BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8831
(88 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q91428|GATA3_DANRE Transcription factor GATA-3 OS=Danio rerio GN=gata3 PE=2 SV=1
Length = 438
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 35/49 (71%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R + +R+G SCANC TT TTLWRRN NG+PVCNACGL +IN P
Sbjct: 298 RRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRP 346
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 25/49 (51%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R +T + G C NC T T LWRR+ G +CNACGL N P
Sbjct: 244 RPKTRSSSEGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRP 292
>sp|P23773|GATA3_XENLA GATA-binding factor 3 OS=Xenopus laevis GN=gata3 PE=2 SV=1
Length = 435
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 35/49 (71%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R + +R+G SCANC TT TTLWRRN NG+PVCNACGL +IN P
Sbjct: 298 RRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRP 346
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 25/49 (51%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R +T + G C NC T T LWRR+ G +CNACGL N P
Sbjct: 244 RPKTRSSTEGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRP 292
>sp|P23825|GATA3_CHICK GATA-binding factor 3 OS=Gallus gallus GN=GATA3 PE=2 SV=1
Length = 444
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 35/49 (71%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R + +R+G SCANC TT TTLWRRN NG+PVCNACGL +IN P
Sbjct: 306 RRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRP 354
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 5 FGIREQTGNKRS--GVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
FG + + + S G C NC T T LWRR+ G +CNACGL N P
Sbjct: 247 FGCKSRPKARSSTEGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRP 300
>sp|P91623|GATAC_DROME GATA-binding factor C OS=Drosophila melanogaster GN=grn PE=2 SV=1
Length = 486
Score = 69.7 bits (169), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/47 (63%), Positives = 35/47 (74%)
Query: 10 QTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
Q+ KR+G SCANC TT TTLWRRN +GEPVCNACGL ++N P
Sbjct: 311 QSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRP 357
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 22/43 (51%)
Query: 14 KRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
+ G C NC T T LWRR+ G +CNACGL N P
Sbjct: 255 REEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRP 297
>sp|Q08DV0|GATA3_BOVIN Trans-acting T-cell-specific transcription factor GATA-3 OS=Bos
taurus GN=GATA3 PE=2 SV=1
Length = 443
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 35/49 (71%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R + +R+G SCANC TT TTLWRRN NG+PVCNACGL +IN P
Sbjct: 305 RRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRP 353
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 5 FGIREQTGNKRS-GVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
FG + + + S G C NC T T LWRR+ G +CNACGL N P
Sbjct: 247 FGCKSRPKARSSTGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRP 299
>sp|P23772|GATA3_MOUSE Trans-acting T-cell-specific transcription factor GATA-3 OS=Mus
musculus GN=Gata3 PE=1 SV=1
Length = 443
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 35/49 (71%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R + +R+G SCANC TT TTLWRRN NG+PVCNACGL +IN P
Sbjct: 305 RRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRP 353
Score = 43.1 bits (100), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 24/49 (48%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R + + G C NC T T LWRR+ G +CNACGL N P
Sbjct: 251 RPKARSSTEGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRP 299
>sp|P23771|GATA3_HUMAN Trans-acting T-cell-specific transcription factor GATA-3 OS=Homo
sapiens GN=GATA3 PE=1 SV=1
Length = 443
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 35/49 (71%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R + +R+G SCANC TT TTLWRRN NG+PVCNACGL +IN P
Sbjct: 305 RRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRP 353
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 5 FGIREQTGNKRS-GVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
FG + + + S G C NC T T LWRR+ G +CNACGL N P
Sbjct: 247 FGCKSRPKARSSTGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRP 299
>sp|P43691|GATA4_CHICK Transcription factor GATA-4 (Fragment) OS=Gallus gallus GN=GATA4
PE=2 SV=1
Length = 380
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 34/49 (69%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R + ++R G+SCANC TT TTLWRRN GEPVCNACGL M + P
Sbjct: 199 RRLSASRRVGLSCANCHTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRP 247
