Query: 63 ARDRMTTNIASVLKLAAPFIQGR-LHSYIDTH 93
R R+ NIA LK A FIQ + + ++ D H
Sbjct: 455 QRKRLCENIAGHLKDAQLFIQKKAVKNFSDVH 486
>pdb|7CAT|A Chain A, The Nadph Binding Site On Beef Liver Catalase
pdb|8CAT|A Chain A, The Nadph Binding Site On Beef Liver Catalase
pdb|8CAT|B Chain B, The Nadph Binding Site On Beef Liver Catalase
pdb|4BLC|A Chain A, The Structure Of Orthorhombic Crystals Of Beef Liver
Catalase
pdb|4BLC|B Chain B, The Structure Of Orthorhombic Crystals Of Beef Liver
Catalase
pdb|4BLC|C Chain C, The Structure Of Orthorhombic Crystals Of Beef Liver
Catalase
pdb|4BLC|D Chain D, The Structure Of Orthorhombic Crystals Of Beef Liver
Catalase
pdb|1TGU|A Chain A, The Crystal Structure Of Bovine Liver Catalase Without
Nadph
pdb|1TGU|B Chain B, The Crystal Structure Of Bovine Liver Catalase Without
Nadph
pdb|1TGU|C Chain C, The Crystal Structure Of Bovine Liver Catalase Without
Nadph
pdb|1TGU|D Chain D, The Crystal Structure Of Bovine Liver Catalase Without
Nadph
pdb|1TH2|A Chain A, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With Azide
pdb|1TH2|B Chain B, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With Azide
pdb|1TH2|C Chain C, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With Azide
pdb|1TH2|D Chain D, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With Azide
pdb|1TH3|A Chain A, Crystal Structure Of Nadph Depleted Bovine Live Catalase
Complexed With Cyanide
pdb|1TH3|B Chain B, Crystal Structure Of Nadph Depleted Bovine Live Catalase
Complexed With Cyanide
pdb|1TH3|C Chain C, Crystal Structure Of Nadph Depleted Bovine Live Catalase
Complexed With Cyanide
pdb|1TH3|D Chain D, Crystal Structure Of Nadph Depleted Bovine Live Catalase
Complexed With Cyanide
pdb|1TH4|A Chain A, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With 3-Amino-1,2,4-Triazole
pdb|1TH4|B Chain B, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With 3-Amino-1,2,4-Triazole
pdb|1TH4|C Chain C, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With 3-Amino-1,2,4-Triazole
pdb|1TH4|D Chain D, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With 3-Amino-1,2,4-Triazole
pdb|7CAT|B Chain B, The Nadph Binding Site On Beef Liver Catalase
Length = 506
Score = 141 bits (355), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 85/126 (67%), Gaps = 1/126 (0%)
Query: 81 FIQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANYQRDAPMA-IDNQNGAPNYYPNSF 139
+QGRL +Y DTH HRLG N+ QIPVNCPYR RVANYQRD PM +DNQ GAPNYYPNSF
Sbjct: 349 MLQGRLFAYPDTHRHRLGPNYLQIPVNCPYRARVANYQRDGPMCMMDNQGGAPNYYPNSF 408
Query: 140 KGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDAARDRMTTNIASVLKL 199
PE P + +GDV+R+ + ++DN +Q R + VL++ R R+ NIA LK
Sbjct: 409 SAPEHQPSALEHRTHFSGDVQRFNSANDDNVTQVRTFYLKVLNEEQRKRLCENIAGHLKD 468
Query: 200 AAPFIQ 205
A FIQ
Sbjct: 469 AQLFIQ 474
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 3 IDNQNGAPNYYPNSFKGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDA 62
+DNQ GAPNYYPNSF PE P + +GDV+R+ + ++DN +Q R + VL++
Sbjct: 394 MDNQGGAPNYYPNSFSAPEHQPSALEHRTHFSGDVQRFNSANDDNVTQVRTFYLKVLNEE 453
Query: 63 ARDRMTTNIASVLKLAAPFIQGR-LHSYIDTH 93
R R+ NIA LK A FIQ + + ++ D H
Sbjct: 454 QRKRLCENIAGHLKDAQLFIQKKAVKNFSDVH 485
>pdb|3RGP|A Chain A, Structural And Kinetic Analysis Of The Beef Liver Catalase
Complexed With Nitric Oxide
pdb|3RGP|B Chain B, Structural And Kinetic Analysis Of The Beef Liver Catalase
Complexed With Nitric Oxide
pdb|3RGP|C Chain C, Structural And Kinetic Analysis Of The Beef Liver Catalase
Complexed With Nitric Oxide
pdb|3RGP|D Chain D, Structural And Kinetic Analysis Of The Beef Liver Catalase
Complexed With Nitric Oxide
pdb|3RGS|A Chain A, Structural And Kinetic Analysis Of The Beef Liver Catalase
With The Ammonia As A Ligand
pdb|3RGS|B Chain B, Structural And Kinetic Analysis Of The Beef Liver Catalase
With The Ammonia As A Ligand
pdb|3RGS|C Chain C, Structural And Kinetic Analysis Of The Beef Liver Catalase
With The Ammonia As A Ligand
pdb|3RGS|D Chain D, Structural And Kinetic Analysis Of The Beef Liver Catalase
With The Ammonia As A Ligand
pdb|3RE8|A Chain A, Structural And Kinetic Analysis Of The Beef Liver Catalase
Interacting With Nitric Oxide
pdb|3RE8|B Chain B, Structural And Kinetic Analysis Of The Beef Liver Catalase
Interacting With Nitric Oxide
pdb|3RE8|C Chain C, Structural And Kinetic Analysis Of The Beef Liver Catalase
Interacting With Nitric Oxide
pdb|3RE8|D Chain D, Structural And Kinetic Analysis Of The Beef Liver Catalase
Interacting With Nitric Oxide
Length = 499
Score = 141 bits (355), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 85/125 (68%), Gaps = 1/125 (0%)
Query: 82 IQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANYQRDAPMA-IDNQNGAPNYYPNSFK 140
+QGRL +Y DTH HRLG N+ QIPVNCPYR RVANYQRD PM +DNQ GAPNYYPNSF
Sbjct: 348 LQGRLFAYPDTHRHRLGPNYLQIPVNCPYRARVANYQRDGPMCMMDNQGGAPNYYPNSFS 407
Query: 141 GPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDAARDRMTTNIASVLKLA 200
PE P + +GDV+R+ + ++DN +Q R + VL++ R R+ NIA LK A
Sbjct: 408 APEHQPSALEHRTHFSGDVQRFNSANDDNVTQVRTFYLKVLNEEQRKRLCENIAGHLKDA 467
Query: 201 APFIQ 205
FIQ
Sbjct: 468 QLFIQ 472
