Query psy8843
Match_columns 76
No_of_seqs 104 out of 682
Neff 6.1
Searched_HMMs 29240
Date Fri Aug 16 20:34:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8843.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8843hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b6u_A Kinesin-like protein KI 98.8 9.7E-09 3.3E-13 75.6 6.1 58 19-76 15-73 (372)
2 2zfi_A Kinesin-like protein KI 98.8 1.1E-08 3.7E-13 75.0 6.1 51 24-76 3-53 (366)
3 2vvg_A Kinesin-2; motor protei 98.7 7.4E-09 2.5E-13 75.6 4.3 53 24-76 3-61 (350)
4 2owm_A Nckin3-434, related to 98.7 1.2E-08 4.1E-13 76.5 5.1 56 21-76 34-101 (443)
5 1x88_A Kinesin-like protein KI 98.7 8.1E-09 2.8E-13 75.5 2.6 58 19-76 2-60 (359)
6 3gbj_A KIF13B protein; kinesin 98.6 3.9E-08 1.3E-12 71.8 4.6 50 25-76 1-56 (354)
7 3lre_A Kinesin-like protein KI 98.6 3.8E-08 1.3E-12 71.8 4.4 42 21-64 6-47 (355)
8 1v8k_A Kinesin-like protein KI 98.5 1.5E-07 5.2E-12 70.1 4.8 53 22-75 68-125 (410)
9 2heh_A KIF2C protein; kinesin, 98.5 1.3E-07 4.5E-12 70.0 4.3 54 21-75 47-105 (387)
10 1goj_A Kinesin, kinesin heavy 98.4 2.7E-07 9.1E-12 67.4 5.7 51 21-76 2-52 (355)
11 4a14_A Kinesin, kinesin-like p 98.4 2.1E-07 7.1E-12 67.6 4.5 47 22-75 8-54 (344)
12 2wbe_C Bipolar kinesin KRP-130 98.4 3E-07 1E-11 67.5 4.7 56 19-76 17-72 (373)
13 1ry6_A Internal kinesin; kines 98.3 2.7E-07 9.3E-12 67.5 2.7 49 26-75 1-54 (360)
14 1bg2_A Kinesin; motor protein, 98.3 6.6E-07 2.2E-11 64.6 3.9 46 21-75 3-48 (325)
15 3bfn_A Kinesin-like protein KI 98.2 6.6E-07 2.3E-11 66.2 3.1 56 18-75 14-69 (388)
16 1t5c_A CENP-E protein, centrom 98.2 7.3E-07 2.5E-11 65.0 3.3 47 23-75 2-48 (349)
17 2y65_A Kinesin, kinesin heavy 98.2 1.2E-06 4.2E-11 64.1 4.1 48 20-75 6-55 (365)
18 3cob_A Kinesin heavy chain-lik 98.0 2.4E-06 8.4E-11 62.7 3.3 50 22-75 2-51 (369)
19 2rep_A Kinesin-like protein KI 98.0 2.3E-06 7.7E-11 63.0 2.7 26 21-46 18-43 (376)
20 3t0q_A AGR253WP; kinesin, alph 97.9 7.3E-06 2.5E-10 59.6 3.9 52 24-76 4-58 (349)
21 2h58_A Kinesin-like protein KI 97.9 7.8E-06 2.7E-10 59.1 3.4 48 24-75 3-52 (330)
22 3u06_A Protein claret segregat 97.8 4.6E-05 1.6E-09 56.6 6.9 54 21-76 55-111 (412)
23 3dc4_A Kinesin-like protein NO 97.8 1.9E-05 6.5E-10 57.4 4.4 46 21-75 18-65 (344)
24 3nwn_A Kinesin-like protein KI 97.8 3.6E-05 1.2E-09 56.2 5.5 49 22-75 21-76 (359)
25 1f9v_A Kinesin-like protein KA 97.6 4E-05 1.4E-09 55.7 3.6 50 24-76 2-57 (347)
26 2nr8_A Kinesin-like protein KI 97.6 0.00011 3.8E-09 53.6 5.4 49 22-75 20-75 (358)
27 4etp_A Kinesin-like protein KA 97.2 0.00036 1.2E-08 51.5 4.4 55 21-76 55-113 (403)
28 4h1g_A Maltose binding protein 94.4 0.023 7.8E-07 44.0 2.8 56 21-76 370-435 (715)
29 2o0a_A S.cerevisiae chromosome 85.9 0.65 2.2E-05 33.4 3.3 42 21-75 20-61 (298)
30 2jtd_A Myomesin-1, skelemin; i 25.7 61 0.0021 20.8 2.9 40 36-75 74-113 (142)
No 1
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=98.78 E-value=9.7e-09 Score=75.60 Aligned_cols=58 Identities=41% Similarity=0.583 Sum_probs=44.5
Q ss_pred hccCCCCceEEEEeeCCCCchhhcCCCeeEEEEeCCCCeEEEeCCCCC-CCCCeeeEeC
Q psy8843 19 KKKTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKVK-EKKIKDLNIL 76 (76)
Q Consensus 19 ~~~~~~~~VrV~VR~RPln~rE~~~g~~~vV~~~~~~~~v~v~~p~~~-~~~~KtFtF~ 76 (76)
...+..++|+|+|||||++.+|...+...+|.++.+..++.+.+|... ....++|+|.
