Query psy8836
Match_columns 118
No_of_seqs 129 out of 172
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 20:24:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8836.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8836hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zwl_B Eukaryotic translation 97.4 0.00033 1.1E-08 51.4 6.6 69 5-75 28-96 (369)
2 3mmy_A MRNA export factor; mRN 97.4 0.0006 2.1E-08 49.9 7.4 70 5-75 35-108 (368)
3 1gxr_A ESG1, transducin-like e 97.3 0.0007 2.4E-08 49.1 7.4 67 6-75 180-246 (337)
4 3lrv_A PRE-mRNA-splicing facto 97.2 0.001 3.5E-08 49.9 7.5 67 9-76 125-193 (343)
5 1k8k_C P40, ARP2/3 complex 41 97.2 0.00033 1.1E-08 51.9 4.4 73 2-76 1-75 (372)
6 3k26_A Polycomb protein EED; W 97.1 0.00041 1.4E-08 50.9 4.3 71 6-76 112-184 (366)
7 3odt_A Protein DOA1; ubiquitin 97.1 0.0009 3.1E-08 48.1 6.0 69 5-76 14-82 (313)
8 4e54_B DNA damage-binding prot 97.1 0.00048 1.6E-08 53.6 4.8 67 10-76 120-188 (435)
9 1got_B GT-beta; complex (GTP-b 97.1 0.00058 2E-08 51.5 5.1 70 5-76 180-249 (340)
10 4aow_A Guanine nucleotide-bind 97.1 0.00043 1.5E-08 50.6 4.2 70 6-75 35-108 (340)
11 3mmy_A MRNA export factor; mRN 97.1 0.00044 1.5E-08 50.7 4.3 67 6-75 83-151 (368)
12 2oit_A Nucleoporin 214KDA; NH2 97.1 0.00058 2E-08 54.4 5.2 69 7-76 147-215 (434)
13 2pm9_A Protein WEB1, protein t 97.1 0.0019 6.6E-08 48.5 7.7 69 7-75 163-237 (416)
14 3f3f_A Nucleoporin SEH1; struc 97.1 0.0022 7.6E-08 46.0 7.7 69 6-76 8-82 (351)
15 1got_B GT-beta; complex (GTP-b 97.1 0.0016 5.5E-08 49.0 7.0 70 5-75 222-292 (340)
16 1k8k_C P40, ARP2/3 complex 41 97.0 0.0009 3.1E-08 49.5 5.5 69 6-75 49-118 (372)
17 3dwl_C Actin-related protein 2 97.0 0.00053 1.8E-08 51.4 4.2 70 5-76 51-123 (377)
18 2ynn_A Coatomer subunit beta'; 97.0 0.00092 3.1E-08 49.6 5.4 69 5-75 9-77 (304)
19 3mkq_A Coatomer beta'-subunit; 97.0 0.0006 2E-08 56.2 4.5 69 5-75 9-77 (814)
20 4aez_A CDC20, WD repeat-contai 97.0 0.0023 7.9E-08 49.0 7.4 63 6-70 214-276 (401)
21 3jrp_A Fusion protein of prote 97.0 0.0016 5.3E-08 48.0 6.1 70 7-76 145-232 (379)
22 4aow_A Guanine nucleotide-bind 97.0 0.001 3.5E-08 48.6 5.0 61 6-69 212-272 (340)
23 4ery_A WD repeat-containing pr 96.9 0.0028 9.7E-08 46.4 7.4 69 6-76 62-130 (312)
24 4a11_B DNA excision repair pro 96.9 0.0043 1.5E-07 46.1 8.2 67 7-75 97-166 (408)
25 4aez_A CDC20, WD repeat-contai 96.9 0.0016 5.3E-08 50.0 5.9 63 7-71 257-321 (401)
26 3iz6_a 40S ribosomal protein R 96.9 0.0027 9.1E-08 48.6 7.2 71 5-76 245-321 (380)
27 3vl1_A 26S proteasome regulato 96.9 0.0026 8.7E-08 48.1 6.9 68 8-76 246-314 (420)
28 2oaj_A Protein SNI1; WD40 repe 96.9 0.00064 2.2E-08 59.1 3.9 70 6-76 148-234 (902)
29 3ow8_A WD repeat-containing pr 96.9 0.0021 7.2E-08 48.4 6.3 69 6-76 203-271 (321)
30 3zwl_B Eukaryotic translation 96.9 0.0014 4.7E-08 48.0 5.1 66 6-74 71-136 (369)
31 3jrp_A Fusion protein of prote 96.9 0.00084 2.9E-08 49.5 3.8 70 5-76 7-80 (379)
32 2aq5_A Coronin-1A; WD40 repeat 96.8 0.0022 7.6E-08 48.9 6.3 65 6-71 173-238 (402)
33 3fm0_A Protein CIAO1; WDR39,SG 96.8 0.005 1.7E-07 46.5 8.1 68 7-76 59-128 (345)
34 4a11_B DNA excision repair pro 96.8 0.0011 3.9E-08 49.3 4.0 70 6-75 40-122 (408)
35 3vu4_A KMHSV2; beta-propeller 96.8 0.0015 5.3E-08 49.7 4.8 71 5-76 191-263 (355)
36 3vl1_A 26S proteasome regulato 96.8 0.0018 6.2E-08 49.0 5.2 70 5-76 135-204 (420)
37 2pm9_A Protein WEB1, protein t 96.8 0.0031 1.1E-07 47.4 6.4 69 7-76 260-329 (416)
38 1gxr_A ESG1, transducin-like e 96.8 0.0021 7.2E-08 46.5 5.3 66 7-75 263-328 (337)
39 4g56_B MGC81050 protein; prote 96.7 0.0029 9.9E-08 48.3 6.1 66 8-75 138-204 (357)
40 4h5i_A Guanine nucleotide-exch 96.7 0.0013 4.6E-08 50.4 4.0 69 8-78 268-337 (365)
41 3fm0_A Protein CIAO1; WDR39,SG 96.7 0.0034 1.2E-07 47.4 6.2 70 6-76 102-173 (345)
42 1pgu_A Actin interacting prote 96.7 0.0025 8.5E-08 50.3 5.5 71 5-76 484-564 (615)
43 4g56_B MGC81050 protein; prote 96.7 0.0015 5.1E-08 49.9 4.1 69 6-76 266-335 (357)
44 3i2n_A WD repeat-containing pr 96.7 0.0016 5.4E-08 47.7 4.0 69 8-76 208-283 (357)
45 2aq5_A Coronin-1A; WD40 repeat 96.7 0.0015 5E-08 49.9 4.0 69 7-75 129-198 (402)
46 4e54_B DNA damage-binding prot 96.6 0.0033 1.1E-07 48.9 5.6 69 7-75 162-231 (435)
47 2xyi_A Probable histone-bindin 96.6 0.0048 1.6E-07 47.9 6.5 70 5-75 227-300 (430)
48 1sq9_A Antiviral protein SKI8; 96.6 0.0045 1.6E-07 46.3 6.1 64 7-74 184-254 (397)
49 4gqb_B Methylosome protein 50; 96.5 0.0049 1.7E-07 47.2 6.3 67 8-76 126-193 (344)
50 3k26_A Polycomb protein EED; W 96.5 0.0068 2.3E-07 44.3 6.7 68 8-76 68-139 (366)
51 3dwl_C Actin-related protein 2 96.5 0.0022 7.5E-08 47.9 4.1 66 8-76 145-228 (377)
52 3iz6_a 40S ribosomal protein R 96.5 0.0045 1.6E-07 47.3 6.0 69 5-75 62-130 (380)
53 2xyi_A Probable histone-bindin 96.5 0.004 1.4E-07 48.4 5.6 69 7-76 179-255 (430)
54 2ynn_A Coatomer subunit beta'; 96.5 0.0087 3E-07 44.2 7.2 71 5-75 136-208 (304)
55 3frx_A Guanine nucleotide-bind 96.5 0.0037 1.3E-07 46.7 5.0 65 5-72 192-256 (319)
56 3ei3_B DNA damage-binding prot 96.5 0.0049 1.7E-07 46.3 5.7 64 9-75 163-227 (383)
57 1vyh_C Platelet-activating fac 96.4 0.0025 8.6E-08 49.5 4.1 69 7-77 106-174 (410)
58 4gga_A P55CDC, cell division c 96.4 0.011 3.7E-07 45.6 7.5 64 7-72 274-339 (420)
59 1r5m_A SIR4-interacting protei 96.4 0.0075 2.6E-07 44.9 6.2 67 8-75 44-130 (425)
60 3ei3_B DNA damage-binding prot 96.4 0.0035 1.2E-07 47.1 4.4 69 6-76 201-274 (383)
61 3f3f_A Nucleoporin SEH1; struc 96.3 0.0017 5.8E-08 46.6 2.5 69 6-75 54-134 (351)
62 4ery_A WD repeat-containing pr 96.3 0.0043 1.5E-07 45.4 4.7 68 7-75 147-214 (312)
63 3frx_A Guanine nucleotide-bind 96.3 0.0045 1.5E-07 46.2 4.9 70 5-76 61-130 (319)
64 3ow8_A WD repeat-containing pr 96.3 0.0044 1.5E-07 46.6 4.7 68 6-75 245-312 (321)
65 2pbi_B Guanine nucleotide-bind 96.3 0.012 4.2E-07 44.6 7.3 71 5-76 236-307 (354)
66 1yfq_A Cell cycle arrest prote 96.3 0.0025 8.5E-08 46.6 3.1 67 7-76 9-80 (342)
67 1erj_A Transcriptional repress 96.3 0.0056 1.9E-07 47.0 5.3 67 6-75 162-229 (393)
68 2hes_X YDR267CP; beta-propelle 96.3 0.013 4.5E-07 43.8 7.1 67 8-76 57-130 (330)
69 3i2n_A WD repeat-containing pr 96.3 0.004 1.4E-07 45.5 4.1 70 6-76 15-91 (357)
70 1sq9_A Antiviral protein SKI8; 96.3 0.0051 1.7E-07 46.0 4.8 41 8-49 290-330 (397)
71 1pgu_A Actin interacting prote 96.3 0.015 5E-07 45.8 7.6 70 6-76 157-230 (615)
72 4gqb_B Methylosome protein 50; 96.2 0.0033 1.1E-07 48.2 3.7 69 6-76 254-323 (344)
73 2vdu_B TRNA (guanine-N(7)-)-me 96.2 0.017 5.8E-07 44.9 7.8 41 7-49 239-279 (450)
74 2xzm_R RACK1; ribosome, transl 96.1 0.0081 2.8E-07 45.0 5.3 69 6-76 73-141 (343)
75 2ymu_A WD-40 repeat protein; u 96.1 0.012 4E-07 46.5 6.4 67 6-75 54-120 (577)
76 3odt_A Protein DOA1; ubiquitin 96.1 0.0069 2.4E-07 43.4 4.6 67 6-76 222-288 (313)
77 1yfq_A Cell cycle arrest prote 96.0 0.0025 8.7E-08 46.6 2.0 54 8-65 100-162 (342)
78 3dw8_B Serine/threonine-protei 96.0 0.006 2E-07 46.4 4.1 66 5-72 222-304 (447)
79 3mkq_A Coatomer beta'-subunit; 96.0 0.0049 1.7E-07 50.8 3.8 67 7-75 53-119 (814)
80 1erj_A Transcriptional repress 96.0 0.024 8.2E-07 43.4 7.5 63 11-75 125-187 (393)
81 2pbi_B Guanine nucleotide-bind 95.9 0.011 3.9E-07 44.8 5.4 68 6-75 61-128 (354)
82 3gre_A Serine/threonine-protei 95.8 0.0049 1.7E-07 47.1 3.0 71 6-76 60-134 (437)
83 2pm7_B Protein transport prote 95.8 0.018 6.1E-07 42.3 6.0 69 6-75 50-123 (297)
84 3jro_A Fusion protein of prote 95.8 0.013 4.3E-07 49.4 5.6 71 6-76 50-124 (753)
85 1vyh_C Platelet-activating fac 95.8 0.015 5.2E-07 45.0 5.7 70 5-76 188-257 (410)
86 2vdu_B TRNA (guanine-N(7)-)-me 95.8 0.013 4.6E-07 45.5 5.2 65 10-75 103-171 (450)
87 1r5m_A SIR4-interacting protei 95.7 0.011 3.7E-07 44.0 4.3 66 8-76 107-172 (425)
88 3jro_A Fusion protein of prote 95.6 0.012 4.1E-07 49.6 4.9 71 5-77 5-79 (753)
89 2pm7_B Protein transport prote 95.6 0.028 9.6E-07 41.2 6.3 69 6-76 6-78 (297)
90 2oaj_A Protein SNI1; WD40 repe 95.5 0.019 6.6E-07 49.8 5.9 94 8-114 16-109 (902)
91 3dm0_A Maltose-binding peripla 95.5 0.015 5.3E-07 47.9 5.0 68 7-76 428-495 (694)
92 2ymu_A WD-40 repeat protein; u 95.4 0.015 5.1E-07 45.9 4.5 67 6-75 505-571 (577)
93 2xzm_R RACK1; ribosome, transl 95.4 0.016 5.5E-07 43.4 4.4 62 6-70 210-272 (343)
94 2hes_X YDR267CP; beta-propelle 95.3 0.016 5.3E-07 43.4 4.1 69 6-76 104-176 (330)
95 3lrv_A PRE-mRNA-splicing facto 95.3 0.014 4.9E-07 43.5 3.7 63 9-72 170-233 (343)
96 3gre_A Serine/threonine-protei 95.2 0.015 5.1E-07 44.4 3.7 67 8-75 213-283 (437)
97 3dw8_B Serine/threonine-protei 95.1 0.024 8E-07 43.0 4.6 63 10-76 286-365 (447)
98 3bg1_A Protein SEC13 homolog; 95.1 0.023 7.9E-07 42.2 4.3 71 5-75 53-127 (316)
99 3bg1_A Protein SEC13 homolog; 95.0 0.031 1.1E-06 41.5 4.9 71 5-76 208-285 (316)
100 4ggc_A P55CDC, cell division c 95.0 0.027 9.1E-07 40.5 4.3 66 8-75 239-306 (318)
101 1nr0_A Actin interacting prote 94.9 0.021 7.2E-07 46.6 4.0 69 6-75 187-261 (611)
102 4ggc_A P55CDC, cell division c 94.8 0.04 1.4E-06 39.5 4.9 40 8-48 66-105 (318)
103 4h5i_A Guanine nucleotide-exch 94.8 0.083 2.8E-06 40.3 6.9 61 11-74 135-197 (365)
104 3v7d_B Cell division control p 94.7 0.03 1E-06 43.0 4.2 68 5-75 158-227 (464)
105 1p22_A F-BOX/WD-repeat protein 94.7 0.1 3.6E-06 40.1 7.3 64 6-75 170-233 (435)
106 3dm0_A Maltose-binding peripla 94.6 0.02 7E-07 47.1 3.2 63 6-71 558-620 (694)
107 4gq1_A NUP37; propeller, trans 94.4 0.015 5.3E-07 44.7 1.9 69 5-75 132-209 (393)
108 3sfz_A APAF-1, apoptotic pepti 94.1 0.048 1.6E-06 47.4 4.6 67 7-75 613-679 (1249)
109 3sfz_A APAF-1, apoptotic pepti 94.0 0.082 2.8E-06 45.9 5.9 61 6-69 1000-1060(1249)
110 1nr0_A Actin interacting prote 93.8 0.076 2.6E-06 43.3 5.0 71 5-76 143-213 (611)
111 1l0q_A Surface layer protein; 93.8 0.1 3.5E-06 38.8 5.4 62 10-74 74-137 (391)
112 4gga_A P55CDC, cell division c 93.8 0.065 2.2E-06 41.2 4.3 39 8-47 146-184 (420)
113 2oit_A Nucleoporin 214KDA; NH2 93.6 0.051 1.8E-06 43.0 3.7 67 9-76 92-173 (434)
114 3v7d_B Cell division control p 93.6 0.12 4E-06 39.7 5.6 66 7-76 308-373 (464)
115 2ovr_B FBW7, F-BOX/WD repeat p 93.6 0.078 2.7E-06 40.7 4.5 65 8-75 361-429 (445)
116 2j04_A TAU60, YPL007P, hypothe 93.1 0.072 2.5E-06 45.3 3.9 61 11-74 131-201 (588)
117 2j04_B YDR362CP, TAU91; beta p 93.1 0.13 4.4E-06 42.1 5.3 99 7-114 306-408 (524)
118 1l0q_A Surface layer protein; 92.5 0.22 7.6E-06 37.0 5.5 63 10-75 200-266 (391)
119 2ojh_A Uncharacterized protein 92.4 0.13 4.4E-06 35.9 3.9 63 8-72 40-103 (297)
120 1ri6_A Putative isomerase YBHE 92.2 0.37 1.3E-05 34.6 6.3 60 8-68 36-98 (343)
121 4gq1_A NUP37; propeller, trans 92.1 0.059 2E-06 41.4 1.9 37 8-44 185-221 (393)
122 1p22_A F-BOX/WD-repeat protein 92.0 0.52 1.8E-05 36.1 7.2 61 10-76 134-194 (435)
123 2ovr_B FBW7, F-BOX/WD repeat p 90.9 0.21 7.1E-06 38.3 3.9 63 8-75 318-382 (445)
124 3bws_A Protein LP49; two-domai 90.6 0.43 1.5E-05 35.9 5.3 59 10-71 345-418 (433)
125 1jmx_B Amine dehydrogenase; ox 90.3 0.51 1.8E-05 34.0 5.4 58 11-72 256-313 (349)
126 3bws_A Protein LP49; two-domai 89.6 0.3 1E-05 36.8 3.8 58 9-69 302-360 (433)
127 2ojh_A Uncharacterized protein 89.5 0.88 3E-05 31.5 5.9 64 8-72 215-290 (297)
128 1pby_B Quinohemoprotein amine 89.1 0.86 2.9E-05 32.5 5.8 54 11-67 83-148 (337)
129 1pby_B Quinohemoprotein amine 87.7 1 3.5E-05 32.1 5.4 55 11-70 242-296 (337)
130 3vu4_A KMHSV2; beta-propeller 87.7 0.41 1.4E-05 36.0 3.3 34 8-42 239-272 (355)
131 2hqs_A Protein TOLB; TOLB, PAL 87.1 0.75 2.6E-05 35.6 4.6 59 8-69 177-238 (415)
132 2j04_A TAU60, YPL007P, hypothe 86.6 0.47 1.6E-05 40.3 3.4 63 10-76 86-152 (588)
133 1ri6_A Putative isomerase YBHE 86.5 0.69 2.4E-05 33.2 3.9 55 10-67 84-142 (343)
134 1jmx_B Amine dehydrogenase; ox 85.6 1.3 4.3E-05 31.9 4.9 39 11-50 296-334 (349)
135 2j04_B YDR362CP, TAU91; beta p 85.2 1 3.4E-05 36.8 4.7 63 11-75 357-419 (524)
136 3vgz_A Uncharacterized protein 84.6 1.8 6.1E-05 31.2 5.4 59 11-72 42-108 (353)
137 3u4y_A Uncharacterized protein 84.5 1.4 4.9E-05 31.7 4.8 55 15-72 89-147 (331)
138 3vgz_A Uncharacterized protein 82.4 2.4 8.1E-05 30.6 5.2 55 11-68 142-199 (353)
139 3u4y_A Uncharacterized protein 81.5 2.5 8.7E-05 30.3 5.1 58 11-71 177-239 (331)
140 2w18_A PALB2, fancn, partner a 78.4 3.3 0.00011 33.0 5.2 50 26-75 298-348 (356)
141 2oiz_A Aromatic amine dehydrog 78.1 3.1 0.00011 31.5 4.9 53 13-69 257-320 (361)
142 1k32_A Tricorn protease; prote 77.8 3.1 0.0001 36.1 5.2 60 8-69 377-436 (1045)
143 2hqs_A Protein TOLB; TOLB, PAL 77.3 2.5 8.7E-05 32.6 4.2 60 8-70 221-283 (415)
144 2xdw_A Prolyl endopeptidase; a 75.9 5.3 0.00018 32.9 6.0 59 11-72 126-189 (710)
145 2z3z_A Dipeptidyl aminopeptida 74.5 4 0.00014 33.0 4.8 54 10-68 82-135 (706)
146 1k32_A Tricorn protease; prote 74.3 4.6 0.00016 34.9 5.4 60 8-70 419-488 (1045)
147 3qqz_A Putative uncharacterize 72.0 4.6 0.00016 30.3 4.3 62 11-74 28-90 (255)
148 2ecf_A Dipeptidyl peptidase IV 71.4 6.6 0.00022 31.9 5.4 40 9-49 36-81 (741)
149 1nir_A Nitrite reductase; hemo 70.9 5 0.00017 32.5 4.6 55 11-68 180-240 (543)
150 2ecf_A Dipeptidyl peptidase IV 69.6 3.3 0.00011 33.7 3.3 54 11-68 110-166 (741)
151 2mad_H Methylamine dehydrogena 69.4 7.4 0.00025 29.9 5.1 55 9-66 266-330 (373)
152 2z3z_A Dipeptidyl aminopeptida 69.2 3.8 0.00013 33.2 3.5 60 9-69 180-273 (706)
153 3sjl_D Methylamine dehydrogena 66.0 9.3 0.00032 30.4 5.2 61 9-72 279-351 (386)
154 3o4h_A Acylamino-acid-releasin 65.7 3.9 0.00013 32.5 2.9 64 8-74 193-266 (582)
155 1z68_A Fibroblast activation p 64.4 5.5 0.00019 32.3 3.6 54 12-68 62-124 (719)
156 2gop_A Trilobed protease; beta 62.9 13 0.00045 26.7 5.1 55 11-69 60-119 (347)
157 2dg1_A DRP35, lactonase; beta 58.6 14 0.00048 26.5 4.6 59 11-72 46-105 (333)
158 3scy_A Hypothetical bacterial 58.5 13 0.00044 27.1 4.5 57 11-68 212-273 (361)
159 3fvz_A Peptidyl-glycine alpha- 58.4 12 0.0004 27.5 4.2 62 9-72 23-109 (329)
160 3hfq_A Uncharacterized protein 58.4 14 0.00049 26.6 4.6 62 10-72 86-159 (347)
161 1nir_A Nitrite reductase; hemo 55.7 12 0.00043 30.1 4.3 53 17-72 145-197 (543)
162 1mda_H Methylamine dehydrogena 55.5 12 0.0004 29.3 4.0 60 10-72 264-333 (368)
163 2w18_A PALB2, fancn, partner a 54.5 12 0.00041 29.7 3.9 42 8-49 177-220 (356)
164 1xfd_A DIP, dipeptidyl aminope 50.9 18 0.00062 29.1 4.5 56 11-68 62-128 (723)
165 3pe7_A Oligogalacturonate lyas 50.8 27 0.00093 25.4 5.1 52 15-69 41-96 (388)
166 3c75_H MADH, methylamine dehyd 50.7 16 0.00055 29.2 4.1 59 10-71 319-389 (426)
167 3hfq_A Uncharacterized protein 49.3 25 0.00086 25.3 4.7 56 11-68 241-300 (347)
168 1xfd_A DIP, dipeptidyl aminope 49.2 21 0.00073 28.7 4.6 58 11-71 115-190 (723)
169 2gop_A Trilobed protease; beta 47.9 28 0.00096 24.9 4.8 54 12-70 106-186 (347)
170 1mda_H Methylamine dehydrogena 47.0 24 0.00082 27.5 4.5 40 11-51 315-356 (368)
171 2oiz_A Aromatic amine dehydrog 45.7 17 0.00056 27.4 3.3 34 12-47 307-342 (361)
172 1qks_A Cytochrome CD1 nitrite 44.4 28 0.00095 28.6 4.7 49 11-62 198-248 (567)
173 3dsm_A Uncharacterized protein 44.3 27 0.00092 25.7 4.2 39 11-51 268-311 (328)
174 3azo_A Aminopeptidase; POP fam 42.7 50 0.0017 26.2 5.9 64 9-74 187-262 (662)
175 3scy_A Hypothetical bacterial 42.6 38 0.0013 24.5 4.8 55 12-69 261-321 (361)
176 3o4h_A Acylamino-acid-releasin 42.1 20 0.00067 28.3 3.3 56 12-71 112-167 (582)
177 3dsm_A Uncharacterized protein 42.1 43 0.0015 24.5 5.1 50 21-72 139-190 (328)
178 1xip_A Nucleoporin NUP159; bet 42.0 23 0.00079 28.0 3.7 38 25-67 139-176 (388)
179 3g4e_A Regucalcin; six bladed 39.2 27 0.00093 25.0 3.5 55 12-70 15-70 (297)
180 2ghs_A AGR_C_1268P; regucalcin 38.2 22 0.00075 26.1 2.9 55 12-70 51-106 (326)
181 1z68_A Fibroblast activation p 37.8 28 0.00095 28.1 3.6 54 14-69 20-75 (719)
182 3c5m_A Oligogalacturonate lyas 37.0 51 0.0017 23.7 4.7 54 12-68 38-95 (396)
183 3e5z_A Putative gluconolactona 36.5 27 0.00091 24.7 3.0 59 10-72 28-87 (296)
184 4a5s_A Dipeptidyl peptidase 4 36.5 25 0.00085 29.0 3.2 51 15-68 67-126 (740)
185 3pe7_A Oligogalacturonate lyas 36.5 67 0.0023 23.2 5.3 36 12-48 83-118 (388)
186 3azo_A Aminopeptidase; POP fam 36.2 24 0.00082 28.2 3.0 58 9-69 129-203 (662)
187 1jof_A Carboxy-CIS,CIS-muconat 36.0 58 0.002 23.9 5.0 54 11-66 41-95 (365)
188 3qqz_A Putative uncharacterize 34.9 37 0.0013 25.2 3.7 61 11-72 174-242 (255)
189 1q7f_A NHL, brain tumor CG1071 34.8 61 0.0021 22.5 4.7 59 11-71 78-138 (286)
190 2bkl_A Prolyl endopeptidase; m 33.8 45 0.0016 27.2 4.3 62 10-74 121-188 (695)
191 1yr2_A Prolyl oligopeptidase; 33.3 65 0.0022 26.5 5.2 55 11-69 164-223 (741)
192 1xip_A Nucleoporin NUP159; bet 32.2 20 0.0007 28.3 1.9 56 11-69 164-229 (388)
193 3c5m_A Oligogalacturonate lyas 30.6 77 0.0026 22.7 4.8 34 15-49 86-119 (396)
194 2qe8_A Uncharacterized protein 28.5 78 0.0027 23.2 4.6 40 9-50 66-111 (343)
195 3sjl_D Methylamine dehydrogena 27.0 88 0.003 24.6 4.8 37 13-50 140-178 (386)
196 3ktp_B Trinucleotide repeat-co 25.9 19 0.00066 17.4 0.5 10 86-95 4-13 (22)
197 2mad_H Methylamine dehydrogena 25.3 69 0.0024 24.3 3.9 36 11-47 319-356 (373)
198 1pjx_A Dfpase, DIISOPROPYLFLUO 25.3 99 0.0034 21.5 4.5 33 11-45 19-59 (314)
199 3dr2_A Exported gluconolactona 24.7 59 0.002 23.2 3.2 58 11-72 46-104 (305)
200 3no2_A Uncharacterized protein 23.9 86 0.0029 22.6 4.0 45 23-69 6-52 (276)
201 2hz6_A Endoplasmic reticulum t 23.9 1.1E+02 0.0037 23.0 4.7 26 21-46 8-33 (369)
202 1jof_A Carboxy-CIS,CIS-muconat 23.3 1.5E+02 0.0052 21.6 5.3 33 11-44 255-295 (365)
203 2pof_A CDP-diacylglycerol pyro 22.3 34 0.0012 25.6 1.5 14 103-116 96-109 (227)
204 4a5s_A Dipeptidyl peptidase 4 22.1 1.3E+02 0.0043 24.7 5.0 54 12-68 19-76 (740)
205 3c75_H MADH, methylamine dehyd 21.9 1.4E+02 0.0046 23.7 5.0 37 13-50 180-218 (426)
No 1
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.43 E-value=0.00033 Score=51.40 Aligned_cols=69 Identities=6% Similarity=-0.025 Sum_probs=54.5
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
++.|.++|..|+++|. .+.|++|+..|.|.+||..+.+.+..+... ...+.++.|...++...+.+.|+
T Consensus 28 l~~h~~~v~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~dg 96 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKE-GDLLFSCSKDSSASVWYSLNGERLGTLDGH-TGTIWSIDVDCFTKYCVTGSADY 96 (369)
T ss_dssp EECCSSCEEEEEECTT-SCEEEEEESSSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSEEEEEETTT
T ss_pred EEEeeceEEEEEEcCC-CCEEEEEeCCCEEEEEeCCCchhhhhhhhc-CCcEEEEEEcCCCCEEEEEeCCC
Confidence 3457789999999996 889999999999999999888877655422 14567788988888887777664
No 2
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.37 E-value=0.0006 Score=49.94 Aligned_cols=70 Identities=13% Similarity=0.186 Sum_probs=51.3
Q ss_pred CCCCcccchhhhhCCCC--CCeEEEEeecceEEEEeCCC-Ccee-eEEeeccccccccccccCCcccccccCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGS--PNHIIVGYSKGLVVLWDRTT-NTAN-QISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~d--s~~LlIgg~~G~VVl~d~~~-~~~~-~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
++.|.++|..|+++|.+ .+.|+.|+..|.|.+||..+ .+.+ ..+.. -...+.++.|...++...+...|+
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~dg 108 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQM-HTGPVLDVCWSDDGSKVFTASCDK 108 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEE-CSSCEEEEEECTTSSEEEEEETTS
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEecc-ccCCEEEEEECcCCCEEEEEcCCC
Confidence 34577899999999974 47888888899999999876 4443 22221 115577888998888887776664
No 3
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.34 E-value=0.0007 Score=49.10 Aligned_cols=67 Identities=13% Similarity=0.048 Sum_probs=54.9
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
+.|.+.|..|+++|. .+.|++++..|.|.+||..+.+.+..+..+ ..+.++.|..+++.......|+
T Consensus 180 ~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~~~ 246 (337)
T 1gxr_A 180 QGHTDGASCIDISND-GTKLWTGGLDNTVRSWDLREGRQLQQHDFT--SQIFSLGYCPTGEWLAVGMESS 246 (337)
T ss_dssp CCCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECS--SCEEEEEECTTSSEEEEEETTS
T ss_pred ecccCceEEEEECCC-CCEEEEEecCCcEEEEECCCCceEeeecCC--CceEEEEECCCCCEEEEEcCCC
Confidence 346678999999996 899999999999999999998887666555 6778888988888877666554
No 4
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.23 E-value=0.001 Score=49.94 Aligned_cols=67 Identities=9% Similarity=0.023 Sum_probs=51.3
Q ss_pred cccchhhhhCC--CCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 9 PGAVEAIAEQP--GSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 9 p~aV~~I~~cP--~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
.+.|..|+++| . .+.|+.|+..|.|.+||..+.+............+.++.|+.++++..+.+.|+.
