BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8842
(225 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P46871|KRP95_STRPU Kinesin-II 95 kDa subunit OS=Strongylocentrotus purpuratus GN=KRP95
PE=1 SV=1
Length = 742
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 149/242 (61%), Gaps = 23/242 (9%)
Query: 3 EMKQELDKKEESTEEIRGNYSTLEQEVQAKNKKLQKIYSKYEEVKQDIQDIMDEFNRDRR 62
+M+++L ++++ T EI G +S+L+QEV+ K KKL+K+++K + K DIQD+ DE R+R+
Sbjct: 505 DMERKLKEQDDKTVEIEGTFSSLQQEVEVKTKKLKKLFAKLQSYKSDIQDLQDEHARERQ 564
Query: 63 DLEQSQDELLKDLKLRKLIIENFIPIEELKRLEQRLVYDEESSQWNIVP---ETNPFYIQ 119
+LEQ+Q+EL+++LKL+K+I +NFIP+EE ++ R V+DEE+ +W + P P +
Sbjct: 565 ELEQTQNELIRELKLKKVIADNFIPVEERTKITTRAVFDEETEEWLLTPLAKAEGPSQMA 624
Query: 120 KRLVASPQLRRPTTLKAREKISQCPTDAGKTRFIGENILTLNFDICPNNCKNYQGPKVAP 179
KR V++ RRP AR G R+ ENIL+++ D+ ++Y+GP VAP
Sbjct: 625 KRPVSAVGNRRPIADYAR----MAAQMGGNPRYKAENILSVDLDMPNRTTRDYEGPSVAP 680
Query: 180 SILSVLQAALQDEADIDVDVK-----------STASKKIHRANKTP-----LYPKPRGLV 223
+ + L AALQDE D+D++V+ + H+A P LYP+ RGL+
Sbjct: 681 RVQAALDAALQDEDDLDLEVQPEVFKAKTKLKKDKVRSKHKAVAKPGSNSQLYPQARGLI 740
Query: 224 PK 225
K
Sbjct: 741 QK 742
>sp|O15066|KIF3B_HUMAN Kinesin-like protein KIF3B OS=Homo sapiens GN=KIF3B PE=1 SV=1
Length = 747
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 149/244 (61%), Gaps = 25/244 (10%)
Query: 3 EMKQELDKKEESTEEIRGNYSTLEQEVQAKNKKLQKIYSKYEEVKQDIQDIMDEFNRDRR 62
E++Q+++ ++E T E++ YS+L+QEV K KKL+K++SK + VK +I D+ +E ++R+
Sbjct: 508 EIQQQMESRDEETLELKETYSSLQQEVDIKTKKLKKLFSKLQAVKAEIHDLQEEHIKERQ 567
Query: 63 DLEQSQDELLKDLKLRKLIIENFIPIEELKRLEQRLVYDEESSQWNIVPETN--PFYIQK 120
+LEQ+Q+EL ++LKL+ LIIENFIP+EE ++ R +DEE W + P T + K
Sbjct: 568 ELEQTQNELTRELKLKHLIIENFIPLEEKSKIMNRAFFDEEEDHWKLHPITRLENQQMMK 627
Query: 121 RLVASPQLRRPTTLKAREKISQCPTDAGKTRFIGENILTLNFDICPNNCKNYQGPKVAPS 180
R V++ +RP + AR + P + R+ ENI+ L D+ ++Y+GP +AP
Sbjct: 628 RPVSAVGYKRPLSQHARMSMMIRP----EARYRAENIVLLELDMPSRTTRDYEGPAIAPK 683
Query: 181 ILSVLQAALQDEADIDVDV---KSTASKK-------------IHRANKTP---LYPKPRG 221
+ + L AALQDE +I VD +STA+KK ++ TP LYP+ RG
Sbjct: 684 VQAALDAALQDEDEIQVDASSFESTANKKSKARPKSGRKSGSSSSSSGTPASQLYPQSRG 743
Query: 222 LVPK 225
LVPK
Sbjct: 744 LVPK 747
>sp|Q61771|KIF3B_MOUSE Kinesin-like protein KIF3B OS=Mus musculus GN=Kif3b PE=1 SV=1
Length = 747
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 141/244 (57%), Gaps = 25/244 (10%)
Query: 3 EMKQELDKKEESTEEIRGNYSTLEQEVQAKNKKLQKIYSKYEEVKQDIQDIMDEFNRDRR 62