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 21/40 (52%)
Query: 17 GVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
G C NC T LWRR+ G +CNACGL IN P
Sbjct: 154 GRECVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRP 193
>sp|Q91677|GATA4_XENLA Transcription factor GATA-4 OS=Xenopus laevis GN=gata4 PE=2 SV=1
Length = 392
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 34/49 (69%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R + ++R G+SCANC TT TTLWRRN GEPVCNACGL M + P
Sbjct: 226 RRLSASRRVGLSCANCHTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRP 274
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 21/40 (52%)
Query: 17 GVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
G C NC T LWRR+ G +CNACGL IN P
Sbjct: 181 GRECVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRP 220
>sp|O09100|GATA2_MOUSE Endothelial transcription factor GATA-2 OS=Mus musculus GN=Gata2
PE=1 SV=2
Length = 480
Score = 66.2 bits (160), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 34/49 (69%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R + +R+G CANC TT TTLWRRN NG+PVCNACGL ++N P
Sbjct: 337 RRLSAARRAGTCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNRP 385
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 24/49 (48%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R + + G C NC T T LWRR+ G +CNACGL N P
Sbjct: 283 RSKARSCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRP 331
>sp|Q924Y4|GATA2_RAT Endothelial transcription factor GATA-2 OS=Rattus norvegicus
GN=Gata2 PE=1 SV=1
Length = 480
Score = 66.2 bits (160), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 34/49 (69%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R + +R+G CANC TT TTLWRRN NG+PVCNACGL ++N P
Sbjct: 337 RRLSAARRAGTCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNRP 385
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 24/49 (48%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R + + G C NC T T LWRR+ G +CNACGL N P
Sbjct: 283 RSKARSCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRP 331
>sp|P43694|GATA4_HUMAN Transcription factor GATA-4 OS=Homo sapiens GN=GATA4 PE=1 SV=2
Length = 442
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/49 (59%), Positives = 34/49 (69%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R + ++R G+SCANC TT TTLWRRN GEPVCNACGL M + P
Sbjct: 259 RRLSASRRVGLSCANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRP 307
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 21/40 (52%)
Query: 17 GVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
G C NC T LWRR+ G +CNACGL IN P
Sbjct: 214 GRECVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRP 253
>sp|Q0Q0E4|GATA4_CANFA Transcription factor GATA-4 OS=Canis familiaris GN=GATA4 PE=2 SV=1
Length = 442
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/49 (59%), Positives = 34/49 (69%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R + ++R G+SCANC TT TTLWRRN GEPVCNACGL M + P
Sbjct: 259 RRLSASRRVGLSCANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRP 307
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 21/40 (52%)
Query: 17 GVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
G C NC T LWRR+ G +CNACGL IN P
Sbjct: 214 GRECVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRP 253
>sp|P46152|GATA4_RAT Transcription factor GATA-4 OS=Rattus norvegicus GN=Gata4 PE=1 SV=1
Length = 440
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/49 (59%), Positives = 34/49 (69%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R + ++R G+SCANC TT TTLWRRN GEPVCNACGL M + P
Sbjct: 258 RRLSASRRVGLSCANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRP 306
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 21/40 (52%)
Query: 17 GVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
G C NC T LWRR+ G +CNACGL IN P
Sbjct: 213 GRECVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRP 252
>sp|P23769|GATA2_HUMAN Endothelial transcription factor GATA-2 OS=Homo sapiens GN=GATA2
PE=1 SV=3
Length = 480
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 34/49 (69%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R + +R+G CANC TT TTLWRRN NG+PVCNACGL ++N P
Sbjct: 337 RRLSAARRAGTCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNRP 385
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 24/49 (48%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R + + G C NC T T LWRR+ G +CNACGL N P
Sbjct: 283 RSKARSCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRP 331
>sp|Q08369|GATA4_MOUSE Transcription factor GATA-4 OS=Mus musculus GN=Gata4 PE=1 SV=3
Length = 440
Score = 65.9 bits (159), Expect = 8e-11, Method: Composition-based stats.
