BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy8832
         (144 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|4HC7|A Chain A, Crystal Structure Of The Full Dna Binding Domain Of
           Gata3-Complex 2
 pdb|4HC7|B Chain B, Crystal Structure Of The Full Dna Binding Domain Of
           Gata3-Complex 2
 pdb|4HC9|A Chain A, Dna Binding By Gata Transcription Factor-Complex 3
 pdb|4HCA|A Chain A, Dna Binding By Gata Transcription Factor-Complex 1
          Length = 115

 Score =  136 bits (342), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 62/94 (65%), Positives = 77/94 (81%), Gaps = 4/94 (4%)

Query: 38  KECVNCAANSTPLWRRDGTGHHLCNACGLYNRINGVNRPPVRTNQKKALQQTGNKRSGVS 97
           +ECVNC A STPLWRRDGTGH+LCNACGLY+++NG NRP ++  ++ +      +R+G S
Sbjct: 6   RECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAA----RRAGTS 61

Query: 98  CANCSTTCTTLWRRNNNGEPVCNACGLYFKLHNV 131
           CANC TT TTLWRRN NG+PVCNACGLY+KLHN+
Sbjct: 62  CANCQTTTTTLWRRNANGDPVCNACGLYYKLHNI 95



 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 39  ECVNCAANSTPLWRRDGTGHHLCNACGLYNRINGVNRPPVRTNQKKALQQTGNKRS 94
            C NC   +T LWRR+  G  +CNACGLY +++ +NRP   T +K+ +Q    K S
Sbjct: 61  SCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPL--TMKKEGIQTRNRKMS 114



 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/34 (55%), Positives = 22/34 (64%)

Query: 95  GVSCANCSTTCTTLWRRNNNGEPVCNACGLYFKL 128
           G  C NC  T T LWRR+  G  +CNACGLY K+
Sbjct: 5   GRECVNCGATSTPLWRRDGTGHYLCNACGLYHKM 38


>pdb|3VD6|C Chain C, Both Zn Fingers Of Gata1 Bound To Palindromic Dna
           Recognition Site, P21 Crystal Form
 pdb|3VEK|C Chain C, Both Zn Fingers Of Gata1 Bound To Palindromic Dna
           Recognition Site, P1 Crystal Form
 pdb|3VEK|F Chain F, Both Zn Fingers Of Gata1 Bound To Palindromic Dna
           Recognition Site, P1 Crystal Form
          Length = 119

 Score =  114 bits (285), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/96 (62%), Positives = 75/96 (78%), Gaps = 4/96 (4%)

Query: 36  DIKECVNCAANSTPLWRRDGTGHHLCNACGLYNRINGVNRPPVRTNQKKALQQTGNKRSG 95
           + +ECVNC A +TPLWRRD TGH+LCNACGLY+++NG NRP +R  ++  +    +KR+G
Sbjct: 1   EARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQNRPLIRPKKRMIV----SKRAG 56

Query: 96  VSCANCSTTCTTLWRRNNNGEPVCNACGLYFKLHNV 131
             C NC TT TTLWRRN +G+PVCNACGLYFKLH V
Sbjct: 57  TQCTNCQTTTTTLWRRNASGDPVCNACGLYFKLHQV 92



 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 2/46 (4%)

Query: 50  LWRRDGTGHHLCNACGLYNRINGVNRPPVRTNQKKALQQTGNKRSG 95
           LWRR+ +G  +CNACGLY +++ VNRP   T +K  +Q    K SG
Sbjct: 69  LWRRNASGDPVCNACGLYFKLHQVNRPL--TMRKDGIQTRNRKASG 112


>pdb|3DFV|D Chain D, Adjacent Gata Dna Binding
 pdb|3DFV|C Chain C, Adjacent Gata Dna Binding
 pdb|3DFX|A Chain A, Opposite Gata Dna Binding
 pdb|3DFX|B Chain B, Opposite Gata Dna Binding
          Length = 63

 Score = 73.9 bits (180), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 31/40 (77%), Positives = 36/40 (90%)