T Consensus 15 ~~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~F~FD 73 (372)
T 3b6u_A 15 YFQGSSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTAHEMPKTFTFD 73 (372)
T ss_dssp ------CBCEEEEEECCCCHHHHHTTCCBCEEEETTTTEEEECCTTCTTTCCCEEEECS
T ss_pred ccCCCCCCeEEEEEcCCCChhhhccCCceEEEEeCCCCEEEEECCCCCCCCCceEEEcC
Confidence 345667899999999999999999999999999877788999888642 3457899983
No 2
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=98.77 E-value=1.1e-08 Score=75.01 Aligned_cols=51 Identities=33% Similarity=0.440 Sum_probs=41.7
Q ss_pred CCceEEEEeeCCCCchhhcCCCeeEEEEeCCCCeEEEeCCCCCCCCCeeeEeC
Q psy8843 24 NESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKVKEKKIKDLNIL 76 (76)
Q Consensus 24 ~~~VrV~VR~RPln~rE~~~g~~~vV~~~~~~~~v~v~~p~~~~~~~KtFtF~ 76 (76)
..+|+|+|||||++.+|...+..++|.++. ..+.+.+|.......++|+|.
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~--~~~~i~~~~~~~~~~~~f~FD 53 (366)
T 2zfi_A 3 GASVKVAVRVRPFNSREMSRDSKCIIQMSG--STTTIVNPKQPKETPKSFSFD 53 (366)
T ss_dssp -CCEEEEEEECCCCHHHHHTTCCBCEEEET--TEEEECCTTCTTSCCEEEECS
T ss_pred CCCcEEEEECCCCChhhccCCCCeEEEECC--CcEEEeccCCCCCCceEEecc
Confidence 578999999999999999999999999984 567777776554567899983
No 3
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=98.74 E-value=7.4e-09 Score=75.60 Aligned_cols=53 Identities=21% Similarity=0.424 Sum_probs=39.5
Q ss_pred CCceEEEEeeCCCCchhhcCCCeeEEEEeCCCCeEEEeCCCC------CCCCCeeeEeC
Q psy8843 24 NESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKV------KEKKIKDLNIL 76 (76)
Q Consensus 24 ~~~VrV~VR~RPln~rE~~~g~~~vV~~~~~~~~v~v~~p~~------~~~~~KtFtF~ 76 (76)
.++|+|+|||||++.+|...+...+|.++.+..++.+..|.. .....++|+|.
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~~~~~~f~FD 61 (350)
T 2vvg_A 3 SDNIKVIVRCRPLNARETRENALNIIRMDEASAQVIVDPPEQEKSATQAKKVPRTFTFD 61 (350)
T ss_dssp -CBCEEEEEECCCCHHHHHTTCCBCEEEEGGGTEEEECC--------------EEEECS
T ss_pred CCCeEEEEEeCCCChhhhccCCceEEEEcCCCCEEEEeeccccccccccCCCceEeeCC
Confidence 579999999999999999999999999987677888887753 12356889883
No 4
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=98.72 E-value=1.2e-08 Score=76.50 Aligned_cols=56 Identities=23% Similarity=0.311 Sum_probs=43.6
Q ss_pred cCCCCceEEEEeeCCCCchhhcCCCeeEEEEeCCCCeEEEeCCCCCC------------CCCeeeEeC
Q psy8843 21 KTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKVKE------------KKIKDLNIL 76 (76)
Q Consensus 21 ~~~~~~VrV~VR~RPln~rE~~~g~~~vV~~~~~~~~v~v~~p~~~~------------~~~KtFtF~ 76 (76)
.+..++|+|+|||||++.+|...+..++|.++.....+++..|.... ...++|+|.
T Consensus 34 ~~~~~~vrV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~F~FD 101 (443)
T 2owm_A 34 KDPGANVRVVVRVRAFLPRELERNAECIVEMDPATERTSLLVPQETDFADARGARSRRVLEEKSFTFD 101 (443)
T ss_dssp CCCCEECEEEEEEECCCHHHHHTTCCCCEEECSSSCEEEECCCC---------------CCCEEEECS
T ss_pred CCCCCCeEEEEEeCCCChHHhhcCCceEEEEcCCCccEEEecCCCcccccccccccccccCCceEecC
Confidence 45567999999999999999999999999998776777777664211 136889983
No 5
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=98.66 E-value=8.1e-09 Score=75.48 Aligned_cols=58 Identities=28% Similarity=0.444 Sum_probs=40.3
Q ss_pred hccCCCCceEEEEeeCCCCchhhcCCCeeEEEEeCCCCeEEEeCCCC-CCCCCeeeEeC
Q psy8843 19 KKKTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKV-KEKKIKDLNIL 76 (76)
Q Consensus 19 ~~~~~~~~VrV~VR~RPln~rE~~~g~~~vV~~~~~~~~v~v~~p~~-~~~~~KtFtF~ 76 (76)
++++..++|+|+|||||++.+|...+...+|.+++...++.+..+.. .....++|+|.
