Query psy8836
Match_columns 118
No_of_seqs 129 out of 172
Neff 6.2
Searched_HMMs 46136
Date Fri Aug 16 20:24:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8836.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8836hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1983|consensus 98.5 2.3E-07 5.1E-12 84.2 5.9 104 2-118 482-589 (993)
2 cd00200 WD40 WD40 domain, foun 96.9 0.0037 8E-08 44.5 6.5 70 4-75 4-73 (289)
3 PF00400 WD40: WD domain, G-be 96.9 0.00074 1.6E-08 36.9 2.1 33 5-38 7-39 (39)
4 PTZ00420 coronin; Provisional 96.6 0.0036 7.7E-08 54.3 5.0 68 6-75 122-189 (568)
5 PTZ00421 coronin; Provisional 96.5 0.0043 9.3E-08 52.8 5.1 70 6-76 122-191 (493)
6 cd00200 WD40 WD40 domain, foun 96.4 0.0077 1.7E-07 42.8 5.1 68 7-76 175-242 (289)
7 PF12894 Apc4_WD40: Anaphase-p 96.4 0.0054 1.2E-07 36.5 3.4 33 9-42 11-43 (47)
8 PF08596 Lgl_C: Lethal giant l 96.2 0.0028 6.2E-08 52.5 2.4 88 11-112 3-95 (395)
9 PTZ00420 coronin; Provisional 96.1 0.025 5.4E-07 49.2 7.4 70 5-75 70-148 (568)
10 KOG0305|consensus 96.0 0.008 1.7E-07 51.4 3.7 70 6-77 340-411 (484)
11 KOG0278|consensus 95.9 0.021 4.7E-07 45.7 5.7 67 2-71 136-202 (334)
12 KOG1587|consensus 95.8 0.015 3.2E-07 50.5 4.7 104 10-113 243-357 (555)
13 smart00320 WD40 WD40 repeats. 95.5 0.012 2.5E-07 29.1 1.9 33 5-38 8-40 (40)
14 KOG0286|consensus 95.5 0.032 6.9E-07 45.3 5.2 71 4-75 181-251 (343)
15 PTZ00421 coronin; Provisional 95.2 0.065 1.4E-06 45.6 6.5 71 5-76 71-149 (493)
16 KOG1273|consensus 95.1 0.03 6.5E-07 46.1 4.1 61 12-74 26-86 (405)
17 KOG0302|consensus 94.9 0.014 2.9E-07 48.8 1.7 38 4-41 342-379 (440)
18 PLN00181 protein SPA1-RELATED; 94.9 0.048 1E-06 48.2 5.2 69 5-75 571-640 (793)
19 KOG0270|consensus 94.7 0.056 1.2E-06 45.7 4.8 97 8-113 285-383 (463)
20 KOG0302|consensus 93.8 0.13 2.7E-06 43.2 5.0 72 4-77 252-326 (440)
21 KOG1036|consensus 93.7 0.032 6.9E-07 45.3 1.4 35 10-45 233-267 (323)
22 PLN00181 protein SPA1-RELATED; 93.7 0.26 5.7E-06 43.6 7.1 66 10-76 533-599 (793)
23 KOG0318|consensus 93.7 0.15 3.1E-06 44.3 5.3 55 7-62 233-289 (603)
24 KOG1407|consensus 93.5 0.2 4.4E-06 40.3 5.4 69 4-74 59-127 (313)
25 KOG0650|consensus 93.2 0.1 2.3E-06 45.9 3.7 61 5-68 396-456 (733)
26 KOG0268|consensus 92.9 0.16 3.4E-06 42.5 4.2 62 11-74 189-250 (433)
27 PF11768 DUF3312: Protein of u 92.6 0.38 8.1E-06 41.9 6.2 87 10-101 260-351 (545)
28 KOG0646|consensus 92.5 0.071 1.5E-06 45.3 1.8 67 7-76 79-146 (476)
29 KOG4328|consensus 92.5 0.092 2E-06 44.7 2.4 38 5-42 182-220 (498)
30 KOG0303|consensus 92.4 0.086 1.9E-06 44.4 2.1 63 10-74 132-194 (472)
31 KOG1273|consensus 92.3 0.2 4.4E-06 41.3 4.1 57 7-66 63-119 (405)
32 PF08662 eIF2A: Eukaryotic tra 92.1 0.2 4.4E-06 37.2 3.6 61 10-74 101-164 (194)
33 KOG1188|consensus 91.3 0.11 2.4E-06 42.8 1.6 58 8-65 164-223 (376)
34 KOG0307|consensus 91.0 0.13 2.7E-06 47.6 1.8 70 5-74 112-182 (1049)
35 KOG0307|consensus 90.7 0.17 3.6E-06 46.8 2.3 71 5-77 249-321 (1049)
36 KOG0973|consensus 90.7 0.42 9.1E-06 43.9 4.8 70 5-76 125-194 (942)
37 KOG0290|consensus 90.3 0.24 5.2E-06 40.5 2.6 35 7-41 285-319 (364)
38 KOG0284|consensus 89.2 0.29 6.2E-06 41.4 2.4 64 5-68 302-365 (464)
39 KOG0310|consensus 89.2 1.5 3.1E-05 37.7 6.5 63 8-72 152-215 (487)
40 KOG0265|consensus 89.2 1.1 2.3E-05 36.7 5.5 63 8-74 131-195 (338)
41 PF08662 eIF2A: Eukaryotic tra 89.2 0.43 9.3E-06 35.4 3.1 58 10-72 60-119 (194)
42 KOG0263|consensus 88.7 0.29 6.3E-06 43.6 2.2 40 5-45 573-612 (707)
43 KOG0647|consensus 88.5 0.49 1.1E-05 38.7 3.2 58 9-69 251-309 (347)
44 KOG0282|consensus 88.3 0.94 2E-05 38.9 4.9 70 4-76 253-323 (503)
45 TIGR03866 PQQ_ABC_repeats PQQ- 88.2 0.98 2.1E-05 33.3 4.5 41 10-51 249-290 (300)
46 KOG0273|consensus 88.1 0.76 1.6E-05 39.5 4.2 67 5-75 272-339 (524)
47 KOG0322|consensus 88.0 0.47 1E-05 38.3 2.8 19 24-42 167-185 (323)
48 KOG0266|consensus 87.4 1.1 2.5E-05 37.3 4.8 67 6-75 243-310 (456)
49 KOG0284|consensus 87.1 0.33 7.2E-06 41.0 1.5 92 10-113 97-190 (464)
50 KOG0321|consensus 86.1 0.61 1.3E-05 41.4 2.6 39 5-43 140-178 (720)
51 KOG0270|consensus 85.5 1 2.2E-05 38.4 3.5 64 8-73 242-306 (463)
52 KOG0293|consensus 85.0 0.61 1.3E-05 39.7 2.0 66 8-74 268-333 (519)
53 KOG0269|consensus 84.7 0.84 1.8E-05 41.2 2.9 67 4-72 128-196 (839)
54 KOG0267|consensus 84.6 0.34 7.5E-06 43.4 0.4 69 5-75 66-134 (825)
55 KOG1523|consensus 84.6 0.94 2E-05 37.3 2.9 66 10-76 101-169 (361)
56 TIGR03866 PQQ_ABC_repeats PQQ- 84.6 2.7 5.9E-05 31.0 5.2 58 11-71 74-132 (300)
57 KOG0271|consensus 84.4 1.5 3.2E-05 37.1 4.0 67 5-72 196-266 (480)
58 KOG0264|consensus 84.4 3.4 7.3E-05 35.0 6.1 110 5-118 223-341 (422)
59 KOG1034|consensus 84.2 2.8 6.1E-05 34.8 5.5 72 4-76 130-204 (385)
60 KOG0645|consensus 84.0 1.8 3.9E-05 35.0 4.2 65 8-74 60-126 (312)
61 KOG0285|consensus 83.8 3.2 7E-05 34.9 5.7 70 4-75 230-299 (460)
62 KOG0772|consensus 83.7 3.7 8E-05 36.0 6.2 99 8-114 267-375 (641)
63 KOG1332|consensus 83.6 1.2 2.5E-05 35.8 3.0 73 6-78 53-129 (299)
64 KOG2048|consensus 83.1 1.3 2.8E-05 39.4 3.3 63 9-72 25-88 (691)
65 KOG0264|consensus 82.8 1.6 3.6E-05 36.8 3.7 68 8-76 271-340 (422)
66 KOG0272|consensus 82.7 0.93 2E-05 38.4 2.2 69 5-74 213-282 (459)
67 KOG1538|consensus 81.8 1.6 3.4E-05 39.6 3.4 99 11-117 14-118 (1081)
68 KOG0282|consensus 81.8 1.3 2.9E-05 38.0 2.8 71 4-75 209-280 (503)
69 KOG1445|consensus 81.7 2.5 5.3E-05 38.1 4.5 61 11-74 130-191 (1012)
70 PF10313 DUF2415: Uncharacteri 80.9 2.5 5.3E-05 24.8 2.9 32 10-41 1-34 (43)
71 KOG0772|consensus 80.8 4.5 9.7E-05 35.5 5.6 67 10-77 215-293 (641)
72 KOG0647|consensus 80.5 1.4 3.1E-05 36.1 2.5 66 11-76 29-95 (347)
73 KOG1272|consensus 80.3 1.1 2.5E-05 38.5 1.9 68 6-76 248-316 (545)
74 KOG0305|consensus 80.3 1.4 3.1E-05 37.9 2.5 35 10-45 218-252 (484)
75 KOG0303|consensus 80.2 9.1 0.0002 32.6 7.2 105 2-117 71-187 (472)
76 KOG1445|consensus 79.9 1.6 3.4E-05 39.4 2.7 30 10-39 628-657 (1012)
77 KOG2055|consensus 79.9 2.6 5.7E-05 36.2 3.9 61 9-72 344-406 (514)
78 KOG2066|consensus 79.4 1.3 2.8E-05 40.2 2.1 53 10-65 113-172 (846)
79 KOG0286|consensus 79.2 2.9 6.3E-05 34.2 3.8 45 6-51 52-96 (343)
80 KOG0649|consensus 77.8 2.4 5.2E-05 34.1 3.0 46 5-51 152-197 (325)
81 KOG0289|consensus 77.7 3.6 7.8E-05 35.3 4.1 68 5-73 385-452 (506)
82 PF11768 DUF3312: Protein of u 76.2 2.3 4.9E-05 37.2 2.6 34 8-42 298-331 (545)
83 KOG0294|consensus 76.0 3.5 7.5E-05 34.1 3.5 62 4-69 122-184 (362)
84 KOG0299|consensus 76.0 6.5 0.00014 33.7 5.2 99 8-112 285-389 (479)
85 KOG4640|consensus 75.7 2.1 4.5E-05 38.0 2.3 64 9-76 20-85 (665)
86 KOG2321|consensus 75.5 2.5 5.3E-05 37.5 2.6 47 4-51 170-216 (703)
87 KOG1272|consensus 75.4 2 4.3E-05 37.1 2.0 47 20-68 139-185 (545)
88 KOG0639|consensus 75.0 2.2 4.8E-05 37.4 2.2 29 13-42 469-497 (705)
89 KOG0288|consensus 74.2 5.5 0.00012 33.9 4.3 60 12-72 390-450 (459)
90 KOG0319|consensus 73.1 2.5 5.3E-05 38.1 2.1 38 5-42 143-181 (775)
91 KOG0315|consensus 73.0 3.6 7.9E-05 33.1 2.8 37 4-42 120-156 (311)
92 KOG2048|consensus 72.0 7.3 0.00016 34.9 4.7 67 8-75 109-176 (691)
93 KOG0313|consensus 71.9 4.4 9.5E-05 34.1 3.2 40 5-44 341-380 (423)
94 KOG0296|consensus 71.9 8.8 0.00019 32.2 4.9 67 8-77 105-172 (399)
95 KOG0313|consensus 71.6 5.7 0.00012 33.5 3.8 63 8-74 259-321 (423)
96 KOG2079|consensus 71.5 3.5 7.6E-05 38.8 2.7 41 10-51 131-171 (1206)
97 KOG1587|consensus 71.4 7.2 0.00016 34.1 4.5 100 5-108 394-502 (555)
98 KOG1539|consensus 71.2 6.9 0.00015 35.9 4.4 68 5-75 572-639 (910)
99 KOG0278|consensus 71.2 7.8 0.00017 31.4 4.3 39 8-47 223-261 (334)
100 KOG1446|consensus 70.2 4.4 9.6E-05 33.0 2.8 37 5-42 96-132 (311)
101 KOG1645|consensus 70.0 6.5 0.00014 33.5 3.8 61 10-72 194-254 (463)
102 KOG0265|consensus 69.3 7.7 0.00017 31.8 4.0 66 6-74 87-153 (338)
103 COG3204 Uncharacterized protei 69.2 6.9 0.00015 32.0 3.7 63 11-74 87-149 (316)
104 KOG0266|consensus 69.1 6.7 0.00014 32.8 3.8 67 7-74 286-355 (456)
105 KOG0269|consensus 68.3 5.9 0.00013 36.0 3.4 58 8-66 219-276 (839)
106 KOG0285|consensus 68.1 15 0.00032 31.1 5.5 94 7-114 275-371 (460)
107 KOG0649|consensus 67.3 16 0.00035 29.5 5.4 40 11-51 116-155 (325)
108 KOG1240|consensus 66.9 5.5 0.00012 38.1 3.0 35 10-45 1196-1230(1431)
109 PF04762 IKI3: IKI3 family; I 66.8 10 0.00022 35.1 4.7 57 9-68 75-135 (928)
110 TIGR02658 TTQ_MADH_Hv methylam 66.8 12 0.00027 30.8 4.8 56 8-66 246-311 (352)
111 KOG4283|consensus 66.7 5.8 0.00013 32.8 2.8 44 8-51 100-143 (397)
112 KOG4714|consensus 66.5 3.6 7.9E-05 33.3 1.6 38 5-42 219-256 (319)
113 KOG1983|consensus 65.5 4.7 0.0001 37.5 2.3 70 2-77 188-258 (993)
114 KOG0643|consensus 65.0 10 0.00022 30.9 3.9 62 4-68 47-108 (327)
115 KOG0294|consensus 64.9 9.7 0.00021 31.5 3.8 37 5-42 245-283 (362)
116 KOG4283|consensus 64.5 5.4 0.00012 32.9 2.3 35 8-42 42-76 (397)
117 PF06753 Bradykinin: Bradykini 64.2 3.5 7.5E-05 19.9 0.7 10 86-95 2-11 (19)
118 COG2319 FOG: WD40 repeat [Gene 63.9 13 0.00027 27.2 4.0 58 6-66 152-211 (466)
119 KOG0271|consensus 63.8 5.9 0.00013 33.6 2.4 66 4-74 404-472 (480)
120 PF06977 SdiA-regulated: SdiA- 63.7 9.5 0.00021 29.8 3.5 62 12-74 24-85 (248)
121 KOG0268|consensus 63.4 3.4 7.4E-05 34.8 0.9 42 8-49 65-106 (433)
122 KOG0295|consensus 63.3 27 0.00059 29.4 6.2 72 5-77 273-358 (406)
123 KOG2321|consensus 62.9 12 0.00027 33.3 4.2 56 10-66 229-284 (703)
124 KOG4497|consensus 62.6 12 0.00025 31.5 3.9 57 11-68 50-106 (447)
125 KOG0279|consensus 62.4 8.9 0.00019 31.2 3.1 44 7-51 190-233 (315)
126 KOG1274|consensus 61.7 15 0.00033 33.9 4.8 66 9-75 188-254 (933)
127 KOG0291|consensus 61.7 16 0.00034 33.5 4.8 97 8-114 349-446 (893)
128 KOG2055|consensus 61.3 7.9 0.00017 33.4 2.8 58 12-72 306-363 (514)
129 KOG0650|consensus 61.2 3.3 7.2E-05 36.8 0.5 101 3-118 560-665 (733)
130 KOG0293|consensus 60.3 3.7 8E-05 35.1 0.6 32 7-38 480-511 (519)
131 KOG1539|consensus 60.1 19 0.00041 33.2 5.0 46 5-51 198-243 (910)
132 KOG0318|consensus 59.1 19 0.00041 31.7 4.7 67 7-74 188-256 (603)
133 KOG0283|consensus 59.1 8.7 0.00019 34.7 2.8 59 8-68 408-466 (712)
134 PF02239 Cytochrom_D1: Cytochr 58.9 20 0.00044 29.3 4.7 51 16-69 43-93 (369)
135 KOG0276|consensus 58.8 12 0.00026 33.7 3.5 101 5-116 136-240 (794)
136 KOG0296|consensus 57.7 15 0.00031 30.9 3.6 68 5-77 60-130 (399)
137 KOG0316|consensus 57.7 9.6 0.00021 30.6 2.5 44 4-48 54-97 (307)
138 KOG0310|consensus 57.4 36 0.00078 29.5 6.0 69 7-76 108-177 (487)
139 KOG1334|consensus 57.1 6 0.00013 34.4 1.4 70 3-74 385-457 (559)
140 KOG2315|consensus 56.9 13 0.00027 32.7 3.3 60 10-73 312-374 (566)
141 KOG1274|consensus 56.7 13 0.00028 34.4 3.4 39 6-45 135-173 (933)
142 smart00564 PQQ beta-propeller 56.4 23 0.00051 17.9 3.2 24 22-45 6-29 (33)
143 KOG1446|consensus 56.1 26 0.00057 28.6 4.8 54 18-72 241-294 (311)
144 KOG2394|consensus 55.3 12 0.00027 32.9 3.0 36 11-47 334-369 (636)
145 KOG1310|consensus 55.1 9.2 0.0002 34.0 2.2 37 5-41 143-179 (758)
146 KOG2110|consensus 55.0 76 0.0016 26.8 7.4 93 7-101 127-225 (391)
147 PF04053 Coatomer_WDAD: Coatom 54.3 14 0.00031 31.2 3.2 50 11-68 110-159 (443)
148 KOG1407|consensus 53.4 27 0.00059 28.4 4.4 59 14-75 111-169 (313)
149 KOG0291|consensus 53.1 22 0.00048 32.6 4.3 39 10-49 266-304 (893)
150 KOG4547|consensus 52.4 19 0.00042 31.5 3.7 41 6-49 141-181 (541)
151 PF08596 Lgl_C: Lethal giant l 52.3 19 0.00042 29.9 3.6 38 8-47 85-122 (395)
152 KOG4640|consensus 52.2 19 0.00041 32.2 3.6 49 11-62 63-114 (665)
153 PRK01742 tolB translocation pr 51.1 44 0.00096 27.4 5.6 58 9-69 203-263 (429)
154 KOG1009|consensus 51.0 22 0.00047 30.3 3.7 63 10-74 124-186 (434)
155 KOG0315|consensus 50.9 17 0.00036 29.5 2.9 52 10-64 84-135 (311)
156 KOG0643|consensus 50.8 10 0.00022 30.9 1.6 36 5-41 283-318 (327)
157 KOG4714|consensus 50.6 19 0.0004 29.3 3.1 35 8-42 178-212 (319)
158 KOG0319|consensus 49.8 15 0.00033 33.3 2.7 44 4-48 99-143 (775)
159 KOG0279|consensus 49.5 41 0.00088 27.5 4.9 44 5-49 59-102 (315)
160 PF14655 RAB3GAP2_N: Rab3 GTPa 49.3 14 0.0003 31.2 2.3 41 7-48 305-345 (415)
161 KOG4378|consensus 49.0 74 0.0016 28.2 6.6 61 10-72 209-269 (673)
162 KOG0290|consensus 48.6 20 0.00044 29.5 3.1 68 7-74 94-172 (364)
163 KOG0292|consensus 47.7 15 0.00032 34.5 2.3 64 10-76 10-74 (1202)
164 KOG0273|consensus 47.4 23 0.0005 30.7 3.4 62 8-72 451-512 (524)
165 KOG0973|consensus 46.5 29 0.00064 32.4 4.1 69 7-76 67-152 (942)
166 KOG0646|consensus 46.5 7.3 0.00016 33.4 0.3 36 11-47 279-314 (476)
167 PF05660 DUF807: Coxiella burn 46.0 40 0.00087 24.3 3.9 71 2-72 19-104 (142)
168 KOG0263|consensus 45.6 28 0.00061 31.5 3.8 66 8-75 534-599 (707)
169 KOG0277|consensus 45.2 25 0.00054 28.5 3.1 71 5-77 100-172 (311)
170 TIGR02276 beta_rpt_yvtn 40-res 43.1 51 0.0011 17.3 4.6 29 22-50 3-32 (42)
171 KOG1036|consensus 42.4 28 0.00061 28.5 3.0 23 22-44 145-167 (323)
172 PRK01742 tolB translocation pr 40.8 61 0.0013 26.6 4.9 57 10-69 248-307 (429)
173 KOG1064|consensus 40.4 7.6 0.00016 38.8 -0.6 44 6-50 2333-2376(2439)
174 PRK02889 tolB translocation pr 38.7 89 0.0019 25.6 5.5 58 8-68 194-254 (427)
175 PF14157 YmzC: YmzC-like prote 37.1 63 0.0014 20.4 3.4 24 22-45 29-54 (63)
176 KOG2139|consensus 36.9 14 0.00029 31.3 0.4 54 12-67 101-154 (445)
177 KOG0289|consensus 36.9 24 0.00052 30.4 1.9 37 11-48 349-385 (506)
178 KOG0645|consensus 35.9 1.3E+02 0.0029 24.5 5.8 64 11-76 107-173 (312)
179 PRK05137 tolB translocation pr 35.8 98 0.0021 25.3 5.4 57 9-68 201-260 (435)
180 KOG2041|consensus 35.8 25 0.00054 32.5 1.9 27 10-37 116-142 (1189)
181 PF06977 SdiA-regulated: SdiA- 35.8 45 0.00097 26.1 3.2 60 12-72 173-240 (248)
182 KOG0281|consensus 35.0 22 0.00049 30.1 1.4 34 8-45 236-270 (499)
183 KOG4227|consensus 35.0 83 0.0018 27.2 4.8 56 8-64 148-205 (609)
184 PF15492 Nbas_N: Neuroblastoma 34.9 49 0.0011 26.7 3.3 36 8-44 41-77 (282)
185 PF14727 PHTB1_N: PTHB1 N-term 34.7 57 0.0012 27.6 3.8 37 3-39 18-54 (418)
186 PF12292 DUF3624: Protein of u 34.7 15 0.00033 24.1 0.3 13 5-17 40-52 (77)
187 KOG1009|consensus 34.7 47 0.001 28.3 3.2 32 8-40 64-95 (434)
188 KOG1240|consensus 34.5 55 0.0012 31.8 3.9 31 10-40 1049-1079(1431)
189 KOG0267|consensus 34.2 34 0.00075 31.2 2.5 45 4-49 149-193 (825)
190 PRK01029 tolB translocation pr 33.5 94 0.002 25.7 4.9 56 11-69 328-386 (428)
191 PRK03629 tolB translocation pr 33.3 92 0.002 25.7 4.8 58 9-69 242-302 (429)
192 KOG0288|consensus 33.0 1.5E+02 0.0033 25.4 6.0 93 10-114 342-442 (459)
193 KOG1063|consensus 33.0 39 0.00084 30.7 2.6 31 10-40 665-699 (764)
194 KOG2394|consensus 32.8 31 0.00068 30.5 2.0 30 10-39 220-249 (636)
195 KOG0306|consensus 32.8 53 0.0011 30.3 3.4 34 11-45 67-100 (888)
196 PRK11028 6-phosphogluconolacto 32.6 1.3E+02 0.0029 23.1 5.4 54 13-69 231-289 (330)
197 KOG0277|consensus 31.9 1E+02 0.0022 25.0 4.6 65 8-74 146-212 (311)
198 PF13570 PQQ_3: PQQ-like domai 31.7 79 0.0017 16.9 3.0 20 22-41 21-40 (40)
199 PF01394 Clathrin_propel: Clat 31.3 66 0.0014 17.7 2.6 23 17-39 11-36 (37)
200 KOG0306|consensus 30.5 53 0.0011 30.3 3.1 43 7-50 105-147 (888)
201 COG4946 Uncharacterized protei 29.6 78 0.0017 27.9 3.8 57 8-68 400-458 (668)
202 KOG3616|consensus 29.4 48 0.001 31.1 2.6 60 5-65 7-84 (1636)
203 PRK04922 tolB translocation pr 28.9 1.5E+02 0.0033 24.2 5.4 57 9-68 203-262 (433)
204 KOG1538|consensus 28.5 89 0.0019 28.8 4.1 39 6-45 50-88 (1081)
205 KOG0639|consensus 28.5 58 0.0013 28.9 2.9 36 11-47 511-546 (705)
206 KOG2139|consensus 28.3 45 0.00097 28.3 2.1 37 8-45 192-231 (445)
207 KOG2106|consensus 28.0 1E+02 0.0022 27.3 4.3 54 11-68 409-462 (626)
208 KOG1332|consensus 28.0 66 0.0014 26.0 2.9 32 7-38 205-239 (299)
209 PF06200 tify: tify domain; I 27.9 1E+02 0.0022 17.2 2.9 19 19-39 3-21 (36)
210 KOG1063|consensus 27.9 68 0.0015 29.2 3.2 43 8-51 53-98 (764)
211 KOG4547|consensus 27.3 75 0.0016 28.0 3.4 41 7-48 100-140 (541)
212 KOG0272|consensus 27.3 68 0.0015 27.6 3.0 66 8-75 302-367 (459)
213 TIGR02800 propeller_TolB tol-p 27.3 2E+02 0.0043 22.8 5.7 55 11-68 191-248 (417)
214 PF08149 BING4CT: BING4CT (NUC 26.9 31 0.00067 22.8 0.8 26 11-37 11-36 (80)
215 KOG1524|consensus 26.8 42 0.00092 29.9 1.8 34 5-39 182-215 (737)
216 KOG3881|consensus 26.7 80 0.0017 26.8 3.3 63 11-74 249-311 (412)
217 KOG0283|consensus 26.6 84 0.0018 28.6 3.6 70 4-77 364-434 (712)
218 PF02239 Cytochrom_D1: Cytochr 26.6 1.2E+02 0.0027 24.7 4.4 37 13-50 81-118 (369)
219 PRK05137 tolB translocation pr 26.5 1.5E+02 0.0032 24.3 4.9 59 8-69 244-305 (435)
220 KOG0308|consensus 25.5 94 0.002 28.2 3.7 43 8-51 212-254 (735)
221 PF04841 Vps16_N: Vps16, N-ter 25.1 1.4E+02 0.0029 24.8 4.5 56 10-68 217-274 (410)
222 KOG1645|consensus 24.7 69 0.0015 27.5 2.6 44 14-59 393-436 (463)
223 PF13360 PQQ_2: PQQ-like domai 24.7 1.7E+02 0.0037 20.9 4.5 29 21-49 35-63 (238)
224 PRK04922 tolB translocation pr 24.5 1.5E+02 0.0033 24.2 4.7 58 9-69 247-307 (433)
225 PF13619 KTSC: KTSC domain 24.2 85 0.0019 18.8 2.4 32 11-43 5-36 (60)
226 KOG2111|consensus 24.0 77 0.0017 26.3 2.7 31 8-39 225-255 (346)
227 KOG0276|consensus 23.9 1.1E+02 0.0025 27.7 3.9 42 9-51 13-54 (794)
228 PF02611 CDH: CDP-diacylglycer 23.7 45 0.00097 25.9 1.3 14 103-116 91-104 (222)
229 PF14655 RAB3GAP2_N: Rab3 GTPa 23.7 76 0.0016 26.8 2.7 19 21-39 78-96 (415)
230 KOG0308|consensus 23.0 2.6E+02 0.0055 25.5 5.9 95 11-115 173-267 (735)
231 PRK03629 tolB translocation pr 22.9 1.7E+02 0.0036 24.1 4.6 57 9-68 198-257 (429)
232 KOG1409|consensus 22.7 68 0.0015 27.0 2.2 34 3-37 62-95 (404)
233 KOG0316|consensus 22.6 77 0.0017 25.6 2.4 40 4-44 96-135 (307)
234 KOG3630|consensus 21.6 58 0.0013 31.5 1.7 54 11-67 200-257 (1405)
235 KOG2467|consensus 21.5 67 0.0014 27.5 1.9 23 23-45 342-364 (477)
236 TIGR02800 propeller_TolB tol-p 21.4 2.6E+02 0.0056 22.1 5.3 55 12-69 280-337 (417)
237 KOG2041|consensus 21.2 94 0.002 29.0 2.9 60 10-72 15-90 (1189)
238 PF14761 HPS3_N: Hermansky-Pud 20.3 69 0.0015 24.8 1.7 33 10-44 135-167 (215)
No 1
>KOG1983|consensus
Probab=98.47 E-value=2.3e-07 Score=84.16 Aligned_cols=104 Identities=32% Similarity=0.424 Sum_probs=94.1
Q ss_pred CCCCCCCcc-cchhhhhCCCCCCeEEEEeecceEEEE---eCCCCceeeEEeeccccccccccccCCcccccccCCCCCC
Q psy8836 2 PDHYKLNPG-AVEAIAEQPGSPNHIIVGYSKGLVVLW---DRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSKD 77 (118)
Q Consensus 2 ~~~y~~~p~-aV~~I~~cP~ds~~LlIgg~~G~VVl~---d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~~ 77 (118)
.++|.+|++ .+.++.+|+. ++.+.||+.+|++.+. +...+..+..+.+++.++...+.|++|..+.....
