Query psy8840
Match_columns 355
No_of_seqs 291 out of 1721
Neff 7.4
Searched_HMMs 29240
Date Fri Aug 16 20:30:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8840.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8840hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b6u_A Kinesin-like protein KI 100.0 7.1E-77 2.4E-81 579.2 14.5 258 2-260 115-372 (372)
2 2y65_A Kinesin, kinesin heavy 100.0 7.7E-75 2.6E-79 564.4 16.5 263 2-269 98-362 (365)
3 3cob_A Kinesin heavy chain-lik 100.0 7.7E-74 2.6E-78 557.7 21.1 255 2-273 93-350 (369)
4 2vvg_A Kinesin-2; motor protei 100.0 8.2E-74 2.8E-78 554.4 16.3 245 2-254 103-348 (350)
5 3bfn_A Kinesin-like protein KI 100.0 2.4E-73 8.2E-78 556.2 17.0 249 2-258 112-364 (388)
6 2owm_A Nckin3-434, related to 100.0 8.6E-73 2.9E-77 562.2 20.4 252 2-258 150-431 (443)
7 1t5c_A CENP-E protein, centrom 100.0 7.3E-73 2.5E-77 547.9 17.7 248 2-254 91-341 (349)
8 1goj_A Kinesin, kinesin heavy 100.0 1.1E-72 3.6E-77 547.9 18.6 247 2-253 94-342 (355)
9 2zfi_A Kinesin-like protein KI 100.0 9.7E-73 3.3E-77 550.6 16.5 247 2-249 103-362 (366)
10 1x88_A Kinesin-like protein KI 100.0 4.1E-72 1.4E-76 544.9 14.9 245 2-249 102-358 (359)
11 2wbe_C Bipolar kinesin KRP-130 100.0 7.8E-72 2.7E-76 545.1 14.2 247 2-251 114-371 (373)
12 1bg2_A Kinesin; motor protein, 100.0 2.2E-71 7.6E-76 533.1 14.1 234 2-241 91-325 (325)
13 3lre_A Kinesin-like protein KI 100.0 9.4E-71 3.2E-75 534.6 17.0 234 2-241 119-355 (355)
14 3gbj_A KIF13B protein; kinesin 100.0 1.5E-70 5.2E-75 532.9 16.1 237 2-241 106-350 (354)
15 2h58_A Kinesin-like protein KI 100.0 5.9E-70 2E-74 524.2 19.7 233 2-242 94-329 (330)
16 2nr8_A Kinesin-like protein KI 100.0 8.4E-71 2.9E-75 534.8 12.6 237 2-241 117-358 (358)
17 4a14_A Kinesin, kinesin-like p 100.0 6.5E-70 2.2E-74 527.2 18.2 238 2-239 97-344 (344)
18 3nwn_A Kinesin-like protein KI 100.0 1.3E-70 4.3E-75 533.7 12.5 237 2-241 118-359 (359)
19 1f9v_A Kinesin-like protein KA 100.0 3.6E-69 1.2E-73 522.0 17.4 236 2-246 98-346 (347)
20 2rep_A Kinesin-like protein KI 100.0 5E-69 1.7E-73 525.1 17.5 235 2-241 129-376 (376)
21 1ry6_A Internal kinesin; kines 100.0 4.2E-69 1.4E-73 523.2 16.6 239 2-250 98-340 (360)
22 3t0q_A AGR253WP; kinesin, alph 100.0 1.3E-68 4.3E-73 518.9 19.7 235 2-245 99-348 (349)
23 4etp_A Kinesin-like protein KA 100.0 1.5E-67 5.3E-72 519.9 18.1 236 2-246 154-402 (403)
24 2heh_A KIF2C protein; kinesin, 100.0 1.4E-67 4.9E-72 515.3 14.8 231 2-244 148-385 (387)
25 1v8k_A Kinesin-like protein KI 100.0 2E-67 7E-72 517.2 14.2 233 2-246 168-407 (410)
26 3u06_A Protein claret segregat 100.0 2.9E-66 9.9E-71 511.1 14.8 231 2-245 152-386 (412)
27 3dc4_A Kinesin-like protein NO 100.0 2.1E-65 7E-70 494.5 14.4 227 2-246 108-340 (344)
28 4h1g_A Maltose binding protein 100.0 3.2E-64 1.1E-68 530.8 19.3 232 2-242 476-712 (715)
29 2kin_B Kinesin; motor protein, 100.0 4.8E-35 1.6E-39 232.6 5.0 97 167-263 2-99 (100)
30 3kin_B Kinesin heavy chain; mo 100.0 1.2E-32 4.3E-37 225.8 8.0 98 170-267 1-99 (117)
31 2o0a_A S.cerevisiae chromosome 98.8 4.4E-09 1.5E-13 97.2 5.1 197 1-248 96-296 (298)
32 3oja_B Anopheles plasmodium-re 89.2 2.1 7.2E-05 43.0 10.9 38 315-352 544-581 (597)
33 3oja_B Anopheles plasmodium-re 88.5 7.5 0.00026 38.9 14.5 27 215-241 391-417 (597)
34 3bas_A Myosin heavy chain, str 86.9 8.1 0.00028 29.0 11.1 29 243-271 3-31 (89)
35 2dfs_A Myosin-5A; myosin-V, in 83.4 6.1 0.00021 43.2 11.2 34 16-49 405-440 (1080)
36 3ghg_A Fibrinogen alpha chain; 80.8 2.8 9.6E-05 41.5 6.6 17 257-273 60-76 (562)
37 3o0z_A RHO-associated protein 79.5 16 0.00055 30.8 10.1 14 336-349 118-131 (168)
38 2v71_A Nuclear distribution pr 76.4 15 0.00051 31.7 9.2 16 258-273 21-36 (189)
39 3oja_A Leucine-rich immune mol 73.4 41 0.0014 32.7 12.9 10 295-304 422-431 (487)
40 3hnw_A Uncharacterized protein 73.3 21 0.0007 29.1 8.9 30 323-352 104-133 (138)
41 3i00_A HIP-I, huntingtin-inter 72.8 34 0.0012 27.2 12.2 27 248-274 9-35 (120)
42 1gmj_A ATPase inhibitor; coile 72.7 26 0.00089 26.0 8.4 33 318-350 47-79 (84)
43 2fxo_A Myosin heavy chain, car 72.2 22 0.00075 28.5 8.8 24 248-271 7-30 (129)
44 3hnw_A Uncharacterized protein 68.5 27 0.00093 28.4 8.6 34 319-352 93-126 (138)
45 2l5g_B Putative uncharacterize 67.9 8.9 0.0003 24.6 4.3 33 318-350 5-37 (42)
46 1deq_A Fibrinogen (alpha chain 66.6 25 0.00085 33.5 9.0 17 257-273 63-79 (390)
47 2dfs_A Myosin-5A; myosin-V, in 65.5 38 0.0013 37.0 11.5 8 114-121 655-662 (1080)
48 3vkg_A Dynein heavy chain, cyt 60.0 14 0.00049 44.8 7.4 16 257-272 1937-1952(3245)
49 3o0z_A RHO-associated protein 57.2 86 0.003 26.3 9.8 19 316-334 63-81 (168)
50 1gmj_A ATPase inhibitor; coile 57.2 43 0.0015 24.8 7.0 43 294-343 37-79 (84)
51 3mq9_A Bone marrow stromal ant 56.1 1.2E+02 0.0043 28.9 12.6 6 48-53 131-136 (471)
52 1i84_S Smooth muscle myosin he 53.8 88 0.003 34.3 12.0 37 16-52 431-470 (1184)
53 1t6f_A Geminin; coiled-coil, c 52.5 30 0.001 21.3 4.5 28 316-343 8-35 (37)
54 3tnu_A Keratin, type I cytoske 51.6 89 0.003 24.8 10.0 15 256-270 40-54 (131)
55 3iv1_A Tumor susceptibility ge 49.3 74 0.0025 23.2 9.2 39 313-351 37-75 (78)
56 2yy0_A C-MYC-binding protein; 48.3 39 0.0013 22.7 5.2 28 318-345 22-49 (53)
57 2yy0_A C-MYC-binding protein; 46.5 26 0.00089 23.6 4.0 31 323-353 20-50 (53)
58 3na7_A HP0958; flagellar bioge 45.9 1.6E+02 0.0054 26.0 12.2 15 256-270 69-83 (256)
59 3iox_A AGI/II, PA; alpha helix 45.8 2.3E+02 0.0079 27.9 12.7 18 254-271 9-26 (497)
60 3mq7_A Bone marrow stromal ant 43.6 1.2E+02 0.004 23.9 9.8 27 319-345 82-108 (121)
61 3mq9_A Bone marrow stromal ant 43.5 1.7E+02 0.0057 28.0 11.2 18 216-233 278-295 (471)
62 3vkg_A Dynein heavy chain, cyt 43.1 1.3E+02 0.0044 36.9 11.7 9 114-122 1777-1785(3245)
63 3tnu_B Keratin, type II cytosk 41.6 1.3E+02 0.0044 23.7 11.5 18 254-271 36-53 (129)
64 1m1j_C Fibrinogen gamma chain; 41.0 2.5E+02 0.0085 26.9 12.6 26 327-352 110-135 (409)
65 3ljm_A Coil Ser L9C; de novo d 40.7 49 0.0017 19.0 3.9 13 337-349 16-28 (31)
66 2v66_B Nuclear distribution pr 40.6 1.3E+02 0.0044 23.5 9.2 21 254-274 3-23 (111)
67 1m1j_A Fibrinogen alpha subuni 40.6 2.1E+02 0.0071 27.9 10.7 18 257-274 61-78 (491)
68 1ses_A Seryl-tRNA synthetase; 39.8 2.3E+02 0.008 27.1 11.4 32 315-346 64-95 (421)
69 1m1j_B Fibrinogen beta chain; 39.7 1.1E+02 0.0038 29.9 9.0 16 337-352 176-191 (464)
70 2pnv_A Small conductance calci 38.8 42 0.0014 21.6 3.9 16 337-352 17-32 (43)
71 2w83_C C-JUN-amino-terminal ki 38.1 1.1E+02 0.0039 22.1 7.5 24 327-350 49-72 (77)
72 1go4_E MAD1 (mitotic arrest de 37.4 81 0.0028 24.2 6.0 26 325-350 71-96 (100)
73 1aq5_A Matrilin-1, CMP, cartil 35.9 50 0.0017 21.7 3.9 22 332-353 26-47 (47)
74 1a93_B MAX protein, coiled coi 34.8 72 0.0025 19.4 4.2 26 324-349 9-34 (34)
75 3efg_A Protein SLYX homolog; x 34.3 88 0.003 22.7 5.6 33 319-351 32-64 (78)
76 1go4_E MAD1 (mitotic arrest de 33.8 58 0.002 25.0 4.7 29 324-352 14-42 (100)
77 4h22_A Leucine-rich repeat fli 33.2 1.6E+02 0.0056 22.5 9.2 34 319-352 48-81 (103)
78 3ghg_A Fibrinogen alpha chain; 30.2 97 0.0033 30.8 6.7 14 338-351 178-191 (562)
79 3twe_A Alpha4H; unknown functi 29.7 47 0.0016 18.5 2.6 15 338-352 10-24 (27)
80 3nmd_A CGMP dependent protein 29.1 1.3E+02 0.0046 21.5 5.6 12 337-348 55-66 (72)
81 3ol1_A Vimentin; structural ge 27.9 2.1E+02 0.0073 22.2 11.5 13 259-271 18-30 (119)
82 2oqq_A Transcription factor HY 27.9 1.2E+02 0.004 19.3 4.5 11 323-333 7-17 (42)
83 4etp_A Kinesin-like protein KA 27.2 1.5E+02 0.005 28.3 7.5 32 321-352 30-61 (403)
84 2wuj_A Septum site-determining 25.6 65 0.0022 21.8 3.4 37 313-352 21-57 (57)
85 1i84_S Smooth muscle myosin he 25.2 2.5E+02 0.0087 30.7 9.8 19 253-271 856-874 (1184)
86 4dci_A Uncharacterized protein 24.8 2.9E+02 0.0098 22.6 7.8 30 243-272 18-47 (150)
87 2zet_C Melanophilin; complex, 24.7 1.6E+02 0.0053 24.2 6.2 38 311-348 16-53 (153)
88 1wle_A Seryl-tRNA synthetase; 24.2 5.1E+02 0.018 25.3 11.2 28 319-346 120-147 (501)
89 1ic2_A Tropomyosin alpha chain 24.0 2E+02 0.0069 20.6 7.7 30 320-349 46-75 (81)
90 2jee_A YIIU; FTSZ, septum, coi 23.9 2.2E+02 0.0074 20.9 9.1 26 327-352 53-78 (81)
91 1f5n_A Interferon-induced guan 23.8 5.6E+02 0.019 25.6 11.7 15 336-350 567-581 (592)
92 2ke4_A CDC42-interacting prote 23.2 1.7E+02 0.0059 22.1 5.7 27 325-351 65-91 (98)
93 3tul_A Cell invasion protein S 21.9 3.1E+02 0.011 22.4 7.2 31 322-352 62-92 (158)
94 3u06_A Protein claret segregat 21.8 1.7E+02 0.006 27.9 6.8 32 321-352 30-61 (412)
95 1t3u_A Conserved hypothetical 21.7 2.5E+02 0.0087 20.9 9.1 31 290-320 26-56 (104)
96 4e81_A Chaperone protein DNAK; 21.4 3.9E+02 0.013 22.9 9.1 22 312-333 169-190 (219)
97 1use_A VAsp, vasodilator-stimu 20.5 1E+02 0.0034 20.0 3.2 19 252-270 13-31 (45)
98 1deq_A Fibrinogen (alpha chain 20.3 4.9E+02 0.017 24.7 9.2 19 289-307 112-130 (390)
No 1
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=100.00 E-value=7.1e-77 Score=579.22 Aligned_cols=258 Identities=76% Similarity=1.130 Sum_probs=221.6
Q ss_pred eEEeecCCCCCCCCCCchHHHHHHHHHHhhhcCCceEEEEEEEEEEEcchhccccCCcccccccceecCCCCeEEcCceE
Q psy8840 2 YKYMIIGSKESAESKGVIPNSFDQIFSHIARTENKQYLIRASYLEIYQEEIRDLLDKDQSKRYELRENPDSGVYVKNLQS 81 (355)
Q Consensus 2 KTyTm~G~~~~~~~~GIipra~~~lF~~i~~~~~~~~~v~vS~~EIyne~v~DLL~~~~~~~l~i~e~~~~~~~v~~l~~ 81 (355)
|||||+|...+++.+|||||++++||..+...++..|.|+|||+|||||+|+|||++....++.++++++++++|.||++
T Consensus 115 KTyTM~G~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~l~i~e~~~~~v~v~gl~~ 194 (372)
T 3b6u_A 115 KTYTMEGIRGDPEKRGVIPNSFDHIFTHISRSQNQQYLVRASYLEIYQEEIRDLLSKDQTKRLELKERPDTGVYVKDLSS 194 (372)
T ss_dssp HHHHHTBCTTSGGGBCHHHHHHHHHHHHHHTCSSCEEEEEEEEEEEETTEEEETTSSCTTCCBCEEEETTTEEEETTCCC
T ss_pred CCEeEecCCCCcccCCcHHHHHHHHHHHhhhccCCceEEEEEEEEEeCCEEEECCCCCCCCCceEEECCCCcEecCCCEE
Confidence 89999999888888999999999999999988889999999999999999999999877788999999999999999999
Q ss_pred EEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCccccCCCcccc
Q psy8840 82 YICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSERQSKTGATGK 161 (355)
Q Consensus 82 ~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~t~~~g~ 161 (355)
+.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|++.....++. ..+..|+|+|||||||||..++++.|.
T Consensus 195 ~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~-~~~~~skL~lVDLAGSEr~~~t~~~g~ 273 (372)
T 3b6u_A 195 FVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGLDGE-NHIRVGKLNLVDLAGSERQAKTGAQGE 273 (372)
T ss_dssp EECCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTSEEEEEEEEEEEC-----C-CCEEEEEEEEEECCCCCE---------
T ss_pred EEecCHHHHHHHHHHHHHhcCcccccCCCCCCcceEEEEEEEEEeecCCCCC-cceEEEEEEEEECCCCccccccCcchh
Confidence 9999999999999999999999999999999999999999999876543333 457889999999999999999999999
Q ss_pred chHHHHhhhhhhHHHHHHHHHHhCCCCCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHHHHHHHHHHhccC
Q psy8840 162 RLKEASKINLSLSALGNVISALVDGKNIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESLTTLRYANRAKNI 241 (355)
Q Consensus 162 ~~~E~~~IN~SL~~L~~vI~aL~~~~~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTlsTL~fa~rak~I 241 (355)
+++|+.+||+||++||+||.+|++++..|||||||||||||||+|||||+|+|||||||+..+++||++||+||+||++|
T Consensus 274 rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETlsTLrfA~rak~I 353 (372)
T 3b6u_A 274 RLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNI 353 (372)
T ss_dssp -EEEGGGCCHHHHHHHHHHHHHHCC---CCCGGGSHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTC
T ss_pred hhhhHhhhhhhHHHHHHHHHHHhcCCCCCCcccccHHHHHHHHhcCCCccEEEEEEeCCcccCHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999988789999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCchHHHHHHHH
Q psy8840 242 KNQPRVNEDPKEALLREYQ 260 (355)
Q Consensus 242 ~n~~~~n~~~~~~~~~~l~ 260 (355)
+|+|.+|+++.++++++|+
T Consensus 354 ~n~~~~n~~~~~~~~~~~~ 372 (372)
T 3b6u_A 354 KNKPRVNEDPKDALLREFQ 372 (372)
T ss_dssp BCCCCCCC-----------
T ss_pred cccceecCChHHHHHHhcC
Confidence 9999999999999988875
No 2
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=100.00 E-value=7.7e-75 Score=564.44 Aligned_cols=263 Identities=45% Similarity=0.682 Sum_probs=220.7
Q ss_pred eEEeecCCCCCCCCCCchHHHHHHHHHHhhhcC-CceEEEEEEEEEEEcchhccccCCcccccccceecCCCCeEEcCce
Q psy8840 2 YKYMIIGSKESAESKGVIPNSFDQIFSHIARTE-NKQYLIRASYLEIYQEEIRDLLDKDQSKRYELRENPDSGVYVKNLQ 80 (355)
Q Consensus 2 KTyTm~G~~~~~~~~GIipra~~~lF~~i~~~~-~~~~~v~vS~~EIyne~v~DLL~~~~~~~l~i~e~~~~~~~v~~l~ 80 (355)
|||||+|+..++..+|||||++++||..+.... +..|.|+|||+|||||+|+|||++. ...+.+++|+.++++|.|++
T Consensus 98 KTyTm~G~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~-~~~l~i~e~~~~~~~v~gl~ 176 (365)
T 2y65_A 98 KTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVS-KVNLSVHEDKNRVPYVKGAT 176 (365)
T ss_dssp HHHHHTBSTTCTTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEEETTEEEETTCTT-CCSBCEEECSSSCEEETTCC
T ss_pred CceEEecCCCCcccCChHHHHHHHHHHHHHhccCCceEEEEEEEEEEECCeeeecccCC-cCCceEEECCCCCEEecCCE
Confidence 899999988888889999999999999997754 7799999999999999999999876 56799999999999999999
Q ss_pred EEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCccccCCCccc
Q psy8840 81 SYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSERQSKTGATG 160 (355)
Q Consensus 81 ~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~t~~~g 160 (355)
++.|.|++|++.+|..|..+|++++|.||..|||||+||+|+|.+..... .....|+|+|||||||||.+++++.|
T Consensus 177 ~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~----~~~~~skL~lVDLAGSEr~~~t~~~g 252 (365)
T 2y65_A 177 ERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLEN----QKKLSGKLYLVDLAGSEKVSKTGAEG 252 (365)
T ss_dssp CEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETTT----CCEEEEEEEEEECCCCCC--------
T ss_pred EEecCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEEEecCC----CCEeEEEEEEEECCCCCcchhcCCcc
Confidence 99999999999999999999999999999999999999999998876432 34578999999999999999999999
Q ss_pred cchHHHHhhhhhhHHHHHHHHHHhCCCCCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHHHHHHHHHHhcc
Q psy8840 161 KRLKEASKINLSLSALGNVISALVDGKNIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESLTTLRYANRAKN 240 (355)
Q Consensus 161 ~~~~E~~~IN~SL~~L~~vI~aL~~~~~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTlsTL~fa~rak~ 240 (355)
.+++|+.+||+||++||+||.+|++++..|||||||||||||||+|||||+|+|||||||+..+++||++||+||+||++
T Consensus 253 ~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~ 332 (365)
T 2y65_A 253 TVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKT 332 (365)
T ss_dssp --------CCHHHHHHHHHHHHHHHCCCSCCCGGGCHHHHHTGGGTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccCHHHHHHHhhcCCCccEEEEEEecCccCCHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999998777999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCch-HHHHHHHHHHHHHHHHH
Q psy8840 241 IKNQPRVNEDPK-EALLREYQEEIQRLKNL 269 (355)
Q Consensus 241 I~n~~~~n~~~~-~~~~~~l~~ei~~Lk~~ 269 (355)
|+|.|.+|+++. +.++++|++|+.+++..