Identities = 29/49 (59%), Positives = 34/49 (69%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R + ++R G+SCANC TT TTLWRRN GEPVCNACGL M + P
Sbjct: 258 RRLSASRRVGLSCANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRP 306
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 21/40 (52%)
Query: 17 GVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
G C NC T LWRR+ G +CNACGL IN P
Sbjct: 213 GRECVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRP 252
>sp|P23824|GATA2_CHICK GATA-binding factor 2 OS=Gallus gallus GN=GATA2 PE=2 SV=1
Length = 466
Score = 65.5 bits (158), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 34/49 (69%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R + +R+G CANC TT TTLWRRN NG+PVCNACGL ++N P
Sbjct: 323 RRLSAARRAGTCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNRP 371
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 24/49 (48%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R + + G C NC T T LWRR+ G +CNACGL N P
Sbjct: 269 RSKARSCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRP 317
>sp|P52168|PNR_DROME GATA-binding factor A OS=Drosophila melanogaster GN=pnr PE=1 SV=1
Length = 540
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 31/46 (67%)
Query: 11 TGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
T +R G+ C NC T TTLWRRNN+GEPVCNACGL +N P
Sbjct: 217 TATRRMGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRP 262
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 17 GVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAPEKIMPPIESMIS 68
G C NC T LWRR+ G +CNACGL +N P ++ P + ++S
Sbjct: 166 GRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRP--LIKPSKRLVS 215
>sp|P23770|GATA2_XENLA GATA-binding factor 2 OS=Xenopus laevis GN=gata2 PE=2 SV=1
Length = 452
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 34/49 (69%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R + +R+G CANC T+ TTLWRRN NG+PVCNACGL ++N P
Sbjct: 309 RRLSAARRAGTCCANCQTSTTTLWRRNANGDPVCNACGLYYKLHNVNRP 357
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R ++ + G C NC T T LWRR+ G +CNACGL N P
Sbjct: 255 RSKSRSCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRP 303
>sp|P70005|GAT6B_XENLA GATA-binding factor 6-B OS=Xenopus laevis GN=gata6-b PE=2 SV=1
Length = 391
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 32/44 (72%)
Query: 13 NKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
++R G++CANC TT TTLWRRN GEPVCNACGL M + P
Sbjct: 229 SRRIGLACANCHTTTTTLWRRNTEGEPVCNACGLYMKLHGVPRP 272
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 20 CANCSTTCTTLWRRNNNGEPVCNACGLI--MNTVD--INAPEKIMP 61
C NC + T LWRR+ G +CNACGL MN + + P+K +P
Sbjct: 182 CVNCGSVQTPLWRRDGTGHYLCNACGLYSKMNGLSRPLIKPQKRVP 227
>sp|P28515|ELT1_CAEEL Transcription factor elt-1 OS=Caenorhabditis elegans GN=elt-1 PE=2
SV=1
Length = 416
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 30/49 (61%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R+Q KR+G+ C NC T TTLWRRN G PVCNACGL + P
Sbjct: 260 RQQNAQKRTGIECVNCRTNTTTLWRRNGEGHPVCNACGLYFKLHKVERP 308
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 20 CANCSTTCTTLWRRNNNGEPVCNACGLIM 48
C NC T LWRR+ +G +CNACGL
Sbjct: 217 CVNCGVHNTPLWRRDGSGNYLCNACGLYF 245
>sp|Q61169|GATA6_MOUSE Transcription factor GATA-6 OS=Mus musculus GN=Gata6 PE=1 SV=3
Length = 589
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 32/44 (72%)
Query: 13 NKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
++R G+SCANC TT TTLWRRN GEPVCNACGL M + P
Sbjct: 431 SRRLGLSCANCHTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRP 474
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 20 CANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