T Consensus 482 ~~~~~~~~~~~~~~~~ic~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----- 555 (993)
T KOG1983|consen 482 FDPYSDDPRLGVQKPALCKK-SGQLAVGGTAGQILTLELTDSIVTGAVSFFCADLNQDVSVFKWKGHDRLSPRSN----- 555 (993)
T ss_pred CCcccccccccCCcchhccc-ccccccccccceeeeeeecccccccceeeeehhhhhccccccccCchhcccccc-----
Confidence 478888998 9999999998 9999999999999999 44556666788888889999999999999998888
Q ss_pred CCCccccceeeCCCCCCeeeeeecCChheeeeeecccccCC
Q psy8836 78 KEPSKALLKSVSPGFQPTCLVQLHPPAAVTSLVLHTEWGEY 118 (118)
Q Consensus 78 ~~p~k~~~~~~p~G~Q~~~v~q~~Pp~~ITala~~s~~gL~ 118 (118)
++..|.|+++...+|+.||+.+++.++.+.|.++
T Consensus 556 -------~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~ 589 (993)
T KOG1983|consen 556 -------PLSLPDGFQPFVDVQDRPPAGVTQGTLASGWILV 589 (993)
T ss_pred -------ccCCCCccccceEEEecCCcceeeeccccceecc
Confidence 7789999999999999999999999999999874
No 2
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=96.93 E-value=0.0037 Score=44.46 Aligned_cols=70 Identities=16% Similarity=0.214 Sum_probs=50.3
Q ss_pred CCCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 4 HYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 4 ~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
.++.|..+|..|+++|. .+.|++|+..|.|.+||..+.+....+... ...+.++.|...++.....+.|+
T Consensus 4 ~~~~h~~~i~~~~~~~~-~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~~~ 73 (289)
T cd00200 4 TLKGHTGGVTCVAFSPD-GKLLATGSGDGTIKVWDLETGELLRTLKGH-TGPVRDVAASADGTYLASGSSDK 73 (289)
T ss_pred HhcccCCCEEEEEEcCC-CCEEEEeecCcEEEEEEeeCCCcEEEEecC-CcceeEEEECCCCCEEEEEcCCC
Confidence 35678899999999997 889999999999999998877654433322 02234667877776666555444
No 3
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=96.91 E-value=0.00074 Score=36.91 Aligned_cols=33 Identities=27% Similarity=0.599 Sum_probs=30.2
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEe
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWD 38 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d 38 (118)
|+.|..+|..|+++|. .+.|+.|+..|.|-+||
T Consensus 7 ~~~h~~~i~~i~~~~~-~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 7 FRGHSSSINSIAWSPD-GNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EESSSSSEEEEEEETT-SSEEEEEETTSEEEEEE
T ss_pred EcCCCCcEEEEEEecc-cccceeeCCCCEEEEEC
Confidence 4568889999999998 99999999999999996
No 4
>PTZ00420 coronin; Provisional
Probab=96.58 E-value=0.0036 Score=54.31 Aligned_cols=68 Identities=15% Similarity=0.117 Sum_probs=52.1
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
..|-+.|..|+|+|.....|+.|+..|.|.|||..+.+.+..+... ..+.++.|+.+|.+..+.+.|+
T Consensus 122 ~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~--~~V~SlswspdG~lLat~s~D~ 189 (568)
T PTZ00420 122 KGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMP--KKLSSLKWNIKGNLLSGTCVGK 189 (568)
T ss_pred ecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecC--CcEEEEEECCCCCEEEEEecCC
Confidence 3466789999999984445567888999999999888765444433 5678899999999987766554
No 5
>PTZ00421 coronin; Provisional
Probab=96.54 E-value=0.0043 Score=52.75 Aligned_cols=70 Identities=17% Similarity=0.247 Sum_probs=54.2
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
..|-..|..|+++|...+.|+.|+..|.|.|||..+.+.+..+... ...+.++.|+.++.+..+.+.|++
T Consensus 122 ~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h-~~~V~sla~spdG~lLatgs~Dg~ 191 (493)
T PTZ00421 122 QGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCH-SDQITSLEWNLDGSLLCTTSKDKK 191 (493)
T ss_pred cCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCC-CCceEEEEEECCCCEEEEecCCCE
Confidence 3466789999999986678999999999999999888766444321 144778899999988877776754
No 6
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=96.41 E-value=0.0077 Score=42.79 Aligned_cols=68 Identities=19% Similarity=0.280 Sum_probs=49.7
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
.+...|..|.++|. .+.|++++..|.|.+||..+.+.+..+... ...+.++.|...+.+......|++
T Consensus 175 ~~~~~i~~~~~~~~-~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~ 242 (289)
T cd00200 175 GHTGEVNSVAFSPD-GEKLLSSSSDGTIKLWDLSTGKCLGTLRGH-ENGVNSVAFSPDGYLLASGSEDGT 242 (289)
T ss_pred cCccccceEEECCC-cCEEEEecCCCcEEEEECCCCceecchhhc-CCceEEEEEcCCCcEEEEEcCCCc
Confidence 34458999999997 789999999999999999877666544221 135677788887777666554443
No 7
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=96.37 E-value=0.0054 Score=36.46 Aligned_cols=33 Identities=21% Similarity=0.338 Sum_probs=29.2
Q ss_pred cccchhhhhCCCCCCeEEEEeecceEEEEeCCCC
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTN 42 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~ 42 (118)
+..|+.++|||+ -..|.+|.++|+|.+|++.-+
T Consensus 11 ~~~v~~~~w~P~-mdLiA~~t~~g~v~v~Rl~~q 43 (47)
T PF12894_consen 11 PSRVSCMSWCPT-MDLIALGTEDGEVLVYRLNWQ 43 (47)
T ss_pred CCcEEEEEECCC-CCEEEEEECCCeEEEEECCCc
Confidence 557999999998 999999999999999988443
No 8
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=96.24 E-value=0.0028 Score=52.54 Aligned_cols=88 Identities=23% Similarity=0.289 Sum_probs=44.4
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCceee-E---EeeccccccccccccCCcccc-cccCCCCCCCCCccccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQ-I---STMNIVSDRDSFVWKGHARLS-VKHTGDSKDKEPSKALL 85 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~-~---~~v~l~~~~es~~W~~~~~~~-~~~~~d~~~~~p~k~~~ 85 (118)
+|++|+.+++ ++-|.||.++|.||||.+..++.-. . -..++-....+..+. .+++. ++.-.+
T Consensus 3 ~v~~vs~a~~-t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~di~~r~~----------- 69 (395)
T PF08596_consen 3 SVTHVSFAPE-TLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNS-PGKLTDISDRAP----------- 69 (395)
T ss_dssp -EEEEEEETT-TTEEEEEETTS-EEEEEEEE------------------S--GGGS-S-SEEE-GGG-------------
T ss_pred eEEEEEecCC-CceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCC-CcceEEehhhCC-----------
Confidence 6899999998 9999999999999999665543321 0 000100111111122 22221 111111
Q ss_pred eeeCCCCCCeeeeeecCChheeeeeec
Q psy8836 86 KSVSPGFQPTCLVQLHPPAAVTSLVLH 112 (118)
Q Consensus 86 ~~~p~G~Q~~~v~q~~Pp~~ITala~~ 112 (118)
-..-.||+|..++++. -.+||||+.+
T Consensus 70 ~~~~~gf~P~~l~~~~-~g~vtal~~S 95 (395)
T PF08596_consen 70 PSLKEGFLPLTLLDAK-QGPVTALKNS 95 (395)
T ss_dssp TT-SEEEEEEEEE----S-SEEEEEE-
T ss_pred cccccccCchhheecc-CCcEeEEecC
Confidence 1233489999999999 8999999983
No 9
>PTZ00420 coronin; Provisional
Probab=96.08 E-value=0.025 Score=49.17 Aligned_cols=70 Identities=13% Similarity=0.119 Sum_probs=48.4
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCce--------eeEEeeccccccccccccCCcccc-cccCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTA--------NQISTMNIVSDRDSFVWKGHARLS-VKHTGDS 75 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~--------~~~~~v~l~~~~es~~W~~~~~~~-~~~~~d~ 75 (118)
++.|.++|..|+++|.+.+.|+.|+..|.|-|||..+... +..+... ...+.++.|+..+... .+.+.|+
T Consensus 70 L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH-~~~V~sVaf~P~g~~iLaSgS~Dg 148 (568)
T PTZ00420 70 LKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGH-KKKISIIDWNPMNYYIMCSSGFDS 148 (568)
T ss_pred EcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecC-CCcEEEEEECCCCCeEEEEEeCCC
Confidence 4557889999999998788999999999999999865321 1111111 1345678899877654 3445454
No 10
>KOG0305|consensus
Probab=95.95 E-value=0.008 Score=51.36 Aligned_cols=70 Identities=19% Similarity=0.267 Sum_probs=58.5
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeec--ceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSK--GLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSKD 77 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~--G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~~ 77 (118)
..|-.||++|+|||--++.|.+||-+ ++|-+||-.+.+-++.+.-. .++-++.|-.+.+..++.|..+.+
T Consensus 340 ~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtg--sQVcsL~Wsk~~kEi~sthG~s~n 411 (484)
T KOG0305|consen 340 TEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTG--SQVCSLIWSKKYKELLSTHGYSEN 411 (484)
T ss_pred eccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccC--CceeeEEEcCCCCEEEEecCCCCC
Confidence 34678999999999999999999865 89999999888887766666 778899999888888888855443
No 11
>KOG0278|consensus
Probab=95.90 E-value=0.021 Score=45.74 Aligned_cols=67 Identities=21% Similarity=0.223 Sum_probs=56.4
Q ss_pred CCCCCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCccccccc
Q psy8836 2 PDHYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKH 71 (118)
Q Consensus 2 ~~~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~ 71 (118)
|.+|+.||++|...-||-+ ...+|-+-..+.|-|||-.+...++.++.+ ....|.+-+++|+.-...
T Consensus 136 p~E~~ghtg~Ir~v~wc~e-D~~iLSSadd~tVRLWD~rTgt~v~sL~~~--s~VtSlEvs~dG~ilTia 202 (334)
T KOG0278|consen 136 PKEISGHTGGIRTVLWCHE-DKCILSSADDKTVRLWDHRTGTEVQSLEFN--SPVTSLEVSQDGRILTIA 202 (334)
T ss_pred chhhcCCCCcceeEEEecc-CceEEeeccCCceEEEEeccCcEEEEEecC--CCCcceeeccCCCEEEEe
Confidence 6789999999999999998 666777778899999999999999998888 778888877777765433
No 12
>KOG1587|consensus
Probab=95.78 E-value=0.015 Score=50.52 Aligned_cols=104 Identities=19% Similarity=0.185 Sum_probs=61.2
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeecc-----ccccccccccCCccc--ccccCCCCCCCCCc-
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNI-----VSDRDSFVWKGHARL--SVKHTGDSKDKEPS- 81 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l-----~~~~es~~W~~~~~~--~~~~~~d~~~~~p~- 81 (118)
-.|..+..||.|++.|+.|--.|||++||....+-..+..... ....-.+.|-.+... +.+..+||+...=-
T Consensus 243 s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~ 322 (555)
T KOG1587|consen 243 SEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDT 322 (555)
T ss_pred CceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeeec
Confidence 4788999999988888888889999999986665421111111 133335568555444 55555587642110
Q ss_pred --ccc-ceeeCCCCCCeeeeeecCChheeeeeecc
Q psy8836 82 --KAL-LKSVSPGFQPTCLVQLHPPAAVTSLVLHT 113 (118)
Q Consensus 82 --k~~-~~~~p~G~Q~~~v~q~~Pp~~ITala~~s 113 (118)
... .-..+-......-.|.....++|+|+.+.
T Consensus 323 ~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~ 357 (555)
T KOG1587|consen 323 DMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEP 357 (555)
T ss_pred cccccchhhcccccccccccccccccceeeEeecc
Confidence 000 11122222333345666778888888765
No 13
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=95.48 E-value=0.012 Score=29.12 Aligned_cols=33 Identities=27% Similarity=0.487 Sum_probs=27.6
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEe
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWD 38 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d 38 (118)
|+.+...|..+.++|. .+.++.|+..|.+.+||
T Consensus 8 ~~~~~~~i~~~~~~~~-~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 8 LKGHTGPVTSVAFSPD-GKYLASASDDGTIKLWD 40 (40)
T ss_pred EEecCCceeEEEECCC-CCEEEEecCCCeEEEcC
Confidence 3445568999999997 68999999999999985
No 14
>KOG0286|consensus
Probab=95.46 E-value=0.032 Score=45.34 Aligned_cols=71 Identities=18% Similarity=0.220 Sum_probs=61.0
Q ss_pred CCCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 4 HYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 4 ~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
.|..|-+-|-.|++-|+|.+.++-|+..+.--|||......++.|+.+ ..|+.++..+..|--|.+.+.|+
T Consensus 181 ~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~gh-esDINsv~ffP~G~afatGSDD~ 251 (343)
T KOG0286|consen 181 VFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGH-ESDINSVRFFPSGDAFATGSDDA 251 (343)
T ss_pred EecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeeccc-ccccceEEEccCCCeeeecCCCc
Confidence 477789999999999988999999999999999999999999888865 25788888888888887766554
No 15
>PTZ00421 coronin; Provisional
Probab=95.16 E-value=0.065 Score=45.65 Aligned_cols=71 Identities=11% Similarity=0.116 Sum_probs=47.4
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCce-------eeEEeeccccccccccccCCc-ccccccCCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTA-------NQISTMNIVSDRDSFVWKGHA-RLSVKHTGDSK 76 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~-------~~~~~v~l~~~~es~~W~~~~-~~~~~~~~d~~ 76 (118)
.+.|-++|..++++|.|.+.|+.|+..|.|.+||..+... +..+... ...+.++.|+..+ ....+.+.|+.
T Consensus 71 l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH-~~~V~~l~f~P~~~~iLaSgs~Dgt 149 (493)
T PTZ00421 71 LLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGH-TKKVGIVSFHPSAMNVLASAGADMV 149 (493)
T ss_pred EeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCC-CCcEEEEEeCcCCCCEEEEEeCCCE
Confidence 3446779999999997688999999999999998765421 1111111 0334567788765 45556555643
No 16
>KOG1273|consensus
Probab=95.13 E-value=0.03 Score=46.08 Aligned_cols=61 Identities=21% Similarity=0.294 Sum_probs=47.6
Q ss_pred chhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCC
Q psy8836 12 VEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 12 V~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d 74 (118)
-+.+.+++- -..|.+|.+.|-|||||+.|-.+..++... +-++.|++|...|+.-.+++.|
T Consensus 26 a~~~~Fs~~-G~~lAvGc~nG~vvI~D~~T~~iar~lsaH-~~pi~sl~WS~dgr~LltsS~D 86 (405)
T KOG1273|consen 26 AECCQFSRW-GDYLAVGCANGRVVIYDFDTFRIARMLSAH-VRPITSLCWSRDGRKLLTSSRD 86 (405)
T ss_pred cceEEeccC-cceeeeeccCCcEEEEEccccchhhhhhcc-ccceeEEEecCCCCEeeeecCC
Confidence 445566665 778999999999999999998876544433 2456799999999998888866
No 17
>KOG0302|consensus
Probab=94.94 E-value=0.014 Score=48.79 Aligned_cols=38 Identities=16% Similarity=0.372 Sum_probs=34.3
Q ss_pred CCCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCC
Q psy8836 4 HYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTT 41 (118)
Q Consensus 4 ~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~ 41 (118)
.||-|-.+|..|.|+|.+.+.|.++|..-||.|||++.
T Consensus 342 ~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsv 379 (440)
T KOG0302|consen 342 TFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSV 379 (440)
T ss_pred eEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeec
Confidence 46778899999999999999999999999999997643
No 18
>PLN00181 protein SPA1-RELATED; Provisional
Probab=94.90 E-value=0.048 Score=48.19 Aligned_cols=69 Identities=16% Similarity=0.170 Sum_probs=48.8
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeecccccccccccc-CCcccccccCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWK-GHARLSVKHTGDS 75 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~-~~~~~~~~~~~d~ 75 (118)
++.|.+.|..|+++|.|.+.|+.|+..|.|.+||..+...+..+... ..+.++.|. ..+....+.+.|+
T Consensus 571 ~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~--~~v~~v~~~~~~g~~latgs~dg 640 (793)
T PLN00181 571 MKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK--ANICCVQFPSESGRSLAFGSADH 640 (793)
T ss_pred ecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC--CCeEEEEEeCCCCCEEEEEeCCC
Confidence 44577889999999977888999999999999999887666544433 444556663 3455555554443
No 19
>KOG0270|consensus
Probab=94.73 E-value=0.056 Score=45.73 Aligned_cols=97 Identities=18% Similarity=0.271 Sum_probs=63.1
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCC-CceeeEEeeccccccccccccCCcccc-cccCCCCCCCCCccccc
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTT-NTANQISTMNIVSDRDSFVWKGHARLS-VKHTGDSKDKEPSKALL 85 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~-~~~~~~~~v~l~~~~es~~W~~~~~~~-~~~~~d~~~~~p~k~~~ 85 (118)
|-+.|+.++|+|..+..||-|+-.|+|.|+|... .+.-..|.++ .++|.+.|+.+.... .++..||....- -
T Consensus 285 ~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~--g~VEkv~w~~~se~~f~~~tddG~v~~~----D 358 (463)
T KOG0270|consen 285 HGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFD--GEVEKVAWDPHSENSFFVSTDDGTVYYF----D 358 (463)
T ss_pred cCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEec--cceEEEEecCCCceeEEEecCCceEEee----e
Confidence 4458999999999888888888899999998763 2333456677 889999998876654 455445643100 1
Q ss_pred eeeCCCCCCeeeeeecCChheeeeeecc
Q psy8836 86 KSVSPGFQPTCLVQLHPPAAVTSLVLHT 113 (118)
Q Consensus 86 ~~~p~G~Q~~~v~q~~Pp~~ITala~~s 113 (118)
.+.+| +|--.+|- --+.|+.|++|.
T Consensus 359 -~R~~~-~~vwt~~A-Hd~~ISgl~~n~ 383 (463)
T KOG0270|consen 359 -IRNPG-KPVWTLKA-HDDEISGLSVNI 383 (463)
T ss_pred -cCCCC-CceeEEEe-ccCCcceEEecC
Confidence 12334 33222222 234688887775
No 20
>KOG0302|consensus
Probab=93.79 E-value=0.13 Score=43.16 Aligned_cols=72 Identities=18% Similarity=0.267 Sum_probs=53.1
Q ss_pred CCCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCC---ceeeEEeeccccccccccccCCcccccccCCCCCC
Q psy8836 4 HYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTN---TANQISTMNIVSDRDSFVWKGHARLSVKHTGDSKD 77 (118)
Q Consensus 4 ~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~---~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~~ 77 (118)
+|-.|-.+|+-|+|.|...+.|.-++..|.|-|||..+. -.+.+---+ .|+.=+.|.++..+-.+.+.||..
T Consensus 252 Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~--sDVNVISWnr~~~lLasG~DdGt~ 326 (440)
T KOG0302|consen 252 PFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHN--SDVNVISWNRREPLLASGGDDGTL 326 (440)
T ss_pred cccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccC--CceeeEEccCCcceeeecCCCceE
Confidence 344466799999999998999999999999999988665 333232233 567777899998865565555654
No 21
>KOG1036|consensus
Probab=93.72 E-value=0.032 Score=45.29 Aligned_cols=35 Identities=31% Similarity=0.377 Sum_probs=31.9
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCcee
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTAN 45 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~ 45 (118)
.+|.+|+.+|. .++|.-||..|.|.+||..+++-+
T Consensus 233 yPVNai~Fhp~-~~tfaTgGsDG~V~~Wd~~~rKrl 267 (323)
T KOG1036|consen 233 YPVNAIAFHPI-HGTFATGGSDGIVNIWDLFNRKRL 267 (323)
T ss_pred EEeceeEeccc-cceEEecCCCceEEEccCcchhhh
Confidence 58999999999 999999999999999998777554
No 22
>PLN00181 protein SPA1-RELATED; Provisional
Probab=93.67 E-value=0.26 Score=43.60 Aligned_cols=66 Identities=12% Similarity=0.123 Sum_probs=48.6
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccC-CcccccccCCCCC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKG-HARLSVKHTGDSK 76 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~-~~~~~~~~~~d~~ 76 (118)
..|..+.|+|.+.+.|+.|+..|.|.|||..+.+.+..+... ...+.++.|+. .+.+..+.+.|+.
T Consensus 533 ~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H-~~~V~~l~~~p~~~~~L~Sgs~Dg~ 599 (793)
T PLN00181 533 SKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEH-EKRVWSIDYSSADPTLLASGSDDGS 599 (793)
T ss_pred CceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCC-CCCEEEEEEcCCCCCEEEEEcCCCE
Confidence 467789999877888999999999999999887766544322 13356778874 5677777776654
No 23
>KOG0318|consensus
Probab=93.65 E-value=0.15 Score=44.32 Aligned_cols=55 Identities=16% Similarity=0.362 Sum_probs=45.6
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccc--ccccccccc
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIV--SDRDSFVWK 62 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~--~~~es~~W~ 62 (118)
-|-|.|=+|+|.|. +.+++-++..-.+-|||-.+.+.++.+.+.=. .++=+..|+
T Consensus 233 aHkGsIfalsWsPD-s~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq 289 (603)
T KOG0318|consen 233 AHKGSIFALSWSPD-STQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ 289 (603)
T ss_pred CccccEEEEEECCC-CceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEe
Confidence 47789999999996 99999999999999999999999888776522 333466788
No 24
>KOG1407|consensus
Probab=93.46 E-value=0.2 Score=40.32 Aligned_cols=69 Identities=12% Similarity=0.280 Sum_probs=52.0
Q ss_pred CCCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCC
Q psy8836 4 HYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 4 ~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d 74 (118)
.|+.|-..|+++.|.|.++..|..++..-.|.+||..+..-...++.+ .+--...|...|....-.+.|
T Consensus 59 ~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~--~eni~i~wsp~g~~~~~~~kd 127 (313)
T KOG1407|consen 59 VYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETK--GENINITWSPDGEYIAVGNKD 127 (313)
T ss_pred cccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeecc--CcceEEEEcCCCCEEEEecCc
Confidence 467788899999999999999999999999999998777665554433 222234688888777544433
No 25
>KOG0650|consensus
Probab=93.15 E-value=0.1 Score=45.90 Aligned_cols=61 Identities=23% Similarity=0.467 Sum_probs=53.5
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccc
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLS 68 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~ 68 (118)
|+.|-+.|..|+..|. -.-|.-|+..|.|-||...|..-+.++.++ ..+.++.|...+...
T Consensus 396 yrGHtg~Vr~iSvdp~-G~wlasGsdDGtvriWEi~TgRcvr~~~~d--~~I~~vaw~P~~~~~ 456 (733)
T KOG0650|consen 396 YRGHTGLVRSISVDPS-GEWLASGSDDGTVRIWEIATGRCVRTVQFD--SEIRSVAWNPLSDLC 456 (733)
T ss_pred EeccCCeEEEEEecCC-cceeeecCCCCcEEEEEeecceEEEEEeec--ceeEEEEecCCCCce
Confidence 7889999999999996 666677778899999999999999888999 999999998777655
No 26
>KOG0268|consensus
Probab=92.88 E-value=0.16 Score=42.48 Aligned_cols=62 Identities=15% Similarity=0.205 Sum_probs=51.3
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCC
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d 74 (118)
.|-.|..||-.++.|..+++.+-|+|||..+...++-+... -.-.+++|..++-.|+..+-|
T Consensus 189 ti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~--mRTN~IswnPeafnF~~a~ED 250 (433)
T KOG0268|consen 189 SISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILT--MRTNTICWNPEAFNFVAANED 250 (433)
T ss_pred ceeEEecCCCcchheeeeccCCceEEEecccCCccceeeee--ccccceecCccccceeecccc
Confidence 67889999998999999999999999999999888766666 457789999977666655544
No 27
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=92.57 E-value=0.38 Score=41.86 Aligned_cols=87 Identities=16% Similarity=0.332 Sum_probs=54.7
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCCCC-----CCcccc
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSKDK-----EPSKAL 84 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~~~-----~p~k~~ 84 (118)
..|..-+.+|. ..+|++|.+.|.|++||...+-.. .....+. -.-++||..|..++-.+.-|... ..+-.
T Consensus 260 s~v~~ca~sp~-E~kLvlGC~DgSiiLyD~~~~~t~-~~ka~~~--P~~iaWHp~gai~~V~s~qGelQ~FD~ALspi~- 334 (545)
T PF11768_consen 260 SQVICCARSPS-EDKLVLGCEDGSIILYDTTRGVTL-LAKAEFI--PTLIAWHPDGAIFVVGSEQGELQCFDMALSPIK- 334 (545)
T ss_pred CcceEEecCcc-cceEEEEecCCeEEEEEcCCCeee-eeeeccc--ceEEEEcCCCcEEEEEcCCceEEEEEeecCccc-
Confidence 35666678887 999999999999999998666442 3333322 34568999999886555334321 11100
Q ss_pred ceeeCCCCCCeeeeeec
Q psy8836 85 LKSVSPGFQPTCLVQLH 101 (118)
Q Consensus 85 ~~~~p~G~Q~~~v~q~~ 101 (118)
.....-..+|..++|+.
T Consensus 335 ~qLlsEd~~P~~~L~Ls 351 (545)
T PF11768_consen 335 MQLLSEDATPKSTLQLS 351 (545)
T ss_pred eeeccccCCCccEEeee
Confidence 22233456666666664
No 28
>KOG0646|consensus
Probab=92.51 E-value=0.071 Score=45.29 Aligned_cols=67 Identities=13% Similarity=0.245 Sum_probs=49.9
Q ss_pred CCcccchhhhhCCCCCCeEEEEe-ecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGY-SKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg-~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
-=||.|.+|+..|. |.+++|| .+|.+-+|.+++++.+..+... -|.+..+..-+++..+++.+.||.
T Consensus 79 v~Pg~v~al~s~n~--G~~l~ag~i~g~lYlWelssG~LL~v~~aH-YQ~ITcL~fs~dgs~iiTgskDg~ 146 (476)
T KOG0646|consen 79 VLPGPVHALASSNL--GYFLLAGTISGNLYLWELSSGILLNVLSAH-YQSITCLKFSDDGSHIITGSKDGA 146 (476)
T ss_pred ccccceeeeecCCC--ceEEEeecccCcEEEEEeccccHHHHHHhh-ccceeEEEEeCCCcEEEecCCCcc
Confidence 35899999999985 7777887 9999999999999776433211 155666667777888777776654
No 29
>KOG4328|consensus
Probab=92.49 E-value=0.092 Score=44.71 Aligned_cols=38 Identities=24% Similarity=0.362 Sum_probs=30.6
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeec-ceEEEEeCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSK-GLVVLWDRTTN 42 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~-G~VVl~d~~~~ 42 (118)
||-.++.|..++++|...++|+++|.. |+|=+||+.++
T Consensus 182 ~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~ 220 (498)
T KOG4328|consen 182 AKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQ 220 (498)
T ss_pred eEecccceEEEEecccCcceEEEEccCCCcEEEEecCCC
Confidence 555789999999999977677766654 99999998533
No 30
>KOG0303|consensus
Probab=92.45 E-value=0.086 Score=44.41 Aligned_cols=63 Identities=19% Similarity=0.230 Sum_probs=50.6
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d 74 (118)
+.|-.++|||.-.+-|+-||..-.|.+||..+++++-. ++-..-+-|..|...|.++.+...|
T Consensus 132 rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~--l~hpd~i~S~sfn~dGs~l~TtckD 194 (472)
T KOG0303|consen 132 RRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALIT--LDHPDMVYSMSFNRDGSLLCTTCKD 194 (472)
T ss_pred eeEEEEeecccchhhHhhccCCceEEEEeccCCceeee--cCCCCeEEEEEeccCCceeeeeccc
Confidence 57888999999899999999999999999999998633 3322446678888888888666645
No 31
>KOG1273|consensus
Probab=92.30 E-value=0.2 Score=41.31 Aligned_cols=57 Identities=11% Similarity=0.164 Sum_probs=48.8
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcc
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHAR 66 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~ 66 (118)
.|-++|+.|+|.+. -|+|+-+...-.|.+||+.....++++..+ ..+-+..||.+.+
T Consensus 63 aH~~pi~sl~WS~d-gr~LltsS~D~si~lwDl~~gs~l~rirf~--spv~~~q~hp~k~ 119 (405)
T KOG1273|consen 63 AHVRPITSLCWSRD-GRKLLTSSRDWSIKLWDLLKGSPLKRIRFD--SPVWGAQWHPRKR 119 (405)
T ss_pred ccccceeEEEecCC-CCEeeeecCCceeEEEeccCCCceeEEEcc--CccceeeeccccC
Confidence 36789999999996 999999999999999999999988877777 7777777776554
No 32
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=92.12 E-value=0.2 Score=37.21 Aligned_cols=61 Identities=15% Similarity=0.242 Sum_probs=46.0
Q ss_pred ccchhhhhCCCCCCeEEEEee---cceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYS---KGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~---~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d 74 (118)
.++..|.|+|. .+.|++||- +|.|-+||..+.+.+....-. ....+.|..+|+.+++..+.
T Consensus 101 ~~~n~i~wsP~-G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~---~~t~~~WsPdGr~~~ta~t~ 164 (194)
T PF08662_consen 101 QPRNTISWSPD-GRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHS---DATDVEWSPDGRYLATATTS 164 (194)
T ss_pred CCceEEEECCC-CCEEEEEEccCCCcEEEEEECCCCEEeeccccC---cEEEEEEcCCCCEEEEEEec
Confidence 46678999998 889998874 478999999877776443322 24567899999999877643
No 33
>KOG1188|consensus
Probab=91.34 E-value=0.11 Score=42.85 Aligned_cols=58 Identities=22% Similarity=0.386 Sum_probs=40.3
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeE--EeeccccccccccccCCc
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQI--STMNIVSDRDSFVWKGHA 65 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~--~~v~l~~~~es~~W~~~~ 65 (118)
|---|++|.++|.|+++|+-|.+.|+|-|||.+....... -.+|--..+....|.+.+
T Consensus 164 H~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ 223 (376)
T KOG1188|consen 164 HNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKK 223 (376)
T ss_pred ccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCC
Confidence 3346899999999999999999999999997654422211 123322445566677766
No 34
>KOG0307|consensus
Probab=91.02 E-value=0.13 Score=47.63 Aligned_cols=70 Identities=14% Similarity=0.235 Sum_probs=53.7
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEE-eeccccccccccccCCcccccccCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIS-TMNIVSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~-~v~l~~~~es~~W~~~~~~~~~~~~d 74 (118)
++.|.|+|..|.+||.-.+-|.=|+..|.|.|||+.+-+.--.. ..+.++++.++.|...-..-..+.++
T Consensus 112 ~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~ 182 (1049)
T KOG0307|consen 112 KSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSP 182 (1049)
T ss_pred hcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCC
Confidence 67799999999999996668888889999999999776554222 33455788899998877666555544
No 35
>KOG0307|consensus
Probab=90.75 E-value=0.17 Score=46.85 Aligned_cols=71 Identities=10% Similarity=0.134 Sum_probs=49.5
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccc-cccccccCCcc-cccccCCCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSD-RDSFVWKGHAR-LSVKHTGDSKD 77 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~-~es~~W~~~~~-~~~~~~~d~~~ 77 (118)
|..|=..|-.++||++|++.|+--|..+.|+.|+..+.|++.-+..+ .+ .-.+.|-...+ ++....-||+.
T Consensus 249 ~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~--~nW~fdv~w~pr~P~~~A~asfdgkI 321 (1049)
T KOG0307|consen 249 LEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQ--GNWCFDVQWCPRNPSVMAAASFDGKI 321 (1049)
T ss_pred hcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCC--CcceeeeeecCCCcchhhhheeccce
Confidence 45567789999999999999999999999999999999998543331 11 12234654444 44444444443
No 36
>KOG0973|consensus
Probab=90.74 E-value=0.42 Score=43.94 Aligned_cols=70 Identities=11% Similarity=0.165 Sum_probs=57.5
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
|+.|+.-|.-+.|.|. ...|.-++....|+|||.++-+.+.++..- +.-..++.|...|+++.+.+.|.+
T Consensus 125 l~~H~~DV~Dv~Wsp~-~~~lvS~s~DnsViiwn~~tF~~~~vl~~H-~s~VKGvs~DP~Gky~ASqsdDrt 194 (942)
T KOG0973|consen 125 LRGHDSDVLDVNWSPD-DSLLVSVSLDNSVIIWNAKTFELLKVLRGH-QSLVKGVSWDPIGKYFASQSDDRT 194 (942)
T ss_pred EecCCCccceeccCCC-ccEEEEecccceEEEEccccceeeeeeecc-cccccceEECCccCeeeeecCCce
Confidence 3458899999999994 999999999999999999998887766544 234578999999999987776643
No 37
>KOG0290|consensus
Probab=90.33 E-value=0.24 Score=40.51 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=31.6
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTT 41 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~ 41 (118)
.|-+.|..|+|.|..+..||-||..-|+.+||+.+
T Consensus 285 ~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q 319 (364)
T KOG0290|consen 285 NHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQ 319 (364)
T ss_pred cCcccccceEecCCCCceeeecCCcceEEEEeccc
Confidence 36679999999999999999999999999998744
No 38
>KOG0284|consensus
Probab=89.23 E-value=0.29 Score=41.39 Aligned_cols=64 Identities=16% Similarity=0.113 Sum_probs=42.5
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccc
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLS 68 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~ 68 (118)
||.|---|..+.|+|-+.+.|..||..|.|+.|..-.++.+..+..-=...+-|+.||.-|-..