T Consensus 2 ~~~~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~f~FD 60 (359)
T 1x88_A 2 KKEEKGKNIQVVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTGGLADKSSRKTYTFD 60 (359)
T ss_dssp -------CCEEEEEECCCCHHHHHTTCCCCEEEETTTTEEEEEEEEETTEEEEEEEECS
T ss_pred CCCCCCCCeEEEEEeCCCChhhhhcCCceEEEEcCCCcEEEEeCCCccCCcCceEEece
Confidence 45667789999999999999999999999999987777777764321 12245789883
No 6
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9
Probab=98.60 E-value=3.9e-08 Score=71.76 Aligned_cols=50 Identities=26% Similarity=0.225 Sum_probs=36.7
Q ss_pred CceEEEEeeCCCCchhhcCCCeeEEEEeCCCCeEEEeCCCC------CCCCCeeeEeC
Q psy8843 25 ESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKV------KEKKIKDLNIL 76 (76)
Q Consensus 25 ~~VrV~VR~RPln~rE~~~g~~~vV~~~~~~~~v~v~~p~~------~~~~~KtFtF~ 76 (76)
.+|+|+|||||++.+|...+..++|.++. ..+.+..+.. ....+|+|+|.
T Consensus 1 S~VkV~vRvRPl~~~E~~~~~~~vv~~~~--~~~~~~~~~~~~~~~~~~~~~k~F~FD 56 (354)
T 3gbj_A 1 SKVKVAVRIRPMNRRETDLHTKCVVDVDA--NKVILNPVNTNLSKGDARGQPKVFAYD 56 (354)
T ss_dssp -CEEEEEEECCCCHHHHHHTCCBCEEEET--TEEEECCC-----------CCEEEECS
T ss_pred CCcEEEEECCCCChhhhccCCceEEEeCC--CeEEEeCCccccccccccCCceEEEee
Confidence 47999999999999999999999999984 4566655431 22357899983
No 7
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=98.59 E-value=3.8e-08 Score=71.82 Aligned_cols=42 Identities=36% Similarity=0.533 Sum_probs=28.5
Q ss_pred cCCCCceEEEEeeCCCCchhhcCCCeeEEEEeCCCCeEEEeCCC
Q psy8843 21 KTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPK 64 (76)
Q Consensus 21 ~~~~~~VrV~VR~RPln~rE~~~g~~~vV~~~~~~~~v~v~~p~ 64 (76)
++...+|+|+|||||++.+|...|...+|.+.+ ..+.+.+|.
T Consensus 6 ~d~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~--~~~~~~d~~ 47 (355)
T 3lre_A 6 EDLCHHMKVVVRVRPENTKEKAAGFHKVVHVVD--KHILVFDPK 47 (355)
T ss_dssp ------CEEEEEECCCCHHHHHTTCCBSEEECS--SSEEEEC--
T ss_pred hhccCCCEEEEEeCcCChHHHhcCCceEEEecC--CceEEecCC
Confidence 455689999999999999999999999999874 334444443
No 8
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*
Probab=98.46 E-value=1.5e-07 Score=70.11 Aligned_cols=53 Identities=21% Similarity=0.351 Sum_probs=40.0
Q ss_pred CCCCceEEEEeeCCCCchhhcCCCeeEEEEeCCCCeEEEeCCCCCCC-----CCeeeEe
Q psy8843 22 TQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKVKEK-----KIKDLNI 75 (76)
Q Consensus 22 ~~~~~VrV~VR~RPln~rE~~~g~~~vV~~~~~~~~v~v~~p~~~~~-----~~KtFtF 75 (76)
....+|+|+|||||++.+|...+...+|.+.+ ...+.++.|..... ..++|+|
T Consensus 68 ~~~~~I~V~vRvRPl~~~E~~~~~~~~v~~~~-~~~v~v~~~~~~~~~~~~~~~~~F~F 125 (410)
T 1v8k_A 68 IEEHRICVCVRKRPLNKQELAKKEIDVISVPS-KCLLLVHEPKLKVDLTKYLENQAFCF 125 (410)
T ss_dssp TSCCCEEEEEEECCCCHHHHHTTCCBCEECCS-SSEEEEEEEEECTTCCEEEEEEEEEC
T ss_pred CCCCCeEEEEEeCCCChhHhhcCCccEEEECC-CCEEEEecCcccccccccccceEEee
Confidence 34689999999999999999999888888864 45677776543211 2468888
No 9
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*