C NC + T LWRR+ G +CNACGL ++ P
Sbjct: 384 CVNCGSIQTPLWRRDGTGHYLCNACGLYSKMNGLSRP 420
>sp|P46153|GATA6_RAT Transcription factor GATA-6 OS=Rattus norvegicus GN=Gata6 PE=2 SV=2
Length = 587
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 32/44 (72%)
Query: 13 NKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
++R G+SCANC TT TTLWRRN GEPVCNACGL M + P
Sbjct: 431 SRRLGLSCANCHTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRP 474
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 20 CANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
C NC + T LWRR+ G +CNACGL ++ P
Sbjct: 384 CVNCGSIQTPLWRRDGTGHYLCNACGLYSKMNGLSRP 420
>sp|Q92908|GATA6_HUMAN Transcription factor GATA-6 OS=Homo sapiens GN=GATA6 PE=1 SV=2
Length = 595
Score = 62.8 bits (151), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 32/44 (72%)
Query: 13 NKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
++R G+SCANC TT TTLWRRN GEPVCNACGL M + P
Sbjct: 437 SRRLGLSCANCHTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRP 480
Score = 38.9 bits (89), Expect = 0.008, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 20 CANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
C NC + T LWRR+ G +CNACGL ++ P
Sbjct: 390 CVNCGSIQTPLWRRDGTGHYLCNACGLYSKMNGLSRP 426
>sp|P43693|GATA6_CHICK Transcription factor GATA-6 OS=Gallus gallus GN=GATA6 PE=2 SV=1
Length = 387
Score = 62.8 bits (151), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 32/44 (72%)
Query: 13 NKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
++R G+SCANC TT TTLWRRN GEPVCNACGL M + P
Sbjct: 228 SRRLGLSCANCHTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRP 271
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 20 CANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
C NC + T LWRR+ G +CNACGL ++ P
Sbjct: 181 CVNCGSIQTPLWRRDGTGNYLCNACGLYTKMNGLSRP 217
>sp|Q91678|GAT6A_XENLA GATA-binding factor 6-A OS=Xenopus laevis GN=gata6-a PE=2 SV=1
Length = 391
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 13 NKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
++R G++CANC T+ TTLWRRN GEPVCNACGL M + P
Sbjct: 229 SRRIGLACANCHTSTTTLWRRNTEGEPVCNACGLYMKLHGVPRP 272
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 20 CANCSTTCTTLWRRNNNGEPVCNACGLI--MNTVD--INAPEKIMP 61
C NC + T LWRR+ G +CNACGL MN + + P+K +P
Sbjct: 182 CVNCGSVQTPLWRRDGTGHFLCNACGLYSKMNGLSRPLIKPQKRVP 227
>sp|P23767|GAT1A_XENLA GATA-binding factor 1-A OS=Xenopus laevis GN=gata1-a PE=2 SV=1
Length = 359
Score = 62.4 bits (150), Expect = 7e-10, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 13 NKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
+KR+G C+NC T+ TTLWRRN +G+PVCNACGL ++N P
Sbjct: 225 SKRAGTQCSNCHTSTTTLWRRNASGDPVCNACGLYYKLHNVNRP 268
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 21/37 (56%)
Query: 20 CANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
C NC T T LWRR+ +G +CNACGL N P
Sbjct: 178 CVNCGATVTPLWRRDMSGHYLCNACGLYHKMNGQNRP 214
>sp|P23768|GAT1B_XENLA GATA-binding factor 1-B OS=Xenopus laevis GN=gata1-b PE=2 SV=1
Length = 364
Score = 62.4 bits (150), Expect = 7e-10, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 13 NKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
+KR+G C+NC T+ TTLWRRN G+PVCNACGL ++N P
Sbjct: 227 SKRAGTQCSNCHTSTTTLWRRNAGGDPVCNACGLYYKLHNVNRP 270
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 20 CANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAPEKIMPPIESMISR 69
C NC T T LWRR+ +G +CNACGL N P I P +IS+
Sbjct: 180 CVNCGATVTPLWRRDLSGHYLCNACGLYHKMNGQNRP-LIRPKKRLIISK 228
>sp|P97489|GATA5_MOUSE Transcription factor GATA-5 OS=Mus musculus GN=Gata5 PE=2 SV=2
Length = 404
Score = 62.4 bits (150), Expect = 8e-10, Method: Composition-based stats.
Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 11 TGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
+ ++RSG+ C+NC T TTLWRRN+ GEPVCNACGL M + P
Sbjct: 241 SSSRRSGLCCSNCHTATTTLWRRNSEGEPVCNACGLYMKLHGVPRP 286
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 21/40 (52%)
Query: 17 GVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
G C NC T LWRR+ G +CNACGL +N P
Sbjct: 193 GRECVNCGALSTPLWRRDGTGHYLCNACGLYHKMNGVNRP 232
>sp|Q95JA5|GATA6_PIG Transcription factor GATA-6 (Fragment) OS=Sus scrofa GN=GATA6 PE=2
SV=2
Length = 451
Score = 61.6 bits (148), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 32/44 (72%)
Query: 13 NKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
++R G+SCANC TT TTLWRRN GEPVCNACGL M + P
Sbjct: 293 SRRLGLSCANCHTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRP 336
Score = 37.0 bits (84), Expect = 0.034, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 20 CANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
C NC + T LWRR+ G +CN CGL ++ P
Sbjct: 246 CVNCGSIQTPLWRRDGTGHYLCNRCGLYSKMNGLSGP 282
>sp|P43696|GAT5B_XENLA GATA-binding factor 5-B OS=Xenopus laevis GN=gata5-b PE=2 SV=1
Length = 388
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
+ + ++R+G+ C NC T+ TTLWRRN+ GEPVCNACGL M + P
Sbjct: 226 KRLSSSRRAGLCCTNCHTSTTTLWRRNSEGEPVCNACGLYMKLHGVPRP 274
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 21/40 (52%)
Query: 17 GVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
G C NC T LWRR+ G +CNACGL IN P
Sbjct: 181 GRECVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRP 220
>sp|P52172|SRP_DROME Box A-binding factor OS=Drosophila melanogaster GN=srp PE=1 SV=2
Length = 1264
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/39 (66%), Positives = 32/39 (82%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGL 46
R + +KR+G+SC+NC TT T+LWRRN GEPVCNACGL
Sbjct: 791 RRLSASKRAGLSCSNCHTTHTSLWRRNPAGEPVCNACGL 829
>sp|P43695|GAT5A_XENLA GATA-binding factor 5-A OS=Xenopus laevis GN=gata5-a PE=2 SV=1
Length = 390
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 33/46 (71%)
Query: 11 TGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
+ ++R+G+ C NC T+ TTLWRRN+ GEPVCNACGL M + P
Sbjct: 228 SSSRRAGLCCTNCHTSTTTLWRRNSEGEPVCNACGLYMKLHGVPRP 273
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 21/40 (52%)
Query: 17 GVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
G C NC T LWRR+ G +CNACGL +N P
Sbjct: 180 GRECVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGMNRP 219
>sp|P52167|GATAB_BOMMO Transcription factor BCFI OS=Bombyx mori GN=GATA-B PE=2 SV=1
Length = 508
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 29/49 (59%)
Query: 8 REQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
R KR G C NC TT T+LWRRN GE VCNACGL ++N P
Sbjct: 310 RRLMAAKRPGTMCTNCQTTATSLWRRNVQGETVCNACGLYFKLHNVNRP 358
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 17 GVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAPEK 58
G C NC T LW R+ G +CNACGL +N P K
Sbjct: 266 GRECVNCGAIHTPLWHRDGTGHYLCNACGLYNKMNGMNRPLK 307
>sp|P17678|GATA1_CHICK Erythroid transcription factor OS=Gallus gallus GN=GATA1 PE=1 SV=1
Length = 304
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 13 NKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