T Consensus 302 ~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil 365 (464)
T KOG0284|consen 302 YRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHIL 365 (464)
T ss_pred hhcchhhheeeccccccccceeeccCCCceEEEeccccccccCCCcccccceeeeeccccceeE
Confidence 4556667889999999999999999999999996654433321111100334466677555544
No 39
>KOG0310|consensus
Probab=89.19 E-value=1.5 Score=37.70 Aligned_cols=63 Identities=17% Similarity=0.163 Sum_probs=46.7
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCc-eeeEEeeccccccccccccCCcccccccC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNT-ANQISTMNIVSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~-~~~~~~v~l~~~~es~~W~~~~~~~~~~~ 72 (118)
|--.|..+++.|.+..+++-||=.|.|-+||..+.. .+--+.-. +++|++.--+.|.+..+.+
T Consensus 152 htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnhg--~pVe~vl~lpsgs~iasAg 215 (487)
T KOG0310|consen 152 HTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNHG--CPVESVLALPSGSLIASAG 215 (487)
T ss_pred CcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEecCC--CceeeEEEcCCCCEEEEcC
Confidence 445788999999977788889999999999987763 32223344 7788887777777766555
No 40
>KOG0265|consensus
Probab=89.17 E-value=1.1 Score=36.74 Aligned_cols=63 Identities=16% Similarity=0.231 Sum_probs=46.6
Q ss_pred CcccchhhhhCCCCCCe--EEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCC
Q psy8836 8 NPGAVEAIAEQPGSPNH--IIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~--LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d 74 (118)
|-.=|..+. |.+-|. ++-|.-.|++-|||..++++++.++.. .++.+|.|+..+.+..+..-|
T Consensus 131 h~~~vNs~~--p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~k--yqltAv~f~d~s~qv~sggId 195 (338)
T KOG0265|consen 131 HTSFVNSLD--PSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENK--YQLTAVGFKDTSDQVISGGID 195 (338)
T ss_pred ccceeeecC--ccccCCeEEEecCCCceEEEEeecccchhhccccc--eeEEEEEecccccceeecccc
Confidence 333444444 554444 444555699999999999999988777 889999999988887777655
No 41
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=89.17 E-value=0.43 Score=35.44 Aligned_cols=58 Identities=21% Similarity=0.267 Sum_probs=42.2
Q ss_pred ccchhhhhCCCCCCeEEEE-e-ecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccC
Q psy8836 10 GAVEAIAEQPGSPNHIIVG-Y-SKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIg-g-~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~ 72 (118)
++|..++|+|. .++|+|. | ..+.|.+||...+.+.. +. . ..+..+.|..+|++....+
T Consensus 60 ~~I~~~~WsP~-g~~favi~g~~~~~v~lyd~~~~~i~~-~~-~--~~~n~i~wsP~G~~l~~~g 119 (194)
T PF08662_consen 60 GPIHDVAWSPN-GNEFAVIYGSMPAKVTLYDVKGKKIFS-FG-T--QPRNTISWSPDGRFLVLAG 119 (194)
T ss_pred CceEEEEECcC-CCEEEEEEccCCcccEEEcCcccEeEe-ec-C--CCceEEEECCCCCEEEEEE
Confidence 46999999997 7777654 3 34799999997554432 22 2 4567789999999887665
No 42
>KOG0263|consensus
Probab=88.71 E-value=0.29 Score=43.63 Aligned_cols=40 Identities=25% Similarity=0.453 Sum_probs=35.5
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCcee
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTAN 45 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~ 45 (118)
|..|-++|.++..+|. -+.|.-|++.|.|.|||..+.+.+
T Consensus 573 F~GH~~~V~al~~Sp~-Gr~LaSg~ed~~I~iWDl~~~~~v 612 (707)
T KOG0263|consen 573 FTGHKGPVTALAFSPC-GRYLASGDEDGLIKIWDLANGSLV 612 (707)
T ss_pred ecCCCCceEEEEEcCC-CceEeecccCCcEEEEEcCCCcch
Confidence 4568899999999996 999999999999999999886554
No 43
>KOG0647|consensus
Probab=88.53 E-value=0.49 Score=38.73 Aligned_cols=58 Identities=19% Similarity=0.254 Sum_probs=42.9
Q ss_pred cccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeE-EeeccccccccccccCCccccc
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQI-STMNIVSDRDSFVWKGHARLSV 69 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~-~~v~l~~~~es~~W~~~~~~~~ 69 (118)
=+||..|+.||. .|+|.-+|..|....||-....-+.. -..+ +.+..-..++.|..+.
T Consensus 251 VYaVNsi~FhP~-hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~--qpItcc~fn~~G~ifa 309 (347)
T KOG0647|consen 251 VYAVNSIAFHPV-HGTLVTAGSDGTFSFWDKDARTKLKTSETHP--QPITCCSFNRNGSIFA 309 (347)
T ss_pred eEEecceEeecc-cceEEEecCCceEEEecchhhhhhhccCcCC--CccceeEecCCCCEEE
Confidence 369999999997 99999999999999997644433321 1233 6666666777777774
No 44
>KOG0282|consensus
Probab=88.29 E-value=0.94 Score=38.88 Aligned_cols=70 Identities=11% Similarity=0.125 Sum_probs=55.3
Q ss_pred CCCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCc-ccccccCCCCC
Q psy8836 4 HYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHA-RLSVKHTGDSK 76 (118)
Q Consensus 4 ~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~-~~~~~~~~d~~ 76 (118)
.|..|-.+|..+.++.. -..++-++=.+.+-+||..|+++.+++..+ .-...+..|-++ ..|....+|++
T Consensus 253 tf~gH~k~Vrd~~~s~~-g~~fLS~sfD~~lKlwDtETG~~~~~f~~~--~~~~cvkf~pd~~n~fl~G~sd~k 323 (503)
T KOG0282|consen 253 TFKGHRKPVRDASFNNC-GTSFLSASFDRFLKLWDTETGQVLSRFHLD--KVPTCVKFHPDNQNIFLVGGSDKK 323 (503)
T ss_pred hhhcchhhhhhhhcccc-CCeeeeeecceeeeeeccccceEEEEEecC--CCceeeecCCCCCcEEEEecCCCc
Confidence 36668889999999987 888888888999999999999999888877 555555555555 55666666654
No 45
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=88.15 E-value=0.98 Score=33.34 Aligned_cols=41 Identities=12% Similarity=0.012 Sum_probs=32.4
Q ss_pred ccchhhhhCCCCCCeEEEE-eecceEEEEeCCCCceeeEEeec
Q psy8836 10 GAVEAIAEQPGSPNHIIVG-YSKGLVVLWDRTTNTANQISTMN 51 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIg-g~~G~VVl~d~~~~~~~~~~~v~ 51 (118)
+.+..++++|. ...|+++ +.+|.|.+||..+.+.+..+.+.
T Consensus 249 ~~~~~~~~~~~-g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~ 290 (300)
T TIGR03866 249 QRVWQLAFTPD-EKYLLTTNGVSNDVSVIDVAALKVIKSIKVG 290 (300)
T ss_pred CCcceEEECCC-CCEEEEEcCCCCeEEEEECCCCcEEEEEEcc
Confidence 35778899996 6677776 56899999999999987766554
No 46
>KOG0273|consensus
Probab=88.09 E-value=0.76 Score=39.49 Aligned_cols=67 Identities=19% Similarity=0.319 Sum_probs=52.8
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeecccccc-ccccccCCcccccccCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDR-DSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~-es~~W~~~~~~~~~~~~d~ 75 (118)
|-.|-++|-.|-|+=. -..|+-||..|.+||||-.++++-+.++.- +.- -.++|.....+ .++..|+
T Consensus 272 l~~HkgPI~slKWnk~-G~yilS~~vD~ttilwd~~~g~~~q~f~~~--s~~~lDVdW~~~~~F-~ts~td~ 339 (524)
T KOG0273|consen 272 LGQHKGPIFSLKWNKK-GTYILSGGVDGTTILWDAHTGTVKQQFEFH--SAPALDVDWQSNDEF-ATSSTDG 339 (524)
T ss_pred hhccCCceEEEEEcCC-CCEEEeccCCccEEEEeccCceEEEeeeec--cCCccceEEecCceE-eecCCCc
Confidence 4457899999999976 889999999999999999999888776654 333 45789988776 4555464
No 47
>KOG0322|consensus
Probab=88.02 E-value=0.47 Score=38.32 Aligned_cols=19 Identities=42% Similarity=0.945 Sum_probs=16.7
Q ss_pred eEEEEeecceEEEEeCCCC
Q psy8836 24 HIIVGYSKGLVVLWDRTTN 42 (118)
Q Consensus 24 ~LlIgg~~G~VVl~d~~~~ 42 (118)
-|+.||++|+|++||.+++
T Consensus 167 lllaGyEsghvv~wd~S~~ 185 (323)
T KOG0322|consen 167 LLLAGYESGHVVIWDLSTG 185 (323)
T ss_pred EEEEeccCCeEEEEEccCC
Confidence 4678999999999999886
No 48
>KOG0266|consensus
Probab=87.35 E-value=1.1 Score=37.33 Aligned_cols=67 Identities=24% Similarity=0.311 Sum_probs=50.0
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccc-cccccccCCcccccccCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSD-RDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~-~es~~W~~~~~~~~~~~~d~ 75 (118)
+.|+-.|..+..+|. .+.++-|+..|.|.+||..+.+.+..+... ++ +.++.-..++....+...|+
T Consensus 243 ~gH~~~v~~~~f~p~-g~~i~Sgs~D~tvriWd~~~~~~~~~l~~h--s~~is~~~f~~d~~~l~s~s~d~ 310 (456)
T KOG0266|consen 243 KGHSTYVTSVAFSPD-GNLLVSGSDDGTVRIWDVRTGECVRKLKGH--SDGISGLAFSPDGNLLVSASYDG 310 (456)
T ss_pred cCCCCceEEEEecCC-CCEEEEecCCCcEEEEeccCCeEEEeeecc--CCceEEEEECCCCCEEEEcCCCc
Confidence 457889999999998 699999999999999999997777665544 33 33444566666666665454
No 49
>KOG0284|consensus
Probab=87.07 E-value=0.33 Score=41.00 Aligned_cols=92 Identities=16% Similarity=0.320 Sum_probs=61.5
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEE-eeccccccccccccCCcccccccCCCCCCCCCcccccee-
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIS-TMNIVSDRDSFVWKGHARLSVKHTGDSKDKEPSKALLKS- 87 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~-~v~l~~~~es~~W~~~~~~~~~~~~d~~~~~p~k~~~~~- 87 (118)
..|-.+.|-|+ -|.|++|..+|-+.||+..+=...... .=+ +.+....|-+.+..-++...+| .++
T Consensus 97 c~V~~v~WtPe-GRRLltgs~SGEFtLWNg~~fnFEtilQaHD--s~Vr~m~ws~~g~wmiSgD~gG---------~iKy 164 (464)
T KOG0284|consen 97 CPVNVVRWTPE-GRRLLTGSQSGEFTLWNGTSFNFETILQAHD--SPVRTMKWSHNGTWMISGDKGG---------MIKY 164 (464)
T ss_pred cceeeEEEcCC-CceeEeecccccEEEecCceeeHHHHhhhhc--ccceeEEEccCCCEEEEcCCCc---------eEEe
Confidence 35677889998 999999999999999976221110000 112 4456778999999988887554 332
Q ss_pred eCCCCCCeeeeeecCChheeeeeecc
Q psy8836 88 VSPGFQPTCLVQLHPPAAVTSLVLHT 113 (118)
Q Consensus 88 ~p~G~Q~~~v~q~~Pp~~ITala~~s 113 (118)
|-+-+|--+.+|-.--++|+.||.++
T Consensus 165 WqpnmnnVk~~~ahh~eaIRdlafSp 190 (464)
T KOG0284|consen 165 WQPNMNNVKIIQAHHAEAIRDLAFSP 190 (464)
T ss_pred cccchhhhHHhhHhhhhhhheeccCC
Confidence 33444444455556678999999875
No 50
>KOG0321|consensus
Probab=86.11 E-value=0.61 Score=41.36 Aligned_cols=39 Identities=26% Similarity=0.399 Sum_probs=34.6
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCc
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNT 43 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~ 43 (118)
|..|-|+|..+++.|.|+.-+|-||..|.|.|||..-+.
T Consensus 140 ~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~ 178 (720)
T KOG0321|consen 140 NLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNG 178 (720)
T ss_pred ecccccccchhhhccCCCcceeeccCCCcEEEEEEeccc
Confidence 556788999999999999999999999999999875444
No 51
>KOG0270|consensus
Probab=85.49 E-value=1 Score=38.37 Aligned_cols=64 Identities=19% Similarity=0.218 Sum_probs=49.4
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEe-eccccccccccccCCcccccccCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIST-MNIVSDRDSFVWKGHARLSVKHTG 73 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~-v~l~~~~es~~W~~~~~~~~~~~~ 73 (118)
|--||..++||=...+.|.=|+..-.|+|||..+.+....+. -. ..+.++.||...+...-+++
T Consensus 242 HTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~--k~Vq~l~wh~~~p~~LLsGs 306 (463)
T KOG0270|consen 242 HTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHG--KKVQTLEWHPYEPSVLLSGS 306 (463)
T ss_pred chHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcC--CceeEEEecCCCceEEEecc
Confidence 556999999999877777788888999999998887765444 22 45667889988877765554
No 52
>KOG0293|consensus
Probab=85.05 E-value=0.61 Score=39.74 Aligned_cols=66 Identities=17% Similarity=0.185 Sum_probs=52.2
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d 74 (118)
|-.+|-.|.|.|. .|+|+--|.+--+.+||-.+++-...+.-.+-....|.+|-.++.-+++.+.|
T Consensus 268 h~~~V~yi~wSPD-dryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~d 333 (519)
T KOG0293|consen 268 HSQPVSYIMWSPD-DRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPD 333 (519)
T ss_pred ccCceEEEEECCC-CCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCC
Confidence 5568999999996 99999999999999999999888755554422335677898888888777655
No 53
>KOG0269|consensus
Probab=84.74 E-value=0.84 Score=41.23 Aligned_cols=67 Identities=16% Similarity=0.248 Sum_probs=49.9
Q ss_pred CCCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccc-cccccc-cCCcccccccC
Q psy8836 4 HYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSD-RDSFVW-KGHARLSVKHT 72 (118)
Q Consensus 4 ~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~-~es~~W-~~~~~~~~~~~ 72 (118)
.|+.|-++|..+.+++..++.|+-|+..|.|-+||++.+.-...+..+ .+ +..+.| .+.+-.|.+.+
T Consensus 128 ~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~n--SESiRDV~fsp~~~~~F~s~~ 196 (839)
T KOG0269|consen 128 VFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSN--SESIRDVKFSPGYGNKFASIH 196 (839)
T ss_pred HhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccccccccccc--chhhhceeeccCCCceEEEec
Confidence 466788999999999999999999999999999999888776665554 22 344455 34444444444
No 54
>KOG0267|consensus
Probab=84.63 E-value=0.34 Score=43.44 Aligned_cols=69 Identities=12% Similarity=0.182 Sum_probs=54.0
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
|..|-..|+.|-+++. .+.|.-|-.+|.|-+||+....++..+..- ....-++.||-.+.++++...|+
T Consensus 66 ~~~hespIeSl~f~~~-E~LlaagsasgtiK~wDleeAk~vrtLtgh-~~~~~sv~f~P~~~~~a~gStdt 134 (825)
T KOG0267|consen 66 LTGHESPIESLTFDTS-ERLLAAGSASGTIKVWDLEEAKIVRTLTGH-LLNITSVDFHPYGEFFASGSTDT 134 (825)
T ss_pred eeccCCcceeeecCcc-hhhhcccccCCceeeeehhhhhhhhhhhcc-ccCcceeeeccceEEeccccccc
Confidence 4567789999999997 888888888899999999988887543322 24566788999999997777664
No 55
>KOG1523|consensus
Probab=84.58 E-value=0.94 Score=37.33 Aligned_cols=66 Identities=20% Similarity=0.192 Sum_probs=48.6
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCcee---eEEeeccccccccccccCCcccccccCCCCC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTAN---QISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~---~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
+|+.-+.|.|. ++|+.||+.+-.|-+|-+..+..= .++-..|-..+.++.||-.+-+..-.++|++
T Consensus 101 rAAt~V~WsP~-enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k 169 (361)
T KOG1523|consen 101 RAATCVKWSPK-ENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGK 169 (361)
T ss_pred cceeeEeecCc-CceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcc
Confidence 68999999998 999999999999999955444321 2222333366788999988877766666654
No 56
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=84.56 E-value=2.7 Score=30.95 Aligned_cols=58 Identities=14% Similarity=0.178 Sum_probs=39.5
Q ss_pred cchhhhhCCCCCCeEEEEe-ecceEEEEeCCCCceeeEEeeccccccccccccCCccccccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGY-SKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKH 71 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg-~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~ 71 (118)
.+..+.++|. .++|++++ ..|.|.+||..+.+.+..+... ...+++.|...++.....
T Consensus 74 ~~~~~~~~~~-g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~dg~~l~~~ 132 (300)
T TIGR03866 74 DPELFALHPN-GKILYIANEDDNLVTVIDIETRKVLAEIPVG--VEPEGMAVSPDGKIVVNT 132 (300)
T ss_pred CccEEEECCC-CCEEEEEcCCCCeEEEEECCCCeEEeEeeCC--CCcceEEECCCCCEEEEE
Confidence 3456778886 77787765 4689999999887766555433 345667777777665433
No 57
>KOG0271|consensus
Probab=84.36 E-value=1.5 Score=37.13 Aligned_cols=67 Identities=15% Similarity=0.203 Sum_probs=47.4
Q ss_pred CCCCcccchhhhhCCC----CCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccC
Q psy8836 5 YKLNPGAVEAIAEQPG----SPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~----ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~ 72 (118)
++.|---|..|+|.|- ..|+|.-++-.|.|.|||......+ +...-=.....++.|-|++=.-..+.
T Consensus 196 l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~-~~lsgHT~~VTCvrwGG~gliySgS~ 266 (480)
T KOG0271|consen 196 LRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCV-RTLSGHTASVTCVRWGGEGLIYSGSQ 266 (480)
T ss_pred ccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEE-EEeccCccceEEEEEcCCceEEecCC
Confidence 4445557888888752 2788888999999999999887665 23333335677888998886654444
No 58
>KOG0264|consensus
Probab=84.36 E-value=3.4 Score=35.02 Aligned_cols=110 Identities=12% Similarity=0.150 Sum_probs=68.1
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCC--CceeeEEee-ccccccccccccCCcccc-cccCCCCCC---
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTT--NTANQISTM-NIVSDRDSFVWKGHARLS-VKHTGDSKD--- 77 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~--~~~~~~~~v-~l~~~~es~~W~~~~~~~-~~~~~d~~~--- 77 (118)
|+.|--+|+-.+|||.+...+.-.|..|.+.|||..+ .+.-..... . .++.++.|..+...- .+.++|++.
T Consensus 223 ~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~--~~vn~~~fnp~~~~ilAT~S~D~tV~Lw 300 (422)
T KOG0264|consen 223 FSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHS--AEVNCVAFNPFNEFILATGSADKTVALW 300 (422)
T ss_pred eecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccC--CceeEEEeCCCCCceEEeccCCCcEEEe
Confidence 5556679999999999999999999999999999984 333222111 2 556777876665444 344446432
Q ss_pred --CCCccccceeeCCCCCCeeeeeecCChheeeeeecccccCC
Q psy8836 78 --KEPSKALLKSVSPGFQPTCLVQLHPPAAVTSLVLHTEWGEY 118 (118)
Q Consensus 78 --~~p~k~~~~~~p~G~Q~~~v~q~~Pp~~ITala~~s~~gL~ 118 (118)
+.-+++ +-.-.|...+.+.--.-|--=|-||.+.+.|.+
T Consensus 301 DlRnL~~~--lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl 341 (422)
T KOG0264|consen 301 DLRNLNKP--LHTFEGHEDEVFQVEWSPHNETVLASSGTDRRL 341 (422)
T ss_pred echhcccC--ceeccCCCcceEEEEeCCCCCceeEecccCCcE
Confidence 222222 222234444333222356667788888777653
No 59
>KOG1034|consensus
Probab=84.18 E-value=2.8 Score=34.79 Aligned_cols=72 Identities=15% Similarity=0.226 Sum_probs=53.2
Q ss_pred CCCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccc---cccccccccCCcccccccCCCCC
Q psy8836 4 HYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIV---SDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 4 ~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~---~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
.|+.|=++|..|-.||.+++.|+-|...--|-||+..+..-+-++- .+- ..+-|+.|+..+...++++-|-+
T Consensus 130 ~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfG-G~egHrdeVLSvD~~~~gd~i~ScGmDhs 204 (385)
T KOG1034|consen 130 NYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFG-GVEGHRDEVLSVDFSLDGDRIASCGMDHS 204 (385)
T ss_pred ceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEec-ccccccCcEEEEEEcCCCCeeeccCCcce
Confidence 4677888999999999988888888888999999988775443221 100 23346779988888888887743
No 60
>KOG0645|consensus
Probab=83.97 E-value=1.8 Score=35.05 Aligned_cols=65 Identities=12% Similarity=0.231 Sum_probs=46.8
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCcee--eEEeeccccccccccccCCcccccccCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTAN--QISTMNIVSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~--~~~~v~l~~~~es~~W~~~~~~~~~~~~d 74 (118)
|-++|..|+|.|. -+.|+.|.=.+.++||.-...+.. ..++.. -.+..++.|..+|.+-.+++.|
T Consensus 60 hkrsVRsvAwsp~-g~~La~aSFD~t~~Iw~k~~~efecv~~lEGH-EnEVK~Vaws~sG~~LATCSRD 126 (312)
T KOG0645|consen 60 HKRSVRSVAWSPH-GRYLASASFDATVVIWKKEDGEFECVATLEGH-ENEVKCVAWSASGNYLATCSRD 126 (312)
T ss_pred chheeeeeeecCC-CcEEEEeeccceEEEeecCCCceeEEeeeecc-ccceeEEEEcCCCCEEEEeeCC
Confidence 6689999999998 899999999999999954444332 222221 0446688899888887655533
No 61
>KOG0285|consensus
Probab=83.84 E-value=3.2 Score=34.94 Aligned_cols=70 Identities=16% Similarity=0.252 Sum_probs=49.5
Q ss_pred CCCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 4 HYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 4 ~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
+|-.|.-+|..++.+|. -+.|+-||....+-+||..++..+..+... ..+..++.-+...++.++++-|+
T Consensus 230 ~YhGHlS~V~~L~lhPT-ldvl~t~grDst~RvWDiRtr~~V~~l~GH-~~~V~~V~~~~~dpqvit~S~D~ 299 (460)
T KOG0285|consen 230 HYHGHLSGVYCLDLHPT-LDVLVTGGRDSTIRVWDIRTRASVHVLSGH-TNPVASVMCQPTDPQVITGSHDS 299 (460)
T ss_pred HhccccceeEEEecccc-ceeEEecCCcceEEEeeecccceEEEecCC-CCcceeEEeecCCCceEEecCCc
Confidence 46678889999999998 899999999999999999999877554311 13344444444444555444454
No 62
>KOG0772|consensus
Probab=83.71 E-value=3.7 Score=36.00 Aligned_cols=99 Identities=14% Similarity=0.208 Sum_probs=60.6
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCC----ceeeEEeeccc-cccccccccCCcccccccCCCCCCCCCcc
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTN----TANQISTMNIV-SDRDSFVWKGHARLSVKHTGDSKDKEPSK 82 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~----~~~~~~~v~l~-~~~es~~W~~~~~~~~~~~~d~~~~~p~k 82 (118)
|--.+.--.|||.+.+.++-.+..|.+-|||.... +++..-..+.. -...+..|..++++....-.||+..
T Consensus 267 Hia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ---- 342 (641)
T KOG0772|consen 267 HIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQ---- 342 (641)
T ss_pred ceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCcee----
Confidence 44566777899999999999999999999965322 33222111100 2234667999999965555456543
Q ss_pred ccceeeCCCC---CCeee-eeec-CChheeeeeeccc
Q psy8836 83 ALLKSVSPGF---QPTCL-VQLH-PPAAVTSLVLHTE 114 (118)
Q Consensus 83 ~~~~~~p~G~---Q~~~v-~q~~-Pp~~ITala~~s~ 114 (118)
.|--|- .|... -+-+ |=+-|||++.+..
T Consensus 343 ----~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~d 375 (641)
T KOG0772|consen 343 ----IWDKGSRTVRPVMKVKDAHLPGQDITSISFSYD 375 (641)
T ss_pred ----eeecCCcccccceEeeeccCCCCceeEEEeccc
Confidence 333222 22221 2222 5568999998753
No 63
>KOG1332|consensus
Probab=83.64 E-value=1.2 Score=35.80 Aligned_cols=73 Identities=15% Similarity=0.107 Sum_probs=48.0
Q ss_pred CCCcccchhhhh-CCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccc-ccccccc--ccCCcccccccCCCCCCC
Q psy8836 6 KLNPGAVEAIAE-QPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIV-SDRDSFV--WKGHARLSVKHTGDSKDK 78 (118)
Q Consensus 6 ~~~p~aV~~I~~-cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~-~~~es~~--W~~~~~~~~~~~~d~~~~ 78 (118)
+.|-|+|-+++| ||..-+.|.=.+-.|+||||.+.+.+-.+..+-..- ....++. ||+.|-+..|..+||+.+
T Consensus 53 ~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vs 129 (299)
T KOG1332|consen 53 TGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVS 129 (299)
T ss_pred cCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEE
Confidence 446677766665 799778888888899999998877643321111100 2233444 577788888888888653
No 64
>KOG2048|consensus
Probab=83.07 E-value=1.3 Score=39.43 Aligned_cols=63 Identities=17% Similarity=0.272 Sum_probs=48.8
Q ss_pred cccchhhhhCCCCCCeEEEEeecceEEEEeCCCCcee-eEEeeccccccccccccCCcccccccC
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTAN-QISTMNIVSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~-~~~~v~l~~~~es~~W~~~~~~~~~~~ 72 (118)
|.+|.+++..=. |++|.|+=+.|.|=+|+....=-. ..+...--..+|+++|-..++||+...
T Consensus 25 Ps~I~slA~s~k-S~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~ 88 (691)
T KOG2048|consen 25 PSEIVSLAYSHK-SNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSGL 88 (691)
T ss_pred ccceEEEEEecc-CCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeecC
Confidence 889999999976 999999999999999998776222 223333115579999998899986555
No 65
>KOG0264|consensus
Probab=82.81 E-value=1.6 Score=36.85 Aligned_cols=68 Identities=16% Similarity=0.223 Sum_probs=44.5
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCcee-eEEeeccccccccccccCC-cccccccCCCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTAN-QISTMNIVSDRDSFVWKGH-ARLSVKHTGDSK 76 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~-~~~~v~l~~~~es~~W~~~-~~~~~~~~~d~~ 76 (118)
|.+.|-.++++|-+...|.-|+..+.|-|||+++-..- ..++.- -.++-.+.|.-| .....+++.|++
T Consensus 271 h~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H-~dev~~V~WSPh~etvLASSg~D~r 340 (422)
T KOG0264|consen 271 HSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGH-EDEVFQVEWSPHNETVLASSGTDRR 340 (422)
T ss_pred cCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCC-CcceEEEEeCCCCCceeEecccCCc
Confidence 67789999999998888889999999999988654332 122111 123445567443 333455555654
No 66
>KOG0272|consensus
Probab=82.66 E-value=0.93 Score=38.44 Aligned_cols=69 Identities=14% Similarity=0.148 Sum_probs=49.2
Q ss_pred CCCCcccchhhhhCCCC-CCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCC
Q psy8836 5 YKLNPGAVEAIAEQPGS-PNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~d-s~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d 74 (118)
++.|-..|..+.++|-+ ...|.-|...|.|-||+..+.+.++.++-.+ ..+-.+.||.+|++-.+..-|
T Consensus 213 l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~-~RVs~VafHPsG~~L~TasfD 282 (459)
T KOG0272|consen 213 LRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHL-ARVSRVAFHPSGKFLGTASFD 282 (459)
T ss_pred EeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcch-hhheeeeecCCCceeeecccc
Confidence 45677889999999995 5588888999999999998876664444332 233456788888776444333
No 67
>KOG1538|consensus
Probab=81.85 E-value=1.6 Score=39.57 Aligned_cols=99 Identities=13% Similarity=0.115 Sum_probs=67.0
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccc-cccccccCCcccccccCCCCC--CCCCcccccee
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSD-RDSFVWKGHARLSVKHTGDSK--DKEPSKALLKS 87 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~-~es~~W~~~~~~~~~~~~d~~--~~~p~k~~~~~ 87 (118)
.|-.|+.-|. -.+|++|-.+ -+.+||...+...+.+-.. .| ...+.|.++|+.|.+.++|-. .=.+..-+-++
T Consensus 14 ci~d~afkPD-GsqL~lAAg~-rlliyD~ndG~llqtLKgH--KDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~Lk 89 (1081)
T KOG1538|consen 14 CINDIAFKPD-GTQLILAAGS-RLLVYDTSDGTLLQPLKGH--KDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILK 89 (1081)
T ss_pred chheeEECCC-CceEEEecCC-EEEEEeCCCcccccccccc--cceEEEEEEccCCceeccCCCceeEEEecccccceee
Confidence 7888999997 6666655433 4678988777666554433 33 357789999999999887721 12233334566
Q ss_pred eCCCCCCeeeeeec---CChheeeeeecccccC
Q psy8836 88 VSPGFQPTCLVQLH---PPAAVTSLVLHTEWGE 117 (118)
Q Consensus 88 ~p~G~Q~~~v~q~~---Pp~~ITala~~s~~gL 117 (118)
++|| -+|||+ |..++-+-+--|.+||
T Consensus 90 YSH~----D~IQCMsFNP~~h~LasCsLsdFgl 118 (1081)
T KOG1538|consen 90 YSHN----DAIQCMSFNPITHQLASCSLSDFGL 118 (1081)
T ss_pred eccC----CeeeEeecCchHHHhhhcchhhccc
Confidence 6665 578997 8888777777777776
No 68
>KOG0282|consensus
Probab=81.76 E-value=1.3 Score=38.02 Aligned_cols=71 Identities=15% Similarity=0.127 Sum_probs=50.7
Q ss_pred CCCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCC-CceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 4 HYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTT-NTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 4 ~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~-~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
.|+.|+-.|.+|.|.|..--.||=||..|.|-||+.-. .+.++.|..- -..+..+.|...|..|.+.+-|.