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 3 IDNQNGAPNYYPNSFKGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDA 62
+DNQ GAPNYYPNSF PE P + +GDV+R+ + ++DN +Q R + VL++
Sbjct: 392 MDNQGGAPNYYPNSFSAPEHQPSALEHRTHFSGDVQRFNSANDDNVTQVRTFYLKVLNEE 451
Query: 63 ARDRMTTNIASVLKLAAPFIQGR-LHSYIDTH 93
R R+ NIA LK A FIQ + + ++ D H
Sbjct: 452 QRKRLCENIAGHLKDAQLFIQKKAVKNFSDVH 483
>pdb|2XQ1|A Chain A, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|B Chain B, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|C Chain C, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|D Chain D, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|E Chain E, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|F Chain F, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|G Chain G, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|H Chain H, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|I Chain I, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|J Chain J, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|K Chain K, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|L Chain L, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|M Chain M, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|N Chain N, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|O Chain O, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|P Chain P, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
Length = 509
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 71/136 (52%), Gaps = 12/136 (8%)
Query: 80 PFIQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVAN-YQRDAPMAID-NQNGAPNYYPN 137
P +Q RL SY DTH HRLG N++QIPVNCP + N RD PM +D N G PN Y N
Sbjct: 341 PVLQSRLFSYPDTHRHRLGPNYHQIPVNCPLKSGSFNPINRDGPMCVDGNLGGTPN-YAN 399
Query: 138 SFKGP-----EPTPRGAWSTYNATGDVKRYKTEDED-NFSQPRILWSNVLDD--AARDRM 189
++ P P G TG+V Y E D ++ QP++ W VL ++ +
Sbjct: 400 AYNCPIQYAVSPKASGNKPDEKYTGEVVPYHWEHTDYDYFQPKMFW-KVLGRTPGEQESL 458
Query: 190 TTNIASVLKLAAPFIQ 205
N+A+ + A FIQ
Sbjct: 459 VKNVANHVSAADEFIQ 474
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 11/99 (11%)
Query: 1 MAID-NQNGAPNYYPNSFKGP-----EPTPRGAWSTYNATGDVKRYKTEDED-NFSQPRI 53
M +D N G PNY N++ P P G TG+V Y E D ++ QP++
Sbjct: 385 MCVDGNLGGTPNY-ANAYNCPIQYAVSPKASGNKPDEKYTGEVVPYHWEHTDYDYFQPKM 443
Query: 54 LWSNVLDD--AARDRMTTNIASVLKLAAPFIQGRLHSYI 90
W VL ++ + N+A+ + A FIQ R++ Y
Sbjct: 444 FW-KVLGRTPGEQESLVKNVANHVSAADEFIQDRVYEYF 481
>pdb|1SI8|A Chain A, Crystal Structure Of E. Faecalis Catalase
pdb|1SI8|B Chain B, Crystal Structure Of E. Faecalis Catalase
pdb|1SI8|C Chain C, Crystal Structure Of E. Faecalis Catalase
pdb|1SI8|D Chain D, Crystal Structure Of E. Faecalis Catalase
Length = 484
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 70/118 (59%), Gaps = 4/118 (3%)
Query: 81 FIQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANYQRDAPMAIDNQNGAPNYYPNSF- 139
+QGRL +Y D H HR+GAN +Q+P+N + V NYQ+D M +N N NY PNS+
Sbjct: 329 LLQGRLFAYGDAHRHRVGANSHQLPINQA-KAPVNNYQKDGNMRFNNGNSEINYEPNSYT 387
Query: 140 KGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDAARDRMTTNIASVL 197
+ P+ P S++ G+V Y + ++D+F+Q L+ N+L ++ + NIA+ L
Sbjct: 388 ETPKEDPTAKISSFEVEGNVGNY-SYNQDHFTQANALY-NLLPSEEKENLINNIAASL 443
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 1 MAIDNQNGAPNYYPNSF-KGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILWSNVL 59
M +N N NY PNS+ + P+ P S++ G+V Y + ++D+F+Q L+ N+L
Sbjct: 370 MRFNNGNSEINYEPNSYTETPKEDPTAKISSFEVEGNVGNY-SYNQDHFTQANALY-NLL 427
Query: 60 DDAARDRMTTNIASVL 75
++ + NIA+ L
Sbjct: 428 PSEEKENLINNIAASL 443
>pdb|1H7K|A Chain A, Formation Of A Tyrosyl Radical Intermediate In Proteus
Mirabilis Catalase By Directed Mutagenesis And
Consequences For Nucleotide Reactivity
Length = 483
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 82 IQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANYQRDAPMAIDNQNG-APNYYPNS-- 138
+QGRL SY D H +RLG N +QIPVN P + NY RD M +D +G Y PNS
Sbjct: 329 LQGRLFSYGDAHRYRLGVNHHQIPVNAP-KCPFHNYHRDGAMRVDGNSGNGITYEPNSGG 387
Query: 139 -------FKGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDAARDRMTT 191
FK P + GA +N EDED FSQPR L+ +L D RM
Sbjct: 388 VFQEQPDFKEPPLSIEGAADHWN--------HREDEDYFSQPRALYE-LLSDDEHQRMFA 438
Query: 192 NIASVLKLAAPFIQ 205
IA L A+ Q
Sbjct: 439 RIAGELSQASKETQ 452
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 40/95 (42%), Gaps = 19/95 (20%)
Query: 1 MAIDNQNG-APNYYPNS---------FKGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQ 50
M +D +G Y PNS FK P + GA +N EDED FSQ
Sbjct: 369 MRVDGNSGNGITYEPNSGGVFQEQPDFKEPPLSIEGAADHWN--------HREDEDYFSQ 420
Query: 51 PRILWSNVLDDAARDRMTTNIASVLKLAAPFIQGR 85
PR L+ +L D RM IA L A+ Q R
Sbjct: 421 PRALYE-LLSDDEHQRMFARIAGELSQASKETQQR 454
>pdb|1E93|A Chain A, High Resolution Structure And Biochemical Properties Of A
Recombinant Catalase Depleted In Iron
Length = 484
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 82 IQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANYQRDAPMAIDNQNG-APNYYPNS-- 138
+QGRL SY D H +RLG N +QIPVN P + NY RD M +D +G Y PNS
Sbjct: 330 LQGRLFSYGDAHRYRLGVNHHQIPVNAP-KCPFHNYHRDGAMRVDGNSGNGITYEPNSGG 388
Query: 139 -------FKGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDAARDRMTT 191