T Consensus 125 ~~~v~~~~~~~~~~-~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~ 193 (343)
T 3lrv_A 125 ANEIIYMYGHNEVN-TEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGI 193 (343)
T ss_dssp SSCEEEEECCC----CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSC
T ss_pred CCCEEEEEcCCCCC-CCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCE
Confidence 35799999999 5 7778889999999999999888765443332245778899999999888776654
No 5
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.21 E-value=0.00033 Score=51.87 Aligned_cols=73 Identities=10% Similarity=0.050 Sum_probs=54.6
Q ss_pred CCCCCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCc--eeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 2 PDHYKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNT--ANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 2 ~~~y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~--~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
|+-|+.|.++|..++++|. .+.|++|+..|.|.+||..+.+ .+..+... ...+.++.|..++++..+...|+.
T Consensus 1 ~~~~~~~~~~i~~~~~s~~-~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~~~~~dg~ 75 (372)
T 1k8k_C 1 MAYHSFLVEPISCHAWNKD-RTQIAICPNNHEVHIYEKSGNKWVQVHELKEH-NGQVTGVDWAPDSNRIVTCGTDRN 75 (372)
T ss_dssp -CEEESCSSCCCEEEECTT-SSEEEEECSSSEEEEEEEETTEEEEEEEEECC-SSCEEEEEEETTTTEEEEEETTSC
T ss_pred CceecccCCCeEEEEECCC-CCEEEEEeCCCEEEEEeCCCCcEEeeeeecCC-CCcccEEEEeCCCCEEEEEcCCCe
Confidence 4456678889999999996 8889999999999999988876 44333311 145677889888888877766653
No 6
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.13 E-value=0.00041 Score=50.94 Aligned_cols=71 Identities=15% Similarity=0.094 Sum_probs=55.1
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEe--eccccccccccccCCcccccccCCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIST--MNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~--v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
+.|...|..|+++|.+.+.|+.|+..|.|.+||..+.+.+..+. -.-...+.++.|..+++...+.+.|+.
T Consensus 112 ~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 184 (366)
T 3k26_A 112 VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHS 184 (366)
T ss_dssp ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCC
Confidence 34677999999999668999999999999999999887765541 111155678889988888887776654
No 7
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.13 E-value=0.0009 Score=48.12 Aligned_cols=69 Identities=13% Similarity=0.139 Sum_probs=53.6
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
++.|.++|..|++ |. .+.|+.|+..|.|.+||..+.+....+... ...+.++.|..+++.......|+.
T Consensus 14 l~~h~~~v~~~~~-~~-~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~ 82 (313)
T 3odt_A 14 LKGHDQDVRDVVA-VD-DSKVASVSRDGTVRLWSKDDQWLGTVVYTG-QGFLNSVCYDSEKELLLFGGKDTM 82 (313)
T ss_dssp ECCCSSCEEEEEE-EE-TTEEEEEETTSEEEEEEESSSEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTSC
T ss_pred hhCCCCCcEEEEe-cC-CCEEEEEEcCCcEEEEECCCCEEEEEeecC-CccEEEEEECCCCCEEEEecCCCe
Confidence 4557889999999 75 889999999999999999888766544432 255678889888888877776653
No 8
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.12 E-value=0.00048 Score=53.64 Aligned_cols=67 Identities=12% Similarity=0.181 Sum_probs=48.1
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeec-cccccccccccC-CcccccccCCCCC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMN-IVSDRDSFVWKG-HARLSVKHTGDSK 76 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~-l~~~~es~~W~~-~~~~~~~~~~d~~ 76 (118)
+.|..|+|+|.+.+.|++|+..|.|.|||..+.+....+... =...+.++.|.. ++.+..+.+.|+.
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~ 188 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGT 188 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSC
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCE
Confidence 469999999987889999999999999998776554332211 014567788874 5666666666653
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.12 E-value=0.00058 Score=51.45 Aligned_cols=70 Identities=17% Similarity=0.256 Sum_probs=55.2
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
++.|.+.|..++++|. .+.|+.|+..|.|.+||..+......+... ...+.++.|...++...+.+.|+.
T Consensus 180 ~~~h~~~v~~~~~~~~-~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~d~~ 249 (340)
T 1got_B 180 FTGHTGDVMSLSLAPD-TRLFVSGACDASAKLWDVREGMCRQTFTGH-ESDINAICFFPNGNAFATGSDDAT 249 (340)
T ss_dssp ECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCSEEEEECCC-SSCEEEEEECTTSSEEEEEETTSC
T ss_pred EcCCCCceEEEEECCC-CCEEEEEeCCCcEEEEECCCCeeEEEEcCC-cCCEEEEEEcCCCCEEEEEcCCCc
Confidence 3457789999999996 889999999999999999888776554422 145678889999988888877754
No 10
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.11 E-value=0.00043 Score=50.59 Aligned_cols=70 Identities=19% Similarity=0.245 Sum_probs=47.4
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeecc----ccccccccccCCcccccccCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNI----VSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l----~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
+.|-++|..|+++|.+.+.|+-|+..|.|.|||..+.+......... ...+.++.|..++++..+...|+
T Consensus 35 ~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~ 108 (340)
T 4aow_A 35 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG 108 (340)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccc
Confidence 45888999999999866777788999999999876654321111111 13455677877777766555553
No 11
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.11 E-value=0.00044 Score=50.66 Aligned_cols=67 Identities=15% Similarity=0.280 Sum_probs=54.2
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccc--cCCcccccccCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVW--KGHARLSVKHTGDS 75 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W--~~~~~~~~~~~~d~ 75 (118)
+.|.++|..++++|. .+.|+.|+..|.|.+||..+.+......-+ ..+.++.| ...+++..+.+.|+
T Consensus 83 ~~h~~~v~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~~~~~dg 151 (368)
T 3mmy_A 83 QMHTGPVLDVCWSDD-GSKVFTASCDKTAKMWDLSSNQAIQIAQHD--APVKTIHWIKAPNYSCVMTGSWDK 151 (368)
T ss_dssp EECSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECS--SCEEEEEEEECSSCEEEEEEETTS
T ss_pred ccccCCEEEEEECcC-CCEEEEEcCCCcEEEEEcCCCCceeecccc--CceEEEEEEeCCCCCEEEEccCCC
Confidence 346789999999995 899999999999999999999887654444 66788889 77777777766564
No 12
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.10 E-value=0.00058 Score=54.36 Aligned_cols=69 Identities=13% Similarity=0.146 Sum_probs=53.3
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
.|..+|..|+|+|.+.+.|+.|+..|.|.+||..+...+.... .-...+.++.|+.++++....+.|++
T Consensus 147 ~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~-~~~~~v~~v~wspdg~~lasgs~dg~ 215 (434)
T 2oit_A 147 DAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATL-PSTVAVTSVCWSPKGKQLAVGKQNGT 215 (434)
T ss_dssp SGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEE-CGGGCEEEEEECTTSSCEEEEETTSC
T ss_pred CCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeecc-CCCCceeEEEEcCCCCEEEEEcCCCc
Confidence 3677999999999878889999999999999998875542221 11255778899999998887776654
No 13
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.08 E-value=0.0019 Score=48.53 Aligned_cols=69 Identities=12% Similarity=0.122 Sum_probs=52.0
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeecc-----ccccccccccCCcc-cccccCCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNI-----VSDRDSFVWKGHAR-LSVKHTGDS 75 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l-----~~~~es~~W~~~~~-~~~~~~~d~ 75 (118)
.|...|..|+++|.....|+.|+..|.|.+||..+.+.+..+...- ...+.++.|...++ +......|+
T Consensus 163 ~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 237 (416)
T 2pm9_A 163 SSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD 237 (416)
T ss_dssp CSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCS
T ss_pred CCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCC
Confidence 4677999999999767889999999999999999888775555421 15567888988864 555555454
No 14
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.08 E-value=0.0022 Score=46.01 Aligned_cols=69 Identities=12% Similarity=0.056 Sum_probs=49.8
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCc----eeeEEeeccccccccccccC--CcccccccCCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNT----ANQISTMNIVSDRDSFVWKG--HARLSVKHTGDSK 76 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~----~~~~~~v~l~~~~es~~W~~--~~~~~~~~~~d~~ 76 (118)
+.|.++|..|+++|. .+.|+.|+..|.|.+||..+.. ....+.. -...+.++.|.. ++++..+.+.|+.
T Consensus 8 ~gH~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFY-GRHVATCSSDQHIKVFKLDKDTSNWELSDSWRA-HDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp CCCSSCEEEEEECSS-SSEEEEEETTSEEEEEEECSSSCCEEEEEEEEC-CSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cccccceeEEEEcCC-CCEEEEeeCCCeEEEEECCCCCCcceecceecc-CCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 458889999999996 8899999999999999887653 2222221 114567788977 4777777766654
No 15
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.06 E-value=0.0016 Score=49.01 Aligned_cols=70 Identities=17% Similarity=0.206 Sum_probs=53.7
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeec-cccccccccccCCcccccccCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMN-IVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~-l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
++.|...|..|+++|. .+.|+.|+..|.|.+||..+.+.+..+... ....+.++.|...+++..+...|+
T Consensus 222 ~~~h~~~v~~v~~~p~-~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~ 292 (340)
T 1got_B 222 FTGHESDINAICFFPN-GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF 292 (340)
T ss_dssp ECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred EcCCcCCEEEEEEcCC-CCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCC
Confidence 3457778999999997 899999999999999999887765444322 112456788999998888777664
No 16
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.05 E-value=0.0009 Score=49.47 Aligned_cols=69 Identities=16% Similarity=0.234 Sum_probs=52.1
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEe-eccccccccccccCCcccccccCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIST-MNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~-v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
+.|.+.|..|+++|. .+.|+.|+..|.|.+||..+.+....+. ......+.++.|..+++.......|+
T Consensus 49 ~~h~~~v~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 118 (372)
T 1k8k_C 49 KEHNGQVTGVDWAPD-SNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSR 118 (372)
T ss_dssp ECCSSCEEEEEEETT-TTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred cCCCCcccEEEEeCC-CCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCC
Confidence 446779999999995 8999999999999999998876543332 12124567788988888877766554
No 17
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.05 E-value=0.00053 Score=51.35 Aligned_cols=70 Identities=9% Similarity=0.166 Sum_probs=47.2
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCc---eeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNT---ANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~---~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
++.|.+.|..|+++|. .+.|+.|+..|.|.+||..+.+ .... ...-...+.++.|..+++...+.+.|+.
T Consensus 51 ~~~h~~~v~~~~~s~~-~~~l~s~s~d~~v~vwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 123 (377)
T 3dwl_C 51 FSDHDKIVTCVDWAPK-SNRIVTCSQDRNAYVYEKRPDGTWKQTLV-LLRLNRAATFVRWSPNEDKFAVGSGARV 123 (377)
T ss_dssp BCCCSSCEEEEEECTT-TCCEEEEETTSSEEEC------CCCCEEE-CCCCSSCEEEEECCTTSSCCEEEESSSC
T ss_pred EecCCceEEEEEEeCC-CCEEEEEeCCCeEEEEEcCCCCceeeeeE-ecccCCceEEEEECCCCCEEEEEecCCe
Confidence 4557789999999997 8899999999999999988776 2111 1111155677889888888877776643
No 18
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.03 E-value=0.00092 Score=49.57 Aligned_cols=69 Identities=13% Similarity=0.173 Sum_probs=52.3
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
|+.|-.+|..|+++|. ...|+.|+..|.|.|||..+.+.+..+... ...+.+..|..++++..+.+.|+
T Consensus 9 ~~~h~~~V~~~~fsp~-~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~s~d~ 77 (304)
T 2ynn_A 9 FSNRSDRVKGIDFHPT-EPWVLTTLYSGRVELWNYETQVEVRSIQVT-ETPVRAGKFIARKNWIIVGSDDF 77 (304)
T ss_dssp EEEECSCEEEEEECSS-SSEEEEEETTSEEEEEETTTTEEEEEEECC-SSCEEEEEEEGGGTEEEEEETTS
T ss_pred ecCCCCceEEEEECCC-CCEEEEEcCCCcEEEEECCCCceeEEeecc-CCcEEEEEEeCCCCEEEEECCCC
Confidence 4557789999999997 889999999999999999888776544432 02345666777777777776564
No 19
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.00 E-value=0.0006 Score=56.25 Aligned_cols=69 Identities=12% Similarity=0.168 Sum_probs=55.5
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
++.|.+.|..|+++|. .+.|++|+..|.|.|||..+.+.+..+... ...+.++.|..+++...+.+.|+
T Consensus 9 ~~~h~~~v~~i~~sp~-~~~la~~~~~g~v~iwd~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg 77 (814)
T 3mkq_A 9 FSNRSDRVKGIDFHPT-EPWVLTTLYSGRVEIWNYETQVEVRSIQVT-ETPVRAGKFIARKNWIIVGSDDF 77 (814)
T ss_dssp EEEECSCEEEEEECSS-SSEEEEEETTSEEEEEETTTTEEEEEEECC-SSCEEEEEEEGGGTEEEEEETTS
T ss_pred eecCCCceEEEEECCC-CCEEEEEeCCCEEEEEECCCCceEEEEecC-CCcEEEEEEeCCCCEEEEEeCCC
Confidence 3457889999999996 899999999999999999888777665532 14567888999998887777564
No 20
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.97 E-value=0.0023 Score=49.00 Aligned_cols=63 Identities=13% Similarity=0.182 Sum_probs=48.0
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccc
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVK 70 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~ 70 (118)
+.|.+.|..++++|. .+.|++|+..|.|.+||..+.+.+..+... ...+.++.|+..+.....
T Consensus 214 ~~~~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~p~~~~ll~ 276 (401)
T 4aez_A 214 QGHSSEVCGLAWRSD-GLQLASGGNDNVVQIWDARSSIPKFTKTNH-NAAVKAVAWCPWQSNLLA 276 (401)
T ss_dssp ECCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTCSSEEEEECCC-SSCCCEEEECTTSTTEEE
T ss_pred cCCCCCeeEEEEcCC-CCEEEEEeCCCeEEEccCCCCCccEEecCC-cceEEEEEECCCCCCEEE
Confidence 346789999999995 899999999999999999988776443311 255678889886654443
No 21
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.97 E-value=0.0016 Score=48.04 Aligned_cols=70 Identities=11% Similarity=0.235 Sum_probs=50.2
Q ss_pred CCcccchhhhhCCC------------CCCeEEEEeecceEEEEeCCCCceeeEEeecc---ccccccccccCC---cccc
Q psy8836 7 LNPGAVEAIAEQPG------------SPNHIIVGYSKGLVVLWDRTTNTANQISTMNI---VSDRDSFVWKGH---ARLS 68 (118)
Q Consensus 7 ~~p~aV~~I~~cP~------------ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l---~~~~es~~W~~~---~~~~ 68 (118)
.|...|..++++|. |.+.|+.|+..|.|.+||..+..........+ ...+.++.|... ++..
T Consensus 145 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l 224 (379)
T 3jrp_A 145 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYL 224 (379)
T ss_dssp CCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEE
T ss_pred CCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeE
Confidence 35678999999995 58999999999999999987654321111111 144567889888 7777
Q ss_pred cccCCCCC
Q psy8836 69 VKHTGDSK 76 (118)
Q Consensus 69 ~~~~~d~~ 76 (118)
.+.+.|+.
T Consensus 225 ~s~~~dg~ 232 (379)
T 3jrp_A 225 ASVSQDRT 232 (379)
T ss_dssp EEEETTSC
T ss_pred EEEeCCCE
Confidence 77776654
No 22
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.96 E-value=0.001 Score=48.56 Aligned_cols=61 Identities=11% Similarity=0.137 Sum_probs=48.1
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCccccc
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSV 69 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~ 69 (118)
+.|.++|..|+++|. .+.|+.|+..|.|.+||..+.+.+..+... ..+.++.|...+.+..
T Consensus 212 ~~h~~~v~~~~~s~~-~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~ 272 (340)
T 4aow_A 212 IGHTGYLNTVTVSPD-GSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLC 272 (340)
T ss_dssp CCCSSCEEEEEECTT-SSEEEEEETTCEEEEEETTTTEEEEEEECS--SCEEEEEECSSSSEEE
T ss_pred cCCCCcEEEEEECCC-CCEEEEEeCCCeEEEEEeccCceeeeecCC--ceEEeeecCCCCceee
Confidence 346678999999996 889999999999999999998887666555 6666777776655543
No 23
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.95 E-value=0.0028 Score=46.40 Aligned_cols=69 Identities=10% Similarity=0.088 Sum_probs=53.6
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
+.|...|..|+++|. .+.|+.|+..|.|.+||..+.+.+..+... ...+.++.|...+++..+.+.|++
T Consensus 62 ~~h~~~v~~~~~~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d~~ 130 (312)
T 4ery_A 62 SGHKLGISDVAWSSD-SNLLVSASDDKTLKIWDVSSGKCLKTLKGH-SNYVFCCNFNPQSNLIVSGSFDES 130 (312)
T ss_dssp CCCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEECSSSSEEEEEETTSC
T ss_pred ccCCCceEEEEEcCC-CCEEEEECCCCEEEEEECCCCcEEEEEcCC-CCCEEEEEEcCCCCEEEEEeCCCc
Confidence 346778999999996 899999999999999999988876555432 133556778888888877776654
No 24
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.92 E-value=0.0043 Score=46.11 Aligned_cols=67 Identities=13% Similarity=0.101 Sum_probs=50.1
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCc---ccccccCCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHA---RLSVKHTGDS 75 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~---~~~~~~~~d~ 75 (118)
.|.+.|..|+++|.+.+.|+.|+..|.|.+||..+.+.+..+... ....++.|.... .+......|+
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFE--ETVYSHHMSPVSTKHCLVAVGTRGP 166 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECS--SCEEEEEECSSCSSCCEEEEEESSS
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCC--CceeeeEeecCCCCCcEEEEEcCCC
Confidence 367799999999976889999999999999999998887666544 556666665533 3555554443
No 25
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.92 E-value=0.0016 Score=49.97 Aligned_cols=63 Identities=21% Similarity=0.318 Sum_probs=49.9
Q ss_pred CCcccchhhhhCCCCCCeEEEEe--ecceEEEEeCCCCceeeEEeeccccccccccccCCccccccc
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGY--SKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKH 71 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg--~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~ 71 (118)
.+..+|..|+++|.....++.|+ ..|.|.+||..+.+.+..+... ..+.++.|..+++.....
T Consensus 257 ~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~ 321 (401)
T 4aez_A 257 NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG--SQVTSLIWSPHSKEIMST 321 (401)
T ss_dssp CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS--SCEEEEEECSSSSEEEEE
T ss_pred CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC--CcEEEEEECCCCCeEEEE
Confidence 46679999999997445555544 5899999999998887766655 778899999999888764
No 26
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.91 E-value=0.0027 Score=48.60 Aligned_cols=71 Identities=17% Similarity=0.171 Sum_probs=53.7
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccc------cccccccccCCcccccccCCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIV------SDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~------~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
+..|.+.|..|+++|. .+.|+.|+..|.|.+||..+.+.+..+...-. ..+.++.|...+++..+...|+.
T Consensus 245 ~~~h~~~v~~v~~~p~-~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~ 321 (380)
T 3iz6_a 245 YHGHEGDINSVKFFPD-GQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD 321 (380)
T ss_dssp ECCCSSCCCEEEECTT-SSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC
T ss_pred ECCcCCCeEEEEEecC-CCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCC
Confidence 3447789999999996 89999999999999999999887755543200 11456778888888877776653
No 27
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.90 E-value=0.0026 Score=48.14 Aligned_cols=68 Identities=7% Similarity=0.064 Sum_probs=52.1
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcc-cccccCCCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHAR-LSVKHTGDSK 76 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~-~~~~~~~d~~ 76 (118)
+...|..++++|. .+.|++|+..|.|.+||..+.+.+..+.......+.++.|...++ +..+...|+.
T Consensus 246 ~~~~v~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~ 314 (420)
T 3vl1_A 246 STSKKNNLEFGTY-GKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGM 314 (420)
T ss_dssp CCCCCCTTCSSCT-TEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred ccCcccceEEcCC-CCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCe
Confidence 3467888999996 889999999999999999888776554433224567888998888 6666665653
No 28
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=96.88 E-value=0.00064 Score=59.12 Aligned_cols=70 Identities=9% Similarity=0.106 Sum_probs=56.2
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeecc-----------------ccccccccccCCcccc
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNI-----------------VSDRDSFVWKGHARLS 68 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l-----------------~~~~es~~W~~~~~~~ 68 (118)
+.|.++|..|+++|.+.++|++|+..|.| |||..+.+.+..+.... ...+.++.|+.+++..
T Consensus 148 ~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~l 226 (902)
T 2oaj_A 148 AARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHI 226 (902)
T ss_dssp SSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEE
T ss_pred ccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEE
Confidence 45788999999999878999999999999 99999988776554321 0236678899999988
Q ss_pred cccCCCCC
Q psy8836 69 VKHTGDSK 76 (118)
Q Consensus 69 ~~~~~d~~ 76 (118)
.+.+.|++
T Consensus 227 asgs~Dg~ 234 (902)
T 2oaj_A 227 ITIHEDNS 234 (902)
T ss_dssp EEEETTCC
T ss_pred EEEECCCe
Confidence 88887764
No 29
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.87 E-value=0.0021 Score=48.38 Aligned_cols=69 Identities=9% Similarity=0.099 Sum_probs=53.3
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
+.|..+|..|+++|. .+.|+.|+..|.|.+||..+.+....+... ...+.++.|..+++...+.+.|++
T Consensus 203 ~~h~~~v~~l~~spd-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h-~~~v~~~~~sp~~~~l~s~s~D~~ 271 (321)
T 3ow8_A 203 EGHAMPIRSLTFSPD-SQLLVTASDDGYIKIYDVQHANLAGTLSGH-ASWVLNVAFCPDDTHFVSSSSDKS 271 (321)
T ss_dssp CCCSSCCCEEEECTT-SCEEEEECTTSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSEEEEEETTSC
T ss_pred cccCCceeEEEEcCC-CCEEEEEcCCCeEEEEECCCcceeEEEcCC-CCceEEEEECCCCCEEEEEeCCCc
Confidence 346678999999996 889999999999999999888776544322 133567789888888888776754
No 30
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.87 E-value=0.0014 Score=47.99 Aligned_cols=66 Identities=9% Similarity=0.054 Sum_probs=54.6
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d 74 (118)
+.|.+.|..|+++|. .+.|+.|+..|.|.+||..+.+.+..+... ..+.++.|...++.......+
T Consensus 71 ~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~~ 136 (369)
T 3zwl_B 71 DGHTGTIWSIDVDCF-TKYCVTGSADYSIKLWDVSNGQCVATWKSP--VPVKRVEFSPCGNYFLAILDN 136 (369)
T ss_dssp CCCSSCEEEEEECTT-SSEEEEEETTTEEEEEETTTCCEEEEEECS--SCEEEEEECTTSSEEEEEECC
T ss_pred hhcCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEEEeecC--CCeEEEEEccCCCEEEEecCC
Confidence 446779999999996 899999999999999999998887776655 778888998888877665544
No 31
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.85 E-value=0.00084 Score=49.50 Aligned_cols=70 Identities=9% Similarity=-0.004 Sum_probs=49.6
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCC--CCceeeEEeeccccccccccccCC--cccccccCCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRT--TNTANQISTMNIVSDRDSFVWKGH--ARLSVKHTGDSK 76 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~--~~~~~~~~~v~l~~~~es~~W~~~--~~~~~~~~~d~~ 76 (118)
++.|.++|..|+++|. .+.|++|+..|.|.+||.. +.+.+..+... ...+.++.|... +++..+.+.|+.
T Consensus 7 ~~~h~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYY-GKRLATCSSDKTIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp EEECCCCEEEEEECSS-SSEEEEEETTSCEEEEEEETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred ecCCcccEEEEEEcCC-CCEEEEEECCCcEEEEecCCCcceeeeEecCC-CCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 3457889999999996 8899999999999999886 33333332211 144567788654 777777766654
No 32
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.85 E-value=0.0022 Score=48.87 Aligned_cols=65 Identities=8% Similarity=0.026 Sum_probs=49.8
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEE-eeccccccccccccCCccccccc
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIS-TMNIVSDRDSFVWKGHARLSVKH 71 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~-~v~l~~~~es~~W~~~~~~~~~~ 71 (118)
..|.+.|..|+++|. .+.|++|+..|.|.+||..+.+.+..+ ...--....++.|..++++....
T Consensus 173 ~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 173 DVHPDTIYSVDWSRD-GALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTG 238 (402)
T ss_dssp TTCCSCEEEEEECTT-SSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEE
T ss_pred CCCCCceEEEEECCC-CCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEe
Confidence 457789999999995 899999999999999999988877554 22200114567798888877765
No 33
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.83 E-value=0.005 Score=46.46 Aligned_cols=68 Identities=13% Similarity=0.203 Sum_probs=50.5
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCcee--eEEeeccccccccccccCCcccccccCCCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTAN--QISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~--~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
.|.+.|..|+++|. .+.|+.|+..|.|.|||..+.... ..+... ...+.++.|..++++..+.+.|+.