T Consensus 209 ~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH-~k~Vrd~~~s~~g~~fLS~sfD~ 280 (503)
T KOG0282|consen 209 NLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGH-RKPVRDASFNNCGTSFLSASFDR 280 (503)
T ss_pred eccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcc-hhhhhhhhccccCCeeeeeecce
Confidence 36778999999999998344455678889999998755 4444333211 15566778988888888777773
No 69
>KOG1445|consensus
Probab=81.67 E-value=2.5 Score=38.14 Aligned_cols=61 Identities=20% Similarity=0.281 Sum_probs=47.1
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeec-cccccccccccCCcccccccCCC
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMN-IVSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~-l~~~~es~~W~~~~~~~~~~~~d 74 (118)
.|+-+..||. +.-|+..+..|.|-|||.++.+.+. +.+ -.+-+.|..|..+|++...+..|
T Consensus 130 ~vE~l~fHpT-aDgil~s~a~g~v~i~D~stqk~~~--el~~h~d~vQSa~WseDG~llatscKd 191 (1012)
T KOG1445|consen 130 IVECLRFHPT-ADGILASGAHGSVYITDISTQKTAV--ELSGHTDKVQSADWSEDGKLLATSCKD 191 (1012)
T ss_pred EEEEeecccC-cCceEEeccCceEEEEEcccCceee--cccCCchhhhccccccCCceEeeecCC
Confidence 6888999998 9999999999999999999887652 222 11335677899999998766534
No 70
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=80.85 E-value=2.5 Score=24.77 Aligned_cols=32 Identities=22% Similarity=0.255 Sum_probs=27.4
Q ss_pred ccchhhhhCCCCC--CeEEEEeecceEEEEeCCC
Q psy8836 10 GAVEAIAEQPGSP--NHIIVGYSKGLVVLWDRTT 41 (118)
Q Consensus 10 ~aV~~I~~cP~ds--~~LlIgg~~G~VVl~d~~~ 41 (118)
|||..+..+|++. ..|+++--.|.|=|+|..+
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 6888999999845 5888899999999999875
No 71
>KOG0772|consensus
Probab=80.76 E-value=4.5 Score=35.49 Aligned_cols=67 Identities=12% Similarity=0.112 Sum_probs=51.4
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeec-----cc------cccccccccCCcc-cccccCCCCCC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMN-----IV------SDRDSFVWKGHAR-LSVKHTGDSKD 77 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~-----l~------~~~es~~W~~~~~-~~~~~~~d~~~ 77 (118)
.+|..+++.|. .++|||.+.+.|..|+|....++++..-.+ +- ..+.+-+||...+ .|++++.|++.
T Consensus 215 h~i~sl~ys~T-g~~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~Dgtl 293 (641)
T KOG0772|consen 215 HQINSLQYSVT-GDQILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTL 293 (641)
T ss_pred cccceeeecCC-CCeEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcE
Confidence 58999999997 999999999999999998777776544333 11 4566788987765 45677777765
No 72
>KOG0647|consensus
Probab=80.47 E-value=1.4 Score=36.09 Aligned_cols=66 Identities=15% Similarity=0.232 Sum_probs=45.1
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCC-ceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTN-TANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~-~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
.|..|++.|..-+.|+-|.=.|.|-+|+.... ..+.....++...+-+++|..+|...-..++|+.
T Consensus 29 sIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~ 95 (347)
T KOG0647|consen 29 SISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQ 95 (347)
T ss_pred chheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCc
Confidence 99999999974444445556799999987653 3333333343366667889999976666666643
No 73
>KOG1272|consensus
Probab=80.27 E-value=1.1 Score=38.52 Aligned_cols=68 Identities=21% Similarity=0.282 Sum_probs=51.2
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCcee-eEEeeccccccccccccCCcccccccCCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTAN-QISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~-~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
++.-|.+..+..||. ...+.+|.+.|.|.+|.-.+++.+ +.+.-. ....+++-+..|....+++.|-+
T Consensus 248 ~t~~G~~~vm~qNP~-NaVih~GhsnGtVSlWSP~skePLvKiLcH~--g~V~siAv~~~G~YMaTtG~Dr~ 316 (545)
T KOG1272|consen 248 RTGAGRTDVMKQNPY-NAVIHLGHSNGTVSLWSPNSKEPLVKILCHR--GPVSSIAVDRGGRYMATTGLDRK 316 (545)
T ss_pred HccCCccchhhcCCc-cceEEEcCCCceEEecCCCCcchHHHHHhcC--CCcceEEECCCCcEEeecccccc
Confidence 445678999999998 999999999999999988777764 111122 44566777788888877776643
No 74
>KOG0305|consensus
Probab=80.26 E-value=1.4 Score=37.88 Aligned_cols=35 Identities=29% Similarity=0.521 Sum_probs=29.4
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCcee
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTAN 45 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~ 45 (118)
+.|..+.|+++ -+.|.||...|.|-|||..+..-+
T Consensus 218 ~~vtSv~ws~~-G~~LavG~~~g~v~iwD~~~~k~~ 252 (484)
T KOG0305|consen 218 ELVTSVKWSPD-GSHLAVGTSDGTVQIWDVKEQKKT 252 (484)
T ss_pred CceEEEEECCC-CCEEEEeecCCeEEEEehhhcccc
Confidence 47889999998 999999999999999986554443
No 75
>KOG0303|consensus
Probab=80.25 E-value=9.1 Score=32.59 Aligned_cols=105 Identities=18% Similarity=0.173 Sum_probs=65.3
Q ss_pred CCCCCC---CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCC-------ceeeEEeeccccc-cccccccCCccccc-
Q psy8836 2 PDHYKL---NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTN-------TANQISTMNIVSD-RDSFVWKGHARLSV- 69 (118)
Q Consensus 2 ~~~y~~---~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~-------~~~~~~~v~l~~~-~es~~W~~~~~~~~- 69 (118)
+++|-. |-++|--|.|||.|..-+.-|++.-.|-||+...+ +.+..+... +. .--+.||-......
T Consensus 71 d~~~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH--~rrVg~V~wHPtA~NVLl 148 (472)
T KOG0303|consen 71 DASYPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGH--QRRVGLVQWHPTAPNVLL 148 (472)
T ss_pred CCCCCCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeec--ceeEEEEeecccchhhHh
Confidence 444443 88899999999999999999999999999954222 222122222 22 22446998877664
Q ss_pred ccCCCCCCCCCccccceeeCCCCCCeeeeeecCChheeeeeecccccC
Q psy8836 70 KHTGDSKDKEPSKALLKSVSPGFQPTCLVQLHPPAAVTSLVLHTEWGE 117 (118)
Q Consensus 70 ~~~~d~~~~~p~k~~~~~~p~G~Q~~~v~q~~Pp~~ITala~~s~~gL 117 (118)
+.++| .....|--|-- +.++-+--|..|.++..|..=++
T Consensus 149 sag~D--------n~v~iWnv~tg-eali~l~hpd~i~S~sfn~dGs~ 187 (472)
T KOG0303|consen 149 SAGSD--------NTVSIWNVGTG-EALITLDHPDMVYSMSFNRDGSL 187 (472)
T ss_pred hccCC--------ceEEEEeccCC-ceeeecCCCCeEEEEEeccCCce
Confidence 33333 11334444422 23344558899999998876444
No 76
>KOG1445|consensus
Probab=79.87 E-value=1.6 Score=39.35 Aligned_cols=30 Identities=20% Similarity=0.330 Sum_probs=27.7
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDR 39 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~ 39 (118)
-.|.-++|+|=|.-+|.||+..|+|-||..
T Consensus 628 t~vtDl~WdPFD~~rLAVa~ddg~i~lWr~ 657 (1012)
T KOG1445|consen 628 TLVTDLHWDPFDDERLAVATDDGQINLWRL 657 (1012)
T ss_pred ceeeecccCCCChHHeeecccCceEEEEEe
Confidence 378999999999999999999999999954
No 77
>KOG2055|consensus
Probab=79.86 E-value=2.6 Score=36.21 Aligned_cols=61 Identities=11% Similarity=0.161 Sum_probs=43.1
Q ss_pred cccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeecccccc--ccccccCCcccccccC
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDR--DSFVWKGHARLSVKHT 72 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~--es~~W~~~~~~~~~~~ 72 (118)
+|.|..+.+. .|+.+|++-|.-|+|.+||+.+..++.+|.-+ -.+ ++++-..++.++.+.+
T Consensus 344 eG~v~~~~fs-Sdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~--G~v~gts~~~S~ng~ylA~GS 406 (514)
T KOG2055|consen 344 EGVVSDFTFS-SDSKELLASGGTGEVYVWNLRQNSCLHRFVDD--GSVHGTSLCISLNGSYLATGS 406 (514)
T ss_pred ccEEeeEEEe-cCCcEEEEEcCCceEEEEecCCcceEEEEeec--CccceeeeeecCCCceEEecc
Confidence 4667777787 67999999999999999999999888776644 333 2333334555554433
No 78
>KOG2066|consensus
Probab=79.40 E-value=1.3 Score=40.22 Aligned_cols=53 Identities=23% Similarity=0.418 Sum_probs=35.2
Q ss_pred ccchhhhhCCC----CCCeEEEEeecceEEEEeC---CCCceeeEEeeccccccccccccCCc
Q psy8836 10 GAVEAIAEQPG----SPNHIIVGYSKGLVVLWDR---TTNTANQISTMNIVSDRDSFVWKGHA 65 (118)
Q Consensus 10 ~aV~~I~~cP~----ds~~LlIgg~~G~VVl~d~---~~~~~~~~~~v~l~~~~es~~W~~~~ 65 (118)
+++..|+.+|. .|+++++||.+| +||+.- ..+..+..-... -.+.|+.|+|+-
T Consensus 113 rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~e--G~I~~i~W~g~l 172 (846)
T KOG2066|consen 113 RPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGE--GPIHSIKWRGNL 172 (846)
T ss_pred CcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCc--cceEEEEecCcE
Confidence 48999999996 589999999999 899832 222222121222 345666777654
No 79
>KOG0286|consensus
Probab=79.17 E-value=2.9 Score=34.23 Aligned_cols=45 Identities=16% Similarity=0.259 Sum_probs=35.3
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeec
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMN 51 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~ 51 (118)
|.|.+.|-.+-|+++ ++.|+-|...|-++|||.-|+.-++.+..+
T Consensus 52 kGH~~Ki~~~~ws~D-sr~ivSaSqDGklIvWDs~TtnK~haipl~ 96 (343)
T KOG0286|consen 52 KGHLNKIYAMDWSTD-SRRIVSASQDGKLIVWDSFTTNKVHAIPLP 96 (343)
T ss_pred cccccceeeeEecCC-cCeEEeeccCCeEEEEEcccccceeEEecC
Confidence 457788999999996 999999999999999987555444444433
No 80
>KOG0649|consensus
Probab=77.82 E-value=2.4 Score=34.13 Aligned_cols=46 Identities=20% Similarity=0.363 Sum_probs=33.7
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeec
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMN 51 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~ 51 (118)
||.|--=|..+..--. +++++-|++.|.|-|||.++.+-+++++.-
T Consensus 152 ~rGHtDYvH~vv~R~~-~~qilsG~EDGtvRvWd~kt~k~v~~ie~y 197 (325)
T KOG0649|consen 152 YRGHTDYVHSVVGRNA-NGQILSGAEDGTVRVWDTKTQKHVSMIEPY 197 (325)
T ss_pred EcCCcceeeeeeeccc-CcceeecCCCccEEEEeccccceeEEeccc
Confidence 4444444444444333 788999999999999999999888776644
No 81
>KOG0289|consensus
Probab=77.73 E-value=3.6 Score=35.25 Aligned_cols=68 Identities=15% Similarity=0.173 Sum_probs=49.1
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTG 73 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~ 73 (118)
|-.|-++|..|++. +|-=.|.++...|-|.+||+..-+..+.+..+=.+...++.....|++-...++
T Consensus 385 Fpght~~vk~i~Fs-ENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~ 452 (506)
T KOG0289|consen 385 FPGHTGPVKAISFS-ENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGS 452 (506)
T ss_pred CCCCCCceeEEEec-cCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecc
Confidence 34467899999998 435567777788889999999888887777663234667777777776655543
No 82
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=76.20 E-value=2.3 Score=37.16 Aligned_cols=34 Identities=21% Similarity=0.201 Sum_probs=29.2
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTN 42 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~ 42 (118)
.+.....|+|||. ...++||+.+|.+-+||..-.
T Consensus 298 a~~~P~~iaWHp~-gai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 298 AEFIPTLIAWHPD-GAIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred ecccceEEEEcCC-CcEEEEEcCCceEEEEEeecC
Confidence 3467889999997 999999999999999986444
No 83
>KOG0294|consensus
Probab=75.97 E-value=3.5 Score=34.07 Aligned_cols=62 Identities=13% Similarity=0.268 Sum_probs=47.9
Q ss_pred CCCCCcccchhhhhCCCCCCeEEE-EeecceEEEEeCCCCceeeEEeeccccccccccccCCccccc
Q psy8836 4 HYKLNPGAVEAIAEQPGSPNHIIV-GYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSV 69 (118)
Q Consensus 4 ~y~~~p~aV~~I~~cP~ds~~LlI-gg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~ 69 (118)
..|.|-++|..|+-||. +||.+ -|..+.+-+||+.+.+... ..+|-+.-+.+.|...|..|+
T Consensus 122 slK~H~~~Vt~lsiHPS--~KLALsVg~D~~lr~WNLV~Gr~a~--v~~L~~~at~v~w~~~Gd~F~ 184 (362)
T KOG0294|consen 122 SLKAHKGQVTDLSIHPS--GKLALSVGGDQVLRTWNLVRGRVAF--VLNLKNKATLVSWSPQGDHFV 184 (362)
T ss_pred eecccccccceeEecCC--CceEEEEcCCceeeeehhhcCccce--eeccCCcceeeEEcCCCCEEE
Confidence 35678899999999995 56654 4677889999999998864 444447778889988888664
No 84
>KOG0299|consensus
Probab=75.95 E-value=6.5 Score=33.74 Aligned_cols=99 Identities=17% Similarity=0.151 Sum_probs=57.7
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeecccc-ccccccccCCcccccccCCCCCCC---CC-cc
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVS-DRDSFVWKGHARLSVKHTGDSKDK---EP-SK 82 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~-~~es~~W~~~~~~~~~~~~d~~~~---~p-~k 82 (118)
|+..|..|.---. .+-++|||....+-||+.....-+ ++... + -+++++-= ....|++.+.+|+.. .- .|
T Consensus 285 Hqd~v~~IdaL~r-eR~vtVGgrDrT~rlwKi~eesql-ifrg~--~~sidcv~~I-n~~HfvsGSdnG~IaLWs~~KKk 359 (479)
T KOG0299|consen 285 HQDGVLGIDALSR-ERCVTVGGRDRTVRLWKIPEESQL-IFRGG--EGSIDCVAFI-NDEHFVSGSDNGSIALWSLLKKK 359 (479)
T ss_pred Cccceeeechhcc-cceEEeccccceeEEEecccccee-eeeCC--CCCeeeEEEe-cccceeeccCCceEEEeeecccC
Confidence 6778888887777 899999999999999977222111 22222 2 23333221 122345555555542 11 14
Q ss_pred cc-ceeeCCCCCCeeeeeecCChheeeeeec
Q psy8836 83 AL-LKSVSPGFQPTCLVQLHPPAAVTSLVLH 112 (118)
Q Consensus 83 ~~-~~~~p~G~Q~~~v~q~~Pp~~ITala~~ 112 (118)
+. ..+.+||-+|.+ -++.-|-=|||||+-
T Consensus 360 plf~~~~AHgv~~~~-~~~~~~~Witsla~i 389 (479)
T KOG0299|consen 360 PLFTSRLAHGVIPEL-DPVNGNFWITSLAVI 389 (479)
T ss_pred ceeEeeccccccCCc-cccccccceeeeEec
Confidence 44 567889988876 111222348898874
No 85
>KOG4640|consensus
Probab=75.74 E-value=2.1 Score=37.99 Aligned_cols=64 Identities=19% Similarity=0.237 Sum_probs=47.7
Q ss_pred cccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccc-cccc-cccccCCcccccccCCCCC
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIV-SDRD-SFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~-~~~e-s~~W~~~~~~~~~~~~d~~ 76 (118)
|--|+-|.|||+ -..+.++-++|.|++..+.-.++. .+++. .+.. +++|..+|++-.-.-.||+
T Consensus 20 ~~~i~~~ewnP~-~dLiA~~t~~gelli~R~n~qRlw---tip~p~~~v~~sL~W~~DGkllaVg~kdG~ 85 (665)
T KOG4640|consen 20 PINIKRIEWNPK-MDLIATRTEKGELLIHRLNWQRLW---TIPIPGENVTASLCWRPDGKLLAVGFKDGT 85 (665)
T ss_pred ccceEEEEEcCc-cchhheeccCCcEEEEEeccceeE---eccCCCCccceeeeecCCCCEEEEEecCCe
Confidence 446788999999 899999999999999988866654 33322 3344 8999999998754444443
No 86
>KOG2321|consensus
Probab=75.49 E-value=2.5 Score=37.45 Aligned_cols=47 Identities=13% Similarity=0.328 Sum_probs=40.4
Q ss_pred CCCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeec
Q psy8836 4 HYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMN 51 (118)
Q Consensus 4 ~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~ 51 (118)
+|+++-+.+-.|+.|+. .+.|+.|+..|-|-.||..+++.+..+.+.
T Consensus 170 P~~~~~~~lN~v~in~~-hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~ 216 (703)
T KOG2321|consen 170 PFETDSGELNVVSINEE-HGLLACGTEDGVVEFWDPRDKSRVGTLDAA 216 (703)
T ss_pred ccccccccceeeeecCc-cceEEecccCceEEEecchhhhhheeeecc
Confidence 56777788899999999 999999999999999999888887666555
No 87
>KOG1272|consensus
Probab=75.45 E-value=2 Score=37.07 Aligned_cols=47 Identities=15% Similarity=0.297 Sum_probs=38.6
Q ss_pred CCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccc
Q psy8836 20 GSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLS 68 (118)
Q Consensus 20 ~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~ 68 (118)
.|-+.|++||..|||..+|-.+.... +++++-+...++.|-+..+++
T Consensus 139 rnGrhlllgGrKGHlAa~Dw~t~~L~--~Ei~v~Etv~Dv~~LHneq~~ 185 (545)
T KOG1272|consen 139 RNGRHLLLGGRKGHLAAFDWVTKKLH--FEINVMETVRDVTFLHNEQFF 185 (545)
T ss_pred CCccEEEecCCccceeeeecccceee--eeeehhhhhhhhhhhcchHHH
Confidence 46789999999999999999999874 455555888888887777666
No 88
>KOG0639|consensus
Probab=75.00 E-value=2.2 Score=37.35 Aligned_cols=29 Identities=21% Similarity=0.392 Sum_probs=23.1
Q ss_pred hhhhhCCCCCCeEEEEeecceEEEEeCCCC
Q psy8836 13 EAIAEQPGSPNHIIVGYSKGLVVLWDRTTN 42 (118)
Q Consensus 13 ~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~ 42 (118)
..--+.|. .|.|+|||++..|.|||+.+.
T Consensus 469 RSckL~pd-grtLivGGeastlsiWDLAap 497 (705)
T KOG0639|consen 469 RSCKLLPD-GRTLIVGGEASTLSIWDLAAP 497 (705)
T ss_pred eeeEecCC-CceEEeccccceeeeeeccCC
Confidence 33445565 999999999999999998554
No 89
>KOG0288|consensus
Probab=74.22 E-value=5.5 Score=33.89 Aligned_cols=60 Identities=13% Similarity=0.270 Sum_probs=45.3
Q ss_pred chhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccc-cccccccccCCcccccccC
Q psy8836 12 VEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIV-SDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 12 V~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~-~~~es~~W~~~~~~~~~~~ 72 (118)
+....+.|. .++++-|+..|-|-||+..++..+..+..+=- ..+.++.|...|.--.+.+
T Consensus 390 wtrvvfSpd-~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsad 450 (459)
T KOG0288|consen 390 WTRVVFSPD-GSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSAD 450 (459)
T ss_pred cceeEECCC-CceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhccc
Confidence 556678896 99999999999999999988887754432211 3578899998887665554
No 90
>KOG0319|consensus
Probab=73.09 E-value=2.5 Score=38.13 Aligned_cols=38 Identities=21% Similarity=0.411 Sum_probs=29.7
Q ss_pred CCCCcccchhhhhCCCCCCe-EEEEeecceEEEEeCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNH-IIVGYSKGLVVLWDRTTN 42 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~-LlIgg~~G~VVl~d~~~~ 42 (118)
||.|||.|-.|..+|.-.+. |..|+..|.|.+||..++
T Consensus 143 fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~ 181 (775)
T KOG0319|consen 143 FKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDK 181 (775)
T ss_pred ecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccC
Confidence 67799999999999983443 455667799999987644
No 91
>KOG0315|consensus
Probab=73.00 E-value=3.6 Score=33.14 Aligned_cols=37 Identities=24% Similarity=0.535 Sum_probs=32.2
Q ss_pred CCCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCC
Q psy8836 4 HYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTN 42 (118)
Q Consensus 4 ~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~ 42 (118)
.|+. +-+|..|-.||. -.-|++|-.+|.|-+||+.++
T Consensus 120 ~~~~-~spVn~vvlhpn-QteLis~dqsg~irvWDl~~~ 156 (311)
T KOG0315|consen 120 NYQH-NSPVNTVVLHPN-QTELISGDQSGNIRVWDLGEN 156 (311)
T ss_pred hccC-CCCcceEEecCC-cceEEeecCCCcEEEEEccCC
Confidence 3443 478999999998 999999999999999999777
No 92
>KOG2048|consensus
Probab=72.03 E-value=7.3 Score=34.85 Aligned_cols=67 Identities=21% Similarity=0.230 Sum_probs=41.9
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceee-EEeeccccccccccccCCcccccccCCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQ-ISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~-~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
+-++|=+|+.||+ +.+|.||...|.+..++-..+++.. +...+-...+=++.|+..+.--.....||
T Consensus 109 ~gg~IWsiai~p~-~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg 176 (691)
T KOG2048|consen 109 NGGAIWSIAINPE-NTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDG 176 (691)
T ss_pred CCcceeEEEeCCc-cceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCc
Confidence 3468999999999 8999999999933333444444432 22222012345788998887444444444
No 93
>KOG0313|consensus
Probab=71.91 E-value=4.4 Score=34.13 Aligned_cols=40 Identities=20% Similarity=0.280 Sum_probs=34.2
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCce
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTA 44 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~ 44 (118)
|..|-.=|+.+.|||++..+|+=|.-.|++-+||..+...
T Consensus 341 ~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~ 380 (423)
T KOG0313|consen 341 LIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKA 380 (423)
T ss_pred eecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCC
Confidence 3345557899999999999999999999999999987763
No 94
>KOG0296|consensus
Probab=71.87 E-value=8.8 Score=32.20 Aligned_cols=67 Identities=15% Similarity=0.228 Sum_probs=47.9
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeec-cccccccccccCCcccccccCCCCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMN-IVSDRDSFVWKGHARLSVKHTGDSKD 77 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~-l~~~~es~~W~~~~~~~~~~~~d~~~ 77 (118)
|-.+|..+.++=+ ...|.-|+-+|.|.||+-+++...- .+. =..+++=+.||..+....-...||+.
T Consensus 105 HKDSVt~~~Fshd-gtlLATGdmsG~v~v~~~stg~~~~--~~~~e~~dieWl~WHp~a~illAG~~DGsv 172 (399)
T KOG0296|consen 105 HKDSVTCCSFSHD-GTLLATGDMSGKVLVFKVSTGGEQW--KLDQEVEDIEWLKWHPRAHILLAGSTDGSV 172 (399)
T ss_pred CCCceEEEEEccC-ceEEEecCCCccEEEEEcccCceEE--EeecccCceEEEEecccccEEEeecCCCcE
Confidence 4458889999854 8888899999999999998887742 332 12455666678877766655555553
No 95
>KOG0313|consensus
Probab=71.59 E-value=5.7 Score=33.46 Aligned_cols=63 Identities=14% Similarity=0.167 Sum_probs=52.3
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d 74 (118)
|-++|.++.||+ +..++-++-...|..||+.+......+..+ ..+.++.-...-++-.|.++|
T Consensus 259 Ht~~Vs~V~w~d--~~v~yS~SwDHTIk~WDletg~~~~~~~~~--ksl~~i~~~~~~~Ll~~gssd 321 (423)
T KOG0313|consen 259 HTEPVSSVVWSD--ATVIYSVSWDHTIKVWDLETGGLKSTLTTN--KSLNCISYSPLSKLLASGSSD 321 (423)
T ss_pred cccceeeEEEcC--CCceEeecccceEEEEEeecccceeeeecC--cceeEeecccccceeeecCCC
Confidence 667999999997 788888888999999999999888777777 777777777777777777766
No 96
>KOG2079|consensus
Probab=71.47 E-value=3.5 Score=38.78 Aligned_cols=41 Identities=22% Similarity=0.421 Sum_probs=33.6
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeec
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMN 51 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~ 51 (118)
++|..++++- |.+.|+.|+.+|+|.+||...+.+.+.+...
T Consensus 131 ~~Vtsvafn~-dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~ 171 (1206)
T KOG2079|consen 131 GPVTSVAFNQ-DGSLLLAGLGDGHVTVWDMHRAKILKVITEH 171 (1206)
T ss_pred CcceeeEecC-CCceeccccCCCcEEEEEccCCcceeeeeec
Confidence 5899999986 4999999999999999998887666554433
No 97
>KOG1587|consensus
Probab=71.42 E-value=7.2 Score=34.13 Aligned_cols=100 Identities=14% Similarity=0.194 Sum_probs=61.3
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCC-CCceeeEEeeccccc-cccccc-cCCcccccccCCCCCC----
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRT-TNTANQISTMNIVSD-RDSFVW-KGHARLSVKHTGDSKD---- 77 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~-~~~~~~~~~v~l~~~-~es~~W-~~~~~~~~~~~~d~~~---- 77 (118)
|..|.|.|.+|..+|=..--++.+| +..|.||.+. ....+--+..+ -+ +.++.| -.++..|.+...||+.
T Consensus 394 ~~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~~--~~~v~~vaWSptrpavF~~~d~~G~l~iWD 470 (555)
T KOG1587|consen 394 FITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLDSS--PDYVTDVAWSPTRPAVFATVDGDGNLDIWD 470 (555)
T ss_pred ccccCcceEeeecCCCccceeeeec-cceeEeccccCCCCcchhhhhc--cceeeeeEEcCcCceEEEEEcCCCceehhh
Confidence 5668899999999998444444455 9999999776 55443222222 22 556778 5677788777766653
Q ss_pred --CCCccccceeeCCCCCCeeeeeecCChheee
Q psy8836 78 --KEPSKALLKSVSPGFQPTCLVQLHPPAAVTS 108 (118)
Q Consensus 78 --~~p~k~~~~~~p~G~Q~~~v~q~~Pp~~ITa 108 (118)
....+| ..+.+.+.++...+...++.++-|
T Consensus 471 Ll~~~~~P-v~s~~~~~~~l~~~~~s~~g~~la 502 (555)
T KOG1587|consen 471 LLQDDEEP-VLSQKVCSPALTRVRWSPNGKLLA 502 (555)
T ss_pred hhccccCC-cccccccccccceeecCCCCcEEE
Confidence 111122 223444466666666666665543
No 98
>KOG1539|consensus
Probab=71.24 E-value=6.9 Score=35.93 Aligned_cols=68 Identities=13% Similarity=0.135 Sum_probs=56.5
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
|+.|-..|..+...|+ .+=|++|...+.|-+||..+...+..+.++ ....++.....|.+-.+.|.|.
T Consensus 572 f~gh~nritd~~FS~D-grWlisasmD~tIr~wDlpt~~lID~~~vd--~~~~sls~SPngD~LAT~Hvd~ 639 (910)
T KOG1539|consen 572 FWGHGNRITDMTFSPD-GRWLISASMDSTIRTWDLPTGTLIDGLLVD--SPCTSLSFSPNGDFLATVHVDQ 639 (910)
T ss_pred hhccccceeeeEeCCC-CcEEEEeecCCcEEEEeccCcceeeeEecC--CcceeeEECCCCCEEEEEEecC
Confidence 4556678999999996 999999999999999999999999898888 6666666666777777777663
No 99
>KOG0278|consensus
Probab=71.24 E-value=7.8 Score=31.38 Aligned_cols=39 Identities=21% Similarity=0.183 Sum_probs=34.8
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeE
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQI 47 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~ 47 (118)
-|.-|++-+++|+ .+.++-||+.+.+--||..+.+.+..
T Consensus 223 ~P~nV~SASL~P~-k~~fVaGged~~~~kfDy~TgeEi~~ 261 (334)
T KOG0278|consen 223 MPCNVESASLHPK-KEFFVAGGEDFKVYKFDYNTGEEIGS 261 (334)
T ss_pred CccccccccccCC-CceEEecCcceEEEEEeccCCceeee
Confidence 4889999999998 89999999999999999988877644
No 100
>KOG1446|consensus
Probab=70.24 E-value=4.4 Score=33.03 Aligned_cols=37 Identities=16% Similarity=0.321 Sum_probs=31.8
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTN 42 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~ 42 (118)
|+.|--.|..|+.||.| .+++=|.....|-+||+++.