FK P + GA +N EDED FSQPR L+ +L D RM
Sbjct: 389 VFQEQPDFKEPPLSIEGAADHWN--------HREDEDYFSQPRALYE-LLSDDEHQRMFA 439
Query: 192 NIASVLKLAAPFIQ 205
IA L A+ Q
Sbjct: 440 RIAGELSQASKETQ 453
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 40/95 (42%), Gaps = 19/95 (20%)
Query: 1 MAIDNQNG-APNYYPNS---------FKGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQ 50
M +D +G Y PNS FK P + GA +N EDED FSQ
Sbjct: 370 MRVDGNSGNGITYEPNSGGVFQEQPDFKEPPLSIEGAADHWN--------HREDEDYFSQ 421
Query: 51 PRILWSNVLDDAARDRMTTNIASVLKLAAPFIQGR 85
PR L+ +L D RM IA L A+ Q R
Sbjct: 422 PRALYE-LLSDDEHQRMFARIAGELSQASKETQQR 455
>pdb|1H6N|A Chain A, Formation Of A Tyrosyl Radical Intermediate In Proteus
Mirabilis Catalase By Directed Mutagenesis And
Consequences For Nucleotide Reactivity
Length = 484
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 82 IQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANYQRDAPMAIDNQNG-APNYYPNS-- 138
+QGRL SY D H +RLG N +QIPVN P + NY RD M +D +G Y PNS
Sbjct: 330 LQGRLFSYGDAHRYRLGVNHHQIPVNAP-KCPFHNYHRDGAMRVDGNSGNGITYEPNSGG 388
Query: 139 -------FKGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDAARDRMTT 191
FK P + GA +N EDED FSQPR L+ +L D RM
Sbjct: 389 VFQEQPDFKEPPLSIEGAADHWN--------HREDEDYFSQPRALYE-LLSDDEHQRMFA 439
Query: 192 NIASVLKLAAPFIQ 205
IA L A+ Q
Sbjct: 440 RIAGELSQASKETQ 453
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 40/95 (42%), Gaps = 19/95 (20%)
Query: 1 MAIDNQNG-APNYYPNS---------FKGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQ 50
M +D +G Y PNS FK P + GA +N EDED FSQ
Sbjct: 370 MRVDGNSGNGITYEPNSGGVFQEQPDFKEPPLSIEGAADHWN--------HREDEDYFSQ 421
Query: 51 PRILWSNVLDDAARDRMTTNIASVLKLAAPFIQGR 85
PR L+ +L D RM IA L A+ Q R
Sbjct: 422 PRALYE-LLSDDEHQRMFARIAGELSQASKETQQR 455
>pdb|1M85|A Chain A, Structure Of Proteus Mirabilis Catalase For The Native
Form
pdb|1MQF|A Chain A, Compound I From Proteus Mirabilis Catalase
pdb|1NM0|A Chain A, Proteus Mirabilis Catalase In Complex With Formiate
pdb|2CAG|A Chain A, Catalase Compound Ii
pdb|2CAH|A Chain A, Structure Of Proteus Mirabilis Pr Catalase For The Native
Form (e- Fe(iii)) Complexed With Nadph
Length = 484
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 82 IQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANYQRDAPMAIDNQNG-APNYYPNS-- 138
+QGRL SY D H +RLG N +QIPVN P + NY RD M +D +G Y PNS
Sbjct: 330 LQGRLFSYGDAHRYRLGVNHHQIPVNAP-KCPFHNYHRDGAMRVDGNSGNGITYEPNSGG 388
Query: 139 -------FKGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDAARDRMTT 191
FK P + GA +N EDED FSQPR L+ +L D RM
Sbjct: 389 VFQEQPDFKEPPLSIEGAADHWN--------HREDEDYFSQPRALYE-LLSDDEHQRMFA 439
Query: 192 NIASVLKLAAPFIQ 205
IA L A+ Q
Sbjct: 440 RIAGELSQASKETQ 453
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 40/95 (42%), Gaps = 19/95 (20%)
Query: 1 MAIDNQNG-APNYYPNS---------FKGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQ 50
M +D +G Y PNS FK P + GA +N EDED FSQ
Sbjct: 370 MRVDGNSGNGITYEPNSGGVFQEQPDFKEPPLSIEGAADHWN--------HREDEDYFSQ 421
Query: 51 PRILWSNVLDDAARDRMTTNIASVLKLAAPFIQGR 85
PR L+ +L D RM IA L A+ Q R
Sbjct: 422 PRALYE-LLSDDEHQRMFARIAGELSQASKETQQR 455
>pdb|3HB6|A Chain A, Inactive Mutant H54f Of Proteus Mirabilis Catalase
Length = 484
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 82 IQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANYQRDAPMAIDNQNG-APNYYPNS-- 138
+QGRL SY D H +RLG N +QIPVN P + NY RD M +D +G Y PNS
Sbjct: 330 LQGRLFSYGDAHRYRLGVNHHQIPVNAP-KCPFHNYHRDGAMRVDGNSGNGITYEPNSGG 388
Query: 139 -------FKGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDAARDRMTT 191
FK P + GA +N EDED FSQPR L+ +L D RM
Sbjct: 389 VFQEQPDFKEPPLSIEGAADHWN--------HREDEDYFSQPRALYE-LLSDDEHQRMFA 439
Query: 192 NIASVLKLAAPFIQ 205
IA L A+ Q
Sbjct: 440 RIAGELSQASKETQ 453
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 40/95 (42%), Gaps = 19/95 (20%)
Query: 1 MAIDNQNG-APNYYPNS---------FKGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQ 50
M +D +G Y PNS FK P + GA +N EDED FSQ
Sbjct: 370 MRVDGNSGNGITYEPNSGGVFQEQPDFKEPPLSIEGAADHWN--------HREDEDYFSQ 421
Query: 51 PRILWSNVLDDAARDRMTTNIASVLKLAAPFIQGR 85
PR L+ +L D RM IA L A+ Q R
Sbjct: 422 PRALYE-LLSDDEHQRMFARIAGELSQASKETQQR 455
>pdb|2J2M|A Chain A, Crystal Structure Analysis Of Catalase From
Exiguobacterium Oxidotolerans
pdb|2J2M|B Chain B, Crystal Structure Analysis Of Catalase From
Exiguobacterium Oxidotolerans
pdb|2J2M|C Chain C, Crystal Structure Analysis Of Catalase From
Exiguobacterium Oxidotolerans
pdb|2J2M|D Chain D, Crystal Structure Analysis Of Catalase From
Exiguobacterium Oxidotolerans
Length = 491
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 71 IASVLKLAAPFIQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANYQRDAPMAIDNQNG 130
+ +L +QGRL SY DT HR+G N+ Q+P+NCP+ +V NYQRD M Q
Sbjct: 321 VPGMLPSEDKLLQGRLFSYSDTQRHRIGPNYQQLPINCPF-AQVNNYQRDGAMPFKQQTS 379
Query: 131 APNYYPNSFKG-PEPTPRGAWSTYNATGDVK-RYKTEDEDNFSQ 172
+ NY PN ++ P+ TP T D+ R + E +NF Q
Sbjct: 380 SVNYEPNRYQDEPKQTPEYTEDTQPLHDDIHGRLEIEKTNNFGQ 423
>pdb|1SY7|A Chain A, Crystal Structure Of The Catalase-1 From Neurospora
Crassa, Native Structure At 1.75a Resolution.