Query: 92  KRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLYFKLHNV 131
           +R+G SCANC TT TTLWRRN NG+PVCNACGLY+KLHN+
Sbjct: 4   RRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNI 43



 Score = 49.3 bits (116), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 39 ECVNCAANSTPLWRRDGTGHHLCNACGLYNRINGVNRPPVRTNQKKALQQTGNKRS 94
           C NC   +T LWRR+  G  +CNACGLY +++ +NRP   T +K+ +Q    K S
Sbjct: 9  SCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPL--TMKKEGIQTRNRKMS 62


>pdb|1Y0J|A Chain A, Zinc Fingers As Protein Recognition Motifs: Structural
          Basis For The Gata-1FRIEND OF GATA INTERACTION
          Length = 46

 Score = 72.4 bits (176), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 30/44 (68%), Positives = 38/44 (86%)

Query: 36 DIKECVNCAANSTPLWRRDGTGHHLCNACGLYNRINGVNRPPVR 79
          + +ECVNC A +TPLWRRD TGH+LCNACGLY+++NG NRP +R
Sbjct: 3  EARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQNRPLIR 46



 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 21/32 (65%)

Query: 97  SCANCSTTCTTLWRRNNNGEPVCNACGLYFKL 128
            C NC  T T LWRR+  G  +CNACGLY K+
Sbjct: 6   ECVNCGATATPLWRRDRTGHYLCNACGLYHKM 37


>pdb|1GNF|A Chain A, Solution Structure Of The N-Terminal Zinc Finger Of
          Murine Gata-1, Nmr, 25 Structures
          Length = 46

 Score = 70.5 bits (171), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 29/43 (67%), Positives = 37/43 (86%)

Query: 36 DIKECVNCAANSTPLWRRDGTGHHLCNACGLYNRINGVNRPPV 78
          + +ECVNC A +TPLWRRD TGH+LCNACGLY+++NG NRP +
Sbjct: 3  EARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQNRPLI 45



 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 21/32 (65%)

Query: 97  SCANCSTTCTTLWRRNNNGEPVCNACGLYFKL 128
            C NC  T T LWRR+  G  +CNACGLY K+
Sbjct: 6   ECVNCGATATPLWRRDRTGHYLCNACGLYHKM 37


>pdb|2L6Y|A Chain A, Haddock Model Of Gata1nf:lmo2lim2-Ldb1lid
 pdb|2L6Z|A Chain A, Haddock Model Of Gata1nf:lmo2lim2-Ldb1lid With Fog
          Length = 39

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 34/39 (87%)

Query: 36 DIKECVNCAANSTPLWRRDGTGHHLCNACGLYNRINGVN 74
          + +ECVNC A +TPLWRRD TGH+LCNACGLY+++NG N
Sbjct: 1  EARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQN 39



 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 21/32 (65%)

Query: 97  SCANCSTTCTTLWRRNNNGEPVCNACGLYFKL 128
            C NC  T T LWRR+  G  +CNACGLY K+
Sbjct: 4   ECVNCGATATPLWRRDRTGHYLCNACGLYHKM 35


>pdb|3GAT|A Chain A, Solution Nmr Structure Of The C-Terminal Domain Of Chicken
           Gata-1 Bound To Dna, 34 Structures
 pdb|2GAT|A Chain A, Solution Structure Of The C-Terminal Domain Of Chicken
           Gata- 1 Bound To Dna, Nmr, Regularized Mean Structure
          Length = 66

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 27/40 (67%), Positives = 33/40 (82%)

Query: 92  KRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLYFKLHNV 131
           KR+G  C+NC T+ TTLWRR+  G+PVCNACGLY+KLH V
Sbjct: 1   KRAGTVCSNCQTSTTTLWRRSPMGDPVCNACGLYYKLHQV 40



 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 40 CVNCAANSTPLWRRDGTGHHLCNACGLYNRINGVNRP 76
          C NC  ++T LWRR   G  +CNACGLY +++ VNRP
Sbjct: 7  CSNCQTSTTTLWRRSPMGDPVCNACGLYYKLHQVNRP 43