E++Q+++ ++E T E++ Y++L+QEV K KKL+K++SK + VK +I D+ +E ++R+
Sbjct: 508 EIQQQMESRDEETLELKETYTSLQQEVDIKTKKLKKLFSKLQAVKAEIHDLQEEHIKERQ 567
Query: 63 DLEQSQDELLKDLKLRKLIIENFIPIEELKRLEQRLVYDEESSQWNIVPETN--PFYIQK 120
+LEQ+Q+EL ++LKL+ LIIENFIP+EE ++ R +D+E W + P T + K
Sbjct: 568 ELEQTQNELTRELKLKHLIIENFIPLEEKNKIMNRSFFDDEEDHWKLHPITRLENQQMMK 627
Query: 121 RLVASPQLRRPTTLKAREKISQCPTDAGKTRFIGENILTLNFDICPNNCKNYQGPKVAPS 180
R V++ +RP + AR + P + R+ ENI+ L D+ ++Y+GP ++P
Sbjct: 628 RPVSAVGYKRPLSQHARMSMMIRP----EPRYRAENIMLLELDMPSRTTRDYEGPAISPK 683
Query: 181 ILSVLQAALQDEADIDVDVKSTASKKIHRANKTP-------------------LYPKPRG 221
+ + L AALQDE +I VD S S + P YP+ RG
Sbjct: 684 VQAALDAALQDEDEIQVDASSFESTASRKPKARPKSGRKSGSSSSSSGNPASQFYPQSRG 743
Query: 222 LVPK 225
LVPK
Sbjct: 744 LVPK 747
>sp|P46867|KLP68_DROME Kinesin-like protein Klp68D OS=Drosophila melanogaster GN=Klp68D
PE=2 SV=2
Length = 784
Score = 130 bits (328), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 125/206 (60%), Gaps = 12/206 (5%)
Query: 2 IEMKQELDKKEESTEEIRGNYSTLEQEVQAKNKKLQKIYSKYEEVKQDIQDIMDEFNRDR 61
IE++Q+L+ +EE+T EIR +LEQEV+ K +KL K Y+KY ++Q++ D + N+D
Sbjct: 499 IEIQQQLELQEETTLEIRERNVSLEQEVELKKRKLSKCYAKYLALQQELNDCKSDHNQDL 558
Query: 62 RDLEQSQDELLKDLKLRKLIIENFIPIEELKRLEQRLVYDEESSQWNIV-------PETN 114
R+LE +Q+EL+K+LK + LII+NF+PIE +RL + YDEE +W P +
Sbjct: 559 RELEMAQNELVKELKRQLLIIDNFVPIEVKQRLYTQAKYDEEQEEWKFSSMSLPTPPGGD 618
Query: 115 PFYIQKRLVASPQLRRPTTLKA-REKISQCPTDAGKTRFIGENILTLNFDICPNNCKNYQ 173
+ KR V+ PQ RRPT+ A +E S P+ RF ENI+ ++ + Y+
Sbjct: 619 GKFSSKRPVSHPQRRRPTSEYALQEAKSNSPSS---LRFKSENIVNYELEMPCRTTQEYR 675
Query: 174 GPKVAPSILSVLQAALQDEADIDVDV 199
PKV+ S+ +VL A+Q D D+D+
Sbjct: 676 TPKVSASLQAVLAQAMQTGGD-DIDI 700
>sp|Q29DY1|KLP68_DROPS Kinesin-like protein Klp68D OS=Drosophila pseudoobscura
pseudoobscura GN=Klp68D PE=3 SV=1
Length = 797
Score = 127 bits (319), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 127/207 (61%), Gaps = 13/207 (6%)
Query: 2 IEMKQELDKKEESTEEIRGNYSTLEQEVQAKNKKLQKIYSKYEEVKQDIQDIMDEFNRDR 61
IE++Q+L+ +EE+T EIR +LEQEV+ K +KL K Y+KY ++Q++ D + N+D
Sbjct: 502 IEIQQQLELQEETTLEIRERNVSLEQEVELKKRKLSKCYAKYLALQQELNDCKHDHNQDL 561
Query: 62 RDLEQSQDELLKDLKLRKLIIENFIPIEELKRLEQRLVYDEESSQWNI------VPETNP 115
R+LE +Q+EL+K+LK + LII+NF+PIE +RL + YDEE +W +P +
Sbjct: 562 RELEMAQNELVKELKRQLLIIDNFVPIEVKQRLYTQAKYDEEQEEWKFSSFPLPLPPSGG 621
Query: 116 FYIQ--KRLVASPQLRRPTTLKA-REKISQCPTDAGKTRFIGENILTLNFDICPNNCKNY 172
Q +R V+ PQ RRPT+ A +E S P+ RF ENI++ ++ + Y
Sbjct: 622 DGRQGYRRPVSHPQRRRPTSEHALQEAKSNAPSS---LRFKSENIVSYELEMPCRTTQEY 678