T Consensus 333 I~n~~~~n~~~~~~~~~~~~~~e~~~~~~L 362 (365)
T 2y65_A 333 VKNVVCVNEELTAEEWKRRYEKEKEKNARL 362 (365)
T ss_dssp CEEECCCEEECCSHHHHHC-----------
T ss_pred ccCcceeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999765 46777888888877643
No 3
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=100.00 E-value=7.7e-74 Score=557.75 Aligned_cols=255 Identities=40% Similarity=0.641 Sum_probs=234.5
Q ss_pred eEEeecCCCCCCCCCCchHHHHHHHHHHhhhcC-CceEEEEEEEEEEEcchhccccCCcc--cccccceecCCCCeEEcC
Q psy8840 2 YKYMIIGSKESAESKGVIPNSFDQIFSHIARTE-NKQYLIRASYLEIYQEEIRDLLDKDQ--SKRYELRENPDSGVYVKN 78 (355)
Q Consensus 2 KTyTm~G~~~~~~~~GIipra~~~lF~~i~~~~-~~~~~v~vS~~EIyne~v~DLL~~~~--~~~l~i~e~~~~~~~v~~ 78 (355)
|||||+|++.++ |||||++++||..+.... ...|.|++||+|||||+|+|||.+.. ...+.+++|+.++++|.|
T Consensus 93 KTyTM~G~~~~~---Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~l~i~e~~~~~~~v~g 169 (369)
T 3cob_A 93 KTFTIYGADSNP---GLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKKDSKGMVSVEN 169 (369)
T ss_dssp HHHHHTBCSSSB---CHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSCEEESSCCSSSCCCCCEEEECTTSCEEEET
T ss_pred CeEeecCCCCCC---chhHHHHHHHHHHHHhhccCceeEEEEEEEEEeCceeeecCCCcccCCcceEEEECCCCCEEccC
Confidence 899999987554 999999999999998876 46999999999999999999998753 357999999999999999
Q ss_pred ceEEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCccccCCCc
Q psy8840 79 LQSYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSERQSKTGA 158 (355)
Q Consensus 79 l~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~t~~ 158 (355)
++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|++.+... .....|+|+|||||||||..++++
T Consensus 170 l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~----~~~~~skL~lVDLAGSEr~~~t~~ 245 (369)
T 3cob_A 170 VTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQT----QAIARGKLSFVDLAGSERVKKSGS 245 (369)
T ss_dssp CCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETTT----CCEEEEEEEEEECCCSSCCCCCSS
T ss_pred CEEEEeCCHHHHHHHHHHHhhcceeecccCCCCCCcceEEEEEEEEEecCCC----CcEEEEEEEEEeCCCCCcccccCc
Confidence 9999999999999999999999999999999999999999999998876532 346889999999999999999999
Q ss_pred cccchHHHHhhhhhhHHHHHHHHHHhCCCCCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHHHHHHHHHHh
Q psy8840 159 TGKRLKEASKINLSLSALGNVISALVDGKNIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESLTTLRYANRA 238 (355)
Q Consensus 159 ~g~~~~E~~~IN~SL~~L~~vI~aL~~~~~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTlsTL~fa~ra 238 (355)
.|.+++|+.+||+||++||+||.+|++++ .|||||||||||||||+|||||+|+|||||||+..+++||++||+||+||
T Consensus 246 ~g~rl~E~~~INkSL~aLg~vI~aL~~~~-~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETl~TLrfA~ra 324 (369)
T 3cob_A 246 AGNQLKEAQSINKSLSALGDVISALSSGN-QHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRV 324 (369)
T ss_dssp CSHHHHHHHHHTHHHHHHHHHHHHHHTTC-SCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhcCC-CcCCCcCCHHHHHHHHhcCCCccEEEEEEeCCccccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999875 49999999999999999999999999999999999999999999999999
Q ss_pred ccCccccccCCCchHHHHHHHHHHHHHHHHHHhhc
Q psy8840 239 KNIKNQPRVNEDPKEALLREYQEEIQRLKNLLNQR 273 (355)
Q Consensus 239 k~I~n~~~~n~~~~~~~~~~l~~ei~~Lk~~l~~~ 273 (355)
++|+|.|.+|+++ +||.+||.+|...
T Consensus 325 k~i~~~~~~n~~~---------~ei~~L~~~l~~~ 350 (369)
T 3cob_A 325 RSIVNDPSKNVSS---------KEVARLKKLVSYW 350 (369)
T ss_dssp HTCBCCCCCCEEC---------HHHHHHHHHTTCC
T ss_pred hhcccCCcccCCH---------HHHHHHHHHHHHH
Confidence 9999999999988 4555555555433
No 4
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=100.00 E-value=8.2e-74 Score=554.38 Aligned_cols=245 Identities=59% Similarity=0.904 Sum_probs=203.5
Q ss_pred eEEeecCCCCCCCCCCchHHHHHHHHHHhhh-cCCceEEEEEEEEEEEcchhccccCCcccccccceecCCCCeEEcCce
Q psy8840 2 YKYMIIGSKESAESKGVIPNSFDQIFSHIAR-TENKQYLIRASYLEIYQEEIRDLLDKDQSKRYELRENPDSGVYVKNLQ 80 (355)
Q Consensus 2 KTyTm~G~~~~~~~~GIipra~~~lF~~i~~-~~~~~~~v~vS~~EIyne~v~DLL~~~~~~~l~i~e~~~~~~~v~~l~ 80 (355)
|||||+|+... +|||||++++||..+.. .++..|.|++||+|||||+|+|||++ ..++.+++|+.++++|.|++
T Consensus 103 KTyTm~G~~~~---~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~--~~~l~i~e~~~~~~~v~gl~ 177 (350)
T 2vvg_A 103 KTWTMGGNKEE---PGAIPNSFKHLFDAINSSSSNQNFLVIGSYLELYNEEIRDLIKN--NTKLPLKEDKTRGIYVDGLS 177 (350)
T ss_dssp HHHHHTBCSSS---BCHHHHHHHHHHHHHHTCCTTEEEEEEEEEEEEETTEEEETTTT--EEEECEEEETTTEEEETTCC
T ss_pred CCEEeecCCcc---CchHHHHHHHHHHHHHhhccCCcEEEEEEEEEEeCCEEEEcccC--CcCceeeEcCCCCEEecCCE
Confidence 89999998754 49999999999999985 44789999999999999999999985 56899999999999999999
Q ss_pred EEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCccccCCCccc
Q psy8840 81 SYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSERQSKTGATG 160 (355)
Q Consensus 81 ~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~t~~~g 160 (355)
++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|++....... ..+..|+|+|||||||||.+++++.|
T Consensus 178 ~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~--~~~~~skl~lVDLAGSEr~~~t~~~g 255 (350)
T 2vvg_A 178 MHRVTTAAELSALMDKGFANRHVAATQMNDTSSRSHSIFMVRIECSEVIENK--EVIRVGKLNLVDLAGSERQSKTGATG 255 (350)
T ss_dssp CEEESSHHHHHHHHHHHHHHC----------CTTCEEEEEEEEEEEEC------CEEEEEEEEEEECCCCCC--------
T ss_pred EEEcCCHHHHHHHHHHHHhccccccccCCCCCCcceEEEEEEEEEeeccCCC--ccEEEEEEEEEeCCCCCccccccccH
Confidence 9999999999999999999999999999999999999999999887654222 45688999999999999999999999
Q ss_pred cchHHHHhhhhhhHHHHHHHHHHhCCCCCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHHHHHHHHHHhcc
Q psy8840 161 KRLKEASKINLSLSALGNVISALVDGKNIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESLTTLRYANRAKN 240 (355)
Q Consensus 161 ~~~~E~~~IN~SL~~L~~vI~aL~~~~~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTlsTL~fa~rak~ 240 (355)
.+++|+.+||+||++||+||.+|++++ .|||||||||||||||+|||||+|+|||||||+..+++||++||+||+||++
T Consensus 256 ~rl~E~~~IN~SL~aLg~vI~aL~~~~-~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~ 334 (350)
T 2vvg_A 256 ETLVEGAKINLSLSALGLVISKLVEGA-THIPYRDSKLTRLLQDSLGGNSKTLMCANISPASTNYDETMSTLRYADRAKQ 334 (350)
T ss_dssp -------CTTHHHHHHHHHHHHHHHTC-SSCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHcCC-CCCCccccHHHHHHHHhcCCCccEEEEEEeCCccccHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999876 5999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCchHH
Q psy8840 241 IKNQPRVNEDPKEA 254 (355)
Q Consensus 241 I~n~~~~n~~~~~~ 254 (355)
|+|+|.+|+++.++
T Consensus 335 i~n~~~~n~~~~~~ 348 (350)
T 2vvg_A 335 IKNKPRINEDPKDA 348 (350)
T ss_dssp CBCCCCCCBSCTTC
T ss_pred ccccceecCCchhc
Confidence 99999999998754
No 5
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.4e-73 Score=556.24 Aligned_cols=249 Identities=39% Similarity=0.598 Sum_probs=193.0
Q ss_pred eEEeecCCCCCCCCCCchHHHHHHHHHHhhhc----CCceEEEEEEEEEEEcchhccccCCcccccccceecCCCCeEEc
Q psy8840 2 YKYMIIGSKESAESKGVIPNSFDQIFSHIART----ENKQYLIRASYLEIYQEEIRDLLDKDQSKRYELRENPDSGVYVK 77 (355)
Q Consensus 2 KTyTm~G~~~~~~~~GIipra~~~lF~~i~~~----~~~~~~v~vS~~EIyne~v~DLL~~~~~~~l~i~e~~~~~~~v~ 77 (355)
|||||+|++.. +|||||++++||..+... ....|.|+|||+|||||+|+|||++. ...+.+++|+.++++|.
T Consensus 112 KTyTM~G~~~~---~Giipra~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~-~~~l~ired~~~~v~v~ 187 (388)
T 3bfn_A 112 KTHTMLGSPEQ---PGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLLDPA-SGDLVIREDCRGNILIP 187 (388)
T ss_dssp HHHHHTBCSSS---BCHHHHHHHHHHHHHHHHTSTTCSEEEEEEEEEEEEETTEEEESSSCS-SCBCCCEECTTSCEECT
T ss_pred CCeEeecCccc---cchhHHHHHHHHHHHHHhhccCCCceEEEEEEEEEEECCeeeehhccC-CCCceEEEcCCCCEEec
Confidence 89999998655 499999999999999763 35689999999999999999999886 46799999999999999
Q ss_pred CceEEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCccccCCC
Q psy8840 78 NLQSYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSERQSKTG 157 (355)
Q Consensus 78 ~l~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~t~ 157 (355)
||+++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|++...... .....|+|+|||||||||..+++
T Consensus 188 gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~---~~~~~skL~lVDLAGSEr~~~t~ 264 (388)
T 3bfn_A 188 GLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQRERLAP---FRQREGKLYLIDLAGSEDNRRTG 264 (388)
T ss_dssp TCCCEECCSHHHHHHHHHHHTC-----------CGGGSEEEEEEEEEEEESSTT---CCEEEEEEEEEECCCTTC-----
T ss_pred cceEEEeCCHHHHHHHHHHHhhccccccccCCCCCCCCeEEEEEEEEEeccCCC---CceeEEEEEEEECCCCccccccc
Confidence 999999999999999999999999999999999999999999999988754322 23578999999999999999999
Q ss_pred ccccchHHHHhhhhhhHHHHHHHHHHhCCCCCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHHHHHHHHHH
Q psy8840 158 ATGKRLKEASKINLSLSALGNVISALVDGKNIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESLTTLRYANR 237 (355)
Q Consensus 158 ~~g~~~~E~~~IN~SL~~L~~vI~aL~~~~~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTlsTL~fa~r 237 (355)
+.|.+++|+.+||+||++||+||.+|++++. |||||||||||||||+|||||+|+|||||||+..+++||++||+||+|
T Consensus 265 ~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~-hVPYRdSkLTrlLqdsLgGnskT~mIa~iSP~~~~~~ETlsTLrfA~r 343 (388)
T 3bfn_A 265 NKGLRLKESGAINTSLFVLGKVVDALNQGLP-RVPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYLDTVSALNFAAR 343 (388)
T ss_dssp ---------CCCCHHHHHHHHHHHHHHTTCS-CCCGGGSHHHHHTTTSSSTTCEEEEEEEECCSGGGHHHHHHHHHHHCS
T ss_pred CccchhHHHhHhhhhHHHHHHHHHHHhcCCC-CCcCcccHHHHHHHHhhCCCccEEEEEEECCccccHHHHHHHHHHHHH
Confidence 9999999999999999999999999998765 999999999999999999999999999999999999999999999999
Q ss_pred hccCccccccCCCchHHHHHH
Q psy8840 238 AKNIKNQPRVNEDPKEALLRE 258 (355)
Q Consensus 238 ak~I~n~~~~n~~~~~~~~~~ 258 (355)
|++|+|+|.+|+++....+..
T Consensus 344 ak~I~n~p~~n~~~~~~~l~~ 364 (388)
T 3bfn_A 344 SKEVINRPFTNESLQPHALGP 364 (388)
T ss_dssp EEEEC----------------
T ss_pred HhhCcCcCcccCCCCHHHHHH
Confidence 999999999999887655543
No 6
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=100.00 E-value=8.6e-73 Score=562.24 Aligned_cols=252 Identities=45% Similarity=0.706 Sum_probs=205.3
Q ss_pred eEEeecCCCCCCCCCCchHHHHHHHHHHhhhc----CCceEEEEEEEEEEEcchhccccCCc----ccccccceecCCCC
Q psy8840 2 YKYMIIGSKESAESKGVIPNSFDQIFSHIART----ENKQYLIRASYLEIYQEEIRDLLDKD----QSKRYELRENPDSG 73 (355)
Q Consensus 2 KTyTm~G~~~~~~~~GIipra~~~lF~~i~~~----~~~~~~v~vS~~EIyne~v~DLL~~~----~~~~l~i~e~~~~~ 73 (355)
|||||+|+++.+ |||||++++||..+... ++..|.|+|||+|||||+|+|||++. +...+.+++|+.+|
T Consensus 150 KTyTM~G~~~~~---GIipr~~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~~~~~~l~ire~~~~g 226 (443)
T 2owm_A 150 KSYTMMGTPDQP---GLIPRTCEDLFQRIASAQDETPNISYNVKVSYFEVYNEHVRDLLAPVVPNKPPYYLKVRESPTEG 226 (443)
T ss_dssp HHHHHTCCTTSC---CHHHHHHHHHHHHHHHTTTTSTTCEEEEEEEEEEEETTEEEETTSCCCSSCCCCCCEEEEETTTE
T ss_pred CCEEeecCCCCC---chHHHHHHHHHHHHHhhhcccCCceEEEEEEEEEEECCEeeEccCccccCCcccccceeECCCCC
Confidence 899999986554 99999999999999864 36799999999999999999999873 23469999999999
Q ss_pred eEEcCceEEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCccc
Q psy8840 74 VYVKNLQSYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSERQ 153 (355)
Q Consensus 74 ~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsEr~ 153 (355)
++|.||+++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|++..............|+|+|||||||||.
T Consensus 227 ~~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~~~~~~~~~~~skL~lVDLAGSER~ 306 (443)
T 2owm_A 227 PYVKDLTEVPVRGLEEIIRWMRIGDGSRTVASTKMNDTSSRSHAVFTIMLKQIHHDLETDDTTERSSRIRLVDLAGSERA 306 (443)
T ss_dssp EEEETCCCEECCSHHHHHHHHHHHHTTSCBCSSSSSCBCTTEEEEEEEEEEEEC-------CCEEEEEEEEEECCCCCC-
T ss_pred EeccCCEEEEcCCHHHHHHHHHHHHhhCCcccCcCCCccCCCeEEEEEEEEEeecccCCCCcceEEEEEEEEECCCCccc
Confidence 99999999999999999999999999999999999999999999999999886543333334567899999999999999
Q ss_pred cCCCccccchHHHHhhhhhhHHHHHHHHHHhCCCC---------------------CcccCCCCcccccccccCCCCceE
Q psy8840 154 SKTGATGKRLKEASKINLSLSALGNVISALVDGKN---------------------IHVPYRDSKLTRLLQDSLGGNSKT 212 (355)
Q Consensus 154 ~~t~~~g~~~~E~~~IN~SL~~L~~vI~aL~~~~~---------------------~~iPyRdSkLT~lL~dsLgGnskt 212 (355)
.++++.|.|++|+.+||+||++||+||.+|++++. .|||||||||||||||+|||||+|
T Consensus 307 ~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~g~~~~~~~~~~hVPYRdSkLTrLLqdsLgGnskT 386 (443)
T 2owm_A 307 KSTEATGQRLREGSNINKSLTTLGRVIAALADPKSSASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKT 386 (443)
T ss_dssp -------------CCSSHHHHHHHHHHHHHCC-------------------------CCCGGGSHHHHHSTTTTTSSCEE
T ss_pred cccCCccccccchhhhcHHHHHHHHHHHHHhcccccccccccccccccccccccCCCcccCcccHhHHHHHHhhCCCCcE
Confidence 99999999999999999999999999999987542 399999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhccCccccccCC-CchHHHHHH
Q psy8840 213 LMIANIGPASYNYEESLTTLRYANRAKNIKNQPRVNE-DPKEALLRE 258 (355)
Q Consensus 213 ~mI~~vsp~~~~~~eTlsTL~fa~rak~I~n~~~~n~-~~~~~~~~~ 258 (355)
+|||||||+ +++||++||+||+|||+|+|+|.+|+ ++..+..++
T Consensus 387 ~mIa~iSP~--~~~ETlsTLrfA~rak~I~n~~~vN~~d~~~~~~~~ 431 (443)
T 2owm_A 387 AMIACISPT--DYDETLSTLRYADQAKRIRTRAVVNQVDGVSAAERD 431 (443)
T ss_dssp EEEEEECSS--CHHHHHHHHHHHHHHTTCEECCCCCCC---------
T ss_pred EEEEEeccc--cHHHHHHHHHHHHHHhhccccceecccCCccHHHHH
Confidence 999999997 59999999999999999999999999 666554443
No 7
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=100.00 E-value=7.3e-73 Score=547.91 Aligned_cols=248 Identities=45% Similarity=0.690 Sum_probs=219.3
Q ss_pred eEEeecCCCCCCCCCCchHHHHHHHHHHhhhcCCceEEEEEEEEEEEcchhccccCCcc-cccccceecCCCCeEEcCce
Q psy8840 2 YKYMIIGSKESAESKGVIPNSFDQIFSHIARTENKQYLIRASYLEIYQEEIRDLLDKDQ-SKRYELRENPDSGVYVKNLQ 80 (355)
Q Consensus 2 KTyTm~G~~~~~~~~GIipra~~~lF~~i~~~~~~~~~v~vS~~EIyne~v~DLL~~~~-~~~l~i~e~~~~~~~v~~l~ 80 (355)
|||||+|+++. +|||||++++||..++..++..|.|+|||+|||||+|+|||++.. .+++.+++|+.++++|.||+
T Consensus 91 KTyTM~G~~~~---~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~ed~~~~~~v~gl~ 167 (349)
T 1t5c_A 91 KTYTMMGSEDH---LGVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNETITDLLCGTQKMKPLIIREDVNRNVYVADLT 167 (349)
T ss_dssp HHHHHTBCSSS---BCHHHHHHHHHHHHGGGCTTEEEEEEEEEEEEETTEEEESSSSSCTTCCEEEEETTTTEEEETTCC
T ss_pred CCeEEecCCCC---CchHHHHHHHHHHHHHhCcCCcEEEEEEEEEEeCCEEEEccCCCCCCCCceEEECCCCCEEecCCE
Confidence 89999998655 499999999999999998889999999999999999999998753 46799999999999999999
Q ss_pred EEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCC-CCceEEEEEEEeecCCCCccccCCCcc
Q psy8840 81 SYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDS-SMSQVRVGKLNLVDLAGSERQSKTGAT 159 (355)
Q Consensus 81 ~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~-~~~~~~~s~L~~VDLAGsEr~~~t~~~ 159 (355)
++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|++....... ....+..|+|+|||||||||..++++.
T Consensus 168 ~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~ 247 (349)
T 1t5c_A 168 EEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNCEGSVKVSHLNLVDLAGSERAAQTGAA 247 (349)
T ss_dssp CEECSSHHHHHHHHHHHHHTTSSSSSSSSCTTTTCEEEEEEEEEEEECC-------CEEEEEEEEEECCCGGGTC-----
T ss_pred EEEeCCHHHHHHHHHHhhcccccccccCCCCCCCceEEEEEEEEEeccCCCcCcCccEEEEEEEEEECCCCccccccCCc
Confidence 9999999999999999999999999999999999999999999987654322 123568899999999999999999999
Q ss_pred ccchHHHHhhhhhhHHHHHHHHHHhCCC-CCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHHHHHHHHHHh
Q psy8840 160 GKRLKEASKINLSLSALGNVISALVDGK-NIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESLTTLRYANRA 238 (355)
Q Consensus 160 g~~~~E~~~IN~SL~~L~~vI~aL~~~~-~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTlsTL~fa~ra 238 (355)
|.|++|+.+||+||++||+||.+|++++ ..|||||||||||||||+|||||+|+|||||||+ +++||++||+||+||
T Consensus 248 g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~--~~~ETlsTL~fA~ra 325 (349)
T 1t5c_A 248 GVRLKEGCNINRSLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITPV--SFDETLTALQFASTA 325 (349)
T ss_dssp --CCCSSSCCCHHHHHHHHHHHHHHHTCCTTSSCGGGSHHHHHTGGGTTSSSEEEEEEEECTT--CSHHHHHHHHHHHHH
T ss_pred cccchhhhHHhHHHHHHHHHHHHHhccCCCCCCcccccHHHHHHHHhcCCCceEEEEEEeCCC--CHHHHHHHHHHHHHH
Confidence 9999999999999999999999999875 3699999999999999999999999999999997 589999999999999
Q ss_pred ccCccccccCCCchHH
Q psy8840 239 KNIKNQPRVNEDPKEA 254 (355)
Q Consensus 239 k~I~n~~~~n~~~~~~ 254 (355)
++|+|+|.+|+++...
T Consensus 326 k~I~n~~~vn~~~~~~ 341 (349)
T 1t5c_A 326 KYMKNTPYVNEVSTDE 341 (349)
T ss_dssp TTCCCCCCCCEEC---
T ss_pred hhcccCceeccCCCCC
Confidence 9999999999987644
No 8
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=100.00 E-value=1.1e-72 Score=547.95 Aligned_cols=247 Identities=51% Similarity=0.799 Sum_probs=231.6
Q ss_pred eEEeecCCC-CCCCCCCchHHHHHHHHHHhhhcC-CceEEEEEEEEEEEcchhccccCCcccccccceecCCCCeEEcCc
Q psy8840 2 YKYMIIGSK-ESAESKGVIPNSFDQIFSHIARTE-NKQYLIRASYLEIYQEEIRDLLDKDQSKRYELRENPDSGVYVKNL 79 (355)
Q Consensus 2 KTyTm~G~~-~~~~~~GIipra~~~lF~~i~~~~-~~~~~v~vS~~EIyne~v~DLL~~~~~~~l~i~e~~~~~~~v~~l 79 (355)
|||||+|+. ++++.+|||||++++||..+.... +..|.|+|||+|||||+|+|||++. ...+.+++++.+|++|.|+
T Consensus 94 KTyTm~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~-~~~l~i~e~~~~g~~v~gl 172 (355)
T 1goj_A 94 KSYTMMGTSIDDPDGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQ-NDNLPVHEEKNRGVYVKGL 172 (355)
T ss_dssp HHHHHTBSCTTSTTTBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSTT-CCSCCEEEETTTEEEETTC
T ss_pred cceEeecCCCCCcccCCchHHHHHHHHHHHHhcccCceEEEEEEEEEEECCEEEEcccCc-cCCceeEEcCCCCEeecCC
Confidence 899999964 346778999999999999997754 6799999999999999999999986 4679999999999999999
Q ss_pred eEEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCccccCCCcc
Q psy8840 80 QSYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSERQSKTGAT 159 (355)
Q Consensus 80 ~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~t~~~ 159 (355)
+++.|.|++|++.+|..|..+|++++|.||..|||||+||+|+|++..... +....|+|+|||||||||.+++++.