pdb|1SY7|B Chain B, Crystal Structure Of The Catalase-1 From Neurospora
Crassa, Native Structure At 1.75a Resolution
Length = 715
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 80 PFIQGRLHSYIDTHIHRLGANFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYYP 136
P +QGR SY DT I RLG NF ++P+N CP V N+ RD M G NYYP
Sbjct: 349 PLLQGRNFSYFDTQISRLGVNFQELPINRPVCP----VMNFNRDGAMRHTISRGTVNYYP 404
Query: 137 NSFKG--PEPTPRGAWSTY--NATGDVKRYKTED-EDNFSQPRILWSNV 180
N F P G + Y G R ++ +++FSQ ++ ++++
Sbjct: 405 NRFDACPPASLKEGGYLEYAQKVAGIKARARSAKFKEHFSQAQLFYNSM 453
>pdb|3TTU|A Chain A, Structure Of F413y/h128n Double Variant Of E. Coli Kate
pdb|3TTU|B Chain B, Structure Of F413y/h128n Double Variant Of E. Coli Kate
pdb|3TTU|C Chain C, Structure Of F413y/h128n Double Variant Of E. Coli Kate
pdb|3TTU|D Chain D, Structure Of F413y/h128n Double Variant Of E. Coli Kate
Length = 753
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL+SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLYSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|3TTV|A Chain A, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTV|B Chain B, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTV|C Chain C, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTV|D Chain D, Structure Of The F413e Variant Of E. Coli Kate
Length = 753
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL+SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLYSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|3TTT|A Chain A, Structure Of F413y Variant Of E. Coli Kate
pdb|3TTT|B Chain B, Structure Of F413y Variant Of E. Coli Kate
pdb|3TTT|C Chain C, Structure Of F413y Variant Of E. Coli Kate
pdb|3TTT|D Chain D, Structure Of F413y Variant Of E. Coli Kate
Length = 753
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL+SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLYSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|3TTW|A Chain A, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTW|B Chain B, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTW|C Chain C, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTW|D Chain D, Structure Of The F413e Variant Of E. Coli Kate
Length = 753
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLESYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|4ENP|A Chain A, Structure Of E530a Variant E. Coli Kate
pdb|4ENP|B Chain B, Structure Of E530a Variant E. Coli Kate
pdb|4ENP|C Chain C, Structure Of E530a Variant E. Coli Kate
pdb|4ENP|D Chain D, Structure Of E530a Variant E. Coli Kate
Length = 753
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 67/139 (48%), Gaps = 17/139 (12%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILWSNVLDDAAR 186
PNS P TP RG + +Y G+ R ++ + +S PR+ W + R
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQR 521
Query: 187 DRMTTNIASVLKLAAPFIQ 205
+ ++ K+ P+I+
Sbjct: 522 HIVDGFSFALSKVVRPYIR 540
>pdb|3TTX|A Chain A, Structure Of The F413k Variant Of E. Coli Kate
pdb|3TTX|B Chain B, Structure Of The F413k Variant Of E. Coli Kate
pdb|3TTX|C Chain C, Structure Of The F413k Variant Of E. Coli Kate
pdb|3TTX|D Chain D, Structure Of The F413k Variant Of E. Coli Kate
Length = 753
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLKSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|1GGJ|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201ala Variant.
pdb|1GGJ|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201ala Variant.
pdb|1GGJ|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201ala Variant.
pdb|1GGJ|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201ala Variant
Length = 753
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|3P9R|A Chain A, Structure Of I274g Variant Of E. Coli Kate
pdb|3P9R|B Chain B, Structure Of I274g Variant Of E. Coli Kate
pdb|3P9R|C Chain C, Structure Of I274g Variant Of E. Coli Kate
pdb|3P9R|D Chain D, Structure Of I274g Variant Of E. Coli Kate
Length = 753
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|1GGH|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128ala Variant.
pdb|1GGH|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128ala Variant.
pdb|1GGH|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128ala Variant.
pdb|1GGH|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128ala Variant
Length = 753
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|1GG9|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128asn Variant.
pdb|1GG9|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128asn Variant.
pdb|1GG9|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128asn Variant.
pdb|1GG9|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128asn Variant.
pdb|1GGF|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Variant His128asn, Complex With Hydrogen Peroxide.
pdb|1GGF|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Variant His128asn, Complex With Hydrogen Peroxide.
pdb|1GGF|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Variant His128asn, Complex With Hydrogen Peroxide.
pdb|1GGF|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Variant His128asn, Complex With Hydrogen Peroxide
Length = 753
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|3P9S|A Chain A, Structure Of I274a Variant Of E. Coli Kate
pdb|3P9S|B Chain B, Structure Of I274a Variant Of E. Coli Kate
pdb|3P9S|C Chain C, Structure Of I274a Variant Of E. Coli Kate
pdb|3P9S|D Chain D, Structure Of I274a Variant Of E. Coli Kate
Length = 753
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|1QWS|A Chain A, Structure Of The D181n Variant Of Catalase Hpii From E.
Coli
pdb|1QWS|B Chain B, Structure Of The D181n Variant Of Catalase Hpii From E.
Coli
pdb|1QWS|C Chain C, Structure Of The D181n Variant Of Catalase Hpii From E.
Coli
pdb|1QWS|D Chain D, Structure Of The D181n Variant Of Catalase Hpii From E.
Coli
Length = 753
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|1P7Y|A Chain A, Crystal Structure Of The D181a Variant Of Catalase Hpii
From E. Coli
pdb|1P7Y|B Chain B, Crystal Structure Of The D181a Variant Of Catalase Hpii
From E. Coli
pdb|1P7Y|C Chain C, Crystal Structure Of The D181a Variant Of Catalase Hpii
From E. Coli
pdb|1P7Y|D Chain D, Crystal Structure Of The D181a Variant Of Catalase Hpii
From E. Coli
Length = 753
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|4ENT|A Chain A, Structure Of The S234a Variant Of E. Coli Kate
pdb|4ENT|B Chain B, Structure Of The S234a Variant Of E. Coli Kate
pdb|4ENT|C Chain C, Structure Of The S234a Variant Of E. Coli Kate
pdb|4ENT|D Chain D, Structure Of The S234a Variant Of E. Coli Kate
Length = 753
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|1P81|A Chain A, Crystal Structure Of The D181e Variant Of Catalase Hpii
From E. Coli
pdb|1P81|B Chain B, Crystal Structure Of The D181e Variant Of Catalase Hpii
From E. Coli
pdb|1P81|C Chain C, Crystal Structure Of The D181e Variant Of Catalase Hpii
From E. Coli
pdb|1P81|D Chain D, Crystal Structure Of The D181e Variant Of Catalase Hpii
From E. Coli
Length = 753
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|1QF7|A Chain A, Structure Of The Mutant His392gln Of Catalase Hpii From E.
Coli
pdb|1QF7|B Chain B, Structure Of The Mutant His392gln Of Catalase Hpii From E.
Coli
pdb|1QF7|C Chain C, Structure Of The Mutant His392gln Of Catalase Hpii From E.
Coli
pdb|1QF7|D Chain D, Structure Of The Mutant His392gln Of Catalase Hpii From E.