T Consensus 96 F~GH~~~V~sL~~sP~~-d~FlS~S~D~tvrLWDlR~~ 132 (311)
T KOG1446|consen 96 FPGHKKRVNSLSVSPKD-DTFLSSSLDKTVRLWDLRVK 132 (311)
T ss_pred cCCCCceEEEEEecCCC-CeEEecccCCeEEeeEecCC
Confidence 34566689999999995 99999999999999998744
No 101
>KOG1645|consensus
Probab=70.00 E-value=6.5 Score=33.45 Aligned_cols=61 Identities=11% Similarity=0.031 Sum_probs=52.3
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~ 72 (118)
.+|..|++.|.+.|-|..|...-.+-|+|..+..+++.+... ..+.|.+|......++=.+
T Consensus 194 ~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~--~~~wSC~wDlde~h~IYaG 254 (463)
T KOG1645|consen 194 SFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY--NQIWSCCWDLDERHVIYAG 254 (463)
T ss_pred hhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc--CCceeeeeccCCcceeEEe
Confidence 389999999998888888888889999999999999888877 8899999998887765443
No 102
>KOG0265|consensus
Probab=69.34 E-value=7.7 Score=31.84 Aligned_cols=66 Identities=20% Similarity=0.123 Sum_probs=47.6
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeecccccc-ccccccCCcccccccCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDR-DSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~-es~~W~~~~~~~~~~~~d 74 (118)
|.|-+||--+.+.+. ++.|+-+|+.-.|..||..+++.+..+... ... .++.--.-+.+-+++.+|
T Consensus 87 kgHsgAVM~l~~~~d-~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h--~~~vNs~~p~rrg~~lv~Sgsd 153 (338)
T KOG0265|consen 87 KGHSGAVMELHGMRD-GSHILSCGTDKTVRGWDAETGKRIRKHKGH--TSFVNSLDPSRRGPQLVCSGSD 153 (338)
T ss_pred ccccceeEeeeeccC-CCEEEEecCCceEEEEecccceeeehhccc--cceeeecCccccCCeEEEecCC
Confidence 347789999999986 999999999999999999999887544332 221 122233445555777766
No 103
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=69.18 E-value=6.9 Score=32.00 Aligned_cols=63 Identities=11% Similarity=0.154 Sum_probs=51.3
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCC
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d 74 (118)
-|..|.++|+ +|+|..-.+.+--+|+=-...+++.+...+-..|.|+++|-|.+++.+..+.+
T Consensus 87 nvS~LTynp~-~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~ 149 (316)
T COG3204 87 NVSSLTYNPD-TRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERD 149 (316)
T ss_pred cccceeeCCC-cceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhc
Confidence 3778999998 99999888888888886667777777777777999999999998887655544
No 104
>KOG0266|consensus
Probab=69.15 E-value=6.7 Score=32.75 Aligned_cols=67 Identities=15% Similarity=0.209 Sum_probs=45.8
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCcee--eEEeecccc-ccccccccCCcccccccCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTAN--QISTMNIVS-DRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~--~~~~v~l~~-~~es~~W~~~~~~~~~~~~d 74 (118)
.|=..|..++..++ -+.|+.|...|.|.+||..+.+.. ..+.-.... .+.++.|+.+++.......|
T Consensus 286 ~hs~~is~~~f~~d-~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d 355 (456)
T KOG0266|consen 286 GHSDGISGLAFSPD-GNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLD 355 (456)
T ss_pred ccCCceEEEEECCC-CCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCC
Confidence 35568888889986 889999988999999999888842 221111001 24556677777777666655
No 105
>KOG0269|consensus
Probab=68.27 E-value=5.9 Score=36.03 Aligned_cols=58 Identities=21% Similarity=0.400 Sum_probs=47.1
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcc
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHAR 66 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~ 66 (118)
|-|.|--+.|+| |-.-|.-||..++|-|||..+.+.-....++-...+..+.|...-+
T Consensus 219 H~GpV~c~nwhP-nr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~ 276 (839)
T KOG0269|consen 219 HNGPVLCLNWHP-NREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARS 276 (839)
T ss_pred ccCceEEEeecC-CCceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeeccCcc
Confidence 668888999999 5999999999999999988777666566677667778888875543
No 106
>KOG0285|consensus
Probab=68.11 E-value=15 Score=31.09 Aligned_cols=94 Identities=17% Similarity=0.198 Sum_probs=57.9
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEe-eccccccccccccCCcccccccCCCCCCCCCccccc
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIST-MNIVSDRDSFVWKGHARLSVKHTGDSKDKEPSKALL 85 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~-v~l~~~~es~~W~~~~~~~~~~~~d~~~~~p~k~~~ 85 (118)
.|-.+|..+...|. ..+++-|...+.|-|||+..++....+. -+ .....++-|....+|.+.+.| ++- .
T Consensus 275 GH~~~V~~V~~~~~-dpqvit~S~D~tvrlWDl~agkt~~tlt~hk--ksvral~lhP~e~~fASas~d---nik----~ 344 (460)
T KOG0285|consen 275 GHTNPVASVMCQPT-DPQVITGSHDSTVRLWDLRAGKTMITLTHHK--KSVRALCLHPKENLFASASPD---NIK----Q 344 (460)
T ss_pred CCCCcceeEEeecC-CCceEEecCCceEEEeeeccCceeEeeeccc--ceeeEEecCCchhhhhccCCc---cce----e
Confidence 35668888888888 7889999999999999998886653322 11 122233333333444455533 333 4
Q ss_pred eeeCCCCCCeeeeee--cCChheeeeeeccc
Q psy8836 86 KSVSPGFQPTCLVQL--HPPAAVTSLVLHTE 114 (118)
Q Consensus 86 ~~~p~G~Q~~~v~q~--~Pp~~ITala~~s~ 114 (118)
.++|.|-- +|- -.-+-|.+|++|+.
T Consensus 345 w~~p~g~f----~~nlsgh~~iintl~~nsD 371 (460)
T KOG0285|consen 345 WKLPEGEF----LQNLSGHNAIINTLSVNSD 371 (460)
T ss_pred ccCCccch----hhccccccceeeeeeeccC
Confidence 45666621 111 15568899998875
No 107
>KOG0649|consensus
Probab=67.33 E-value=16 Score=29.50 Aligned_cols=40 Identities=15% Similarity=0.184 Sum_probs=32.9
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeec
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMN 51 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~ 51 (118)
-|.++.+.|. +|-++.||-.|++--||+.+..+...+...
T Consensus 116 eINam~ldP~-enSi~~AgGD~~~y~~dlE~G~i~r~~rGH 155 (325)
T KOG0649|consen 116 EINAMWLDPS-ENSILFAGGDGVIYQVDLEDGRIQREYRGH 155 (325)
T ss_pred ccceeEeccC-CCcEEEecCCeEEEEEEecCCEEEEEEcCC
Confidence 5778899999 999999999999999999999886544433
No 108
>KOG1240|consensus
Probab=66.92 E-value=5.5 Score=38.08 Aligned_cols=35 Identities=34% Similarity=0.577 Sum_probs=30.3
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCcee
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTAN 45 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~ 45 (118)
|.|..|.-.|. -+-|+||-++|++++||+.=+..+
T Consensus 1196 G~vTSi~idp~-~~WlviGts~G~l~lWDLRF~~~i 1230 (1431)
T KOG1240|consen 1196 GLVTSIVIDPW-CNWLVIGTSRGQLVLWDLRFRVPI 1230 (1431)
T ss_pred cceeEEEecCC-ceEEEEecCCceEEEEEeecCcee
Confidence 79999999998 789999999999999987555444
No 109
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=66.80 E-value=10 Score=35.06 Aligned_cols=57 Identities=11% Similarity=0.222 Sum_probs=44.9
Q ss_pred cccchhhhhCCCCCCeEEEEeecceEEEE----eCCCCceeeEEeeccccccccccccCCcccc
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGYSKGLVVLW----DRTTNTANQISTMNIVSDRDSFVWKGHARLS 68 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg~~G~VVl~----d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~ 68 (118)
...|..++..++ .+.||++..+|-|+++ |..+.++..+=.++ ..+....|..++.+.
T Consensus 75 ~~~ivs~~yl~d-~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~vd--~GI~a~~WSPD~Ell 135 (928)
T PF04762_consen 75 NDKIVSFQYLAD-SESLCIALASGDIILVREDPDPDEDEIEIVGSVD--SGILAASWSPDEELL 135 (928)
T ss_pred CCcEEEEEeccC-CCcEEEEECCceEEEEEccCCCCCceeEEEEEEc--CcEEEEEECCCcCEE
Confidence 358899999997 9999999999999999 55665555444556 778888898777655
No 110
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=66.80 E-value=12 Score=30.78 Aligned_cols=56 Identities=16% Similarity=0.202 Sum_probs=45.2
Q ss_pred CcccchhhhhCCCCCCeEEEE----------eecceEEEEeCCCCceeeEEeeccccccccccccCCcc
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVG----------YSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHAR 66 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIg----------g~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~ 66 (118)
.|+-+|-|+.+|. .++|.|+ ..+++|.++|..+.+++.++.+. ...+++.-..+++
T Consensus 246 rP~g~q~ia~~~d-g~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG--~~~~~iavS~Dgk 311 (352)
T TIGR02658 246 RPGGWQQVAYHRA-RDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELG--HEIDSINVSQDAK 311 (352)
T ss_pred CCCcceeEEEcCC-CCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCC--CceeeEEECCCCC
Confidence 4777888999997 9999995 34469999999999999888877 7777777666666
No 111
>KOG4283|consensus
Probab=66.73 E-value=5.8 Score=32.76 Aligned_cols=44 Identities=14% Similarity=0.071 Sum_probs=38.4
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeec
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMN 51 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~ 51 (118)
|-++|+...|-|-|+|++.-+.-...+-+||-.|-+++..|.+.
T Consensus 100 Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~me 143 (397)
T KOG4283|consen 100 HKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFKME 143 (397)
T ss_pred ceeeeeeeEEeeecCceeecccccceEEEeecccceeeEEeecC
Confidence 56799999999999999999999999999999888776555554
No 112
>KOG4714|consensus
Probab=66.51 E-value=3.6 Score=33.29 Aligned_cols=38 Identities=21% Similarity=0.428 Sum_probs=33.3
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTN 42 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~ 42 (118)
||-|--+|-.+-+||.|+.+|.++.+.|-+.-||.+++
T Consensus 219 l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~~ 256 (319)
T KOG4714|consen 219 LKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDASTT 256 (319)
T ss_pred HHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCCc
Confidence 44466688889999999999999999999999999874
No 113
>KOG1983|consensus
Probab=65.55 E-value=4.7 Score=37.50 Aligned_cols=70 Identities=26% Similarity=0.314 Sum_probs=50.0
Q ss_pred CCCC-CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCCC
Q psy8836 2 PDHY-KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSKD 77 (118)
Q Consensus 2 ~~~y-~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~~ 77 (118)
++.| +-+..+.+.....+....++.++|..|+++.|+...+.+.+.+..+ ... |..++..++..|+|++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~v~~h~Dgs~ 258 (993)
T KOG1983|consen 188 PDAYLGLSLIEYESLQVLYYSPTKILIGFNRGLVVIKDRASKYVQSAYLPN--GQL----ESRDGSHFVSYHTDGSY 258 (993)
T ss_pred ccccccccccccccceeeeecCCCcceeeeeeeeeehhcccccchhhcccc--ccc----CccCCceEEEEEecCCE
Confidence 3444 4466777777888888899999999999999998888777666666 332 24555556666666554
No 114
>KOG0643|consensus
Probab=65.02 E-value=10 Score=30.86 Aligned_cols=62 Identities=23% Similarity=0.210 Sum_probs=45.1
Q ss_pred CCCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccc
Q psy8836 4 HYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLS 68 (118)
Q Consensus 4 ~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~ 68 (118)
.|+.|-|||=.|.-+=. |..|+-|...-.+.|||-++.+.+..+..+ ....++.....|.+.
T Consensus 47 ty~GHtGavW~~Did~~-s~~liTGSAD~t~kLWDv~tGk~la~~k~~--~~Vk~~~F~~~gn~~ 108 (327)
T KOG0643|consen 47 TYDGHTGAVWCCDIDWD-SKHLITGSADQTAKLWDVETGKQLATWKTN--SPVKRVDFSFGGNLI 108 (327)
T ss_pred eecCCCceEEEEEecCC-cceeeeccccceeEEEEcCCCcEEEEeecC--CeeEEEeeccCCcEE
Confidence 47889999988887754 777777777788999999999988777777 444444444444433
No 115
>KOG0294|consensus
Probab=64.93 E-value=9.7 Score=31.51 Aligned_cols=37 Identities=22% Similarity=0.486 Sum_probs=30.0
Q ss_pred CCCCcccchhhh--hCCCCCCeEEEEeecceEEEEeCCCC
Q psy8836 5 YKLNPGAVEAIA--EQPGSPNHIIVGYSKGLVVLWDRTTN 42 (118)
Q Consensus 5 y~~~p~aV~~I~--~cP~ds~~LlIgg~~G~VVl~d~~~~ 42 (118)
+..|+-.|+.|. .+|+ .-.|.-+++.|.|.+||...+
T Consensus 245 ~~AH~~RVK~i~~~~~~~-~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 245 FLAHENRVKDIASYTNPE-HEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred eecchhheeeeEEEecCC-ceEEEEeccCceEEEEEcccc
Confidence 445778899887 7787 888899999999999976544
No 116
>KOG4283|consensus
Probab=64.54 E-value=5.4 Score=32.94 Aligned_cols=35 Identities=14% Similarity=0.298 Sum_probs=30.1
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTN 42 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~ 42 (118)
|-|.|..++-.|..-+.++-||..|-+++||+++.
T Consensus 42 HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~ 76 (397)
T KOG4283|consen 42 HGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNA 76 (397)
T ss_pred CCCccceeeeccccceEEeecCCCccEEEEEeccc
Confidence 56799999999987888899999999999987443
No 117
>PF06753 Bradykinin: Bradykinin; InterPro: IPR009608 This family consists of several bradykinin sequences. The skins of anuran amphibians, in addition to mucus glands, contain highly specialised poison glands, which, in reaction to stress or attack, exude a complex noxious cocktail of biologically active molecules. These secretions often contain a plethora of peptides among which bradykinin or structural variants have been identified [].; GO: 0005179 hormone activity, 0006950 response to stress, 0005576 extracellular region
Probab=64.19 E-value=3.5 Score=19.87 Aligned_cols=10 Identities=40% Similarity=0.876 Sum_probs=8.0
Q ss_pred eeeCCCCCCe
Q psy8836 86 KSVSPGFQPT 95 (118)
Q Consensus 86 ~~~p~G~Q~~ 95 (118)
.|.|+||.|+
T Consensus 2 qr~p~gftpf 11 (19)
T PF06753_consen 2 QRRPPGFTPF 11 (19)
T ss_pred CccCCCCCcc
Confidence 3789999885
No 118
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=63.91 E-value=13 Score=27.19 Aligned_cols=58 Identities=19% Similarity=0.261 Sum_probs=41.2
Q ss_pred CCCcccchhhhhCCCCCCeEEEEee-cceEEEEeCCCCceeeEEee-ccccccccccccCCcc
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYS-KGLVVLWDRTTNTANQISTM-NIVSDRDSFVWKGHAR 66 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~-~G~VVl~d~~~~~~~~~~~v-~l~~~~es~~W~~~~~ 66 (118)
..|...|..+++.|. .+.++.++. .|.+.+|+..+...+..+.. + ..+.++.|...++
T Consensus 152 ~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~ 211 (466)
T COG2319 152 EGHSESVTSLAFSPD-GKLLASGSSLDGTIKLWDLRTGKPLSTLAGHT--DPVSSLAFSPDGG 211 (466)
T ss_pred ecCcccEEEEEECCC-CCEEEecCCCCCceEEEEcCCCceEEeeccCC--CceEEEEEcCCcc
Confidence 346778889999997 667777775 99999999887655544443 2 4456677775555
No 119
>KOG0271|consensus
Probab=63.80 E-value=5.9 Score=33.64 Aligned_cols=66 Identities=15% Similarity=0.262 Sum_probs=48.6
Q ss_pred CCCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccc---cccccccccCCcccccccCCC
Q psy8836 4 HYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIV---SDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 4 ~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~---~~~es~~W~~~~~~~~~~~~d 74 (118)
.||.|=.+|=+|+|.-. ||.|+-|...-.+-+||.+++...+ +|. .+.-.+.|..+|+...+.+.|
T Consensus 404 sfRGHv~~VYqvawsaD-sRLlVS~SkDsTLKvw~V~tkKl~~----DLpGh~DEVf~vDwspDG~rV~sggkd 472 (480)
T KOG0271|consen 404 SFRGHVAAVYQVAWSAD-SRLLVSGSKDSTLKVWDVRTKKLKQ----DLPGHADEVFAVDWSPDGQRVASGGKD 472 (480)
T ss_pred hhhhccceeEEEEeccC-ccEEEEcCCCceEEEEEeeeeeecc----cCCCCCceEEEEEecCCCceeecCCCc
Confidence 36678889999999974 8888888888999999998887642 222 233456699998886665533
No 120
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=63.70 E-value=9.5 Score=29.83 Aligned_cols=62 Identities=11% Similarity=0.179 Sum_probs=45.5
Q ss_pred chhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCC
Q psy8836 12 VEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 12 V~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d 74 (118)
+-.|+++|++..-++|....+.|+-++.. ++++..+...=..|.|++++-+.+++-++++.+
T Consensus 24 ~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~ 85 (248)
T PF06977_consen 24 LSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGRYVLSEERD 85 (248)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS-SSEEEEEE-STTEEEEEETTT
T ss_pred ccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCEEEEEEcCC
Confidence 67789999856678899999999888864 677776665545789999999999888777644
No 121
>KOG0268|consensus
Probab=63.45 E-value=3.4 Score=34.75 Aligned_cols=42 Identities=17% Similarity=0.364 Sum_probs=33.2
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEe
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIST 49 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~ 49 (118)
|-.-|..|+-+|+...++.-|.-.|+|-|||+++.+-...+.
T Consensus 65 HrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~ 106 (433)
T KOG0268|consen 65 HRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFK 106 (433)
T ss_pred cccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheee
Confidence 444688999999966999999999999999987765543333
No 122
>KOG0295|consensus
Probab=63.33 E-value=27 Score=29.38 Aligned_cols=72 Identities=14% Similarity=0.151 Sum_probs=46.7
Q ss_pred CCCCcccchhhhhCCC-------------CCC-eEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccc
Q psy8836 5 YKLNPGAVEAIAEQPG-------------SPN-HIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVK 70 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~-------------ds~-~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~ 70 (118)
++.|-.+||-|+|-|+ |.+ .|..|...+.|-+||..+...+ +..+..-+-+.++.-+.+|+.-.+
T Consensus 273 lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL-~tL~ghdnwVr~~af~p~Gkyi~S 351 (406)
T KOG0295|consen 273 LREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCL-FTLVGHDNWVRGVAFSPGGKYILS 351 (406)
T ss_pred hhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEE-EEEecccceeeeeEEcCCCeEEEE
Confidence 3456678888888774 122 4555555699999999999665 223332244556667888888777
Q ss_pred cCCCCCC
Q psy8836 71 HTGDSKD 77 (118)
Q Consensus 71 ~~~d~~~ 77 (118)
...|.+.
T Consensus 352 caDDktl 358 (406)
T KOG0295|consen 352 CADDKTL 358 (406)
T ss_pred EecCCcE
Confidence 7756544
No 123
>KOG2321|consensus
Probab=62.92 E-value=12 Score=33.26 Aligned_cols=56 Identities=18% Similarity=0.277 Sum_probs=37.7
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcc
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHAR 66 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~ 66 (118)
-+|.+|+..= |.-.+-||-+.|+|.|||+.+.+.+-+-.=+---++..+.|...+.
T Consensus 229 ~svTal~F~d-~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~ 284 (703)
T KOG2321|consen 229 PSVTALKFRD-DGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQ 284 (703)
T ss_pred CcceEEEecC-CceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCC
Confidence 3599999984 3778999999999999999888775221111002345667755533
No 124
>KOG4497|consensus
Probab=62.65 E-value=12 Score=31.46 Aligned_cols=57 Identities=16% Similarity=0.152 Sum_probs=41.2
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLS 68 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~ 68 (118)
.|+.|.|..+.--+||++|.+|.|-+|++...|--.-+... +..+.+.+|..+|+.-
T Consensus 50 ki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg-~agls~~~WSPdgrhi 106 (447)
T KOG4497|consen 50 KIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEG-QAGLSSISWSPDGRHI 106 (447)
T ss_pred HhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccC-CCcceeeeECCCcceE
Confidence 57889999886788999999999999999877653222211 0235566798888644
No 125
>KOG0279|consensus
Probab=62.36 E-value=8.9 Score=31.20 Aligned_cols=44 Identities=18% Similarity=0.216 Sum_probs=34.3
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeec
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMN 51 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~ 51 (118)
.|-+-|..+...|. -.+..=||..|.+.|||+..++.+..+...
T Consensus 190 gh~~~v~t~~vSpD-GslcasGgkdg~~~LwdL~~~k~lysl~a~ 233 (315)
T KOG0279|consen 190 GHSGYVNTVTVSPD-GSLCASGGKDGEAMLWDLNEGKNLYSLEAF 233 (315)
T ss_pred cccccEEEEEECCC-CCEEecCCCCceEEEEEccCCceeEeccCC
Confidence 35567888899996 666667888999999999888777665544
No 126
>KOG1274|consensus
Probab=61.73 E-value=15 Score=33.95 Aligned_cols=66 Identities=14% Similarity=0.121 Sum_probs=45.2
Q ss_pred cccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccc-cccccccCCcccccccCCCC
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSD-RDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~-~es~~W~~~~~~~~~~~~d~ 75 (118)
-+.+...+|+|. +|+|++....+-|++|+..+-+..-.+.-+.... +..+.|..-|+.-..+..|+
T Consensus 188 s~i~~~~aW~Pk-~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g 254 (933)
T KOG1274|consen 188 SRICTRLAWHPK-GGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDG 254 (933)
T ss_pred cceeeeeeecCC-CCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCC
Confidence 346778899998 9999999999999999776666643333332211 33345777777665555443
No 127
>KOG0291|consensus
Probab=61.68 E-value=16 Score=33.48 Aligned_cols=97 Identities=10% Similarity=0.187 Sum_probs=64.9
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCC-ceeeEEeeccccccccccccCCcccccccCCCCCCCCCccccce
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTN-TANQISTMNIVSDRDSFVWKGHARLSVKHTGDSKDKEPSKALLK 86 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~-~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~~~~p~k~~~~ 86 (118)
|-.++..++-.|. ...+.-|++.|-|-|||..+. +.+...+=. .....+.|+..++.-.+++.||+-+.=- +
T Consensus 349 H~~~i~~l~YSpD-gq~iaTG~eDgKVKvWn~~SgfC~vTFteHt--s~Vt~v~f~~~g~~llssSLDGtVRAwD----l 421 (893)
T KOG0291|consen 349 HSDRITSLAYSPD-GQLIATGAEDGKVKVWNTQSGFCFVTFTEHT--SGVTAVQFTARGNVLLSSSLDGTVRAWD----L 421 (893)
T ss_pred cccceeeEEECCC-CcEEEeccCCCcEEEEeccCceEEEEeccCC--CceEEEEEEecCCEEEEeecCCeEEeee----e
Confidence 5568889999996 888888999999999988664 665444444 5667788999998888888887543110 0
Q ss_pred eeCCCCCCeeeeeecCChheeeeeeccc
Q psy8836 87 SVSPGFQPTCLVQLHPPAAVTSLVLHTE 114 (118)
Q Consensus 87 ~~p~G~Q~~~v~q~~Pp~~ITala~~s~ 114 (118)
.-|.=.-..++.-|.|-.+||+..+
T Consensus 422 ---kRYrNfRTft~P~p~QfscvavD~s 446 (893)
T KOG0291|consen 422 ---KRYRNFRTFTSPEPIQFSCVAVDPS 446 (893)
T ss_pred ---cccceeeeecCCCceeeeEEEEcCC
Confidence 0122222234445666667776654
No 128
>KOG2055|consensus
Probab=61.28 E-value=7.9 Score=33.39 Aligned_cols=58 Identities=12% Similarity=0.149 Sum_probs=39.6
Q ss_pred chhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccC
Q psy8836 12 VEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 12 V~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~ 72 (118)
++.-...|. ++.|+|+|..|+|-|-...|++-+..+-++ --+.++.|..+++.-..++
T Consensus 306 ~e~FeVShd-~~fia~~G~~G~I~lLhakT~eli~s~Kie--G~v~~~~fsSdsk~l~~~~ 363 (514)
T KOG2055|consen 306 MERFEVSHD-SNFIAIAGNNGHIHLLHAKTKELITSFKIE--GVVSDFTFSSDSKELLASG 363 (514)
T ss_pred hheeEecCC-CCeEEEcccCceEEeehhhhhhhhheeeec--cEEeeEEEecCCcEEEEEc
Confidence 333444564 899999999999999987777776555555 4556666666665544333
No 129
>KOG0650|consensus
Probab=61.15 E-value=3.3 Score=36.83 Aligned_cols=101 Identities=15% Similarity=0.100 Sum_probs=59.7
Q ss_pred CCCCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCCCC----
Q psy8836 3 DHYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSKDK---- 78 (118)
Q Consensus 3 ~~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~~~---- 78 (118)
.+|+.--|.|+...+||. .-.|+||.. -.|.+||+...+.+.-+.-+ ..-+.++.=|..|-.-+..+.|.+..
T Consensus 560 ~PF~kskG~vq~v~FHPs-~p~lfVaTq-~~vRiYdL~kqelvKkL~tg-~kwiS~msihp~GDnli~gs~d~k~~WfDl 636 (733)
T KOG0650|consen 560 SPFRKSKGLVQRVKFHPS-KPYLFVATQ-RSVRIYDLSKQELVKKLLTG-SKWISSMSIHPNGDNLILGSYDKKMCWFDL 636 (733)
T ss_pred CchhhcCCceeEEEecCC-CceEEEEec-cceEEEehhHHHHHHHHhcC-CeeeeeeeecCCCCeEEEecCCCeeEEEEc
Confidence 356666789999999998 888888854 58999999888776322111 01122333344444444444332210
Q ss_pred -CCccccceeeCCCCCCeeeeeecCChheeeeeecccccCC
Q psy8836 79 -EPSKALLKSVSPGFQPTCLVQLHPPAAVTSLVLHTEWGEY 118 (118)
Q Consensus 79 -~p~k~~~~~~p~G~Q~~~v~q~~Pp~~ITala~~s~~gL~ 118 (118)
...| |.++ .-....++|++|.|-.|.|+
T Consensus 637 dlssk--Pyk~----------lr~H~~avr~Va~H~ryPLf 665 (733)
T KOG0650|consen 637 DLSSK--PYKT----------LRLHEKAVRSVAFHKRYPLF 665 (733)
T ss_pred ccCcc--hhHH----------hhhhhhhhhhhhhcccccee
Confidence 0001 1111 11267899999999999885
No 130
>KOG0293|consensus
Probab=60.34 E-value=3.7 Score=35.12 Aligned_cols=32 Identities=16% Similarity=0.420 Sum_probs=29.2
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEe
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWD 38 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d 38 (118)
.|-+.|.-++|||.|..++.-|+..|.|-||-
T Consensus 480 GHs~~vNcVswNP~~p~m~ASasDDgtIRIWg 511 (519)
T KOG0293|consen 480 GHSKTVNCVSWNPADPEMFASASDDGTIRIWG 511 (519)
T ss_pred CCcceeeEEecCCCCHHHhhccCCCCeEEEec
Confidence 35678999999999999999999999999994
No 131
>KOG1539|consensus
Probab=60.07 E-value=19 Score=33.23 Aligned_cols=46 Identities=13% Similarity=0.272 Sum_probs=39.0
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeec
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMN 51 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~ 51 (118)
|+..+-.|+.|.-.|- -.-+.||-.+|.|++++++..+++-.|..+
T Consensus 198 f~~~~s~IT~ieqsPa-LDVVaiG~~~G~ViifNlK~dkil~sFk~d 243 (910)
T KOG1539|consen 198 FQEFFSRITAIEQSPA-LDVVAIGLENGTVIIFNLKFDKILMSFKQD 243 (910)
T ss_pred ecccccceeEeccCCc-ceEEEEeccCceEEEEEcccCcEEEEEEcc
Confidence 3444568999999999 999999999999999999999998665544
No 132
>KOG0318|consensus
Probab=59.13 E-value=19 Score=31.71 Aligned_cols=67 Identities=12% Similarity=0.128 Sum_probs=51.2
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccc--cccccccccCCcccccccCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIV--SDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~--~~~es~~W~~~~~~~~~~~~d 74 (118)
.|-.=|+.+..+|. -.++.-+|..|.|++||-++.|.+-.+.-+-- -.+-.+.|..+.+++.+.+.|
T Consensus 188 ~HskFV~~VRysPD-G~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaD 256 (603)
T KOG0318|consen 188 EHSKFVNCVRYSPD-GSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSAD 256 (603)
T ss_pred ccccceeeEEECCC-CCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCC
Confidence 45567888999997 88999999999999999999999865553200 112356799999888777766
No 133
>KOG0283|consensus
Probab=59.07 E-value=8.7 Score=34.65 Aligned_cols=59 Identities=15% Similarity=0.213 Sum_probs=45.6
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccc
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLS 68 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~ 68 (118)
|+-=|+.|++||.|-|.++=|.-.|-|-||+...++++.-..++ +=+..++-..+|+..
T Consensus 408 HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~--~lITAvcy~PdGk~a 466 (712)
T KOG0283|consen 408 HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLR--DLITAVCYSPDGKGA 466 (712)
T ss_pred cCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehhhh--hhheeEEeccCCceE
Confidence 66679999999999999999999999999999999998554444 444445544444443
No 134
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=58.89 E-value=20 Score=29.28 Aligned_cols=51 Identities=12% Similarity=0.113 Sum_probs=37.1
Q ss_pred hhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCccccc
Q psy8836 16 AEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSV 69 (118)
Q Consensus 16 ~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~ 69 (118)
...| |.+.+.|++..|.|.++|+.+.+++..+.+- ....++....+|+...
T Consensus 43 ~~s~-Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G--~~~~~i~~s~DG~~~~ 93 (369)
T PF02239_consen 43 KFSP-DGRYLYVANRDGTVSVIDLATGKVVATIKVG--GNPRGIAVSPDGKYVY 93 (369)
T ss_dssp E-TT--SSEEEEEETTSEEEEEETTSSSEEEEEE-S--SEEEEEEE--TTTEEE
T ss_pred EecC-CCCEEEEEcCCCeEEEEECCcccEEEEEecC--CCcceEEEcCCCCEEE
Confidence 3455 4899999999999999999999998777666 6666777666676553
No 135
>KOG0276|consensus
Probab=58.80 E-value=12 Score=33.67 Aligned_cols=101 Identities=17% Similarity=0.168 Sum_probs=63.9
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccc-cCCc-ccccccCCCCCCCCCcc
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVW-KGHA-RLSVKHTGDSKDKEPSK 82 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W-~~~~-~~~~~~~~d~~~~~p~k 82 (118)
|-.|-+=|-+|+.||+|++++.-|.-.+.|-+|.+.+......++.. ...+.+++. ++.+ +.-++...|-..+
T Consensus 136 feGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gH-ekGVN~Vdyy~~gdkpylIsgaDD~tiK---- 210 (794)
T KOG0276|consen 136 FEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGH-EKGVNCVDYYTGGDKPYLISGADDLTIK---- 210 (794)
T ss_pred EcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeecc-ccCcceEEeccCCCcceEEecCCCceEE----
Confidence 44466778899999999999999999999999998777665444322 012334432 2222 2334444331111
Q ss_pred ccceeeCCCCCCeeeeeec--CChheeeeeeccccc
Q psy8836 83 ALLKSVSPGFQPTCLVQLH--PPAAVTSLVLHTEWG 116 (118)
Q Consensus 83 ~~~~~~p~G~Q~~~v~q~~--Pp~~ITala~~s~~g 116 (118)
.| -||-...+|.. --..|.++..|++.-
T Consensus 211 ----vW--DyQtk~CV~TLeGHt~Nvs~v~fhp~lp 240 (794)
T KOG0276|consen 211 ----VW--DYQTKSCVQTLEGHTNNVSFVFFHPELP 240 (794)
T ss_pred ----Ee--ecchHHHHHHhhcccccceEEEecCCCc
Confidence 22 57877777776 455677777776653
No 136
>KOG0296|consensus
Probab=57.69 E-value=15 Score=30.94 Aligned_cols=68 Identities=18% Similarity=0.252 Sum_probs=50.0
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccc---cccccccCCcccccccCCCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSD---RDSFVWKGHARLSVKHTGDSKD 77 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~---~es~~W~~~~~~~~~~~~d~~~ 77 (118)
|+.|-.+|=+++.+| +.+-++-||..-.--||+..+.+.. ..++.- +.+..|.+++.+-.+..-+|+.