Query: 173 QGPKVAPSILSVLQAALQDEADIDVDV 199
+ PKV+ S+ +VL A+Q D D+D+
Sbjct: 679 RTPKVSASLQAVLAQAMQTGGD-DIDI 704
>sp|A0JN40|KIF3C_BOVIN Kinesin-like protein KIF3C OS=Bos taurus GN=KIF3C PE=2 SV=1
Length = 792
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 104/168 (61%), Gaps = 8/168 (4%)
Query: 3 EMKQELDKKEESTEEIRGNYSTLEQEVQAKNKKLQKIYSKYEEVKQDIQDIMDEFNRDRR 62
EM+QE+ ++E T E+RG Y++L+QEV+ K KKL+K+Y+K + VK +IQD DE+ R R+
Sbjct: 553 EMQQEMMLRDEETMELRGTYTSLQQEVEVKTKKLKKLYAKLQAVKAEIQDQHDEYIRVRQ 612
Query: 63 DLEQSQDELLKDLKLRKLIIENFIPIEELKRLEQRLVYDEESSQWNIVP----ETNPFYI 118
DLE++Q+E ++LKL+ LIIENFIP EE ++ RL D E QW P N +
Sbjct: 613 DLEEAQNEQTRELKLKYLIIENFIPPEEKNKIMNRLFLDCEEEQWKFQPLVPSGANSSQM 672
Query: 119 QKRLVASPQLRRPTTLKAREKISQCPTDAGKTRFIGENILTLNFDICP 166
+KR ++ +RP + AR ++ R+ ENI+ L D+ P
Sbjct: 673 KKRPTSAVGYKRPISQYARVAMAM----GSHPRYRAENIMFLELDVSP 716
>sp|Q5R706|KIF3C_PONAB Kinesin-like protein KIF3C OS=Pongo abelii GN=KIF3C PE=2 SV=1
Length = 793
Score = 103 bits (258), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 105/167 (62%), Gaps = 7/167 (4%)
Query: 3 EMKQELDKKEESTEEIRGNYSTLEQEVQAKNKKLQKIYSKYEEVKQDIQDIMDEFNRDRR 62
EM+QE+ ++E T E+RG Y++L+QEV+ K KKL+K+Y+K + VK +IQD DE+ R R+
Sbjct: 556 EMQQEMMLRDEETMELRGTYTSLQQEVEVKTKKLKKLYAKLQAVKAEIQDQHDEYIRVRQ 615
Query: 63 DLEQSQDELLKDLKLRKLIIENFIPIEELKRLEQRLVYDEESSQWN---IVPETNPFYIQ 119
DLE++Q+E ++LKL+ LIIENFIP EE ++ RL D E QW +VP ++
Sbjct: 616 DLEEAQNEQTRELKLKYLIIENFIPPEEKNKIMNRLFLDCEEEQWKFQPLVPAGVNSQMK 675
Query: 120 KRLVASPQLRRPTTLKAREKISQCPTDAGKTRFIGENILTLNFDICP 166
KR ++ +RP + AR ++ R+ ENI+ L D+ P
Sbjct: 676 KRPTSAVGYKRPISQYARVAMAM----GSHPRYRAENIMFLELDVSP 718
>sp|O35066|KIF3C_MOUSE Kinesin-like protein KIF3C OS=Mus musculus GN=Kif3c PE=2 SV=3
Length = 796
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 104/168 (61%), Gaps = 8/168 (4%)
Query: 3 EMKQELDKKEESTEEIRGNYSTLEQEVQAKNKKLQKIYSKYEEVKQDIQDIMDEFNRDRR 62
EM+QE+ ++E T E+RG YS+L+QEV+ K KKL+K+Y+K + VK +IQD +E+ R R+
Sbjct: 557 EMQQEMLLRDEETMELRGTYSSLQQEVEVKTKKLKKLYAKLQAVKAEIQDQHEEYIRVRQ 616
Query: 63 DLEQSQDELLKDLKLRKLIIENFIPIEELKRLEQRLVYDEESSQWNIVP----ETNPFYI 118
DLE++Q+E ++LKL+ LIIENFIP EE ++ RL D E QW P N +
Sbjct: 617 DLEEAQNEQTRELKLKYLIIENFIPPEEKNKIMNRLFLDCEEEQWRFQPLVPAGVNNSQM 676
Query: 119 QKRLVASPQLRRPTTLKAREKISQCPTDAGKTRFIGENILTLNFDICP 166
+KR ++ +RP + AR ++ R+ ENI+ L D+ P
Sbjct: 677 KKRPTSAVGYKRPISQYARVAMAM----GSHPRYRAENIMFLELDVSP 720