T Consensus 59 ~h~~~v~~~~~sp~-g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h-~~~v~~v~~sp~~~~l~s~s~D~~ 128 (345)
T 3fm0_A 59 GHQRTVRKVAWSPC-GNYLASASFDATTCIWKKNQDDFECVTTLEGH-ENEVKSVAWAPSGNLLATCSRDKS 128 (345)
T ss_dssp SCSSCEEEEEECTT-SSEEEEEETTSCEEEEEECCC-EEEEEEECCC-SSCEEEEEECTTSSEEEEEETTSC
T ss_pred ccCCcEEEEEECCC-CCEEEEEECCCcEEEEEccCCCeEEEEEccCC-CCCceEEEEeCCCCEEEEEECCCe
Confidence 46779999999996 899999999999999988766432 222211 134667889999988887776654
No 34
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.77 E-value=0.0011 Score=49.28 Aligned_cols=70 Identities=16% Similarity=0.306 Sum_probs=49.2
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeec------------cccccccccccC-CcccccccC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMN------------IVSDRDSFVWKG-HARLSVKHT 72 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~------------l~~~~es~~W~~-~~~~~~~~~ 72 (118)
+.|.++|..|+++|.|.+.|+.|+..|.|.+||..+.+....+... -...+.++.|.. .+.+..+.+
T Consensus 40 ~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 119 (408)
T 4a11_B 40 RIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS 119 (408)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE
T ss_pred eccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe
Confidence 4477899999999955899999999999999998777655433311 114456677876 555665555
Q ss_pred CCC
Q psy8836 73 GDS 75 (118)
Q Consensus 73 ~d~ 75 (118)
.|+
T Consensus 120 ~d~ 122 (408)
T 4a11_B 120 FDK 122 (408)
T ss_dssp TTS
T ss_pred CCC
Confidence 454
No 35
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.77 E-value=0.0015 Score=49.71 Aligned_cols=71 Identities=6% Similarity=0.048 Sum_probs=56.2
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecce-EEEEeCCCCceeeEEeec-cccccccccccCCcccccccCCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGL-VVLWDRTTNTANQISTMN-IVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~-VVl~d~~~~~~~~~~~v~-l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
++.|-++|..|+++|. .+.|+.|+..|. |.|||..+.+.+..+... -...+.++.|..+++...+.+.|++
T Consensus 191 ~~~h~~~v~~~~~s~~-g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~ 263 (355)
T 3vu4_A 191 IKAHTNPIKMVRLNRK-SDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWT 263 (355)
T ss_dssp ECCCSSCEEEEEECTT-SSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCE
T ss_pred EEccCCceEEEEECCC-CCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCE
Confidence 3457789999999995 889999999997 999999998887666511 1256778899999998877776653
No 36
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.77 E-value=0.0018 Score=48.99 Aligned_cols=70 Identities=7% Similarity=0.072 Sum_probs=54.6
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
++.|.+.|..|+++|. .+.|+.|+..|.|.+||..+.+.+..+... ...+.++.|..++++..+.+.|+.
T Consensus 135 ~~~h~~~v~~~~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~d~~ 204 (420)
T 3vl1_A 135 DQAHVSEITKLKFFPS-GEALISSSQDMQLKIWSVKDGSNPRTLIGH-RATVTDIAIIDRGRNVLSASLDGT 204 (420)
T ss_dssp TTSSSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTCCCCEEEECC-SSCEEEEEEETTTTEEEEEETTSC
T ss_pred cccccCccEEEEECCC-CCEEEEEeCCCeEEEEeCCCCcCceEEcCC-CCcEEEEEEcCCCCEEEEEcCCCc
Confidence 3457889999999996 889999999999999999888776554421 145677889888888777766654
No 37
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.76 E-value=0.0031 Score=47.36 Aligned_cols=69 Identities=10% Similarity=-0.010 Sum_probs=53.4
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCc-ccccccCCCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHA-RLSVKHTGDSK 76 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~-~~~~~~~~d~~ 76 (118)
.|...|..|+++|.|.+.|+.|+..|.|.+||..+.+.+..+... ...+.++.|...+ ++..+.+.|+.
T Consensus 260 ~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~l~s~~~d~~ 329 (416)
T 2pm9_A 260 GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPAR-GNWCFKTKFAPEAPDLFACASFDNK 329 (416)
T ss_dssp CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECS-SSCCCCEEECTTCTTEEEECCSSSE
T ss_pred CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCC-CCceEEEEECCCCCCEEEEEecCCc
Confidence 466789999999966999999999999999999888877555432 1456788898887 66666665643
No 38
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.76 E-value=0.0021 Score=46.51 Aligned_cols=66 Identities=15% Similarity=0.075 Sum_probs=52.5
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
.+...|..++++|. .+.|++++..|.|.+||..+.+.+....-. ..+.++.|..+++.......|+
T Consensus 263 ~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~dg 328 (337)
T 1gxr_A 263 LHESCVLSLKFAYC-GKWFVSTGKDNLLNAWRTPYGASIFQSKES--SSVLSCDISVDDKYIVTGSGDK 328 (337)
T ss_dssp CCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECS--SCEEEEEECTTSCEEEEEETTS
T ss_pred CCccceeEEEECCC-CCEEEEecCCCcEEEEECCCCeEEEEecCC--CcEEEEEECCCCCEEEEecCCC
Confidence 46678999999996 889999999999999999888776443333 5677888988888877666554
No 39
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.73 E-value=0.0029 Score=48.29 Aligned_cols=66 Identities=11% Similarity=0.100 Sum_probs=48.9
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcc-cccccCCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHAR-LSVKHTGDS 75 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~-~~~~~~~d~ 75 (118)
|...|..|+++|. .+.|+.|+..|.|.+||..+.+.+..+... ...+.++.|...+. ++.+...|+
T Consensus 138 h~~~V~~v~~spd-g~~l~sgs~dg~v~iwd~~~~~~~~~~~~h-~~~v~~v~~s~~~~~~~~s~~~dg 204 (357)
T 4g56_B 138 HDDIVKTLSVFSD-GTQAVSGGKDFSVKVWDLSQKAVLKSYNAH-SSEVNCVAACPGKDTIFLSCGEDG 204 (357)
T ss_dssp CSSCEEEEEECSS-SSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTCSSCEEEEETTS
T ss_pred CCCCEEEEEECCC-CCEEEEEeCCCeEEEEECCCCcEEEEEcCC-CCCEEEEEEccCCCceeeeeccCC
Confidence 5678999999996 899999999999999999998887655432 13456677766554 455555554
No 40
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.69 E-value=0.0013 Score=50.43 Aligned_cols=69 Identities=3% Similarity=-0.041 Sum_probs=54.6
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEe-eccccccccccccCCcccccccCCCCCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIST-MNIVSDRDSFVWKGHARLSVKHTGDSKDK 78 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~-v~l~~~~es~~W~~~~~~~~~~~~d~~~~ 78 (118)
|..+|..++++|. .+.|+.|+..|.|.|||..+.+.+..+. .. ...+.++.|..++++..+.+.|++.+
T Consensus 268 ~~~~V~~~~~Spd-g~~lasgs~D~~V~iwd~~~~~~~~~~~~gH-~~~V~~v~fSpdg~~laS~S~D~tvr 337 (365)
T 4h5i_A 268 RFKGITSMDVDMK-GELAVLASNDNSIALVKLKDLSMSKIFKQAH-SFAITEVTISPDSTYVASVSAANTIH 337 (365)
T ss_dssp SCSCEEEEEECTT-SCEEEEEETTSCEEEEETTTTEEEEEETTSS-SSCEEEEEECTTSCEEEEEETTSEEE
T ss_pred CCCCeEeEEECCC-CCceEEEcCCCEEEEEECCCCcEEEEecCcc-cCCEEEEEECCCCCEEEEEeCCCeEE
Confidence 5568999999996 8999999999999999999988775432 21 14467889999999988888776543
No 41
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.68 E-value=0.0034 Score=47.38 Aligned_cols=70 Identities=17% Similarity=0.261 Sum_probs=50.8
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEe-ec-cccccccccccCCcccccccCCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIST-MN-IVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~-v~-l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
+.|.+.|..++++|. .+.|+.|+..|.|.+||..+.+...... .+ -...+.++.|+..+++..+.+.|+.
T Consensus 102 ~~h~~~v~~v~~sp~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~ 173 (345)
T 3fm0_A 102 EGHENEVKSVAWAPS-GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDT 173 (345)
T ss_dssp CCCSSCEEEEEECTT-SSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSC
T ss_pred cCCCCCceEEEEeCC-CCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCc
Confidence 446779999999996 8999999999999999987654322111 11 1144667889998888877776653
No 42
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.67 E-value=0.0025 Score=50.31 Aligned_cols=71 Identities=17% Similarity=0.178 Sum_probs=54.4
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccC----------CcccccccCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKG----------HARLSVKHTGD 74 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~----------~~~~~~~~~~d 74 (118)
+..|.+.|..++++|. .+.|++|+..|.|.+||..+.+.+..+...-...+.++.|.. .+++..+.+.|
T Consensus 484 ~~~~~~~v~~~~~s~~-g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d 562 (615)
T 1pgu_A 484 KTPLRAKPSYISISPS-ETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD 562 (615)
T ss_dssp SSCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETT
T ss_pred cCCccCceEEEEECCC-CCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCC
Confidence 3457789999999997 899999999999999999888876543320124567788988 78888777766
Q ss_pred CC
Q psy8836 75 SK 76 (118)
Q Consensus 75 ~~ 76 (118)
+.
T Consensus 563 g~ 564 (615)
T 1pgu_A 563 TN 564 (615)
T ss_dssp SC
T ss_pred Cc
Confidence 54
No 43
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.67 E-value=0.0015 Score=49.91 Aligned_cols=69 Identities=10% Similarity=0.002 Sum_probs=51.5
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccC-CcccccccCCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKG-HARLSVKHTGDSK 76 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~-~~~~~~~~~~d~~ 76 (118)
+.+..+|..|+++|.+.+.|+.|+..|.|.|||..+.+.+..+.-. ..+.++.|+. ++++..+.+.|++
T Consensus 266 ~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~--~~V~~vafsP~d~~~l~s~s~Dg~ 335 (357)
T 4g56_B 266 AVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHR--DFVTGVAWSPLDHSKFTTVGWDHK 335 (357)
T ss_dssp CCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCS--SCEEEEEECSSSTTEEEEEETTSC
T ss_pred eccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCC--CCEEEEEEeCCCCCEEEEEcCCCe
Confidence 3456789999999985566777888899999999998887543222 4567888984 6777777776754
No 44
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.65 E-value=0.0016 Score=47.73 Aligned_cols=69 Identities=14% Similarity=0.041 Sum_probs=49.7
Q ss_pred CcccchhhhhCCC--CCCeEEEEeecceEEEEeCCCCceeeEEee----ccccccccccccCCcc-cccccCCCCC
Q psy8836 8 NPGAVEAIAEQPG--SPNHIIVGYSKGLVVLWDRTTNTANQISTM----NIVSDRDSFVWKGHAR-LSVKHTGDSK 76 (118)
Q Consensus 8 ~p~aV~~I~~cP~--ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v----~l~~~~es~~W~~~~~-~~~~~~~d~~ 76 (118)
+...|..++++|. +.+.|++|+..|.|.+||..+.+....+.. .-...+.++.|...++ +..+.+.|+.
T Consensus 208 ~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 283 (357)
T 3i2n_A 208 IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGG 283 (357)
T ss_dssp CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE
T ss_pred CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCc
Confidence 4568999999994 489999999999999998876655433321 1114566788988887 6666665653
No 45
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.65 E-value=0.0015 Score=49.92 Aligned_cols=69 Identities=17% Similarity=0.185 Sum_probs=53.2
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEe-eccccccccccccCCcccccccCCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIST-MNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~-v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
.|...|..|+++|...+.|+.|+..|.|.+||..+.+.+..+. ..-...+.++.|..+++...+.+.|+
T Consensus 129 ~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 198 (402)
T 2aq5_A 129 GHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDK 198 (402)
T ss_dssp CCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTS
T ss_pred CCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCC
Confidence 3677999999999845789999999999999999888775542 11124567888998888887776564
No 46
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.59 E-value=0.0033 Score=48.88 Aligned_cols=69 Identities=14% Similarity=0.090 Sum_probs=48.7
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccc-cccccccccCCcccccccCCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIV-SDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~-~~~es~~W~~~~~~~~~~~~d~ 75 (118)
.|-++|..|+++|.|.++|+.|+..|.|.+||..++........+-. ....++.|...+++..+.+.|+
T Consensus 162 gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg 231 (435)
T 4e54_B 162 GAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVG 231 (435)
T ss_dssp SSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSS
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCC
Confidence 46779999999998899999999999999999987655322222100 1234566777777776665554
No 47
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.57 E-value=0.0048 Score=47.94 Aligned_cols=70 Identities=10% Similarity=0.170 Sum_probs=50.2
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCC---ceeeEEeeccccccccccccCCcc-cccccCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTN---TANQISTMNIVSDRDSFVWKGHAR-LSVKHTGDS 75 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~---~~~~~~~v~l~~~~es~~W~~~~~-~~~~~~~d~ 75 (118)
+..|...|..|+++|.+.+.|+.++..|.|.+||..+. ..+..+... ...+.++.|+..++ +..+.+.|+
T Consensus 227 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~v~~i~~~p~~~~~l~tg~~dg 300 (430)
T 2xyi_A 227 FTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH-TAEVNCLSFNPYSEFILATGSADK 300 (430)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC-SSCEEEEEECSSCTTEEEEEETTS
T ss_pred ecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC-CCCeEEEEeCCCCCCEEEEEeCCC
Confidence 34567789999999976888899999999999998766 333333211 14567888988887 455666554
No 48
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.56 E-value=0.0045 Score=46.26 Aligned_cols=64 Identities=11% Similarity=0.042 Sum_probs=52.8
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEee-------ccccccccccccCCcccccccCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTM-------NIVSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v-------~l~~~~es~~W~~~~~~~~~~~~d 74 (118)
.+...|..|+++|. . .|++|+..|.|.+||..+.+.+..+.. + ..+.++.|...+++..+.+.|
T Consensus 184 ~~~~~i~~~~~~~~-~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~--~~i~~i~~~~~~~~l~~~~~d 254 (397)
T 1sq9_A 184 TPSQFATSVDISER-G-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNS--NSIRSVKFSPQGSLLAIAHDS 254 (397)
T ss_dssp SSCCCCCEEEECTT-S-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCC--CCEEEEEECSSTTEEEEEEEE
T ss_pred CCCCCceEEEECCC-c-eEEEEeCCCcEEEEECCCCceeEEEeccccccccC--CccceEEECCCCCEEEEEecC
Confidence 36678999999997 5 999999999999999998888766665 4 667888998888887766655
No 49
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.54 E-value=0.0049 Score=47.21 Aligned_cols=67 Identities=9% Similarity=0.154 Sum_probs=50.5
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcc-cccccCCCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHAR-LSVKHTGDSK 76 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~-~~~~~~~d~~ 76 (118)
|-++|..|+++|. .+.|+.|+..|.|.+||..+.+.+..+... ...+.++.|..+++ ++.+.+.|++
T Consensus 126 H~~~V~~v~~spd-g~~l~sgs~d~~i~iwd~~~~~~~~~~~~h-~~~V~~~~~~~~~~~~l~s~s~D~~ 193 (344)
T 4gqb_B 126 HDDIVSTVSVLSS-GTQAVSGSKDICIKVWDLAQQVVLSSYRAH-AAQVTCVAASPHKDSVFLSCSEDNR 193 (344)
T ss_dssp CSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEECSSCTTEEEEEETTSC
T ss_pred CCCCEEEEEECCC-CCEEEEEeCCCeEEEEECCCCcEEEEEcCc-CCceEEEEecCCCCCceeeeccccc
Confidence 5678999999996 889999999999999999998887655432 13456777877765 4556555543
No 50
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.53 E-value=0.0068 Score=44.32 Aligned_cols=68 Identities=12% Similarity=0.042 Sum_probs=51.1
Q ss_pred CcccchhhhhCCCCC---CeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccC-CcccccccCCCCC
Q psy8836 8 NPGAVEAIAEQPGSP---NHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKG-HARLSVKHTGDSK 76 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds---~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~-~~~~~~~~~~d~~ 76 (118)
+.+.|..++++|... +.|++|+..|.|.+||..+.+.+..+... ...+.++.|.. .+.+..+...|+.
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~l~s~~~dg~ 139 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGH-GNAINELKFHPRDPNLLLSVSKDHA 139 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESC-CSCEEEEEECSSCTTEEEEEETTSC
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCC-CCcEEEEEECCCCCCEEEEEeCCCe
Confidence 346799999999733 47888999999999999888877655421 25577888988 7777777776654
No 51
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.53 E-value=0.0022 Score=47.92 Aligned_cols=66 Identities=6% Similarity=-0.067 Sum_probs=47.9
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCc------------------eeeEEeeccccccccccccCCccccc
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNT------------------ANQISTMNIVSDRDSFVWKGHARLSV 69 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~------------------~~~~~~v~l~~~~es~~W~~~~~~~~ 69 (118)
|...|..|+++|. .+.|+.|+..|.|.+||..+.+ .+..+ .-...+.++.|..++++..
T Consensus 145 h~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~ 221 (377)
T 3dwl_C 145 LRSTILSLDWHPN-NVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALA 221 (377)
T ss_dssp CCSCEEEEEECTT-SSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEE
T ss_pred cCCCeEEEEEcCC-CCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEE
Confidence 6779999999996 8899999999999999875332 22111 1113456778888888877
Q ss_pred ccCCCCC
Q psy8836 70 KHTGDSK 76 (118)
Q Consensus 70 ~~~~d~~ 76 (118)
+.+.|+.
T Consensus 222 ~~~~d~~ 228 (377)
T 3dwl_C 222 YAGHDSS 228 (377)
T ss_dssp EEETTTE
T ss_pred EEeCCCc
Confidence 7776654
No 52
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.52 E-value=0.0045 Score=47.29 Aligned_cols=69 Identities=14% Similarity=0.195 Sum_probs=51.5
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
++.|.+.|..++++|. .+.|+.|+..|.|.|||..+.+....+... ...+.++.|...+++..+.+.|+
T Consensus 62 l~gH~~~V~~~~~sp~-~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h-~~~v~~~~~s~~g~~las~~~d~ 130 (380)
T 3iz6_a 62 LQGHSGKVYSLDWTPE-KNWIVSASQDGRLIVWNALTSQKTHAIKLH-CPWVMECAFAPNGQSVACGGLDS 130 (380)
T ss_dssp ECCCSSCEEEEEECTT-SSCEEEEETTSEEEEEETTTTEEEEEEECC-CTTCCCCEECTTSSEEEECCSSS
T ss_pred ccccccEEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCccceEEecC-CCCEEEEEECCCCCEEEEeeCCC
Confidence 3457889999999996 899999999999999999888776544432 12345667777777766655553
No 53
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.49 E-value=0.004 Score=48.38 Aligned_cols=69 Identities=16% Similarity=0.197 Sum_probs=47.0
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCce----e---eEEeeccccccccccccC-CcccccccCCCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTA----N---QISTMNIVSDRDSFVWKG-HARLSVKHTGDSK 76 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~----~---~~~~v~l~~~~es~~W~~-~~~~~~~~~~d~~ 76 (118)
.|...|..|+++|...+.|+.|+..|.|.+||..+... + ..+. .-...+.++.|+. ++.++.+...|++
T Consensus 179 ~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~s~~~dg~ 255 (430)
T 2xyi_A 179 GHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFT-GHTAVVEDVAWHLLHESLFGSVADDQK 255 (430)
T ss_dssp CCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEEC-CCSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred CCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeec-CCCCCEeeeEEeCCCCCEEEEEeCCCe
Confidence 36678999999998666999999999999999876321 1 1111 1113467788987 5666666665543
No 54
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.49 E-value=0.0087 Score=44.20 Aligned_cols=71 Identities=15% Similarity=0.168 Sum_probs=46.4
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeecccccccccccc--CCcccccccCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWK--GHARLSVKHTGDS 75 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~--~~~~~~~~~~~d~ 75 (118)
++.|...|..++++|.|.+.|+.|+..|.|.+||..+......+...-......+.|. .++++..+.+.|+
T Consensus 136 ~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~ 208 (304)
T 2ynn_A 136 FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDL 208 (304)
T ss_dssp ECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTS
T ss_pred hcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCC
Confidence 3456778999999998789999999999999999876654433322211122333443 3445555655554
No 55
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.47 E-value=0.0037 Score=46.68 Aligned_cols=65 Identities=12% Similarity=0.196 Sum_probs=52.9
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~ 72 (118)
+..|...|..++++|. .+.|+.|+..|.|.|||..+.+.+..+... ..+.++.|..++.......
T Consensus 192 ~~~h~~~v~~~~~sp~-g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 192 FIGHNSNINTLTASPD-GTLIASAGKDGEIMLWNLAAKKAMYTLSAQ--DEVFSLAFSPNRYWLAAAT 256 (319)
T ss_dssp ECCCCSCEEEEEECTT-SSEEEEEETTCEEEEEETTTTEEEEEEECC--SCEEEEEECSSSSEEEEEE
T ss_pred ecCCCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEEEecCC--CcEEEEEEcCCCCEEEEEc
Confidence 3446778999999996 889999999999999999999887666555 6777888988887765544
No 56
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.46 E-value=0.0049 Score=46.32 Aligned_cols=64 Identities=9% Similarity=0.034 Sum_probs=47.7
Q ss_pred cccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcc-cccccCCCC
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHAR-LSVKHTGDS 75 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~-~~~~~~~d~ 75 (118)
...|..++++|. .+.|++|+..|.|.+||...+.+ ..+... ...+.++.|...++ +..+.+.|+
T Consensus 163 ~~~v~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~-~~~~~h-~~~v~~~~~~~~~~~~l~s~~~d~ 227 (383)
T 3ei3_B 163 DYWYCCVDVSVS-RQMLATGDSTGRLLLLGLDGHEI-FKEKLH-KAKVTHAEFNPRCDWLMATSSVDA 227 (383)
T ss_dssp SCCEEEEEEETT-TTEEEEEETTSEEEEEETTSCEE-EEEECS-SSCEEEEEECSSCTTEEEEEETTS
T ss_pred CCCeEEEEECCC-CCEEEEECCCCCEEEEECCCCEE-EEeccC-CCcEEEEEECCCCCCEEEEEeCCC
Confidence 467999999997 89999999999999999854433 333321 15567888998888 666666564
No 57
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.45 E-value=0.0025 Score=49.45 Aligned_cols=69 Identities=10% Similarity=0.138 Sum_probs=54.1
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSKD 77 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~~ 77 (118)
.|.++|..++++|. .+.|+.|+..|.|.+||..+.+....+... ...+.++.|...+++..+.+.|++.
T Consensus 106 gh~~~V~~~~~~p~-~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h-~~~V~~v~~~~~~~~l~sgs~D~~i 174 (410)
T 1vyh_C 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGH-TDSVQDISFDHSGKLLASCSADMTI 174 (410)
T ss_dssp CCSSCEEEEEECSS-SSEEEEEESSSCEEEEETTTCCCCEEECCC-SSCEEEEEECTTSSEEEEEETTSCC
T ss_pred ccCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEEEEecc-CCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 36779999999996 889999999999999999888776554432 1345677898888888877777654
No 58
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.41 E-value=0.011 Score=45.59 Aligned_cols=64 Identities=22% Similarity=0.314 Sum_probs=49.4
Q ss_pred CCcccchhhhhCCCCCCeEEEEe--ecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGY--SKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg--~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~ 72 (118)
.+.++|..+++||.+.+.|.+|+ ..|.|.+||..+.+....+... ....+..|..+++..+..+
T Consensus 274 ~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~--~~v~~~~~~~~~~~lv~~s 339 (420)
T 4gga_A 274 QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH--SQVCSILWSPHYKELISGH 339 (420)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS--SCEEEEEEETTTTEEEEEE
T ss_pred ccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc--cceeeeeecCCCCeEEEEE
Confidence 35679999999999777777765 4599999999999887666655 6677778887777666543
No 59
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.37 E-value=0.0075 Score=44.90 Aligned_cols=67 Identities=7% Similarity=0.038 Sum_probs=45.3
Q ss_pred CcccchhhhhCCCCCC-eEEEEeecceEEEEeC----CCCc------eeeEEeecc---------ccccccccccCCccc
Q psy8836 8 NPGAVEAIAEQPGSPN-HIIVGYSKGLVVLWDR----TTNT------ANQISTMNI---------VSDRDSFVWKGHARL 67 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~-~LlIgg~~G~VVl~d~----~~~~------~~~~~~v~l---------~~~~es~~W~~~~~~ 67 (118)
|.+.|..|+++|. .+ .|++|+..|.|.+||. .+.+ ....+...+ ...+.++.|...+++
T Consensus 44 ~~~~v~~~~~s~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 122 (425)
T 1r5m_A 44 KLDNIVSSTWNPL-DESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNS 122 (425)
T ss_dssp ECSCCSEEEECSS-CTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSE
T ss_pred ccCceEEEEECCC-CCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCE
Confidence 4578999999998 55 8999999999999999 7776 222222211 025667788888888
Q ss_pred ccccCCCC
Q psy8836 68 SVKHTGDS 75 (118)
Q Consensus 68 ~~~~~~d~ 75 (118)
......|+
T Consensus 123 l~~~~~dg 130 (425)
T 1r5m_A 123 IVTGVENG 130 (425)
T ss_dssp EEEEETTS
T ss_pred EEEEeCCC
Confidence 77766554
No 60
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.36 E-value=0.0035 Score=47.14 Aligned_cols=69 Identities=13% Similarity=0.117 Sum_probs=52.4
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCC----CceeeEEeeccccccccccccC-CcccccccCCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTT----NTANQISTMNIVSDRDSFVWKG-HARLSVKHTGDSK 76 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~----~~~~~~~~v~l~~~~es~~W~~-~~~~~~~~~~d~~ 76 (118)
+.|.+.|..|+++|.....|+.|+..|.|.+||..+ ...+..+.-+ ..+.++.|.. .++...+.+.|+.
T Consensus 201 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~~l~~~~~d~~ 274 (383)
T 3ei3_B 201 KLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHE--KPVNAAYFNPTDSTKLLTTDQRNE 274 (383)
T ss_dssp ECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECS--SCEEEEEECTTTSCEEEEEESSSE
T ss_pred ccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCC--CceEEEEEcCCCCCEEEEEcCCCc
Confidence 346679999999998444899999999999999877 5555444433 6678889988 8888877766643
No 61
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.35 E-value=0.0017 Score=46.64 Aligned_cols=69 Identities=12% Similarity=-0.004 Sum_probs=48.8
Q ss_pred CCCcccchhhhhCCC-CCCeEEEEeecceEEEEeCCCCc---------eeeEEeeccccccccccccCC--cccccccCC
Q psy8836 6 KLNPGAVEAIAEQPG-SPNHIIVGYSKGLVVLWDRTTNT---------ANQISTMNIVSDRDSFVWKGH--ARLSVKHTG 73 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~-ds~~LlIgg~~G~VVl~d~~~~~---------~~~~~~v~l~~~~es~~W~~~--~~~~~~~~~ 73 (118)
+.|.++|..|+++|. |.+.|+.|+..|.|.+||..+.+ .+..+.. -...+.++.|... +.+..+...
T Consensus 54 ~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~ 132 (351)
T 3f3f_A 54 RAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLND-SKGSLYSVKFAPAHLGLKLACLGN 132 (351)
T ss_dssp ECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEET
T ss_pred ccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecc-cCCceeEEEEcCCCCCcEEEEecC
Confidence 346779999999996 58899999999999999887653 2222211 1144667788877 777766665
Q ss_pred CC
Q psy8836 74 DS 75 (118)
Q Consensus 74 d~ 75 (118)
|+
T Consensus 133 dg 134 (351)
T 3f3f_A 133 DG 134 (351)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 62
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.34 E-value=0.0043 Score=45.40 Aligned_cols=68 Identities=13% Similarity=0.149 Sum_probs=48.5
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
.|..+|..++++|. .+.|+.|+..|.|.+||..+.+.+..+...-...+..+.|...++.......|+
T Consensus 147 ~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~ 214 (312)
T 4ery_A 147 AHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 214 (312)
T ss_dssp CCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTT
T ss_pred CCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCC
Confidence 45678999999996 889999999999999999888776544322112345566777776665555443
No 63
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.34 E-value=0.0045 Score=46.19 Aligned_cols=70 Identities=17% Similarity=0.108 Sum_probs=54.5
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
|+.|-++|..++++|. .+.|+.|+..|.|.+||..+.+.+..+... ...+.++.|...+.+..+.+.|+.