+KR+G C+NC T+ TTLWRR+ G+PVCNACGL +N P
Sbjct: 157 SKRAGTVCSNCQTSTTTLWRRSPMGDPVCNACGLYYKLHQVNRP 200
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 20/37 (54%)
Query: 20 CANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
C NC T T LWRR+ G +CNACGL N P
Sbjct: 110 CVNCGATATPLWRRDGTGHYLCNACGLYHRLNGQNRP 146
>sp|Q10655|ELT2_CAEEL Transcription factor elt-2 OS=Caenorhabditis elegans GN=elt-2 PE=2
SV=1
Length = 433
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 12 GNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAPEKIMPPIESMISRNG 71
++R G+ C+NC+ T TTLWRRN G+PVCNACGL I P M ++ +R
Sbjct: 229 ASRRQGLVCSNCNGTNTTLWRRNAEGDPVCNACGLYFKLHHIPRPTS-MKKEGALQTRKR 287
Query: 72 DALSVITSTPN 82
+ S +STP+
Sbjct: 288 KSKSGDSSTPS 298
>sp|Q01168|NUT1_MAGO7 Nitrogen regulatory protein NUT1 OS=Magnaporthe oryzae (strain
70-15 / ATCC MYA-4617 / FGSC 8958) GN=NUT1 PE=4 SV=1
Length = 956
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 9 EQTGNKRSG---VSCANCSTTCTTLWRRNNNGEPVCNACGLIM 48
+Q GN + G +C NC+T T LWRRN G+P+CNACGL +
Sbjct: 649 QQQGNNQGGDAPTTCTNCATQTTPLWRRNPEGQPLCNACGLFL 691
>sp|Q92259|SREP_PENCH GATA factor SREP OS=Penicillium chrysogenum GN=SREP PE=4 SV=1
Length = 532
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 17/88 (19%)
Query: 18 VSCANCSTTCTTLWRRNNNGEPVCNACGLI-----------MNTVDINAPEKIMP----- 61
V+C NC TT T LWRR+ G P+CNACGL M I ++++P
Sbjct: 236 VACQNCGTTVTPLWRRDEQGHPICNACGLYYKLHGCYRPTNMKKSIIKRRKRVVPALRDQ 295
Query: 62 -PIESMISRNGDALSVITSTPNIHHSDD 88
P +S NG + S S + H D
Sbjct: 296 SPTAGTLSSNGSSTSPEASPAALAHGHD 323
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 17 GVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAPEK 58
G SC+NC T T LWRR+ G +CNACGL + ++ P K
Sbjct: 91 GHSCSNCGTKSTPLWRRSPTGAMICNACGLYLKARNVARPTK 132
>sp|Q925H1|TRPS1_MOUSE Zinc finger transcription factor Trps1 OS=Mus musculus GN=Trps1
PE=1 SV=1
Length = 1281
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/31 (74%), Positives = 25/31 (80%)
Query: 16 SGVSCANCSTTCTTLWRRNNNGEPVCNACGL 46
SGV CANC TT T+LWR+N NG VCNACGL
Sbjct: 892 SGVFCANCLTTKTSLWRKNANGGYVCNACGL 922
>sp|Q9UHF7|TRPS1_HUMAN Zinc finger transcription factor Trps1 OS=Homo sapiens GN=TRPS1
PE=1 SV=2
Length = 1281
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/31 (74%), Positives = 25/31 (80%)
Query: 16 SGVSCANCSTTCTTLWRRNNNGEPVCNACGL 46
SGV CANC TT T+LWR+N NG VCNACGL
Sbjct: 892 SGVFCANCLTTKTSLWRKNANGGYVCNACGL 922
>sp|Q90ZS6|TRPS1_XENLA Zinc finger transcription factor Trps1 OS=Xenopus laevis GN=trps1
PE=1 SV=1
Length = 1271
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/31 (74%), Positives = 25/31 (80%)
Query: 16 SGVSCANCSTTCTTLWRRNNNGEPVCNACGL 46
SGV CANC TT T+LWR+N NG VCNACGL
Sbjct: 882 SGVFCANCLTTKTSLWRKNANGGYVCNACGL 912
>sp|Q01582|AREA_PENCH Nitrogen regulatory protein areA OS=Penicillium chrysogenum GN=AREA
PE=4 SV=1
Length = 725
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 6 GIREQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMN 49
G++ + N +C NC T T LWRRN G+P+CNACGL +
Sbjct: 511 GLKNGSTNAGPEPACTNCFTQTTPLWRRNPEGQPLCNACGLFLK 554
>sp|Q10280|GAF1_SCHPO Transcription factor gaf1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=gaf1 PE=1 SV=2