>sp|O55165|KIF3C_RAT Kinesin-like protein KIF3C OS=Rattus norvegicus GN=Kif3c PE=2 SV=1
Length = 796
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 104/168 (61%), Gaps = 8/168 (4%)
Query: 3 EMKQELDKKEESTEEIRGNYSTLEQEVQAKNKKLQKIYSKYEEVKQDIQDIMDEFNRDRR 62
EM+QE+ ++E T E+RG YS+L+QEV+ K KKL+K+Y+K + VK +IQD +E+ R R+
Sbjct: 557 EMQQEMLLRDEETMELRGTYSSLQQEVEVKTKKLKKLYAKLQAVKAEIQDQHEEYIRVRQ 616
Query: 63 DLEQSQDELLKDLKLRKLIIENFIPIEELKRLEQRLVYDEESSQWNIVP----ETNPFYI 118
DLE++Q+E ++LKL+ LIIENFIP EE ++ RL D E QW P N +
Sbjct: 617 DLEEAQNEQTRELKLKYLIIENFIPPEEKNKIMNRLFLDCEEEQWKFQPLVPAGVNNSQM 676
Query: 119 QKRLVASPQLRRPTTLKAREKISQCPTDAGKTRFIGENILTLNFDICP 166
+KR ++ +RP + AR ++ R+ ENI+ L D+ P
Sbjct: 677 KKRPTSAVGYKRPISQYARVAMAM----GSHPRYRAENIMFLELDVSP 720
>sp|O14782|KIF3C_HUMAN Kinesin-like protein KIF3C OS=Homo sapiens GN=KIF3C PE=1 SV=3
Length = 793
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 104/168 (61%), Gaps = 8/168 (4%)
Query: 3 EMKQELDKKEESTEEIRGNYSTLEQEVQAKNKKLQKIYSKYEEVKQDIQDIMDEFNRDRR 62
EM+QE+ ++E T E+RG Y++L+QEV+ K KKL+K+Y+K + VK +IQD DE+ R R+
Sbjct: 555 EMQQEMMLRDEETMELRGTYTSLQQEVEVKTKKLKKLYAKLQAVKAEIQDQHDEYIRVRQ 614
Query: 63 DLEQSQDELLKDLKLRKLIIENFIPIEELKRLEQRLVYDEESSQWNIVP----ETNPFYI 118
DLE++Q+E ++LKL+ LIIENFIP EE ++ RL D E QW P + +
Sbjct: 615 DLEEAQNEQTRELKLKYLIIENFIPPEEKNKIMNRLFLDCEEEQWKFQPLVPAGVSSSQM 674
Query: 119 QKRLVASPQLRRPTTLKAREKISQCPTDAGKTRFIGENILTLNFDICP 166
+KR ++ +RP + AR ++ R+ ENI+ L D+ P
Sbjct: 675 KKRPTSAVGYKRPISQYARVAMAM----GSHPRYRAENIMFLELDVSP 718
>sp|Q9Y496|KIF3A_HUMAN Kinesin-like protein KIF3A OS=Homo sapiens GN=KIF3A PE=1 SV=4
Length = 699
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 69/107 (64%)
Query: 3 EMKQELDKKEESTEEIRGNYSTLEQEVQAKNKKLQKIYSKYEEVKQDIQDIMDEFNRDRR 62
++++EL++KE+ +I Y++L++E Q K KKL+K+++ K ++ D+ E R+
Sbjct: 513 QLRRELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHQREIE 572
Query: 63 DLEQSQDELLKDLKLRKLIIENFIPIEELKRLEQRLVYDEESSQWNI 109
L ++ +L ++L+L+ LII+NFIP + + +E + ++E+ +W +
Sbjct: 573 GLLENIRQLSRELRLQMLIIDNFIPRDYQEMIENYVHWNEDIGEWQL 619
>sp|Q4R628|KIF3A_MACFA Kinesin-like protein KIF3A OS=Macaca fascicularis GN=KIF3A PE=2
SV=1
Length = 702
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 69/107 (64%)
Query: 3 EMKQELDKKEESTEEIRGNYSTLEQEVQAKNKKLQKIYSKYEEVKQDIQDIMDEFNRDRR 62
++++EL++KE+ +I Y++L++E Q K KKL+K+++ K ++ D+ E R+
Sbjct: 516 QLRRELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHQREIE 575
Query: 63 DLEQSQDELLKDLKLRKLIIENFIPIEELKRLEQRLVYDEESSQWNI 109