T Consensus 61 ~~~h~~~v~~~~~s~d-g~~l~s~s~D~~v~~wd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~s~D~~ 130 (319)
T 3frx_A 61 FKGHSHIVQDCTLTAD-GAYALSASWDKTLRLWDVATGETYQRFVGH-KSDVMSVDIDKKASMIISGSRDKT 130 (319)
T ss_dssp EECCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECC-SSCEEEEEECTTSCEEEEEETTSC
T ss_pred EeCCcccEEEEEECCC-CCEEEEEeCCCEEEEEECCCCCeeEEEccC-CCcEEEEEEcCCCCEEEEEeCCCe
Confidence 4557789999999996 899999999999999999998877655422 144667788888887777776653
No 64
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.31 E-value=0.0044 Score=46.57 Aligned_cols=68 Identities=19% Similarity=0.153 Sum_probs=53.3
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
+.|...|..++++|. .+.|+.|+..|.|.+||..+.+.+..+... ...+.++.|..+++...+.+.|+
T Consensus 245 ~~h~~~v~~~~~sp~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h-~~~v~~v~~s~~g~~l~s~~~d~ 312 (321)
T 3ow8_A 245 SGHASWVLNVAFCPD-DTHFVSSSSDKSVKVWDVGTRTCVHTFFDH-QDQVWGVKYNGNGSKIVSVGDDQ 312 (321)
T ss_dssp CCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTC
T ss_pred cCCCCceEEEEECCC-CCEEEEEeCCCcEEEEeCCCCEEEEEEcCC-CCcEEEEEECCCCCEEEEEeCCC
Confidence 346678999999997 889999999999999999988876554321 24566788998888887777664
No 65
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.31 E-value=0.012 Score=44.59 Aligned_cols=71 Identities=15% Similarity=0.201 Sum_probs=51.7
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeec-cccccccccccCCcccccccCCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMN-IVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~-l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
++.|...|..++++|. .+.|+.|+..|.|.+||..+.+.+..+... ......++.|...+++..+...|++
T Consensus 236 ~~~h~~~v~~v~~~p~-~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~ 307 (354)
T 2pbi_B 236 FETHESDVNSVRYYPS-GDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYT 307 (354)
T ss_dssp ECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred ecCCCCCeEEEEEeCC-CCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCc
Confidence 3456778999999997 889999999999999999887665443322 1123456778888887777665643
No 66
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.29 E-value=0.0025 Score=46.61 Aligned_cols=67 Identities=7% Similarity=-0.003 Sum_probs=50.7
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCc----eeeEEeeccccccccccccCCcc-cccccCCCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNT----ANQISTMNIVSDRDSFVWKGHAR-LSVKHTGDSK 76 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~----~~~~~~v~l~~~~es~~W~~~~~-~~~~~~~d~~ 76 (118)
.|.++|..|+++|. .+.|++|+..|.|.+||..+.+ ......-+ ..+.++.|...++ ...+...|+.
T Consensus 9 ~h~~~v~~~~~s~~-~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~~~dg~ 80 (342)
T 1yfq_A 9 APKDYISDIKIIPS-KSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYK--HPLLCCNFIDNTDLQIYVGTVQGE 80 (342)
T ss_dssp CCSSCEEEEEEEGG-GTEEEEEETTSEEEEEEEETTTTEEEEEEEEECS--SCEEEEEEEESSSEEEEEEETTSC
T ss_pred CCCCcEEEEEEcCC-CCEEEEEcCCCeEEEEEeCCCCccccceeeeecC--CceEEEEECCCCCcEEEEEcCCCe
Confidence 36679999999996 8899999999999999887766 43333233 5677888988888 6666665543
No 67
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.28 E-value=0.0056 Score=46.99 Aligned_cols=67 Identities=10% Similarity=0.182 Sum_probs=51.3
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccC-CcccccccCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKG-HARLSVKHTGDS 75 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~-~~~~~~~~~~d~ 75 (118)
+.|.+.|..++++|. .++|+.|+..|.|.+||..+.+....+... ....++.|.. ++++..+.+.|+
T Consensus 162 ~~h~~~v~~~~~~p~-~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~s~d~ 229 (393)
T 1erj_A 162 QGHEQDIYSLDYFPS-GDKLVSGSGDRTVRIWDLRTGQCSLTLSIE--DGVTTVAVSPGDGKYIAAGSLDR 229 (393)
T ss_dssp CCCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECS--SCEEEEEECSTTCCEEEEEETTS
T ss_pred ccCCCCEEEEEEcCC-CCEEEEecCCCcEEEEECCCCeeEEEEEcC--CCcEEEEEECCCCCEEEEEcCCC
Confidence 446778999999997 889999999999999999888776555444 5566677765 666666655554
No 68
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.27 E-value=0.013 Score=43.82 Aligned_cols=67 Identities=13% Similarity=0.264 Sum_probs=46.3
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCC-------ceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTN-------TANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~-------~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
|.++|..|+++|. .+.|+.|+..|.|.|||.... +.+..+... ...+.++.|..++++..+.+.|++
T Consensus 57 h~~~v~~v~~sp~-~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h-~~~V~~v~~sp~g~~las~s~D~~ 130 (330)
T 2hes_X 57 HKKAIRSVAWRPH-TSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGH-ENEVKGVAWSNDGYYLATCSRDKS 130 (330)
T ss_dssp CCSCEEEEEECTT-SSEEEEEETTSCEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEEEETTSC
T ss_pred ccCCEEEEEECCC-CCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCC-CCcEEEEEECCCCCEEEEEeCCCE
Confidence 6678999999997 889999999999999987432 122222111 134567889988888887776653
No 69
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.27 E-value=0.004 Score=45.53 Aligned_cols=70 Identities=9% Similarity=-0.015 Sum_probs=48.3
Q ss_pred CCCcccchhhhhCCCCCCeEEEEe-e---cceEEEEeCCCCceeeEEeeccccccccccccCC---cccccccCCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGY-S---KGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGH---ARLSVKHTGDSK 76 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg-~---~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~---~~~~~~~~~d~~ 76 (118)
+.|.++|..|+++|. ..+|+++| . .|.|.+||..+.+........-...+.++.|... +++....+.|+.
T Consensus 15 ~~h~~~v~~~~~~p~-~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPC-SAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EECSSCEEEEEECTT-SSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred cCCCCceEEEEEcCC-CceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 347789999999997 55666555 3 7999999998887654433332256678888877 566666665543
No 70
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.26 E-value=0.0051 Score=46.00 Aligned_cols=41 Identities=12% Similarity=0.129 Sum_probs=36.2
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEe
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIST 49 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~ 49 (118)
|...|..++++|. .+.|+.|+..|.|.+||..+.+.+..+.
T Consensus 290 ~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 290 HSSWVMSLSFNDS-GETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp BSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred cCCcEEEEEECCC-CCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 5678999999996 8899999999999999999988876665
No 71
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.25 E-value=0.015 Score=45.84 Aligned_cols=70 Identities=10% Similarity=0.069 Sum_probs=53.3
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeecccc---ccccccccCC-cccccccCCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVS---DRDSFVWKGH-ARLSVKHTGDSK 76 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~---~~es~~W~~~-~~~~~~~~~d~~ 76 (118)
+.|...|..++++|.....|+.|+..|.|.+||..+.+.+..+... .. .+.++.|... +++..+.+.|+.
T Consensus 157 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 230 (615)
T 1pgu_A 157 SGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTH-HKQGSFVRDVEFSPDSGEFVITVGSDRK 230 (615)
T ss_dssp CSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSS-SCTTCCEEEEEECSTTCCEEEEEETTCC
T ss_pred ecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeeccc-CCCCceEEEEEECCCCCCEEEEEeCCCe
Confidence 4567789999999985458999999999999999888776554432 12 4667889888 887777665643
No 72
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.24 E-value=0.0033 Score=48.16 Aligned_cols=69 Identities=9% Similarity=0.021 Sum_probs=48.5
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCccc-ccccCCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARL-SVKHTGDSK 76 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~-~~~~~~d~~ 76 (118)
+.|..+|..|+++|...+.|+.|+..|.|.|||..+.+.....--. ..+.++.|+.+++. ..+.+.|++
T Consensus 254 ~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~--~~V~~v~~sp~~~~llas~s~D~~ 323 (344)
T 4gqb_B 254 AVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHR--DFVRDATWSPLNHSLLTTVGWDHQ 323 (344)
T ss_dssp ECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCS--SCEEEEEECSSSTTEEEEEETTSC
T ss_pred cCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCC--CCEEEEEEeCCCCeEEEEEcCCCe
Confidence 4467799999999973345667888899999999988875321112 44667889877764 445555654
No 73
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.23 E-value=0.017 Score=44.90 Aligned_cols=41 Identities=12% Similarity=0.081 Sum_probs=35.4
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEe
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIST 49 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~ 49 (118)
.|.+.|..|+++ |.+.|+.|+..|.|.+||..+.+.+..+.
T Consensus 239 ~h~~~v~~~~~s--d~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 279 (450)
T 2vdu_B 239 GHKHFVSSICCG--KDYLLLSAGGDDKIFAWDWKTGKNLSTFD 279 (450)
T ss_dssp CCSSCEEEEEEC--STTEEEEEESSSEEEEEETTTCCEEEEEE
T ss_pred CCCCceEEEEEC--CCCEEEEEeCCCeEEEEECCCCcEeeeec
Confidence 466789999999 69999999999999999999988776554
No 74
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.13 E-value=0.0081 Score=45.04 Aligned_cols=69 Identities=16% Similarity=0.087 Sum_probs=52.8
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
+.|-..|..++++|. ...|+.|+..|.|.+||..+.+.+..+... ...+.++.|..+++...+.+.|++
T Consensus 73 ~~h~~~V~~~~~~~~-~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h-~~~v~~v~~sp~~~~l~s~~~d~~ 141 (343)
T 2xzm_R 73 TGHNHFVSDLALSQE-NCFAISSSWDKTLRLWDLRTGTTYKRFVGH-QSEVYSVAFSPDNRQILSAGAERE 141 (343)
T ss_dssp CCCSSCEEEEEECSS-TTEEEEEETTSEEEEEETTSSCEEEEEECC-CSCEEEEEECSSTTEEEEEETTSC
T ss_pred ccCCCceEEEEECCC-CCEEEEEcCCCcEEEEECCCCcEEEEEcCC-CCcEEEEEECCCCCEEEEEcCCCE
Confidence 346678999999996 888899999999999999988776554422 144667889888887776665643
No 75
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.13 E-value=0.012 Score=46.51 Aligned_cols=67 Identities=18% Similarity=0.182 Sum_probs=49.1
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
+.|.++|..|+++|. .+.|+.|+..|.|.|||...+ .+..+... ...+.++.|..+++...+...|+
T Consensus 54 ~gh~~~V~~l~fspd-g~~las~~~d~~i~vWd~~~~-~~~~~~~~-~~~v~~~~~s~d~~~l~~~~~d~ 120 (577)
T 2ymu_A 54 TGHSSSVWGVAFSPD-GQTIASASDDKTVKLWNRNGQ-LLQTLTGH-SSSVRGVAFSPDGQTIASASDDK 120 (577)
T ss_dssp ECCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTSC-EEEEECCC-SSCEEEEEECTTSSEEEEEETTS
T ss_pred eCCCCCEEEEEECCC-CCEEEEEeCCCEEEEEECCCC-EEEEEECC-CCCEEEEEECCCCCEEEEEcCCC
Confidence 447789999999996 889999999999999996544 44333321 14456778888888877666554
No 76
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.10 E-value=0.0069 Score=43.40 Aligned_cols=67 Identities=16% Similarity=0.159 Sum_probs=50.6
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
+.|.+.|..|+++|. . +|+.|+..|.|.+||..+.+.+..+... ...+.++.|..++++.. ...|++
T Consensus 222 ~~~~~~i~~~~~~~~-~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~-~~~dg~ 288 (313)
T 3odt_A 222 EGHESFVYCIKLLPN-G-DIVSCGEDRTVRIWSKENGSLKQVITLP-AISIWSVDCMSNGDIIV-GSSDNL 288 (313)
T ss_dssp ECCSSCEEEEEECTT-S-CEEEEETTSEEEEECTTTCCEEEEEECS-SSCEEEEEECTTSCEEE-EETTSC
T ss_pred hcCCceEEEEEEecC-C-CEEEEecCCEEEEEECCCCceeEEEecc-CceEEEEEEccCCCEEE-EeCCCc
Confidence 346678999999997 4 7999999999999999998877665544 13567788988888544 444543
No 77
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.02 E-value=0.0025 Score=46.56 Aligned_cols=54 Identities=11% Similarity=0.089 Sum_probs=40.4
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCC---------CceeeEEeeccccccccccccCCc
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTT---------NTANQISTMNIVSDRDSFVWKGHA 65 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~---------~~~~~~~~v~l~~~~es~~W~~~~ 65 (118)
|.+.|..|+++| .+.|+.|+..|.|.+||..+ .+.+..+... ..+.++.|..++
T Consensus 100 ~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~ 162 (342)
T 1yfq_A 100 ANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVK--NKIFTMDTNSSR 162 (342)
T ss_dssp CCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSC--CCEEEEEECSSE
T ss_pred CCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeC--CceEEEEecCCc
Confidence 677899999999 78999999999999998766 4443332322 556677787666
No 78
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=96.00 E-value=0.006 Score=46.35 Aligned_cols=66 Identities=15% Similarity=0.166 Sum_probs=49.4
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCce----eeEEeecccc-------------ccccccccCCccc
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTA----NQISTMNIVS-------------DRDSFVWKGHARL 67 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~----~~~~~v~l~~-------------~~es~~W~~~~~~ 67 (118)
+..|...|..++++|...+.|+.|+..|.|.+||..+.+. +..+... . .+.++.|...+++
T Consensus 222 ~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~s~~g~~ 299 (447)
T 3dw8_B 222 MEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEP--EDPSNRSFFSEIISSISDVKFSHSGRY 299 (447)
T ss_dssp GGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-------CCHHHHHTTCEEEEEECTTSSE
T ss_pred ccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccC--CCccccccccccCceEEEEEECCCCCE
Confidence 4457778999999998448999999999999999887765 4444433 2 4667788888877
Q ss_pred ccccC
Q psy8836 68 SVKHT 72 (118)
Q Consensus 68 ~~~~~ 72 (118)
..+.+
T Consensus 300 l~~~~ 304 (447)
T 3dw8_B 300 MMTRD 304 (447)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 65544
No 79
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.98 E-value=0.0049 Score=50.76 Aligned_cols=67 Identities=15% Similarity=0.016 Sum_probs=53.4
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
.|.+.|..++++|. .+.|++|+..|.|.+||..+.+.+..+... ...+.++.|+.+++...+.+.|+
T Consensus 53 ~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg 119 (814)
T 3mkq_A 53 VTETPVRAGKFIAR-KNWIIVGSDDFRIRVFNYNTGEKVVDFEAH-PDYIRSIAVHPTKPYVLSGSDDL 119 (814)
T ss_dssp CCSSCEEEEEEEGG-GTEEEEEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEECSSSSEEEEEETTS
T ss_pred cCCCcEEEEEEeCC-CCEEEEEeCCCeEEEEECCCCcEEEEEecC-CCCEEEEEEeCCCCEEEEEcCCC
Confidence 46789999999996 899999999999999999888877655422 14467788998888777666554
No 80
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.97 E-value=0.024 Score=43.40 Aligned_cols=63 Identities=17% Similarity=0.239 Sum_probs=49.4
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
.|..++++|. .+.|+.|+..|.|.|||..+.+.+..+... ...+.++.|..+++...+.+.|+
T Consensus 125 ~v~~v~~s~d-g~~l~s~~~d~~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~p~~~~l~s~s~d~ 187 (393)
T 1erj_A 125 YIRSVCFSPD-GKFLATGAEDRLIRIWDIENRKIVMILQGH-EQDIYSLDYFPSGDKLVSGSGDR 187 (393)
T ss_dssp BEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTS
T ss_pred eEEEEEECCC-CCEEEEEcCCCeEEEEECCCCcEEEEEccC-CCCEEEEEEcCCCCEEEEecCCC
Confidence 4889999996 889999999999999999988776544322 13466788988888877777664
No 81
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.94 E-value=0.011 Score=44.78 Aligned_cols=68 Identities=16% Similarity=0.118 Sum_probs=49.9
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
+.|.++|..++++|. .+.|+.|+..|.|.+||..+.+....+... ...+.++.|...++...+.+.|+
T Consensus 61 ~gH~~~V~~~~~s~d-~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~-~~~v~~~~~sp~g~~lasg~~d~ 128 (354)
T 2pbi_B 61 KGHGNKVLCMDWCKD-KRRIVSSSQDGKVIVWDSFTTNKEHAVTMP-CTWVMACAYAPSGCAIACGGLDN 128 (354)
T ss_dssp ECCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECS-SSCCCEEEECTTSSEEEEESTTS
T ss_pred cCCCCeEEEEEECCC-CCEEEEEeCCCeEEEEECCCCCcceEEecC-CCCEEEEEECCCCCEEEEeeCCC
Confidence 457889999999996 899999999999999998777665443322 12345666777777766665553
No 82
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=95.83 E-value=0.0049 Score=47.14 Aligned_cols=71 Identities=15% Similarity=0.270 Sum_probs=50.2
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCC---Ccee-eEEeeccccccccccccCCcccccccCCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTT---NTAN-QISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~---~~~~-~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
+.|.++|..|+++|.|.+.|+.|+..|.|.|||..+ .... ......-...+.++.|...++...+.+.|+.
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~ 134 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQ 134 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCE
Confidence 457789999999995488999999999999998755 3211 0111111256778889888887777766653
No 83
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.83 E-value=0.018 Score=42.33 Aligned_cols=69 Identities=13% Similarity=0.203 Sum_probs=46.4
Q ss_pred CCCcccchhhhhCC-CCCCeEEEEeecceEEEEeCCCCce--eeEEeeccccccccccccCC--cccccccCCCC
Q psy8836 6 KLNPGAVEAIAEQP-GSPNHIIVGYSKGLVVLWDRTTNTA--NQISTMNIVSDRDSFVWKGH--ARLSVKHTGDS 75 (118)
Q Consensus 6 ~~~p~aV~~I~~cP-~ds~~LlIgg~~G~VVl~d~~~~~~--~~~~~v~l~~~~es~~W~~~--~~~~~~~~~d~ 75 (118)
+.|.++|..|+++| .+.+.|+.|+..|.|.|||..+.+. +..+... ...+.++.|..+ +++..+.+.|+
T Consensus 50 ~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~g~~l~s~s~d~ 123 (297)
T 2pm7_B 50 TGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVH-SASVNSVQWAPHEYGPMLLVASSDG 123 (297)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCC-SSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecC-CCceeEEEeCcCCCCcEEEEEECCC
Confidence 44778999999975 3467788888999999999877642 2111111 134567788765 66666666554
No 84
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.81 E-value=0.013 Score=49.44 Aligned_cols=71 Identities=18% Similarity=0.224 Sum_probs=50.4
Q ss_pred CCCcccchhhhhCCC-CCCeEEEEeecceEEEEeCCCCceeeEEeec-cccccccccccCC--cccccccCCCCC
Q psy8836 6 KLNPGAVEAIAEQPG-SPNHIIVGYSKGLVVLWDRTTNTANQISTMN-IVSDRDSFVWKGH--ARLSVKHTGDSK 76 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~-ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~-l~~~~es~~W~~~--~~~~~~~~~d~~ 76 (118)
+.|.++|..|+++|. +.+.|+.|+..|.|.+||..+.+........ -...+.++.|..+ +....+.+.|+.
T Consensus 50 ~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~ 124 (753)
T 3jro_A 50 TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGK 124 (753)
T ss_dssp CCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSE
T ss_pred cCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCc
Confidence 457789999999874 3788999999999999998887532111111 1145677889887 777777776653
No 85
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.80 E-value=0.015 Score=44.99 Aligned_cols=70 Identities=13% Similarity=0.120 Sum_probs=52.6
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
++.|.+.|..++++|. .+.|+.|+..|.|.+||..+...+..+... ...+.++.|..++++..+.+.|+.
T Consensus 188 ~~~h~~~V~~v~~~p~-~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h-~~~v~~~~~~~~g~~l~s~s~D~~ 257 (410)
T 1vyh_C 188 MHGHDHNVSSVSIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGH-REWVRMVRPNQDGTLIASCSNDQT 257 (410)
T ss_dssp CCCCSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEECTTSSEEEEEETTSC
T ss_pred EcCCCCCEEEEEEeCC-CCEEEEEeCCCeEEEEECCCCcEEEEEeCC-CccEEEEEECCCCCEEEEEcCCCe
Confidence 3456779999999997 889999999999999999888776554422 123456677777887777766653
No 86
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.75 E-value=0.013 Score=45.46 Aligned_cols=65 Identities=3% Similarity=0.031 Sum_probs=47.6
Q ss_pred ccchhhhhCCCCCCeE-EEEeecceEEEEeCC--CCceeeEEee-ccccccccccccCCcccccccCCCC
Q psy8836 10 GAVEAIAEQPGSPNHI-IVGYSKGLVVLWDRT--TNTANQISTM-NIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~L-lIgg~~G~VVl~d~~--~~~~~~~~~v-~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
++|..++++|. .+.| +.|+..|.|.+||.. +.+.+..+.. .....+.++.|...++.......|+
T Consensus 103 ~~v~~~~~s~d-~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g 171 (450)
T 2vdu_B 103 SYIRNLRLTSD-ESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFG 171 (450)
T ss_dssp CCEEEEEECTT-SSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred CceEEEEEcCC-CCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCC
Confidence 37999999997 7775 677788999999988 6766655432 1114566888998888777666554
No 87
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.69 E-value=0.011 Score=44.01 Aligned_cols=66 Identities=17% Similarity=0.287 Sum_probs=47.4
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
|.+.|..|+++|. .+.|++|+..|.|.+||. +.+.+..+... ...+.++.|...++.......|+.
T Consensus 107 ~~~~v~~~~~s~~-~~~l~~~~~dg~i~i~~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~ 172 (425)
T 1r5m_A 107 TTNQVTCLAWSHD-GNSIVTGVENGELRLWNK-TGALLNVLNFH-RAPIVSVKWNKDGTHIISMDVENV 172 (425)
T ss_dssp -CBCEEEEEECTT-SSEEEEEETTSCEEEEET-TSCEEEEECCC-CSCEEEEEECTTSSEEEEEETTCC
T ss_pred CCCceEEEEEcCC-CCEEEEEeCCCeEEEEeC-CCCeeeeccCC-CccEEEEEECCCCCEEEEEecCCe
Confidence 4559999999996 899999999999999994 44443333311 145677889888887766665543
No 88
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.63 E-value=0.012 Score=49.56 Aligned_cols=71 Identities=7% Similarity=-0.036 Sum_probs=49.0
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCC--ceeeEEeeccccccccccccCC--cccccccCCCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTN--TANQISTMNIVSDRDSFVWKGH--ARLSVKHTGDSKD 77 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~--~~~~~~~v~l~~~~es~~W~~~--~~~~~~~~~d~~~ 77 (118)
++.|.++|..|+++|. .+.|+.|+..|.|.+||..+. +.+..+... ...+.++.|... +....+.+.|+..
T Consensus 5 l~gH~~~V~~l~~s~d-g~~latg~~dg~I~vwd~~~~~~~~~~~l~~h-~~~V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 5 ANAHNELIHDAVLDYY-GKRLATCSSDKTIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp ---CCCCEEEECCCSS-SCCEEEEETTTEEEEEEEETTEEEEEEEECCC-SSCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred cccCcceeEEEEECCC-CCeEEEEECCCcEEEEecCCCCCccceeccCC-cCceEEEEecCCCCCCEEEEEeCCCeE
Confidence 4568899999999996 889999999999999987633 333222211 134567788665 7777777766543
No 89
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.62 E-value=0.028 Score=41.25 Aligned_cols=69 Identities=7% Similarity=-0.003 Sum_probs=47.5
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCC--ceeeEEeeccccccccccccC--CcccccccCCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTN--TANQISTMNIVSDRDSFVWKG--HARLSVKHTGDSK 76 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~--~~~~~~~v~l~~~~es~~W~~--~~~~~~~~~~d~~ 76 (118)
..|.+.|..++++|. .++|+.|+..|.|.|||..+. +.+..+... ...+.++.|.. .++...+.+.|++
T Consensus 6 ~~h~~~V~~~~~s~~-g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH-~~~V~~v~~s~~~~g~~l~s~s~D~~ 78 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYY-GKRMATCSSDKTIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSYDGK 78 (297)
T ss_dssp CSCSSCEEEEEECTT-SSEEEEEETTSCEEEEEBCSSCBCCCEEECCC-SSCEEEEEECCGGGCSEEEEEETTTE
T ss_pred cCCcCceEEEEECCC-CCEEEEEeCCCEEEEEecCCCCcEEEEEEccc-cCCeEEEEecCCCcCCEEEEEcCCCE
Confidence 457789999999996 889999999999999987643 333332211 13455677853 3666666666653
No 90
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=95.55 E-value=0.019 Score=49.83 Aligned_cols=94 Identities=13% Similarity=0.019 Sum_probs=60.0
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCCCCCCcccccee
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSKDKEPSKALLKS 87 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~~~~p~k~~~~~ 87 (118)
|+..|..|+++|. .+.|++|+..|.|.|||..+.+....+.-. ..+.++.|.. +++..+.+.|++..+ -.
T Consensus 16 h~~~V~~lafspd-g~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~--~~V~~l~fsp-g~~L~S~s~D~~v~l------Wd 85 (902)
T 2oaj_A 16 MSSKPIAAAFDFT-QNLLAIATVTGEVHIYGQQQVEVVIKLEDR--SAIKEMRFVK-GIYLVVINAKDTVYV------LS 85 (902)
T ss_dssp CSSCEEEEEEETT-TTEEEEEETTSEEEEECSTTCEEEEECSSC--CCEEEEEEET-TTEEEEEETTCEEEE------EE
T ss_pred CCCCcEEEEECCC-CCEEEEEeCCCEEEEEeCCCcEEEEEcCCC--CCEEEEEEcC-CCEEEEEECcCeEEE------EE
Confidence 6789999999997 899999999999999998776654332222 4466777877 775565555542210 00
Q ss_pred eCCCCCCeeeeeecCChheeeeeeccc
Q psy8836 88 VSPGFQPTCLVQLHPPAAVTSLVLHTE 114 (118)
Q Consensus 88 ~p~G~Q~~~v~q~~Pp~~ITala~~s~ 114 (118)
...| +.+..+..+..||+++++..
T Consensus 86 ~~~~---~~~~~~~~~~~V~~v~~sp~ 109 (902)
T 2oaj_A 86 LYSQ---KVLTTVFVPGKITSIDTDAS 109 (902)
T ss_dssp TTTC---SEEEEEECSSCEEEEECCTT
T ss_pred CCCC---cEEEEEcCCCCEEEEEECCC
Confidence 0011 12222234567888887653
No 91
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=95.51 E-value=0.015 Score=47.85 Aligned_cols=68 Identities=18% Similarity=0.171 Sum_probs=53.3
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
.|.+.|..++++|. .+.|+.|+..|.|.|||..+.+....+... ...+.++.|..+++...+.+.|++
T Consensus 428 ~h~~~v~~v~~s~~-g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~D~~ 495 (694)
T 3dm0_A 428 GHSHFVEDVVLSSD-GQFALSGSWDGELRLWDLAAGVSTRRFVGH-TKDVLSVAFSLDNRQIVSASRDRT 495 (694)
T ss_dssp CCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECC-SSCEEEEEECTTSSCEEEEETTSC
T ss_pred CCCCcEEEEEECCC-CCEEEEEeCCCcEEEEECCCCcceeEEeCC-CCCEEEEEEeCCCCEEEEEeCCCE
Confidence 46778999999996 889999999999999999888776554422 144677889888888777776653
No 92
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=95.44 E-value=0.015 Score=45.88 Aligned_cols=67 Identities=18% Similarity=0.187 Sum_probs=49.7
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
..|..+|..|+++|. .+.|+.|+..|.|.|||.. .+.+..+... ...+.++.|..++++.++.+.|+
T Consensus 505 ~~h~~~v~~l~~s~d-g~~l~s~~~dg~v~lwd~~-~~~~~~~~~h-~~~v~~~~fs~dg~~l~s~~~D~ 571 (577)
T 2ymu_A 505 TGHSSSVRGVAFSPD-GQTIASASDDKTVKLWNRN-GQLLQTLTGH-SSSVWGVAFSPDGQTIASASSDK 571 (577)
T ss_dssp ECCSSCEEEEEECTT-SSCEEEEETTSEEEEECTT-SCEEEEEECC-SSCEEEEEECTTSSCEEEEETTS
T ss_pred eCCCCCEEEEEEcCC-CCEEEEEECcCEEEEEeCC-CCEEEEEcCC-CCCEEEEEEcCCCCEEEEEeCCC
Confidence 346678999999996 8899999999999999964 4444444321 14456778888888888777664
No 93
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=95.41 E-value=0.016 Score=43.37 Aligned_cols=62 Identities=13% Similarity=0.191 Sum_probs=45.4
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCC-CCceeeEEeeccccccccccccCCcccccc
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRT-TNTANQISTMNIVSDRDSFVWKGHARLSVK 70 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~-~~~~~~~~~v~l~~~~es~~W~~~~~~~~~ 70 (118)
+.|...|..|+++|. .+.|+.|+..|.|.+||.. .......+... ..+.++.|+..+++...