T Consensus 173 ~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~----~~~~~skL~lVDLAGSEr~~~t~~~ 248 (355)
T 1goj_A 173 LEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVET----GSAKSGQLFLVDLAGSEKVGKTGAS 248 (355)
T ss_dssp CCEECCSHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEETTT----TEEEEEEEEEEECCCCSCCTTSSSC
T ss_pred EEEeCCCHHHHHHHHHHHHhhcCcccccCCCCCCCceEEEEEEEEEeccCC----CceeeeEEEEEECCCCCcccccccc
Confidence 999999999999999999999999999999999999999999998876432 3568899999999999999999999
Q ss_pred ccchHHHHhhhhhhHHHHHHHHHHhCCCCCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHHHHHHHHHHhc
Q psy8840 160 GKRLKEASKINLSLSALGNVISALVDGKNIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESLTTLRYANRAK 239 (355)
Q Consensus 160 g~~~~E~~~IN~SL~~L~~vI~aL~~~~~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTlsTL~fa~rak 239 (355)
|.+++|+.+||+||++||+||.+|++++..|||||||||||||||+|||||+|+|||||||+..+++||++||+||+|||
T Consensus 249 g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGns~t~mI~~isP~~~~~~ETl~TL~fA~rak 328 (355)
T 1goj_A 249 GQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLSTLRFGMRAK 328 (355)
T ss_dssp CCCTTTTGGGTSHHHHHHHHHHHHHHCSCSCCCGGGCHHHHHTGGGTTSSCEEEEEEEECCBGGGHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCccCHHHHHHHHHhCCCCcEEEEEEECcccccHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999877899999999999999999999999999999999999999999999999999
Q ss_pred cCccccccCCCchH
Q psy8840 240 NIKNQPRVNEDPKE 253 (355)
Q Consensus 240 ~I~n~~~~n~~~~~ 253 (355)
+|+|+|++|+++..
T Consensus 329 ~I~n~~~vn~~~~~ 342 (355)
T 1goj_A 329 SIKNKAKVNAELSP 342 (355)
T ss_dssp TCBCCCCCCSSSSC
T ss_pred hccCCceeCCCCCH
Confidence 99999999997654
No 9
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=100.00 E-value=9.7e-73 Score=550.57 Aligned_cols=247 Identities=47% Similarity=0.749 Sum_probs=211.9
Q ss_pred eEEeecCCCCCCCCCCchHHHHHHHHHHhhhcC--CceEEEEEEEEEEEcchhccccCCcccccccceecCCCCeEEcCc
Q psy8840 2 YKYMIIGSKESAESKGVIPNSFDQIFSHIARTE--NKQYLIRASYLEIYQEEIRDLLDKDQSKRYELRENPDSGVYVKNL 79 (355)
Q Consensus 2 KTyTm~G~~~~~~~~GIipra~~~lF~~i~~~~--~~~~~v~vS~~EIyne~v~DLL~~~~~~~l~i~e~~~~~~~v~~l 79 (355)
|||||+|+.. ++.+|||||++++||..+.... +..|.|+|||+|||||+|+|||++.....+.+++++.+|++|.||
T Consensus 103 KTyTm~G~~~-~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~~~~~l~ire~~~~g~~v~gl 181 (366)
T 2zfi_A 103 KSYTMMGKQE-KDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLNPKNKGNLRVREHPLLGPYVEDL 181 (366)
T ss_dssp HHHHHTBCSG-GGCBCHHHHHHHHHHHHHHTCCCTTEEEEEEEEEEEEETTEEEETTCTTTCSCBCEEEETTTEEEETTC
T ss_pred CceEeeCCCc-cCCCccHHHHHHHHHHHHhhcccCCeeEEEEEEEEEeeCCeEEEccccccCCCceEEEcCCCCEEEeCC
Confidence 8999999754 3467999999999999998754 578999999999999999999998766789999999999999999
Q ss_pred eEEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCccccCCCcc
Q psy8840 80 QSYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSERQSKTGAT 159 (355)
Q Consensus 80 ~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~t~~~ 159 (355)
+++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|++..............|+|+|||||||||..++++.
T Consensus 182 ~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~ 261 (366)
T 2zfi_A 182 SKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDAETNITTEKVSKISLVDLAGSERADSTGAK 261 (366)
T ss_dssp CCEECCSHHHHHHHHHHHHHHHTSGGGGTTTHHHHSEEEEEEEEEEEEECTTTTCEEEEEEEEEEEECCCGGGC------
T ss_pred EEEEECCHHHHHHHHHHHhhccccccccCCCCCCcceEEEEEEEEEecccCCCCccceeEeEEEEEeCCCCccccccCCC
Confidence 99999999999999999999999999999999999999999999987665444434567899999999999999999999
Q ss_pred ccchHHHHhhhhhhHHHHHHHHHHhCC-----------CCCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHH
Q psy8840 160 GKRLKEASKINLSLSALGNVISALVDG-----------KNIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEES 228 (355)
Q Consensus 160 g~~~~E~~~IN~SL~~L~~vI~aL~~~-----------~~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eT 228 (355)
|.|++|+.+||+||++||+||.+|+++ +..|||||||||||||||+|||||+|+|||||||+..+++||
T Consensus 262 g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ET 341 (366)
T 2zfi_A 262 GTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDET 341 (366)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHC--------------CCGGGSHHHHHTGGGSSTTCEEEEEEEECCBGGGHHHH
T ss_pred ccchhhhhhHhHHHHHHHHHHHHHHhcccccccccccccCCcccccccHHHHHHHHHhCCCceEEEEEEeCCCcccHHHH
Confidence 999999999999999999999999863 346999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCccccccCC
Q psy8840 229 LTTLRYANRAKNIKNQPRVNE 249 (355)
Q Consensus 229 lsTL~fa~rak~I~n~~~~n~ 249 (355)
++||+||+|||+|+|+|.++.
T Consensus 342 lsTLrfA~rak~I~~~~~~~~ 362 (366)
T 2zfi_A 342 LSTLRYADRAKQIRNTVSVNH 362 (366)
T ss_dssp HHHHHHHHHTC----------
T ss_pred HHHHHHHHHHhhccCCCCCCC
Confidence 999999999999999999875
No 10
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=100.00 E-value=4.1e-72 Score=544.91 Aligned_cols=245 Identities=47% Similarity=0.744 Sum_probs=207.8
Q ss_pred eEEeecCCCCCC--------CCCCchHHHHHHHHHHhhhcCCceEEEEEEEEEEEcchhccccCCcc--cccccceecCC
Q psy8840 2 YKYMIIGSKESA--------ESKGVIPNSFDQIFSHIARTENKQYLIRASYLEIYQEEIRDLLDKDQ--SKRYELRENPD 71 (355)
Q Consensus 2 KTyTm~G~~~~~--------~~~GIipra~~~lF~~i~~~~~~~~~v~vS~~EIyne~v~DLL~~~~--~~~l~i~e~~~ 71 (355)
|||||+|+.... ..+|||||++++||..+.. .+..|.|+|||+|||||+|+|||++.. ..++.+++++.
T Consensus 102 KTyTM~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~-~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~l~i~~~~~ 180 (359)
T 1x88_A 102 KTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTD-NGTEFSVKVSLLEIYNEELFDLLNPSSDVSERLQMFDDPR 180 (359)
T ss_dssp HHHHHTBCCCGGGCSCGGGCTTBCHHHHHHHHHHHHTSS-SSEEEEEEEEEEEEETTEEEETTCTTSCTTCCBEEEEETT
T ss_pred CceEEeccCCccccccccccccCCchHHHHHHHHHHHhc-cCceEEEEEEEEEEeCceeeehhcccccccccceEEeccC
Confidence 899999986421 2479999999999999876 468999999999999999999998763 25789999985
Q ss_pred --CCeEEcCceEEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCC
Q psy8840 72 --SGVYVKNLQSYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAG 149 (355)
Q Consensus 72 --~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAG 149 (355)
++++|.||+++.|.|++|++.+|..|..+|++++|.||..|||||+||+|+|++.....++. ..+..|+|+||||||
T Consensus 181 ~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~~~~~-~~~~~skL~lVDLAG 259 (359)
T 1x88_A 181 NKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTIDGE-ELVKIGKLNLVDLAG 259 (359)
T ss_dssp EEEEEEEETCCCEEECSGGGHHHHHHHHHHHHHHHHHHSTTHHHHCEEEEEEEEEEEEECTTSC-EEEEEEEEEEEECCC
T ss_pred CCCCEEEcCCEEEEcCCHHHHHHHHHHHHhhcccccccCCCCCCCccEEEEEEEEEecccCCCC-ceEEEEEEEEEcCCC
Confidence 68999999999999999999999999999999999999999999999999998765543333 456789999999999
Q ss_pred CccccCCCccccchHHHHhhhhhhHHHHHHHHHHhCCCCCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHH
Q psy8840 150 SERQSKTGATGKRLKEASKINLSLSALGNVISALVDGKNIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESL 229 (355)
Q Consensus 150 sEr~~~t~~~g~~~~E~~~IN~SL~~L~~vI~aL~~~~~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTl 229 (355)
|||.+++++.|.+++|+.+||+||++||+||.+|+++. .|||||||||||||||+|||||+|+|||||||+..+++||+
T Consensus 260 SEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~-~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETl 338 (359)
T 1x88_A 260 SENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERT-PHVPYRESKLTRILQDSLGGRTRTSIIATISPASLNLEETL 338 (359)
T ss_dssp CCC---------------CCCHHHHHHHHHHHHHHTTC-SCCCGGGSHHHHHTGGGSSSSSEEEEEEEECCCGGGHHHHH
T ss_pred CCcccccCCcccchHHHhhhhHHHHHHHHHHHHHhcCC-CCCccccchHHHHHHHHhCCCCeEEEEEEECCCcccHHHHH
Confidence 99999999999999999999999999999999999864 59999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCccccccCC
Q psy8840 230 TTLRYANRAKNIKNQPRVNE 249 (355)
Q Consensus 230 sTL~fa~rak~I~n~~~~n~ 249 (355)
+||+||+|||+|+|+|.+|+
T Consensus 339 ~TLrfA~rak~I~n~p~vn~ 358 (359)
T 1x88_A 339 STLEYAHRAKNILNKPEVNQ 358 (359)
T ss_dssp HHHHHHHHHTTCCCCCC---
T ss_pred HHHHHHHHHhhccCcceeCC
Confidence 99999999999999999996
No 11
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}
Probab=100.00 E-value=7.8e-72 Score=545.09 Aligned_cols=247 Identities=41% Similarity=0.685 Sum_probs=208.3
Q ss_pred eEEeecCCCC--------CCCCCCchHHHHHHHHHHhhhcCCceEEEEEEEEEEEcchhccccCCcccccccceecC--C
Q psy8840 2 YKYMIIGSKE--------SAESKGVIPNSFDQIFSHIARTENKQYLIRASYLEIYQEEIRDLLDKDQSKRYELRENP--D 71 (355)
Q Consensus 2 KTyTm~G~~~--------~~~~~GIipra~~~lF~~i~~~~~~~~~v~vS~~EIyne~v~DLL~~~~~~~l~i~e~~--~ 71 (355)
|||||+|+.. ++..+|||||++++||..+... +..|.|+|||+|||||+|+|||++.....+.+++++ .
T Consensus 114 KTyTm~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~~-~~~~~v~vS~~EIYnE~i~DLL~~~~~~~l~i~~~~~~~ 192 (373)
T 2wbe_C 114 KTHTMVGNETAELKSSWEDDSDIGIIPRALSHLFDELRMM-EVEYTMRISYLELYNEELCDLLSTDDTTKIRIFDDSTKK 192 (373)
T ss_dssp HHHHHTBSCSCCSSSCSSCTTTBCHHHHHHHHHHHHHHHC-CSCEEEEEEEEEEETTEEEESSCTTSCSCCCEEECSSSS
T ss_pred cceecccCccccccccccccCCCcChHHHHHHHHHHHHhc-CceEEEEEEEEEEeCCeEEECCCCCCCCCceeEeccCCC
Confidence 8999999764 2457899999999999999765 578999999999999999999998766778888885 5
Q ss_pred CCeEEcCceEEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCc
Q psy8840 72 SGVYVKNLQSYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSE 151 (355)
Q Consensus 72 ~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsE 151 (355)
++++|.||+++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|++.....++. .....|+|+||||||||
T Consensus 193 g~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~-~~~~~skL~lVDLAGSE 271 (373)
T 2wbe_C 193 GSVIIQGLEEIPVHSKDDVYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRENGIEGE-DMLKIGKLNLVDLAGSE 271 (373)
T ss_dssp SCEEETTCCCEEESSHHHHHHHHHHHHHHHTTTCSCHHHHHHHSEEEEEEEEEECTTCTTTC-CEEEEEEEEEEECCCC-
T ss_pred CcEEecCceEEccCCHHHHHHHHHHHhhhhccccccCCCCCCCccEEEEEEEEEecCCCCCC-cceeEEEEEEEECCCCC
Confidence 68999999999999999999999999999999999999999999999999998765433332 45678999999999999
Q ss_pred cccCCCcc-ccchHHHHhhhhhhHHHHHHHHHHhCCCCCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHHH
Q psy8840 152 RQSKTGAT-GKRLKEASKINLSLSALGNVISALVDGKNIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESLT 230 (355)
Q Consensus 152 r~~~t~~~-g~~~~E~~~IN~SL~~L~~vI~aL~~~~~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTls 230 (355)
|..++++. |.|++|+.+||+||++||+||.+|+++. .|||||||||||||||+|||||+|+|||||||+..+++||++
T Consensus 272 r~~~t~~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~-~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETls 350 (373)
T 2wbe_C 272 NVSKAGNEKGIRVRETVNINQSLLTLGRVITALVDRA-PHVPYRESKLTRLLQESLGGRTKTSIIATISPGHKDIEETLS 350 (373)
T ss_dssp -------------------CHHHHHHHHHHHHHHHCS-SCCCGGGCHHHHHTHHHHHSSSEEEEEEEECCBGGGHHHHHH
T ss_pred ccccccCccccchhHHHHHHHHHHHHHHHHHHHHcCC-CcCccccchHHHHHHHHhCCCceEEEEEEeCCCcccHHHHHH
Confidence 99999987 9999999999999999999999999865 599999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCccccccCCCc
Q psy8840 231 TLRYANRAKNIKNQPRVNEDP 251 (355)
Q Consensus 231 TL~fa~rak~I~n~~~~n~~~ 251 (355)
||+||+|||+|+|+|.+|++.
T Consensus 351 TLrfA~rak~I~n~p~vN~~~ 371 (373)
T 2wbe_C 351 TLEYAHRAKNIQNKPEVNQKL 371 (373)
T ss_dssp HHHHHHHHHTCEECCCCCEEC
T ss_pred HHHHHHHHhhccccceecccc
Confidence 999999999999999999753
No 12
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A*
Probab=100.00 E-value=2.2e-71 Score=533.08 Aligned_cols=234 Identities=47% Similarity=0.687 Sum_probs=220.9
Q ss_pred eEEeecCCCCCCCCCCchHHHHHHHHHHhhhc-CCceEEEEEEEEEEEcchhccccCCcccccccceecCCCCeEEcCce
Q psy8840 2 YKYMIIGSKESAESKGVIPNSFDQIFSHIART-ENKQYLIRASYLEIYQEEIRDLLDKDQSKRYELRENPDSGVYVKNLQ 80 (355)
Q Consensus 2 KTyTm~G~~~~~~~~GIipra~~~lF~~i~~~-~~~~~~v~vS~~EIyne~v~DLL~~~~~~~l~i~e~~~~~~~v~~l~ 80 (355)
|||||+|+..+++..|||||++++||..+... ++..|.|++||+|||||+|+|||++. ...+.++++++++++|.|++
T Consensus 91 KTyTm~G~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~-~~~l~i~e~~~~~~~v~gl~ 169 (325)
T 1bg2_A 91 KTHTMEGKLHDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVS-KTNLSVHEDKNRVPYVKGCT 169 (325)
T ss_dssp HHHHHTBSTTCTTTBCHHHHHHHHHHHHHHHHCSSEEEEEEEEEEEEETTEEEESSCTT-CCSBCEEECTTSCEEETTCC
T ss_pred CceEecccCCCcccCccHHHHHHHHHHHHHhccCCceEEEEEEEEEEecCeeeecccCC-CCCceEEECCCCCEEecCce
Confidence 89999999888889999999999999999764 47899999999999999999999875 56799999999999999999
Q ss_pred EEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCccccCCCccc
Q psy8840 81 SYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSERQSKTGATG 160 (355)
Q Consensus 81 ~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~t~~~g 160 (355)
++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|++..... .....|+|+|||||||||.+++++.|
T Consensus 170 ~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~----~~~~~skl~lVDLAGSEr~~~t~~~g 245 (325)
T 1bg2_A 170 ERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQENTQT----EQKLSGKLYLVDLAGSEKVSKTGAEG 245 (325)
T ss_dssp CEEECSHHHHHHHHHHHHHHTTTTCSCHHHHHHHSEEEEEEEEEEEETTT----CCEEEEEEEEEECCCSCCCCCCSSSC
T ss_pred EEeCCCHHHHHHHHHHHHhhCceeecCCCCCCCCCeEEEEEEEEEEecCC----CcEEEEEEEEEECCCCCcccccCCcc
Confidence 99999999999999999999999999999999999999999998865432 34578999999999999999999999
Q ss_pred cchHHHHhhhhhhHHHHHHHHHHhCCCCCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHHHHHHHHHHhcc
Q psy8840 161 KRLKEASKINLSLSALGNVISALVDGKNIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESLTTLRYANRAKN 240 (355)
Q Consensus 161 ~~~~E~~~IN~SL~~L~~vI~aL~~~~~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTlsTL~fa~rak~ 240 (355)
.+++|+.+||+||++||+||.+|++++ .|||||||||||||||+|||||+|+|||||||+..+++||++||+||+|||+
T Consensus 246 ~rl~E~~~IN~SL~aLg~vI~aL~~~~-~hvPyRdSkLT~lLqdsLgGns~t~mia~vsP~~~~~~ETl~TL~fa~rak~ 324 (325)
T 1bg2_A 246 AVLDEAKNINKSLSALGNVISALAEGS-TYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQRAKT 324 (325)
T ss_dssp TTSCCCCCCCHHHHHHHHHHHHHHTTC-SCCCGGGSHHHHHGGGTSSSSCEEEEEEEECCBGGGHHHHHHHHHHHHTSCC
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHcCC-CCCcccccHHHHHHHHHhCCCCcEEEEEEECCccccHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999875 5999999999999999999999999999999999999999999999999998
Q ss_pred C
Q psy8840 241 I 241 (355)
Q Consensus 241 I 241 (355)
|
T Consensus 325 I 325 (325)
T 1bg2_A 325 I 325 (325)
T ss_dssp C
T ss_pred C
Confidence 7
No 13
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=100.00 E-value=9.4e-71 Score=534.57 Aligned_cols=234 Identities=47% Similarity=0.697 Sum_probs=191.2
Q ss_pred eEEeecCCCCCCCCCCchHHHHHHHHHHhhhcC-CceEEEEEEEEEEEcchhccccCCcccccccceecCCCCeEEcCce
Q psy8840 2 YKYMIIGSKESAESKGVIPNSFDQIFSHIARTE-NKQYLIRASYLEIYQEEIRDLLDKDQSKRYELRENPDSGVYVKNLQ 80 (355)
Q Consensus 2 KTyTm~G~~~~~~~~GIipra~~~lF~~i~~~~-~~~~~v~vS~~EIyne~v~DLL~~~~~~~l~i~e~~~~~~~v~~l~ 80 (355)
|||||+|++.++ |||||++++||..++... ...|.|+|||+|||||+|+|||.+ ..++.+++|+.++++|.||+
T Consensus 119 KTyTm~G~~~~~---Giipr~~~~lf~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~--~~~l~ire~~~~~~~v~gl~ 193 (355)
T 3lre_A 119 KTHTMLGSADEP---GVMYLTMLHLYKCMDEIKEEKICSTAVSYLEVYNEQIRDLLVN--SGPLAVREDTQKGVVVHGLT 193 (355)
T ss_dssp HHHHHTBCSSSB---CHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEEETTEEEESSSC--CCCBEEEECTTSCEEEETCC
T ss_pred ceeeeccCCCCC---CeeehhhhHHHHhhhhhccCceEEEEEEEEEEECCEEEECcCC--CCCceeEEcCCCCEEeeeee
Confidence 899999987655 999999999999998754 678999999999999999999987 46799999999999999999
Q ss_pred EEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCccccCCCccc
Q psy8840 81 SYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSERQSKTGATG 160 (355)
Q Consensus 81 ~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~t~~~g 160 (355)
++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|++.+...... ..+..|+|+|||||||||..++++.|
T Consensus 194 ~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~-~~~~~skl~lVDLAGSEr~~~t~~~g 272 (355)
T 3lre_A 194 LHQPKSSEEILHLLDNGNKNRTQHPTDMNATSSRSHAVFQIYLRQQDKTASIN-QNVRIAKMSLIDLAGSERASTSGAKG 272 (355)
T ss_dssp CBCCCSHHHHHHHHHHHHHTSCBC-----CBCTTCEEEEEEEEEEEETTSCTT-CCCCCEEEEEEECCCCCC--------
T ss_pred EEecCCHHHHHHHHHHHHhcCCcccccCcCCCCCCcEEEEEEEEEecCCCCCC-CCEEEEEEEEEECCCCCcCcCCCCcc
Confidence 99999999999999999999999999999999999999999999876544332 34678999999999999999999999
Q ss_pred cchHHHHhhhhhhHHHHHHHHHHhCCC--CCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHHHHHHHHHHh
Q psy8840 161 KRLKEASKINLSLSALGNVISALVDGK--NIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESLTTLRYANRA 238 (355)
Q Consensus 161 ~~~~E~~~IN~SL~~L~~vI~aL~~~~--~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTlsTL~fa~ra 238 (355)
.|++|+.+||+||++||+||.||++++ ..|||||||||||||||+|||||+|+|||||||+..+++||++||+||+||
T Consensus 273 ~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lL~dsLgGnskt~mIa~isP~~~~~~ETl~TL~fA~ra 352 (355)
T 3lre_A 273 TRFVEGTNINRSLLALGNVINALADSKRKNQHIPYRNSKLTRLLKDSLGGNCQTIMIAAVSPSSVFYDDTYNTLKYANRA 352 (355)
T ss_dssp ---------CHHHHHHHHHHHHHC--------CCGGGSHHHHHTTTTSSTTSEEEEEEEECCBGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCCcccCHHHHHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHh
Confidence 999999999999999999999999854 369999999999999999999999999999999999999999999999999
Q ss_pred ccC
Q psy8840 239 KNI 241 (355)
Q Consensus 239 k~I 241 (355)
|+|
T Consensus 353 k~I 355 (355)
T 3lre_A 353 KDI 355 (355)
T ss_dssp C--
T ss_pred ccC
Confidence 986
No 14
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9
Probab=100.00 E-value=1.5e-70 Score=532.91 Aligned_cols=237 Identities=51% Similarity=0.767 Sum_probs=192.7
Q ss_pred eEEeecCCCCCCCCCCchHHHHHHHHHHhhhc--CCceEEEEEEEEEEEcchhccccCCcc-cccccceecCCCCeEEcC
Q psy8840 2 YKYMIIGSKESAESKGVIPNSFDQIFSHIART--ENKQYLIRASYLEIYQEEIRDLLDKDQ-SKRYELRENPDSGVYVKN 78 (355)
Q Consensus 2 KTyTm~G~~~~~~~~GIipra~~~lF~~i~~~--~~~~~~v~vS~~EIyne~v~DLL~~~~-~~~l~i~e~~~~~~~v~~ 78 (355)
|||||+|+.+.+ |||||++++||..+... .+..|.|+|||+|||||+|+|||++.. ...+.+++++.+|++|.|
T Consensus 106 KTyTm~G~~~~~---Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~e~~~~g~~v~g 182 (354)
T 3gbj_A 106 KSYTMMGTADQP---GLIPRLCSGLFERTQKEENEEQSFKVEVSYMEIYNEKVRDLLDPKGSRQTLKVREHSVLGPYVDG 182 (354)
T ss_dssp HHHHHTBCSSSB---CHHHHHHHHHHHHHHHHCBTTEEEEEEEEEEEEETTEEEETTC------CBCBC------CCBTT
T ss_pred CceEEecCCCCC---chhhHHHHHHHHHHHhhcccccceeeeceeEEEecCeeeEccCCCCCCcceEEEEcCCCCEEEEe
Confidence 899999986655 99999999999998754 367899999999999999999998753 467999999999999999
Q ss_pred ceEEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCccccCCCc
Q psy8840 79 LQSYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSERQSKTGA 158 (355)
Q Consensus 79 l~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~t~~ 158 (355)
|+++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+...+..........|+|+|||||||||..++++
T Consensus 183 l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~ 262 (354)
T 3gbj_A 183 LSKLAVTSYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFKITLTHTLYDVKSGTSGEKVGKLSLVDLAGSERATKTGA 262 (354)
T ss_dssp CCCEEECSHHHHHHHHHHHHHCC----------CTTSEEEEEEEEEEEEECTTSCEEEEEEEEEEEEECCCCCCCCCCC-
T ss_pred eEEEecCCHHHHHHHHHHHHhcCCeeecCCCCCCCcccEEEEEEEEEEecccCCCCCCeeEEEEEEEECCCCCchhhcCC
Confidence 99999999999999999999999999999999999999999999988755444444556889999999999999999999
Q ss_pred cccchHHHHhhhhhhHHHHHHHHHHhCC-----CCCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHHHHHH
Q psy8840 159 TGKRLKEASKINLSLSALGNVISALVDG-----KNIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESLTTLR 233 (355)
Q Consensus 159 ~g~~~~E~~~IN~SL~~L~~vI~aL~~~-----~~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTlsTL~ 233 (355)
.|.|++|+.+||+||++||+||.+|++. +..|||||||||||||||+|||||+|+|||||||+..+++||++||+
T Consensus 263 ~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETlsTLr 342 (354)
T 3gbj_A 263 AGDRLKEGSNINKSLTTLGLVISALADQSAGKNKNKFVPYRDSVLTWLLKDSLGGNSKTAMVATVSPAADNYDETLSTLR 342 (354)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHC------CCCCCGGGSHHHHHTHHHHSTTCEEEEEEEECCBGGGHHHHHHHHH
T ss_pred ccccchhHHHhhHHHHHHHHHHHHHHhhhcccCCCCcccccccHHHHHHHHHhCCCCeEEEEEEeCCCcchHHHHHHHHH
Confidence 9999999999999999999999999862 45699999999999999999999999999999999999999999999
Q ss_pred HHHHhccC
Q psy8840 234 YANRAKNI 241 (355)
Q Consensus 234 fa~rak~I 241 (355)
||.||+.-
T Consensus 343 ~a~~~~~~ 350 (354)
T 3gbj_A 343 YADRAKHH 350 (354)
T ss_dssp HHHHHC--
T ss_pred HHHHhhhc
Confidence 99999863
No 15
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens}
Probab=100.00 E-value=5.9e-70 Score=524.23 Aligned_cols=233 Identities=45% Similarity=0.696 Sum_probs=207.3
Q ss_pred eEEeecCCCCCCCCCCchHHHHHHHHHHhhhcC-CceEEEEEEEEEEEcchhccccCCcccccccce--ecCCCCeEEcC
Q psy8840 2 YKYMIIGSKESAESKGVIPNSFDQIFSHIARTE-NKQYLIRASYLEIYQEEIRDLLDKDQSKRYELR--ENPDSGVYVKN 78 (355)
Q Consensus 2 KTyTm~G~~~~~~~~GIipra~~~lF~~i~~~~-~~~~~v~vS~~EIyne~v~DLL~~~~~~~l~i~--e~~~~~~~v~~ 78 (355)
|||||+|+..++ |||||++++||..++... +..|.|+|||+|||||+|+|||++.+..++.++ +|+.++++|.|
T Consensus 94 KTyTm~G~~~~~---Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~l~i~~~~~~~~~~~v~g 170 (330)
T 2h58_A 94 KTYTMEGTAENP---GINQRALQLLFSEVQEKASDWEYTITVSAAEIYNEVLRDLLGKEPQEKLEIRLCPDGSGQLYVPG 170 (330)
T ss_dssp HHHHHTBCSSSB---CHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSCSSCCCCCCEECTTSSCCEECTT
T ss_pred CcEEEecCCCCC---cHHHHHHHHHHHhhhcccCCceEEEEEEEEEEECCChhhcccccccccceEEEeecCCCCEecCC
Confidence 899999986554 999999999999998754 679999999999999999999987655556665 57788999999
Q ss_pred ceEEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCccccCCCc
Q psy8840 79 LQSYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSERQSKTGA 158 (355)
Q Consensus 79 l~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~t~~ 158 (355)
++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|++.+.. .+....|+|+|||||||||..++++
T Consensus 171 l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~----~~~~~~skL~lVDLAGSEr~~~t~~ 246 (330)
T 2h58_A 171 LTEFQVQSVDDINKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVDCS----TGLRTTGKLNLVDLAGSERVGKSGA 246 (330)
T ss_dssp CCCEEECSHHHHHHHHHHHHHHTTCTTCCSCSCGGGSEEEEEEEEEEEETT----TTEEEEEEEEEEECCCCCCCC----
T ss_pred CEEEEeCCHHHHHHHHHHHHhhCCcccccCCCCcCCccEEEEEEEEEEecC----CCcEEEEEEEEEeCCCCCcccccCC
Confidence 999999999999999999999999999999999999999999999876542 2356789999999999999999999
Q ss_pred cccchHHHHhhhhhhHHHHHHHHHHhCCCCCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHHHHHHHHHHh
Q psy8840 159 TGKRLKEASKINLSLSALGNVISALVDGKNIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESLTTLRYANRA 238 (355)
Q Consensus 159 ~g~~~~E~~~IN~SL~~L~~vI~aL~~~~~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTlsTL~fa~ra 238 (355)
.|.+++|+.+||+||++||+||.+|++++ .|||||||||||||||+|||||+|+|||||||+..+++||++||+||+||
T Consensus 247 ~g~r~~E~~~IN~SL~aLg~vI~aL~~~~-~hvPyRdSkLT~lL~dsLgGns~t~mI~~isP~~~~~~ETl~TL~fA~ra 325 (330)
T 2h58_A 247 EGSRLREAQHINKSLSALGDVIAALRSRQ-GHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLKFAERV 325 (330)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHTTC-SCCCGGGSHHHHHTHHHHSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHhhHhHHHHHHHHHHHhcCC-CCCcccccHHHHHHHHHhCCCceEEEEEEeCCccccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999865 59999999999999999999999999999999999999999999999999
Q ss_pred ccCc
Q psy8840 239 KNIK 242 (355)
Q Consensus 239 k~I~ 242 (355)
|+|+
T Consensus 326 k~i~ 329 (330)
T 2h58_A 326 RSVE 329 (330)
T ss_dssp C---
T ss_pred hhCc
Confidence 9986
No 16
>2nr8_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural genomics consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} PDB: 3nwn_A*
Probab=100.00 E-value=8.4e-71 Score=534.78 Aligned_cols=237 Identities=39% Similarity=0.610 Sum_probs=198.7
Q ss_pred eEEeecCCCCCCCCCCchHHHHHHHHHHhhhcCCceEEEEEEEEEEEcchhccccCCc-----ccccccceecCCCCeEE
Q psy8840 2 YKYMIIGSKESAESKGVIPNSFDQIFSHIARTENKQYLIRASYLEIYQEEIRDLLDKD-----QSKRYELRENPDSGVYV 76 (355)
Q Consensus 2 KTyTm~G~~~~~~~~GIipra~~~lF~~i~~~~~~~~~v~vS~~EIyne~v~DLL~~~-----~~~~l~i~e~~~~~~~v 76 (355)
|||||+|+..++..+|||||++++||..++..++..|.|+|||+|||||+|+|||++. ...++.+++++ .|++|
T Consensus 117 KTyTM~G~~~~~~~~Giipra~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~l~i~e~~-~g~~v 195 (358)
T 2nr8_A 117 KTYTMMGATENYKHRGILPRALQQVFRMIEERPTHAITVRVSYLEIYNESLFDLLSTLPYVGPSVTPMTIVENP-QGVFI 195 (358)
T ss_dssp HHHHHTBCSSCGGGBCHHHHHHHHHHHHHHTCTTSCEEEEEEEEEEETTEEEETTSSSTTSCTTTSCCEEEEET-TEEEE
T ss_pred CceEecccccccccCCcHHHHHHHHHHHHhhcCCceEEEEEEEEEEeCCeeeECcCCccccCccCCceEEEECC-CceEe
Confidence 8999999987767789999999999999999888999999999999999999999874 23578899998 78999
Q ss_pred cCceEEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCccccCC
Q psy8840 77 KNLQSYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSERQSKT 156 (355)
Q Consensus 77 ~~l~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~t 156 (355)
.|++++.|.+++|++.+|..|.++|++++|.||..|||||+||+|+|++....... .....|+|+|||||||||..++
T Consensus 196 ~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~--~~~~~skL~lVDLAGSEr~~~t 273 (358)
T 2nr8_A 196 KGLSVHLTSQEEDAFSLLFEGETNRIIASHTMNKNSSRSHCIFTIYLEAHSRTLSE--EKYITSKINLVDLAGSERLGKS 273 (358)
T ss_dssp ETCCCEECSSHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEEEEEC---------CCEEEEEEEEECCCCC-----
T ss_pred cCCEEEEcCCHHHHHHHHHHHHhccccccccCCCCCCcCeEEEEEEEEEEeccCCC--CCEEEEEEEEEECCCCCccccc
Confidence 99999999999999999999999999999999999999999999999876543322 2356799999999999999999
Q ss_pred CccccchHHHHhhhhhhHHHHHHHHHHhCCCCCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHHHHHHHHH
Q psy8840 157 GATGKRLKEASKINLSLSALGNVISALVDGKNIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESLTTLRYAN 236 (355)
Q Consensus 157 ~~~g~~~~E~~~IN~SL~~L~~vI~aL~~~~~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTlsTL~fa~ 236 (355)
++.|.+++|+.+||+||++||+||.||++++..||||||||||+||||+|||||+|+|||||||+..+++||++||+||+
T Consensus 274 ~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hiPyRdSkLT~LLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~ 353 (358)
T 2nr8_A 274 GSEGQVLKEATYINKSLSFLEQAIIALGDQKRDHIPFRQCKLTHALKDSLGGNCNMVLVTNIYGEAAQLEETLSSLRFAS 353 (358)
T ss_dssp -----------CCSTHHHHHHHHHHHHHC-----CCGGGSHHHHHTHHHHSSSSEEEEEEEECCSGGGHHHHHHHHHHHT
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCccCHHHHHHHHhcCCCCeEEEEEEeCCchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999998877899999999999999999999999999999999999999999999999
Q ss_pred HhccC
Q psy8840 237 RAKNI 241 (355)
Q Consensus 237 rak~I 241 (355)
|||.|
T Consensus 354 Rak~I 358 (358)
T 2nr8_A 354 RMKLV 358 (358)
T ss_dssp TGGGC
T ss_pred HhccC
Confidence 99986
No 17
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*
Probab=100.00 E-value=6.5e-70 Score=527.21 Aligned_cols=238 Identities=43% Similarity=0.682 Sum_probs=194.7
Q ss_pred eEEeecCCCCC---CCCCCchHHHHHHHHHHhhhcCCceEEEEEEEEEEEcchhccccCCc-ccccccceecCCCCeEEc
Q psy8840 2 YKYMIIGSKES---AESKGVIPNSFDQIFSHIARTENKQYLIRASYLEIYQEEIRDLLDKD-QSKRYELRENPDSGVYVK 77 (355)
Q Consensus 2 KTyTm~G~~~~---~~~~GIipra~~~lF~~i~~~~~~~~~v~vS~~EIyne~v~DLL~~~-~~~~l~i~e~~~~~~~v~ 77 (355)
|||||+|+... ++++|||||++++||..++..+...|.|+|||+|||||+|+|||++. ..+.+.+++|+.++++|.
T Consensus 97 KTyTm~G~~~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~e~~~~~~~v~ 176 (344)
T 4a14_A 97 KTYTMGEASVASLLEDEQGIVPRAMAEAFKLIDENDLLDCLVHVSYLEVYKEEFRDLLEVGTASRDIQLREDERGNVVLC 176 (344)
T ss_dssp HHHHHCC--------CCCCHHHHHHHHHHHHHHHCTTSEEEEEEEEEEEETTEEEETTSSCCCGGGCEEEECTTSCEEEE
T ss_pred ceEeecccchhhhhhcccCCchHHHHHHHHhcccccceeeEEEEehhhhhHHHHHHHHHhccccccceeeeccCCCEEEE
Confidence 89999997532 45679999999999999999888999999999999999999999864 356799999999999999
Q ss_pred CceEEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCC----CCCceEEEEEEEeecCCCCccc
Q psy8840 78 NLQSYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVRED----SSMSQVRVGKLNLVDLAGSERQ 153 (355)
Q Consensus 78 ~l~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~----~~~~~~~~s~L~~VDLAGsEr~ 153 (355)
|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|++...... .....+..|+|+|||||||||.
T Consensus 177 gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~ 256 (344)
T 4a14_A 177 GVKEVDVEGLDEVLSLLEMGNAARHTGATHLNHLSSRSHTVFTVTLEQRGRAPSRLPRPAPGQLLVSKFHFVDLAGSERV 256 (344)
T ss_dssp SCCCEECCSHHHHHHHHHHHHHHHHC------CCGGGSEEEEEEEEEEEC------------CEEEEEEEEEECCCCCCC
T ss_pred eeeeccccCHHHHHHHHHhcchhcccCcchhhhcccccceEEEEEeeeCCCCcccCCCccccceeeeeeeEEecccchhh
Confidence 999999999999999999999999999999999999999999999998754321 1224567899999999999999
Q ss_pred cCCCccccchHHHHhhhhhhHHHHHHHHHHhCCC--CCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHHHH
Q psy8840 154 SKTGATGKRLKEASKINLSLSALGNVISALVDGK--NIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESLTT 231 (355)
Q Consensus 154 ~~t~~~g~~~~E~~~IN~SL~~L~~vI~aL~~~~--~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTlsT 231 (355)
.++++.|.+++|+.+||+||++||+||.+|++++ ..|||||||||||||||+|||||+|+|||||||+..+++||++|
T Consensus 257 ~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~vsP~~~~~~ETl~T 336 (344)
T 4a14_A 257 LKTGSTGERLKESIQINSSLLALGNVISALGDPQRRGSHIPYRDSKITRILKDSLGGNAKTVMIACVSPSSSDFDETLNT 336 (344)
T ss_dssp --------------CCCSHHHHHHHHHHHHTCTTTTTSCCCGGGCHHHHHTTTSSSTTSEEEEEEEECCBGGGHHHHHHH
T ss_pred cccCCchhhhhhheeechhHHhhhhHHHhcCCccccCCCCCcchhhHHHHhHhhcCCCcceEEEEEeCCCccchhHHhhh
Confidence 9999999999999999999999999999999753 46999999999999999999999999999999999999999999
Q ss_pred HHHHHHhc
Q psy8840 232 LRYANRAK 239 (355)
Q Consensus 232 L~fa~rak 239 (355)
|+||+|||
T Consensus 337 L~fA~rAk 344 (344)
T 4a14_A 337 LNYASRAQ 344 (344)
T ss_dssp HHHHHHTC
T ss_pred hhhhhhcC
Confidence 99999996
No 18
>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-70 Score=533.72 Aligned_cols=237 Identities=39% Similarity=0.610 Sum_probs=197.3
Q ss_pred eEEeecCCCCCCCCCCchHHHHHHHHHHhhhcCCceEEEEEEEEEEEcchhccccCCcc-----cccccceecCCCCeEE
Q psy8840 2 YKYMIIGSKESAESKGVIPNSFDQIFSHIARTENKQYLIRASYLEIYQEEIRDLLDKDQ-----SKRYELRENPDSGVYV 76 (355)
Q Consensus 2 KTyTm~G~~~~~~~~GIipra~~~lF~~i~~~~~~~~~v~vS~~EIyne~v~DLL~~~~-----~~~l~i~e~~~~~~~v 76 (355)
|||||+|+..+++++|||||++++||..+...++..|.|+|||+|||||+|+|||++.+ ...+.+++++ .|++|
T Consensus 118 KTyTM~G~~~~~~~~Giipra~~~lF~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~~~-~g~~v 196 (359)
T 3nwn_A 118 KTYTMMGATENYKHRGILPRALQQVFRMIEERPTHAITVRVSYLEIYNESLFDLLSTLPYVGPSVTPMTIVENP-QGVFI 196 (359)
T ss_dssp HHHHHTBCSSCGGGBCHHHHHHHHHHHHHHTCTTSCEEEEEEEEEEETTEEEETTSSSTTSCTTTSCCEEEEET-TEEEE
T ss_pred ccEEeCCccCCccchhhHHHHHHHHHHHhhcCCCCcEEEEEEEEEEeccccccccccccccccccccceEEecC-CceEE
Confidence 89999999888888999999999999999998899999999999999999999998642 3446677776 47999
Q ss_pred cCceEEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCccccCC
Q psy8840 77 KNLQSYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSERQSKT 156 (355)
Q Consensus 77 ~~l~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~t 156 (355)
.|++++.|.+++|++.++..|..+|++++|.||..|||||+||+|+|++....... .....|+|+|||||||||..++
T Consensus 197 ~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~~~~--~~~~~skL~lVDLAGSEr~~~t 274 (359)
T 3nwn_A 197 KGLSVHLTSQEEDAFSLLFEGETNRIIASHTMNKNSSRSHCIFTIYLEAHSRTLSE--EKYITSKINLVDLAGSERLGKS 274 (359)
T ss_dssp ETCCCEECSSHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEEEEEC---------CCEEEEEEEEECCCCC-----
T ss_pred eccEEEEecCHHHHHHHHHhhhhhcccccccCccccCcceEEEEEEEEeecccccC--cccccccceeeecccccccccc
Confidence 99999999999999999999999999999999999999999999999876543332 3457899999999999999999
Q ss_pred CccccchHHHHhhhhhhHHHHHHHHHHhCCCCCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHHHHHHHHH
Q psy8840 157 GATGKRLKEASKINLSLSALGNVISALVDGKNIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESLTTLRYAN 236 (355)
Q Consensus 157 ~~~g~~~~E~~~IN~SL~~L~~vI~aL~~~~~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTlsTL~fa~ 236 (355)
++.|.+++|+.+||+||++||+||.||++++..|||||||||||||||+|||||+|+|||||||+..+++||++||+||+
T Consensus 275 ~~~g~rl~E~~~IN~SL~~Lg~vI~aL~~~~~~hVPYRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETlsTL~fA~ 354 (359)
T 3nwn_A 275 GSEGQVLKEATYINKSLSFLEQAIIALGDQKRDHIPFRQCKLTHALKDSLGGNCNMVLVTNIYGEAAQLEETLSSLRFAS 354 (359)
T ss_dssp -----------CCSTHHHHHHHHHHHHHC-----CCGGGSHHHHHTHHHHSSSSEEEEEEEECCSGGGHHHHHHHHHHHT
T ss_pred CCchhHHHhhhhhcccHHHHHHHHHHHHhcCCCcCCcccCHHHHHHHHhcCCCccEEEEEEeCCchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999887899999999999999999999999999999999999999999999999
Q ss_pred HhccC
Q psy8840 237 RAKNI 241 (355)
Q Consensus 237 rak~I 241 (355)
|||+|
T Consensus 355 rak~I 359 (359)
T 3nwn_A 355 RMKLV 359 (359)
T ss_dssp TGGGC
T ss_pred HHcCC
Confidence 99987
No 19
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*
Probab=100.00 E-value=3.6e-69 Score=521.97 Aligned_cols=236 Identities=39% Similarity=0.610 Sum_probs=200.6
Q ss_pred eEEeecCCCCCCCCCCchHHHHHHHHHHhhhcC--CceEEEEEEEEEEEcchhccccCCccc--------ccccceecC-
Q psy8840 2 YKYMIIGSKESAESKGVIPNSFDQIFSHIARTE--NKQYLIRASYLEIYQEEIRDLLDKDQS--------KRYELRENP- 70 (355)
Q Consensus 2 KTyTm~G~~~~~~~~GIipra~~~lF~~i~~~~--~~~~~v~vS~~EIyne~v~DLL~~~~~--------~~l~i~e~~- 70 (355)
|||||+|+. +|||||++++||..++... ...|.|+|||+|||||+|+|||++... .++.+++++
T Consensus 98 KTyTM~G~~-----~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~i~~~~~ 172 (347)
T 1f9v_A 98 KTFTMLNPG-----DGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYNENIVDLLRSDNNNKEDTSIGLKHEIRHDQE 172 (347)
T ss_dssp HHHHHHSTT-----TSHHHHHHHHHHHHHHHHGGGTCEEEEEEEEEEEETTEEEETTC-------------CCCEEEETT
T ss_pred CcEeccCCC-----CCchHHHHHHHHHHHHhhhhcCCceEEEEEEEEEECCeeeeccCCccccccccccCCceeEEEecC
Confidence 899999953 4999999999999998643 679999999999999999999987532 357788764
Q ss_pred CCCeEEcCceEEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCC
Q psy8840 71 DSGVYVKNLQSYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGS 150 (355)
Q Consensus 71 ~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGs 150 (355)
.++++|.|++++.|.+++|++.+|..|.++|++++|.||..|||||+||+|+|.+.+... +....|+|+|||||||
T Consensus 173 ~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~----~~~~~skL~lVDLAGS 248 (347)