Coli
Length = 753
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|1IPH|A Chain A, Structure Of Catalase Hpii From Escherichia Coli
pdb|1IPH|B Chain B, Structure Of Catalase Hpii From Escherichia Coli
pdb|1IPH|C Chain C, Structure Of Catalase Hpii From Escherichia Coli
pdb|1IPH|D Chain D, Structure Of Catalase Hpii From Escherichia Coli
pdb|1GGE|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Native Structure At 1.9 A Resolution.
pdb|1GGE|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Native Structure At 1.9 A Resolution.
pdb|1GGE|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Native Structure At 1.9 A Resolution.
pdb|1GGE|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Native Structure At 1.9 A Resolution
Length = 753
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|3P9P|A Chain A, Structure Of I274v Variant Of E. Coli Kate
pdb|3P9P|B Chain B, Structure Of I274v Variant Of E. Coli Kate
pdb|3P9P|C Chain C, Structure Of I274v Variant Of E. Coli Kate
pdb|3P9P|D Chain D, Structure Of I274v Variant Of E. Coli Kate
Length = 753
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|1GGK|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201his Variant.
pdb|1GGK|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201his Variant.
pdb|1GGK|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201his Variant.
pdb|1GGK|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201his Variant
Length = 753
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|1P80|A Chain A, Crystal Structure Of The D181q Variant Of Catalase Hpii
From E. Coli
pdb|1P80|B Chain B, Crystal Structure Of The D181q Variant Of Catalase Hpii
From E. Coli
pdb|1P80|C Chain C, Crystal Structure Of The D181q Variant Of Catalase Hpii
From E. Coli
pdb|1P80|D Chain D, Crystal Structure Of The D181q Variant Of Catalase Hpii
From E. Coli
Length = 753
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|1P7Z|A Chain A, Crystal Structure Of The D181s Variant Of Catalase Hpii
From E. Coli
pdb|1P7Z|B Chain B, Crystal Structure Of The D181s Variant Of Catalase Hpii
From E. Coli
pdb|1P7Z|C Chain C, Crystal Structure Of The D181s Variant Of Catalase Hpii
From E. Coli
pdb|1P7Z|D Chain D, Crystal Structure Of The D181s Variant Of Catalase Hpii
From E. Coli
Length = 753
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|4ENQ|A Chain A, Structure Of E530d Variant E. Coli Kate
pdb|4ENQ|B Chain B, Structure Of E530d Variant E. Coli Kate
pdb|4ENQ|C Chain C, Structure Of E530d Variant E. Coli Kate
pdb|4ENQ|D Chain D, Structure Of E530d Variant E. Coli Kate
Length = 753
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|1CF9|A Chain A, Structure Of The Mutant Val169cys Of Catalase Hpii From
Escherichia Coli
pdb|1CF9|B Chain B, Structure Of The Mutant Val169cys Of Catalase Hpii From
Escherichia Coli
pdb|1CF9|C Chain C, Structure Of The Mutant Val169cys Of Catalase Hpii From
Escherichia Coli
pdb|1CF9|D Chain D, Structure Of The Mutant Val169cys Of Catalase Hpii From
Escherichia Coli
Length = 753
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|4ENW|A Chain A, Structure Of The S234n Variant Of E. Coli Kate
pdb|4ENW|B Chain B, Structure Of The S234n Variant Of E. Coli Kate
pdb|4ENW|C Chain C, Structure Of The S234n Variant Of E. Coli Kate
pdb|4ENW|D Chain D, Structure Of The S234n Variant Of E. Coli Kate
Length = 753
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|4ENR|A Chain A, Structure Of E530i Variant E. Coli Kate
pdb|4ENR|B Chain B, Structure Of E530i Variant E. Coli Kate
pdb|4ENR|C Chain C, Structure Of E530i Variant E. Coli Kate
pdb|4ENR|D Chain D, Structure Of E530i Variant E. Coli Kate
Length = 753
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|4ENU|A Chain A, Structure Of The S234d Variant Of E. Coli Kate
pdb|4ENU|B Chain B, Structure Of The S234d Variant Of E. Coli Kate
pdb|4ENU|C Chain C, Structure Of The S234d Variant Of E. Coli Kate
pdb|4ENU|D Chain D, Structure Of The S234d Variant Of E. Coli Kate
Length = 753
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|4ENS|A Chain A, Structure Of E530q Variant Of E. Coli Kate
pdb|4ENS|B Chain B, Structure Of E530q Variant Of E. Coli Kate
pdb|4ENS|C Chain C, Structure Of E530q Variant Of E. Coli Kate
pdb|4ENS|D Chain D, Structure Of E530q Variant Of E. Coli Kate
Length = 753
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|4ENV|A Chain A, Structure Of The S234i Variant Of E. Coli Kate
pdb|4ENV|B Chain B, Structure Of The S234i Variant Of E. Coli Kate
pdb|4ENV|C Chain C, Structure Of The S234i Variant Of E. Coli Kate
pdb|4ENV|D Chain D, Structure Of The S234i Variant Of E. Coli Kate
Length = 753
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|1YE9|E Chain E, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|F Chain F, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|G Chain G, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|H Chain H, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|M Chain M, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|N Chain N, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|O Chain O, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|P Chain P, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
Length = 259
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 64/139 (46%), Gaps = 17/139 (12%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N CPY N+QRD + NY
Sbjct: 98 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYH----NFQRDGMHRMGIDTNPANYE 153
Query: 136 PNSFKG--PEPTP----RGAWSTYNATGD---VKRYKTEDEDNFSQPRILWSNVLDDAAR 186
PNS P TP RG + +Y + V+ + +S PR+ W + R
Sbjct: 154 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQR 213
Query: 187 DRMTTNIASVLKLAAPFIQ 205
+ + K+ P+I+
Sbjct: 214 HIVDGFSFELSKVVRPYIR 232
>pdb|1A4E|A Chain A, Catalase A From Saccharomyces Cerevisiae
pdb|1A4E|B Chain B, Catalase A From Saccharomyces Cerevisiae
pdb|1A4E|C Chain C, Catalase A From Saccharomyces Cerevisiae
pdb|1A4E|D Chain D, Catalase A From Saccharomyces Cerevisiae
Length = 488
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 78 AAPFIQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVAN-YQRDAPMAIDNQNGA-PNYY 135