>pdb|1GAT|A Chain A, Solution Structure Of The Specific Dna Complex Of The Zinc
           Containing Dna Binding Domain Of The Erythroid
           Transcription Factor Gata-1 By Multidimensional Nmr
 pdb|1GAU|A Chain A, Solution Structure Of The Specific Dna Complex Of The Zinc
           Containing Dna Binding Domain Of The Erythroid
           Transcription Factor Gata-1 By Multidimensional Nmr
          Length = 60

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 27/40 (67%), Positives = 33/40 (82%)

Query: 92  KRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLYFKLHNV 131
           KR+G  C+NC T+ TTLWRR+  G+PVCNACGLY+KLH V
Sbjct: 1   KRAGTVCSNCQTSTTTLWRRSPMGDPVCNACGLYYKLHQV 40



 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 40 CVNCAANSTPLWRRDGTGHHLCNACGLYNRINGVNRP 76
          C NC  ++T LWRR   G  +CNACGLY +++ VNRP
Sbjct: 7  CSNCQTSTTTLWRRSPMGDPVCNACGLYYKLHQVNRP 43


>pdb|4GAT|A Chain A, Solution Nmr Structure Of The Wild Type Dna Binding Domain
           Of Area Complexed To A 13bp Dna Containing A Cgata Site,
           Regularized Mean Structure
 pdb|5GAT|A Chain A, Solution Nmr Structure Of The Wild Type Dna Binding Domain
           Of Area Complexed To A 13bp Dna Containing A Cgata Site,
           35 Structures
          Length = 66

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 30/48 (62%)

Query: 88  QTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLYFKLHNVFTIL 135
           + G +    +C NC T  T LWRRN  G+P+CNACGL+ KLH V   L
Sbjct: 2   KNGEQNGPTTCTNCFTQTTPLWRRNPEGQPLCNACGLFLKLHGVVRPL 49



 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query: 40 CVNCAANSTPLWRRDGTGHHLCNACGLYNRINGVNRP 76
          C NC   +TPLWRR+  G  LCNACGL+ +++GV RP
Sbjct: 12 CTNCFTQTTPLWRRNPEGQPLCNACGLFLKLHGVVRP 48


>pdb|7GAT|A Chain A, Solution Nmr Structure Of The L22v Mutant Dna Binding
           Domain Of Area Complexed To A 13 Bp Dna Containing A
           Tgata Site, 34 Structures
 pdb|6GAT|A Chain A, Solution Nmr Structure Of The L22v Mutant Dna Binding
           Domain Of Area Complexed To A 13 Bp Dna Containing A
           Tgata Site, Regularized Mean Structure
          Length = 66

 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 30/48 (62%)

Query: 88  QTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLYFKLHNVFTIL 135
           + G +    +C NC T  T +WRRN  G+P+CNACGL+ KLH V   L
Sbjct: 2   KNGEQNGPTTCTNCFTQTTPVWRRNPEGQPLCNACGLFLKLHGVVRPL 49



 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 40 CVNCAANSTPLWRRDGTGHHLCNACGLYNRINGVNRP 76
          C NC   +TP+WRR+  G  LCNACGL+ +++GV RP
Sbjct: 12 CTNCFTQTTPVWRRNPEGQPLCNACGLFLKLHGVVRP 48