Probab=98.46 E-value=1.3e-07 Score=69.98 Aligned_cols=54 Identities=20% Similarity=0.346 Sum_probs=40.2
Q ss_pred cCCCCceEEEEeeCCCCchhhcCCCeeEEEEeCCCCeEEEeCCCCCCC-----CCeeeEe
Q psy8843 21 KTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKVKEK-----KIKDLNI 75 (76)
Q Consensus 21 ~~~~~~VrV~VR~RPln~rE~~~g~~~vV~~~~~~~~v~v~~p~~~~~-----~~KtFtF 75 (76)
.....+|+|+|||||++.+|...+...+|.+.. ..++.++.|....+ ..++|+|
T Consensus 47 ~~~~~~I~V~vRvRP~~~~E~~~~~~~~v~~~~-~~~~~v~~~~~~~~~~~~~~~~~F~F 105 (387)
T 2heh_A 47 PIEEHRICVCVRKRPLNKQELAKKEIDVISIPS-KCLLLVHEPKLKVDLTKYLENQAFCF 105 (387)
T ss_dssp CCCCCSEEEEEEECCCCHHHHHTTCCBCEECCB-SSEEEEEEEEECTTCCEEEEEEEEEC
T ss_pred CCCCCCeEEEEECCCCChHHhccCCceEEEECC-CCEEEEeCCCccccccccccccEEee
Confidence 334789999999999999999999888888864 45677776543211 2468888
No 10
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=98.45 E-value=2.7e-07 Score=67.41 Aligned_cols=51 Identities=22% Similarity=0.318 Sum_probs=39.0
Q ss_pred cCCCCceEEEEeeCCCCchhhcCCCeeEEEEeCCCCeEEEeCCCCCCCCCeeeEeC
Q psy8843 21 KTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKVKEKKIKDLNIL 76 (76)
Q Consensus 21 ~~~~~~VrV~VR~RPln~rE~~~g~~~vV~~~~~~~~v~v~~p~~~~~~~KtFtF~ 76 (76)
+...++|+|+|||||++.+|...|...+|.+..+ ..+.+... ...++|+|.
T Consensus 2 s~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~-~~~~~~~~----~~~~~f~FD 52 (355)
T 1goj_A 2 SSSANSIKVVARFRPQNRVEIESGGQPIVTFQGP-DTCTVDSK----EAQGSFTFD 52 (355)
T ss_dssp CCSSCBCEEEEEECCCCHHHHTTTCCBCEEECST-TEEEECST----TCCEEEECS
T ss_pred CCCCCCeEEEEECCCCChHHhhcCCceEEEEcCC-CeEEEccC----CCccEEeeC
Confidence 4557899999999999999999999999998754 34444332 236889883
No 11
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*
Probab=98.42 E-value=2.1e-07 Score=67.57 Aligned_cols=47 Identities=19% Similarity=0.437 Sum_probs=37.6
Q ss_pred CCCCceEEEEeeCCCCchhhcCCCeeEEEEeCCCCeEEEeCCCCCCCCCeeeEe
Q psy8843 22 TQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKVKEKKIKDLNI 75 (76)
Q Consensus 22 ~~~~~VrV~VR~RPln~rE~~~g~~~vV~~~~~~~~v~v~~p~~~~~~~KtFtF 75 (76)
.+..+|+|+|||||++.+|...+...||.++++...+.+. ..+.|+|
T Consensus 8 ~~~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~-------~~~~f~F 54 (344)
T 4a14_A 8 AEEAPVRVALRVRPLLPKELLHGHQSCLQVEPGLGRVTLG-------RDRHFGF 54 (344)
T ss_dssp -CCCCCEEEEEECCCCHHHHHTTCCBCEEEEGGGTEEEET-------TTEEEEC
T ss_pred ccccceEEEEEecccchHHHhccCeeEEEEcCCCceEEec-------ccceEEE
Confidence 3568999999999999999999988888888766666653 2577887
No 12
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}
Probab=98.39 E-value=3e-07 Score=67.54 Aligned_cols=56 Identities=29% Similarity=0.290 Sum_probs=41.0
Q ss_pred hccCCCCceEEEEeeCCCCchhhcCCCeeEEEEeCCCCeEEEeCCCCCCCCCeeeEeC
Q psy8843 19 KKKTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKVKEKKIKDLNIL 76 (76)
Q Consensus 19 ~~~~~~~~VrV~VR~RPln~rE~~~g~~~vV~~~~~~~~v~v~~p~~~~~~~KtFtF~ 76 (76)
...+..++|+|+|||||++.+|...+...+|.+... ..+.+..+.. ....+.|+|.