A P +Q RL SY D H +RLG NF+QIPVNCPY + N RD PM ++ G+ P Y
Sbjct: 330 ADPVLQARLFSYADAHRYRLGPNFHQIPVNCPYASKFFNPAIRDGPMNVNGNFGSEPTYL 389
Query: 136 PN 137
N
Sbjct: 390 AN 391
>pdb|3P9Q|A Chain A, Structure Of I274c Variant Of E. Coli Kate
pdb|3P9Q|B Chain B, Structure Of I274c Variant Of E. Coli Kate
pdb|3P9Q|C Chain C, Structure Of I274c Variant Of E. Coli Kate
pdb|3P9Q|D Chain D, Structure Of I274c Variant Of E. Coli Kate
pdb|3PQ2|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images 1-6
pdb|3PQ2|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images 1-6
pdb|3PQ2|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images 1-6
pdb|3PQ2|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images 1-6
pdb|3PQ3|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images 7-12
pdb|3PQ3|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images 7-12
pdb|3PQ3|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images 7-12
pdb|3PQ3|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images 7-12
pdb|3PQ4|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images
13-18
pdb|3PQ4|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images
13-18
pdb|3PQ4|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images
13-18
pdb|3PQ4|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images
13-18
pdb|3PQ5|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images
19-24
pdb|3PQ5|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images
19-24
pdb|3PQ5|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images
19-24
pdb|3PQ5|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images
19-24
pdb|3PQ6|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images
25-30
pdb|3PQ6|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images
25-30
pdb|3PQ6|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images
25-30
pdb|3PQ6|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images
25-30
pdb|3PQ7|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images
31-36
pdb|3PQ7|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images
31-36
pdb|3PQ7|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images
31-36
pdb|3PQ7|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images
31-36
pdb|3PQ8|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images
37-42
pdb|3PQ8|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images
37-42
pdb|3PQ8|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images
37-42
pdb|3PQ8|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images
37-42
Length = 753
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 55/111 (49%), Gaps = 17/111 (15%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVN---CPYRVRVANYQRDAPMAIDNQNGAPNYY 135
P +QGRL SY DT I RLG NF++IP+N PY N+QRD + NY
Sbjct: 406 PLLQGRLFSYTDTQISRLGGPNFHEIPINRPTAPYH----NFQRDGMHRMGIDTNPANYE 461
Query: 136 PNSFKG--PEPTP----RGAWSTYN--ATGDVKRYKTED-EDNFSQPRILW 177
PNS P TP RG + +Y G+ R ++ + +S PR+ W
Sbjct: 462 PNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW 512
>pdb|2ISA|A Chain A, Crystal Structure Of Vibrio Salmonicida Catalase
pdb|2ISA|B Chain B, Crystal Structure Of Vibrio Salmonicida Catalase
pdb|2ISA|C Chain C, Crystal Structure Of Vibrio Salmonicida Catalase
pdb|2ISA|D Chain D, Crystal Structure Of Vibrio Salmonicida Catalase
pdb|2ISA|E Chain E, Crystal Structure Of Vibrio Salmonicida Catalase
pdb|2ISA|F Chain F, Crystal Structure Of Vibrio Salmonicida Catalase
pdb|2ISA|G Chain G, Crystal Structure Of Vibrio Salmonicida Catalase
pdb|2ISA|H Chain H, Crystal Structure Of Vibrio Salmonicida Catalase
Length = 483
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 49/107 (45%), Gaps = 17/107 (15%)
Query: 81 FIQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANYQRDAPMAIDNQNGAPNYYPNSFK 140
+QGRL +Y D +RLG N IPVN P R V +Y RD M +D G S
Sbjct: 328 MLQGRLFAYGDAQRYRLGVNHQHIPVNAP-RCPVHSYHRDGAMRVDGNFG-------STL 379
Query: 141 GPEPTPRGAWST--------YNATGDVKRY-KTEDEDNFSQPRILWS 178
G EP +G W+ N G + EDED FSQP L+
Sbjct: 380 GYEPNDQGQWAEQPDFSEPPLNLDGAAAHWDHREDEDYFSQPGDLFG 426
>pdb|2XF2|A Chain A, Pvc-At
pdb|2XF2|E Chain E, Pvc-At
Length = 688
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 37/142 (26%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVNCPYRVRVANYQRDAPMAIDNQNGAPNYY--- 135
P +QGRL SY+DT ++R G NF Q+P+N P AP+ +N++GA +
Sbjct: 341 PLLQGRLFSYLDTQLNRHGGPNFEQLPINRPR----------APIHNNNRDGAGQMFIPL 390
Query: 136 -PNSF------KGP-----EPTPRGAWST--YNATGDVKR-YKTEDEDNFSQPRILWSNV 180
PN++ KG E +G ++ A+G ++R T E+N+SQPR+ W+++
Sbjct: 391 DPNAYSPNTENKGSPKQANETVGKGFFTAPERTASGKLQRTLSTTFENNWSQPRLFWNSL 450
Query: 181 LD-------DAARDRMTTNIAS 195
++ DA R T+N++S
Sbjct: 451 VNAQKEFIVDAMRFE-TSNVSS 471
Score = 26.9 bits (58), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 9/49 (18%)
Query: 33 ATGDVKR-YKTEDEDNFSQPRILWSNVLD-------DAARDRMTTNIAS 73
A+G ++R T E+N+SQPR+ W+++++ DA R T+N++S
Sbjct: 424 ASGKLQRTLSTTFENNWSQPRLFWNSLVNAQKEFIVDAMRFE-TSNVSS 471
>pdb|2IUF|A Chain A, The Structures Of Penicillium Vitale Catalase: Resting
State, Oxidised State (Compound I) And Complex With
Aminotriazole
pdb|2IUF|E Chain E, The Structures Of Penicillium Vitale Catalase: Resting
State, Oxidised State (Compound I) And Complex With
Aminotriazole
Length = 688
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 75/145 (51%), Gaps = 36/145 (24%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVNCPYRVRVANYQRDAPMAIDNQNGAPNYY--- 135
P +QGRL SY+DT ++R G NF Q+P+N P AP+ +N++GA +
Sbjct: 341 PLLQGRLFSYLDTQLNRHGGPNFEQLPINRPR----------APIHNNNRDGAGQMFIPL 390
Query: 136 -PNSF------KGP-----EPTPRGAWST--YNATGDVKR-YKTEDEDNFSQPRILWSNV 180
PN++ KG E +G ++ A+G ++R T E+N+SQPR+ W+++
Sbjct: 391 DPNAYSPNTENKGSPKQANETVGKGFFTAPERTASGKLQRTLSTTFENNWSQPRLFWNSL 450
Query: 181 LD-------DAARDRMTTNIASVLK 198
++ DA R + +SV++
Sbjct: 451 VNAQKEFIVDAXRFETSNVSSSVVR 475
Score = 26.9 bits (58), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 8/52 (15%)
Query: 33 ATGDVKR-YKTEDEDNFSQPRILWSNVLD-------DAARDRMTTNIASVLK 76
A+G ++R T E+N+SQPR+ W+++++ DA R + +SV++
Sbjct: 424 ASGKLQRTLSTTFENNWSQPRLFWNSLVNAQKEFIVDAXRFETSNVSSSVVR 475