T Consensus 60 F~~H~~svFavsl~P-~~~l~aTGGgDD~AflW~~~~ge~~----~eltgHKDSVt~~~FshdgtlLATGdmsG~v 130 (399)
T KOG0296|consen 60 FDKHTDSVFAVSLHP-NNNLVATGGGDDLAFLWDISTGEFA----GELTGHKDSVTCCSFSHDGTLLATGDMSGKV 130 (399)
T ss_pred hhhcCCceEEEEeCC-CCceEEecCCCceEEEEEccCCcce----eEecCCCCceEEEEEccCceEEEecCCCccE
Confidence 445777899999999 5999999999999999999988843 222222 3344588888877666655544
No 137
>KOG0316|consensus
Probab=57.67 E-value=9.6 Score=30.61 Aligned_cols=44 Identities=16% Similarity=0.129 Sum_probs=35.1
Q ss_pred CCCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEE
Q psy8836 4 HYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIS 48 (118)
Q Consensus 4 ~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~ 48 (118)
.|+.|=.-|--.+..- |+.|++-+|..-+|.+||..+.+++.+|
T Consensus 54 tYsghG~EVlD~~~s~-Dnskf~s~GgDk~v~vwDV~TGkv~Rr~ 97 (307)
T KOG0316|consen 54 TYSGHGHEVLDAALSS-DNSKFASCGGDKAVQVWDVNTGKVDRRF 97 (307)
T ss_pred eecCCCceeeeccccc-cccccccCCCCceEEEEEcccCeeeeec
Confidence 3566655666666664 5999999999999999999999998665
No 138
>KOG0310|consensus
Probab=57.37 E-value=36 Score=29.47 Aligned_cols=69 Identities=16% Similarity=0.136 Sum_probs=37.8
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCC-cccccccCCCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGH-ARLSVKHTGDSK 76 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~-~~~~~~~~~d~~ 76 (118)
.|-.+|.-+..||.|.-.|.-|+..+.+-+||..+..+ +.....=..-..+..|..- +-..++.+.|++
T Consensus 108 ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v-~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~ 177 (487)
T KOG0310|consen 108 AHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYV-QAELSGHTDYVRCGDISPANDHIVVTGSYDGK 177 (487)
T ss_pred hccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEE-EEEecCCcceeEeeccccCCCeEEEecCCCce
Confidence 35567888999999544444455555555668777765 2211110011234445433 335566666764
No 139
>KOG1334|consensus
Probab=57.14 E-value=6 Score=34.37 Aligned_cols=70 Identities=16% Similarity=0.200 Sum_probs=46.5
Q ss_pred CCCCCCc--ccchhhh-hCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCC
Q psy8836 3 DHYKLNP--GAVEAIA-EQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 3 ~~y~~~p--~aV~~I~-~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d 74 (118)
-.||.|- ..|+-.- +=|. +..++=|..+|+|-+||-++.++++..+.+-. -+.++.-|.+-+.-.+++-|
T Consensus 385 ~vYKGHrN~~TVKgVNFfGPr-sEyVvSGSDCGhIFiW~K~t~eii~~MegDr~-VVNCLEpHP~~PvLAsSGid 457 (559)
T KOG1334|consen 385 RVYKGHRNSRTVKGVNFFGPR-SEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRH-VVNCLEPHPHLPVLASSGID 457 (559)
T ss_pred hhhcccccccccceeeeccCc-cceEEecCccceEEEEecchhHHHHHhhcccc-eEeccCCCCCCchhhccCCc
Confidence 3466643 3555543 4487 89999999999999999999998865554411 12345555565655666655
No 140
>KOG2315|consensus
Probab=56.85 E-value=13 Score=32.71 Aligned_cols=60 Identities=17% Similarity=0.223 Sum_probs=43.6
Q ss_pred ccchhhhhCCCCCCeEEEEee---cceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYS---KGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTG 73 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~---~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~ 73 (118)
|+=..+.++|. .+.||+||= .|.|-+||-.+.+-+..+.+. +-.=++|+.+|+.+++..+
T Consensus 312 gpRN~~~fnp~-g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~---~tt~~eW~PdGe~flTATT 374 (566)
T KOG2315|consen 312 GPRNTAFFNPH-GNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAA---NTTVFEWSPDGEYFLTATT 374 (566)
T ss_pred CCccceEECCC-CCEEEEeecCCCCCceEEEeccchhhccccccC---CceEEEEcCCCcEEEEEec
Confidence 46677889998 999999986 499999998776555333322 2234569999988876654
No 141
>KOG1274|consensus
Probab=56.74 E-value=13 Score=34.44 Aligned_cols=39 Identities=21% Similarity=0.348 Sum_probs=34.1
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCcee
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTAN 45 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~ 45 (118)
+.|-++|.+|..+|+ -+-|.+.-..|.|-+||+.+....
T Consensus 135 rgh~apVl~l~~~p~-~~fLAvss~dG~v~iw~~~~~~~~ 173 (933)
T KOG1274|consen 135 RGHDAPVLQLSYDPK-GNFLAVSSCDGKVQIWDLQDGILS 173 (933)
T ss_pred cccCCceeeeeEcCC-CCEEEEEecCceEEEEEcccchhh
Confidence 446789999999999 899999999999999998877664
No 142
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=56.38 E-value=23 Score=17.92 Aligned_cols=24 Identities=21% Similarity=0.268 Sum_probs=19.9
Q ss_pred CCeEEEEeecceEEEEeCCCCcee
Q psy8836 22 PNHIIVGYSKGLVVLWDRTTNTAN 45 (118)
Q Consensus 22 s~~LlIgg~~G~VVl~d~~~~~~~ 45 (118)
.+++.++...|.+.-+|..+.+..
T Consensus 6 ~~~v~~~~~~g~l~a~d~~~G~~~ 29 (33)
T smart00564 6 DGTVYVGSTDGTLYALDAKTGEIL 29 (33)
T ss_pred CCEEEEEcCCCEEEEEEcccCcEE
Confidence 457888888999999999888764
No 143
>KOG1446|consensus
Probab=56.12 E-value=26 Score=28.63 Aligned_cols=54 Identities=11% Similarity=0.208 Sum_probs=34.9
Q ss_pred CCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccC
Q psy8836 18 QPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 18 cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~ 72 (118)
-|+ +.-++.|...|.|-+|+..+.+.+.++......+...+.|..--.++++..
T Consensus 241 tPd-s~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~ 294 (311)
T KOG1446|consen 241 TPD-SKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSAS 294 (311)
T ss_pred CCC-CcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecC
Confidence 476 777777777799999999999888777664233334444444334444433
No 144
>KOG2394|consensus
Probab=55.30 E-value=12 Score=32.95 Aligned_cols=36 Identities=17% Similarity=0.285 Sum_probs=30.3
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeE
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQI 47 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~ 47 (118)
..--+.|.|. -..+++||+.-+|.||.+...+++.+
T Consensus 334 GLLCvcWSPD-GKyIvtGGEDDLVtVwSf~erRVVAR 369 (636)
T KOG2394|consen 334 GLLCVCWSPD-GKYIVTGGEDDLVTVWSFEERRVVAR 369 (636)
T ss_pred ceEEEEEcCC-ccEEEecCCcceEEEEEeccceEEEe
Confidence 4445689996 99999999999999999988888754
No 145
>KOG1310|consensus
Probab=55.13 E-value=9.2 Score=34.00 Aligned_cols=37 Identities=19% Similarity=0.352 Sum_probs=33.7
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTT 41 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~ 41 (118)
|.+|...|+.|+-||..++.+..|++.|.+--||+..
T Consensus 143 ~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiRE 179 (758)
T KOG1310|consen 143 WSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIRE 179 (758)
T ss_pred hhhhhhhhhheecCCCCCceEEEecCCcceeeecccC
Confidence 6678889999999999889999999999999998754
No 146
>KOG2110|consensus
Probab=54.97 E-value=76 Score=26.76 Aligned_cols=93 Identities=15% Similarity=0.155 Sum_probs=54.0
Q ss_pred CCcccchhhhhCCCCCCeEEEEe--ecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCCC----CCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGY--SKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSKD----KEP 80 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg--~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~~----~~p 80 (118)
.||..+.+++.+++ +..|..=+ +.|.|+|||..+-+.+..+... -..+-.+..+.+|.+-.+.+.-|+. .+|
T Consensus 127 ~n~~gl~AlS~n~~-n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH-~~~lAalafs~~G~llATASeKGTVIRVf~v~ 204 (391)
T KOG2110|consen 127 PNPKGLCALSPNNA-NCYLAYPGSTTSGDVVLFDTINLQPVNTINAH-KGPLAALAFSPDGTLLATASEKGTVIRVFSVP 204 (391)
T ss_pred CCccceEeeccCCC-CceEEecCCCCCceEEEEEcccceeeeEEEec-CCceeEEEECCCCCEEEEeccCceEEEEEEcC
Confidence 46778888888876 66666544 3599999998888776554433 0224455567777775444422321 222
Q ss_pred ccccceeeCCCCCCeeeeeec
Q psy8836 81 SKALLKSVSPGFQPTCLVQLH 101 (118)
Q Consensus 81 ~k~~~~~~p~G~Q~~~v~q~~ 101 (118)
-......|-.|+-+--+.++.
T Consensus 205 ~G~kl~eFRRG~~~~~IySL~ 225 (391)
T KOG2110|consen 205 EGQKLYEFRRGTYPVSIYSLS 225 (391)
T ss_pred CccEeeeeeCCceeeEEEEEE
Confidence 222233333466565555554
No 147
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=54.27 E-value=14 Score=31.19 Aligned_cols=50 Identities=16% Similarity=0.282 Sum_probs=32.6
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLS 68 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~ 68 (118)
+++.|.- |+|+.....+.|.+||-.+.+++..+.+. . +..+.|...+.+.
T Consensus 110 ~~~~If~-----G~LL~~~~~~~i~~yDw~~~~~i~~i~v~--~-vk~V~Ws~~g~~v 159 (443)
T PF04053_consen 110 SVEKIFG-----GNLLGVKSSDFICFYDWETGKLIRRIDVS--A-VKYVIWSDDGELV 159 (443)
T ss_dssp -EEEEE------SSSEEEEETTEEEEE-TTT--EEEEESS---E--EEEEE-TTSSEE
T ss_pred ccceEEc-----CcEEEEECCCCEEEEEhhHcceeeEEecC--C-CcEEEEECCCCEE
Confidence 4555544 77888888889999999999998776655 3 5678899887765
No 148
>KOG1407|consensus
Probab=53.37 E-value=27 Score=28.35 Aligned_cols=59 Identities=17% Similarity=0.220 Sum_probs=43.7
Q ss_pred hhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 14 AIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 14 ~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
.|.|.|. -+++++|+....|...|..+.++....+.. .......|+....+|.-....|
T Consensus 111 ~i~wsp~-g~~~~~~~kdD~it~id~r~~~~~~~~~~~--~e~ne~~w~~~nd~Fflt~GlG 169 (313)
T KOG1407|consen 111 NITWSPD-GEYIAVGNKDDRITFIDARTYKIVNEEQFK--FEVNEISWNNSNDLFFLTNGLG 169 (313)
T ss_pred EEEEcCC-CCEEEEecCcccEEEEEecccceeehhccc--ceeeeeeecCCCCEEEEecCCc
Confidence 4778896 889999999999999999888887655555 4455567888777775444333
No 149
>KOG0291|consensus
Probab=53.06 E-value=22 Score=32.58 Aligned_cols=39 Identities=26% Similarity=0.321 Sum_probs=32.6
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEe
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIST 49 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~ 49 (118)
-.|.+-+.|+. ++.|++|+++|...||++..-..++.+.
T Consensus 266 ~kvtaa~fH~~-t~~lvvgFssG~f~LyelP~f~lih~LS 304 (893)
T KOG0291|consen 266 SKVTAAAFHKG-TNLLVVGFSSGEFGLYELPDFNLIHSLS 304 (893)
T ss_pred cceeeeeccCC-ceEEEEEecCCeeEEEecCCceEEEEee
Confidence 45778888998 9999999999999999887777765444
No 150
>KOG4547|consensus
Probab=52.35 E-value=19 Score=31.51 Aligned_cols=41 Identities=15% Similarity=0.104 Sum_probs=29.7
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEe
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIST 49 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~ 49 (118)
+..+-.+..|.--|. ..+|++|+ +++-+||.+++|++..|+
T Consensus 141 ~~~~~~~~sl~is~D-~~~l~~as--~~ik~~~~~~kevv~~ft 181 (541)
T KOG4547|consen 141 KEQKPLVSSLCISPD-GKILLTAS--RQIKVLDIETKEVVITFT 181 (541)
T ss_pred ccCCCccceEEEcCC-CCEEEecc--ceEEEEEccCceEEEEec
Confidence 334555666666665 77777764 699999999999987664
No 151
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=52.32 E-value=19 Score=29.93 Aligned_cols=38 Identities=21% Similarity=0.338 Sum_probs=30.5
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeE
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQI 47 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~ 47 (118)
+-|.|.++... |-|=++|||++|.++|.|+....++..
T Consensus 85 ~~g~vtal~~S--~iGFvaigy~~G~l~viD~RGPavI~~ 122 (395)
T PF08596_consen 85 KQGPVTALKNS--DIGFVAIGYESGSLVVIDLRGPAVIYN 122 (395)
T ss_dssp -S-SEEEEEE---BTSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred cCCcEeEEecC--CCcEEEEEecCCcEEEEECCCCeEEee
Confidence 34678888775 699999999999999999988888744
No 152
>KOG4640|consensus
Probab=52.17 E-value=19 Score=32.21 Aligned_cols=49 Identities=18% Similarity=0.343 Sum_probs=38.6
Q ss_pred cch-hhhhCCCCCCeEEEEeecceEEEEeCCCCceeeE--Eeecccccccccccc
Q psy8836 11 AVE-AIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQI--STMNIVSDRDSFVWK 62 (118)
Q Consensus 11 aV~-~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~--~~v~l~~~~es~~W~ 62 (118)
.|. .++|.|. -.-|.||+..|.|.|-|-.++..++- +.+. .++.+..|.
T Consensus 63 ~v~~sL~W~~D-GkllaVg~kdG~I~L~Dve~~~~l~~~~~s~e--~~is~~~w~ 114 (665)
T KOG4640|consen 63 NVTASLCWRPD-GKLLAVGFKDGTIRLHDVEKGGRLVSFLFSVE--TDISKGIWD 114 (665)
T ss_pred ccceeeeecCC-CCEEEEEecCCeEEEEEccCCCceeccccccc--cchheeecc
Confidence 444 8999996 78888999999999999888877755 3444 667777785
No 153
>PRK01742 tolB translocation protein TolB; Provisional
Probab=51.05 E-value=44 Score=27.40 Aligned_cols=58 Identities=9% Similarity=0.079 Sum_probs=36.9
Q ss_pred cccchhhhhCCCCCCeEEEEee---cceEEEEeCCCCceeeEEeeccccccccccccCCccccc
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGYS---KGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSV 69 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg~---~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~ 69 (118)
.+.|....|+|. .++|+.+.. ..+|.+||..+.+........ .....+.|..+++...
T Consensus 203 ~~~v~~p~wSPD-G~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~--g~~~~~~wSPDG~~La 263 (429)
T PRK01742 203 SQPLMSPAWSPD-GSKLAYVSFENKKSQLVVHDLRSGARKVVASFR--GHNGAPAFSPDGSRLA 263 (429)
T ss_pred CCccccceEcCC-CCEEEEEEecCCCcEEEEEeCCCCceEEEecCC--CccCceeECCCCCEEE
Confidence 457888999996 777765532 247999998876543222222 2234577888876443
No 154
>KOG1009|consensus
Probab=51.01 E-value=22 Score=30.27 Aligned_cols=63 Identities=17% Similarity=0.278 Sum_probs=48.1
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d 74 (118)
.-|--++|-|. ++-|..|...-.+.+||..+...+..+.-+ -....+++|.-+.+...+-++|
T Consensus 124 ~diydL~Ws~d-~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh-~~yvqgvawDpl~qyv~s~s~d 186 (434)
T KOG1009|consen 124 DDIYDLAWSPD-SNFLVSGSVDNSVRLWDVHAGQLLAILDDH-EHYVQGVAWDPLNQYVASKSSD 186 (434)
T ss_pred cchhhhhccCC-CceeeeeeccceEEEEEeccceeEeecccc-ccccceeecchhhhhhhhhccC
Confidence 35667899996 999999999999999999988877443211 0123478899999998887766
No 155
>KOG0315|consensus
Probab=50.85 E-value=17 Score=29.45 Aligned_cols=52 Identities=21% Similarity=0.272 Sum_probs=37.2
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGH 64 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~ 64 (118)
.-|.++.+.- |-+-+.-|++.|.|-|||+.+-+.-..+..+ ..+.++.=|.+
T Consensus 84 kNVtaVgF~~-dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~--spVn~vvlhpn 135 (311)
T KOG0315|consen 84 KNVTAVGFQC-DGRWMYTGSEDGTVKIWDLRSLSCQRNYQHN--SPVNTVVLHPN 135 (311)
T ss_pred CceEEEEEee-cCeEEEecCCCceEEEEeccCcccchhccCC--CCcceEEecCC
Confidence 4566777774 4899999999999999999886665445555 55665554443
No 156
>KOG0643|consensus
Probab=50.78 E-value=10 Score=30.91 Aligned_cols=36 Identities=22% Similarity=0.245 Sum_probs=30.3
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTT 41 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~ 41 (118)
+|.|.|+|..++.+|. ---.+-||+.|.|-|.-+..
T Consensus 283 vkGHFGPINsvAfhPd-GksYsSGGEDG~VR~h~Fd~ 318 (327)
T KOG0643|consen 283 VKGHFGPINSVAFHPD-GKSYSSGGEDGYVRLHHFDS 318 (327)
T ss_pred ccccccCcceeEECCC-CcccccCCCCceEEEEEecc
Confidence 6889999999999997 66678899999998875443
No 157
>KOG4714|consensus
Probab=50.56 E-value=19 Score=29.30 Aligned_cols=35 Identities=29% Similarity=0.527 Sum_probs=30.4
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTN 42 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~ 42 (118)
+.-+|..+.-+|..+..+|.|+..|.|-|||..+.
T Consensus 178 ~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~ 212 (319)
T KOG4714|consen 178 ALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNV 212 (319)
T ss_pred ccccchhhhCCcccccEEEEecCCCeEEEEEcccc
Confidence 33469999999999999999999999999987655
No 158
>KOG0319|consensus
Probab=49.75 E-value=15 Score=33.31 Aligned_cols=44 Identities=20% Similarity=0.315 Sum_probs=36.9
Q ss_pred CCCC-CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEE
Q psy8836 4 HYKL-NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIS 48 (118)
Q Consensus 4 ~y~~-~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~ 48 (118)
.+|. |-++|--++.+|. .+.|..||..|.|.+||.+.+-..++|
T Consensus 99 swKa~He~Pvi~ma~~~~-g~LlAtggaD~~v~VWdi~~~~~th~f 143 (775)
T KOG0319|consen 99 SWKAIHEAPVITMAFDPT-GTLLATGGADGRVKVWDIKNGYCTHSF 143 (775)
T ss_pred hHhhccCCCeEEEEEcCC-CceEEeccccceEEEEEeeCCEEEEEe
Confidence 3455 7788999999999 799999999999999999888776554
No 159
>KOG0279|consensus
Probab=49.47 E-value=41 Score=27.48 Aligned_cols=44 Identities=16% Similarity=0.184 Sum_probs=35.4
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEe
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIST 49 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~ 49 (118)
|+.|-.-|+.....+. +++.+-|+-.|.+-+||+.+.+..++|.
T Consensus 59 ~~GHsH~v~dv~~s~d-g~~alS~swD~~lrlWDl~~g~~t~~f~ 102 (315)
T KOG0279|consen 59 LTGHSHFVSDVVLSSD-GNFALSASWDGTLRLWDLATGESTRRFV 102 (315)
T ss_pred eeccceEecceEEccC-CceEEeccccceEEEEEecCCcEEEEEE
Confidence 4456667888888885 9999999999999999999876655554
No 160
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=49.29 E-value=14 Score=31.23 Aligned_cols=41 Identities=22% Similarity=0.122 Sum_probs=33.3
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEE
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIS 48 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~ 48 (118)
|..+.++.|+.+|. .+...+.=+-|-|.|+|..+..++.+|
T Consensus 305 D~~R~~~~i~~sP~-~~laA~tDslGRV~LiD~~~~~vvrmW 345 (415)
T PF14655_consen 305 DSKREGESICLSPS-GRLAAVTDSLGRVLLIDVARGIVVRMW 345 (415)
T ss_pred cCCceEEEEEECCC-CCEEEEEcCCCcEEEEECCCChhhhhh
Confidence 44678999999997 666666666699999999999998654
No 161
>KOG4378|consensus
Probab=48.97 E-value=74 Score=28.18 Aligned_cols=61 Identities=7% Similarity=0.074 Sum_probs=44.7
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~ 72 (118)
-+-.-|.+||.+.-.|+--|-.--|.+||..++....++..+ .++..+..-..|..-.-..
T Consensus 209 AP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y~--~Plstvaf~~~G~~L~aG~ 269 (673)
T KOG4378|consen 209 APCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTYS--HPLSTVAFSECGTYLCAGN 269 (673)
T ss_pred CCcCcceecCCccceEEEecccceEEEeecccccccceeeec--CCcceeeecCCceEEEeec
Confidence 345578999987777766677788999999988888887777 7777777655555544333
No 162
>KOG0290|consensus
Probab=48.56 E-value=20 Score=29.51 Aligned_cols=68 Identities=18% Similarity=0.216 Sum_probs=41.9
Q ss_pred CCcccchhhhhCCCC--CCeEEEEeecceEEEEeCCC--Cce--eeEEee----ccccccccccccCCc-ccccccCCC
Q psy8836 7 LNPGAVEAIAEQPGS--PNHIIVGYSKGLVVLWDRTT--NTA--NQISTM----NIVSDRDSFVWKGHA-RLSVKHTGD 74 (118)
Q Consensus 7 ~~p~aV~~I~~cP~d--s~~LlIgg~~G~VVl~d~~~--~~~--~~~~~v----~l~~~~es~~W~~~~-~~~~~~~~d 74 (118)
+||+++.+|.|.|.. .+-=++|.++-+.-||.... .++ ...+.- +.-..+.||.|..-+ ++-..++-|
T Consensus 94 d~~YP~tK~~wiPd~~g~~pdlLATs~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiD 172 (364)
T KOG0290|consen 94 DHPYPVTKLMWIPDSKGVYPDLLATSSDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSID 172 (364)
T ss_pred CCCCCccceEecCCccccCcchhhcccCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeeccc
Confidence 589999999999973 24457899999999994332 111 111110 011567899996544 444444444
No 163
>KOG0292|consensus
Probab=47.65 E-value=15 Score=34.50 Aligned_cols=64 Identities=19% Similarity=0.249 Sum_probs=50.6
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEe-eccccccccccccCCcccccccCCCCC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIST-MNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~-v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
-.|+.|++||. ---++++=-+|.|-+||-....-+++|. =+ -...++..|...++|++.+.|-+
T Consensus 10 sRvKglsFHP~-rPwILtslHsG~IQlWDYRM~tli~rFdeHd--GpVRgv~FH~~qplFVSGGDDyk 74 (1202)
T KOG0292|consen 10 SRVKGLSFHPK-RPWILTSLHSGVIQLWDYRMGTLIDRFDEHD--GPVRGVDFHPTQPLFVSGGDDYK 74 (1202)
T ss_pred ccccceecCCC-CCEEEEeecCceeeeehhhhhhHHhhhhccC--CccceeeecCCCCeEEecCCccE
Confidence 37899999998 7788999999999999987776655543 22 34567889999999999886633
No 164
>KOG0273|consensus
Probab=47.44 E-value=23 Score=30.72 Aligned_cols=62 Identities=15% Similarity=0.180 Sum_probs=50.0
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~ 72 (118)
|-.+|-+++..|. .+.|+-|...|-|-+|+-++.+.++.+.-+ .-+-.++|...|..-.-+-
T Consensus 451 H~~pVysvafS~~-g~ylAsGs~dg~V~iws~~~~~l~~s~~~~--~~Ifel~Wn~~G~kl~~~~ 512 (524)
T KOG0273|consen 451 HQEPVYSVAFSPN-GRYLASGSLDGCVHIWSTKTGKLVKSYQGT--GGIFELCWNAAGDKLGACA 512 (524)
T ss_pred CCCceEEEEecCC-CcEEEecCCCCeeEeccccchheeEeecCC--CeEEEEEEcCCCCEEEEEe
Confidence 4568889999997 999999999999999999999999877766 5567788987775443333
No 165
>KOG0973|consensus
Probab=46.54 E-value=29 Score=32.37 Aligned_cols=69 Identities=22% Similarity=0.352 Sum_probs=49.2
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCC------------CceeeEEe-eccc----cccccccccCCccccc
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTT------------NTANQIST-MNIV----SDRDSFVWKGHARLSV 69 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~------------~~~~~~~~-v~l~----~~~es~~W~~~~~~~~ 69 (118)
+|-++|.-+-|.|. ...|.+|+...+|.+|+... ...++.+. +-+. .|+-.+.|.-++.+.+
T Consensus 67 ~h~~sv~CVR~S~d-G~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lv 145 (942)
T KOG0973|consen 67 DHDGSVNCVRFSPD-GSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLV 145 (942)
T ss_pred cccCceeEEEECCC-CCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEE
Confidence 46789999999996 99999999999999995541 01111121 1111 5566788999999998
Q ss_pred ccCCCCC
Q psy8836 70 KHTGDSK 76 (118)
Q Consensus 70 ~~~~d~~ 76 (118)
+.+.|.+
T Consensus 146 S~s~Dns 152 (942)
T KOG0973|consen 146 SVSLDNS 152 (942)
T ss_pred Eecccce
Confidence 8887743
No 166
>KOG0646|consensus
Probab=46.46 E-value=7.3 Score=33.42 Aligned_cols=36 Identities=19% Similarity=0.376 Sum_probs=30.7
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeE
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQI 47 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~ 47 (118)
+|.-++.|- |-..|+.|.+.|.|-|||-.+++.+++
T Consensus 279 ~ITcLais~-DgtlLlSGd~dg~VcvWdi~S~Q~iRt 314 (476)
T KOG0646|consen 279 AITCLAIST-DGTLLLSGDEDGKVCVWDIYSKQCIRT 314 (476)
T ss_pred ceeEEEEec-CccEEEeeCCCCCEEEEecchHHHHHH
Confidence 888899996 488899999999999999988876643
No 167
>PF05660 DUF807: Coxiella burnetii protein of unknown function (DUF807); InterPro: IPR008525 This family consists of several proteins of unknown function from Coxiella burnetii (the causative agent of a zoonotic disease called Q fever).
Probab=45.96 E-value=40 Score=24.26 Aligned_cols=71 Identities=20% Similarity=0.351 Sum_probs=39.1
Q ss_pred CCCCCCCcccchhhhhCCCCCCeEEEEeecc-----------eEEEEeCCCCceeeEEeeccc----cccccccccCCcc
Q psy8836 2 PDHYKLNPGAVEAIAEQPGSPNHIIVGYSKG-----------LVVLWDRTTNTANQISTMNIV----SDRDSFVWKGHAR 66 (118)
Q Consensus 2 ~~~y~~~p~aV~~I~~cP~ds~~LlIgg~~G-----------~VVl~d~~~~~~~~~~~v~l~----~~~es~~W~~~~~ 66 (118)
||.|=.|||||..=.-.=.-+|+-.|-+.+. |+-++|+.++....++.-.+. -+-..|.||+--+
T Consensus 19 p~syfgn~gai~~p~I~k~aTGeytItfls~r~vqetQp~~vhi~v~d~~n~~fc~r~~K~v~Fty~Pens~fpwK~m~q 98 (142)
T PF05660_consen 19 PDSYFGNPGAIMDPEIEKIATGEYTITFLSARNVQETQPAVVHISVMDDANETFCPRVTKAVKFTYEPENSDFPWKGMLQ 98 (142)
T ss_pred chhccCCCccccChhhhhhccCceEEEEEeccchhhcCCceEEEEEEecccccccccceeeeEEEECCccCCCChhhhhh
Confidence 8899999999875443333367766665543 455556655543333222211 1112377887665
Q ss_pred cccccC
Q psy8836 67 LSVKHT 72 (118)
Q Consensus 67 ~~~~~~ 72 (118)
--+...
T Consensus 99 Iai~e~ 104 (142)
T PF05660_consen 99 IAITEG 104 (142)
T ss_pred heeecc
Confidence 555444
No 168
>KOG0263|consensus
Probab=45.64 E-value=28 Score=31.46 Aligned_cols=66 Identities=21% Similarity=0.303 Sum_probs=48.2
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
|..-|--++.||+ ++.+.-|+..-.|-+||-.+...+.+|... ...++++..-..|+.-.+...|+
T Consensus 534 hlsDV~cv~FHPN-s~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH-~~~V~al~~Sp~Gr~LaSg~ed~ 599 (707)
T KOG0263|consen 534 HLSDVDCVSFHPN-SNYVATGSSDRTVRLWDVSTGNSVRIFTGH-KGPVTALAFSPCGRYLASGDEDG 599 (707)
T ss_pred cccccceEEECCc-ccccccCCCCceEEEEEcCCCcEEEEecCC-CCceEEEEEcCCCceEeecccCC
Confidence 4445667899998 999999999999999999999998777543 23455555555555555555443
No 169
>KOG0277|consensus
Probab=45.15 E-value=25 Score=28.49 Aligned_cols=71 Identities=14% Similarity=0.139 Sum_probs=50.4
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccc-ccccccc-CCcccccccCCCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSD-RDSFVWK-GHARLSVKHTGDSKD 77 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~-~es~~W~-~~~~~~~~~~~d~~~ 77 (118)
||-|-.-|.++-|++.+.+.++.+.=.|.|-||+-.-...++.+... .. +-+..|+ +++.++.+.++|+..
T Consensus 100 ~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh--~~~Iy~a~~sp~~~nlfas~Sgd~~l 172 (311)
T KOG0277|consen 100 FKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGH--NSCIYQAAFSPHIPNLFASASGDGTL 172 (311)
T ss_pred HHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCC--ccEEEEEecCCCCCCeEEEccCCceE
Confidence 55677889999999998889999988899999987666555555433 22 2234565 456777777777643
No 170
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=43.15 E-value=51 Score=17.32 Aligned_cols=29 Identities=21% Similarity=0.165 Sum_probs=21.4
Q ss_pred CCeEEEEee-cceEEEEeCCCCceeeEEee
Q psy8836 22 PNHIIVGYS-KGLVVLWDRTTNTANQISTM 50 (118)
Q Consensus 22 s~~LlIgg~-~G~VVl~d~~~~~~~~~~~v 50 (118)
.++|.|+.. ++.|.++|..+.+.+..+.+
T Consensus 3 ~~~lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 3 GTKLYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 567787764 68899999988877655444
No 171
>KOG1036|consensus
Probab=42.41 E-value=28 Score=28.54 Aligned_cols=23 Identities=26% Similarity=0.411 Sum_probs=18.2
Q ss_pred CCeEEEEeecceEEEEeCCCCce
Q psy8836 22 PNHIIVGYSKGLVVLWDRTTNTA 44 (118)
Q Consensus 22 s~~LlIgg~~G~VVl~d~~~~~~ 44 (118)
.++|+||....+|.+||+.+.+.