T Consensus 17 ~~~~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~-~~~~~~~~~~-~~~~~~F~FD 72 (373)
T 2wbe_C 17 PQKKSNQNIQVYVRVRPLNSRERCIRSAEVVDVVGP-REVVTRHTLD-SKLTKKFTFD 72 (373)
T ss_dssp -CCCCCEECEEEEEECCCCHHHHHHTCCBCEEEETT-TEEEESSSSS-STTCEEEECS
T ss_pred CCcCCCCCeEEEEEcCCCChhhhccCCCceEEEcCC-CeEEEecCCC-CCCceEEecc
Confidence 345567899999999999999998888888888753 4555554432 2356899983
No 13
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9
Probab=98.29 E-value=2.7e-07 Score=67.53 Aligned_cols=49 Identities=20% Similarity=0.321 Sum_probs=36.9
Q ss_pred ceEEEEeeCCCCchhhcCCCeeEEEEeCCCCeEEEeCCCCCC-----CCCeeeEe
Q psy8843 26 SVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKVKE-----KKIKDLNI 75 (76)
Q Consensus 26 ~VrV~VR~RPln~rE~~~g~~~vV~~~~~~~~v~v~~p~~~~-----~~~KtFtF 75 (76)
+|+|+|||||++.+|...+...+|.+.+ ..++.+..|.... ...++|+|
T Consensus 1 ~IrV~vRvRP~~~~E~~~~~~~~v~~~~-~~~i~i~~~~~~~~~~~~~~~~~F~F 54 (360)
T 1ry6_A 1 MIKVVVRKRPLSELEKKKKDSDIITVKN-NCTLYIDEPRYKVDMTKYIERHEFIV 54 (360)
T ss_dssp CEEEEEEECCCCHHHHHTTCCBCEEEEE-TTEEEEEEEEEETTTEEEEEEEEEEC
T ss_pred CeEEEEECCCCChHHhccCCceEEEECC-CCEEEEeCCccccccccccccceEEe
Confidence 6999999999999999999888888865 3567776653211 12467887
No 14
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A*
Probab=98.25 E-value=6.6e-07 Score=64.61 Aligned_cols=46 Identities=22% Similarity=0.372 Sum_probs=35.8
Q ss_pred cCCCCceEEEEeeCCCCchhhcCCCeeEEEEeCCCCeEEEeCCCCCCCCCeeeEe
Q psy8843 21 KTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKVKEKKIKDLNI 75 (76)
Q Consensus 21 ~~~~~~VrV~VR~RPln~rE~~~g~~~vV~~~~~~~~v~v~~p~~~~~~~KtFtF 75 (76)
....++|+|+|||||++.+|...|...++.+..+ .++.+. .|.|+|
T Consensus 3 ~~~~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~-~~~~~~--------~~~f~F 48 (325)
T 1bg2_A 3 DLAECNIKVMCRFRPLNESEVNRGDKYIAKFQGE-DTVVIA--------SKPYAF 48 (325)
T ss_dssp CCSSCEEEEEEEECCCCHHHHHHTCCBCCEEETT-TEEEET--------TEEEEC
T ss_pred CCCCCCEEEEEEcCCCChhHhccCCeeEEEECCC-CeEEEC--------CEEEEC
Confidence 4456899999999999999999998888888753 444442 367877
No 15
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=98.21 E-value=6.6e-07 Score=66.21 Aligned_cols=56 Identities=18% Similarity=0.144 Sum_probs=22.2
Q ss_pred hhccCCCCceEEEEeeCCCCchhhcCCCeeEEEEeCCCCeEEEeCCCCCCCCCeeeEe
Q psy8843 18 KKKKTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKVKEKKIKDLNI 75 (76)
Q Consensus 18 ~~~~~~~~~VrV~VR~RPln~rE~~~g~~~vV~~~~~~~~v~v~~p~~~~~~~KtFtF 75 (76)
...+...++|+|+|||||++.+|...+...||...+ ...+.+.++... ...+.|+|
T Consensus 14 ~~~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~-~~~~~i~~~~~~-~~~~~f~F 69 (388)
T 3bfn_A 14 LYFQGPPARVRVAVRLRPFVDGTAGASDPPCVRGMD-SCSLEIANWRNH-QETLKYQF 69 (388)
T ss_dssp CCSSSCCCCCEEEEEECCCC-------------------------------CEEEEEC
T ss_pred ccccCCCCCEEEEEECCCCChhhhccCCCceEEecC-CCeEEEecCCCC-CCeeEEEc
Confidence 345667789999999999999998877666665432 344555554322 24578888
No 16
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=98.20 E-value=7.3e-07 Score=64.96 Aligned_cols=47 Identities=34% Similarity=0.355 Sum_probs=33.1
Q ss_pred CCCceEEEEeeCCCCchhhcCCCeeEEEEeCCCCeEEEeCCCCCCCCCeeeEe
Q psy8843 23 QNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKVKEKKIKDLNI 75 (76)
