BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8843
(76 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q29DY1|KLP68_DROPS Kinesin-like protein Klp68D OS=Drosophila pseudoobscura
pseudoobscura GN=Klp68D PE=3 SV=1
Length = 797
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 36/49 (73%)
Query: 14 RPEYKKKKTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISN 62
RP +T NE VQVVVRCRPM++ E S G +VV+++PNRGV+E+ N
Sbjct: 7 RPGTASSQTPNECVQVVVRCRPMSNRERSEGSPEVVNVYPNRGVVELQN 55
>sp|P46871|KRP95_STRPU Kinesin-II 95 kDa subunit OS=Strongylocentrotus purpuratus
GN=KRP95 PE=1 SV=1
Length = 742
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 21 KTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPK 64
K E+V+VVVRCRPMNS EIS G+ ++V+M RG++E++NPK
Sbjct: 3 KKSAETVKVVVRCRPMNSKEISQGHKRIVEMDNKRGLVEVTNPK 46
>sp|P46867|KLP68_DROME Kinesin-like protein Klp68D OS=Drosophila melanogaster GN=Klp68D
PE=2 SV=2
Length = 784
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 14 RPEYKKKKTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISN 62
RP +T NE VQVVVRCRPM++ E S +VV+++PNRGV+E+ N
Sbjct: 7 RPGTGSSQTPNECVQVVVRCRPMSNRERSERSPEVVNVYPNRGVVELQN 55
>sp|O15066|KIF3B_HUMAN Kinesin-like protein KIF3B OS=Homo sapiens GN=KIF3B PE=1 SV=1
Length = 747
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 24 NESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPK 64
+ESV+VVVRCRPMN E + YDKVVD+ G + + NPK
Sbjct: 7 SESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPK 47
>sp|Q61771|KIF3B_MOUSE Kinesin-like protein KIF3B OS=Mus musculus GN=Kif3b PE=1 SV=1
Length = 747
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 24 NESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPK 64
+ESV+VVVRCRPMN E + YDKVVD+ G + + NPK
Sbjct: 7 SESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPK 47
>sp|P46872|KRP85_STRPU Kinesin-II 85 kDa subunit OS=Strongylocentrotus purpuratus
GN=KRP85 PE=1 SV=1
Length = 699
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 24 NESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNP 63
N++V+VVVRCRP+NS E G+ VV M RG ++++NP
Sbjct: 8 NDNVRVVVRCRPLNSKETGQGFKSVVKMDEMRGTVQVTNP 47
>sp|P46869|FLA10_CHLRE Kinesin-like protein FLA10 OS=Chlamydomonas reinhardtii GN=FLA10
PE=1 SV=1
Length = 786
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 24 NESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKV 65
+ESV+VVVRCRP+N E + G ++VDM + G +++ NPK
Sbjct: 8 SESVKVVVRCRPLNGKEKADGRSRIVDMDVDAGQVKVRNPKA 49
>sp|Q5R706|KIF3C_PONAB Kinesin-like protein KIF3C OS=Pongo abelii GN=KIF3C PE=2 SV=1
Length = 793
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 20 KKTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKV 65
K +E+++VV RCRP++ E + G+++++ M G + + NP+
Sbjct: 4 KTKASEALKVVARCRPLSRKEEAAGHEQILTMDVKLGQVTLRNPRA 49
>sp|O55165|KIF3C_RAT Kinesin-like protein KIF3C OS=Rattus norvegicus GN=Kif3c PE=2
SV=1
Length = 796
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 20 KKTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKV 65
K +E+++VV RCRP++ E + G+++++ M G + + NP+
Sbjct: 4 KTKASEALKVVARCRPLSRKEEAAGHEQILTMDVKLGQVTLRNPRA 49
>sp|O14782|KIF3C_HUMAN Kinesin-like protein KIF3C OS=Homo sapiens GN=KIF3C PE=1 SV=3
Length = 793
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 20 KKTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKV 65
K +E+++VV RCRP++ E + G+++++ M G + + NP+
Sbjct: 4 KTKASEALKVVARCRPLSRKEEAAGHEQILTMDVKLGQVTLRNPRA 49
>sp|O35066|KIF3C_MOUSE Kinesin-like protein KIF3C OS=Mus musculus GN=Kif3c PE=2 SV=3
Length = 796
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 20 KKTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKV 65
K +E+++VV RCRP++ E + G+++++ M G + + NP+
Sbjct: 4 KTKASEALKVVARCRPLSRKEEAAGHEQILTMDVKLGQVTLRNPRA 49
>sp|A0JN40|KIF3C_BOVIN Kinesin-like protein KIF3C OS=Bos taurus GN=KIF3C PE=2 SV=1
Length = 792
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 20 KKTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKV 65
K +E+++VV RCRP++ E + G+++++ M G + + NP+
Sbjct: 4 KTKASEALKVVARCRPLSRKEEAAGHEQILTMDVKLGQVTLRNPRA 49
>sp|Q99PW8|KIF17_MOUSE Kinesin-like protein KIF17 OS=Mus musculus GN=Kif17 PE=1 SV=1
Length = 1038
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 26/52 (50%)
Query: 24 NESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKVKEKKIKDLNI 75
+ESV+VVVRCRPMN E VV + RG I NP ++ K
Sbjct: 3 SESVKVVVRCRPMNKRERELSCQSVVTVDSARGQCFIQNPGAADEPPKQFTF 54