T Consensus 210 ~~h~~~v~~~~~s~~-g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~--~~v~~v~~sp~~~~la~ 272 (343)
T 2xzm_R 210 KAHESNVNHLSISPN-GKYIATGGKDKKLLIWDILNLTYPQREFDAG--STINQIAFNPKLQWVAV 272 (343)
T ss_dssp ECCSSCEEEEEECTT-SSEEEEEETTCEEEEEESSCCSSCSEEEECS--SCEEEEEECSSSCEEEE
T ss_pred cCccccceEEEECCC-CCEEEEEcCCCeEEEEECCCCcccceeecCC--CcEEEEEECCCCCEEEE
Confidence 346778999999996 8899999999999999984 33333333333 45677888887766543
No 94
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.34 E-value=0.016 Score=43.40 Aligned_cols=69 Identities=12% Similarity=0.172 Sum_probs=46.1
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCC----ceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTN----TANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~----~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
+.|.++|..++++|. .+.|+.|+..|.|.+||.... +.+..+... ...+.++.|+..+.+..+.+.|+.
T Consensus 104 ~~h~~~V~~v~~sp~-g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~D~~ 176 (330)
T 2hes_X 104 EGHENEVKGVAWSND-GYYLATCSRDKSVWIWETDESGEEYECISVLQEH-SQDVKHVIWHPSEALLASSSYDDT 176 (330)
T ss_dssp C----CEEEEEECTT-SCEEEEEETTSCEEEEECCTTCCCCEEEEEECCC-SSCEEEEEECSSSSEEEEEETTSC
T ss_pred cCCCCcEEEEEECCC-CCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccC-CCceEEEEECCCCCEEEEEcCCCe
Confidence 346778999999996 889999999999999998432 222222211 144667788888888777776653
No 95
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.25 E-value=0.014 Score=43.55 Aligned_cols=63 Identities=3% Similarity=-0.023 Sum_probs=48.2
Q ss_pred cccchhhhhCCCCCCeEEEEeecceEEEEeCCCCcee-eEEeeccccccccccccCCcccccccC
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTAN-QISTMNIVSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~-~~~~v~l~~~~es~~W~~~~~~~~~~~ 72 (118)
...|..++++|. ...|+.|+..|.|.+||..+.+.+ ..+...-...+.++.|..++....+.+
T Consensus 170 ~~~i~~~~~~pd-g~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~ 233 (343)
T 3lrv_A 170 DVEYSSGVLHKD-SLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC 233 (343)
T ss_dssp SCCCCEEEECTT-SCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE
T ss_pred CCceEEEEECCC-CCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe
Confidence 447999999996 888889999999999999888765 444441125567888988888776655
No 96
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=95.21 E-value=0.015 Score=44.42 Aligned_cols=67 Identities=16% Similarity=0.251 Sum_probs=48.6
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeecccccccccc----ccCCcccccccCCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFV----WKGHARLSVKHTGDS 75 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~----W~~~~~~~~~~~~d~ 75 (118)
|.+.|..++++|. .+.|+.|+..|.|.+||..+.+.+..+...-...+.++. |..++++..+.+.|+
T Consensus 213 h~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg 283 (437)
T 3gre_A 213 RHGAVSSICIDEE-CCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKT 283 (437)
T ss_dssp GGCCEEEEEECTT-SCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTE
T ss_pred CCCceEEEEECCC-CCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCC
Confidence 4568999999997 899999999999999999988777655432113455663 444566666666554
No 97
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=95.14 E-value=0.024 Score=43.01 Aligned_cols=63 Identities=10% Similarity=0.158 Sum_probs=45.6
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCC-CceeeEEeeccccccc----------------cccccCCcccccccC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTT-NTANQISTMNIVSDRD----------------SFVWKGHARLSVKHT 72 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~-~~~~~~~~v~l~~~~e----------------s~~W~~~~~~~~~~~ 72 (118)
+.|..|+++|. .+.|+.|+. |.|.+||..+ .+.+..+... .... ++.|...++...+.+
T Consensus 286 ~~v~~~~~s~~-g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s 361 (447)
T 3dw8_B 286 SSISDVKFSHS-GRYMMTRDY-LSVKVWDLNMENRPVETYQVH--EYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGS 361 (447)
T ss_dssp TCEEEEEECTT-SSEEEEEES-SEEEEEETTCCSSCSCCEESC--GGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEEC
T ss_pred ceEEEEEECCC-CCEEEEeeC-CeEEEEeCCCCccccceeecc--ccccccccccccccccccceEEEECCCCCEEEEec
Confidence 38999999995 777777777 9999999986 6655554433 3222 277988888777766
Q ss_pred CCCC
Q psy8836 73 GDSK 76 (118)
Q Consensus 73 ~d~~ 76 (118)
.|+.
T Consensus 362 ~dg~ 365 (447)
T 3dw8_B 362 YNNF 365 (447)
T ss_dssp STTE
T ss_pred cCCE
Confidence 6653
No 98
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.06 E-value=0.023 Score=42.20 Aligned_cols=71 Identities=17% Similarity=0.162 Sum_probs=46.9
Q ss_pred CCCCcccchhhhhCC-CCCCeEEEEeecceEEEEeCCCCceeeEEeec-cccccccccccCC--cccccccCCCC
Q psy8836 5 YKLNPGAVEAIAEQP-GSPNHIIVGYSKGLVVLWDRTTNTANQISTMN-IVSDRDSFVWKGH--ARLSVKHTGDS 75 (118)
Q Consensus 5 y~~~p~aV~~I~~cP-~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~-l~~~~es~~W~~~--~~~~~~~~~d~ 75 (118)
++.|.++|..|+++| .+.+.|+.|+..|.|.+||..+.+........ -...+.++.|..+ +.+..+...|+
T Consensus 53 l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~ 127 (316)
T 3bg1_A 53 LRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG 127 (316)
T ss_dssp EECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS
T ss_pred EcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC
Confidence 345778999999975 45778888999999999998776422111111 1144667788765 55655555554
No 99
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.00 E-value=0.031 Score=41.46 Aligned_cols=71 Identities=18% Similarity=0.236 Sum_probs=49.0
Q ss_pred CCCCcccchhhhhCCCC---CCeEEEEeecceEEEEeCCCC---c-eeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGS---PNHIIVGYSKGLVVLWDRTTN---T-ANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~d---s~~LlIgg~~G~VVl~d~~~~---~-~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
++.|...|..++++|.. .+.|+.|+..|.|.|||..+. + ....+. .....+.++.|...++...+.+.|+.
T Consensus 208 l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~-~~~~~v~~v~~sp~g~~las~~~D~~ 285 (316)
T 3bg1_A 208 LEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLH-KFNDVVWHVSWSITANILAVSGGDNK 285 (316)
T ss_dssp CBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEE-ECSSCEEEEEECTTTCCEEEEESSSC
T ss_pred cccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhh-cCCCcEEEEEEcCCCCEEEEEcCCCe
Confidence 34577789999999973 367888999999999987652 1 111111 11145667889998888877776653
No 100
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=94.99 E-value=0.027 Score=40.46 Aligned_cols=66 Identities=17% Similarity=0.144 Sum_probs=49.4
Q ss_pred CcccchhhhhCCCCCCeEEEEe--ecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGY--SKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg--~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
+...|..+.++|. .+.++++. ..|.|.+||..+.+.+..+... ...+.++.|+.++++..+.+.|+
T Consensus 239 ~~~~v~~~~~~~~-~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH-~~~V~~l~~spdg~~l~S~s~D~ 306 (318)
T 4ggc_A 239 AHSQVCSILWSPH-YKELISGHGFAQNQLVIWKYPTMAKVAELKGH-TSRVLSLTMSPDGATVASAAADE 306 (318)
T ss_dssp CSSCEEEEEEETT-TTEEEEEECTTTCCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSCEEEEETTT
T ss_pred ceeeeeeeeeccc-ccceEEEEEcCCCEEEEEECCCCcEEEEEcCC-CCCEEEEEEcCCCCEEEEEecCC
Confidence 3456788889997 66666654 5799999999998887665532 14567888999999888877675
No 101
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=94.92 E-value=0.021 Score=46.59 Aligned_cols=69 Identities=12% Similarity=0.141 Sum_probs=52.3
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEee------ccccccccccccCCcccccccCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTM------NIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v------~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
+.|...|..++++|. .+.|+.|+..|.|.|||..+.+.+..+.. .-...+.++.|..+++...+.+.|+
T Consensus 187 ~~H~~~V~~v~fspd-g~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~ 261 (611)
T 1nr0_A 187 GEHTKFVHSVRYNPD-GSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK 261 (611)
T ss_dssp CCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTS
T ss_pred ccccCceEEEEECCC-CCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCC
Confidence 446778999999996 88999999999999999887776544421 1113456788988888887777665
No 102
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=94.81 E-value=0.04 Score=39.49 Aligned_cols=40 Identities=23% Similarity=0.204 Sum_probs=34.0
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEE
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIS 48 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~ 48 (118)
|...|..++++|. .+.|+.|+..|.|.+||..+.+.+..+
T Consensus 66 ~~~~V~~v~~~~~-~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 66 PGEYISSVAWIKE-GNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp TTCCEEEEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CCCeEEEEEECCC-CCEEEEEECCCcEEEeecCCceeEEEe
Confidence 4568999999997 899999999999999999888766443
No 103
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=94.79 E-value=0.083 Score=40.27 Aligned_cols=61 Identities=8% Similarity=0.055 Sum_probs=46.8
Q ss_pred cchhhhhCCCCCCeEEEEee--cceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCC
Q psy8836 11 AVEAIAEQPGSPNHIIVGYS--KGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~--~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d 74 (118)
.|..+++.|. .+.|++|+. .|.|-|||..+.+.+..+.-. .++.++.|..++++..+...+
T Consensus 135 ~~~~v~fSpD-g~~la~as~~~d~~i~iwd~~~~~~~~~~~~~--~~V~~v~fspdg~~l~s~s~~ 197 (365)
T 4h5i_A 135 YTKLVYISRE-GTVAAIASSKVPAIMRIIDPSDLTEKFEIETR--GEVKDLHFSTDGKVVAYITGS 197 (365)
T ss_dssp CEEEEEECTT-SSCEEEEESCSSCEEEEEETTTTEEEEEEECS--SCCCEEEECTTSSEEEEECSS
T ss_pred CEEEEEEcCC-CCEEEEEECCCCCEEEEeECCCCcEEEEeCCC--CceEEEEEccCCceEEeccce
Confidence 3667888996 788888774 489999999998877655544 678889999999887665533
No 104
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=94.70 E-value=0.03 Score=43.02 Aligned_cols=68 Identities=16% Similarity=0.183 Sum_probs=47.5
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeecccccccccccc--CCcccccccCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWK--GHARLSVKHTGDS 75 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~--~~~~~~~~~~~d~ 75 (118)
++.|.++|..++++|. . .|+.|+..|.|.+||..+.+.+..+... ...+.++.|. ..++...+.+.|+
T Consensus 158 ~~~h~~~V~~l~~~~~-~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h-~~~v~~l~~~~~~~~~~l~s~s~d~ 227 (464)
T 3v7d_B 158 LSGHDGGVWALKYAHG-G-ILVSGSTDRTVRVWDIKKGCCTHVFEGH-NSTVRCLDIVEYKNIKYIVTGSRDN 227 (464)
T ss_dssp ECCCSSCEEEEEECST-T-EEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEEEESSSCEEEEEEETTS
T ss_pred EeCCCcCEEEEEEcCC-C-EEEEEeCCCCEEEEECCCCcEEEEECCC-CCccEEEEEecCCCCCEEEEEcCCC
Confidence 3457789999999986 3 9999999999999999888776554421 1344555565 4445555555454
No 105
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=94.69 E-value=0.1 Score=40.08 Aligned_cols=64 Identities=19% Similarity=0.214 Sum_probs=43.0
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
+.|.++|..+++ |.+.|++|+..|.|.+||..+.+.+..+... ...+.++.|. +....+.+.|+
T Consensus 170 ~~h~~~v~~l~~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h-~~~v~~l~~~--~~~l~s~s~dg 233 (435)
T 1p22_A 170 TGHTGSVLCLQY---DERVIITGSSDSTVRVWDVNTGEMLNTLIHH-CEAVLHLRFN--NGMMVTCSKDR 233 (435)
T ss_dssp CCCSSCEEEEEC---CSSEEEEEETTSCEEEEESSSCCEEEEECCC-CSCEEEEECC--TTEEEEEETTS
T ss_pred cCCCCcEEEEEE---CCCEEEEEcCCCeEEEEECCCCcEEEEEcCC-CCcEEEEEEc--CCEEEEeeCCC
Confidence 346678888887 4789999999999999999888776554322 1334556664 33445555454
No 106
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.62 E-value=0.02 Score=47.13 Aligned_cols=63 Identities=19% Similarity=0.218 Sum_probs=48.6
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCccccccc
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKH 71 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~ 71 (118)
+.|.+.|..|+++|. .+.|+.|+..|.|.+||..+.+.+..+..+ ..+.++.|..++.+....
T Consensus 558 ~~h~~~v~~v~~spd-g~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~sp~~~~l~~~ 620 (694)
T 3dm0_A 558 AGHTGYVSTVAVSPD-GSLCASGGKDGVVLLWDLAEGKKLYSLEAN--SVIHALCFSPNRYWLCAA 620 (694)
T ss_dssp CCCSSCEEEEEECTT-SSEEEEEETTSBCEEEETTTTEEEECCBCS--SCEEEEEECSSSSEEEEE
T ss_pred cCCCCCEEEEEEeCC-CCEEEEEeCCCeEEEEECCCCceEEEecCC--CcEEEEEEcCCCcEEEEE
Confidence 346778999999996 889999999999999999888776544444 556677787776655443
No 107
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=94.37 E-value=0.015 Score=44.68 Aligned_cols=69 Identities=10% Similarity=-0.005 Sum_probs=49.9
Q ss_pred CCCCcccchhhhhCC-------CCCCeEEEEeecceEEEEeCCCCcee-eEEeeccccccccccccCCcc-cccccCCCC
Q psy8836 5 YKLNPGAVEAIAEQP-------GSPNHIIVGYSKGLVVLWDRTTNTAN-QISTMNIVSDRDSFVWKGHAR-LSVKHTGDS 75 (118)
Q Consensus 5 y~~~p~aV~~I~~cP-------~ds~~LlIgg~~G~VVl~d~~~~~~~-~~~~v~l~~~~es~~W~~~~~-~~~~~~~d~ 75 (118)
++.|-+.|..|+++| .|.+.|+-|+..+.|.|||..+...+ ..+... ....++.|+..++ +..+...|+
T Consensus 132 ~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~--~~v~~v~~~p~~~~~l~~~~~d~ 209 (393)
T 4gq1_A 132 KSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLS--SPGISVQFRPSNPNQLIVGERNG 209 (393)
T ss_dssp TTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECS--SCEEEEEEETTEEEEEEEEETTS
T ss_pred cCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCC--CCcEEEEECCCCCceEEecCCCC
Confidence 455778999999987 34678888999999999998665443 333444 6777889987764 455555454
No 108
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=94.13 E-value=0.048 Score=47.42 Aligned_cols=67 Identities=7% Similarity=-0.031 Sum_probs=52.2
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
.|.++|..++++|. .+.|+.|+..|.|.+||..+.+.+..+... ...+.++.|..+++...+.+.|+
T Consensus 613 ~h~~~v~~~~~s~~-~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~~~d~ 679 (1249)
T 3sfz_A 613 PHTDAVYHACFSQD-GQRIASCGADKTLQVFKAETGEKLLDIKAH-EDEVLCCAFSSDDSYIATCSADK 679 (1249)
T ss_dssp CCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSEEEEEETTS
T ss_pred cccccEEEEEECCC-CCEEEEEeCCCeEEEEECCCCCEEEEeccC-CCCEEEEEEecCCCEEEEEeCCC
Confidence 46789999999996 889999999999999999988876554422 13456778888888777766554
No 109
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=94.04 E-value=0.082 Score=45.94 Aligned_cols=61 Identities=15% Similarity=0.165 Sum_probs=46.0
Q ss_pred CCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCccccc
Q psy8836 6 KLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSV 69 (118)
Q Consensus 6 ~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~ 69 (118)
..|.++|..++++|. .+.|+.|+..|.|.+||..+.+......-. ..+.++.|...+.+..
T Consensus 1000 ~~h~~~v~~l~~s~d-g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~--~~v~~~~~~~~~~l~~ 1060 (1249)
T 3sfz_A 1000 VGHKKAVRHIQFTAD-GKTLISSSEDSVIQVWNWQTGDYVFLQAHQ--ETVKDFRLLQDSRLLS 1060 (1249)
T ss_dssp CCCSSCCCCEEECSS-SSCEEEECSSSBEEEEETTTTEEECCBCCS--SCEEEEEECSSSEEEE
T ss_pred ccCCCceEEEEECCC-CCEEEEEcCCCEEEEEECCCCceEEEecCC--CcEEEEEEcCCCcEEE
Confidence 346779999999997 899999999999999999888765332222 4556677777666543
No 110
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=93.82 E-value=0.076 Score=43.25 Aligned_cols=71 Identities=15% Similarity=0.186 Sum_probs=51.3
Q ss_pred CCCCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 5 YKLNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 5 y~~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
++.|.+.|..++++|.....|+.|+..|.|.+||..+.+....+... ...+.++.|..++++..+.+.|+.
T Consensus 143 l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H-~~~V~~v~fspdg~~las~s~D~~ 213 (611)
T 1nr0_A 143 LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEH-TKFVHSVRYNPDGSLFASTGGDGT 213 (611)
T ss_dssp CCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCC-SSCEEEEEECTTSSEEEEEETTSC
T ss_pred ecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccc-cCceEEEEECCCCCEEEEEECCCc
Confidence 34577799999999974457999999999999998776655433321 133567778888888777766653
No 111
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=93.80 E-value=0.1 Score=38.84 Aligned_cols=62 Identities=16% Similarity=0.214 Sum_probs=47.2
Q ss_pred ccchhhhhCCCCCCeEEEEee-cceEEEEeCCCCceeeEEeeccccccccccccCCcccc-cccCCC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYS-KGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLS-VKHTGD 74 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~-~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~-~~~~~d 74 (118)
..|..++++|. .+.|++++. .|.|.+||..+.+.+..+... ....++.|..+++.. ++...|
T Consensus 74 ~~v~~~~~spd-g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~ 137 (391)
T 1l0q_A 74 SSPQGVAVSPD-GKQVYVTNMASSTLSVIDTTSNTVAGTVKTG--KSPLGLALSPDGKKLYVTNNGD 137 (391)
T ss_dssp SSEEEEEECTT-SSEEEEEETTTTEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEETTT
T ss_pred CCccceEECCC-CCEEEEEECCCCEEEEEECCCCeEEEEEeCC--CCcceEEECCCCCEEEEEeCCC
Confidence 47888999996 777877775 499999999999887666655 667788898888754 444433
No 112
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=93.77 E-value=0.065 Score=41.16 Aligned_cols=39 Identities=23% Similarity=0.221 Sum_probs=33.4
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeE
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQI 47 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~ 47 (118)
|...|..|+++|. .+.|++|+..|.|.|||..+.+.+..
T Consensus 146 ~~~~V~sv~fspd-g~~lasgs~Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 146 PGEYISSVAWIKE-GNYLAVGTSSAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp TTCCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CCCcEEEEEECCC-CCEEEEEECCCeEEEEEcCCCcEEEE
Confidence 4458999999996 89999999999999999988766543
No 113
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=93.64 E-value=0.051 Score=42.98 Aligned_cols=67 Identities=7% Similarity=0.041 Sum_probs=43.5
Q ss_pred cccchhhhhCCCCCCeEEE----EeecceEEEEeCCCC--------ceeeEEee--ccccccccccccCC-cccccccCC
Q psy8836 9 PGAVEAIAEQPGSPNHIIV----GYSKGLVVLWDRTTN--------TANQISTM--NIVSDRDSFVWKGH-ARLSVKHTG 73 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlI----gg~~G~VVl~d~~~~--------~~~~~~~v--~l~~~~es~~W~~~-~~~~~~~~~ 73 (118)
++.|..|+++|. .+.|+| |+..|.|.|||..+. +.+..+.. .-...+.++.|+.. +.+..+.+.
T Consensus 92 ~~~v~~l~~spd-g~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 92 KFPIHHLALSCD-NLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp SSCEEEEEECTT-SCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCcccEEEEcCC-CCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 456999999997 788885 455899999986543 22111111 00145678889887 666666666
Q ss_pred CCC
Q psy8836 74 DSK 76 (118)
Q Consensus 74 d~~ 76 (118)
|++
T Consensus 171 Dg~ 173 (434)
T 2oit_A 171 DGS 173 (434)
T ss_dssp TSC
T ss_pred CCe
Confidence 654
No 114
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=93.63 E-value=0.12 Score=39.69 Aligned_cols=66 Identities=8% Similarity=0.030 Sum_probs=48.0
Q ss_pred CCcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 7 LNPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 7 ~~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
.|...|..++++|. .+.|+.|+..|.|.+||..+.+.+..+... ...+.++.|. ++...+.+.|++
T Consensus 308 ~~~~~v~~~~~~~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h-~~~v~~~~~~--~~~l~s~s~dg~ 373 (464)
T 3v7d_B 308 GHTDRIYSTIYDHE-RKRCISASMDTTIRIWDLENGELMYTLQGH-TALVGLLRLS--DKFLVSAAADGS 373 (464)
T ss_dssp CCSSCEEEEEEETT-TTEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEEC--SSEEEEEETTSE
T ss_pred CCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCcEEEEEeCC-CCcEEEEEEc--CCEEEEEeCCCc
Confidence 46678999999996 889999999999999999888876554322 1334556665 455566665643
No 115
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=93.57 E-value=0.078 Score=40.75 Aligned_cols=65 Identities=15% Similarity=0.098 Sum_probs=47.7
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEee----ccccccccccccCCcccccccCCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTM----NIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v----~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
|..+|..++++ .+.|+.|+..|.|.+||..+.+.+..+.. .....+.++.|...+......+.|+
T Consensus 361 ~~~~v~~~~~~---~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 361 HQSAVTCLQFN---KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp CSSCEEEEEEC---SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSS
T ss_pred CCCCEEEEEEC---CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCC
Confidence 55688888885 46899999999999999999988765521 1113456677888887777766564
No 116
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=93.11 E-value=0.072 Score=45.32 Aligned_cols=61 Identities=16% Similarity=0.236 Sum_probs=45.1
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCce-------eeEEeecc---ccccccccccCCcccccccCCC
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTA-------NQISTMNI---VSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~-------~~~~~v~l---~~~~es~~W~~~~~~~~~~~~d 74 (118)
+|..++++|. .+.|++|+..|.|.|||..++.. +..+.... ...+.+++|..++ + +.++.|
T Consensus 131 sv~svafSPD-G~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-L-aass~D 201 (588)
T 2j04_A 131 TYHCFEWNPI-ESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-L-VAALSN 201 (588)
T ss_dssp CEEEEEECSS-SSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-E-EEEETT
T ss_pred cEEEEEEcCC-CCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-E-EEEeCC
Confidence 6999999996 99999999999999999887752 33333221 1356788899888 4 455545
No 117
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=93.07 E-value=0.13 Score=42.09 Aligned_cols=99 Identities=9% Similarity=0.077 Sum_probs=58.2
Q ss_pred CCcccchhhh--hCCCCC-CeEEEEeecceEEEEeCCCCceeeEEeeccc-cccccccccCCcccccccCCCCCCCCCcc
Q psy8836 7 LNPGAVEAIA--EQPGSP-NHIIVGYSKGLVVLWDRTTNTANQISTMNIV-SDRDSFVWKGHARLSVKHTGDSKDKEPSK 82 (118)
Q Consensus 7 ~~p~aV~~I~--~cP~ds-~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~-~~~es~~W~~~~~~~~~~~~d~~~~~p~k 82 (118)
.|-..|..|+ +.| |. ..|+-|+..|.|.|||..+.+....+..... ..+.++.|...++..++.+.|+..+
T Consensus 306 ~H~~~V~sv~~~~s~-~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~---- 380 (524)
T 2j04_B 306 VHDSYILSVSTAYSD-FEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLR---- 380 (524)
T ss_dssp CSSSCEEEEEEECCT-TSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEE----
T ss_pred cccccEEEEEEEcCC-CCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEE----
Confidence 4667899884 444 34 6788888999999999987665433332211 1245778988888877766553211
Q ss_pred ccceeeCCCCCCeeeeeecCChheeeeeeccc
Q psy8836 83 ALLKSVSPGFQPTCLVQLHPPAAVTSLVLHTE 114 (118)
Q Consensus 83 ~~~~~~p~G~Q~~~v~q~~Pp~~ITala~~s~ 114 (118)
-.-.-.|+....+. ---..|++||.+..
T Consensus 381 --lwd~~~~~~~~~l~--gH~~~V~sva~Sp~ 408 (524)
T 2j04_B 381 --AVPSRAAFAVHPLV--SRETTITAIGVSRL 408 (524)
T ss_dssp --EEETTCTTCCEEEE--ECSSCEEEEECCSS
T ss_pred --EEECcccccceeee--cCCCceEEEEeCCC
Confidence 00111233222111 13457888888653
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=92.51 E-value=0.22 Score=37.01 Aligned_cols=63 Identities=17% Similarity=0.096 Sum_probs=47.8
Q ss_pred ccchhhhhCCCCCCeEEEEe---ecceEEEEeCCCCceeeEEeeccccccccccccCCcccc-cccCCCC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGY---SKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLS-VKHTGDS 75 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg---~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~-~~~~~d~ 75 (118)
..+..++++|. .+.|++++ ..|.|.+||..+.+.+..+... ....++.|..+++.. ++...|+
T Consensus 200 ~~~~~~~~~~~-g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~s~~~d~ 266 (391)
T 1l0q_A 200 AAPSGIAVNPE-GTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG--PDPAGIAVTPDGKKVYVALSFXN 266 (391)
T ss_dssp SEEEEEEECTT-SSEEEEEEECSSCCEEEEEETTTTEEEEEEECC--SSEEEEEECTTSSEEEEEETTTT
T ss_pred CCccceEECCC-CCEEEEEecCcCCCcEEEEECCCCeEEEEEecC--CCccEEEEccCCCEEEEEcCCCC
Confidence 46778899996 88888888 5799999999988887666555 556778898888754 5544443
No 119
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=92.41 E-value=0.13 Score=35.89 Aligned_cols=63 Identities=14% Similarity=0.112 Sum_probs=42.9
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCC-CceeeEEeeccccccccccccCCcccccccC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTT-NTANQISTMNIVSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~-~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~ 72 (118)
+.+.|..++++|. .+.|+++ ..|.|.+||..+ .+........-...+.++.|..+++......
T Consensus 40 ~~~~v~~~~~spd-g~~l~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 103 (297)
T 2ojh_A 40 TPELFEAPNWSPD-GKYLLLN-SEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISD 103 (297)
T ss_dssp ESSCCEEEEECTT-SSEEEEE-ETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEE
T ss_pred CCcceEeeEECCC-CCEEEEE-cCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEE
Confidence 4568999999996 6666665 489999999988 6665332211012345678988888665544
No 120
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=92.24 E-value=0.37 Score=34.58 Aligned_cols=60 Identities=12% Similarity=0.155 Sum_probs=40.5
Q ss_pred CcccchhhhhCCCCCCeEEEEeec-ceEEEEeCC--CCceeeEEeeccccccccccccCCcccc
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSK-GLVVLWDRT--TNTANQISTMNIVSDRDSFVWKGHARLS 68 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~-G~VVl~d~~--~~~~~~~~~v~l~~~~es~~W~~~~~~~ 68 (118)
+.+.+..|+++|. .+.|++++.. |.|.+|+.. +.+..............++.|...++..