T 1f9v_A 173 TKTTTITNVTSCKLESEEMVEIILKKANKLRSTASTASNEHSSASHSIFIIHLSGSNAKT----GAHSYGTLNLVDLAGS 248 (347)
T ss_dssp TTEEEETTCCCEECSSGGGHHHHHHHHC-----------CCGGGSEEEEEEEEEEECC------CCEEEEEEEEEECCCC
T ss_pred CCceEecCCEEEEcCCHHHHHHHHHHHHhccceeeccCCCCCCCceEEEEEEEEEecCCC----CceeeeEEEEEECCCC
Confidence 578999999999999999999999999999999999999999999999999998765432 3457899999999999
Q ss_pred ccccCCCccccchHHHHhhhhhhHHHHHHHHHHhCCC--CCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHH
Q psy8840 151 ERQSKTGATGKRLKEASKINLSLSALGNVISALVDGK--NIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEES 228 (355)
Q Consensus 151 Er~~~t~~~g~~~~E~~~IN~SL~~L~~vI~aL~~~~--~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eT 228 (355)
||..++++.|.|++|+.+||+||++||+||.+|++++ ..|||||||||||||||+|||||+|+|||||||+..+++||
T Consensus 249 Er~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lLqdsLgGnskt~mI~~vsP~~~~~~ET 328 (347)
T 1f9v_A 249 ERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINET 328 (347)
T ss_dssp CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHTSCC---CCCCGGGSHHHHHHHHHHSTTCEEEEEEEECCSGGGHHHH
T ss_pred ccccccccchhhhHHHHHHhHHHHHHHHHHHHHhcccCCCCcCccccCHHHHHHHHHhCCCccEEEEEEeCCccccHHHH
Confidence 9999999999999999999999999999999999865 36999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCccccc
Q psy8840 229 LTTLRYANRAKNIKNQPR 246 (355)
Q Consensus 229 lsTL~fa~rak~I~n~~~ 246 (355)
++||+||+||++|+..++
T Consensus 329 l~TLrfA~r~~~i~~~~r 346 (347)
T 1f9v_A 329 LNSLRFASKVNSTRLVSR 346 (347)
T ss_dssp HHHHHHHHHHCCTTTC--
T ss_pred HHHHHHHHHHhhhccCCC
Confidence 999999999999998875
No 20
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5e-69 Score=525.07 Aligned_cols=235 Identities=39% Similarity=0.555 Sum_probs=187.7
Q ss_pred eEEeecCCCC-CCCCCCchHHHHHHHHHHhhhcC--CceEEEEEEEEEEEcchhccccCCc----ccccccceec--CCC
Q psy8840 2 YKYMIIGSKE-SAESKGVIPNSFDQIFSHIARTE--NKQYLIRASYLEIYQEEIRDLLDKD----QSKRYELREN--PDS 72 (355)
Q Consensus 2 KTyTm~G~~~-~~~~~GIipra~~~lF~~i~~~~--~~~~~v~vS~~EIyne~v~DLL~~~----~~~~l~i~e~--~~~ 72 (355)
|||||+|+.. +++.+|||||++++||..++... +..|.|++||+|||||+|+|||++. ....+.++++ +.+
T Consensus 129 KTyTM~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~l~ir~~~~~~~ 208 (376)
T 2rep_A 129 KTFTMEGGPGGDPQLEGLIPRALRHLFSVAQELSGQGWTYSFVASYVEIYNETVRDLLATGTRKGQGGECEIRRAGPGSE 208 (376)
T ss_dssp HHHHHTBCSSCCGGGBCHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEEEETTEEEETTCCC--------CCEEEC---CC
T ss_pred CceEeecCCCCCcccCCcHHHHHHHHHHHHHHhhcCCeEEEEEEEEEEEECCEeeEccccccccccCCCceEEeccCCCC
Confidence 8999999865 45678999999999999998643 6799999999999999999999874 2346889988 578
Q ss_pred CeEEcCceEEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCcc
Q psy8840 73 GVYVKNLQSYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSER 152 (355)
Q Consensus 73 ~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsEr 152 (355)
+++|.|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|++..... .....|+|+|||||||||
T Consensus 209 ~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~~----~~~~~skL~lVDLAGSEr 284 (376)
T 2rep_A 209 ELTVTNARYVPVSCEKEVDALLHLARQNRAVARTAQNERSSRSHSVFQLQISGEHSSR----GLQCGAPLSLVDLAGSER 284 (376)
T ss_dssp CEEETTCCCEEECSHHHHHHHHHHHHHHHHHCC-----CGGGSEEEEEEEEEEEESSS----CCEEEEEEEEEECCCCC-
T ss_pred CEEECCcEEEEeCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEEEecCC----CcEEEeEEEEEECCCCcc
Confidence 9999999999999999999999999999999999999999999999999998765432 235789999999999999
Q ss_pred ccCCCccc----cchHHHHhhhhhhHHHHHHHHHHhCCCCCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHH
Q psy8840 153 QSKTGATG----KRLKEASKINLSLSALGNVISALVDGKNIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEES 228 (355)
Q Consensus 153 ~~~t~~~g----~~~~E~~~IN~SL~~L~~vI~aL~~~~~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eT 228 (355)
..++++.| +|++|+.+||+||++||+||.||++++ .|||||||||||||||+|||||+|+|||||||+..+++||
T Consensus 285 ~~~t~~~g~~~~~rlkE~~~INkSL~aLg~vI~aL~~~~-~hVPYRdSkLT~LLqdsLgGnskT~mIa~isP~~~~~~ET 363 (376)
T 2rep_A 285 LDPGLALGPGERERLRETQAINSSLSTLGLVIMALSNKE-SHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSES 363 (376)
T ss_dssp -----------------------CHHHHHHHHHHHHTTC-SCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCCGGGHHHH
T ss_pred cccccccCccccchhhHHhHhhHHHHHHHHHHHHHhcCC-CccCCcCCHHHHHHHHhhCCCCeEEEEEEeCCchhhHHHH
Confidence 99999999 999999999999999999999999864 5999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccC
Q psy8840 229 LTTLRYANRAKNI 241 (355)
Q Consensus 229 lsTL~fa~rak~I 241 (355)
++||+||+|++++
T Consensus 364 lsTLrfA~Rv~~~ 376 (376)
T 2rep_A 364 LNSLRFASKVNQC 376 (376)
T ss_dssp HHHHHHHHHHC--
T ss_pred HHHHHHHHHHhcC
Confidence 9999999999863
No 21
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9
Probab=100.00 E-value=4.2e-69 Score=523.23 Aligned_cols=239 Identities=35% Similarity=0.506 Sum_probs=202.4
Q ss_pred eEEeecCCCC--CCCCCCchHHHHHHHHHHhhhc-CCceEEEEEEEEEEEcchhccccCCcccccccceecCCCCeEEcC
Q psy8840 2 YKYMIIGSKE--SAESKGVIPNSFDQIFSHIART-ENKQYLIRASYLEIYQEEIRDLLDKDQSKRYELRENPDSGVYVKN 78 (355)
Q Consensus 2 KTyTm~G~~~--~~~~~GIipra~~~lF~~i~~~-~~~~~~v~vS~~EIyne~v~DLL~~~~~~~l~i~e~~~~~~~v~~ 78 (355)
|||||+|+.. .++.+|||||++++||..++.. .+..|.|+|||+|||||+|+|||.+. +.+.+++++.++++|.|
T Consensus 98 KTyTM~G~~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~--~~~~~~e~~~~~~~v~g 175 (360)
T 1ry6_A 98 KTYTMLGSQPYGQSDTPGIFQYAAGDIFTFLNIYDKDNTKGIFISFYEIYCGKLYDLLQKR--KMVAALENGKKEVVVKD 175 (360)
T ss_dssp HHHHHHBSSSTTTSSCBCHHHHHHHHHHHHHHHHCSSSCEEEEEEEEEEETTEEEESCCC-------------CCBCGGG
T ss_pred CCEEEecCCCCCCccCCCcHHHHHHHHHHHHHhhccCCceEEEEEEEEeeCCeeEEcccCC--ccceeeEcCCCCEEEcC
Confidence 8999999752 2456799999999999999864 36789999999999999999999874 56788999999999999
Q ss_pred ceEEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCccccCCCc
Q psy8840 79 LQSYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSERQSKTGA 158 (355)
Q Consensus 79 l~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~t~~ 158 (355)
++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|++.. .....|+|+|||||||||..++++
T Consensus 176 l~~~~V~s~~e~~~~l~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~-------~~~~~skL~lVDLAGSEr~~~t~~ 248 (360)
T 1ry6_A 176 LKILRVLTKEELILKMIDGVLLRKIGVNSQNDESSRSHAILNIDLKDIN-------KNTSLGKIAFIDLAGSERGADTVS 248 (360)
T ss_dssp SCCEEECSHHHHHHHHHHHHHHHHHCTTCCTTGGGGSEEEEEEEEEETT-------TTEEEEEEEEEECCCTTGGGGGGC
T ss_pred cEEEEeCCHHHHHHHHHHHhhhhhcccccccCCCccceEEEEEEEEecc-------CCcceeEEEEEECCCCcccccccc
Confidence 9999999999999999999999999999999999999999999997642 235789999999999999999988
Q ss_pred cc-cchHHHHhhhhhhHHHHHHHHHHhCCCCCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHHHHHHHHHH
Q psy8840 159 TG-KRLKEASKINLSLSALGNVISALVDGKNIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESLTTLRYANR 237 (355)
Q Consensus 159 ~g-~~~~E~~~IN~SL~~L~~vI~aL~~~~~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTlsTL~fa~r 237 (355)
.| .+++|+.+||+||++||+||.+|++++ .|||||||||||||||+|||||+|+|||||||+..+++||++||+||+|
T Consensus 249 ~~~~~~~E~~~INkSL~aLg~vI~aL~~~~-~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~r 327 (360)
T 1ry6_A 249 QNKQTQTDGANINRSLLALKECIRAMDSDK-NHIPFRDSELTKVLRDIFVGKSKSIMIANISPTISCCEQTLNTLRYSSR 327 (360)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHTTST-TSCCGGGCHHHHHTGGGGSSSCEEEEEEEECCBGGGHHHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhcCC-CCCccccCHHHHHHHHHhCCCCeEEEEEEeCCCcccHHHHHHHHHHHHH
Confidence 76 568999999999999999999998764 5999999999999999999999999999999999999999999999999
Q ss_pred hccCccccccCCC
Q psy8840 238 AKNIKNQPRVNED 250 (355)
Q Consensus 238 ak~I~n~~~~n~~ 250 (355)
||+|+|.|..|..
T Consensus 328 ak~i~n~~~~~~~ 340 (360)
T 1ry6_A 328 VKNKGNSKLEGKP 340 (360)
T ss_dssp HCC----------
T ss_pred HhhcccCcccCCC
Confidence 9999997665543
No 22
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}
Probab=100.00 E-value=1.3e-68 Score=518.87 Aligned_cols=235 Identities=38% Similarity=0.611 Sum_probs=193.0
Q ss_pred eEEeecCCCCCCCCCCchHHHHHHHHHHhhhcC--CceEEEEEEEEEEEcchhccccCCcc----------cccccceec
Q psy8840 2 YKYMIIGSKESAESKGVIPNSFDQIFSHIARTE--NKQYLIRASYLEIYQEEIRDLLDKDQ----------SKRYELREN 69 (355)
Q Consensus 2 KTyTm~G~~~~~~~~GIipra~~~lF~~i~~~~--~~~~~v~vS~~EIyne~v~DLL~~~~----------~~~l~i~e~ 69 (355)
|||||+|+. .|||||++++||..++..+ +..|.|+|||+|||||+|+|||.+.. ...+.++++
T Consensus 99 KTyTm~g~~-----~Giipr~~~~lF~~~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~~~i~~~ 173 (349)
T 3t0q_A 99 KTYTMLNAG-----DGMIPMTLSHIFKWTANLKERGWNYEMECEYIEIYNETILDLLRDFKSHDNIDEILDSQKHDIRHD 173 (349)
T ss_dssp HHHHHHSTT-----TSHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEETTC---------------CCCEEEE
T ss_pred CceEeCCCC-----CchhhHHHHHHHHHHHHhhhcCceeEEEEEEEEEEcchhhccccccccccccccccccccceeEEe
Confidence 899999963 3999999999999988643 67999999999999999999998642 356778877
Q ss_pred CC-CCeEEcCceEEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCC
Q psy8840 70 PD-SGVYVKNLQSYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLA 148 (355)
Q Consensus 70 ~~-~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLA 148 (355)
+. +|++|.|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|++.+... .....|+|+|||||
T Consensus 174 ~~~~g~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~----~~~~~~kL~lVDLA 249 (349)
T 3t0q_A 174 HEKQGTYITNVTRMKMTSTSQVDTILKKASKMRSTAATRSNERSSRSHSVFMVHINGRNLHT----GETSQGKLNLVDLA 249 (349)
T ss_dssp TTTTEEEETTCCCEECCCHHHHHHHHHHC------------CTGGGSEEEEEEEEEEEETTT----CCEEEEEEEEEECC
T ss_pred cCCCCEEEeCCEEEEeCCHHHHHHHHHHHHHhCcccccccccccCCcceEEEEEEEEEecCC----CCeeEEEEEEEeCC
Confidence 65 57999999999999999999999999999999999999999999999999998876432 23578999999999
Q ss_pred CCccccCCCccccchHHHHhhhhhhHHHHHHHHHHhCCCC--CcccCCCCcccccccccCCCCceEEEEEecCCCCCCHH
Q psy8840 149 GSERQSKTGATGKRLKEASKINLSLSALGNVISALVDGKN--IHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYE 226 (355)
Q Consensus 149 GsEr~~~t~~~g~~~~E~~~IN~SL~~L~~vI~aL~~~~~--~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~ 226 (355)
||||..++++.|+|++|+.+||+||++||+||.||++++. .|||||||||||||||+|||||+|+|||||||+..+++
T Consensus 250 GSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lLqdsLgGnskt~mi~~vsP~~~~~~ 329 (349)
T 3t0q_A 250 GSERINSSAVTGERLRETQNINKSLSCLGDVIYALNTPDAGKRYIPFRNSKLTYLLQYSLVGDSKTLMFVNIPPDPNHIS 329 (349)
T ss_dssp CCCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCCCGGGSHHHHHHGGGSSTTCEEEEEEEECCCGGGHH
T ss_pred CCCccccccCccccchhHHhhhHhHHHHHHHHHHHhcccCCCCcCCCcCCHHHHHHHHhcCCCceEEEEEEeCCchhhHH
Confidence 9999999999999999999999999999999999988643 59999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCcccc
Q psy8840 227 ESLTTLRYANRAKNIKNQP 245 (355)
Q Consensus 227 eTlsTL~fa~rak~I~n~~ 245 (355)
||++||+||+|+++|+..+
T Consensus 330 ETl~TL~fA~rv~~ik~~~ 348 (349)
T 3t0q_A 330 ETLNSLRFASKVNSTKIAK 348 (349)
T ss_dssp HHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHhhhcccCC
Confidence 9999999999999998765
No 23
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-67 Score=519.89 Aligned_cols=236 Identities=40% Similarity=0.625 Sum_probs=204.7
Q ss_pred eEEeecCCCCCCCCCCchHHHHHHHHHHhhhc--CCceEEEEEEEEEEEcchhccccCCcc--------cccccceecCC
Q psy8840 2 YKYMIIGSKESAESKGVIPNSFDQIFSHIART--ENKQYLIRASYLEIYQEEIRDLLDKDQ--------SKRYELRENPD 71 (355)
Q Consensus 2 KTyTm~G~~~~~~~~GIipra~~~lF~~i~~~--~~~~~~v~vS~~EIyne~v~DLL~~~~--------~~~l~i~e~~~ 71 (355)
|||||+|+. .|||||++++||..+... ....|.|+|||+|||||+|+|||.+.. ..++.+++++.
T Consensus 154 KTyTM~g~~-----~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~i~~~~~ 228 (403)
T 4etp_A 154 KTFTMLNPG-----DGIIPSTISHIFNWINKLKTKGWDYKVNAEFIEIYNENIVDLLRSDNNNKEDTSIGLKHEIRHDQE 228 (403)
T ss_dssp HHHHHHCTT-----TSHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEEETTEEEETTCC--------CCSCCCCEEEETT
T ss_pred CceEeCCCC-----CccchhHHHHHHHHHHhhhccCceEEEEEEEEEEecceeeEccCCccccccccccCcceeeEEeCC
Confidence 899999863 399999999999999863 367999999999999999999998753 34567777764
Q ss_pred -CCeEEcCceEEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCC
Q psy8840 72 -SGVYVKNLQSYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGS 150 (355)
Q Consensus 72 -~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGs 150 (355)
++++|.|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+.+... +....|+|+|||||||
T Consensus 229 ~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~----~~~~~~kL~lVDLAGS 304 (403)
T 4etp_A 229 TKTTTITNVTSVKLESEEMVEIILKKANKLRSTASTASNEHSSRSHSIFIIHLSGSNAKT----GAHSYGTLNLVDLAGS 304 (403)
T ss_dssp TTEEEETTCCCEECCCHHHHHHHHHHHC--C----CHHHHHHHTSEEEEEEEEEEEETTT----CCEEEEEEEEEECCCC
T ss_pred CCCEEecCcEEEEeCCHHHHHHHHHHHHHhcccccccCCcccCCcccEEEEEEEEeecCC----CCeeEEEEEEEECCCC
Confidence 57999999999999999999999999999999999999999999999999998876432 2357899999999999
Q ss_pred ccccCCCccccchHHHHhhhhhhHHHHHHHHHHhCCCC--CcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHH
Q psy8840 151 ERQSKTGATGKRLKEASKINLSLSALGNVISALVDGKN--IHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEES 228 (355)
Q Consensus 151 Er~~~t~~~g~~~~E~~~IN~SL~~L~~vI~aL~~~~~--~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eT 228 (355)
||..++++.|.|++|+.+||+||++||+||.||+++.. .||||||||||+||||+|||||+|+|||||||+..+++||
T Consensus 305 Er~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~LLqdsLgGnskt~mi~~vsP~~~~~~ET 384 (403)
T 4etp_A 305 ERINVSQVVGDRLRETQNINKSLSALGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINET 384 (403)
T ss_dssp CCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHTSSCTTTSCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCSGGGHHHH
T ss_pred ccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcCCcccchHHHHHHHhcCCCceEEEEEEeCCchhhHHHH
Confidence 99999999999999999999999999999999987543 5999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCccccc
Q psy8840 229 LTTLRYANRAKNIKNQPR 246 (355)
Q Consensus 229 lsTL~fa~rak~I~n~~~ 246 (355)
++||+||+|+++|+..|+
T Consensus 385 l~TL~fA~rv~~~~~~~r 402 (403)
T 4etp_A 385 LNSLRFASKVNSTRLVSR 402 (403)
T ss_dssp HHHHHHHHHHCCC-----
T ss_pred HHHHHHHHHHhhcccCCC
Confidence 999999999999998875
No 24
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*
Probab=100.00 E-value=1.4e-67 Score=515.33 Aligned_cols=231 Identities=35% Similarity=0.494 Sum_probs=184.5
Q ss_pred eEEeecCCCC---CCCCCCchHHHHHHHHHHhhhc--CCceEEEEEEEEEEEcchhccccCCcccccccceecCCCCeEE
Q psy8840 2 YKYMIIGSKE---SAESKGVIPNSFDQIFSHIART--ENKQYLIRASYLEIYQEEIRDLLDKDQSKRYELRENPDSGVYV 76 (355)
Q Consensus 2 KTyTm~G~~~---~~~~~GIipra~~~lF~~i~~~--~~~~~~v~vS~~EIyne~v~DLL~~~~~~~l~i~e~~~~~~~v 76 (355)
|||||+|+.. ....+|||||++++||..+... .+..|.|+|||+|||||+|+|||++. .++.+++|+.++++|
T Consensus 148 KTyTM~G~~~~~~~~~~~Giipr~~~~lF~~~~~~~~~~~~~~V~vS~~EIYnE~v~DLL~~~--~~l~i~ed~~~~v~v 225 (387)
T 2heh_A 148 KTHTMGGDLSGKAQNASKGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEIYNGKLFDLLNKK--AKLRVLEDGKQQVQV 225 (387)
T ss_dssp HHHHHC-----------CCHHHHHHHHHHHHHTSHHHHTTTCEEEEEEEEEETTEEEETTTTT--EECEEEECTTCCEEE
T ss_pred CCeEeccCCCCCCcccCCceehhhHHHHHHHhhcccccCceEEEEEEEEEecCCeEEECCCCC--ccceEEEcCCCCEEe
Confidence 8999999643 2356799999999999998754 26789999999999999999999874 679999999999999
Q ss_pred cCceEEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCccccCC
Q psy8840 77 KNLQSYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSERQSKT 156 (355)
Q Consensus 77 ~~l~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~t 156 (355)
.||+++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|++. ....|+|+|||||||||..++
T Consensus 226 ~gl~~~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~---------~~~~skL~lVDLAGSER~~~t 296 (387)
T 2heh_A 226 VGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAK---------GRMHGKFSLVDLAGNERGADT 296 (387)
T ss_dssp ETCCCEEESSHHHHHHHHHHHHHHC---------CGGGSEEEEEEEEESS---------SSEEEEEEEEECCCCC-----
T ss_pred cCCEEEEeCCHHHHHHHHHHHHhhCCcccCcCcCCcccceEEEEEEEEEC---------CeeeeEEEEEECCCCcccccc
Confidence 99999999999999999999999999999999999999999999999753 136799999999999999888
Q ss_pred C-ccccchHHHHhhhhhhHHHHHHHHHHhCCCCCcccCCCCccccccccc-CCCCceEEEEEecCCCCCCHHHHHHHHHH
Q psy8840 157 G-ATGKRLKEASKINLSLSALGNVISALVDGKNIHVPYRDSKLTRLLQDS-LGGNSKTLMIANIGPASYNYEESLTTLRY 234 (355)
Q Consensus 157 ~-~~g~~~~E~~~IN~SL~~L~~vI~aL~~~~~~~iPyRdSkLT~lL~ds-LgGnskt~mI~~vsp~~~~~~eTlsTL~f 234 (355)
+ +.+.+++|+.+||+||++||+||.||++++ .|||||||||||||||+ |||||+|+|||||||+..+++||++||+|
T Consensus 297 ~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~-~hvPYRdSKLTrlLqdsllGgnskT~mIa~isP~~~~~~ETlsTLrf 375 (387)
T 2heh_A 297 SSADRQTRMEGAEINKSLLALKECIRALGQNK-AHTPFRESKLTQVLRDSFIGENSRTCMIATISPGISSCEYTLNTLRY 375 (387)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHTTC-SCCCGGGSHHHHHTGGGGSSTTEEEEEEEEECCBGGGHHHHHHHHHH
T ss_pred ccccccchhhHHHHhHHHHHHHHHHHHHhcCC-CCCCccccHHHHHHhhhccCCCCeEEEEEEeCCccchHHHHHHHHHH
Confidence 6 467888999999999999999999999854 59999999999999999 69999999999999999999999999999
Q ss_pred HHHhccCccc
Q psy8840 235 ANRAKNIKNQ 244 (355)
Q Consensus 235 a~rak~I~n~ 244 (355)
|+|||+|++.