L ++ +L ++L+L+ LII+NFIP + + +E + ++E+ +W +
Sbjct: 576 GLLENIRQLSRELRLQMLIIDNFIPRDYQEMIENYVHWNEDIGEWQL 622
>sp|P46872|KRP85_STRPU Kinesin-II 85 kDa subunit OS=Strongylocentrotus purpuratus GN=KRP85
PE=1 SV=1
Length = 699
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 66/106 (62%)
Query: 4 MKQELDKKEESTEEIRGNYSTLEQEVQAKNKKLQKIYSKYEEVKQDIQDIMDEFNRDRRD 63
M++ ++++E+ +I YS+L+ E K KKL+K+++ + K ++ D+ E R+
Sbjct: 512 MRKMMEEREQERMDIEEKYSSLQDEAHGKTKKLKKVWTMLMQAKSEVADMQAEHQREMEA 571
Query: 64 LEQSQDELLKDLKLRKLIIENFIPIEELKRLEQRLVYDEESSQWNI 109
L ++ EL ++L+L LII++FIP E + +EQ + ++E+ +W +
Sbjct: 572 LLENVRELSRELRLSMLIIDSFIPQEFQEMIEQYVHWNEDIGEWQL 617
>sp|P28741|KIF3A_MOUSE Kinesin-like protein KIF3A OS=Mus musculus GN=Kif3a PE=1 SV=2
Length = 701
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 66/104 (63%)
Query: 6 QELDKKEESTEEIRGNYSTLEQEVQAKNKKLQKIYSKYEEVKQDIQDIMDEFNRDRRDLE 65
+EL++KE+ +I Y++L++E Q K KKL+K+++ K ++ D+ E R+ L
Sbjct: 518 KELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHQREIEGLL 577
Query: 66 QSQDELLKDLKLRKLIIENFIPIEELKRLEQRLVYDEESSQWNI 109
++ +L ++L+L+ LII+NFIP + + +E + ++E+ +W +
Sbjct: 578 ENIRQLSRELRLQMLIIDNFIPQDYQEMIENYVHWNEDIGEWQL 621
>sp|Q5R4H3|KIF3A_PONAB Kinesin-like protein KIF3A OS=Pongo abelii GN=KIF3A PE=2 SV=1
Length = 702
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 68/107 (63%)
Query: 3 EMKQELDKKEESTEEIRGNYSTLEQEVQAKNKKLQKIYSKYEEVKQDIQDIMDEFNRDRR 62
++++EL++KE+ +I Y++L++E Q K KKL+K+++ K ++ D+ E +
Sbjct: 516 QLRRELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHQGEIE 575
Query: 63 DLEQSQDELLKDLKLRKLIIENFIPIEELKRLEQRLVYDEESSQWNI 109
L ++ +L ++L+L+ LII+NFIP + + +E + ++E+ +W +
Sbjct: 576 GLLENIRQLSRELRLQMLIIDNFIPRDYQEMIENYVHWNEDIGEWQL 622
>sp|P46869|FLA10_CHLRE Kinesin-like protein FLA10 OS=Chlamydomonas reinhardtii GN=FLA10
PE=1 SV=1
Length = 786
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 64/107 (59%)
Query: 3 EMKQELDKKEESTEEIRGNYSTLEQEVQAKNKKLQKIYSKYEEVKQDIQDIMDEFNRDRR 62
E K+ L++ + + + +++L++E+ K+++L+K++ KY+ K ++ D+ ++F R+R
Sbjct: 546 EAKRRLEELQAAQVDADAKFASLDEEINVKSRQLKKLFEKYQGKKGELADLQEQFQRERE 605
Query: 63 DLEQSQDELLKDLKLRKLIIENFIPIEELKRLEQRLVYDEESSQWNI 109
+ + L + +KL+ LII FIP + ++ Q + + S WNI
Sbjct: 606 GMLEDYRILTQQIKLKNLIIACFIPPDYQDKIMQHCHWQDYDSSWNI 652
>sp|P46873|OSM3_CAEEL Osmotic avoidance abnormal protein 3 OS=Caenorhabditis elegans
GN=osm-3 PE=2 SV=4
Length = 699
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 16/114 (14%)
Query: 22 YSTLEQEVQAKNKKLQKIYSKYEEVKQDIQDIMDEFNRDRRDLEQSQDELLKDLKLRKLI 81