>pdb|1M7S|A Chain A, Crystal Structure Analysis Of Catalase Catf Of Pseudomonas
Syringae
pdb|1M7S|B Chain B, Crystal Structure Analysis Of Catalase Catf Of Pseudomonas
Syringae
pdb|1M7S|C Chain C, Crystal Structure Analysis Of Catalase Catf Of Pseudomonas
Syringae
pdb|1M7S|D Chain D, Crystal Structure Analysis Of Catalase Catf Of Pseudomonas
Syringae
Length = 484
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 81 FIQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANYQRDAPMAIDNQNGAPNYYPNSFK 140
+QGR+ SY DT ++RLGAN +PVN P +V V N +D + + NY P+
Sbjct: 324 LLQGRVFSYADTQMYRLGANGLSLPVNQP-KVAVNNGNQDGALNTGHTTSGVNYEPSRL- 381
Query: 141 GPEPTP---RGAWSTYNATGDVKRYKTEDEDNFSQPRILW 177
EP P + +S +G ++ K E NF Q L+
Sbjct: 382 --EPRPADDKARYSELPLSGTTQQAKITREQNFKQAGDLY 419
>pdb|1GWH|A Chain A, Atomic Resolution Structure Of Micrococcus Lysodeikticus
Catalase Complexed With Nadph
pdb|1GWE|A Chain A, Atomic Resolution Structure Of Micrococcus Lysodeikticus
Catalase
Length = 503
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 50/122 (40%), Gaps = 5/122 (4%)
Query: 81 FIQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANYQRDAPMAIDNQNGAPNYYPNSFK 140
+ GR +Y D ++R+GA+ NQ+PVN P + V NY + M D+ Y PNS
Sbjct: 335 MLLGRAFAYHDAQLYRVGAHVNQLPVNRP-KNAVHNYAFEGQMWYDHTGDRSTYVPNSNG 393
Query: 141 GPEPTPRG----AWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDAARDRMTTNIASV 196
G W + D+D+F Q L V D RD +A
Sbjct: 394 DSWSDETGPVDDGWEADGTLTREAQALRADDDDFGQAGTLVREVFSDQERDDFVETVAGA 453
Query: 197 LK 198
LK
Sbjct: 454 LK 455
Score = 30.0 bits (66), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 19/46 (41%)
Query: 44 DEDNFSQPRILWSNVLDDAARDRMTTNIASVLKLAAPFIQGRLHSY 89
D+D+F Q L V D RD +A LK +Q R Y
Sbjct: 423 DDDDFGQAGTLVREVFSDQERDDFVETVAGALKGVRQDVQARAFEY 468
>pdb|1HBZ|A Chain A, Catalase From Micrococcus Lysodeikticu
Length = 498
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 50/122 (40%), Gaps = 5/122 (4%)
Query: 81 FIQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANYQRDAPMAIDNQNGAPNYYPNSFK 140
+ GR +Y D ++R+GA+ NQ+PVN P + V NY + M D+ Y PNS
Sbjct: 330 MLLGRAFAYHDAQLYRVGAHVNQLPVNRP-KNAVHNYAFEGQMWYDHTGDRSTYVPNSNG 388
Query: 141 GPEPTPRG----AWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDAARDRMTTNIASV 196
G W + D+D+F Q L V D RD +A
Sbjct: 389 DSWSDETGPVDDGWEADGTLTREAQALRADDDDFGQAGTLVREVFSDQERDDFVETVAGA 448
Query: 197 LK 198
LK
Sbjct: 449 LK 450
Score = 30.0 bits (66), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 19/46 (41%)
Query: 44 DEDNFSQPRILWSNVLDDAARDRMTTNIASVLKLAAPFIQGRLHSY 89
D+D+F Q L V D RD +A LK +Q R Y
Sbjct: 418 DDDDFGQAGTLVREVFSDQERDDFVETVAGALKGVRQDVQARAFEY 463
>pdb|1QWL|A Chain A, Structure Of Helicobacter Pylori Catalase
pdb|1QWL|B Chain B, Structure Of Helicobacter Pylori Catalase
pdb|1QWM|A Chain A, Structure Of Helicobacter Pylori Catalase With Formic Acid
Bound
pdb|1QWM|B Chain B, Structure Of Helicobacter Pylori Catalase With Formic Acid
Bound
Length = 505
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Query: 82 IQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANYQRDAPMAIDNQNGAPNYYPNSFKG 141
+QGRL SY DTH +RLG N+ QIPVN P R + RD M NY P+S G
Sbjct: 332 LQGRLFSYGDTHRYRLGVNYPQIPVNKP-RCPFHSSSRDGYMQNGYYGSLQNYTPSSLPG 390
Query: 142 PEPTPRGAWSTYNATGDVKR-------YKTEDEDNFSQPRILWSNVLDDAARDRMTTNIA 194
+ +N K Y+ +D D ++QP + ++ D ++R+ I
Sbjct: 391 YKEDKSARDPKFNLAHIEKEFEVWNWDYRADDSDYYTQPGDYYRSLPAD-EKERLHDTIG 449
Query: 195 SVL 197
L
Sbjct: 450 ESL 452
>pdb|4AUL|A Chain A, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUL|B Chain B, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUL|C Chain C, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUL|D Chain D, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
Length = 719
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVNCPYRVRVANYQRD-APMAIDNQNGAPNYYPN 137
P +QGRL SY+DT ++R G NF Q+P+N P RV + N RD A ++N P Y PN
Sbjct: 381 PLLQGRLFSYLDTQLNRNGGPNFEQLPINMP-RVPIHNNNRDGAGQMFIHRNKYP-YTPN 438
Query: 138 SFKGPEP------TPRGAWSTYNATGD---VKRYKTEDEDNFSQPRILWSNV 180
+ P RG ++ T V+ D++SQPR+ ++++
Sbjct: 439 TLNSGYPRQANQNAGRGFFTAPGRTASGALVREVSPTFNDHWSQPRLFFNSL 490
>pdb|4AUE|A Chain A, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUE|B Chain B, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUE|C Chain C, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUE|D Chain D, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
Length = 717
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVNCPYRVRVANYQRD-APMAIDNQNGAPNYYPN 137
P +QGRL SY+DT ++R G NF Q+P+N P RV + N RD A ++N P Y PN
Sbjct: 379 PLLQGRLFSYLDTQLNRNGGPNFEQLPINMP-RVPIHNNNRDGAGQMFIHRNKYP-YTPN 436
Query: 138 SFKGPEP------TPRGAWSTYNATGD---VKRYKTEDEDNFSQPRILWSNV 180
+ P RG ++ T V+ D++SQPR+ ++++
Sbjct: 437 TLNSGYPRQANQNAGRGFFTAPGRTASGALVREVSPTFNDHWSQPRLFFNSL 488
>pdb|4AUN|A Chain A, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUN|B Chain B, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUN|C Chain C, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUN|D Chain D, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUN|E Chain E, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUN|F Chain F, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUN|G Chain G, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUN|H Chain H, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
Length = 719
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVNCPYRVRVANYQRD-APMAIDNQNGAPNYYPN 137
P +QGRL SY+DT ++R G NF Q+P+N P RV + N RD A ++N P Y PN
Sbjct: 381 PLLQGRLFSYLDTQLNRNGGPNFEQLPINMP-RVPIHNNNRDGAGQMFIHRNKYP-YTPN 438
Query: 138 SFKGPEP------TPRGAWSTYNATGD---VKRYKTEDEDNFSQPRILWSNV 180
+ P RG ++ T V+ D++SQPR+ ++++
Sbjct: 439 TLNSGYPRQANQNAGRGFFTAPGRTASGALVREVSPTFNDHWSQPRLFFNSL 490
>pdb|4AUM|A Chain A, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUM|B Chain B, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUM|C Chain C, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUM|D Chain D, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
Length = 719