T Consensus 376 A~rak~I~~~ 385 (387)
T 2heh_A 376 ADRVKELSPH 385 (387)
T ss_dssp HHHHCC----
T ss_pred HHHhccCcCC
Confidence 9999999875
No 25
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*
Probab=100.00 E-value=2e-67 Score=517.24 Aligned_cols=233 Identities=36% Similarity=0.504 Sum_probs=189.5
Q ss_pred eEEeecCCCC---CCCCCCchHHHHHHHHHHhhhc--CCceEEEEEEEEEEEcchhccccCCcccccccceecCCCCeEE
Q psy8840 2 YKYMIIGSKE---SAESKGVIPNSFDQIFSHIART--ENKQYLIRASYLEIYQEEIRDLLDKDQSKRYELRENPDSGVYV 76 (355)
Q Consensus 2 KTyTm~G~~~---~~~~~GIipra~~~lF~~i~~~--~~~~~~v~vS~~EIyne~v~DLL~~~~~~~l~i~e~~~~~~~v 76 (355)
|||||+|+.. .+..+|||||++++||..+... .+..|.|+|||+|||||+|+|||++ ...+.+++|+.++++|
T Consensus 168 KTyTM~G~~~~~~~~~~~Giipra~~~lF~~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~--~~~l~i~ed~~~~v~V 245 (410)
T 1v8k_A 168 KTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEIYNGKVFDLLNK--KAKLRVLEDSRQQVQV 245 (410)
T ss_dssp HHHHHHCBC----CBGGGSHHHHHHHHHHHHHTSHHHHTTCCEEEEEEEEEETTEEEETTTT--TEEEEEEECSSCCEEE
T ss_pred CCeEeecCCCCCCccccCcchhhhHHHHHHHHhhhcccCccEEEEEEEEEeeCCEEEECCCC--CCCceEEECCCCCeEe
Confidence 8999999642 2356799999999999998754 2678999999999999999999987 4679999999999999
Q ss_pred cCceEEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCccccCC
Q psy8840 77 KNLQSYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSERQSKT 156 (355)
Q Consensus 77 ~~l~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~t 156 (355)
.||+++.|.|++|++.+|..|..+|++++|.||..|||||+||+|+|++.. ...|+|+|||||||||..++
T Consensus 246 ~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~---------~~~skL~lVDLAGSER~~~t 316 (410)
T 1v8k_A 246 VGLQEYLVTCADDVIKMINMGSACRTSGQTFANSNSSRSHACFQILLRTKG---------RLHGKFSLVDLAGNERGADT 316 (410)
T ss_dssp ETCCCEEESSHHHHHHHHHHHHHTCC--------CCCSSEEEEEEEEESSS---------SEEEEEEEEECCCCCC----
T ss_pred cCCEEEEeCCHHHHHHHHHHHHhhCCcccccCCCCCCCceEEEEEEEEeCC---------cceeEEEEEECCCccccccc
Confidence 999999999999999999999999999999999999999999999997531 36799999999999999888
Q ss_pred Cc-cccchHHHHhhhhhhHHHHHHHHHHhCCCCCcccCCCCccccccccc-CCCCceEEEEEecCCCCCCHHHHHHHHHH
Q psy8840 157 GA-TGKRLKEASKINLSLSALGNVISALVDGKNIHVPYRDSKLTRLLQDS-LGGNSKTLMIANIGPASYNYEESLTTLRY 234 (355)
Q Consensus 157 ~~-~g~~~~E~~~IN~SL~~L~~vI~aL~~~~~~~iPyRdSkLT~lL~ds-LgGnskt~mI~~vsp~~~~~~eTlsTL~f 234 (355)
++ .|.+++|+.+||+||++||+||.+|++++ .||||||||||+||||+ |||||+|+|||||||+..+++||++||+|
T Consensus 317 ~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~-~hIPYRdSKLTrLLqdsllGgnskT~mIa~iSP~~~~~~ETlsTLrf 395 (410)
T 1v8k_A 317 SSADRQTRMEGAEINKSLLALKECIRALGQNK-AHTPFRESKLTQVLRDSFIGENSRTCMIAMISPGISSCEYTLNTLRY 395 (410)
T ss_dssp --------TTHHHHHHHHHHHHHHHHHHTC-------CCCCHHHHHTTHHHHSSSEEEEEEEEECCBGGGHHHHHHHHHH
T ss_pred cccccchhHHHHHHhHHHHHHHHHHHHHhcCC-CCCCcccchhHHHHhhcccCCCceEEEEEEeCCccccHHHHHHHHHH
Confidence 64 67788899999999999999999998754 59999999999999999 59999999999999999999999999999
Q ss_pred HHHhccCccccc
Q psy8840 235 ANRAKNIKNQPR 246 (355)
Q Consensus 235 a~rak~I~n~~~ 246 (355)
|+||+.|..+|.
T Consensus 396 A~rak~i~~~~~ 407 (410)
T 1v8k_A 396 ADRVKELSHHHH 407 (410)
T ss_dssp HHHHHTTC----
T ss_pred HHHhccCCCCCC
Confidence 999999998874
No 26
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=100.00 E-value=2.9e-66 Score=511.08 Aligned_cols=231 Identities=40% Similarity=0.613 Sum_probs=195.4
Q ss_pred eEEeecCCCCCCCCCCchHHHHHHHHHHhhhcC--CceEEEEEEEEEEEcchhccccCCccccccc--ceecCCCCeEEc
Q psy8840 2 YKYMIIGSKESAESKGVIPNSFDQIFSHIARTE--NKQYLIRASYLEIYQEEIRDLLDKDQSKRYE--LRENPDSGVYVK 77 (355)
Q Consensus 2 KTyTm~G~~~~~~~~GIipra~~~lF~~i~~~~--~~~~~v~vS~~EIyne~v~DLL~~~~~~~l~--i~e~~~~~~~v~ 77 (355)
|||||+|.++++ |||||++++||..+...+ +..|.|+|||+|||||+|+|||++. .+.+. +.+++.++++|.
T Consensus 152 KTyTM~G~~~~~---Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~-~~~~~i~~~~~~~~~~~v~ 227 (412)
T 3u06_A 152 KTYTMDGVPESV---GVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNE-QKDMEIRMAKNNKNDIYVS 227 (412)
T ss_dssp HHHHHTEETTEE---CHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEETTCCS-CCCCCEEECSSCTTSEEET
T ss_pred CeeEecCCCCCC---ccHHHHHHHHHHhhhhhcccCceEEEEEEEEEEeCCeeEEcCCCC-CCCceeeeeecCCCCEEEc
Confidence 899999976554 999999999999998643 6799999999999999999999875 33444 446788899999
Q ss_pred CceEEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCccccCCC
Q psy8840 78 NLQSYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSERQSKTG 157 (355)
Q Consensus 78 ~l~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~t~ 157 (355)
|++++.|.|++|++.+|..|..+|++++|.||..|||||+||+|+|.+..... .....|+|+|||||||||..
T Consensus 228 gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~----~~~~~~kL~lVDLAGSEr~~--- 300 (412)
T 3u06_A 228 NITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEK----QEISVGSINLVDLAGSESPK--- 300 (412)
T ss_dssp TCCCEECCSHHHHHHHHHHHHHHCC-----CHHHHTTCEEEEEEEEEEEETTT----TEEEEEEEEEEECCCCCC-----
T ss_pred ceEEEEeCCHHHHHHHHHHHHhcccccccCCCCCCcCceEEEEEEEEEEeCCC----CCEEEEEEEEEECCCCCcCC---
Confidence 99999999999999999999999999999999999999999999998765432 35688999999999999874
Q ss_pred ccccchHHHHhhhhhhHHHHHHHHHHhCCCCCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHHHHHHHHHH
Q psy8840 158 ATGKRLKEASKINLSLSALGNVISALVDGKNIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESLTTLRYANR 237 (355)
Q Consensus 158 ~~g~~~~E~~~IN~SL~~L~~vI~aL~~~~~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTlsTL~fa~r 237 (355)
.+.+++|+.+||+||++||+||.||++++ .|||||||||||||||+|||||+|+|||||||+..+++||++||+||+|
T Consensus 301 -~~~rl~E~~~INkSL~aLg~vI~aL~~~~-~hiPyRdSkLT~LLqdsLgGnskt~mI~~vsP~~~~~~ETl~TLrfA~r 378 (412)
T 3u06_A 301 -TSTRMTETKNINRSLSELTNVILALLQKQ-DHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAAS 378 (412)
T ss_dssp ---------CTTTHHHHHHHHHHHHHHTTC-SCCCGGGSHHHHHHGGGTSTTCEEEEEEEECCBGGGHHHHHHHHHHHHH
T ss_pred -ccchhHhHHHHhHHHHHHHHHHHHHhccC-CCCCccccHHHHHHHHhcCCCceEEEEEEeCCChhhHHHHHHHHHHHHH
Confidence 46899999999999999999999999854 5999999999999999999999999999999999999999999999999
Q ss_pred hccCcccc
Q psy8840 238 AKNIKNQP 245 (355)
Q Consensus 238 ak~I~n~~ 245 (355)
+++|+..+
T Consensus 379 v~~i~~~~ 386 (412)
T 3u06_A 379 VNSCKMTK 386 (412)
T ss_dssp HHHHCC--
T ss_pred Hhhccccc
Confidence 99998544
No 27
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A*
Probab=100.00 E-value=2.1e-65 Score=494.55 Aligned_cols=227 Identities=31% Similarity=0.476 Sum_probs=180.4
Q ss_pred eEEeecCCCC---CCCCCCchHHHHHHHHHHhhhcC---CceEEEEEEEEEEEcchhccccCCcccccccceecCCCCeE
Q psy8840 2 YKYMIIGSKE---SAESKGVIPNSFDQIFSHIARTE---NKQYLIRASYLEIYQEEIRDLLDKDQSKRYELRENPDSGVY 75 (355)
Q Consensus 2 KTyTm~G~~~---~~~~~GIipra~~~lF~~i~~~~---~~~~~v~vS~~EIyne~v~DLL~~~~~~~l~i~e~~~~~~~ 75 (355)
|||||+|+.. .++.+|||||++++||..+.... ...|.|++||+|||||+|+|||++.+..+. . +..
T Consensus 108 KTyTM~g~~~~~~~~~~~GIipra~~~LF~~i~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~--~-----~~~ 180 (344)
T 3dc4_A 108 KSYSMGMTPPGEILPEHLGILPRALGDIFERVTARQENNKDAIQVYASFIEIYNEKPFDLLGSTPHMPM--V-----AAR 180 (344)
T ss_dssp HHHHHTCSCGGGSCGGGCCHHHHHHHHHHHHHHHSSSSCSSCCEEEEEEEEEESSCEEETTSSCTTSBC--C-----SST
T ss_pred CCeEEcCCCCCCCCcccCCcHHHHHHHHHHHHHhhhhccccceEEEEEEEEEeCCeeEEccCCCCCCcc--c-----ccc
Confidence 8999998753 24678999999999999998754 347999999999999999999987533221 1 222
Q ss_pred EcCceEEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCccccC
Q psy8840 76 VKNLQSYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSERQSK 155 (355)
Q Consensus 76 v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~ 155 (355)
+.|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|++. ...|+|+|||||||||..+
T Consensus 181 ~~~~~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~Ifti~v~~~----------~~~skl~lVDLAGSEr~~~ 250 (344)
T 3dc4_A 181 CQRCTCLPLHSQADLHHILELGTRNRRVRPTNMNSNSSRSHAIVTIHVKSK----------THHSRMNIVDLAGSEGVRR 250 (344)
T ss_dssp TTCSCCEECSSHHHHHHHHHHHHHTCC----------CCEEEEEEEEEECS----------SCEEEEEEEECCCCCCC--
T ss_pred ccCceecccCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEec----------CcEEEEEEEECCCCccccc
Confidence 458999999999999999999999999999999999999999999999642 2469999999999999999
Q ss_pred CCccccchHHHHhhhhhhHHHHHHHHHHhCCCCCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHHHHHHHH
Q psy8840 156 TGATGKRLKEASKINLSLSALGNVISALVDGKNIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESLTTLRYA 235 (355)
Q Consensus 156 t~~~g~~~~E~~~IN~SL~~L~~vI~aL~~~~~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTlsTL~fa 235 (355)
+++.|.+++|+.+||+||++||+||.+|++++ .|||||||||||||||+|||||+|+|||||||+..+++||++||+||
T Consensus 251 t~~~g~r~~E~~~INkSL~aLg~vI~aL~~~~-~hiPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTL~fA 329 (344)
T 3dc4_A 251 TGHEGVARQEGVNINLGLLSINKVVMSMAAGH-TVIPYRDSVLTTVLQASLTAQSYLTFLACISPHQCDLSETLSTLRFG 329 (344)
T ss_dssp -----------CCSCCHHHHHHHHHHHHHTTC-SSCCGGGSHHHHHTTTTSSTTCEEEEEEEECCCGGGHHHHHHHHHHH
T ss_pred cccccchhHHHHHHhHhHHHHHHHHHHHhccC-CcCCccccHHHHHHHHHhCCCCEEEEEEEeCCchhhHHHHHHHHHHH
Confidence 99999999999999999999999999999875 49999999999999999999999999999999999999999999999
Q ss_pred HHhccCccccc
Q psy8840 236 NRAKNIKNQPR 246 (355)
Q Consensus 236 ~rak~I~n~~~ 246 (355)
+||+.....|.
T Consensus 330 ~ra~~~~~~~~ 340 (344)
T 3dc4_A 330 TSAKAAALEHH 340 (344)
T ss_dssp HHHHHHTTTC-
T ss_pred HHHhhcCCCCC
Confidence 99999887664
No 28
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=100.00 E-value=3.2e-64 Score=530.82 Aligned_cols=232 Identities=40% Similarity=0.637 Sum_probs=192.3
Q ss_pred eEEeecCCCCCCCCCCchHHHHHHHHHHhhhcC--CceEEEEEEEEEEEcchhccccCCc--ccccccceecCC-CCeEE
Q psy8840 2 YKYMIIGSKESAESKGVIPNSFDQIFSHIARTE--NKQYLIRASYLEIYQEEIRDLLDKD--QSKRYELRENPD-SGVYV 76 (355)
Q Consensus 2 KTyTm~G~~~~~~~~GIipra~~~lF~~i~~~~--~~~~~v~vS~~EIyne~v~DLL~~~--~~~~l~i~e~~~-~~~~v 76 (355)
|||||+|+ .+|||||++++||..++... +..|.|+|||+|||||+|+|||++. +..++.+++++. ++++|
T Consensus 476 KT~Tm~g~-----~~Giipr~~~~lf~~~~~~~~~~~~~~v~~s~~Eiyne~i~DLl~~~~~~~~~~~~~~~~~~g~~~v 550 (715)
T 4h1g_A 476 KTFTMSHP-----TNGMIPLSLKKIFNDIEELKEKGWSYTVRGKFIEIYNEAIVDLLNPKIDPNTKYEIKHDDIAGKTTV 550 (715)
T ss_dssp HHHHHHCT-----TTSHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEESSSCCCCTTCCCCEEEETTTTEEEE
T ss_pred hhhccCCC-----CCCcHHHHHHHHHHHHHHhhcCCceEEEEEEEEEEECCEEEECCCCCCCCCCcceeEEecCCCCEEE
Confidence 78999884 34999999999999998643 6789999999999999999999874 345577776554 55999
Q ss_pred cCceEEEecCHHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCccccCC
Q psy8840 77 KNLQSYICKNVKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSERQSKT 156 (355)
Q Consensus 77 ~~l~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~t 156 (355)
.||+++.|.|++|++.+|..|..+|++++|.+|..|||||+||+|+|++.+... .....|+|+|||||||||..++
T Consensus 551 ~~l~~~~v~~~~~~~~~~~~g~~~r~~~~t~~n~~ssRSH~i~~i~~~~~~~~~----~~~~~~~l~lvDLAGsEr~~~~ 626 (715)
T 4h1g_A 551 TNVSTIDIKSPEQAITILNQANKKRSTAATKSNDHSSRSHSIFIIDLQGYNSLT----KESSYGTLNLIDLAGSERLNNS 626 (715)
T ss_dssp TTCCCEECSCHHHHHHHHHHHHCC----------CGGGSEEEEEEEEEEEETTT----CCEEEEEEEEEECCCCCC----
T ss_pred eCCEEEEcCCHHHHHHHHHHHHhccCcccccccCccccccEEEEEEEEEEecCC----CCEeEEEEEEEeCCCccccccc
Confidence 999999999999999999999999999999999999999999999998775432 3467899999999999999999
Q ss_pred CccccchHHHHhhhhhhHHHHHHHHHHhCCCCCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHHHHHHHHH
Q psy8840 157 GATGKRLKEASKINLSLSALGNVISALVDGKNIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESLTTLRYAN 236 (355)
Q Consensus 157 ~~~g~~~~E~~~IN~SL~~L~~vI~aL~~~~~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTlsTL~fa~ 236 (355)
++.|.|++|+.+||+||++||+||.+|+.++..|||||||||||||||+|||||+|+|||||||+..+++||++||+||+
T Consensus 627 ~~~g~~~~E~~~IN~sL~~L~~vi~al~~~~~~~vpyR~SkLT~lL~~slggn~~t~~i~~isp~~~~~~et~~tL~fa~ 706 (715)
T 4h1g_A 627 RAEGDRLKETQAINKSLSCLGDVIHSLNLKDGSHVPYRNSKLTYLLKHSLGGNSKTLMFVNISPLTKDLNETINSLRFAT 706 (715)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHCSCCCCCGGGCHHHHHTGGGTSTTCEEEEEEEECCBGGGHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCccCHHHHHHHhhcCCCceEEEEEEECCChhhHHHHHHHHHHHH
Confidence 99999999999999999999999999998777899999999999999999999999999999999999999999999999
Q ss_pred HhccCc
Q psy8840 237 RAKNIK 242 (355)
Q Consensus 237 rak~I~ 242 (355)
|||+|+
T Consensus 707 r~~~i~ 712 (715)
T 4h1g_A 707 KVNNTR 712 (715)
T ss_dssp HHCC--
T ss_pred Hhccce
Confidence 999997
No 29
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9
Probab=100.00 E-value=4.8e-35 Score=232.61 Aligned_cols=97 Identities=51% Similarity=0.740 Sum_probs=90.8
Q ss_pred HhhhhhhHHHHHHHHHHhCCCCCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHHHHHHHHHHhccCccccc
Q psy8840 167 SKINLSLSALGNVISALVDGKNIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESLTTLRYANRAKNIKNQPR 246 (355)
Q Consensus 167 ~~IN~SL~~L~~vI~aL~~~~~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTlsTL~fa~rak~I~n~~~ 246 (355)
++||+||++||+||.+|++++..||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+||+.|+|.|.
T Consensus 2 ~~IN~SL~~Lg~vI~aL~~~~~~hvPyRdSkLT~lL~dsLgGnskt~mi~~vsp~~~~~~ETl~TL~fA~rak~i~~~~~ 81 (100)
T 2kin_B 2 KNINKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLDGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTVS 81 (100)
T ss_dssp CBSSHHHHHHHHHHHHHHHTCCSSCCGGGCHHHHHTHHHHHSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCEEEEC
T ss_pred CcchHHHHHHHHHHHHHHhcCCCCCCCccchHHHHHHHHhcCCCceeEEEEeCcccchHHHHHHHHHHHHHHHhccCcce
Confidence 57999999999999999998777999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCch-HHHHHHHHHHH
Q psy8840 247 VNEDPK-EALLREYQEEI 263 (355)
Q Consensus 247 ~n~~~~-~~~~~~l~~ei 263 (355)
+|+++. +.++++|++|+
T Consensus 82 ~n~~~~~~~l~~~~~~e~ 99 (100)
T 2kin_B 82 VNLELTAEEWKKKYEKEK 99 (100)
T ss_dssp CEEECCHHHHHHHHHHHH
T ss_pred eccCCCHHHHHHHHHHhh
Confidence 998754 46778888876
No 30
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.97 E-value=1.2e-32 Score=225.79 Aligned_cols=98 Identities=50% Similarity=0.742 Sum_probs=88.4
Q ss_pred hhhhHHHHHHHHHHhCCCCCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHHHHHHHHHHhccCccccccCC
Q psy8840 170 NLSLSALGNVISALVDGKNIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESLTTLRYANRAKNIKNQPRVNE 249 (355)
Q Consensus 170 N~SL~~L~~vI~aL~~~~~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTlsTL~fa~rak~I~n~~~~n~ 249 (355)
|+||++||+||.+|++++..||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+||+.|+|.|.+|.