YST ++++ A +L+K K + +++I+D+ EF DR D + + + LKL I
Sbjct: 487 YSTTQEKLDAVTSQLEKEVKKSKGYEREIEDLHGEFELDRLDYLDTIRKQDQQLKLLMQI 546
Query: 82 IENFIPI-------EELKRLEQRLVYDEESSQW---------NIVPETNPFYIQ 119
++ PI + R+++ V++E+ S+W I+P N Y+Q
Sbjct: 547 MDKIQPIIKKDTNYSNVDRIKKEAVWNEDESRWILPEMSMSRTILPLANNGYMQ 600
>sp|Q8WXE1|ATRIP_HUMAN ATR-interacting protein OS=Homo sapiens GN=ATRIP PE=1 SV=1
Length = 791
Score = 35.0 bits (79), Expect = 0.40, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 7 ELDKKEESTEEIRGNYSTLEQEVQAKNKKLQKIYSKYEEVKQDIQDIMDEFNRDRRDLEQ 66
EL+ + +E++ +E+EV KN +++ + + + +++E R LEQ
Sbjct: 113 ELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQT----ESVLEEQRRSHFLLEQ 168
Query: 67 SQDELLKD------LKLRKLIIENFIPIEELKRLEQRLVYDEESSQW------NIVPETN 114
+ + L D KL+ L E E+ L +L E +++ ++ P N
Sbjct: 169 EKTQALSDKEKEFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAPSVSHVSPRKN 228
Query: 115 PFYIQKRLVASPQLRRPTTLKAREKISQ-------CPTDAGKTRFIG 154
P + K SPQ + T+ +E S C T++G +G
Sbjct: 229 PSVVIKPEACSPQFGK-TSFPTKESFSANMSLPHPCQTESGYKPLVG 274
>sp|Q99PW8|KIF17_MOUSE Kinesin-like protein KIF17 OS=Mus musculus GN=Kif17 PE=1 SV=1
Length = 1038
Score = 35.0 bits (79), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 17/172 (9%)
Query: 22 YSTLEQEVQAKNKKLQKIYSKYEEVKQDIQDIMDEFNRDRRDLEQSQDELLKDLKLRKLI 81
Y ++++EV+AK+K L+K+ K + +I+D+ EF ++ D + +D L + +
Sbjct: 810 YDSIQEEVRAKSKLLEKMQRKLRAAEVEIKDLQSEFQLEKIDYLATIRRQERDSMLFQQL 869
Query: 82 IENFIPI-------EELKRLEQRLVYDEESSQWNIVPETNPFYIQKRLVASPQLRRPTTL 134
+E P+ L+++ + +DE++ W I +P ++ L P + T
Sbjct: 870 LEQVQPLIRRDCNYSNLEKIRRESSWDEDNGFWKI---PDPIILKTSL---PVVPTGTQN 923
Query: 135 KAREKISQCPTDAGKTRFIGEN--ILTLNFDICPNNCKNYQGPKVAPSILSV 184
K K S D+G+ E+ L L+ N NY K A ILS
Sbjct: 924 KPARKTSAV--DSGEPHMQEEDRYKLMLSRSDSENIASNYFRSKRASQILST 973
>sp|Q6E2N3|TRI33_DANRE E3 ubiquitin-protein ligase TRIM33 OS=Danio rerio GN=trim33 PE=2
SV=1
Length = 1163
Score = 33.9 bits (76), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Query: 16 EEIRGNYSTLEQEVQAKNKKLQKIYSKYE-EVKQDIQDIMDEFNRDRRDLEQSQDELLKD 74
+E RG EVQ + K++ + + K E E+K + +++E N+ + L Q + + KD
Sbjct: 335 QEKRGLVEYSASEVQKRLKEVAETHKKVEHEIKIAVFTLINEINKKGKSLLQQLESVTKD 394
Query: 75 LKLRKLIIENFIPIEELKRLEQRLVYDEESSQWNIVPETNPFYIQKRLVASPQLRRPTTL 134
++ L + I + L Q++++ + W I ++ + + + + QLR L
Sbjct: 395 RSMKLLSQQRDISV-----LAQQIIHVLNFTNWAITNGSSTALLYSKRLITYQLR----L 445
Query: 135 KAREKISQCPTDAGKTRFI 153
+ ++ P G RF
Sbjct: 446 IMKARVDAVPPANGAVRFF 464