>pdb|2VUS|I Chain I, Crystal Structure Of Unliganded Nmra-Area Zinc Finger
           Complex
 pdb|2VUS|J Chain J, Crystal Structure Of Unliganded Nmra-Area Zinc Finger
           Complex
 pdb|2VUS|K Chain K, Crystal Structure Of Unliganded Nmra-Area Zinc Finger
           Complex
 pdb|2VUS|L Chain L, Crystal Structure Of Unliganded Nmra-Area Zinc Finger
           Complex
 pdb|2VUS|M Chain M, Crystal Structure Of Unliganded Nmra-Area Zinc Finger
           Complex
 pdb|2VUS|N Chain N, Crystal Structure Of Unliganded Nmra-Area Zinc Finger
           Complex
 pdb|2VUS|O Chain O, Crystal Structure Of Unliganded Nmra-Area Zinc Finger
           Complex
 pdb|2VUS|P Chain P, Crystal Structure Of Unliganded Nmra-Area Zinc Finger
           Complex
 pdb|2VUT|I Chain I, Crystal Structure Of Nad-Bound Nmra-Area Zinc Finger
           Complex
 pdb|2VUT|J Chain J, Crystal Structure Of Nad-Bound Nmra-Area Zinc Finger
           Complex
 pdb|2VUT|K Chain K, Crystal Structure Of Nad-Bound Nmra-Area Zinc Finger
           Complex
 pdb|2VUT|L Chain L, Crystal Structure Of Nad-Bound Nmra-Area Zinc Finger
           Complex
 pdb|2VUT|M Chain M, Crystal Structure Of Nad-Bound Nmra-Area Zinc Finger
           Complex
 pdb|2VUT|N Chain N, Crystal Structure Of Nad-Bound Nmra-Area Zinc Finger
           Complex
 pdb|2VUT|O Chain O, Crystal Structure Of Nad-Bound Nmra-Area Zinc Finger
           Complex
 pdb|2VUT|P Chain P, Crystal Structure Of Nad-Bound Nmra-Area Zinc Finger
           Complex
 pdb|2VUU|I Chain I, Crystal Structure Of Nadp-Bound Nmra-Area Zinc Finger
           Complex
 pdb|2VUU|J Chain J, Crystal Structure Of Nadp-Bound Nmra-Area Zinc Finger
           Complex
 pdb|2VUU|K Chain K, Crystal Structure Of Nadp-Bound Nmra-Area Zinc Finger
           Complex
 pdb|2VUU|L Chain L, Crystal Structure Of Nadp-Bound Nmra-Area Zinc Finger
           Complex
 pdb|2VUU|M Chain M, Crystal Structure Of Nadp-Bound Nmra-Area Zinc Finger
           Complex
 pdb|2VUU|N Chain N, Crystal Structure Of Nadp-Bound Nmra-Area Zinc Finger
           Complex
 pdb|2VUU|O Chain O, Crystal Structure Of Nadp-Bound Nmra-Area Zinc Finger
           Complex
 pdb|2VUU|P Chain P, Crystal Structure Of Nadp-Bound Nmra-Area Zinc Finger
           Complex
          Length = 43

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 27/40 (67%)

Query: 96  VSCANCSTTCTTLWRRNNNGEPVCNACGLYFKLHNVFTIL 135
            +C NC T  T LWRRN  G+P+CNACGL+ KLH V   L
Sbjct: 2   TTCTNCFTQTTPLWRRNPEGQPLCNACGLFLKLHGVVRPL 41



 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query: 40 CVNCAANSTPLWRRDGTGHHLCNACGLYNRINGVNRP 76
          C NC   +TPLWRR+  G  LCNACGL+ +++GV RP
Sbjct: 4  CTNCFTQTTPLWRRNPEGQPLCNACGLFLKLHGVVRP 40


>pdb|2KAE|A Chain A, Data-Driven Model Of Med1:dna Complex
          Length = 71

 Score = 31.6 bits (70), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)

Query: 91  NKRSGVSCANCSTTCTTLWRRNNNGEPV-CNACGLYFKLHN 130
           NK+S   C+NCS T T  WR   + E + CNAC +Y + +N
Sbjct: 5   NKKS-FQCSNCSVTETIRWRNIRSKEGIQCNACFIYQRKYN 44



 Score = 31.2 bits (69), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 33 LNMDIKECVNCAANSTPLWR--RDGTGHHLCNACGLYNRINGVNRPPVRTN--QKKALQ 87
          +N    +C NC+   T  WR  R   G   CNAC +Y R     RP    N  QK+ L+
Sbjct: 4  MNKKSFQCSNCSVTETIRWRNIRSKEGIQ-CNACFIYQRKYNKTRPVTAVNKYQKRKLK 61