>sp|P46873|OSM3_CAEEL Osmotic avoidance abnormal protein 3 OS=Caenorhabditis elegans
GN=osm-3 PE=2 SV=4
Length = 699
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 25 ESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNP 63
ESV+V VRCRP N E V M PN G + ++ P
Sbjct: 3 ESVRVAVRCRPFNQREKDLNTTLCVGMTPNVGQVNLNAP 41
>sp|P52732|KIF11_HUMAN Kinesin-like protein KIF11 OS=Homo sapiens GN=KIF11 PE=1 SV=2
Length = 1056
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 18 KKKKTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKVKEK 68
KKK+ + +++QVVVRCRP N +E +V+ P R + + + +K
Sbjct: 10 KKKEEKGKNIQVVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTGGLADK 60
>sp|Q4R628|KIF3A_MACFA Kinesin-like protein KIF3A OS=Macaca fascicularis GN=KIF3A PE=2
SV=1
Length = 702
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 25 ESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEI 60
++V+VVVRCRP+N E S Y + V + RG I +
Sbjct: 13 DNVKVVVRCRPLNEREKSMCYKQAVSVDEMRGTITV 48
>sp|Q5R4H3|KIF3A_PONAB Kinesin-like protein KIF3A OS=Pongo abelii GN=KIF3A PE=2 SV=1
Length = 702
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 25 ESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEI 60
++V+VVVRCRP+N E S Y + V + RG I +
Sbjct: 13 DNVKVVVRCRPLNEREKSMCYKQAVSVDEMRGTITV 48
>sp|Q9Y496|KIF3A_HUMAN Kinesin-like protein KIF3A OS=Homo sapiens GN=KIF3A PE=1 SV=4
Length = 699
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 25 ESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEI 60
++V+VVVRCRP+N E S Y + V + RG I +
Sbjct: 13 DNVKVVVRCRPLNEREKSMCYKQAVSVDEMRGTITV 48
>sp|P28741|KIF3A_MOUSE Kinesin-like protein KIF3A OS=Mus musculus GN=Kif3a PE=1 SV=2
Length = 701
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 25 ESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEI 60
++V+VVVRCRP+N E S Y + V + RG I +
Sbjct: 13 DNVKVVVRCRPLNEREKSMCYRQAVSVDEMRGTITV 48
>sp|Q6P9P6|KIF11_MOUSE Kinesin-like protein KIF11 OS=Mus musculus GN=Kif11 PE=2 SV=1
Length = 1052
Score = 32.3 bits (72), Expect = 1.0, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 18 KKKKTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKVKEKKIK 71
KKK+ + ++QVVVRCRP N +E VV+ R + + + +K K
Sbjct: 9 KKKEEKGRNIQVVVRCRPFNLAERKANAHSVVECDHARKEVSVRTAGLTDKTSK 62
>sp|Q9P2E2|KIF17_HUMAN Kinesin-like protein KIF17 OS=Homo sapiens GN=KIF17 PE=2 SV=3
Length = 1029
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 25/52 (48%)
Query: 24 NESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKVKEKKIKDLNI 75
+E+V+VVVRCRPMN E VV + R I NP ++ K
Sbjct: 3 SEAVKVVVRCRPMNQRERELRCQPVVTVDCARAQCCIQNPGAADEPPKQFTF 54
>sp|Q17BU3|KIF1A_AEDAE Kinesin-like protein unc-104 OS=Aedes aegypti GN=unc-104 PE=3
SV=1
Length = 1644
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 26 SVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKV 65
SV+V VR RP NS EIS +++M N I+NPKV
Sbjct: 3 SVKVAVRVRPFNSREISRESKCIIEMSGNTTC--ITNPKV 40
>sp|P28025|KI11B_XENLA Kinesin-like protein KIF11-B OS=Xenopus laevis GN=kif11-b PE=1
SV=2
Length = 1067
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 19 KKKTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKVKEK 68
KK+ + +++QVVVRCRP N E V++ R + + +V +K
Sbjct: 11 KKEDKGKNIQVVVRCRPFNQLERKASSHSVLECDSQRKEVYVRTGEVNDK 60
>sp|Q91783|KI11A_XENLA Kinesin-like protein KIF11-A OS=Xenopus laevis GN=kif11-a PE=1
SV=1
Length = 1067
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 19 KKKTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKVKEK 68
KK + +++QVVVRCRP N E V++ R + + +V +K
Sbjct: 11 KKDDKGKNIQVVVRCRPFNQLERKASSHSVLECESQRKEVCVRTGEVNDK 60
>sp|P33174|KIF4_MOUSE Chromosome-associated kinesin KIF4 OS=Mus musculus GN=Kif4 PE=2
SV=3
Length = 1231
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 27 VQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPK 64
V+V +RCRP+ S EI G + P + + N K
Sbjct: 10 VRVALRCRPLVSKEIKEGCQTCLSFVPGEPQVVVGNDK 47
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.131 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,576,531
Number of Sequences: 539616
Number of extensions: 975687
Number of successful extensions: 2726
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2696
Number of HSP's gapped (non-prelim): 35
length of query: 76
length of database: 191,569,459
effective HSP length: 47
effective length of query: 29
effective length of database: 166,207,507
effective search space: 4820017703
effective search space used: 4820017703
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)