T Consensus 1 N~SL~~Lg~vi~aL~~~~~~hvPyRdSkLT~lL~dsLggn~~t~~i~~isp~~~~~~eTl~TL~fa~rak~i~n~~~~n~ 80 (117)
T 3kin_B 1 NKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTVSVNL 80 (117)
T ss_dssp CCHHHHHHHHHHHHHHSCCSSCCGGGSHHHHHTHHHHHSSSEEEEEEEECCSGGGHHHHHHHHHHHHHHTTCEEEECCCB
T ss_pred CCCHHHHHHHHHHHHhCCCCCCCCcchHHHHHHHHHcCCCccceeeeeeCCCcccHHHHHHHHHHHHHhCcccCCceecC
Confidence 89999999999999998778999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchH-HHHHHHHHHHHHHH
Q psy8840 250 DPKE-ALLREYQEEIQRLK 267 (355)
Q Consensus 250 ~~~~-~~~~~l~~ei~~Lk 267 (355)
++.. .++++|++|+.+++
T Consensus 81 ~~~~~~l~~~~~~e~~~~~ 99 (117)
T 3kin_B 81 ELTAEEWKKKYEKEKEKNK 99 (117)
T ss_dssp CCCHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHH
Confidence 7654 45566665555443
No 31
>2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae}
Probab=98.77 E-value=4.4e-09 Score=97.18 Aligned_cols=197 Identities=11% Similarity=0.188 Sum_probs=118.9
Q ss_pred CeEEeecCCCCCCCCCCchHHHHHHHHHHhhh-cCCceEEEEEEEEEEE-cchhccccCCc-ccccccceecCCCCeEEc
Q psy8840 1 MYKYMIIGSKESAESKGVIPNSFDQIFSHIAR-TENKQYLIRASYLEIY-QEEIRDLLDKD-QSKRYELRENPDSGVYVK 77 (355)
Q Consensus 1 iKTyTm~G~~~~~~~~GIipra~~~lF~~i~~-~~~~~~~v~vS~~EIy-ne~v~DLL~~~-~~~~l~i~e~~~~~~~v~ 77 (355)
|.+|...|. |=.|||+..+|..... .. +.|.+.+||+||| ||.++|||..+ .+...+|+.+.++..++.
T Consensus 96 IfSyGQTGs-------GKT~ral~q~f~~~~~~~~-~~Y~~tlq~veLy~Ne~~~DLL~~~~~~~k~eIk~~~~g~~iv~ 167 (298)
T 2o0a_A 96 LISLSTTPH-------GSLRESLIKFLAEKDTIYQ-KQYVITLQFVFLSDDEFSQDMLLDYSHNDKDSIKLKFEKHSISL 167 (298)
T ss_dssp EEEECSSCC-------HHHHHHHHHHHHSTTSHHH-HHEEEEEEEEEEECC-CEEETTSCCC------CEEEECSSCEEE
T ss_pred EEEECCCCC-------CccHHHHHHHHHHhhhhcc-cceEEEEEEEEEecCCchHHhcCCCCCCCcceEEecCCCCEEec
Confidence 355666665 5559999999987754 33 8999999999999 99999999632 234778998899999999
Q ss_pred CceEEEecC-HHHHHHHHhcCcccccccccCCCCCCCCceeEEEEEEEEeeccCCCCCceEEEEEEEeecCCCCccccCC
Q psy8840 78 NLQSYICKN-VKEIEQVMQNGNFNRTIGATNMNEHSSRSHAIFIITIEMSDVREDSSMSQVRVGKLNLVDLAGSERQSKT 156 (355)
Q Consensus 78 ~l~~~~v~s-~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~i~v~~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~t 156 (355)
|++.+.|.+ ++|+..++..+...+ .|. +.-.|+.+.+...+...++..+++ .--++|+.+....
T Consensus 168 ~s~~i~V~~~~edv~~~~~~~~~~~------~~~---~gi~i~k~~~~~~~~~~~~~~~~~-~~d~yf~e~~~~~----- 232 (298)
T 2o0a_A 168 DSKLVIIENGLEDLPLNFSCDEHPN------LPH---SGMGIIKVQFFPRDSKSDGNNDPV-PVDFYFIELNNLK----- 232 (298)
T ss_dssp ESCCEEESSGGGGSCTTTTCC----------------CEEEEEEEEEEESCC-------CC-CEEEEEEEECSHH-----
T ss_pred ccEEEEccccHHHHHHHhhcccccc------cCC---CCceEEEEEEecCcccccccCCCC-ceEEEEEEeCCHH-----
Confidence 999999999 999988885544222 221 234455555543222222221111 1236777654322
Q ss_pred CccccchHHHHhhhhhhHHHHHHHHHHhCCCCCcccCCCCcccccccccCCCCceEEEEEecCCCCCCHHHHHHHHHHHH
Q psy8840 157 GATGKRLKEASKINLSLSALGNVISALVDGKNIHVPYRDSKLTRLLQDSLGGNSKTLMIANIGPASYNYEESLTTLRYAN 236 (355)
Q Consensus 157 ~~~g~~~~E~~~IN~SL~~L~~vI~aL~~~~~~~iPyRdSkLT~lL~dsLgGnskt~mI~~vsp~~~~~~eTlsTL~fa~ 236 (355)
+...|.+ +...+ -+-.|+++-+|+..| -..|.++++++..+.. .-.-|..++
T Consensus 233 ---------------~~~~l~~---~~~~~-----~~~~spi~~il~~ll-~~tks~~~~~l~~~~~----~~~lL~~s~ 284 (298)
T 2o0a_A 233 ---------------SIEQFDK---SIFKK-----ESCETPIALVLKKLI-SDTKSFFLLNLNDSKN----VNKLLTISE 284 (298)
T ss_dssp ---------------HHHHHHH---HHHTC------CCCSHHHHHHHHHH-HHSBCEEEEEECCGGG----HHHHHHHHH
T ss_pred ---------------HHHHHHh---hcccc-----cccCCcHHHHHHHHH-hcCcceEEEEecCCCc----hhHHHHHHH
Confidence 1233333 22222 234577888887776 3578899999986542 223788899
Q ss_pred HhccCccccccC
Q psy8840 237 RAKNIKNQPRVN 248 (355)
Q Consensus 237 rak~I~n~~~~n 248 (355)
+..+++|....+
T Consensus 285 ~i~~~~~~~~~~ 296 (298)
T 2o0a_A 285 EVQTQLCKRKKK 296 (298)
T ss_dssp HHHHHTC-----
T ss_pred HhhcccCccccc
Confidence 988888765543
No 32
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=89.18 E-value=2.1 Score=43.03 Aligned_cols=38 Identities=16% Similarity=0.234 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy8840 315 AEKQKLLQEVESKQKAIEAEKKYTEELAKRINSMESKL 352 (355)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~ 352 (355)
.++.++...++..++.+...+++...+.++++.++.++
T Consensus 544 ~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~~l~~~~ 581 (597)
T 3oja_B 544 QENIALEKQLDNKRAKQAELRQETSLKRQKVKQLEAKK 581 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44445555666666666666777778888888888765
No 33
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=88.53 E-value=7.5 Score=38.93 Aligned_cols=27 Identities=4% Similarity=0.055 Sum_probs=14.2
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHhccC
Q psy8840 215 IANIGPASYNYEESLTTLRYANRAKNI 241 (355)
Q Consensus 215 I~~vsp~~~~~~eTlsTL~fa~rak~I 241 (355)
+||-.+........+..+.....+...
T Consensus 391 ~cc~~~~~~~~~~~~~~l~~~~~~~~~ 417 (597)
T 3oja_B 391 LCCKESDKPYLDRLLQYIALTSVVEKV 417 (597)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHTC
T ss_pred ccccCCCccchhHHHHHhhHHHHhhcc
Confidence 455555555555555555555444443
No 34
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=86.94 E-value=8.1 Score=29.02 Aligned_cols=29 Identities=17% Similarity=0.324 Sum_probs=17.7
Q ss_pred cccccCCCchHHHHHHHHHHHHHHHHHHh
Q psy8840 243 NQPRVNEDPKEALLREYQEEIQRLKNLLN 271 (355)
Q Consensus 243 n~~~~n~~~~~~~~~~l~~ei~~Lk~~l~ 271 (355)
-+|-.+....+..+..+..++..|+..+.
T Consensus 3 VKPLL~~~~~eeEm~~~eeel~~lke~l~ 31 (89)
T 3bas_A 3 HMPLLSIARQEEEMKEQLKQMDKMKEDLA 31 (89)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccccchhHHHHHHHHHHHHHHHHHHH
Confidence 35666666777788888888888888774
No 35
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=83.39 E-value=6.1 Score=43.16 Aligned_cols=34 Identities=24% Similarity=0.367 Sum_probs=18.2
Q ss_pred CCchHHHHHHHHHHhhhc--CCceEEEEEEEEEEEc
Q psy8840 16 KGVIPNSFDQIFSHIART--ENKQYLIRASYLEIYQ 49 (355)
Q Consensus 16 ~GIipra~~~lF~~i~~~--~~~~~~v~vS~~EIyn 49 (355)
++|+-|.|.+|-..|... .......+|..+.||.
T Consensus 405 k~lY~~LF~wlV~~iN~~l~~~~~~~~~IgvLDI~G 440 (1080)
T 2dfs_A 405 KHIYANLFNWIVDHVNKALHSTVKQHSFIGVLDIYG 440 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCSSCCCEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHhhccccccCceEEeeccCC
Confidence 356666666666666541 1112234566666664
No 36
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=80.81 E-value=2.8 Score=41.53 Aligned_cols=17 Identities=29% Similarity=0.544 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHhhc
Q psy8840 257 REYQEEIQRLKNLLNQR 273 (355)
Q Consensus 257 ~~l~~ei~~Lk~~l~~~ 273 (355)
+.+...|.+||.++++.
T Consensus 60 rDltkrINELKnqLEdl 76 (562)
T 3ghg_A 60 QDFTNRINKLKNSLFEY 76 (562)
T ss_dssp HHHHHHHHHHHHHHTHH
T ss_pred CcHHHHHHHHHHHHHHH
Confidence 34666677777776544
No 37
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=79.54 E-value=16 Score=30.80 Aligned_cols=14 Identities=21% Similarity=0.164 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHHH
Q psy8840 336 KYTEELAKRINSME 349 (355)
Q Consensus 336 ~~~~~l~~~~~~~e 349 (355)
.+...|.+++..+|
T Consensus 118 ~e~r~L~Ekl~~lE 131 (168)
T 3o0z_A 118 GERKEAQDMLNHSE 131 (168)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34444444444444
No 38
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=76.39 E-value=15 Score=31.66 Aligned_cols=16 Identities=19% Similarity=0.370 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHhhc
Q psy8840 258 EYQEEIQRLKNLLNQR 273 (355)
Q Consensus 258 ~l~~ei~~Lk~~l~~~ 273 (355)
++..++..|+.+|...
T Consensus 21 ~~~q~~~~le~El~EF 36 (189)
T 2v71_A 21 KYKQSFQEARDELVEF 36 (189)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444555555555433
No 39
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=73.42 E-value=41 Score=32.67 Aligned_cols=10 Identities=0% Similarity=-0.190 Sum_probs=3.8
Q ss_pred HHHHHHHHHH
Q psy8840 295 EEDKLNNKRK 304 (355)
Q Consensus 295 ~~~~~~~~~~ 304 (355)
+..+.+.++.
T Consensus 422 ~~~~~~~~~~ 431 (487)
T 3oja_A 422 MYVEQQSVQN 431 (487)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 3333333333
No 40
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=73.26 E-value=21 Score=29.14 Aligned_cols=30 Identities=30% Similarity=0.368 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy8840 323 EVESKQKAIEAEKKYTEELAKRINSMESKL 352 (355)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~ 352 (355)
.++...++++..+++..+|++++..||..+
T Consensus 104 k~e~~~~e~~~l~~~~~~l~~~~~~le~~~ 133 (138)
T 3hnw_A 104 KAESSAKEIKELKSEINKYQKNIVKLETEL 133 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555555666666666666666543
No 41
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=72.84 E-value=34 Score=27.19 Aligned_cols=27 Identities=33% Similarity=0.454 Sum_probs=22.5
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHhhcc
Q psy8840 248 NEDPKEALLREYQEEIQRLKNLLNQRT 274 (355)
Q Consensus 248 n~~~~~~~~~~l~~ei~~Lk~~l~~~~ 274 (355)
..++.+.+|..|+.||..|+.++....
T Consensus 9 ~~d~rD~~Ie~Lkreie~lk~ele~l~ 35 (120)
T 3i00_A 9 NKDEKDHLIERLYREISGLKAQLENMK 35 (120)
T ss_dssp -CCTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457889999999999999999996543
No 42
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=72.71 E-value=26 Score=26.03 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy8840 318 QKLLQEVESKQKAIEAEKKYTEELAKRINSMES 350 (355)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~e~ 350 (355)
.++.+++....++|+......+.+.++|..|+.
T Consensus 47 kkl~~el~~h~~ei~~le~~i~rhk~~i~~l~~ 79 (84)
T 1gmj_A 47 KHKENEISHHAKEIERLQKEIERHKQSIKKLKQ 79 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 344566777777777777777777777777764
No 43
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=72.15 E-value=22 Score=28.46 Aligned_cols=24 Identities=29% Similarity=0.441 Sum_probs=16.4
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHh
Q psy8840 248 NEDPKEALLREYQEEIQRLKNLLN 271 (355)
Q Consensus 248 n~~~~~~~~~~l~~ei~~Lk~~l~ 271 (355)
+.......+..+..++..|+..+.
T Consensus 7 ~~~~~e~E~~~~~eel~~lke~l~ 30 (129)
T 2fxo_A 7 KSAEREKEMASMKEEFTRLKEALE 30 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHH
Confidence 333445667778888888887774
No 44
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=68.53 E-value=27 Score=28.41 Aligned_cols=34 Identities=26% Similarity=0.323 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy8840 319 KLLQEVESKQKAIEAEKKYTEELAKRINSMESKL 352 (355)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~ 352 (355)
.+..++...+..++..+++.++|.+++..++.++
T Consensus 93 ~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~ 126 (138)
T 3hnw_A 93 DLKHELIAAQIKAESSAKEIKELKSEINKYQKNI 126 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555666666666666666666554
No 45
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=67.92 E-value=8.9 Score=24.62 Aligned_cols=33 Identities=18% Similarity=0.380 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy8840 318 QKLLQEVESKQKAIEAEKKYTEELAKRINSMES 350 (355)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~e~ 350 (355)
..|++.++.--.++.+-.+...+|++|++.||.
T Consensus 5 ~~l~qkI~kVdrEI~Kte~kI~~lqkKlkeLee 37 (42)
T 2l5g_B 5 EELIQNMDRVDREITMVEQQISKLKKKQQQLEE 37 (42)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346666666667777777778888888888775
No 46
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=66.61 E-value=25 Score=33.47 Aligned_cols=17 Identities=18% Similarity=0.470 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHhhc
Q psy8840 257 REYQEEIQRLKNLLNQR 273 (355)
Q Consensus 257 ~~l~~ei~~Lk~~l~~~ 273 (355)
+.++..|..|+..|...
T Consensus 63 r~~~~rIe~L~~~L~~~ 79 (390)
T 1deq_A 63 QDFTSRINKLRDSLFNY 79 (390)
T ss_pred hhHHHHHHHHHHHHHHH
Confidence 34555566666655433
No 47
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=65.50 E-value=38 Score=36.96 Aligned_cols=8 Identities=25% Similarity=0.285 Sum_probs=3.5
Q ss_pred CceeEEEE
Q psy8840 114 RSHAIFII 121 (355)
Q Consensus 114 RSH~if~i 121 (355)
..|-|..|
T Consensus 655 ~phfVRCI 662 (1080)
T 2dfs_A 655 TPHYVRCI 662 (1080)
T ss_dssp EEEEEEEE
T ss_pred CCeeEEEe
Confidence 34544444
No 48
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=59.99 E-value=14 Score=44.75 Aligned_cols=16 Identities=13% Similarity=0.239 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHHhh
Q psy8840 257 REYQEEIQRLKNLLNQ 272 (355)
Q Consensus 257 ~~l~~ei~~Lk~~l~~ 272 (355)
..+++++..++.+|.+
T Consensus 1937 ~~l~~~L~~~~~~L~~ 1952 (3245)
T 3vkg_A 1937 KDLQVSLAQKNRELDV 1952 (3245)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444444444444443
No 49
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=57.18 E-value=86 Score=26.32 Aligned_cols=19 Identities=26% Similarity=0.216 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy8840 316 EKQKLLQEVESKQKAIEAE 334 (355)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~ 334 (355)
.+..|-+++-..+..++.+
T Consensus 63 ~k~~Leke~~~LQa~L~qE 81 (168)
T 3o0z_A 63 SKSQTDKDYYQLQAILEAE 81 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333
No 50
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=57.15 E-value=43 Score=24.84 Aligned_cols=43 Identities=28% Similarity=0.350 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8840 294 EEEDKLNNKRKRIMNENHLSDAEKQKLLQEVESKQKAIEAEKKYTEELAK 343 (355)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 343 (355)
.+.+++.++++.+.+ +-..-.++++..+++|++.++....|..
T Consensus 37 kekEqL~~LKkkl~~-------el~~h~~ei~~le~~i~rhk~~i~~l~~ 79 (84)
T 1gmj_A 37 RAKEQLAALKKHKEN-------EISHHAKEIERLQKEIERHKQSIKKLKQ 79 (84)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 355566665555532 2223344555555666665555555543
No 51
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=56.11 E-value=1.2e+02 Score=28.94 Aligned_cols=6 Identities=17% Similarity=0.722 Sum_probs=2.7
Q ss_pred Ecchhc
Q psy8840 48 YQEEIR 53 (355)
Q Consensus 48 yne~v~ 53 (355)
||..++
T Consensus 131 YNkdl~ 136 (471)
T 3mq9_A 131 YNKDLL 136 (471)
T ss_dssp EETTTC
T ss_pred EEhHHh
Confidence 454443
No 52
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=53.84 E-value=88 Score=34.34 Aligned_cols=37 Identities=22% Similarity=0.211 Sum_probs=22.2
Q ss_pred CCchHHHHHHHHHHhhhcCC---ceEEEEEEEEEEEcchh
Q psy8840 16 KGVIPNSFDQIFSHIARTEN---KQYLIRASYLEIYQEEI 52 (355)
Q Consensus 16 ~GIipra~~~lF~~i~~~~~---~~~~v~vS~~EIyne~v 52 (355)
++|+-|.|.+|-..|...=. .....+|..+.||.=++
T Consensus 431 k~lY~~lF~wlv~~iN~~l~~~~~~~~~~IgvLDi~GFE~ 470 (1184)
T 1i84_S 431 KAKFERLFRWILTRVNKALDKTKRQGASFLGILDIAGFEI 470 (1184)
T ss_dssp HHHHHHHHHHHHHHHTTTCC------CEEEEEEECCCCCC
T ss_pred HHHHHHHHHHHHHHHHHhhCCCccCCcceEEEeecCCcCC
Confidence 46777888888877765321 22345677788875433
No 53
>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1
Probab=52.48 E-value=30 Score=21.30 Aligned_cols=28 Identities=43% Similarity=0.542 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8840 316 EKQKLLQEVESKQKAIEAEKKYTEELAK 343 (355)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 343 (355)
+..+|-.+++++..+|.+.+++.++|.+
T Consensus 8 ENekLhk~ie~KdeeIa~Lk~eN~eL~E 35 (37)
T 1t6f_A 8 ENEKLHKEIEQKDNEIARLKKENKELAE 35 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHh
Confidence 4455667777777888887777777753
No 54
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=51.60 E-value=89 Score=24.80 Aligned_cols=15 Identities=27% Similarity=0.381 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHHHHH
Q psy8840 256 LREYQEEIQRLKNLL 270 (355)
Q Consensus 256 ~~~l~~ei~~Lk~~l 270 (355)
+.+++..|..|..++
T Consensus 40 i~elrr~iq~L~~el 54 (131)
T 3tnu_A 40 ISELRRTMQNLEIEL 54 (131)
T ss_dssp -CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 444555555555544
No 55
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=49.32 E-value=74 Score=23.22 Aligned_cols=39 Identities=23% Similarity=0.201 Sum_probs=21.1
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8840 313 SDAEKQKLLQEVESKQKAIEAEKKYTEELAKRINSMESK 351 (355)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~ 351 (355)
....+.+|...+.+...+-....+..+-|..|.+.|+.-
T Consensus 37 L~~G~~KL~~mi~~l~~E~~~l~~ni~~lk~K~~EL~~~ 75 (78)
T 3iv1_A 37 LKKGHQKLEEMVTRLDQEVAEVDKNIELLKKKDEELSSA 75 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444554444444444444445666777777777654
No 56
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=48.33 E-value=39 Score=22.71 Aligned_cols=28 Identities=18% Similarity=0.208 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8840 318 QKLLQEVESKQKAIEAEKKYTEELAKRI 345 (355)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 345 (355)
.+|..+++..+..++..+++.++|..++
T Consensus 22 eaLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 22 ELLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444444444
No 57
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=46.51 E-value=26 Score=23.62 Aligned_cols=31 Identities=19% Similarity=0.260 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy8840 323 EVESKQKAIEAEKKYTEELAKRINSMESKLL 353 (355)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~~ 353 (355)
+.+..+.++...+.+.++|.+++..+.+++.