Length = 855
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 20 CANCSTTCTTLWRRNNNGEPVCNACGLIM 48
C NC T T LWRR+ +G+P+CNACGL M
Sbjct: 635 CTNCQTRTTPLWRRSPDGQPLCNACGLFM 663
>sp|O13508|AREA_PENRO Nitrogen regulatory protein areA OS=Penicillium roqueforti GN=AREA
PE=4 SV=2
Length = 860
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 18 VSCANCSTTCTTLWRRNNNGEPVCNACGLIM 48
+C NC T T LWRRN G+P+CNACGL +
Sbjct: 658 TTCTNCFTQTTPLWRRNPEGQPLCNACGLFL 688
>sp|Q92269|NRFA_PENUR Nitrogen regulatory protein nrfA OS=Penicillium urticae GN=nrfA
PE=4 SV=1
Length = 865
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 18 VSCANCSTTCTTLWRRNNNGEPVCNACGLIM 48
+C NC T T LWRRN G+P+CNACGL +
Sbjct: 663 TTCTNCFTQTTPLWRRNPEGQPLCNACGLFL 693
>sp|P78688|AREA_GIBFU Nitrogen regulatory protein areA OS=Gibberella fujikuroi GN=AREA
PE=3 SV=1
Length = 971
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 7 IREQTGNKRSG---VSCANCSTTCTTLWRRNNNGEPVCNACGLIM 48
++ GN G +C NC T T LWRRN G+P+CNACGL +
Sbjct: 678 LQAAAGNGNDGNAPTTCTNCFTQTTPLWRRNPEGQPLCNACGLFL 722
>sp|P17429|AREA_EMENI Nitrogen regulatory protein areA OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=areA PE=1 SV=2
Length = 876
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 10 QTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAPEKIMPPIESMISR 69
+ G + +C NC T T LWRRN G+P+CNACGL + + P + + +R
Sbjct: 663 KNGEQNGPTTCTNCFTQTTPLWRRNPEGQPLCNACGLFLKLHGVVRPLSLKTDVIKKRNR 722
Query: 70 N-GDALSVITS 79
N ++L+V +S
Sbjct: 723 NSANSLAVGSS 733
>sp|Q10134|FEP1_SCHPO Iron-sensing transcription factor 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=fep1 PE=1 SV=1
Length = 564
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 20 CANCSTTCTTLWRRNNNGEPVCNACGLIMNTVDINAP 56
C NC+TT T LWRR+ +G P+CNACGL ++ P
Sbjct: 172 CQNCATTNTPLWRRDESGNPICNACGLYYKIHGVHRP 208
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 17 GVSCANCSTTCTTLWRRNNNGEPVCNACGLIM 48
G SC+NC T T+LWRR + +CNACGL
Sbjct: 9 GQSCSNCHKTTTSLWRRGPDNSLLCNACGLYQ 40
>sp|O13412|AREA_ASPNG Nitrogen regulatory protein areA OS=Aspergillus niger GN=areA PE=4
SV=1
Length = 882
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 10 QTGNKRSG-VSCANCSTTCTTLWRRNNNGEPVCNACGLIM 48
+ G + SG +C NC T T LWRRN G+P+CNACGL +
Sbjct: 665 KNGEQSSGPTTCTNCFTQTTPLWRRNPEGQPLCNACGLFL 704
>sp|P19212|NIT2_NEUCR Nitrogen catabolic enzyme regulatory protein OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=nit-2 PE=1 SV=2
Length = 1036
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 19 SCANCSTTCTTLWRRNNNGEPVCNACGLIM 48
+C NC T T LWRRN +G+P+CNACGL +
Sbjct: 742 TCTNCFTQTTPLWRRNPDGQPLCNACGLFL 771
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,803,254
Number of Sequences: 539616
Number of extensions: 1140992
Number of successful extensions: 3083
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 2950
Number of HSP's gapped (non-prelim): 166
length of query: 88
length of database: 191,569,459
effective HSP length: 58
effective length of query: 30
effective length of database: 160,271,731
effective search space: 4808151930
effective search space used: 4808151930
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)