T Consensus 145 g~~LvVg~~~r~v~iyDLRn~~~ 167 (323)
T KOG1036|consen 145 GNRLVVGTSDRKVLIYDLRNLDE 167 (323)
T ss_pred CCEEEEeecCceEEEEEcccccc
Confidence 67889999999999998766543
No 172
>PRK01742 tolB translocation protein TolB; Provisional
Probab=40.81 E-value=61 Score=26.59 Aligned_cols=57 Identities=14% Similarity=0.260 Sum_probs=36.6
Q ss_pred ccchhhhhCCCCCCeEEEEe-ecceEEEE--eCCCCceeeEEeeccccccccccccCCccccc
Q psy8836 10 GAVEAIAEQPGSPNHIIVGY-SKGLVVLW--DRTTNTANQISTMNIVSDRDSFVWKGHARLSV 69 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg-~~G~VVl~--d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~ 69 (118)
+....++|.|. .++|+++. ..|.+-|| |..+++..+...-+ ....++.|..+++...
T Consensus 248 g~~~~~~wSPD-G~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~--~~~~~~~wSpDG~~i~ 307 (429)
T PRK01742 248 GHNGAPAFSPD-GSRLAFASSKDGVLNIYVMGANGGTPSQLTSGA--GNNTEPSWSPDGQSIL 307 (429)
T ss_pred CccCceeECCC-CCEEEEEEecCCcEEEEEEECCCCCeEeeccCC--CCcCCEEECCCCCEEE
Confidence 44557889996 88888876 46766666 77666654332222 2345678988887543
No 173
>KOG1064|consensus
Probab=40.38 E-value=7.6 Score=38.83 Aligned_cols=44 Identities=23% Similarity=0.286 Sum_probs=37.5
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEee
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTM 50 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v 50 (118)
++|++.+..|+--|+ ...|+-||..|.|-|||....+..+++..
T Consensus 2333 ~~H~~gaT~l~~~P~-~qllisggr~G~v~l~D~rqrql~h~~~~ 2376 (2439)
T KOG1064|consen 2333 TCHDGGATVLAYAPK-HQLLISGGRKGEVCLFDIRQRQLRHTFQA 2376 (2439)
T ss_pred eecCCCceEEEEcCc-ceEEEecCCcCcEEEeehHHHHHHHHhhh
Confidence 468999999999998 88899999999999999988877665543
No 174
>PRK02889 tolB translocation protein TolB; Provisional
Probab=38.69 E-value=89 Score=25.65 Aligned_cols=58 Identities=14% Similarity=0.215 Sum_probs=37.5
Q ss_pred CcccchhhhhCCCCCCeEEEEe-ec--ceEEEEeCCCCceeeEEeeccccccccccccCCcccc
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGY-SK--GLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLS 68 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg-~~--G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~ 68 (118)
+.+.|...+|.|. .++|+... .+ .+|.+||..+.+........ ....++.|..+++..
T Consensus 194 ~~~~v~~p~wSPD-G~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~--g~~~~~~~SPDG~~l 254 (427)
T PRK02889 194 SPEPIISPAWSPD-GTKLAYVSFESKKPVVYVHDLATGRRRVVANFK--GSNSAPAWSPDGRTL 254 (427)
T ss_pred CCCCcccceEcCC-CCEEEEEEccCCCcEEEEEECCCCCEEEeecCC--CCccceEECCCCCEE
Confidence 4457788899996 77776654 33 46888899887664332222 233456788877644
No 175
>PF14157 YmzC: YmzC-like protein; PDB: 3KVP_E.
Probab=37.13 E-value=63 Score=20.42 Aligned_cols=24 Identities=29% Similarity=0.428 Sum_probs=20.0
Q ss_pred CCeEEEEeecceEEEE--eCCCCcee
Q psy8836 22 PNHIIVGYSKGLVVLW--DRTTNTAN 45 (118)
Q Consensus 22 s~~LlIgg~~G~VVl~--d~~~~~~~ 45 (118)
.+.+.|-+.+|+|-|| |+.++++.
T Consensus 29 ~N~Fav~~e~~~iKIfkyd~~tNei~ 54 (63)
T PF14157_consen 29 HNHFAVVDEDGQIKIFKYDEDTNEIT 54 (63)
T ss_dssp TTEEEEE-ETTEEEEEEEETTTTEEE
T ss_pred CCEEEEEecCCeEEEEEeCCCCCeEE
Confidence 6788888999999999 88888875
No 176
>KOG2139|consensus
Probab=36.92 E-value=14 Score=31.33 Aligned_cols=54 Identities=9% Similarity=0.158 Sum_probs=42.8
Q ss_pred chhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCccc
Q psy8836 12 VEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARL 67 (118)
Q Consensus 12 V~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~ 67 (118)
++-++||+. -.++.+|++.-.|-+||-+.+++. .+..+.+-+..+++|+.-...
T Consensus 101 lr~~aWhqH-~~~fava~nddvVriy~ksst~pt-~Lks~sQrnvtclawRPlsas 154 (445)
T KOG2139|consen 101 LRGVAWHQH-IIAFAVATNDDVVRIYDKSSTCPT-KLKSVSQRNVTCLAWRPLSAS 154 (445)
T ss_pred eeeEeechh-hhhhhhhccCcEEEEeccCCCCCc-eecchhhcceeEEEeccCCcc
Confidence 567899997 999999999999999988887664 556666667788888755443
No 177
>KOG0289|consensus
Probab=36.86 E-value=24 Score=30.44 Aligned_cols=37 Identities=22% Similarity=0.259 Sum_probs=29.9
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEE
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIS 48 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~ 48 (118)
.+..+++||. ...|--|-..|+|-+||+++...+..|
T Consensus 349 ~~ts~~fHpD-gLifgtgt~d~~vkiwdlks~~~~a~F 385 (506)
T KOG0289|consen 349 EYTSAAFHPD-GLIFGTGTPDGVVKIWDLKSQTNVAKF 385 (506)
T ss_pred eeEEeeEcCC-ceEEeccCCCceEEEEEcCCccccccC
Confidence 4778899996 888878888899999999887665444
No 178
>KOG0645|consensus
Probab=35.87 E-value=1.3e+02 Score=24.54 Aligned_cols=64 Identities=14% Similarity=0.229 Sum_probs=43.8
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCC-CCcee--eEEeeccccccccccccCCcccccccCCCCC
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRT-TNTAN--QISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~-~~~~~--~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
-|+.++|++. -+.|......--|=+|... ..|.. .+++ .=.||...+.||....+-.+.+.|.+
T Consensus 107 EVK~Vaws~s-G~~LATCSRDKSVWiWe~deddEfec~aVL~-~HtqDVK~V~WHPt~dlL~S~SYDnT 173 (312)
T KOG0645|consen 107 EVKCVAWSAS-GNYLATCSRDKSVWIWEIDEDDEFECIAVLQ-EHTQDVKHVIWHPTEDLLFSCSYDNT 173 (312)
T ss_pred ceeEEEEcCC-CCEEEEeeCCCeEEEEEecCCCcEEEEeeec-cccccccEEEEcCCcceeEEeccCCe
Confidence 7899999986 7777777778889999332 22221 1211 11278889999998887777776643
No 179
>PRK05137 tolB translocation protein TolB; Provisional
Probab=35.83 E-value=98 Score=25.32 Aligned_cols=57 Identities=14% Similarity=0.037 Sum_probs=37.4
Q ss_pred cccchhhhhCCCCCCeEEEEe-e--cceEEEEeCCCCceeeEEeeccccccccccccCCcccc
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGY-S--KGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLS 68 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg-~--~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~ 68 (118)
.+.|...+|.|. .++|+... . .++|.+||..+.+........ ....++.|..+|+..
T Consensus 201 ~~~v~~p~wSpD-G~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~--g~~~~~~~SPDG~~l 260 (435)
T PRK05137 201 SSLVLTPRFSPN-RQEITYMSYANGRPRVYLLDLETGQRELVGNFP--GMTFAPRFSPDGRKV 260 (435)
T ss_pred CCCeEeeEECCC-CCEEEEEEecCCCCEEEEEECCCCcEEEeecCC--CcccCcEECCCCCEE
Confidence 357788899996 66665543 2 368999999887764332222 344567898888754
No 180
>KOG2041|consensus
Probab=35.77 E-value=25 Score=32.51 Aligned_cols=27 Identities=19% Similarity=0.265 Sum_probs=24.0
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEE
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLW 37 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~ 37 (118)
--|..|+|+-+ -.|+||.|+.|-||+=
T Consensus 116 SvV~SmsWn~d-G~kIcIvYeDGavIVG 142 (1189)
T KOG2041|consen 116 SVVVSMSWNLD-GTKICIVYEDGAVIVG 142 (1189)
T ss_pred cEEEEEEEcCC-CcEEEEEEccCCEEEE
Confidence 46889999986 9999999999999875
No 181
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=35.76 E-value=45 Score=26.07 Aligned_cols=60 Identities=8% Similarity=0.211 Sum_probs=33.1
Q ss_pred chhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeecc--------ccccccccccCCcccccccC
Q psy8836 12 VEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNI--------VSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 12 V~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l--------~~~~es~~W~~~~~~~~~~~ 72 (118)
+-.|+-+|.+...++...++..++.+| .+.+++..+...- +.+-|+++....|.+.+.+.
T Consensus 173 ~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsE 240 (248)
T PF06977_consen 173 LSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSE 240 (248)
T ss_dssp --EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEET
T ss_pred ccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcC
Confidence 345667898444555566778888889 5556665555441 12467888888888877666
No 182
>KOG0281|consensus
Probab=35.04 E-value=22 Score=30.06 Aligned_cols=34 Identities=26% Similarity=0.391 Sum_probs=23.6
Q ss_pred CcccchhhhhCCCCCCeEEEEeec-ceEEEEeCCCCcee
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSK-GLVVLWDRTTNTAN 45 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~-G~VVl~d~~~~~~~ 45 (118)
|-|+|--++. -++++|.|++ ..|.+||-.+.+.+
T Consensus 236 HtGSVLCLqy----d~rviisGSSDsTvrvWDv~tge~l 270 (499)
T KOG0281|consen 236 HTGSVLCLQY----DERVIVSGSSDSTVRVWDVNTGEPL 270 (499)
T ss_pred CCCcEEeeec----cceEEEecCCCceEEEEeccCCchh
Confidence 5566654444 4457777766 89999998887664
No 183
>KOG4227|consensus
Probab=34.98 E-value=83 Score=27.19 Aligned_cols=56 Identities=20% Similarity=0.197 Sum_probs=38.5
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCC--ceeeEEeeccccccccccccCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTN--TANQISTMNIVSDRDSFVWKGH 64 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~--~~~~~~~v~l~~~~es~~W~~~ 64 (118)
+-|+|-++..+|. -++|++...+|.|.+||.... .+..++..|--....+...|..
T Consensus 148 ~~~~VY~m~~~P~-DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~ 205 (609)
T KOG4227|consen 148 NRGDVYHMDQHPT-DNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPE 205 (609)
T ss_pred cccceeecccCCC-CceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCC
Confidence 5679999999999 899999999999999975433 3333444552233444444433
No 184
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=34.91 E-value=49 Score=26.73 Aligned_cols=36 Identities=17% Similarity=0.232 Sum_probs=28.9
Q ss_pred Ccc-cchhhhhCCCCCCeEEEEeecceEEEEeCCCCce
Q psy8836 8 NPG-AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTA 44 (118)
Q Consensus 8 ~p~-aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~ 44 (118)
||. .=..++|.|. ...|..|..+|+|-+||+...+.
T Consensus 41 D~~PQWRkl~WSpD-~tlLa~a~S~G~i~vfdl~g~~l 77 (282)
T PF15492_consen 41 DPNPQWRKLAWSPD-CTLLAYAESTGTIRVFDLMGSEL 77 (282)
T ss_pred CCCchheEEEECCC-CcEEEEEcCCCeEEEEeccccee
Confidence 344 4467899996 99999999999999999876544
No 185
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=34.68 E-value=57 Score=27.56 Aligned_cols=37 Identities=22% Similarity=0.503 Sum_probs=30.8
Q ss_pred CCCCCCcccchhhhhCCCCCCeEEEEeecceEEEEeC
Q psy8836 3 DHYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDR 39 (118)
Q Consensus 3 ~~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~ 39 (118)
+.|..+.-+|-.+--.+.++.+++||.-+|++-||+-
T Consensus 18 e~~d~~~l~v~~~~~~~~~~d~IivGS~~G~LrIy~P 54 (418)
T PF14727_consen 18 EEFDQGSLCVGNLDNSPSGSDKIIVGSYSGILRIYDP 54 (418)
T ss_pred CcCcCceEEEEcccCCCCCccEEEEeccccEEEEEcc
Confidence 5566566688888877888999999999999999954
No 186
>PF12292 DUF3624: Protein of unknown function (DUF3624); InterPro: IPR022072 This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length. There is a conserved GRC sequence motif.
Probab=34.67 E-value=15 Score=24.10 Aligned_cols=13 Identities=31% Similarity=0.598 Sum_probs=11.3
Q ss_pred CCCCcccchhhhh
Q psy8836 5 YKLNPGAVEAIAE 17 (118)
Q Consensus 5 y~~~p~aV~~I~~ 17 (118)
|+++|.+|++|++
T Consensus 40 f~d~P~sieSIAL 52 (77)
T PF12292_consen 40 FRDTPTSIESIAL 52 (77)
T ss_pred HcCCcchHHHHHH
Confidence 7889999999975
No 187
>KOG1009|consensus
Probab=34.66 E-value=47 Score=28.33 Aligned_cols=32 Identities=25% Similarity=0.422 Sum_probs=28.6
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRT 40 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~ 40 (118)
|-+||.-+-++|+ -..|.-|+..|.|.||...
T Consensus 64 H~~aVN~vRf~p~-gelLASg~D~g~v~lWk~~ 95 (434)
T KOG1009|consen 64 HTRAVNVVRFSPD-GELLASGGDGGEVFLWKQG 95 (434)
T ss_pred CcceeEEEEEcCC-cCeeeecCCCceEEEEEec
Confidence 6679999999998 9999999999999999544
No 188
>KOG1240|consensus
Probab=34.49 E-value=55 Score=31.77 Aligned_cols=31 Identities=23% Similarity=0.396 Sum_probs=26.4
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRT 40 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~ 40 (118)
.+|..|+..++++.-++-|+..|.|-+||..
T Consensus 1049 ~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~ 1079 (1431)
T KOG1240|consen 1049 SAVIKLAVSSEHTSLFVSGSDDGTVKVWNLR 1079 (1431)
T ss_pred ccccceeecCCCCceEEEecCCceEEEeeeh
Confidence 4777888888877999999999999999753
No 189
>KOG0267|consensus
Probab=34.25 E-value=34 Score=31.21 Aligned_cols=45 Identities=20% Similarity=0.333 Sum_probs=37.3
Q ss_pred CCCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEe
Q psy8836 4 HYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIST 49 (118)
Q Consensus 4 ~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~ 49 (118)
-|+.|++.|.-|.+.|. -+.+..||+.-.|-+||....++..-|.
T Consensus 149 ~~~s~~~vv~~l~lsP~-Gr~v~~g~ed~tvki~d~~agk~~~ef~ 193 (825)
T KOG0267|consen 149 TYKSHTRVVDVLRLSPD-GRWVASGGEDNTVKIWDLTAGKLSKEFK 193 (825)
T ss_pred eecCCcceeEEEeecCC-CceeeccCCcceeeeecccccccccccc
Confidence 37789999999999997 8888889998999999987776664333
No 190
>PRK01029 tolB translocation protein TolB; Provisional
Probab=33.48 E-value=94 Score=25.75 Aligned_cols=56 Identities=18% Similarity=0.179 Sum_probs=37.7
Q ss_pred cchhhhhCCCCCCeEEEEeec---ceEEEEeCCCCceeeEEeeccccccccccccCCccccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSK---GLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSV 69 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~---G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~ 69 (118)
.+....|.|. .++|+..... .+|.+||..+.+........ ...+++.|..+++...
T Consensus 328 ~~~~p~wSPD-G~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~~--~~~~~p~wSpDG~~L~ 386 (428)
T PRK01029 328 NSSCPAWSPD-GKKIAFCSVIKGVRQICVYDLATGRDYQLTTSP--ENKESPSWAIDSLHLV 386 (428)
T ss_pred CccceeECCC-CCEEEEEEcCCCCcEEEEEECCCCCeEEccCCC--CCccceEECCCCCEEE
Confidence 4567789996 7777655432 47889999888775433222 3456788988887654
No 191
>PRK03629 tolB translocation protein TolB; Provisional
Probab=33.33 E-value=92 Score=25.66 Aligned_cols=58 Identities=17% Similarity=0.208 Sum_probs=37.8
Q ss_pred cccchhhhhCCCCCCeEEEEee-cc--eEEEEeCCCCceeeEEeeccccccccccccCCccccc
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGYS-KG--LVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSV 69 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg~-~G--~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~ 69 (118)
++.+....|.|. .++|+.... .| .|.+||..+.+..+..... ....++.|..+++...
T Consensus 242 ~~~~~~~~~SPD-G~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~--~~~~~~~wSPDG~~I~ 302 (429)
T PRK03629 242 PRHNGAPAFSPD-GSKLAFALSKTGSLNLYVMDLASGQIRQVTDGR--SNNTEPTWFPDSQNLA 302 (429)
T ss_pred CCCcCCeEECCC-CCEEEEEEcCCCCcEEEEEECCCCCEEEccCCC--CCcCceEECCCCCEEE
Confidence 344556789996 777776533 44 5778899887765443333 3345678988887553
No 192
>KOG0288|consensus
Probab=33.01 E-value=1.5e+02 Score=25.45 Aligned_cols=93 Identities=15% Similarity=0.128 Sum_probs=57.5
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeecccccccccccc-----CCcccccccCCCCCCCCCcccc
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWK-----GHARLSVKHTGDSKDKEPSKAL 84 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~-----~~~~~~~~~~~d~~~~~p~k~~ 84 (118)
|.|..+...+. -+.|+.-+-.-.+-+.|..+.++.+.+... .-..+-.|. ..+.+....++||+..
T Consensus 342 g~vtSl~ls~~-g~~lLsssRDdtl~viDlRt~eI~~~~sA~--g~k~asDwtrvvfSpd~~YvaAGS~dgsv~------ 412 (459)
T KOG0288|consen 342 GRVTSLDLSMD-GLELLSSSRDDTLKVIDLRTKEIRQTFSAE--GFKCASDWTRVVFSPDGSYVAAGSADGSVY------ 412 (459)
T ss_pred cceeeEeeccC-CeEEeeecCCCceeeeecccccEEEEeecc--ccccccccceeEECCCCceeeeccCCCcEE------
Confidence 58999999987 889999988899999999999998877655 222222232 2333333333333221
Q ss_pred ceee--CCCCCCeeeeeec-CChheeeeeeccc
Q psy8836 85 LKSV--SPGFQPTCLVQLH-PPAAVTSLVLHTE 114 (118)
Q Consensus 85 ~~~~--p~G~Q~~~v~q~~-Pp~~ITala~~s~ 114 (118)
.| --| .-+.+++.. -+++||+++-+++
T Consensus 413 --iW~v~tg-KlE~~l~~s~s~~aI~s~~W~~s 442 (459)
T KOG0288|consen 413 --IWSVFTG-KLEKVLSLSTSNAAITSLSWNPS 442 (459)
T ss_pred --EEEccCc-eEEEEeccCCCCcceEEEEEcCC
Confidence 11 111 233344443 4459999998864
No 193
>KOG1063|consensus
Probab=32.95 E-value=39 Score=30.70 Aligned_cols=31 Identities=45% Similarity=0.636 Sum_probs=26.3
Q ss_pred ccchhhhhCCCCCC----eEEEEeecceEEEEeCC
Q psy8836 10 GAVEAIAEQPGSPN----HIIVGYSKGLVVLWDRT 40 (118)
Q Consensus 10 ~aV~~I~~cP~ds~----~LlIgg~~G~VVl~d~~ 40 (118)
.||.+|+.+|-+-+ -+.||.++|-|+||...
T Consensus 665 ~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~ 699 (764)
T KOG1063|consen 665 LAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRK 699 (764)
T ss_pred CceeeEEeeccccccccceEEEEecccEEEEEecc
Confidence 49999999986655 77999999999999644
No 194
>KOG2394|consensus
Probab=32.83 E-value=31 Score=30.50 Aligned_cols=30 Identities=30% Similarity=0.493 Sum_probs=28.1
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDR 39 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~ 39 (118)
-+|..|.|=|.+.+++++++.+|...+||+
T Consensus 220 tsvT~ikWvpg~~~~Fl~a~~sGnlyly~~ 249 (636)
T KOG2394|consen 220 SSVTCIKWVPGSDSLFLVAHASGNLYLYDK 249 (636)
T ss_pred cceEEEEEEeCCCceEEEEEecCceEEeec
Confidence 478899999999999999999999999976
No 195
>KOG0306|consensus
Probab=32.81 E-value=53 Score=30.26 Aligned_cols=34 Identities=18% Similarity=0.288 Sum_probs=25.2
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCcee
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTAN 45 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~ 45 (118)
.|..+.-||+ --.|.|||..|-|-||+..++++.
T Consensus 67 evt~l~~~~d-~l~lAVGYaDGsVqif~~~s~~~~ 100 (888)
T KOG0306|consen 67 EVTCLRSSDD-ILLLAVGYADGSVQIFSLESEEIL 100 (888)
T ss_pred eEEEeeccCC-cceEEEEecCceEEeeccCCCcee
Confidence 4555555665 667799999999999988766443
No 196
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=32.59 E-value=1.3e+02 Score=23.14 Aligned_cols=54 Identities=9% Similarity=0.163 Sum_probs=32.1
Q ss_pred hhhhhCCCCCCeEEEEee-cceEEEEeCCCCc----eeeEEeeccccccccccccCCccccc
Q psy8836 13 EAIAEQPGSPNHIIVGYS-KGLVVLWDRTTNT----ANQISTMNIVSDRDSFVWKGHARLSV 69 (118)
Q Consensus 13 ~~I~~cP~ds~~LlIgg~-~G~VVl~d~~~~~----~~~~~~v~l~~~~es~~W~~~~~~~~ 69 (118)
..|..+|. .+.|.++.. ++.|.+|+..+.. .+..+... ..-..+.+..+++.-.
T Consensus 231 ~~i~~~pd-g~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~--~~p~~~~~~~dg~~l~ 289 (330)
T PRK11028 231 ADIHITPD-GRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTE--TQPRGFNIDHSGKYLI 289 (330)
T ss_pred eeEEECCC-CCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEecc--ccCCceEECCCCCEEE
Confidence 35778896 888888854 6899999764432 22222211 2234566666665544
No 197
>KOG0277|consensus
Probab=31.89 E-value=1e+02 Score=25.04 Aligned_cols=65 Identities=15% Similarity=0.171 Sum_probs=44.1
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeecccc-cccccccc-CCcccccccCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVS-DRDSFVWK-GHARLSVKHTGD 74 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~-~~es~~W~-~~~~~~~~~~~d 74 (118)
|-.-|=.-+++|.+.+-+.-+...|+.-+||......-..+++. + ++-+..|. -......+.+.|
T Consensus 146 h~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah--~~Eil~cdw~ky~~~vl~Tg~vd 212 (311)
T KOG0277|consen 146 HNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAH--NSEILCCDWSKYNHNVLATGGVD 212 (311)
T ss_pred CccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEec--cceeEeecccccCCcEEEecCCC
Confidence 33456677899999999999999999999987554333334444 3 45566784 445555666665
No 198
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=31.69 E-value=79 Score=16.93 Aligned_cols=20 Identities=25% Similarity=0.341 Sum_probs=14.5
Q ss_pred CCeEEEEeecceEEEEeCCC
Q psy8836 22 PNHIIVGYSKGLVVLWDRTT 41 (118)
Q Consensus 22 s~~LlIgg~~G~VVl~d~~~ 41 (118)
-++|.|+...|++.-+|.++
T Consensus 21 ~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 21 GGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp TSEEEEE-TTSEEEEEETT-
T ss_pred CCEEEEEcCCCEEEEEeCCC
Confidence 57888888899988887653
No 199
>PF01394 Clathrin_propel: Clathrin propeller repeat; InterPro: IPR022365 This entry represents the propeller repeat found in clathrin heavy chains. The N terminus of the heavy chain is known as the globular domain, and is composed of seven repeats which form a beta propeller []. Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. These vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transport []. Clathrin coats contain both clathrin (acts as a scaffold) and adaptor complexes that link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. The two major types of clathrin adaptor complexes are the heterotetrameric adaptor protein (AP) complexes, and the monomeric GGA (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) adaptors [, ]. Clathrin is a trimer composed of three heavy chains and three light chains, each monomer projecting outwards like a leg; this three-legged structure is known as a triskelion [, ]. The heavy chains form the legs, their N-terminal beta-propeller regions extending outwards, while their C-terminal alpha-alpha-superhelical regions form the central hub of the triskelion. Peptide motifs can bind between the beta-propeller blades. The light chains appear to have a regulatory role, and may help orient the assembly and disassembly of clathrin coats as they interact with hsc70 uncoating ATPase []. Clathrin triskelia self-polymerise into a curved lattice by twisting individual legs together. The clathrin lattice forms around a vesicle as it buds from the TGN, plasma membrane or endosomes, acting to stabilise the vesicle and facilitate the budding process []. The multiple blades created when the triskelia polymerise are involved in multiple protein interactions, enabling the recruitment of different cargo adaptors and membrane attachment proteins []. More information about these proteins can be found at Protein of the Month: Clathrin [].; PDB: 1UTC_B 3GD1_I 3GC3_B 1BPO_C 1C9I_B 1C9L_A 2XZG_A 2XZH_A.
Probab=31.27 E-value=66 Score=17.69 Aligned_cols=23 Identities=35% Similarity=0.498 Sum_probs=17.0
Q ss_pred hCCCCCCeEEEEee---cceEEEEeC
Q psy8836 17 EQPGSPNHIIVGYS---KGLVVLWDR 39 (118)
Q Consensus 17 ~cP~ds~~LlIgg~---~G~VVl~d~ 39 (118)
-+|+.+-+++||.. .|+|.+||.
T Consensus 11 ~~~~es~~~iigi~~~~~G~v~l~sv 36 (37)
T PF01394_consen 11 TAPMESWKFIIGISGRVKGQVQLYSV 36 (37)
T ss_dssp TECCCEEEEEEEEETCTEEEEEEEET
T ss_pred eCCCcCeEEEEEEEeeeeeEEEEEEC
Confidence 34666778888887 589998874
No 200
>KOG0306|consensus
Probab=30.55 E-value=53 Score=30.28 Aligned_cols=43 Identities=12% Similarity=0.073 Sum_probs=33.5
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEee
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTM 50 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v 50 (118)
.|-.||.-|...-. -..|+-|+-.|-||+||...++-.-++..
T Consensus 105 gHK~AVt~l~fd~~-G~rlaSGskDt~IIvwDlV~E~Gl~rL~G 147 (888)
T KOG0306|consen 105 GHKAAVTTLKFDKI-GTRLASGSKDTDIIVWDLVGEEGLFRLRG 147 (888)
T ss_pred ccccceEEEEEccc-CceEeecCCCccEEEEEeccceeeEEeec
Confidence 36678888888765 67777888889999999988877655554
No 201
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=29.62 E-value=78 Score=27.95 Aligned_cols=57 Identities=16% Similarity=0.292 Sum_probs=41.2
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEe-eccccc-cccccccCCcccc
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIST-MNIVSD-RDSFVWKGHARLS 68 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~-v~l~~~-~es~~W~~~~~~~ 68 (118)
+.|-|+++...|. --++++|..++++.++|..+..+- .+. .+ ++ +..|.||..++..
T Consensus 400 ~lg~I~av~vs~d-GK~~vvaNdr~el~vididngnv~-~idkS~--~~lItdf~~~~nsr~i 458 (668)
T COG4946 400 DLGNIEAVKVSPD-GKKVVVANDRFELWVIDIDNGNVR-LIDKSE--YGLITDFDWHPNSRWI 458 (668)
T ss_pred CccceEEEEEcCC-CcEEEEEcCceEEEEEEecCCCee-Eecccc--cceeEEEEEcCCceeE
Confidence 5678999999985 566999999999999998887663 111 11 22 2467899887765
No 202
>KOG3616|consensus
Probab=29.42 E-value=48 Score=31.14 Aligned_cols=60 Identities=20% Similarity=0.463 Sum_probs=40.5
Q ss_pred CCCCc---ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceee------------EE---eeccccccccccccCCc
Q psy8836 5 YKLNP---GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQ------------IS---TMNIVSDRDSFVWKGHA 65 (118)
Q Consensus 5 y~~~p---~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~------------~~---~v~l~~~~es~~W~~~~ 65 (118)
|+.+| .-+.+|+-+|. -.-++.|-..|.+++|++....-.. .. .+-++.|+.-+.|+.+|
T Consensus 7 ~s~~~k~~e~~~aiqshp~-~~s~v~~~~d~si~lfn~~~r~qski~~~~~p~~nlv~tnhgl~~~tsdrr~la~~~dg 84 (1636)
T KOG3616|consen 7 CSRDPKEDEFTTAIQSHPG-GQSFVLAHQDGSIILFNFIPRRQSKICEEAKPKENLVFTNHGLVTATSDRRALAWKEDG 84 (1636)
T ss_pred ccCCccccceeeeeeecCC-CceEEEEecCCcEEEEeecccchhhhhhhcCCccceeeeccceEEEeccchhheeeccC
Confidence 44454 36889999998 7788889999999999774432210 00 12223677778888777
No 203
>PRK04922 tolB translocation protein TolB; Provisional
Probab=28.91 E-value=1.5e+02 Score=24.20 Aligned_cols=57 Identities=9% Similarity=0.074 Sum_probs=35.2
Q ss_pred cccchhhhhCCCCCCeEEEEe-e--cceEEEEeCCCCceeeEEeeccccccccccccCCcccc
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGY-S--KGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLS 68 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg-~--~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~ 68 (118)
.+.|...+|.|. .++|+... . ..+|.+||..+.+.......+ ....++.|..+++..