Q Consensus 23 ~~~~VrV~VR~RPln~rE~~~g~~~vV~~~~~~~~v~v~~p~~~~~~~KtFtF 75 (76)
+.++|+|+|||||++.+|...|...+|.+..+...+...+ ..++|+|
T Consensus 2 e~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~i~~~~------~~~~F~F 48 (349)
T 1t5c_A 2 EEGAVAVCVRVRPLNSREESLGETAQVYWKTDNNVIYQVD------GSKSFNF 48 (349)
T ss_dssp -CCCEEEEEEECCCSCSSCTTTTCCCCCEEEETTEEEETT------SSCEEEC
T ss_pred CCCCEEEEEECCCCChhhhccCCCcEEEEeCCCCeEEECC------CCeEEEC
Confidence 4679999999999999999888776665544344443322 2578887
No 17
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=98.18 E-value=1.2e-06 Score=64.14 Aligned_cols=48 Identities=33% Similarity=0.389 Sum_probs=35.3
Q ss_pred ccCCCCceEEEEeeCCCCchhhcCCCeeEEEEeCC--CCeEEEeCCCCCCCCCeeeEe
Q psy8843 20 KKTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPN--RGVIEISNPKVKEKKIKDLNI 75 (76)
Q Consensus 20 ~~~~~~~VrV~VR~RPln~rE~~~g~~~vV~~~~~--~~~v~v~~p~~~~~~~KtFtF 75 (76)
.....++|+|+|||||++.+|...|..++|.+..+ ...+.+. .+.|+|
T Consensus 6 ~~~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~i~~~--------~~~f~F 55 (365)
T 2y65_A 6 EIPAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIA--------GKVYLF 55 (365)
T ss_dssp --CCEEECEEEEEECCCCHHHHHTTCCBCEECCSSSTTCEEEET--------TEEEEC
T ss_pred cCCCCCCeEEEEEcCcCChhHhccCCceEEEeCCCCCCcEEEEC--------CEEEeC
Confidence 34456899999999999999999999888888653 2333331 367887
No 18
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=98.04 E-value=2.4e-06 Score=62.69 Aligned_cols=50 Identities=18% Similarity=0.170 Sum_probs=32.4
Q ss_pred CCCCceEEEEeeCCCCchhhcCCCeeEEEEeCCCCeEEEeCCCCCCCCCeeeEe
Q psy8843 22 TQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKVKEKKIKDLNI 75 (76)
Q Consensus 22 ~~~~~VrV~VR~RPln~rE~~~g~~~vV~~~~~~~~v~v~~p~~~~~~~KtFtF 75 (76)
+..++|+|+|||||++.+|...+...++... +...+..... ....+.|+|
T Consensus 2 e~~~~i~V~vRvRP~~~~E~~~~~~~~~~~~-~~~~v~~~~~---~~~~~~f~F 51 (369)
T 3cob_A 2 DMKGKIRVYCRLRPLCEKEIIAKERNAIRSV-DEFTVEHLWK---DDKAKQHMY 51 (369)
T ss_dssp --CCBCEEEEEECCCCHHHHHTTCCBCEEEC-SSSEEEEECT---TSCEEEEEC
T ss_pred CCCCCeEEEEECCCCChhhccCCCcEEEEcC-CcEEEEecCC---CCCceEEec
Confidence 3457999999999999999888776555443 2223333221 223588988
No 19
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=98.01 E-value=2.3e-06 Score=63.01 Aligned_cols=26 Identities=19% Similarity=0.264 Sum_probs=18.8
Q ss_pred cCCCCceEEEEeeCCCCchhhcCCCe
Q psy8843 21 KTQNESVQVVVRCRPMNSSEISGGYD 46 (76)
Q Consensus 21 ~~~~~~VrV~VR~RPln~rE~~~g~~ 46 (76)
.+..++|+|+|||||++.+|...+..
T Consensus 18 ~~~~~~irV~vRvRP~~~~E~~~~~~ 43 (376)
T 2rep_A 18 GSLKGNIRVFCRVRPVLPGEPTPPPG 43 (376)
T ss_dssp -----CEEEEEEECCCCTTSCCCCGG
T ss_pred hccCCCeEEEEEcCCCChhhcccCCc
Confidence 34568999999999999999887643
No 20
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}
Probab=97.92 E-value=7.3e-06 Score=59.58 Aligned_cols=52 Identities=12% Similarity=0.118 Sum_probs=34.0
Q ss_pred CCceEEEEeeCCCCchhhcCCCeeEEEEe-C--CCCeEEEeCCCCCCCCCeeeEeC
Q psy8843 24 NESVQVVVRCRPMNSSEISGGYDKVVDMW-P--NRGVIEISNPKVKEKKIKDLNIL 76 (76)
Q Consensus 24 ~~~VrV~VR~RPln~rE~~~g~~~vV~~~-~--~~~~v~v~~p~~~~~~~KtFtF~ 76 (76)
.++|+|+|||||++..|...+...+|... . +...+.+..+.. ....+.|+|.