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 80 PFIQGRLHSYIDTHIHRLGA-NFNQIPVNCPYRVRVANYQRD-APMAIDNQNGAPNYYPN 137
P +QGRL SY+DT ++R G NF Q+P+N P RV + N RD A ++N P Y PN
Sbjct: 381 PLLQGRLFSYLDTQLNRNGGPNFEQLPINMP-RVPIHNNNRDGAGQMFIHRNKYP-YTPN 438
Query: 138 SFKGPEP------TPRGAWSTYNATGD---VKRYKTEDEDNFSQPRILWSNV 180
+ P RG ++ T V+ D++SQPR+ ++++
Sbjct: 439 TLNSGYPRQANQNAGRGFFTAPGRTASGALVREVSPTFNDHWSQPRLFFNSL 490
>pdb|1GWF|A Chain A, Compound Ii Structure Of Micrococcus Lysodeikticus
Catalase
Length = 503
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 49/122 (40%), Gaps = 5/122 (4%)
Query: 81 FIQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANYQRDAPMAIDNQNGAPNYYPNSFK 140
+ GR +Y D ++R+GA+ NQ+PVN P + V NY + D+ Y PNS
Sbjct: 335 MLLGRAFAYHDAQLYRVGAHVNQLPVNRP-KNAVHNYAFEGQXWYDHTGDRSTYVPNSNG 393
Query: 141 GPEPTPRG----AWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDAARDRMTTNIASV 196
G W + D+D+F Q L V D RD +A
Sbjct: 394 DSWSDETGPVDDGWEADGTLTREAQALRADDDDFGQAGTLVREVFSDQERDDFVETVAGA 453
Query: 197 LK 198
LK
Sbjct: 454 LK 455
Score = 30.0 bits (66), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 19/46 (41%)
Query: 44 DEDNFSQPRILWSNVLDDAARDRMTTNIASVLKLAAPFIQGRLHSY 89
D+D+F Q L V D RD +A LK +Q R Y
Sbjct: 423 DDDDFGQAGTLVREVFSDQERDDFVETVAGALKGVRQDVQARAFEY 468
>pdb|2A9E|A Chain A, Helicobacter Pylori Catalase Compound I
pdb|2A9E|B Chain B, Helicobacter Pylori Catalase Compound I
pdb|2IQF|A Chain A, Crystal Structure Of Helicobacter Pylori Catalase Compound
I
pdb|2IQF|B Chain B, Crystal Structure Of Helicobacter Pylori Catalase Compound
I
Length = 505
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Query: 82 IQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANYQRDAPMAIDNQNGAPNYYPNSFKG 141
+QGRL SY DTH +RLG N+ QIPVN P R + RD NY P+S G
Sbjct: 332 LQGRLFSYGDTHRYRLGVNYPQIPVNKP-RCPFHSSSRDGYXQNGYYGSLQNYTPSSLPG 390
Query: 142 PEPTPRGAWSTYNATGDVKR-------YKTEDEDNFSQPRILWSNVLDDAARDRMTTNIA 194
+ +N K Y+ +D D ++QP + ++ D ++R+ I
Sbjct: 391 YKEDKSARDPKFNLAHIEKEFEVWNWDYRADDSDYYTQPGDYYRSLPAD-EKERLHDTIG 449
Query: 195 SVL 197
L
Sbjct: 450 ESL 452
>pdb|3EJ6|A Chain A, Neurospora Crassa Catalase-3 Crystal Structure
pdb|3EJ6|B Chain B, Neurospora Crassa Catalase-3 Crystal Structure
pdb|3EJ6|C Chain C, Neurospora Crassa Catalase-3 Crystal Structure
pdb|3EJ6|D Chain D, Neurospora Crassa Catalase-3 Crystal Structure
Length = 688
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 63/111 (56%), Gaps = 11/111 (9%)
Query: 80 PFIQGRLHSYIDTHIHR-LGANFNQIPVNCPYRVRVANYQRD----APMAIDNQNGAPNY 134
P +QGRL+SY+DT ++R G NF Q+P+N P V N RD A + + + +P+Y
Sbjct: 349 PLLQGRLYSYLDTQLNRHRGPNFEQLPINRPVS-GVHNNHRDGQGQAWIHKNIHHYSPSY 407
Query: 135 YPNSF--KGPEPTPRGAWST--YNATGDVKRYKTED-EDNFSQPRILWSNV 180
+ + + RG ++T A+G + R + +D+++QPR+ ++++
Sbjct: 408 LNKGYPAQANQTVGRGFFTTPGRTASGVLNRELSATFDDHYTQPRLFFNSL 458
>pdb|1K7Q|A Chain A, Prtc From Erwinia Chrysanthemi: E189a Mutant
Length = 479
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 101 FNQIPVNCPYRVRVANYQRDAPMAIDNQNGAPNYYPNSFKGPEPTPRGAWSTYN 154
F ++ N + NY RDA +D A YYP +++G + W YN
Sbjct: 120 FTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGAGSS----WYNYN 169
>pdb|1K7I|A Chain A, Prtc From Erwinia Chrysanthemi: Y228f Mutant
Length = 479
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 101 FNQIPVNCPYRVRVANYQRDAPMAIDNQNGAPNYYPNSFKGPEPTPRGAWSTYN 154
F ++ N + NY RDA +D A YYP +++G + W YN
Sbjct: 120 FTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGAGSS----WYNYN 169
>pdb|1GO8|P Chain P, The Metzincin's Methionine: Prtc M226l Mutant
Length = 462
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 101 FNQIPVNCPYRVRVANYQRDAPMAIDNQNGAPNYYPNSFKGPEPTPRGAWSTYN 154
F ++ N + NY RDA +D A YYP +++G + W YN
Sbjct: 103 FTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGAGSS----WYNYN 152
>pdb|1K7G|A Chain A, Prtc From Erwinia Chrysanthemi
Length = 479
Score = 30.8 bits (68), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 101 FNQIPVNCPYRVRVANYQRDAPMAIDNQNGAPNYYPNSFKGPEPTPRGAWSTYN 154
F ++ N + NY RDA +D A YYP +++G + W YN
Sbjct: 120 FTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGAGSS----WYNYN 169
>pdb|3HBV|P Chain P, Prtc Methionine Mutants: M226a In-House
pdb|3HDA|P Chain P, Prtc Methionine Mutants: M226a_desy
Length = 462
Score = 30.8 bits (68), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 101 FNQIPVNCPYRVRVANYQRDAPMAIDNQNGAPNYYPNSFKGPEPTPRGAWSTYN 154
F ++ N + NY RDA +D A YYP +++G + W YN
Sbjct: 103 FTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGAGSS----WYNYN 152
>pdb|3HB2|P Chain P, Prtc Methionine Mutants: M226i
Length = 462
Score = 30.8 bits (68), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 101 FNQIPVNCPYRVRVANYQRDAPMAIDNQNGAPNYYPNSFKGPEPTPRGAWSTYN 154
F ++ N + NY RDA +D A YYP +++G + W YN
Sbjct: 103 FTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGAGSS----WYNYN 152
>pdb|3HBU|P Chain P, Prtc Methionine Mutants: M226h Desy
Length = 462
Score = 30.8 bits (68), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 101 FNQIPVNCPYRVRVANYQRDAPMAIDNQNGAPNYYPNSFKGPEPTPRGAWSTYN 154
F ++ N + NY RDA +D A YYP +++G + W YN
Sbjct: 103 FTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGAGSS----WYNYN 152
>pdb|1GO7|P Chain P, The Metzincin's Methionine: Prtc M226c-E189k Double Mutant
Length = 462
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 101 FNQIPVNCPYRVRVANYQRDAPMAIDNQNGAPNYYPNSFKGPEPTPRGAWSTYN 154
F ++ N + NY RDA +D A YYP +++G + W YN
Sbjct: 103 FTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGAGSS----WYNYN 152
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.132 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,306,387
Number of Sequences: 62578
Number of extensions: 323506
Number of successful extensions: 643
Number of sequences better than 100.0: 69
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 457
Number of HSP's gapped (non-prelim): 91
length of query: 205
length of database: 14,973,337
effective HSP length: 94
effective length of query: 111
effective length of database: 9,091,005
effective search space: 1009101555
effective search space used: 1009101555
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)