T Consensus 36 ~~~~~~~~~~spd-g~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 98 (343)
T 1ri6_A 36 VPGQVQPMVVSPD-KRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFV 98 (343)
T ss_dssp CSSCCCCEEECTT-SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEE
T ss_pred cCCCCceEEECCC-CCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEE
Confidence 3457888999996 7888888887 999999876 4443222222211455677888888744
No 121
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=92.13 E-value=0.059 Score=41.36 Aligned_cols=37 Identities=27% Similarity=0.442 Sum_probs=31.5
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCce
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTA 44 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~ 44 (118)
+..+|..++++|.+.++|+.|+..|.|.+||..+.+.
T Consensus 185 ~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~ 221 (393)
T 4gq1_A 185 LSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLS 221 (393)
T ss_dssp CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-
T ss_pred CCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcc
Confidence 4568899999999778999999999999999877654
No 122
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=91.98 E-value=0.52 Score=36.08 Aligned_cols=61 Identities=18% Similarity=0.328 Sum_probs=41.9
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCCC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
..|..++. |.++|+.|+..|.|.+||..+.+....+... ...+.++.| +++...+.+.|+.
T Consensus 134 ~~v~~~~~---d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~l~~--~~~~l~sg~~dg~ 194 (435)
T 1p22_A 134 KGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLECKRILTGH-TGSVLCLQY--DERVIITGSSDST 194 (435)
T ss_dssp CCEEEEEC---CSSEEEEEESSSCEEEEESSSCCEEEEECCC-SSCEEEEEC--CSSEEEEEETTSC
T ss_pred CcEEEEEE---CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCC-CCcEEEEEE--CCCEEEEEcCCCe
Confidence 34555554 4789999999999999999888876554422 134556677 4566666665654
No 123
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=90.92 E-value=0.21 Score=38.30 Aligned_cols=63 Identities=14% Similarity=0.228 Sum_probs=37.4
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeec--cccccccccccCCcccccccCCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMN--IVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~--l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
|...|..++.+ .+.|++|+..|.|.+||..+.+.+..+... -...+.++.|. ++...+.+.|+
T Consensus 318 ~~~~v~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg 382 (445)
T 2ovr_B 318 HQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDG 382 (445)
T ss_dssp CCSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTS
T ss_pred CcccEEEEEEe---CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCC
Confidence 33445555442 557888888888888888777766554421 11334556664 45555555554
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=90.55 E-value=0.43 Score=35.93 Aligned_cols=59 Identities=20% Similarity=0.188 Sum_probs=45.4
Q ss_pred ccchhhhhCCCCCCeEEEEeec---------------ceEEEEeCCCCceeeEEeeccccccccccccCCccccccc
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSK---------------GLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKH 71 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~---------------G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~ 71 (118)
..+..++++|. .+.|+++... |.|.+||..+.+.+..+... ....++.|..+++.....
T Consensus 345 ~~~~~~~~s~d-g~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~ 418 (433)
T 3bws_A 345 DKPNTIALSPD-GKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG--NQPTGLDVSPDNRYLVIS 418 (433)
T ss_dssp SSEEEEEECTT-SSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS--SSEEEEEECTTSCEEEEE
T ss_pred CCCCeEEEcCC-CCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC--CCCceEEEcCCCCEEEEE
Confidence 46778999996 7788888773 69999999998887766654 566788888887765433
No 125
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=90.34 E-value=0.51 Score=34.03 Aligned_cols=58 Identities=9% Similarity=0.010 Sum_probs=42.5
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccC
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~ 72 (118)
.+..+++.|.|.+.|+++ .+.|.+||..+.+.+..+... ....++.|..+++.....+
T Consensus 256 ~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~ 313 (349)
T 1jmx_B 256 LYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD--HTYYCVAFDKKGDKLYLGG 313 (349)
T ss_dssp CEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS--SCCCEEEECSSSSCEEEES
T ss_pred cceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC--CCccceEECCCCCEEEEec
Confidence 455677788447888888 899999999999887766655 5567788887776444333
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=89.57 E-value=0.3 Score=36.78 Aligned_cols=58 Identities=12% Similarity=0.177 Sum_probs=43.8
Q ss_pred cccchhhhhCCCCCCeEEEE-eecceEEEEeCCCCceeeEEeeccccccccccccCCccccc
Q psy8836 9 PGAVEAIAEQPGSPNHIIVG-YSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSV 69 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIg-g~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~ 69 (118)
++.+..++++|. .+.|+++ +..|.|.+||..+.+.+..+... ....++.|..+++...
T Consensus 302 ~~~~~~~~~~~~-g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~ 360 (433)
T 3bws_A 302 PGNKRHIVSGNT-ENKIYVSDMCCSKIEVYDLKEKKVQKSIPVF--DKPNTIALSPDGKYLY 360 (433)
T ss_dssp EECEEEEEECSS-TTEEEEEETTTTEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEE
T ss_pred CCCcceEEECCC-CCEEEEEecCCCEEEEEECCCCcEEEEecCC--CCCCeEEEcCCCCEEE
Confidence 456778999997 6666555 77899999999988887666544 6667888988887443
No 127
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=89.51 E-value=0.88 Score=31.46 Aligned_cols=64 Identities=9% Similarity=-0.026 Sum_probs=43.5
Q ss_pred CcccchhhhhCCCCCCeEEEEeec-----------ceEEEEeCCCCceeeEEee-ccccccccccccCCcccccccC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSK-----------GLVVLWDRTTNTANQISTM-NIVSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~-----------G~VVl~d~~~~~~~~~~~v-~l~~~~es~~W~~~~~~~~~~~ 72 (118)
+...+..++++|. .++|++++.. +.|.+||..+.+....... .-.....++.|..+++......
T Consensus 215 ~~~~~~~~~~s~d-g~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 290 (297)
T 2ojh_A 215 SAYGDWFPHPSPS-GDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVR 290 (297)
T ss_dssp CSEEEEEEEECTT-SSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEE
T ss_pred CCcccCCeEECCC-CCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEE
Confidence 4567888999996 8888888765 6799999988766433322 1113466788888877654443
No 128
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=89.14 E-value=0.86 Score=32.55 Aligned_cols=54 Identities=13% Similarity=0.142 Sum_probs=41.6
Q ss_pred cchhhhhCCCCCCeEEEEe------------ecceEEEEeCCCCceeeEEeeccccccccccccCCccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGY------------SKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARL 67 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg------------~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~ 67 (118)
.+..+++.|. .+.|+++. ..+.|.+||..+.+.+..+... ....++.|..+++.
T Consensus 83 ~~~~~~~s~d-g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~ 148 (337)
T 1pby_B 83 SLFGAALSPD-GKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP--RQITMLAWARDGSK 148 (337)
T ss_dssp CTTCEEECTT-SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC--SSCCCEEECTTSSC
T ss_pred cccceEECCC-CCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC--CCcceeEECCCCCE
Confidence 5778889996 78888886 4699999999888877665554 55677778777763
No 129
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=87.71 E-value=1 Score=32.13 Aligned_cols=55 Identities=9% Similarity=-0.039 Sum_probs=41.4
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVK 70 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~ 70 (118)
.+..|++.|. .+.|+++ .+.|.+||..+.+.+..+... ....++.|..+++....
T Consensus 242 ~~~~~~~s~d-g~~l~~~--~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~ 296 (337)
T 1pby_B 242 FYFSTAVNPA-KTRAFGA--YNVLESFDLEKNASIKRVPLP--HSYYSVNVSTDGSTVWL 296 (337)
T ss_dssp CEEEEEECTT-SSEEEEE--ESEEEEEETTTTEEEEEEECS--SCCCEEEECTTSCEEEE
T ss_pred ceeeEEECCC-CCEEEEe--CCeEEEEECCCCcCcceecCC--CceeeEEECCCCCEEEE
Confidence 3445889995 7888887 799999999998887666655 56677888887774433
No 130
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=87.66 E-value=0.41 Score=36.03 Aligned_cols=34 Identities=9% Similarity=0.055 Sum_probs=30.4
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTN 42 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~ 42 (118)
|.+.|..++++|. .+.|+.|+..|.|.+||..+.
T Consensus 239 h~~~v~~~~~s~~-~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 239 DRADVVDMKWSTD-GSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp CCSCEEEEEECTT-SCEEEEEETTCEEEEEESSCC
T ss_pred CCCcEEEEEECCC-CCEEEEEECCCEEEEEEccCC
Confidence 7789999999996 899999999999999987654
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=87.12 E-value=0.75 Score=35.64 Aligned_cols=59 Identities=8% Similarity=0.097 Sum_probs=43.3
Q ss_pred CcccchhhhhCCCCCCeEEEEeecc---eEEEEeCCCCceeeEEeeccccccccccccCCccccc
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKG---LVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSV 69 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G---~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~ 69 (118)
+.+.|..++++|. .++|+.+...+ .|.+||..+.+........ ....++.|..+++...
T Consensus 177 ~~~~v~~~~~Spd-g~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~--~~~~~~~~spdg~~la 238 (415)
T 2hqs_A 177 SPQPLMSPAWSPD-GSKLAYVTFESGRSALVIQTLANGAVRQVASFP--RHNGAPAFSPDGSKLA 238 (415)
T ss_dssp ESSCEEEEEECTT-SSEEEEEECTTSSCEEEEEETTTCCEEEEECCS--SCEEEEEECTTSSEEE
T ss_pred CCCcceeeEEcCC-CCEEEEEEecCCCcEEEEEECCCCcEEEeecCC--CcccCEEEcCCCCEEE
Confidence 4567889999996 78888887664 9999999888775433222 4456778988887544
No 132
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=86.62 E-value=0.47 Score=40.35 Aligned_cols=63 Identities=13% Similarity=0.071 Sum_probs=46.3
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeec-c---ccccccccccCCcccccccCCCCC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMN-I---VSDRDSFVWKGHARLSVKHTGDSK 76 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~-l---~~~~es~~W~~~~~~~~~~~~d~~ 76 (118)
..|..++|.|. ..+|.+++..|.|.|||..+ .+..+. . . .....+++|..+|+.-...+.|++
T Consensus 86 ~~V~~vawSPd-G~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGt 152 (588)
T 2j04_A 86 CYPRVCKPSPI-DDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGE 152 (588)
T ss_dssp CCEEEEEECSS-SSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSE
T ss_pred CcEEEEEECCC-CCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCE
Confidence 47999999996 88999999999999998543 222222 2 0 013678899999998877776654
No 133
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=86.51 E-value=0.69 Score=33.15 Aligned_cols=55 Identities=15% Similarity=0.061 Sum_probs=37.9
Q ss_pred ccchhhhhCCCCCCeEEEEee-cceEEEEeC---CCCceeeEEeeccccccccccccCCccc
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYS-KGLVVLWDR---TTNTANQISTMNIVSDRDSFVWKGHARL 67 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~-~G~VVl~d~---~~~~~~~~~~v~l~~~~es~~W~~~~~~ 67 (118)
+.+..|+++|. .+.|++++. .|.|.+||. .+.+.+..+... ....++.|...++.
T Consensus 84 ~~~~~~~~s~d-g~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~ 142 (343)
T 1ri6_A 84 GSLTHISTDHQ-GQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL--DGCHSANISPDNRT 142 (343)
T ss_dssp SCCSEEEECTT-SSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC--TTBCCCEECTTSSE
T ss_pred CCCcEEEEcCC-CCEEEEEecCCCeEEEEECCCCccccccccccCC--CCceEEEECCCCCE
Confidence 46788899997 777877765 789999988 333444333333 45667788877763
No 134
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=85.55 E-value=1.3 Score=31.90 Aligned_cols=39 Identities=8% Similarity=0.050 Sum_probs=32.0
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEee
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTM 50 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v 50 (118)
.+..+++.|. .++|++++..|.|.+||..+.+.+..+.+
T Consensus 296 ~~~~~~~s~d-g~~l~~~~~~~~v~v~d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 296 TYYCVAFDKK-GDKLYLGGTFNDLAVFNPDTLEKVKNIKL 334 (349)
T ss_dssp CCCEEEECSS-SSCEEEESBSSEEEEEETTTTEEEEEEEC
T ss_pred CccceEECCC-CCEEEEecCCCeEEEEeccccceeeeeec
Confidence 4667889996 88899999999999999999887765443
No 135
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=85.24 E-value=1 Score=36.77 Aligned_cols=63 Identities=6% Similarity=-0.077 Sum_probs=45.7
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
.|..++++|. ...|+.|+..+.|.|||..+...+..+... ...+.++.|..+++...+.+.|+
T Consensus 357 ~v~~v~fsp~-~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH-~~~V~sva~Sp~g~~l~Sgs~Dg 419 (524)
T 2j04_B 357 NLVPVVYCPQ-IYSYIYSDGASSLRAVPSRAAFAVHPLVSR-ETTITAIGVSRLHPMVLAGSADG 419 (524)
T ss_dssp SCCCEEEETT-TTEEEEECSSSEEEEEETTCTTCCEEEEEC-SSCEEEEECCSSCCBCEEEETTT
T ss_pred cccceEeCCC-cCeEEEeCCCCcEEEEECcccccceeeecC-CCceEEEEeCCCCCeEEEEECCC
Confidence 4778999996 677888888999999998876654333321 14566778888888776666665
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=84.65 E-value=1.8 Score=31.22 Aligned_cols=59 Identities=17% Similarity=0.066 Sum_probs=44.3
Q ss_pred cchhhhhCCCCCCeEEEEee-------cceEEEEeCCCCceeeEEeeccccccccccccCCcc-cccccC
Q psy8836 11 AVEAIAEQPGSPNHIIVGYS-------KGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHAR-LSVKHT 72 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~-------~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~-~~~~~~ 72 (118)
.+..+++.|. .+.|.++.. .|.|.+||..+.+.+..+... ....++.|..+++ +.+...
T Consensus 42 ~~~~~~~s~d-g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~v~~~ 108 (353)
T 3vgz_A 42 GAYEMAYSQQ-ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND--LKPFGATINNTTQTLWFGNT 108 (353)
T ss_dssp SEEEEEEETT-TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES--SCCCSEEEETTTTEEEEEET
T ss_pred CccceEECCC-CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC--CCcceEEECCCCCEEEEEec
Confidence 4567888886 788888874 578999999999888776665 5667778887777 545444
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=84.53 E-value=1.4 Score=31.68 Aligned_cols=55 Identities=7% Similarity=-0.006 Sum_probs=40.8
Q ss_pred hhhCCCCCCeEEEEeecc---eEEEEeCCCCceeeEEeeccccccccccccCCcc-cccccC
Q psy8836 15 IAEQPGSPNHIIVGYSKG---LVVLWDRTTNTANQISTMNIVSDRDSFVWKGHAR-LSVKHT 72 (118)
Q Consensus 15 I~~cP~ds~~LlIgg~~G---~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~-~~~~~~ 72 (118)
++++|. .++|++++..| .|.+||..+.+.+..+... ....++.|..+++ +.+...
T Consensus 89 ~~~s~d-g~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--~~~~~~~~spdg~~l~~~~~ 147 (331)
T 3u4y_A 89 VDITPD-DQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP--YDAVGIAISPNGNGLILIDR 147 (331)
T ss_dssp EEECTT-SSEEEECCCSSSSCEEEEEETTTTEEEEEEECC--TTEEEEEECTTSSCEEEEEE
T ss_pred eEECCC-CCEEEEecCCCCcccEEEEECCCCCeEEEEECC--CCccceEECCCCCEEEEEec
Confidence 889996 77788666663 9999999998887665554 5567788988887 444444
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=82.39 E-value=2.4 Score=30.56 Aligned_cols=55 Identities=4% Similarity=0.044 Sum_probs=40.7
Q ss_pred cchhhhhCCCCCCeEEEEe--ecceEEEEeCCCCceeeEEe-eccccccccccccCCcccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGY--SKGLVVLWDRTTNTANQIST-MNIVSDRDSFVWKGHARLS 68 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg--~~G~VVl~d~~~~~~~~~~~-v~l~~~~es~~W~~~~~~~ 68 (118)
.+..+.++|. .++|.++. ..+.|.+||..+.+.+..+. .. ....++.|..+++..
T Consensus 142 ~~~~~~~s~d-g~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l 199 (353)
T 3vgz_A 142 QPRELVADDA-TNTVYISGIGKESVIWVVDGGNIKLKTAIQNTG--KMSTGLALDSEGKRL 199 (353)
T ss_dssp EEEEEEEETT-TTEEEEEEESSSCEEEEEETTTTEEEEEECCCC--TTCCCCEEETTTTEE
T ss_pred CCceEEECCC-CCEEEEEecCCCceEEEEcCCCCceEEEecCCC--CccceEEECCCCCEE
Confidence 3567889996 78888887 37889999999988876555 23 346677887777644
No 139
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=81.49 E-value=2.5 Score=30.32 Aligned_cols=58 Identities=12% Similarity=0.022 Sum_probs=42.0
Q ss_pred cchhhhhCCCCCCeEEEEee-cceEEEEeCCCCce---eeEEeeccccccccccccCCcc-ccccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGYS-KGLVVLWDRTTNTA---NQISTMNIVSDRDSFVWKGHAR-LSVKH 71 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~-~G~VVl~d~~~~~~---~~~~~v~l~~~~es~~W~~~~~-~~~~~ 71 (118)
....+++.|. .+.|++++. .+.|.+||..+.+. +..+... ....++.|..+++ +.+..
T Consensus 177 ~~~~~~~spd-g~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~--~~~~~~~~spdg~~l~v~~ 239 (331)
T 3u4y_A 177 RPFNITFTPD-GNFAFVANLIGNSIGILETQNPENITLLNAVGTN--NLPGTIVVSRDGSTVYVLT 239 (331)
T ss_dssp SEEEEEECTT-SSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS--SCCCCEEECTTSSEEEEEC
T ss_pred CccceEECCC-CCEEEEEeCCCCeEEEEECCCCcccceeeeccCC--CCCceEEECCCCCEEEEEE
Confidence 4567889996 777877774 78999999988877 5555544 5567788888887 44443
No 140
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=78.41 E-value=3.3 Score=32.97 Aligned_cols=50 Identities=12% Similarity=0.228 Sum_probs=33.9
Q ss_pred EEEe-ecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCCC
Q psy8836 26 IVGY-SKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGDS 75 (118)
Q Consensus 26 lIgg-~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d~ 75 (118)
+++| ..|.|.|||..+.+.++.+.-.--.-..++.|..+++...+...|+
T Consensus 298 lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~ 348 (356)
T 2w18_A 298 AAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDG 348 (356)
T ss_dssp EEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTS
T ss_pred EEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCC
Confidence 4444 5899999999999988665432001123467999998877776564
No 141
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=78.08 E-value=3.1 Score=31.53 Aligned_cols=53 Identities=9% Similarity=0.010 Sum_probs=41.1
Q ss_pred hhhhhCCCCCCeEEEEee-----------cceEEEEeCCCCceeeEEeeccccccccccccCCccccc
Q psy8836 13 EAIAEQPGSPNHIIVGYS-----------KGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSV 69 (118)
Q Consensus 13 ~~I~~cP~ds~~LlIgg~-----------~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~ 69 (118)
+.++.+|. .++|.|+.. ++.|.+||..+.+++..+.+. . ..++.+..+++.-.
T Consensus 257 ~~~a~~~d-g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~--~-p~~ia~spdg~~l~ 320 (361)
T 2oiz_A 257 NLVGLHRA-SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR--D-ALSMTIDQQRNLML 320 (361)
T ss_dssp SCEEEETT-TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT--T-CCEEEEETTTTEEE
T ss_pred eEEEEecC-CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC--C-eeEEEECCCCCEEE
Confidence 34677885 889999876 458999999999999887776 5 77888877776443
No 142
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=77.83 E-value=3.1 Score=36.07 Aligned_cols=60 Identities=17% Similarity=0.145 Sum_probs=44.4
Q ss_pred CcccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCccccc
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSV 69 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~ 69 (118)
+...+..+++.|. .++|+.+...+.|.+||..+.+....+... .....++.|..+++...
T Consensus 377 ~~~~~~~~~~SpD-G~~la~~~~~~~v~~~d~~tg~~~~~~~~~-~~~v~~~~~SpDG~~la 436 (1045)
T 1k32_A 377 NLGNVFAMGVDRN-GKFAVVANDRFEIMTVDLETGKPTVIERSR-EAMITDFTISDNSRFIA 436 (1045)
T ss_dssp CCCSEEEEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECS-SSCCCCEEECTTSCEEE
T ss_pred CccceeeeEECCC-CCEEEEECCCCeEEEEECCCCceEEeccCC-CCCccceEECCCCCeEE
Confidence 3457888999996 899999999999999999988876544222 13346777877777553
No 143
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=77.26 E-value=2.5 Score=32.57 Aligned_cols=60 Identities=15% Similarity=0.105 Sum_probs=40.1
Q ss_pred CcccchhhhhCCCCCCeEEEEee-c--ceEEEEeCCCCceeeEEeeccccccccccccCCcccccc
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYS-K--GLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVK 70 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~-~--G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~ 70 (118)
+++.+..++++|. .++|++.+. . ..|.+||..+.+......-. ....++.|..+++....
T Consensus 221 ~~~~~~~~~~spd-g~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~--~~~~~~~~spdg~~l~~ 283 (415)
T 2hqs_A 221 FPRHNGAPAFSPD-GSKLAFALSKTGSLNLYVMDLASGQIRQVTDGR--SNNTEPTWFPDSQNLAF 283 (415)
T ss_dssp CSSCEEEEEECTT-SSEEEEEECTTSSCEEEEEETTTCCEEECCCCS--SCEEEEEECTTSSEEEE
T ss_pred CCCcccCEEEcCC-CCEEEEEEecCCCceEEEEECCCCCEEeCcCCC--CcccceEECCCCCEEEE
Confidence 4567889999996 777775543 3 45888999887764322222 34557789888875543
No 144
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=75.85 E-value=5.3 Score=32.88 Aligned_cols=59 Identities=8% Similarity=0.026 Sum_probs=42.9
Q ss_pred cchhhhhCCCCCCeEEEEeecc-----eEEEEeCCCCceeeEEeeccccccccccccCCcccccccC
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKG-----LVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G-----~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~ 72 (118)
.+..+++.|. .++|+.+...+ +|.+||..+++.......+ ....++.|..+++......
T Consensus 126 ~~~~~~~SPD-g~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~--~~~~~~~wspDg~~l~~~~ 189 (710)
T 2xdw_A 126 ALRGYAFSED-GEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER--VKFSCMAWTHDGKGMFYNA 189 (710)
T ss_dssp EEEEEEECTT-SSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE--ECSCCEEECTTSSEEEEEE
T ss_pred EEEEEEECCC-CCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC--cccceEEEEeCCCEEEEEE
Confidence 5778899996 88888777654 8999999999887543333 2356789998887664433
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=74.55 E-value=4 Score=33.04 Aligned_cols=54 Identities=9% Similarity=0.028 Sum_probs=39.3
Q ss_pred ccchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccc
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLS 68 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~ 68 (118)
..|..+++.|. ++|+++ ..|.|.+||..+.+........ ....++.|..+++..
T Consensus 82 ~~v~~~~~spd--~~~~~~-~~~~i~~~d~~~~~~~~l~~~~--~~~~~~~~SpdG~~l 135 (706)
T 2z3z_A 82 FPSFRTLDAGR--GLVVLF-TQGGLVGFDMLARKVTYLFDTN--EETASLDFSPVGDRV 135 (706)
T ss_dssp CCCEEEEETTT--TEEEEE-ETTEEEEEETTTTEEEEEECCT--TCCTTCEECTTSSEE
T ss_pred cCceeEEECCC--CeEEEE-ECCEEEEEECCCCceEEccCCc--ccccCCcCCCCCCEE
Confidence 46888999995 777777 4599999999888776544333 446677787777654
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=74.35 E-value=4.6 Score=34.94 Aligned_cols=60 Identities=10% Similarity=0.108 Sum_probs=40.7
Q ss_pred CcccchhhhhCCCCCCeEEEEeecc----------eEEEEeCCCCceeeEEeeccccccccccccCCcccccc
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKG----------LVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVK 70 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G----------~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~ 70 (118)
+.+.|..+++.|. .+.|+.++..+ .|.+||..+.+........ ....++.|..+++....
T Consensus 419 ~~~~v~~~~~SpD-G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~--~~~~~~~~spdG~~l~~ 488 (1045)
T 1k32_A 419 REAMITDFTISDN-SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTEN--SHDYAPAFDADSKNLYY 488 (1045)
T ss_dssp SSSCCCCEEECTT-SCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSS--SBEEEEEECTTSCEEEE
T ss_pred CCCCccceEECCC-CCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCC--cccCCceEcCCCCEEEE
Confidence 5567889999996 88888887754 9999999887643221111 22345678888875443
No 147
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=71.98 E-value=4.6 Score=30.27 Aligned_cols=62 Identities=10% Similarity=0.193 Sum_probs=46.4
Q ss_pred cchhhhhCCCCCCeEE-EEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccCCC
Q psy8836 11 AVEAIAEQPGSPNHII-VGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 11 aV~~I~~cP~ds~~Ll-Igg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d 74 (118)
.+..|+++|. .++|. |.-..+.|+..|.. .+++..+...=..|.|++++.+.+.+.+++..+
T Consensus 28 ~lSGla~~~~-~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~ 90 (255)
T 3qqz_A 28 NISSLTWSAQ-SNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERD 90 (255)
T ss_dssp CEEEEEEETT-TTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTT
T ss_pred CcceeEEeCC-CCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCC
Confidence 5778999998 56565 57777899999988 777776654423688999999989887765433
No 148
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=71.44 E-value=6.6 Score=31.89 Aligned_cols=40 Identities=5% Similarity=-0.011 Sum_probs=32.2
Q ss_pred cccchhhhhCCCCCCeEEEEee-cc-----eEEEEeCCCCceeeEEe
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGYS-KG-----LVVLWDRTTNTANQIST 49 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg~-~G-----~VVl~d~~~~~~~~~~~ 49 (118)
++.|..+++.|. .++|+.++. .| .|.+||..+.+....+.
T Consensus 36 ~~~~~~~~~Spd-G~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~ 81 (741)
T 2ecf_A 36 GPTLMKPKVAPD-GSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVD 81 (741)
T ss_dssp CCCCEEEEECTT-SSEEEEEECCSSCTTEEEEEEEETTTCCEEEEEC
T ss_pred CCCCCCceEecC-CCEEEEEeccCCCCcccEEEEEECCCCceeEccc
Confidence 557889999996 888888887 67 89999998887765543
No 149
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=70.92 E-value=5 Score=32.55 Aligned_cols=55 Identities=13% Similarity=0.008 Sum_probs=41.2
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeC--CCCceeeEEeeccccccccccccC----Ccccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDR--TTNTANQISTMNIVSDRDSFVWKG----HARLS 68 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~--~~~~~~~~~~v~l~~~~es~~W~~----~~~~~ 68 (118)
++..+...|. .+.|.+++..|.|.+||. .+.+.+..+... ....++.+.. +++..
T Consensus 180 ~~~~v~~spd-g~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g--~~p~~va~sp~~~~dg~~l 240 (543)
T 1nir_A 180 AVHISRMSAS-GRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG--IEARSVESSKFKGYEDRYT 240 (543)
T ss_dssp TEEEEEECTT-SCEEEEEETTSEEEEEETTSSSCEEEEEEECC--SEEEEEEECCSTTCTTTEE
T ss_pred ccceEEECCC-CCEEEEECCCCeEEEEECcCCCCcEEEEEecC--CCcceEEeCCCcCCCCCEE
Confidence 3667889996 999999999999999999 777776655543 4456666665 66654
No 150
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=69.60 E-value=3.3 Score=33.67 Aligned_cols=54 Identities=9% Similarity=0.139 Sum_probs=37.4
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCC---ceeeEEeeccccccccccccCCcccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTN---TANQISTMNIVSDRDSFVWKGHARLS 68 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~---~~~~~~~v~l~~~~es~~W~~~~~~~ 68 (118)
.|..+++.|. .++|+.+.. +.|.+||..+. +........ ....++.|..+++..