T Consensus 4 kgnIrV~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~f~FD 58 (349)
T 3t0q_A 4 RGNIRVYCRVRPPLLNEPQDMSHILIEKFNEAKGAQSLTINRNEG-RILSYNFQFD 58 (349)
T ss_dssp -CEEEEEEEECCCCTTSCCCCTTEEECCCBC--CBEEEEEEECC---CEEEEEEES
T ss_pred CCCcEEEEEeCCCCccccccCceEEEeeccCCCCceEEEEcCCCC-cccceeeecC
Confidence 36899999999999999888777666532 1 123455554332 2346788883
No 21
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens}
Probab=97.88 E-value=7.8e-06 Score=59.08 Aligned_cols=48 Identities=17% Similarity=0.337 Sum_probs=30.9
Q ss_pred CCceEEEEeeCCCCchhhcCCC-eeEEEEeCC-CCeEEEeCCCCCCCCCeeeEe
Q psy8843 24 NESVQVVVRCRPMNSSEISGGY-DKVVDMWPN-RGVIEISNPKVKEKKIKDLNI 75 (76)
Q Consensus 24 ~~~VrV~VR~RPln~rE~~~g~-~~vV~~~~~-~~~v~v~~p~~~~~~~KtFtF 75 (76)
.++|+|+|||||++.+|...+. ..+|.++.. ...+.+... ...++|+|
T Consensus 3 ~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~f~F 52 (330)
T 2h58_A 3 KGNIRVIARVRPVTKEDGEGPEATNAVTFDADDDSIIHLLHK----GKPVSFEL 52 (330)
T ss_dssp --CEEEEEEECCCCGGGCSSGGGSBCEEECSSCTTEEEEEET----TEEEEEEC
T ss_pred CCCEEEEEEcCCCChhhcccCCCccEEEEeCCCCcEEEEcCC----CCeeEEec
Confidence 4789999999999999976543 456666543 334444432 23578887
No 22
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=97.83 E-value=4.6e-05 Score=56.64 Aligned_cols=54 Identities=13% Similarity=0.107 Sum_probs=34.3
Q ss_pred cCCCCceEEEEeeCCCCchhhcCCCeeEEEEeCCCCeEEEeCCCCC---CCCCeeeEeC
Q psy8843 21 KTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKVK---EKKIKDLNIL 76 (76)
Q Consensus 21 ~~~~~~VrV~VR~RPln~rE~~~g~~~vV~~~~~~~~v~v~~p~~~---~~~~KtFtF~ 76 (76)
.+..++|+|+|||||++..|...+. +++.... ..++.+..+... ....+.|+|.
T Consensus 55 ~~l~gnIrV~vRvRP~~~~E~~~~~-~~~~~~~-~~~v~~~~~~~~~~~~~~~~~F~FD 111 (412)
T 3u06_A 55 MDLRDNIRVFCRIRPPLESEENRMC-CTWTYHD-ESTVELQSIDAQAKSKMGQQIFSFD 111 (412)
T ss_dssp HHHTCSEEEEEEECCCCGGGTTSCB-CEEEEEE-TTEEEEECCC-------CCCEEECS
T ss_pred HHhCCCEEEEEEcCCCCchhccCcc-eEEEecC-CCEEEEecCCcccccccCceEEeeC
Confidence 3456899999999999999976654 4444432 356666654321 1235789883
No 23
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A*
Probab=97.81 E-value=1.9e-05 Score=57.43 Aligned_cols=46 Identities=15% Similarity=0.195 Sum_probs=26.0
Q ss_pred cCCCCceEEEEeeCCCCchhhcCCCeeEEEEeC--CCCeEEEeCCCCCCCCCeeeEe
Q psy8843 21 KTQNESVQVVVRCRPMNSSEISGGYDKVVDMWP--NRGVIEISNPKVKEKKIKDLNI 75 (76)
Q Consensus 21 ~~~~~~VrV~VR~RPln~rE~~~g~~~vV~~~~--~~~~v~v~~p~~~~~~~KtFtF 75 (76)
..+.++|+|+|||||++..|. .+...+|.+.. ++..+.+ + .+.|+|
T Consensus 18 ~~~~~~VrV~vRvRP~~~~e~-~~~~~~v~~~~~~~~~~~~~-~-------~~~F~F 65 (344)
T 3dc4_A 18 GAKLSAVRIAVREAPYRQFLG-RREPSVVQFPPWSDGKSLIV-D-------QNEFHF 65 (344)
T ss_dssp -CCCSEEEEEEEECCCC--------CCSEECCSSSCSSEEEE-T-------TEEEEC
T ss_pred CCCCCCeEEEEECCCCCcccc-cCCceEEEecCCCCCceEEe-c-------CcEEEc
Confidence 445688999999999998884 34556777653 2333333 1 367877
No 24
>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens}
Probab=97.77 E-value=3.6e-05 Score=56.25 Aligned_cols=49 Identities=14% Similarity=0.230 Sum_probs=32.1
Q ss_pred CCCCceEEEEeeCCCCchhhcCCCeeEEEEeCCCCeEEEeCCCC-------CCCCCeeeEe
Q psy8843 22 TQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKV-------KEKKIKDLNI 75 (76)
Q Consensus 22 ~~~~~VrV~VR~RPln~rE~~~g~~~vV~~~~~~~~v~v~~p~~-------~~~~~KtFtF 75 (76)
+..++|+|+|||||++..|.+ ++....+...+.+..+.. .....++|+|
T Consensus 21 ~~~~~i~V~vRvRP~~~~e~~-----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~F~F 76 (359)
T 3nwn_A 21 GTRKKVHAFVRVKPTDDFAHE-----MIRYGDDKRSIDIHLKKDIRRGVVNNQQTDWSFKL 76 (359)
T ss_dssp ---CCEEEEEEECCCSSCCTT-----TEEECTTSSEEEEECCCCSSHHHHTTSCCEEEEEC
T ss_pred CCCCCEEEEEEcCCCCccccc-----ceeecCCCcEEEEecCCccccccccCCcCceEeec
Confidence 345789999999999877742 344555567777776643 1234578888
No 25
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*
Probab=97.61 E-value=4e-05 Score=55.70 Aligned_cols=50 Identities=14% Similarity=0.248 Sum_probs=29.4
Q ss_pred CCceEEEEeeCCCCc-hhhcCCCeeEEEEe---C--CCCeEEEeCCCCCCCCCeeeEeC
Q psy8843 24 NESVQVVVRCRPMNS-SEISGGYDKVVDMW---P--NRGVIEISNPKVKEKKIKDLNIL 76 (76)
Q Consensus 24 ~~~VrV~VR~RPln~-rE~~~g~~~vV~~~---~--~~~~v~v~~p~~~~~~~KtFtF~ 76 (76)
.++|+|+|||||++. .|... ..++.+. . ...++.+..+.. ....++|+|.