>sp|Q6NRG0|RNF8B_XENLA E3 ubiquitin-protein ligase RNF8-B OS=Xenopus laevis GN=rnf8-b PE=2
SV=1
Length = 532
Score = 31.6 bits (70), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
Query: 3 EMKQELDKKEESTEEIRGNYSTLEQEVQAKNKKLQ-------KIYSKYEEVKQDIQDIMD 55
++ Q L + + +E+ N + EQ +QAKNK+LQ K+ ++ EEV + D++D
Sbjct: 313 QLAQALQEHTQLMQELNRNKNDFEQIIQAKNKELQETKEEKEKVCAQKEEVLNHMNDVLD 372
>sp|Q69ZB0|LRCC1_MOUSE Leucine-rich repeat and coiled-coil domain-containing protein 1
OS=Mus musculus GN=Lrrcc1 PE=2 SV=2
Length = 1026
Score = 31.6 bits (70), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 4 MKQELDKKEESTEEIRGNYSTLEQEVQAKNKKLQKIYSKYEEVKQDIQD 52
+KQ+L KE EEIR YSTL ++ K + L + + +EVK+ +D
Sbjct: 876 LKQQLKAKELELEEIRKAYSTLNKKWHDKGELLSHLEMQVKEVKEKFED 924
>sp|P41003|SMC2_SCHPO Structural maintenance of chromosomes protein 2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cut14 PE=1 SV=2
Length = 1172
Score = 31.2 bits (69), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 2 IEMKQ-ELDKKEESTEEIRGNYSTLEQEVQAKNKKLQKIYSKYEEVKQDIQDIMDEFNRD 60
IE+K L+++ ++IRG LE ++ K K+L ++ S YE+ K + Q I +F
Sbjct: 318 IELKNTALEEEHGDLQQIRGKAKELETLLRGKRKRLDEVLSVYEKRKDEHQSISKDF--- 374
Query: 61 RRDLEQSQDELLKDL 75
+SQ+EL+ L
Sbjct: 375 -----KSQEELISSL 384
>sp|Q9Y6A5|TACC3_HUMAN Transforming acidic coiled-coil-containing protein 3 OS=Homo
sapiens GN=TACC3 PE=1 SV=1
Length = 838
Score = 30.8 bits (68), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 18/99 (18%)
Query: 5 KQELDKKEESTEEIRGNYSTLEQEVQAKNKKLQKIYSKYEEV---------------KQD 49
+++LD ++T+E + +E+ KN +L KI ++EEV K +
Sbjct: 641 QKDLDAVVKATQEENRELRSRCEELHGKNLELGKIMDRFEEVVYQAMEEVQKQKELSKAE 700
Query: 50 IQDIM---DEFNRDRRDLEQSQDELLKDLKLRKLIIENF 85
IQ ++ D+ D +E+S +L K + +K +IE +
Sbjct: 701 IQKVLKEKDQLTTDLNSMEKSFSDLFKRFEKQKEVIEGY 739
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.132 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,153,162
Number of Sequences: 539616
Number of extensions: 3569999
Number of successful extensions: 21286
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 698
Number of HSP's that attempted gapping in prelim test: 18194
Number of HSP's gapped (non-prelim): 3648
length of query: 225
length of database: 191,569,459
effective HSP length: 113
effective length of query: 112
effective length of database: 130,592,851
effective search space: 14626399312
effective search space used: 14626399312
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)