>pdb|2ELA|A Chain A, Crystal Structure Of The Ptb Domain Of Human Appl1
 pdb|2ELA|B Chain B, Crystal Structure Of The Ptb Domain Of Human Appl1
          Length = 175

 Score = 30.0 bits (66), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 94  SGVSCANCSTTCTTLWRRNNNGEPVCNACGL 124
           SG S +N S+ C  ++  NN GE +C++ GL
Sbjct: 121 SGRSESNLSSVCY-IFESNNEGEKICDSVGL 150


>pdb|2EJ8|A Chain A, Crystal Structure Of Appl1 Ptb Domain At 1.8a
 pdb|2EJ8|B Chain B, Crystal Structure Of Appl1 Ptb Domain At 1.8a
          Length = 160

 Score = 30.0 bits (66), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 94  SGVSCANCSTTCTTLWRRNNNGEPVCNACGL 124
           SG S +N S+ C  ++  NN GE +C++ GL
Sbjct: 108 SGRSESNLSSVCY-IFESNNEGEKICDSVGL 137


>pdb|2HYD|A Chain A, Multidrug Abc Transporter Sav1866
 pdb|2HYD|B Chain B, Multidrug Abc Transporter Sav1866
 pdb|2ONJ|A Chain A, Structure Of The Multidrug Abc Transporter Sav1866 From
          S. Aureus In Complex With Amp-Pnp
 pdb|2ONJ|B Chain B, Structure Of The Multidrug Abc Transporter Sav1866 From
          S. Aureus In Complex With Amp-Pnp
 pdb|4A82|A Chain A, Fitted Model Of Staphylococcus Aureus Sav1866 Model Abc
          Transporter In The Human Cystic Fibrosis Transmembrane
          Conductance Regulator Volume Map Emd-1966.
 pdb|4A82|B Chain B, Fitted Model Of Staphylococcus Aureus Sav1866 Model Abc
          Transporter In The Human Cystic Fibrosis Transmembrane
          Conductance Regulator Volume Map Emd-1966.
 pdb|4A82|C Chain C, Fitted Model Of Staphylococcus Aureus Sav1866 Model Abc
          Transporter In The Human Cystic Fibrosis Transmembrane
          Conductance Regulator Volume Map Emd-1966.
 pdb|4A82|D Chain D, Fitted Model Of Staphylococcus Aureus Sav1866 Model Abc
          Transporter In The Human Cystic Fibrosis Transmembrane
          Conductance Regulator Volume Map Emd-1966
          Length = 578

 Score = 26.6 bits (57), Expect = 5.5,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 31 MMLNMDIKECVNCAANSTPLWRRDGTGHHLCNACGLYNRINGVNRPPVRTNQKKALQQTG 90
          M++ + IK  ++   N+  L   D   HHL  A G+   I  + RPP+   ++   Q T 
Sbjct: 31 MLIPLLIKYAIDGVINNHAL-TTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLAQWTS 89

Query: 91 NK 92
          NK
Sbjct: 90 NK 91


>pdb|1FGJ|A Chain A, X-Ray Structure Of Hydroxylamine Oxidoreductase
 pdb|1FGJ|B Chain B, X-Ray Structure Of Hydroxylamine Oxidoreductase
          Length = 546

 Score = 26.2 bits (56), Expect = 6.3,   Method: Composition-based stats.
 Identities = 8/16 (50%), Positives = 12/16 (75%)

Query: 38 KECVNCAANSTPLWRR 53
          K+CV C ++ TP+W R
Sbjct: 77 KDCVECHSDETPVWVR 92


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.325    0.137    0.466 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,686,295
Number of Sequences: 62578
Number of extensions: 173745
Number of successful extensions: 564
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 534
Number of HSP's gapped (non-prelim): 32
length of query: 144
length of database: 14,973,337
effective HSP length: 89
effective length of query: 55
effective length of database: 9,403,895
effective search space: 517214225
effective search space used: 517214225
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 46 (22.3 bits)