T Consensus 110 ~v~~~~~SpD-g~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~--~~~~~~~~SPDG~~l 166 (741)
T 2ecf_A 110 GIVDYQWSPD-AQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGE--GFATDAKLSPKGGFV 166 (741)
T ss_dssp ESCCCEECTT-SSEEEEEET-TEEEEEESSSCSTTSCCBCCCSS--SCEEEEEECTTSSEE
T ss_pred CcceeEECCC-CCEEEEEeC-CcEEEEECCCCCcceEEEcccCC--cccccccCCCCCCEE
Confidence 4889999996 777777776 99999998877 554322222 334566777777644
No 151
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=69.37 E-value=7.4 Score=29.94 Aligned_cols=55 Identities=15% Similarity=0.100 Sum_probs=43.1
Q ss_pred cccchhhhhCCCCCCeEEEEee----------cceEEEEeCCCCceeeEEeeccccccccccccCCcc
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGYS----------KGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHAR 66 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg~----------~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~ 66 (118)
|+..+.+...|. .++|.|+.. ++.|.++|..+.+++..+.+. ..-.++.|..+++
T Consensus 266 p~g~~~~~~s~d-~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g--~~p~~i~~s~Dg~ 330 (373)
T 2mad_H 266 PGGWQQVAYLKS-SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG--HDVDAISVAQDGG 330 (373)
T ss_pred cCceEeEEECCC-CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC--CCcCeEEECCCCC
Confidence 444555777885 889999764 468999999999998877766 6678888988887
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=69.21 E-value=3.8 Score=33.15 Aligned_cols=60 Identities=10% Similarity=0.025 Sum_probs=39.3
Q ss_pred cccchhhhhCCCCCCeEEEEe---------------------------------ecceEEEEeCCCCceeeEEeec-ccc
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGY---------------------------------SKGLVVLWDRTTNTANQISTMN-IVS 54 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg---------------------------------~~G~VVl~d~~~~~~~~~~~v~-l~~ 54 (118)
...+..++|.|. .++|+.+. ..+.|.+||..+.+........ --.
T Consensus 180 ~~~~~~~~~SpD-g~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 258 (706)
T 2z3z_A 180 FGIEKGTFWSPK-GSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEK 258 (706)
T ss_dssp TTCCCSEEECTT-SSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTC
T ss_pred cCCCceEEECCC-CCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCce
Confidence 344789999996 88888876 4578999999887764332110 001
Q ss_pred ccccccccCCccccc
Q psy8836 55 DRDSFVWKGHARLSV 69 (118)
Q Consensus 55 ~~es~~W~~~~~~~~ 69 (118)
.+.++.|..+++...
T Consensus 259 ~~~~~~~spdg~~l~ 273 (706)
T 2z3z_A 259 FLTNLSWSPDENILY 273 (706)
T ss_dssp EEEEEEECTTSSEEE
T ss_pred eEeeEEEECCCCEEE
Confidence 234677888877443
No 153
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=66.04 E-value=9.3 Score=30.37 Aligned_cols=61 Identities=21% Similarity=0.207 Sum_probs=46.5
Q ss_pred cccchhhhhCCCCCCeEEEEee----------cceEEEEeCCCCceeeEEeeccccccccccccCCcc--cccccC
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGYS----------KGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHAR--LSVKHT 72 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg~----------~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~--~~~~~~ 72 (118)
|+..+.++.+|. .++|.|+.. +..|.++|.++.+++.++.+. ....++.-..+++ +.+.+.
T Consensus 279 p~g~q~~a~~~~-~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg--~~~~~lavs~D~~~~ly~tn~ 351 (386)
T 3sjl_D 279 PGGWQQVAYHRA-LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG--HEIDSINVSQDEKPLLYALST 351 (386)
T ss_dssp ECSSSCEEEETT-TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE--EEECEEEECSSSSCEEEEEET
T ss_pred CCCcceeeECCC-CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC--CCcceEEECCCCCeEEEEEcC
Confidence 566677888886 999999864 468999999999999888877 6666776666665 555444
No 154
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=65.69 E-value=3.9 Score=32.47 Aligned_cols=64 Identities=16% Similarity=0.104 Sum_probs=43.4
Q ss_pred CcccchhhhhCCCCCCeEEEEeecc--eEEEEeCCCCceeeEEeecccccccccc--------ccCCcccccccCCC
Q psy8836 8 NPGAVEAIAEQPGSPNHIIVGYSKG--LVVLWDRTTNTANQISTMNIVSDRDSFV--------WKGHARLSVKHTGD 74 (118)
Q Consensus 8 ~p~aV~~I~~cP~ds~~LlIgg~~G--~VVl~d~~~~~~~~~~~v~l~~~~es~~--------W~~~~~~~~~~~~d 74 (118)
+.+.+..+++.|. .++|..+...| +|.+||..+.+.. .+. .......++. |..++++..+...|
T Consensus 193 ~~~~~~~~~~SpD-G~~l~~~~~~~~~~i~~~d~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 266 (582)
T 3o4h_A 193 GEGSFSSASISPG-MKVTAGLETAREARLVTVDPRDGSVE-DLE-LPSKDFSSYRPTAITWLGYLPDGRLAVVARRE 266 (582)
T ss_dssp SSCEEEEEEECTT-SCEEEEEECSSCEEEEEECTTTCCEE-ECC-CSCSHHHHHCCSEEEEEEECTTSCEEEEEEET
T ss_pred CCCccccceECCC-CCEEEEccCCCeeEEEEEcCCCCcEE-Ecc-CCCcChhhhhhccccceeEcCCCcEEEEEEcC
Confidence 5677889999996 77787666678 8999999887765 222 2113345666 88888665555434
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=64.38 E-value=5.5 Score=32.35 Aligned_cols=54 Identities=6% Similarity=0.095 Sum_probs=38.8
Q ss_pred chhhhhCCCCCCeEEEEee---------cceEEEEeCCCCceeeEEeeccccccccccccCCcccc
Q psy8836 12 VEAIAEQPGSPNHIIVGYS---------KGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLS 68 (118)
Q Consensus 12 V~~I~~cP~ds~~LlIgg~---------~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~ 68 (118)
|..+++.|. .++|+.++. .+.|.+||..+.+.+....+. ....++.|..+|+..
T Consensus 62 ~~~~~~SpD-g~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~--~~~~~~~~SPDG~~l 124 (719)
T 1z68_A 62 ASNYGLSPD-RQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP--RPIQYLCWSPVGSKL 124 (719)
T ss_dssp CSEEEECTT-SSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC--SSBCCEEECSSTTCE
T ss_pred eeeEEECCC-CCeEEEEecCceeEEeecceEEEEEECCCCccccceecC--cccccceECCCCCEE
Confidence 788999996 888888877 589999999888762111112 445667787777654
No 156
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=62.90 E-value=13 Score=26.71 Aligned_cols=55 Identities=15% Similarity=0.140 Sum_probs=38.5
Q ss_pred cchhhhhCCCCCCeEEEEeec---c--eEEEEeCCCCceeeEEeeccccccccccccCCccccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSK---G--LVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSV 69 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~---G--~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~ 69 (118)
.+..+++.|. .++|+.+... | +|.+||..+.+..+..... . ..++.|..+++...
T Consensus 60 ~~~~~~~SpD-g~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~--~-~~~~~wspdg~~l~ 119 (347)
T 2gop_A 60 NATMPRISPD-GKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK--N-IRSLEWNEDSRKLL 119 (347)
T ss_dssp SCEEEEECTT-SSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES--E-EEEEEECTTSSEEE
T ss_pred cCCCeEECCC-CCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC--C-ccceeECCCCCEEE
Confidence 4566889996 7788777654 3 4677788888776555554 4 67788987877544
No 157
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=58.55 E-value=14 Score=26.50 Aligned_cols=59 Identities=10% Similarity=0.072 Sum_probs=37.6
Q ss_pred cchhhhhCCCCCCeEEE-EeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccC
Q psy8836 11 AVEAIAEQPGSPNHIIV-GYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlI-gg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~ 72 (118)
.++.+++.|+ ++|++ +...|.|.+||..+.+...... .......++.|..++++.+...
T Consensus 46 ~~~~~~~~~~--g~l~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~i~~~~dg~l~v~~~ 105 (333)
T 2dg1_A 46 QLEGLNFDRQ--GQLFLLDVFEGNIFKINPETKEIKRPFV-SHKANPAAIKIHKDGRLFVCYL 105 (333)
T ss_dssp CEEEEEECTT--SCEEEEETTTCEEEEECTTTCCEEEEEE-CSSSSEEEEEECTTSCEEEEEC
T ss_pred cccCcEECCC--CCEEEEECCCCEEEEEeCCCCcEEEEee-CCCCCcceEEECCCCcEEEEeC
Confidence 4577788875 44665 5567899999998877654331 1113455667777777666544
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=58.49 E-value=13 Score=27.12 Aligned_cols=57 Identities=7% Similarity=0.049 Sum_probs=36.6
Q ss_pred cchhhhhCCCCCCeEEEEe-ecceEEEEeCCCCceeeEEeecccc----ccccccccCCcccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGY-SKGLVVLWDRTTNTANQISTMNIVS----DRDSFVWKGHARLS 68 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg-~~G~VVl~d~~~~~~~~~~~v~l~~----~~es~~W~~~~~~~ 68 (118)
...+++++|. .+.|.++. ..+.|.+||..+.+......+.... ...++.|..+++..
T Consensus 212 ~~~~~~~spd-g~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l 273 (361)
T 3scy_A 212 GPRHLIFNSD-GKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYL 273 (361)
T ss_dssp CEEEEEECTT-SSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEE
T ss_pred CCeEEEEcCC-CCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEE
Confidence 4567899996 77788887 5799999988766543222222111 11266788888754
No 159
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=58.44 E-value=12 Score=27.48 Aligned_cols=62 Identities=16% Similarity=0.176 Sum_probs=39.5
Q ss_pred cccchhhhhCCCCCCeEEEEeecc-------------------------eEEEEeCCCCceeeEEeeccccccccccccC
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGYSKG-------------------------LVVLWDRTTNTANQISTMNIVSDRDSFVWKG 63 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg~~G-------------------------~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~ 63 (118)
.+.|..|+..|+ ++|+|+...+ .|.+||..+.+++..+.........++....
T Consensus 23 l~~v~~va~d~~--G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 23 PGQVSGVALDSK--NNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT 100 (329)
T ss_dssp CSCEEEEEECTT--CCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT
T ss_pred cCCceEEEECCC--CCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC
Confidence 457888999986 6777877665 6999999888776443322112233455555
Q ss_pred CcccccccC
Q psy8836 64 HARLSVKHT 72 (118)
Q Consensus 64 ~~~~~~~~~ 72 (118)
.+++.++..
T Consensus 101 ~g~l~v~d~ 109 (329)
T 3fvz_A 101 DGNYWVTDV 109 (329)
T ss_dssp TSCEEEEET
T ss_pred CCCEEEEEC
Confidence 666655544
No 160
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=58.36 E-value=14 Score=26.65 Aligned_cols=62 Identities=13% Similarity=0.048 Sum_probs=37.4
Q ss_pred ccchhhhhCCCCCCeEEEEe-ecceEEEEeCCCC-ceeeEEeeccc----------cccccccccCCcccccccC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGY-SKGLVVLWDRTTN-TANQISTMNIV----------SDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg-~~G~VVl~d~~~~-~~~~~~~v~l~----------~~~es~~W~~~~~~~~~~~ 72 (118)
..+..|++.|. .+.|+++. ..|.|.+||.... .......+... ....++.|..++++.++..
T Consensus 86 ~~p~~~a~spd-g~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~ 159 (347)
T 3hfq_A 86 TPPAYVAVDEA-RQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDL 159 (347)
T ss_dssp CCCSEEEEETT-TTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEET
T ss_pred CCCEEEEECCC-CCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeC
Confidence 36677888996 77888887 6799999987533 22211111100 0123467777777665544
No 161
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=55.67 E-value=12 Score=30.14 Aligned_cols=53 Identities=8% Similarity=-0.063 Sum_probs=35.8
Q ss_pred hCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccC
Q psy8836 17 EQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 17 ~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~ 72 (118)
.+|. ...++.++.+|.|.+||..+.+.+..+... ....++.+..+++.....+
T Consensus 145 ~~p~-~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g--~~~~~v~~spdg~~l~v~~ 197 (543)
T 1nir_A 145 LDLP-NLFSVTLRDAGQIALVDGDSKKIVKVIDTG--YAVHISRMSASGRYLLVIG 197 (543)
T ss_dssp CCGG-GEEEEEEGGGTEEEEEETTTCCEEEEEECS--TTEEEEEECTTSCEEEEEE
T ss_pred cCCC-CEEEEEEcCCCeEEEEECCCceEEEEEecC--cccceEEECCCCCEEEEEC
Confidence 5675 455555666789999999999988777654 4455666666666544333
No 162
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=55.53 E-value=12 Score=29.25 Aligned_cols=60 Identities=7% Similarity=0.030 Sum_probs=44.3
Q ss_pred ccchhhhhCCCCCCeEEEEee---------cceEEEEeCCCCceeeEEeeccccccccccccCCcc-cccccC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYS---------KGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHAR-LSVKHT 72 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~---------~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~-~~~~~~ 72 (118)
+..+.+...|. .++|.|+.. ++.+.++|..+.+++.++.+. ..-+++.+..+++ +++.+.
T Consensus 264 ~g~~~v~~s~d-g~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg--~~p~gi~~s~Dg~~l~va~~ 333 (368)
T 1mda_H 264 AGFQMVAKLKN-TDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG--HDSDAIIAAQDGASDNYANS 333 (368)
T ss_dssp CSSSCEEEETT-TTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE--EEECEEEECCSSSCEEEEEE
T ss_pred CcceeeEEcCC-CCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC--CCcceEEECCCCCEEEEEcc
Confidence 33444677775 888999754 346779999999999877776 6678888888876 555554
No 163
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=54.48 E-value=12 Score=29.68 Aligned_cols=42 Identities=10% Similarity=0.105 Sum_probs=27.4
Q ss_pred CcccchhhhhCC-CCCCeEEE-EeecceEEEEeCCCCceeeEEe
Q psy8836 8 NPGAVEAIAEQP-GSPNHIIV-GYSKGLVVLWDRTTNTANQIST 49 (118)
Q Consensus 8 ~p~aV~~I~~cP-~ds~~LlI-gg~~G~VVl~d~~~~~~~~~~~ 49 (118)
++..|..+++.| ++.+.+++ |+..+.|.|||.++.+.+..+.
T Consensus 177 ~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~ 220 (356)
T 2w18_A 177 MPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMH 220 (356)
T ss_dssp CCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEc
Confidence 344455555555 22334444 5778999999999998876654
No 164
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=50.85 E-value=18 Score=29.09 Aligned_cols=56 Identities=13% Similarity=0.083 Sum_probs=37.2
Q ss_pred cchhhhhCCCCCCeEEEEeec---------ceEEEEeCCCCceeeEEeeccc--cccccccccCCcccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSK---------GLVVLWDRTTNTANQISTMNIV--SDRDSFVWKGHARLS 68 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~---------G~VVl~d~~~~~~~~~~~v~l~--~~~es~~W~~~~~~~ 68 (118)
.|..+++.|. .++|+.+... +.+.+||..+.+.. .+...-- ....++.|..+|+..
T Consensus 62 ~v~~~~~SpD-g~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~SPdG~~l 128 (723)
T 1xfd_A 62 RAIRYEISPD-REYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ-SLDPPEVSNAKLQYAGWGPKGQQL 128 (723)
T ss_dssp TCSEEEECTT-SSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE-ECCCTTCCSCCCSBCCBCSSTTCE
T ss_pred ccceEEECCC-CCEEEEEecCccceeecceeeEEEEECCCCceE-eccCCccccccccccEECCCCCEE
Confidence 4888999996 8888888663 88999999887752 2221100 114567787777654
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=50.83 E-value=27 Score=25.37 Aligned_cols=52 Identities=15% Similarity=0.077 Sum_probs=35.0
Q ss_pred hhhCCCCCCeEEEEee-cc--eEEEEeCCCCceeeEEeecccccc-ccccccCCccccc
Q psy8836 15 IAEQPGSPNHIIVGYS-KG--LVVLWDRTTNTANQISTMNIVSDR-DSFVWKGHARLSV 69 (118)
Q Consensus 15 I~~cP~ds~~LlIgg~-~G--~VVl~d~~~~~~~~~~~v~l~~~~-es~~W~~~~~~~~ 69 (118)
.++.|. .++|+.+.. .| +|-+||..+.+..+.+... ... -++.|..+++...
T Consensus 41 ~~~SpD-g~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~--~~~~~~~~~spdg~~l~ 96 (388)
T 3pe7_A 41 KCFTRD-GSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGR--GDNTFGGFLSPDDDALF 96 (388)
T ss_dssp CCBCTT-SCEEEEEECTTSSCEEEEEETTTCEEEECCCSS--CBCSSSCEECTTSSEEE
T ss_pred ccCCCC-CCEEEEEEcCCCCceEEEEeCCCCceEEeeeCC--CCCccceEEcCCCCEEE
Confidence 678996 888888887 56 5888899888876543322 221 2456877776543
No 166
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=50.69 E-value=16 Score=29.24 Aligned_cols=59 Identities=17% Similarity=0.132 Sum_probs=44.1
Q ss_pred ccchhhhhCCCCCCeEEEEee----------cceEEEEeCCCCceeeEEeeccccccccccccCCcc--ccccc
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYS----------KGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHAR--LSVKH 71 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~----------~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~--~~~~~ 71 (118)
+..+.|..+|. .++|.|+-. ++.|.+.|..+.+++..+.+. ..-.++.+..+++ +.+..
T Consensus 319 ~g~~~va~s~d-g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg--~~P~gia~spDg~~~lyv~n 389 (426)
T 3c75_H 319 GGWQQTAYHRQ-SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG--HEIDSINVSQDAEPLLYALS 389 (426)
T ss_dssp CSSSCEEEEGG-GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE--EEECEEEECCSSSCEEEEEE
T ss_pred CCceeeEEcCC-CCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC--CCcCeEEEccCCCEEEEEEc
Confidence 33444677886 889999853 568999999999999888776 6677788877776 44444
No 167
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=49.28 E-value=25 Score=25.30 Aligned_cols=56 Identities=13% Similarity=0.048 Sum_probs=35.3
Q ss_pred cchhhhhCCCCCCeEEEEee-cceEEEEeCCCC---ceeeEEeeccccccccccccCCcccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGYS-KGLVVLWDRTTN---TANQISTMNIVSDRDSFVWKGHARLS 68 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~-~G~VVl~d~~~~---~~~~~~~v~l~~~~es~~W~~~~~~~ 68 (118)
.+..|++.|. .+.|.++.. .+.|.+||.... +.+..+... -....++.|..+++..
T Consensus 241 ~~~~i~~spd-G~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~-~~~~~~~~~spdg~~l 300 (347)
T 3hfq_A 241 GAAAIRLSHD-GHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTE-GDFPRDFDLDPTEAFV 300 (347)
T ss_dssp EEEEEEECTT-SCEEEEEEETTTEEEEEEECGGGCEEEEEEEECS-SSCCCEEEECTTSSEE
T ss_pred cceeEEECCC-CCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecC-CCCcCeEEECCCCCEE
Confidence 4667889996 777877765 689999987633 222222221 0234567788888744
No 168
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=49.21 E-value=21 Score=28.66 Aligned_cols=58 Identities=7% Similarity=0.074 Sum_probs=38.8
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccc------------------cccccccCCccccccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSD------------------RDSFVWKGHARLSVKH 71 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~------------------~es~~W~~~~~~~~~~ 71 (118)
.|..+++.|. .++|+.+.. +.|.+||..+.+..+.+...- .. ..++.|..+++.....
T Consensus 115 ~~~~~~~SPd-G~~la~~~~-~~i~~~~~~~g~~~~~~~~~~-~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~ 190 (723)
T 1xfd_A 115 KLQYAGWGPK-GQQLIFIFE-NNIYYCAHVGKQAIRVVSTGK-EGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYA 190 (723)
T ss_dssp CCSBCCBCSS-TTCEEEEET-TEEEEESSSSSCCEEEECCCB-TTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEE
T ss_pred cccccEECCC-CCEEEEEEC-CeEEEEECCCCceEEEecCCC-CCceECcccceeEEEEeccCcceEEECCCCCEEEEE
Confidence 3788999996 666666554 899999998877765433210 11 1468898888865443
No 169
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=47.90 E-value=28 Score=24.88 Aligned_cols=54 Identities=9% Similarity=0.142 Sum_probs=37.2
Q ss_pred chhhhhCCCCCCeEEEEee---------------------------cceEEEEeCCCCceeeEEeeccccccccccccCC
Q psy8836 12 VEAIAEQPGSPNHIIVGYS---------------------------KGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGH 64 (118)
Q Consensus 12 V~~I~~cP~ds~~LlIgg~---------------------------~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~ 64 (118)
+..++|.|. .++|+.+.. ..+|.+||..+.+.+..+..+ ...++.|..+
T Consensus 106 ~~~~~wspd-g~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~---~~~~~~~spd 181 (347)
T 2gop_A 106 IRSLEWNED-SRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP---RFSSGIWHRD 181 (347)
T ss_dssp EEEEEECTT-SSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEE---TTCEEEEETT
T ss_pred ccceeECCC-CCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCC---CcccccCCCC
Confidence 778899996 788887763 368888999888763333322 4567778777
Q ss_pred cccccc
Q psy8836 65 ARLSVK 70 (118)
Q Consensus 65 ~~~~~~ 70 (118)
+ +...
T Consensus 182 g-~~~~ 186 (347)
T 2gop_A 182 K-IVVN 186 (347)
T ss_dssp E-EEEE
T ss_pred e-EEEE
Confidence 7 4433
No 170
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=46.99 E-value=24 Score=27.46 Aligned_cols=40 Identities=10% Similarity=0.137 Sum_probs=31.6
Q ss_pred cchhhhhCCCCCCeEEEEee--cceEEEEeCCCCceeeEEeec
Q psy8836 11 AVEAIAEQPGSPNHIIVGYS--KGLVVLWDRTTNTANQISTMN 51 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~--~G~VVl~d~~~~~~~~~~~v~ 51 (118)
....|++.|. .++|+++.. ++.|.++|..+.+++..+.+.
T Consensus 315 ~p~gi~~s~D-g~~l~va~~~~~~~VsVID~~t~kvv~~I~vg 356 (368)
T 1mda_H 315 DSDAIIAAQD-GASDNYANSAGTEVLDIYDAASDQDQSSVELD 356 (368)
T ss_dssp EECEEEECCS-SSCEEEEEETTTTEEEEEESSSCEEEEECCCC
T ss_pred CcceEEECCC-CCEEEEEccCCCCeEEEEECCCCcEEEEEECC
Confidence 4667888886 666777765 899999999999998766544
No 171
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=45.73 E-value=17 Score=27.42 Aligned_cols=34 Identities=12% Similarity=0.085 Sum_probs=27.7
Q ss_pred chhhhhCCCCCCeEEEEeecceEEEEeCCCC--ceeeE
Q psy8836 12 VEAIAEQPGSPNHIIVGYSKGLVVLWDRTTN--TANQI 47 (118)
Q Consensus 12 V~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~--~~~~~ 47 (118)
+..|++.|. -++|.++.. +.|.+||..+. +.+..
T Consensus 307 p~~ia~spd-g~~l~v~n~-~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 307 ALSMTIDQQ-RNLMLTLDG-GNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp CCEEEEETT-TTEEEEECS-SCEEEEECSSSSCEEEEE
T ss_pred eeEEEECCC-CCEEEEeCC-CeEEEEECCCCcceeeEE
Confidence 667888886 778888776 99999999998 77754
No 172
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=44.44 E-value=28 Score=28.63 Aligned_cols=49 Identities=18% Similarity=0.019 Sum_probs=36.2
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCC--CCceeeEEeecccccccccccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRT--TNTANQISTMNIVSDRDSFVWK 62 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~--~~~~~~~~~v~l~~~~es~~W~ 62 (118)
++..+...|. .+.|.|++..|.|.+||.. +.+++..+.+. ..-.++.+.
T Consensus 198 ~p~~v~~SpD-Gr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G--~~P~~ia~s 248 (567)
T 1qks_A 198 AVHISRLSAS-GRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG--SEARSIETS 248 (567)
T ss_dssp CEEEEEECTT-SCEEEEEETTSEEEEEETTSSSCCEEEEEECC--SEEEEEEEC
T ss_pred CccceEECCC-CCEEEEEcCCCeEEEEECCCCCCcEeEEEecC--CCCceeEEc
Confidence 4557888995 8999999999999999995 66666554443 444556665
No 173
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=44.33 E-value=27 Score=25.67 Aligned_cols=39 Identities=10% Similarity=0.146 Sum_probs=29.8
Q ss_pred cchhhhhCCCCCCeEEEEe-----ecceEEEEeCCCCceeeEEeec
Q psy8836 11 AVEAIAEQPGSPNHIIVGY-----SKGLVVLWDRTTNTANQISTMN 51 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg-----~~G~VVl~d~~~~~~~~~~~v~ 51 (118)
....|+..|. .+.|.|+. .+|.|.+||.. .+.+..+.+.
T Consensus 268 ~p~gi~vdp~-~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G 311 (328)
T 3dsm_A 268 KYYGLTVNPN-NGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVG 311 (328)
T ss_dssp CEEEEEECTT-TCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEE
T ss_pred ceEEEEEcCC-CCeEEEEcccccccCCEEEEECCC-CCEEEEEEec
Confidence 4556788886 78888886 67999999988 6666666554
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=42.65 E-value=50 Score=26.23 Aligned_cols=64 Identities=9% Similarity=-0.059 Sum_probs=40.0
Q ss_pred cccchhhhhCCCCCCeEEEEeec--------ceEEEEeCC-CC---ceeeEEeeccccccccccccCCcccccccCCC
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGYSK--------GLVVLWDRT-TN---TANQISTMNIVSDRDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg~~--------G~VVl~d~~-~~---~~~~~~~v~l~~~~es~~W~~~~~~~~~~~~d 74 (118)
...+..+++.|. .++|+.+... ..|-+||.. +. +.... ...-.....++.|..++++...+..+
T Consensus 187 ~~~~~~~~~SpD-G~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l-~~~~~~~~~~~~~spdg~l~~~~~~~ 262 (662)
T 3azo_A 187 HRFVTGPRLSPD-GRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTL-LGGPEEAIAQAEWAPDGSLIVATDRT 262 (662)
T ss_dssp SSEECCCEECTT-SSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEE-EEETTBCEEEEEECTTSCEEEEECTT
T ss_pred CCcccCceECCC-CCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEe-CCCCCceEcceEECCCCeEEEEECCC
Confidence 456777889996 8888877754 478899987 45 33322 22111334567898888865544434
No 175
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=42.65 E-value=38 Score=24.50 Aligned_cols=55 Identities=9% Similarity=0.077 Sum_probs=35.7
Q ss_pred chhhhhCCCCCCeEEEEeec--ceEEEEeCC--CCce--eeEEeeccccccccccccCCccccc
Q psy8836 12 VEAIAEQPGSPNHIIVGYSK--GLVVLWDRT--TNTA--NQISTMNIVSDRDSFVWKGHARLSV 69 (118)
Q Consensus 12 V~~I~~cP~ds~~LlIgg~~--G~VVl~d~~--~~~~--~~~~~v~l~~~~es~~W~~~~~~~~ 69 (118)
...|++.|. .+.|.++... +.|.+|+.. +.+. +..+... ....++.|..+++...
T Consensus 261 ~~~i~~spd-g~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g--~~~~~~~~spdg~~l~ 321 (361)
T 3scy_A 261 SGDIHLSPD-GKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTG--IHPRNFIITPNGKYLL 321 (361)
T ss_dssp EEEEEECTT-SSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECS--SCCCEEEECTTSCEEE
T ss_pred cccEEECCC-CCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCC--CCCceEEECCCCCEEE
Confidence 357889996 7778887775 899999764 3442 2222222 3456778888887443
No 176
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=42.13 E-value=20 Score=28.32 Aligned_cols=56 Identities=11% Similarity=0.118 Sum_probs=37.9
Q ss_pred chhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCccccccc
Q psy8836 12 VEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKH 71 (118)
Q Consensus 12 V~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~ 71 (118)
+...++.|...+.+++.+..+.+.|||..+.+..+..... ..++.|..+|+.-...