T Consensus 20 d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~ 50 (53)
T 2yy0_A 20 EIELLRLELAEMKEKYEAIVEENKKLKAKLA 50 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444445555555555555555555555543
No 58
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=45.90 E-value=1.6e+02 Score=26.02 Aligned_cols=15 Identities=13% Similarity=0.392 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHHHHH
Q psy8840 256 LREYQEEIQRLKNLL 270 (355)
Q Consensus 256 ~~~l~~ei~~Lk~~l 270 (355)
+...+..+.+.+.++
T Consensus 69 i~~~~~ri~~~~~~l 83 (256)
T 3na7_A 69 LQDTNAKIASIQKKM 83 (256)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 334444444444444
No 59
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=45.76 E-value=2.3e+02 Score=27.86 Aligned_cols=18 Identities=33% Similarity=0.464 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy8840 254 ALLREYQEEIQRLKNLLN 271 (355)
Q Consensus 254 ~~~~~l~~ei~~Lk~~l~ 271 (355)
+-+..|+.|+++.++.-+
T Consensus 9 ~~la~yq~elarvqkana 26 (497)
T 3iox_A 9 AKLTAYQTELARVQKANA 26 (497)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 445667777777665543
No 60
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=43.59 E-value=1.2e+02 Score=23.87 Aligned_cols=27 Identities=19% Similarity=0.314 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8840 319 KLLQEVESKQKAIEAEKKYTEELAKRI 345 (355)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~~ 345 (355)
.|.+.|+....++++.+++.+.|..+|
T Consensus 82 ~Lnq~Lq~a~ae~erlr~~~~~~~~r~ 108 (121)
T 3mq7_A 82 TLNHKLQDASAEVERLRRENQVLSVRI 108 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhchhhhhHh
Confidence 344444444444444445555444444
No 61
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=43.54 E-value=1.7e+02 Score=28.02 Aligned_cols=18 Identities=39% Similarity=0.235 Sum_probs=10.4
Q ss_pred EecCCCCCCHHHHHHHHH
Q psy8840 216 ANIGPASYNYEESLTTLR 233 (355)
Q Consensus 216 ~~vsp~~~~~~eTlsTL~ 233 (355)
..|+....+-+....-|+
T Consensus 278 ~~I~~~sk~~eaA~~Fi~ 295 (471)
T 3mq9_A 278 AGINAASPNKELAKEFLE 295 (471)
T ss_dssp EEEBSSCSCHHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHH
Confidence 345555556666666664
No 62
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=43.15 E-value=1.3e+02 Score=36.86 Aligned_cols=9 Identities=22% Similarity=0.623 Sum_probs=5.0
Q ss_pred CceeEEEEE
Q psy8840 114 RSHAIFIIT 122 (355)
Q Consensus 114 RSH~if~i~ 122 (355)
.-|.||.+.
T Consensus 1777 NLHvVL~mS 1785 (3245)
T 3vkg_A 1777 NLHVVFTMN 1785 (3245)
T ss_dssp TCCEEEEEC
T ss_pred cCEEEEEEC
Confidence 346666553
No 63
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=41.60 E-value=1.3e+02 Score=23.75 Aligned_cols=18 Identities=28% Similarity=0.399 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy8840 254 ALLREYQEEIQRLKNLLN 271 (355)
Q Consensus 254 ~~~~~l~~ei~~Lk~~l~ 271 (355)
..+.+++..|..|..++.
T Consensus 36 ~Ei~elrr~iq~L~~el~ 53 (129)
T 3tnu_B 36 HEISEMNRMIQRLRAEID 53 (129)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 445566666666666654
No 64
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=41.02 E-value=2.5e+02 Score=26.92 Aligned_cols=26 Identities=15% Similarity=0.158 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy8840 327 KQKAIEAEKKYTEELAKRINSMESKL 352 (355)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~~~~~e~~~ 352 (355)
.+..+...+.....|..++..++.+.
T Consensus 110 l~~~~~~~~~~i~~l~~~i~~l~~~~ 135 (409)
T 1m1j_C 110 LTDMHIMNSNKITQLKQKIAQLESHC 135 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHh
Confidence 33334444556677777777777654
No 65
>3ljm_A Coil Ser L9C; de novo design, three stranded coiled coil, APO, de novo Pro; 1.36A {Synthetic} PDB: 2jgo_A 1cos_A 3h5g_A 3h5f_A 3pbj_A 2x6p_C 1coi_A
Probab=40.72 E-value=49 Score=18.99 Aligned_cols=13 Identities=23% Similarity=0.498 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHH
Q psy8840 337 YTEELAKRINSME 349 (355)
Q Consensus 337 ~~~~l~~~~~~~e 349 (355)
....|++++.++|
T Consensus 16 klqalekkleale 28 (31)
T 3ljm_A 16 KLQALEKKLEALE 28 (31)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3444555555555
No 66
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=40.59 E-value=1.3e+02 Score=23.47 Aligned_cols=21 Identities=29% Similarity=0.246 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcc
Q psy8840 254 ALLREYQEEIQRLKNLLNQRT 274 (355)
Q Consensus 254 ~~~~~l~~ei~~Lk~~l~~~~ 274 (355)
...+.|+..+.+|+.+++...
T Consensus 3 k~~rdL~~~~~~L~~E~e~~k 23 (111)
T 2v66_B 3 QRNRDLQADNQRLKYEVEALK 23 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHH
Confidence 345677788888887776544
No 67
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=40.57 E-value=2.1e+02 Score=27.93 Aligned_cols=18 Identities=17% Similarity=0.495 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHhhcc
Q psy8840 257 REYQEEIQRLKNLLNQRT 274 (355)
Q Consensus 257 ~~l~~ei~~Lk~~l~~~~ 274 (355)
+.+...|.+|+..|....
T Consensus 61 rdv~~rI~kLkn~L~~~s 78 (491)
T 1m1j_A 61 QNYSQRIDNIRQQLADSQ 78 (491)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHH
Confidence 456677778887776554
No 68
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=39.80 E-value=2.3e+02 Score=27.06 Aligned_cols=32 Identities=16% Similarity=0.190 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8840 315 AEKQKLLQEVESKQKAIEAEKKYTEELAKRIN 346 (355)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 346 (355)
++..+++++......++....++..++++++.
T Consensus 64 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (421)
T 1ses_A 64 EEKEALIARGKALGEEAKRLEEALREKEARLE 95 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555554444444444444444444443
No 69
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=39.75 E-value=1.1e+02 Score=29.91 Aligned_cols=16 Identities=25% Similarity=0.517 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHHhhh
Q psy8840 337 YTEELAKRINSMESKL 352 (355)
Q Consensus 337 ~~~~l~~~~~~~e~~~ 352 (355)
..+.|.++|..||.++
T Consensus 176 ~~~~l~~ki~~l~~~~ 191 (464)
T 1m1j_B 176 VIDSLHKKIQKLENAI 191 (464)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3445556666666544
No 70
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=38.80 E-value=42 Score=21.64 Aligned_cols=16 Identities=44% Similarity=0.715 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHhhh
Q psy8840 337 YTEELAKRINSMESKL 352 (355)
Q Consensus 337 ~~~~l~~~~~~~e~~~ 352 (355)
..++|++||..||.|+
T Consensus 17 r~e~LE~Ri~~LE~KL 32 (43)
T 2pnv_A 17 RSEDFEKRIVTLETKL 32 (43)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHH
Confidence 3455555666666655
No 71
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=38.13 E-value=1.1e+02 Score=22.11 Aligned_cols=24 Identities=25% Similarity=0.274 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q psy8840 327 KQKAIEAEKKYTEELAKRINSMES 350 (355)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~~~~~e~ 350 (355)
.+.++++-.+-...++.|+..+|.
T Consensus 49 l~~El~s~~~~~~r~~~ri~elEe 72 (77)
T 2w83_C 49 LQGELEAVKQAKLKLEEKNRELEE 72 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444555556666666654
No 72
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=37.40 E-value=81 Score=24.16 Aligned_cols=26 Identities=15% Similarity=0.139 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy8840 325 ESKQKAIEAEKKYTEELAKRINSMES 350 (355)
Q Consensus 325 ~~~~~~~~~~~~~~~~l~~~~~~~e~ 350 (355)
++.+.++++.+++.+.|..++..||.
T Consensus 71 ~~~~~~~e~Lq~E~erLr~~v~~lEe 96 (100)
T 1go4_E 71 QRLREDHSQLQAECERLRGLLRAMER 96 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44557777778889999999988875
No 73
>1aq5_A Matrilin-1, CMP, cartilage matrix protein; coiled-coil, heptad repeat, interchain disulfide bonds, oligomerization domain, trimer; NMR {Gallus gallus} SCOP: h.1.6.1
Probab=35.87 E-value=50 Score=21.72 Aligned_cols=22 Identities=32% Similarity=0.548 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc
Q psy8840 332 EAEKKYTEELAKRINSMESKLL 353 (355)
Q Consensus 332 ~~~~~~~~~l~~~~~~~e~~~~ 353 (355)
++..+..+++.+|+..||.+|+
T Consensus 26 ~~Lt~kL~~vt~rle~lEnrl~ 47 (47)
T 1aq5_A 26 NTLQQKLEAVAKRIEALENKII 47 (47)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhhcC
Confidence 3333446677788888888764
No 74
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=34.84 E-value=72 Score=19.45 Aligned_cols=26 Identities=15% Similarity=0.345 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8840 324 VESKQKAIEAEKKYTEELAKRINSME 349 (355)
Q Consensus 324 ~~~~~~~~~~~~~~~~~l~~~~~~~e 349 (355)
....+++++..++....|+..+..||
T Consensus 9 n~a~qqDIddlkrQN~~Le~Qir~le 34 (34)
T 1a93_B 9 NDTHQQDIDDLKRQNALLEQQVRALX 34 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred hHhhHhhHHHHHHHHHHHHHHHHhcC
Confidence 34455666666666667777766654
No 75
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=34.31 E-value=88 Score=22.70 Aligned_cols=33 Identities=9% Similarity=0.152 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8840 319 KLLQEVESKQKAIEAEKKYTEELAKRINSMESK 351 (355)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~ 351 (355)
.|.+.+-+++++|...+.....|.+|+..++..
T Consensus 32 eLn~~v~~Qq~~Id~L~~ql~~L~~rl~~~~~~ 64 (78)
T 3efg_A 32 ELSEALADARLTGARNAELIRHLLEDLGKVRST 64 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 455556666677777777777777777766643
No 76
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=33.76 E-value=58 Score=24.96 Aligned_cols=29 Identities=14% Similarity=0.212 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy8840 324 VESKQKAIEAEKKYTEELAKRINSMESKL 352 (355)
Q Consensus 324 ~~~~~~~~~~~~~~~~~l~~~~~~~e~~~ 352 (355)
+....++++....+...|.+++..||.+|
T Consensus 14 ~~~lr~ei~~Le~E~~rLr~~~~~LE~~L 42 (100)
T 1go4_E 14 ADTLRLKVEELEGERSRLEEEKRMLEAQL 42 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444555556666666666666655
No 77
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=33.23 E-value=1.6e+02 Score=22.53 Aligned_cols=34 Identities=24% Similarity=0.255 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy8840 319 KLLQEVESKQKAIEAEKKYTEELAKRINSMESKL 352 (355)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~ 352 (355)
.+..+...+.++++..+.....|...+..+...|
T Consensus 48 ql~Re~~eK~re~e~~Kr~~~~L~~~~~~lk~~L 81 (103)
T 4h22_A 48 ESRRQYEEKNKEFEREKHAHSILQFQFAEVKEAL 81 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555555555555555555555554443
No 78
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=30.19 E-value=97 Score=30.76 Aligned_cols=14 Identities=21% Similarity=0.344 Sum_probs=5.9
Q ss_pred HHHHHHHHHHHHhh
Q psy8840 338 TEELAKRINSMESK 351 (355)
Q Consensus 338 ~~~l~~~~~~~e~~ 351 (355)
-+.+++.|.++.++
T Consensus 178 Y~~~QKQLeQv~a~ 191 (562)
T 3ghg_A 178 YEDQQKQLEQVIAK 191 (562)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhc
Confidence 33444444444433
No 79
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=29.73 E-value=47 Score=18.47 Aligned_cols=15 Identities=33% Similarity=0.632 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHHhhh
Q psy8840 338 TEELAKRINSMESKL 352 (355)
Q Consensus 338 ~~~l~~~~~~~e~~~ 352 (355)
.+.|++++..+-.++
T Consensus 10 ledlqerlrklrkkl 24 (27)
T 3twe_A 10 LEDLQERLRKLRKKL 24 (27)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 344444444444444
No 80
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=29.12 E-value=1.3e+02 Score=21.49 Aligned_cols=12 Identities=8% Similarity=0.252 Sum_probs=5.2
Q ss_pred HHHHHHHHHHHH
Q psy8840 337 YTEELAKRINSM 348 (355)
Q Consensus 337 ~~~~l~~~~~~~ 348 (355)
+..+|...+..+
T Consensus 55 eI~~LqseLDKf 66 (72)
T 3nmd_A 55 LIQMLQNELDKY 66 (72)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 344444444433
No 81
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=27.88 E-value=2.1e+02 Score=22.19 Aligned_cols=13 Identities=31% Similarity=0.782 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHHh
Q psy8840 259 YQEEIQRLKNLLN 271 (355)
Q Consensus 259 l~~ei~~Lk~~l~ 271 (355)
|..+|..|+.++.
T Consensus 18 ye~~I~~LR~qid 30 (119)
T 3ol1_A 18 YEEEMRELRRQVD 30 (119)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4444444444443
No 82
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=27.87 E-value=1.2e+02 Score=19.34 Aligned_cols=11 Identities=36% Similarity=0.610 Sum_probs=4.8
Q ss_pred HHHHHHHHHHH
Q psy8840 323 EVESKQKAIEA 333 (355)
Q Consensus 323 ~~~~~~~~~~~ 333 (355)
+||.+.++++.
T Consensus 7 eLE~r~k~le~ 17 (42)
T 2oqq_A 7 ELENRVKDLEN 17 (42)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44444444443
No 83
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=27.16 E-value=1.5e+02 Score=28.33 Aligned_cols=32 Identities=6% Similarity=0.166 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy8840 321 LQEVESKQKAIEAEKKYTEELAKRINSMESKL 352 (355)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~ 352 (355)
..+++...+.+.++......|-+.++.|...|
T Consensus 30 ~~~~~~~~~~~~~~~~~rr~l~n~~~elkgnI 61 (403)
T 4etp_A 30 ELGMKELNEILIKEETVRRTLHNELQELRGNI 61 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 33444444555555566677777777776655
No 84
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=25.56 E-value=65 Score=21.80 Aligned_cols=37 Identities=19% Similarity=0.411 Sum_probs=16.8
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy8840 313 SDAEKQKLLQEVESKQKAIEAEKKYTEELAKRINSMESKL 352 (355)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~ 352 (355)
..++-...++++... ++...++..+|++++..++.+|
T Consensus 21 ~~~EVD~FLd~v~~~---~~~l~~e~~~L~~~~~~l~~~l 57 (57)
T 2wuj_A 21 DEDEVNEFLAQVRKD---YEIVLRKKTELEAKVNELDERI 57 (57)
T ss_dssp EHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHC-----
T ss_pred CHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhcC
Confidence 344444455544433 3333445666777777766654
No 85
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=25.22 E-value=2.5e+02 Score=30.65 Aligned_cols=19 Identities=32% Similarity=0.370 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q psy8840 253 EALLREYQEEIQRLKNLLN 271 (355)
Q Consensus 253 ~~~~~~l~~ei~~Lk~~l~ 271 (355)
...+.++++++..++..+.
T Consensus 856 ~~El~~L~~eL~el~~~L~ 874 (1184)
T 1i84_S 856 EEEMQAKDEELQRTKERQQ 874 (1184)
T ss_dssp HHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444455555555555443
No 86
>4dci_A Uncharacterized protein; PSI-biology, midwest center for structural genomics, MCSG, S genomics, unknown function; 2.82A {Synechococcus SP}
Probab=24.76 E-value=2.9e+02 Score=22.62 Aligned_cols=30 Identities=27% Similarity=0.175 Sum_probs=19.8
Q ss_pred cccccCCCchHHHHHHHHHHHHHHHHHHhh
Q psy8840 243 NQPRVNEDPKEALLREYQEEIQRLKNLLNQ 272 (355)
Q Consensus 243 n~~~~n~~~~~~~~~~l~~ei~~Lk~~l~~ 272 (355)
-+.++.+..++.+..+|+..+..+..+|.+
T Consensus 18 VK~iVTe~~Ke~l~~~l~~~i~q~d~elqQ 47 (150)
T 4dci_A 18 VRAVVTPTWKEEAEREISNGIANADQQLAQ 47 (150)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455556677777787777777776654
No 87
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=24.73 E-value=1.6e+02 Score=24.22 Aligned_cols=38 Identities=18% Similarity=0.227 Sum_probs=19.3
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8840 311 HLSDAEKQKLLQEVESKQKAIEAEKKYTEELAKRINSM 348 (355)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 348 (355)
...++|++.+++-|+...+.-..+.+....|.++|+.+
T Consensus 16 ~LteeEr~~Il~VL~Rd~~l~~~EeeRi~kLk~~l~~~ 53 (153)
T 2zet_C 16 TLTDEEAEHVWAVVQRDFDLRRREEERLQGLKGKIQKE 53 (153)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhHHHHHHhHHHHHHHHHHHHHHH
Confidence 34555665555555544433333444455555555554
No 88
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=24.17 E-value=5.1e+02 Score=25.35 Aligned_cols=28 Identities=11% Similarity=0.045 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8840 319 KLLQEVESKQKAIEAEKKYTEELAKRIN 346 (355)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 346 (355)
+++++......++....++..++++++.
T Consensus 120 ~l~~~~~~l~~~i~~l~~~~~~~~~~l~ 147 (501)
T 1wle_A 120 SLRARGREIRKQLTLLYPKEAQLEEQFY 147 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444444444444443
No 89
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=24.02 E-value=2e+02 Score=20.61 Aligned_cols=30 Identities=3% Similarity=0.239 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8840 320 LLQEVESKQKAIEAEKKYTEELAKRINSME 349 (355)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~e 349 (355)
|...++..+.+++...........++...|
T Consensus 46 L~kKiq~lE~eld~~ee~l~~a~~kLeeae 75 (81)
T 1ic2_A 46 LQKKLKGTEDELDKYSESLKDAQEKLELAD 75 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333334444443344444444444443
No 90
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=23.90 E-value=2.2e+02 Score=20.88 Aligned_cols=26 Identities=8% Similarity=0.196 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy8840 327 KQKAIEAEKKYTEELAKRINSMESKL 352 (355)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~~~~~e~~~ 352 (355)
+..++++.+.++..-+.||..|=+|+
T Consensus 53 L~~en~qLk~E~~~wq~Rl~~LLgk~ 78 (81)
T 2jee_A 53 LERENNHLKEQQNGWQERLQALLGRM 78 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44444555555555556665554443
No 91
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=23.85 E-value=5.6e+02 Score=25.65 Aligned_cols=15 Identities=13% Similarity=0.324 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHHh
Q psy8840 336 KYTEELAKRINSMES 350 (355)
Q Consensus 336 ~~~~~l~~~~~~~e~ 350 (355)
.+.+.|.+.|..|..
T Consensus 567 ~~~~~~~~ei~~l~~ 581 (592)
T 1f5n_A 567 KESRIMKNEIQDLQT 581 (592)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 455555566655554
No 92
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=23.22 E-value=1.7e+02 Score=22.09 Aligned_cols=27 Identities=19% Similarity=0.157 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8840 325 ESKQKAIEAEKKYTEELAKRINSMESK 351 (355)
Q Consensus 325 ~~~~~~~~~~~~~~~~l~~~~~~~e~~ 351 (355)
..-...|+..+.+...++.-+..+|++
T Consensus 65 ~e~~~kid~L~~el~K~q~~L~e~e~~ 91 (98)
T 2ke4_A 65 AETLSNIERLKLEVQKYEAWLAEAESR 91 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 333344444445555555555555544
No 93
>3tul_A Cell invasion protein SIPB; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.79A {Salmonella enterica subsp}
Probab=21.88 E-value=3.1e+02 Score=22.36 Aligned_cols=31 Identities=19% Similarity=0.284 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy8840 322 QEVESKQKAIEAEKKYTEELAKRINSMESKL 352 (355)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~ 352 (355)
+..++....+...++....|++|+...|.++
T Consensus 62 d~ye~ai~n~~sA~~~~d~lekKl~~aq~kL 92 (158)
T 3tul_A 62 DLYEASIKKTDTAKSVYDAATKKLTQAQNKL 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccchHHHHHHHHHHHHHHHHHHH
Confidence 3333334444444445555555555555544
No 94
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=21.77 E-value=1.7e+02 Score=27.94 Aligned_cols=32 Identities=13% Similarity=0.226 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy8840 321 LQEVESKQKAIEAEKKYTEELAKRINSMESKL 352 (355)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~ 352 (355)
.++++...+++.++..++..|-+.+..|...|
T Consensus 30 ~~~~~~~~~~l~~~~~~rr~l~n~~~~l~gnI 61 (412)
T 3u06_A 30 AAELETCKEQLFQSNMERKELHNTVMDLRDNI 61 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 34444444555555566777777887776654
No 95
>1t3u_A Conserved hypothetical protein; NYSGXRC, unknown ORF, COG3027, PSI, protein structure initiative; 2.50A {Pseudomonas aeruginosa PAO1} SCOP: d.244.1.1 PDB: 1w2e_A
Probab=21.67 E-value=2.5e+02 Score=20.89 Aligned_cols=31 Identities=16% Similarity=0.267 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccHHHHHHH
Q psy8840 290 EYLNEEEDKLNNKRKRIMNENHLSDAEKQKL 320 (355)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (355)
+++.+.-..++.....+.........++..+
T Consensus 26 e~l~~aA~~vd~~~~~i~~~~~~~~~~r~~v 56 (104)
T 1t3u_A 26 ANLESAARYLDGKMREIRSSGKVIGADRVAV 56 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCSCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 3444444444555555554444444444443
No 96
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=21.43 E-value=3.9e+02 Score=22.92 Aligned_cols=22 Identities=14% Similarity=0.288 Sum_probs=12.2
Q ss_pred ccHHHHHHHHHHHHHHHHHHHH
Q psy8840 312 LSDAEKQKLLQEVESKQKAIEA 333 (355)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~ 333 (355)
...+++.++.+.+.....-+..
T Consensus 169 l~~~~k~~i~~~l~~~~~~L~~ 190 (219)
T 4e81_A 169 LPADDKTAIESALTALETALKG 190 (219)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHHHhc
Confidence 3456666666555555554443
No 97
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=20.51 E-value=1e+02 Score=20.03 Aligned_cols=19 Identities=37% Similarity=0.635 Sum_probs=13.1
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q psy8840 252 KEALLREYQEEIQRLKNLL 270 (355)
Q Consensus 252 ~~~~~~~l~~ei~~Lk~~l 270 (355)
+..++.++++|++.+|.++
T Consensus 13 KqEIL~E~RkElqK~K~EI 31 (45)
T 1use_A 13 KQELLEEVKKELQKVKEEI 31 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3456777777777777665
No 98
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=20.32 E-value=4.9e+02 Score=24.65 Aligned_cols=19 Identities=5% Similarity=0.319 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy8840 289 EEYLNEEEDKLNNKRKRIM 307 (355)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~ 307 (355)
.++..+++.++..+++.+.
T Consensus 112 ~e~s~eLe~~i~~lk~~V~ 130 (390)
T 1deq_A 112 KQINEDLRSRIEILRRKVI 130 (390)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444445555554444444
Done!