T Consensus 203 ~~~v~~p~wSpD-g~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~--g~~~~~~~SpDG~~l 262 (433)
T PRK04922 203 AEPILSPAWSPD-GKKLAYVSFERGRSAIYVQDLATGQRELVASFR--GINGAPSFSPDGRRL 262 (433)
T ss_pred CCccccccCCCC-CCEEEEEecCCCCcEEEEEECCCCCEEEeccCC--CCccCceECCCCCEE
Confidence 346778899996 77666554 2 347888898777654332222 223356787777643
No 204
>KOG1538|consensus
Probab=28.52 E-value=89 Score=28.84 Aligned_cols=39 Identities=15% Similarity=0.207 Sum_probs=24.0
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCcee
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTAN 45 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~ 45 (118)
|.|-..|--+++.- |--.+.-|+..-.||+|.++-+..+
T Consensus 50 KgHKDtVycVAys~-dGkrFASG~aDK~VI~W~~klEG~L 88 (1081)
T KOG1538|consen 50 KGHKDTVYCVAYAK-DGKRFASGSADKSVIIWTSKLEGIL 88 (1081)
T ss_pred ccccceEEEEEEcc-CCceeccCCCceeEEEeccccccee
Confidence 33444555566653 3555666777789999976555443
No 205
>KOG0639|consensus
Probab=28.51 E-value=58 Score=28.88 Aligned_cols=36 Identities=25% Similarity=0.331 Sum_probs=27.7
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeE
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQI 47 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~ 47 (118)
|-.+++.+|. +.-..--+++|.|.|||+.++..+.-
T Consensus 511 aCyALa~spD-akvcFsccsdGnI~vwDLhnq~~Vrq 546 (705)
T KOG0639|consen 511 ACYALAISPD-AKVCFSCCSDGNIAVWDLHNQTLVRQ 546 (705)
T ss_pred hhhhhhcCCc-cceeeeeccCCcEEEEEcccceeeec
Confidence 5677888996 66555567789999999988877643
No 206
>KOG2139|consensus
Probab=28.35 E-value=45 Score=28.31 Aligned_cols=37 Identities=16% Similarity=0.466 Sum_probs=27.6
Q ss_pred Ccc--cchhhhhCCCCCCeEE-EEeecceEEEEeCCCCcee
Q psy8836 8 NPG--AVEAIAEQPGSPNHII-VGYSKGLVVLWDRTTNTAN 45 (118)
Q Consensus 8 ~p~--aV~~I~~cP~ds~~Ll-Igg~~G~VVl~d~~~~~~~ 45 (118)
||| .|..++|++. -..|+ -++.+..|.|||-.++.-+
T Consensus 192 ~pgh~pVtsmqwn~d-gt~l~tAS~gsssi~iWdpdtg~~~ 231 (445)
T KOG2139|consen 192 DPGHNPVTSMQWNED-GTILVTASFGSSSIMIWDPDTGQKI 231 (445)
T ss_pred CCCCceeeEEEEcCC-CCEEeecccCcceEEEEcCCCCCcc
Confidence 455 8999999986 44444 4578899999987776544
No 207
>KOG2106|consensus
Probab=28.00 E-value=1e+02 Score=27.28 Aligned_cols=54 Identities=19% Similarity=0.201 Sum_probs=0.0
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLS 68 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~ 68 (118)
+++....+| +|.|.+|...|+-++.|-.+...++.-.-+ +++.-+....+|.++
T Consensus 409 ~~~~~~fhp--sg~va~Gt~~G~w~V~d~e~~~lv~~~~d~--~~ls~v~ysp~G~~l 462 (626)
T KOG2106|consen 409 PAECADFHP--SGVVAVGTATGRWFVLDTETQDLVTIHTDN--EQLSVVRYSPDGAFL 462 (626)
T ss_pred ceeEeeccC--cceEEEeeccceEEEEecccceeEEEEecC--CceEEEEEcCCCCEE
No 208
>KOG1332|consensus
Probab=27.95 E-value=66 Score=26.02 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=23.0
Q ss_pred CCcccchhhhhCCCC-C--CeEEEEeecceEEEEe
Q psy8836 7 LNPGAVEAIAEQPGS-P--NHIIVGYSKGLVVLWD 38 (118)
Q Consensus 7 ~~p~aV~~I~~cP~d-s--~~LlIgg~~G~VVl~d 38 (118)
.|-.=|.-.+|||.. - .+|.-++..|.||||.
T Consensus 205 ~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt 239 (299)
T KOG1332|consen 205 GHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWT 239 (299)
T ss_pred hcchhhhhhhhccccCCCceeeEEecCCCcEEEEE
Confidence 355568889999984 2 3455556679999993
No 209
>PF06200 tify: tify domain; InterPro: IPR010399 The tify domain is a 36-amino acid domain only found among Embryophyta (land plants). It has been named after the most conserved amino acid pattern (TIF[F/Y]XG) it contains, but was previously known as the Zim domain. As the use of uppercase characters (TIFY) might imply that the domain is fully conserved across proteins, a lowercase lettering has been chosen in an attempt to highlight the reality of its natural variability. Based on the domain architecture, tify domain containing proteins can be classified into two groups. Group I is formed by proteins possessing a CCT (CONSTANS, CO-like, and TOC1) domain and a GATA-type zinc finger in addition to the tify domain. Group II contains proteins characterised by the tify domain but lacking a GATA-type zinc finger. Tify domain containing proteins might be involved in developmental processes and some of them have features that are characteristic for transcription factors: a nuclear localisation and the presence of a putative DNA-binding domain []. Some proteins known to contain a tify domain include: Arabidopsis thaliana Zinc-finger protein expressed in Inflorescence Meristem (ZIM), a putative transcription factor involved in inflorescence and flower development [, ]. A. thaliana ZIM-like proteins (ZML) []. A. thaliana PEAPOD1 and PEAPOD2 (PPD1 and PPD2) [].
Probab=27.91 E-value=1e+02 Score=17.22 Aligned_cols=19 Identities=26% Similarity=0.576 Sum_probs=14.8
Q ss_pred CCCCCeEEEEeecceEEEEeC
Q psy8836 19 PGSPNHIIVGYSKGLVVLWDR 39 (118)
Q Consensus 19 P~ds~~LlIgg~~G~VVl~d~ 39 (118)
|+ +.+|.|-| .|+|.+||.
T Consensus 3 ~~-~~qLTIfY-~G~V~Vfd~ 21 (36)
T PF06200_consen 3 PE-TAQLTIFY-GGQVCVFDD 21 (36)
T ss_pred CC-CCcEEEEE-CCEEEEeCC
Confidence 44 78888877 589999974
No 210
>KOG1063|consensus
Probab=27.88 E-value=68 Score=29.21 Aligned_cols=43 Identities=23% Similarity=0.399 Sum_probs=30.5
Q ss_pred CcccchhhhhCCCCCC---eEEEEeecceEEEEeCCCCceeeEEeec
Q psy8836 8 NPGAVEAIAEQPGSPN---HIIVGYSKGLVVLWDRTTNTANQISTMN 51 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~---~LlIgg~~G~VVl~d~~~~~~~~~~~v~ 51 (118)
|-.+|.-+.+=|. +. -|+.|++.|+|++|.+..+.......++
T Consensus 53 H~a~VnC~~~l~~-s~~~a~~vsG~sD~~v~lW~l~~~~~~~i~~~~ 98 (764)
T KOG1063|consen 53 HVARVNCVHWLPT-SEIVAEMVSGDSDGRVILWKLRDEYLIKIYTIQ 98 (764)
T ss_pred CccceEEEEEccc-ccccceEEEccCCCcEEEEEEeehheEEEEeec
Confidence 5567887888776 44 6999999999999977744444333333
No 211
>KOG4547|consensus
Probab=27.33 E-value=75 Score=27.95 Aligned_cols=41 Identities=17% Similarity=-0.010 Sum_probs=35.5
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEE
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIS 48 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~ 48 (118)
.|++.|..|.++-+ .+-|--+|..++|+.|++....+...+
T Consensus 100 ~h~~~v~~~~~~~~-~~ciyS~~ad~~v~~~~~~~~~~~~~~ 140 (541)
T KOG4547|consen 100 KHYGNVNEILDAQR-LGCIYSVGADLKVVYILEKEKVIIRIW 140 (541)
T ss_pred CCCCcceeeecccc-cCceEecCCceeEEEEecccceeeeee
Confidence 37899999999976 999999999999999999888776443
No 212
>KOG0272|consensus
Probab=27.31 E-value=68 Score=27.55 Aligned_cols=66 Identities=18% Similarity=0.161 Sum_probs=51.8
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
|-..|-.|+++|. -.-++-||-...=-|||+.+..-+-++... ..++-++.|...|-+-.++++|.
T Consensus 302 Hs~~v~~iaf~~D-GSL~~tGGlD~~~RvWDlRtgr~im~L~gH-~k~I~~V~fsPNGy~lATgs~Dn 367 (459)
T KOG0272|consen 302 HSKGVFSIAFQPD-GSLAATGGLDSLGRVWDLRTGRCIMFLAGH-IKEILSVAFSPNGYHLATGSSDN 367 (459)
T ss_pred cccccceeEecCC-CceeeccCccchhheeecccCcEEEEeccc-ccceeeEeECCCceEEeecCCCC
Confidence 4457888999996 888899999999999999999776444443 24566788998888887777664
No 213
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=27.30 E-value=2e+02 Score=22.78 Aligned_cols=55 Identities=7% Similarity=0.024 Sum_probs=34.2
Q ss_pred cchhhhhCCCCCCeEEEEeec---ceEEEEeCCCCceeeEEeeccccccccccccCCcccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSK---GLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLS 68 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~---G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~ 68 (118)
.+-...|.|. .++|+.+... ..|.+||..+++.......+ ....++.|..+++..
T Consensus 191 ~~~~p~~Spd-g~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~--~~~~~~~~spDg~~l 248 (417)
T TIGR02800 191 PILSPAWSPD-GQKLAYVSFESGKPEIYVQDLATGQREKVASFP--GMNGAPAFSPDGSKL 248 (417)
T ss_pred ceecccCCCC-CCEEEEEEcCCCCcEEEEEECCCCCEEEeecCC--CCccceEECCCCCEE
Confidence 4666778886 6666655433 47889998877654332222 334456787777644
No 214
>PF08149 BING4CT: BING4CT (NUC141) domain; InterPro: IPR012952 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This C-terminal domain is found in the BING4 family of nucleolar WD40 repeat proteins [].
Probab=26.89 E-value=31 Score=22.79 Aligned_cols=26 Identities=31% Similarity=0.328 Sum_probs=22.6
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEE
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLW 37 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~ 37 (118)
.|+.+.+||- ...|.||-.+|.=-+-
T Consensus 11 ~v~~~~F~Pf-EDvLgvGh~~G~sSii 36 (80)
T PF08149_consen 11 PVESLRFCPF-EDVLGVGHSKGFSSII 36 (80)
T ss_pred eeeeeEEech-HHeeEeeccCceeEEe
Confidence 8999999998 9999999999974443
No 215
>KOG1524|consensus
Probab=26.83 E-value=42 Score=29.92 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=30.7
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDR 39 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~ 39 (118)
||.|-|-|-.++|+|. |+.++-||+.=-.-+||-
T Consensus 182 WkAHDGiiL~~~W~~~-s~lI~sgGED~kfKvWD~ 215 (737)
T KOG1524|consen 182 WRAHDGLVLSLSWSTQ-SNIIASGGEDFRFKIWDA 215 (737)
T ss_pred EeccCcEEEEeecCcc-ccceeecCCceeEEeecc
Confidence 5667788999999998 999999999999999975
No 216
>KOG3881|consensus
Probab=26.70 E-value=80 Score=26.81 Aligned_cols=63 Identities=16% Similarity=0.130 Sum_probs=44.3
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCC
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d 74 (118)
+|.++.+-|. -+.+++|-..|++-.||..+....-+..-.+.-.+.++.=|...++-.+.+.|
T Consensus 249 ~is~~~l~p~-gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLD 311 (412)
T KOG3881|consen 249 PISSTGLTPS-GNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLD 311 (412)
T ss_pred cceeeeecCC-CcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccc
Confidence 6788888997 88899999999999999999987655333333334455445554555555544
No 217
>KOG0283|consensus
Probab=26.64 E-value=84 Score=28.59 Aligned_cols=70 Identities=13% Similarity=0.148 Sum_probs=54.1
Q ss_pred CCCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeecccccccccccc-CCcccccccCCCCCC
Q psy8836 4 HYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWK-GHARLSVKHTGDSKD 77 (118)
Q Consensus 4 ~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~-~~~~~~~~~~~d~~~ 77 (118)
.|+.|-+-|=-|+|. + ++-||=+...-.|-||+...++-+.+|.=+ .=..++..+ -+++.|++..-|+|.
T Consensus 364 ef~GHt~DILDlSWS-K-n~fLLSSSMDKTVRLWh~~~~~CL~~F~Hn--dfVTcVaFnPvDDryFiSGSLD~Kv 434 (712)
T KOG0283|consen 364 EFKGHTADILDLSWS-K-NNFLLSSSMDKTVRLWHPGRKECLKVFSHN--DFVTCVAFNPVDDRYFISGSLDGKV 434 (712)
T ss_pred hhhccchhheecccc-c-CCeeEeccccccEEeecCCCcceeeEEecC--CeeEEEEecccCCCcEeecccccce
Confidence 366788899999998 4 899999999999999999888777766644 334555554 456788888888875
No 218
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=26.62 E-value=1.2e+02 Score=24.69 Aligned_cols=37 Identities=24% Similarity=0.288 Sum_probs=24.5
Q ss_pred hhhhhCCCCCCeEEEE-eecceEEEEeCCCCceeeEEee
Q psy8836 13 EAIAEQPGSPNHIIVG-YSKGLVVLWDRTTNTANQISTM 50 (118)
Q Consensus 13 ~~I~~cP~ds~~LlIg-g~~G~VVl~d~~~~~~~~~~~v 50 (118)
..|+..|. .+.+++| +..+.|+++|..+.+.++.+..
T Consensus 81 ~~i~~s~D-G~~~~v~n~~~~~v~v~D~~tle~v~~I~~ 118 (369)
T PF02239_consen 81 RGIAVSPD-GKYVYVANYEPGTVSVIDAETLEPVKTIPT 118 (369)
T ss_dssp EEEEE--T-TTEEEEEEEETTEEEEEETTT--EEEEEE-
T ss_pred ceEEEcCC-CCEEEEEecCCCceeEeccccccceeeccc
Confidence 34566665 7788877 4789999999999988876543
No 219
>PRK05137 tolB translocation protein TolB; Provisional
Probab=26.46 E-value=1.5e+02 Score=24.26 Aligned_cols=59 Identities=15% Similarity=0.126 Sum_probs=35.9
Q ss_pred CcccchhhhhCCCCCCeEEEEee-c--ceEEEEeCCCCceeeEEeeccccccccccccCCccccc
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYS-K--GLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSV 69 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~-~--G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~ 69 (118)
.++.+...+|.|. .++|++... . .+|-+||..+.+..+..... ....++.|..+++...
T Consensus 244 ~~g~~~~~~~SPD-G~~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~--~~~~~~~~spDG~~i~ 305 (435)
T PRK05137 244 FPGMTFAPRFSPD-GRKVVMSLSQGGNTDIYTMDLRSGTTTRLTDSP--AIDTSPSYSPDGSQIV 305 (435)
T ss_pred CCCcccCcEECCC-CCEEEEEEecCCCceEEEEECCCCceEEccCCC--CccCceeEcCCCCEEE
Confidence 4566778889996 777766543 3 45667788877664332221 2233567877776543
No 220
>KOG0308|consensus
Probab=25.53 E-value=94 Score=28.19 Aligned_cols=43 Identities=14% Similarity=0.263 Sum_probs=34.2
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeec
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMN 51 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~ 51 (118)
|-.-|..|-.++. .++++-|++.|.|-|||+...+-+..+.+.
T Consensus 212 HTdNVr~ll~~dD-Gt~~ls~sSDgtIrlWdLgqQrCl~T~~vH 254 (735)
T KOG0308|consen 212 HTDNVRVLLVNDD-GTRLLSASSDGTIRLWDLGQQRCLATYIVH 254 (735)
T ss_pred cccceEEEEEcCC-CCeEeecCCCceEEeeeccccceeeeEEec
Confidence 4446777777875 999999999999999999888776665555
No 221
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=25.09 E-value=1.4e+02 Score=24.81 Aligned_cols=56 Identities=18% Similarity=0.186 Sum_probs=36.6
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEE--eCCCCceeeEEeeccccccccccccCCcccc
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLW--DRTTNTANQISTMNIVSDRDSFVWKGHARLS 68 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~--d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~ 68 (118)
+++.+|+..|. -+.|+.-..+|.+.+. |+.+ ....+..+.......+.|-|++...
T Consensus 217 ~~i~~iavSpn-g~~iAl~t~~g~l~v~ssDf~~--~~~e~~~~~~~~p~~~~WCG~dav~ 274 (410)
T PF04841_consen 217 GPIIKIAVSPN-GKFIALFTDSGNLWVVSSDFSE--KLCEFDTDSKSPPKQMAWCGNDAVV 274 (410)
T ss_pred CCeEEEEECCC-CCEEEEEECCCCEEEEECcccc--eeEEeecCcCCCCcEEEEECCCcEE
Confidence 68999999997 7777777777998777 4543 2222233322444577788876543
No 222
>KOG1645|consensus
Probab=24.70 E-value=69 Score=27.48 Aligned_cols=44 Identities=18% Similarity=0.145 Sum_probs=31.8
Q ss_pred hhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccc
Q psy8836 14 AIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSF 59 (118)
Q Consensus 14 ~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~ 59 (118)
+|-.-++++-.+++|+.+-.+++||..+.++++.+..+ +.+-.+
T Consensus 393 ai~~~~~nn~iv~~gd~tn~lil~D~~s~evvQ~l~~~--epv~Di 436 (463)
T KOG1645|consen 393 AIRAVEDNNYIVVVGDSTNELILQDPHSFEVVQTLALS--EPVLDI 436 (463)
T ss_pred ceeccccccEEEEecCCcceeEEeccchhheeeecccC--cceeec
Confidence 34444454455566778899999999999999998888 444434
No 223
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=24.68 E-value=1.7e+02 Score=20.95 Aligned_cols=29 Identities=14% Similarity=0.048 Sum_probs=23.4
Q ss_pred CCCeEEEEeecceEEEEeCCCCceeeEEe
Q psy8836 21 SPNHIIVGYSKGLVVLWDRTTNTANQIST 49 (118)
Q Consensus 21 ds~~LlIgg~~G~VVl~d~~~~~~~~~~~ 49 (118)
+.++++++...|.++.||..+.+.+-.+.
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~ 63 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFD 63 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEee
Confidence 47889999899999999998888764333
No 224
>PRK04922 tolB translocation protein TolB; Provisional
Probab=24.47 E-value=1.5e+02 Score=24.19 Aligned_cols=58 Identities=10% Similarity=0.138 Sum_probs=35.9
Q ss_pred cccchhhhhCCCCCCeEEEEe-ecc--eEEEEeCCCCceeeEEeeccccccccccccCCccccc
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGY-SKG--LVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSV 69 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg-~~G--~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~ 69 (118)
++.....+|.|. .++|++.. ..| .|-+||..+++..+..... ....++.|..+++...
T Consensus 247 ~g~~~~~~~SpD-G~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~~~--~~~~~~~~spDG~~l~ 307 (433)
T PRK04922 247 RGINGAPSFSPD-GRRLALTLSRDGNPEIYVMDLGSRQLTRLTNHF--GIDTEPTWAPDGKSIY 307 (433)
T ss_pred CCCccCceECCC-CCEEEEEEeCCCCceEEEEECCCCCeEECccCC--CCccceEECCCCCEEE
Confidence 344456788996 77776553 334 6888899888765432211 1224577888887554
No 225
>PF13619 KTSC: KTSC domain
Probab=24.23 E-value=85 Score=18.81 Aligned_cols=32 Identities=13% Similarity=0.244 Sum_probs=25.8
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCc
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNT 43 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~ 43 (118)
+|.+|.-+++ ++.|-|.+.+|.+-.|.....+
T Consensus 5 ~I~~v~Yd~~-~~~L~V~F~~G~~Y~Y~~Vp~~ 36 (60)
T PF13619_consen 5 NIRSVGYDPE-TRTLEVEFKSGSVYRYFGVPPE 36 (60)
T ss_pred cccEEeECCC-CCEEEEEEcCCCEEEECCCCHH
Confidence 6788888998 9999999999998777544443
No 226
>KOG2111|consensus
Probab=23.98 E-value=77 Score=26.27 Aligned_cols=31 Identities=19% Similarity=0.335 Sum_probs=27.7
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDR 39 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~ 39 (118)
|+-.|..|+.+|. +..|+|+...|.|-+|.+
T Consensus 225 d~A~iy~iaFSp~-~s~LavsSdKgTlHiF~l 255 (346)
T KOG2111|consen 225 DRADIYCIAFSPN-SSWLAVSSDKGTLHIFSL 255 (346)
T ss_pred chheEEEEEeCCC-ccEEEEEcCCCeEEEEEe
Confidence 5668899999997 999999999999999944
No 227
>KOG0276|consensus
Probab=23.87 E-value=1.1e+02 Score=27.73 Aligned_cols=42 Identities=19% Similarity=0.321 Sum_probs=34.1
Q ss_pred cccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeec
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMN 51 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~ 51 (118)
-..|+.|.+||. .--++-+==+|+|-|||-.+...+..+++.
T Consensus 13 SdRVKsVd~HPt-ePw~la~LynG~V~IWnyetqtmVksfeV~ 54 (794)
T KOG0276|consen 13 SDRVKSVDFHPT-EPWILAALYNGDVQIWNYETQTMVKSFEVS 54 (794)
T ss_pred CCceeeeecCCC-CceEEEeeecCeeEEEecccceeeeeeeec
Confidence 348999999998 667777778899999998888777666554
No 228
>PF02611 CDH: CDP-diacylglycerol pyrophosphatase; InterPro: IPR003763 The CDP-diacylglycerol pyrophosphatases 3.6.1.26 from EC play a role in the regulation of phospholipid metabolism by inositol, as well as regulating the cellular levels of phosphatidylinositol [].; GO: 0008715 CDP-diacylglycerol diphosphatase activity, 0008654 phospholipid biosynthetic process, 0016020 membrane; PDB: 2POF_A.
Probab=23.72 E-value=45 Score=25.94 Aligned_cols=14 Identities=29% Similarity=0.643 Sum_probs=10.6
Q ss_pred Chheeeeeeccccc
Q psy8836 103 PAAVTSLVLHTEWG 116 (118)
Q Consensus 103 p~~ITala~~s~~g 116 (118)
|...-+|||||.||
T Consensus 91 pd~~lsLaINS~~g 104 (222)
T PF02611_consen 91 PDDDLSLAINSQYG 104 (222)
T ss_dssp -GGGEEEEEB-GGG
T ss_pred CccceEEEecCccC
Confidence 56778999999998
No 229
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=23.68 E-value=76 Score=26.83 Aligned_cols=19 Identities=32% Similarity=0.401 Sum_probs=16.9
Q ss_pred CCCeEEEEeecceEEEEeC
Q psy8836 21 SPNHIIVGYSKGLVVLWDR 39 (118)
Q Consensus 21 ds~~LlIgg~~G~VVl~d~ 39 (118)
|..-++||+++|+|.+|.+
T Consensus 78 dw~~I~VG~ssG~vrfyte 96 (415)
T PF14655_consen 78 DWTCIAVGTSSGYVRFYTE 96 (415)
T ss_pred CcEEEEEEecccEEEEEec
Confidence 4788999999999999965
No 230
>KOG0308|consensus
Probab=23.01 E-value=2.6e+02 Score=25.55 Aligned_cols=95 Identities=13% Similarity=0.086 Sum_probs=51.6
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCCCCCCccccceeeCC
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSKDKEPSKALLKSVSP 90 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~~~~p~k~~~~~~p~ 90 (118)
+|=+++.|+. .-.++=||+-+-+.+||-.+.+-+-.+... ...+.-+.-..+|..-.+.++||..+ -|.-
T Consensus 173 siYSLA~N~t-~t~ivsGgtek~lr~wDprt~~kimkLrGH-TdNVr~ll~~dDGt~~ls~sSDgtIr--------lWdL 242 (735)
T KOG0308|consen 173 SIYSLAMNQT-GTIIVSGGTEKDLRLWDPRTCKKIMKLRGH-TDNVRVLLVNDDGTRLLSASSDGTIR--------LWDL 242 (735)
T ss_pred ceeeeecCCc-ceEEEecCcccceEEeccccccceeeeecc-ccceEEEEEcCCCCeEeecCCCceEE--------eeec
Confidence 7778889986 666666777899999998777543221111 00011112344566667777776443 2344
Q ss_pred CCCCeeeeeecCChheeeeeecccc
Q psy8836 91 GFQPTCLVQLHPPAAVTSLVLHTEW 115 (118)
Q Consensus 91 G~Q~~~v~q~~Pp~~ITala~~s~~ 115 (118)
|-|=.+----++=..|-||+.++++
T Consensus 243 gqQrCl~T~~vH~e~VWaL~~~~sf 267 (735)
T KOG0308|consen 243 GQQRCLATYIVHKEGVWALQSSPSF 267 (735)
T ss_pred cccceeeeEEeccCceEEEeeCCCc
Confidence 4333222111244456666665543
No 231
>PRK03629 tolB translocation protein TolB; Provisional
Probab=22.95 E-value=1.7e+02 Score=24.11 Aligned_cols=57 Identities=9% Similarity=0.161 Sum_probs=35.3
Q ss_pred cccchhhhhCCCCCCeEEEE-ee--cceEEEEeCCCCceeeEEeeccccccccccccCCcccc
Q psy8836 9 PGAVEAIAEQPGSPNHIIVG-YS--KGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLS 68 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIg-g~--~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~ 68 (118)
.+.+....|.|. .++|+.. +. ..++.+||..+.+........ ....++.|..+++.-
T Consensus 198 ~~~~~~p~wSPD-G~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~--~~~~~~~~SPDG~~L 257 (429)
T PRK03629 198 PQPLMSPAWSPD-GSKLAYVTFESGRSALVIQTLANGAVRQVASFP--RHNGAPAFSPDGSKL 257 (429)
T ss_pred CCceeeeEEcCC-CCEEEEEEecCCCcEEEEEECCCCCeEEccCCC--CCcCCeEECCCCCEE
Confidence 346778999997 6666643 32 347888888777654332222 333456788777644
No 232
>KOG1409|consensus
Probab=22.74 E-value=68 Score=27.01 Aligned_cols=34 Identities=21% Similarity=0.352 Sum_probs=29.9
Q ss_pred CCCCCCcccchhhhhCCCCCCeEEEEeecceEEEE
Q psy8836 3 DHYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLW 37 (118)
Q Consensus 3 ~~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~ 37 (118)
+=|-..|-++..++-.++ +++|+||...|.|.-|
T Consensus 62 sI~~~mP~~~~~~~y~~e-~~~L~vg~~ngtvtef 95 (404)
T KOG1409|consen 62 SIYHYMPSPCSAMEYVSE-SRRLYVGQDNGTVTEF 95 (404)
T ss_pred hhhhhCCCCceEeeeecc-ceEEEEEEecceEEEE
Confidence 344457889999999998 9999999999999988
No 233
>KOG0316|consensus
Probab=22.60 E-value=77 Score=25.58 Aligned_cols=40 Identities=15% Similarity=0.254 Sum_probs=33.8
Q ss_pred CCCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCce
Q psy8836 4 HYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTA 44 (118)
Q Consensus 4 ~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~ 44 (118)
-|+.|-+.|..+..|-+ |..++-|+-.-.|-+||=.+...
T Consensus 96 r~rgH~aqVNtV~fNee-sSVv~SgsfD~s~r~wDCRS~s~ 135 (307)
T KOG0316|consen 96 RFRGHLAQVNTVRFNEE-SSVVASGSFDSSVRLWDCRSRSF 135 (307)
T ss_pred ecccccceeeEEEecCc-ceEEEeccccceeEEEEcccCCC
Confidence 36789999999999976 99999999999999997655533
No 234
>KOG3630|consensus
Probab=21.60 E-value=58 Score=31.46 Aligned_cols=54 Identities=15% Similarity=0.264 Sum_probs=35.8
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCC--ceeeEEee--ccccccccccccCCccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTN--TANQISTM--NIVSDRDSFVWKGHARL 67 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~--~~~~~~~v--~l~~~~es~~W~~~~~~ 67 (118)
++.++.|.|+ .-+|.||.+.|.++-|...-+ ..+..-.+ + ..+++++|-+.-.+
T Consensus 200 ~~Tav~WSpr-GKQl~iG~nnGt~vQy~P~leik~~ip~Pp~~e~--yrvl~v~Wl~t~ef 257 (1405)
T KOG3630|consen 200 SQTAVLWSPR-GKQLFIGRNNGTEVQYEPSLEIKSEIPEPPVEEN--YRVLSVTWLSTQEF 257 (1405)
T ss_pred ceeeEEeccc-cceeeEecCCCeEEEeecccceeecccCCCcCCC--cceeEEEEecceeE
Confidence 6778999999 999999999999999943322 11111111 2 33567778655443
No 235
>KOG2467|consensus
Probab=21.52 E-value=67 Score=27.49 Aligned_cols=23 Identities=17% Similarity=0.280 Sum_probs=19.3
Q ss_pred CeEEEEeecceEEEEeCCCCcee
Q psy8836 23 NHIIVGYSKGLVVLWDRTTNTAN 45 (118)
Q Consensus 23 ~~LlIgg~~G~VVl~d~~~~~~~ 45 (118)
=+|+-||+.-|+||||+....+.
T Consensus 342 y~lvtgGTDnHlvLvDLr~~G~d 364 (477)
T KOG2467|consen 342 YKLVTGGTDNHLVLVDLRPKGVD 364 (477)
T ss_pred ceEecCCccceEEEEeccccCCc
Confidence 37899999999999999777553
No 236
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=21.43 E-value=2.6e+02 Score=22.13 Aligned_cols=55 Identities=13% Similarity=0.166 Sum_probs=31.9
Q ss_pred chhhhhCCCCCCeEEEEeec-c--eEEEEeCCCCceeeEEeeccccccccccccCCccccc
Q psy8836 12 VEAIAEQPGSPNHIIVGYSK-G--LVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSV 69 (118)
Q Consensus 12 V~~I~~cP~ds~~LlIgg~~-G--~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~ 69 (118)
....++.|. .++|+....+ | +|-+||..+.+......-. ....++.|..+++...
T Consensus 280 ~~~~~~s~d-g~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~~~--~~~~~~~~spdg~~i~ 337 (417)
T TIGR02800 280 DTEPSWSPD-GKSIAFTSDRGGSPQIYMMDADGGEVRRLTFRG--GYNASPSWSPDGDLIA 337 (417)
T ss_pred CCCEEECCC-CCEEEEEECCCCCceEEEEECCCCCEEEeecCC--CCccCeEECCCCCEEE
Confidence 335567774 7777776554 3 6777788777654322222 2234566776666543
No 237
>KOG2041|consensus
Probab=21.24 E-value=94 Score=28.96 Aligned_cols=60 Identities=13% Similarity=0.170 Sum_probs=38.7
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeC-------CCCc--eeeEEeecccccccc-------ccccCCcccccccC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDR-------TTNT--ANQISTMNIVSDRDS-------FVWKGHARLSVKHT 72 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~-------~~~~--~~~~~~v~l~~~~es-------~~W~~~~~~~~~~~ 72 (118)
...+-++||-+ +|.+..||+.|..-+-.+ .... +..-+.+| |.+|+ +.|....+--.++.
T Consensus 15 vkL~c~~WNke-~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmN--QtLeGH~~sV~vvTWNe~~QKLTtSD 90 (1189)
T KOG2041|consen 15 VKLHCAEWNKE-SGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMN--QTLEGHNASVMVVTWNENNQKLTTSD 90 (1189)
T ss_pred ceEEEEEEccc-CCeEEeccccceeEEEEccccCCcccccccccccccchh--hhhccCcceEEEEEeccccccccccC
Confidence 34567899987 999999999999998833 2222 33445566 77764 35754433333333
No 238
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=20.28 E-value=69 Score=24.85 Aligned_cols=33 Identities=24% Similarity=0.282 Sum_probs=25.7
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCce
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTA 44 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~ 44 (118)
.++..|+=||. +|.|+||..+ -++||.++.+..
T Consensus 135 ~~p~ciaCC~~-tG~LlVg~~~-~l~lf~l~~~~~ 167 (215)
T PF14761_consen 135 EPPLCIACCPV-TGNLLVGCGN-KLVLFTLKYQTI 167 (215)
T ss_pred CCCCEEEecCC-CCCEEEEcCC-EEEEEEEEEEEE
Confidence 37788999999 9999998765 677887655544
Done!