T Consensus 112 ~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~----~~~~~~spDG~~la~~ 167 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP----GFGFVSDIRGDLIAGL 167 (582)
T ss_dssp BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES----SCEEEEEEETTEEEEE
T ss_pred ceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC----CceEEECCCCCEEEEE
Confidence 3355788875566778888888899999888765443322 1566777777765533
No 177
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=42.07 E-value=43 Score=24.50 Aligned_cols=50 Identities=12% Similarity=0.058 Sum_probs=36.1
Q ss_pred CCCeEEEEee--cceEEEEeCCCCceeeEEeeccccccccccccCCcccccccC
Q psy8836 21 SPNHIIVGYS--KGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 21 ds~~LlIgg~--~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~ 72 (118)
+.++|.|+.. ++.|.+||..+.+++..+.+. ....++.....+++.+.+.
T Consensus 139 ~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g--~~p~~i~~~~dG~l~v~~~ 190 (328)
T 3dsm_A 139 YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG--IQPTSLVMDKYNKMWTITD 190 (328)
T ss_dssp ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS--SCBCCCEECTTSEEEEEBC
T ss_pred ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC--CCccceEEcCCCCEEEEEC
Confidence 4788999973 789999999999887766554 4445666666677666544
No 178
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=42.01 E-value=23 Score=27.96 Aligned_cols=38 Identities=16% Similarity=0.124 Sum_probs=29.3
Q ss_pred EEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCccc
Q psy8836 25 IIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARL 67 (118)
Q Consensus 25 LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~ 67 (118)
++++.+.|.|.+||.++....+ +.+...+++|...|..
T Consensus 139 ~av~~~dG~L~v~dl~~~~~~~-----~~~~Vs~v~WSpkG~~ 176 (388)
T 1xip_A 139 LVILNSVNDLSALDLRTKSTKQ-----LAQNVTSFDVTNSQLA 176 (388)
T ss_dssp EEEEETTSEEEEEETTTCCEEE-----EEESEEEEEECSSEEE
T ss_pred EEEEECCCCEEEEEccCCcccc-----ccCCceEEEEcCCceE
Confidence 8888899999999988776543 2256778999988843
No 179
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=39.23 E-value=27 Score=25.04 Aligned_cols=55 Identities=16% Similarity=0.143 Sum_probs=33.4
Q ss_pred chhhhhCCCCCCeEEEE-eecceEEEEeCCCCceeeEEeeccccccccccccCCcccccc
Q psy8836 12 VEAIAEQPGSPNHIIVG-YSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVK 70 (118)
Q Consensus 12 V~~I~~cP~ds~~LlIg-g~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~ 70 (118)
-|...|+|. .+.|++. ...+.|..||..+.+.. .+... ....++.+..++++.++
T Consensus 15 ~Egp~w~~~-~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~--~~~~~i~~~~dG~l~v~ 70 (297)
T 3g4e_A 15 GESPVWEEV-SNSLLFVDIPAKKVCRWDSFTKQVQ-RVTMD--APVSSVALRQSGGYVAT 70 (297)
T ss_dssp EEEEEEETT-TTEEEEEETTTTEEEEEETTTCCEE-EEECS--SCEEEEEEBTTSSEEEE
T ss_pred ccCCeEECC-CCEEEEEECCCCEEEEEECCCCcEE-EEeCC--CceEEEEECCCCCEEEE
Confidence 456778886 5555554 45688888988777653 33333 44455666666665444
No 180
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=38.24 E-value=22 Score=26.14 Aligned_cols=55 Identities=4% Similarity=-0.033 Sum_probs=34.5
Q ss_pred chhhhhCCCCCCeEE-EEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccc
Q psy8836 12 VEAIAEQPGSPNHII-VGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVK 70 (118)
Q Consensus 12 V~~I~~cP~ds~~Ll-Igg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~ 70 (118)
.+.+.|+|. .+.|+ ++...+.|..||..+++.. .+... ....++.|..++++.+.
T Consensus 51 ~egp~~~~~-~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~--~~v~~i~~~~dg~l~v~ 106 (326)
T 2ghs_A 51 GEGPTFDPA-SGTAWWFNILERELHELHLASGRKT-VHALP--FMGSALAKISDSKQLIA 106 (326)
T ss_dssp EEEEEEETT-TTEEEEEEGGGTEEEEEETTTTEEE-EEECS--SCEEEEEEEETTEEEEE
T ss_pred CcCCeEeCC-CCEEEEEECCCCEEEEEECCCCcEE-EEECC--CcceEEEEeCCCeEEEE
Confidence 366788887 45554 4456789999998877653 33333 44556666666665543
No 181
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=37.80 E-value=28 Score=28.14 Aligned_cols=54 Identities=9% Similarity=0.090 Sum_probs=37.1
Q ss_pred hhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeeccc--cccccccccCCccccc
Q psy8836 14 AIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIV--SDRDSFVWKGHARLSV 69 (118)
Q Consensus 14 ~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~--~~~es~~W~~~~~~~~ 69 (118)
.++|.|. . +++..+..|.|.+||..+.+....+...-. ....++.|..+|+...
T Consensus 20 ~~~~s~d-g-~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la 75 (719)
T 1z68_A 20 FPNWISG-Q-EYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVY 75 (719)
T ss_dssp CCEESSS-S-EEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEE
T ss_pred ccEECCC-C-eEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEE
Confidence 5678886 4 677777789999999988887654433200 0256778888887543
No 182
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=37.04 E-value=51 Score=23.71 Aligned_cols=54 Identities=11% Similarity=-0.063 Sum_probs=33.9
Q ss_pred chhhhhCCCCCCeEEEEeec---ceEEEEeCCCCceeeEEeeccccc-cccccccCCcccc
Q psy8836 12 VEAIAEQPGSPNHIIVGYSK---GLVVLWDRTTNTANQISTMNIVSD-RDSFVWKGHARLS 68 (118)
Q Consensus 12 V~~I~~cP~ds~~LlIgg~~---G~VVl~d~~~~~~~~~~~v~l~~~-~es~~W~~~~~~~ 68 (118)
+..+++.|. .++|+.+... ..|.+||..+.+..+..... .. ...+.|..+++..
T Consensus 38 ~~~~~~Spd-G~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~--~~~~~~~~~spdg~~l 95 (396)
T 3c5m_A 38 FYQKCFTQD-GKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGK--GDNTFGGFISTDERAF 95 (396)
T ss_dssp TTSCCBCTT-SCEEEEEECTTSSCEEEEEETTTTEEEECCCSS--CBCTTTCEECTTSSEE
T ss_pred eecCcCCCC-CCEEEEEEecCCCceEEEEECCCCcEEEeecCC--CCccccceECCCCCEE
Confidence 677889996 7777666543 37788898887765332221 12 2236687777655
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=36.55 E-value=27 Score=24.71 Aligned_cols=59 Identities=8% Similarity=0.052 Sum_probs=36.8
Q ss_pred ccchhhhhCCCCCC-eEEEEeecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccC
Q psy8836 10 GAVEAIAEQPGSPN-HIIVGYSKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 10 ~aV~~I~~cP~ds~-~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~ 72 (118)
...+.+.+.|. .+ .+.++...|.|..||..++ . ..+... .....++.+...+++.++..
T Consensus 28 ~~~eg~~~d~~-g~~l~~~~~~~~~i~~~~~~~~-~-~~~~~~-~~~~~~l~~~~dg~l~v~~~ 87 (296)
T 3e5z_A 28 TWTEGPVYVPA-RSAVIFSDVRQNRTWAWSDDGQ-L-SPEMHP-SHHQNGHCLNKQGHLIACSH 87 (296)
T ss_dssp SSEEEEEEEGG-GTEEEEEEGGGTEEEEEETTSC-E-EEEESS-CSSEEEEEECTTCCEEEEET
T ss_pred ccccCCeEeCC-CCEEEEEeCCCCEEEEEECCCC-e-EEEECC-CCCcceeeECCCCcEEEEec
Confidence 35677888987 55 5666677899999998877 3 333322 02234555666666655544
No 184
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=36.54 E-value=25 Score=29.02 Aligned_cols=51 Identities=10% Similarity=0.177 Sum_probs=34.4
Q ss_pred hhhCCCCCCeEEEEeec---------ceEEEEeCCCCceeeEEeeccccccccccccCCcccc
Q psy8836 15 IAEQPGSPNHIIVGYSK---------GLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLS 68 (118)
Q Consensus 15 I~~cP~ds~~LlIgg~~---------G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~ 68 (118)
+++.|. -++|+.++.. |.+.+||..+++..+..... .....+.|..+|+.-
T Consensus 67 ~~~Spd-g~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~--~~~~~~~~SPdG~~l 126 (740)
T 4a5s_A 67 YSISPD-GQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIP--NNTQWVTWSPVGHKL 126 (740)
T ss_dssp EEECTT-SSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC--TTEEEEEECSSTTCE
T ss_pred eEECCC-CCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCC--CcceeeEECCCCCEE
Confidence 677996 8888888875 77889999988765322111 234456677766643
No 185
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=36.53 E-value=67 Score=23.19 Aligned_cols=36 Identities=11% Similarity=-0.063 Sum_probs=28.4
Q ss_pred chhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEE
Q psy8836 12 VEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIS 48 (118)
Q Consensus 12 V~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~ 48 (118)
+....++|. .++|+.+...+.|.+||..+.+....+
T Consensus 83 ~~~~~~spd-g~~l~~~~~~~~l~~~d~~~g~~~~~~ 118 (388)
T 3pe7_A 83 TFGGFLSPD-DDALFYVKDGRNLMRVDLATLEENVVY 118 (388)
T ss_dssp SSSCEECTT-SSEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred ccceEEcCC-CCEEEEEeCCCeEEEEECCCCcceeee
Confidence 336789996 888998888889999999888765443
No 186
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=36.20 E-value=24 Score=28.15 Aligned_cols=58 Identities=7% Similarity=-0.079 Sum_probs=37.7
Q ss_pred cccchhhhhCCCCCCeEEEEeec----------ceEEEEeCCC------CceeeEE-eeccccccccccccCCccccc
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGYSK----------GLVVLWDRTT------NTANQIS-TMNIVSDRDSFVWKGHARLSV 69 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg~~----------G~VVl~d~~~------~~~~~~~-~v~l~~~~es~~W~~~~~~~~ 69 (118)
...+..++|.|. .++|+.+... ..|.+||..+ .+..... .-. ....++.|..+|+.-.
T Consensus 129 ~~~~~~~~~spD-g~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~SpDG~~la 203 (662)
T 3azo_A 129 GLRWADPVLLPE-RGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAH--RFVTGPRLSPDGRQAV 203 (662)
T ss_dssp CEEEEEEEEETT-TTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCS--SEECCCEECTTSSEEE
T ss_pred CccccCcEECCC-CCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCC--CcccCceECCCCCEEE
Confidence 346778899996 7777777665 5899999887 5543222 111 2345667888887543
No 187
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=35.97 E-value=58 Score=23.91 Aligned_cols=54 Identities=7% Similarity=-0.077 Sum_probs=32.9
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCC-CCceeeEEeeccccccccccccCCcc
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRT-TNTANQISTMNIVSDRDSFVWKGHAR 66 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~-~~~~~~~~~v~l~~~~es~~W~~~~~ 66 (118)
.+..++++|. .+.|.++... .|.+||.. +.+...............+.|..+++
T Consensus 41 ~~~~~a~spd-g~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~ 95 (365)
T 1jof_A 41 PISWMTFDHE-RKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTR 95 (365)
T ss_dssp CCSEEEECTT-SSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCE
T ss_pred CCcEEEECCC-CCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCC
Confidence 4667888886 6667777665 89999875 55554332221101234466777776
No 188
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=34.89 E-value=37 Score=25.20 Aligned_cols=61 Identities=2% Similarity=-0.013 Sum_probs=40.8
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeecc--------ccccccccccCCcccccccC
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNI--------VSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l--------~~~~es~~W~~~~~~~~~~~ 72 (118)
-...|+.+|.+...+++.-++..++.+|...+ ++.++..+= ..+-|+++....|.+.+.++
T Consensus 174 d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE 242 (255)
T 3qqz_A 174 DVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSE 242 (255)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEET
T ss_pred CceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcC
Confidence 35678889984444455566688888897766 655555440 12457888888888887766
No 189
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=34.77 E-value=61 Score=22.50 Aligned_cols=59 Identities=12% Similarity=0.104 Sum_probs=32.4
Q ss_pred cchhhhhCCCCCCeEEEEee--cceEEEEeCCCCceeeEEeeccccccccccccCCccccccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGYS--KGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKH 71 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~--~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~ 71 (118)
.+..|+..+. .++|+|+.. .+.|.+||. +.+.+..+...-.....++....++++.+..
T Consensus 78 ~p~~i~~~~~-~g~l~v~~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 138 (286)
T 1q7f_A 78 YPNRVAVVRN-SGDIIVTERSPTHQIQIYNQ-YGQFVRKFGATILQHPRGVTVDNKGRIIVVE 138 (286)
T ss_dssp SEEEEEEETT-TTEEEEEECGGGCEEEEECT-TSCEEEEECTTTCSCEEEEEECTTSCEEEEE
T ss_pred CceEEEEEcC-CCeEEEEcCCCCCEEEEECC-CCcEEEEecCccCCCceEEEEeCCCCEEEEE
Confidence 4455666444 678888875 789999994 4444433322111123344455555555543
No 190
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=33.78 E-value=45 Score=27.19 Aligned_cols=62 Identities=5% Similarity=0.007 Sum_probs=40.3
Q ss_pred ccchhhhhCCCCCCeEEEEee-----cceEEEEeCCCCceeeEEeeccccc-cccccccCCcccccccCCC
Q psy8836 10 GAVEAIAEQPGSPNHIIVGYS-----KGLVVLWDRTTNTANQISTMNIVSD-RDSFVWKGHARLSVKHTGD 74 (118)
Q Consensus 10 ~aV~~I~~cP~ds~~LlIgg~-----~G~VVl~d~~~~~~~~~~~v~l~~~-~es~~W~~~~~~~~~~~~d 74 (118)
..+..+++.|. .++|+.+.. ...|.+||..+++.+....+. .. ..++.|..+++.......|
T Consensus 121 ~~~~~~~~SPD-G~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~~~~~~~~wspDg~~l~~~~~d 188 (695)
T 2bkl_A 121 VSLGTWAVSWD-GKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIE--GGKYATPKWTPDSKGFYYEWLP 188 (695)
T ss_dssp EEEEEEEECTT-SSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBS--CCTTCCCEECTTSSEEEEEECC
T ss_pred EEEEEEEECCC-CCEEEEEECCCCCceEEEEEEECCCCCCcCCcccC--cccccceEEecCCCEEEEEEec
Confidence 46888899996 777775543 248999999988764110111 11 1578899998876655444
No 191
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=33.27 E-value=65 Score=26.54 Aligned_cols=55 Identities=11% Similarity=0.062 Sum_probs=37.9
Q ss_pred cchhhhhCCCCCCeEEEEeec-----ceEEEEeCCCCceeeEEeeccccccccccccCCccccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSK-----GLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSV 69 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~-----G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~ 69 (118)
.+..+++.|. .++|+.+... .+|.+||..+++.+....-+ ....++.|..+ +...
T Consensus 164 ~~~~~~~SPD-G~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~--~~~~~~~wspD-~~l~ 223 (741)
T 1yr2_A 164 ALDAWAASDD-GRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKW--VKFSGLAWLGN-DALL 223 (741)
T ss_dssp EEEEEEECTT-SSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEE--EESCCCEESTT-SEEE
T ss_pred EEEeEEECCC-CCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCC--ceeccEEEECC-CEEE
Confidence 6778899996 8888877665 46899999999886432212 11357889777 5443
No 192
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=32.20 E-value=20 Score=28.27 Aligned_cols=56 Identities=5% Similarity=-0.061 Sum_probs=38.5
Q ss_pred cchhhhhCCCCCCeEEEEeecceEEEEeCCCCce--eeEEee--ccc------cccccccccCCccccc
Q psy8836 11 AVEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTA--NQISTM--NIV------SDRDSFVWKGHARLSV 69 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~--~~~~~v--~l~------~~~es~~W~~~~~~~~ 69 (118)
.|..++|+|+ | +.+|...|.+.+|+....++ ...+.. ++- ....++.|-..+++.+
T Consensus 164 ~Vs~v~WSpk--G-~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv 229 (388)
T 1xip_A 164 NVTSFDVTNS--Q-LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLA 229 (388)
T ss_dssp SEEEEEECSS--E-EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEE
T ss_pred CceEEEEcCC--c-eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEE
Confidence 6889999997 3 78999999999997766664 222211 000 2245778988877765
No 193
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=30.59 E-value=77 Score=22.74 Aligned_cols=34 Identities=12% Similarity=-0.150 Sum_probs=27.2
Q ss_pred hhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEe
Q psy8836 15 IAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQIST 49 (118)
Q Consensus 15 I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~ 49 (118)
+.|.|. .++|+.+...++|.+||..+.+....+.
T Consensus 86 ~~~spd-g~~l~~~~~~~~l~~~d~~~~~~~~~~~ 119 (396)
T 3c5m_A 86 GFISTD-ERAFFYVKNELNLMKVDLETLEEQVIYT 119 (396)
T ss_dssp CEECTT-SSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred ceECCC-CCEEEEEEcCCcEEEEECCCCCcEEEEe
Confidence 778996 8889888888999999988877654433
No 194
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=28.47 E-value=78 Score=23.16 Aligned_cols=40 Identities=15% Similarity=0.174 Sum_probs=29.6
Q ss_pred cccchhhhhCCCCCCeEEEEeec------ceEEEEeCCCCceeeEEee
Q psy8836 9 PGAVEAIAEQPGSPNHIIVGYSK------GLVVLWDRTTNTANQISTM 50 (118)
Q Consensus 9 p~aV~~I~~cP~ds~~LlIgg~~------G~VVl~d~~~~~~~~~~~v 50 (118)
...+..|+..|+ ++|.|.... +.|++||..+.+.+..+..
T Consensus 66 ~~~p~gv~~d~~--g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~ 111 (343)
T 2qe8_A 66 FDTVLGIKSDGN--GIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYL 111 (343)
T ss_dssp CSCEEEEEECSS--SEEEEEECHHHHTSCCEEEEEETTTTEEEEEEEC
T ss_pred eeEeeEEEEcCC--CcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEEC
Confidence 346777888875 678887653 7899999998887666554
No 195
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=26.95 E-value=88 Score=24.62 Aligned_cols=37 Identities=8% Similarity=-0.022 Sum_probs=29.9
Q ss_pred hhhhhCCCCCCeEEEEee--cceEEEEeCCCCceeeEEee
Q psy8836 13 EAIAEQPGSPNHIIVGYS--KGLVVLWDRTTNTANQISTM 50 (118)
Q Consensus 13 ~~I~~cP~ds~~LlIgg~--~G~VVl~d~~~~~~~~~~~v 50 (118)
..++..|. -++|.|+.. ++.|.++|..+.+++..+.+
T Consensus 140 ~~~a~spD-Gk~lyVan~~~~~~VsVID~~t~~vv~tI~v 178 (386)
T 3sjl_D 140 WMTSLTPD-GKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV 178 (386)
T ss_dssp GGEEECTT-SSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred ceEEEcCC-CCEEEEEEcCCCCeEEEEECCCCcEEEEEEC
Confidence 35778886 889999964 68999999999999876643
No 196
>3ktp_B Trinucleotide repeat-containing gene 6C protein; protein-protein complex, methylation, mRNA processing, mRNA nucleus, phosphoprotein, RNA-binding; 1.50A {Homo sapiens}
Probab=25.89 E-value=19 Score=17.42 Aligned_cols=10 Identities=30% Similarity=0.604 Sum_probs=7.8
Q ss_pred eeeCCCCCCe
Q psy8836 86 KSVSPGFQPT 95 (118)
Q Consensus 86 ~~~p~G~Q~~ 95 (118)
..+||+|||.
T Consensus 4 ~sWpPef~pg 13 (22)
T 3ktp_B 4 INWPPEFHPG 13 (26)
T ss_pred ccCCcccccC
Confidence 3699999875
No 197
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=25.33 E-value=69 Score=24.34 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=28.4
Q ss_pred cchhhhhCCCCCC-eEEEEe-ecceEEEEeCCCCceeeE
Q psy8836 11 AVEAIAEQPGSPN-HIIVGY-SKGLVVLWDRTTNTANQI 47 (118)
Q Consensus 11 aV~~I~~cP~ds~-~LlIgg-~~G~VVl~d~~~~~~~~~ 47 (118)
....|++.|. -+ .|+++. .++.|.+||..+.+++..
T Consensus 319 ~p~~i~~s~D-g~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 319 DVDAISVAQD-GGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CcCeEEECCC-CCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 4567888886 55 677766 489999999999998755
No 198
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=25.32 E-value=99 Score=21.46 Aligned_cols=33 Identities=12% Similarity=0.085 Sum_probs=24.2
Q ss_pred cchhhhhCCCCCCeEEEE--------eecceEEEEeCCCCcee
Q psy8836 11 AVEAIAEQPGSPNHIIVG--------YSKGLVVLWDRTTNTAN 45 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIg--------g~~G~VVl~d~~~~~~~ 45 (118)
..+.+++.+. +.|.++ ...|.|..||..+.+..
T Consensus 19 ~~~~~~~~~~--g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~ 59 (314)
T 1pjx_A 19 GAEGPVFDKN--GDFYIVAPEVEVNGKPAGEILRIDLKTGKKT 59 (314)
T ss_dssp TCEEEEECTT--SCEEEEETTCEETTEECCEEEEECTTTCCEE
T ss_pred CccCceECCC--CCEEEEEeccccCCCCCCEEEEEeCCCCcEE
Confidence 4567788854 567776 66788999998777664
No 199
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=24.72 E-value=59 Score=23.22 Aligned_cols=58 Identities=12% Similarity=0.019 Sum_probs=33.7
Q ss_pred cchhhhhCCCCCCeEEEEe-ecceEEEEeCCCCceeeEEeeccccccccccccCCcccccccC
Q psy8836 11 AVEAIAEQPGSPNHIIVGY-SKGLVVLWDRTTNTANQISTMNIVSDRDSFVWKGHARLSVKHT 72 (118)
Q Consensus 11 aV~~I~~cP~ds~~LlIgg-~~G~VVl~d~~~~~~~~~~~v~l~~~~es~~W~~~~~~~~~~~ 72 (118)
-.+...|.|+ .+.|++.+ ..|.|..|+. +.+.. .+... .....++.|...+++.++.+
T Consensus 46 ~~egp~~~~~-g~~l~~~d~~~~~i~~~~~-~g~~~-~~~~~-~~~~~gl~~d~dG~l~v~~~ 104 (305)
T 3dr2_A 46 WSEGPAWWEA-QRTLVWSDLVGRRVLGWRE-DGTVD-VLLDA-TAFTNGNAVDAQQRLVHCEH 104 (305)
T ss_dssp SEEEEEEEGG-GTEEEEEETTTTEEEEEET-TSCEE-EEEES-CSCEEEEEECTTSCEEEEET
T ss_pred CccCCeEeCC-CCEEEEEECCCCEEEEEeC-CCCEE-EEeCC-CCccceeeECCCCCEEEEEC
Confidence 4566778886 56455544 5688888987 34432 22211 02245566776777666654
No 200
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=23.92 E-value=86 Score=22.56 Aligned_cols=45 Identities=7% Similarity=0.070 Sum_probs=26.8
Q ss_pred CeEEEEeecceEEEEeCCCCceeeEEeecccc--ccccccccCCccccc
Q psy8836 23 NHIIVGYSKGLVVLWDRTTNTANQISTMNIVS--DRDSFVWKGHARLSV 69 (118)
Q Consensus 23 ~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~--~~es~~W~~~~~~~~ 69 (118)
+.|+.+...+.|.+||.++.+++-.+... . ...++....++++.+
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~--~~~~~~~~~~~pdG~ilv 52 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLE--KGWECNSVAATKAGEILF 52 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECC--TTCCCCEEEECTTSCEEE
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCC--ccCCCcCeEECCCCCEEE
Confidence 44445555799999999888887554433 2 233333444455444
No 201
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=23.85 E-value=1.1e+02 Score=22.95 Aligned_cols=26 Identities=12% Similarity=0.102 Sum_probs=22.0
Q ss_pred CCCeEEEEeecceEEEEeCCCCceee
Q psy8836 21 SPNHIIVGYSKGLVVLWDRTTNTANQ 46 (118)
Q Consensus 21 ds~~LlIgg~~G~VVl~d~~~~~~~~ 46 (118)
+.++|.+|+..|.|..||..+.+.+-
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W 33 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKW 33 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEE
Confidence 36788999999999999999888863
No 202
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=23.28 E-value=1.5e+02 Score=21.56 Aligned_cols=33 Identities=0% Similarity=-0.069 Sum_probs=23.8
Q ss_pred cchhhh-hCCCCCCeEEEEeecc------eEEEEeCC-CCce
Q psy8836 11 AVEAIA-EQPGSPNHIIVGYSKG------LVVLWDRT-TNTA 44 (118)
Q Consensus 11 aV~~I~-~cP~ds~~LlIgg~~G------~VVl~d~~-~~~~ 44 (118)
.+..|+ +.|. .+.|.++...+ .|.+|+.. +.+.
T Consensus 255 ~~~~i~~~spd-G~~l~v~~~~~~~~~~~~i~v~~~~~~g~~ 295 (365)
T 1jof_A 255 YRADVCALTFS-GKYMFASSRANKFELQGYIAGFKLRDCGSI 295 (365)
T ss_dssp EEEEEEEECTT-SSEEEEEEEESSTTSCCEEEEEEECTTSCE
T ss_pred ccccEEEECCC-CCEEEEECCCCCCCCCCeEEEEEECCCCCE
Confidence 466788 9996 77888776543 79999875 4443
No 203
>2pof_A CDP-diacylglycerol pyrophosphatase; NYSGXRC, PFAM02611, PSI-2, phospholipid biosynthesis structural genomics, protein structure initiative; 1.40A {Escherichia coli} SCOP: d.13.1.4
Probab=22.28 E-value=34 Score=25.64 Aligned_cols=14 Identities=29% Similarity=0.527 Sum_probs=11.9
Q ss_pred Chheeeeeeccccc
Q psy8836 103 PAAVTSLVLHTEWG 116 (118)
Q Consensus 103 p~~ITala~~s~~g 116 (118)
|..-.+|||||.||
T Consensus 96 pd~~lsLaINS~~g 109 (227)
T 2pof_A 96 PDRAVSLAINSRTG 109 (227)
T ss_dssp CGGGEEEEEBCGGG
T ss_pred CccceEEEecCCCC
Confidence 55677999999998
No 204
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=22.08 E-value=1.3e+02 Score=24.71 Aligned_cols=54 Identities=0% Similarity=0.038 Sum_probs=33.7
Q ss_pred chhhhhCCCCCCeEEEEeecceEEEEeCCCCceeeEEeecccc----ccccccccCCcccc
Q psy8836 12 VEAIAEQPGSPNHIIVGYSKGLVVLWDRTTNTANQISTMNIVS----DRDSFVWKGHARLS 68 (118)
Q Consensus 12 V~~I~~cP~ds~~LlIgg~~G~VVl~d~~~~~~~~~~~v~l~~----~~es~~W~~~~~~~ 68 (118)
...++|.|. . ++++.+ .|.|.+||..+++....+...-.. ..+++.|..+++.-
T Consensus 19 ~~~~~w~~d-g-~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l 76 (740)
T 4a5s_A 19 LYSLRWISD-H-EYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFI 76 (740)
T ss_dssp CCCEEECSS-S-EEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEE
T ss_pred ccccEECCC-C-cEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEE
Confidence 457889986 4 555555 899999999888765443332111 11235667777643
No 205
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=21.88 E-value=1.4e+02 Score=23.74 Aligned_cols=37 Identities=14% Similarity=0.020 Sum_probs=30.5
Q ss_pred hhhhhCCCCCCeEEEEee--cceEEEEeCCCCceeeEEee
Q psy8836 13 EAIAEQPGSPNHIIVGYS--KGLVVLWDRTTNTANQISTM 50 (118)
Q Consensus 13 ~~I~~cP~ds~~LlIgg~--~G~VVl~d~~~~~~~~~~~v 50 (118)
..+...|. .++|.|+.. ++.|.+.|..+.+++..+.+
T Consensus 180 ~~~~~spD-Gk~lyV~n~~~~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 180 WMNALTPD-NKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp GGSEECTT-SSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred ceEEEcCC-CCEEEEEecCCCCeEEEEECCCCeEEEEEEc
Confidence 57888996 899999864 68899999999999876654
Done!