T Consensus 2 k~nIrV~vRvRP~~~~~e~~~--~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~f~FD 57 (347)
T 1f9v_A 2 RGNIRVYCRIRPALKNLENSD--TSLINVNEFDDNSGVQSMEVTKIQN-TAQVHEFKFD 57 (347)
T ss_dssp -CEEEEEEEECCCCTTTCCCT--TEEEEECCCBTTTTBEEEEEEEGGG-TTCEEEEEES
T ss_pred CCCeEEEEEeCCCCcccccCC--CceEEEecccCCCCceEEEEecCCC-CcCceEEeeC
Confidence 368999999999997 55333 3334432 1 123455655422 2346889883
No 26
>2nr8_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural genomics consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} PDB: 3nwn_A*
Probab=97.56 E-value=0.00011 Score=53.61 Aligned_cols=49 Identities=14% Similarity=0.234 Sum_probs=33.1
Q ss_pred CCCCceEEEEeeCCCCchhhcCCCeeEEEEeCCCCeEEEeCCCCC-------CCCCeeeEe
Q psy8843 22 TQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKVK-------EKKIKDLNI 75 (76)
Q Consensus 22 ~~~~~VrV~VR~RPln~rE~~~g~~~vV~~~~~~~~v~v~~p~~~-------~~~~KtFtF 75 (76)
+..++|+|+|||||++..+ ..++.++.+..++.+..+... ....++|+|
T Consensus 20 ~~~g~IrV~vRvRP~~~~~-----~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~F~f 75 (358)
T 2nr8_A 20 GTRKKVHAFVRVKPTDDFA-----HEMIRYGDDKRSIDIHLKKDIRRGVVNNQQTDWSFKL 75 (358)
T ss_dssp ---CCEEEEEEECCCSSCC-----TTTEEECTTSSEEEEECCCCSSHHHHTTSCCEEEEEC
T ss_pred CCCCCeEEEEEcCCCCCCc-----cceeEECCCCCEEEEecCCccccccccCCCcceEEEC
Confidence 4568999999999997543 345777777788888776532 223567887
No 27
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=97.19 E-value=0.00036 Score=51.52 Aligned_cols=55 Identities=16% Similarity=0.175 Sum_probs=31.0
Q ss_pred cCCCCceEEEEeeCCCCch-hhcCCCeeEEEE-eCCC--CeEEEeCCCCCCCCCeeeEeC
Q psy8843 21 KTQNESVQVVVRCRPMNSS-EISGGYDKVVDM-WPNR--GVIEISNPKVKEKKIKDLNIL 76 (76)
Q Consensus 21 ~~~~~~VrV~VR~RPln~r-E~~~g~~~vV~~-~~~~--~~v~v~~p~~~~~~~KtFtF~ 76 (76)
.+..++|+|+|||||++.. |...+....|.. +... ..+.+..+.. ....+.|+|.
T Consensus 55 ~elkgnIrV~vRvRP~~~~~e~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~F~FD 113 (403)
T 4etp_A 55 QELRGNIRVYLRIRPALKNLENSDTSLINVNEFDDNSGVQSMEVTKIQN-TAQVHEFKFD 113 (403)
T ss_dssp HHHHCSEEEEEEECCCCTTTSCSCCTTEEECCCBTTTTBEEEEEEECSS-SCEEEEEEES
T ss_pred HHcCCCeEEEEEeCCCCCcccccCCCeeEEeeccCCCCceEEEEecCCC-CcCceEEEcC
Confidence 3445899999999999987 433333333332 2211 2344444322 2346889883
No 28
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=94.37 E-value=0.023 Score=44.03 Aligned_cols=56 Identities=14% Similarity=0.042 Sum_probs=28.6
Q ss_pred cCCCCceEEEEeeC----CCCchhhcCCCe-eEEEE-----eCCCCeEEEeCCCCCCCCCeeeEeC
Q psy8843 21 KTQNESVQVVVRCR----PMNSSEISGGYD-KVVDM-----WPNRGVIEISNPKVKEKKIKDLNIL 76 (76)
Q Consensus 21 ~~~~~~VrV~VR~R----Pln~rE~~~g~~-~vV~~-----~~~~~~v~v~~p~~~~~~~KtFtF~ 76 (76)
..--+.++|.||+| |-...|...|.. ..+.. +....++++..+..+....++|+|.
T Consensus 370 ~~il~~~rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fd 435 (715)
T 4h1g_A 370 AALKGNIRVFCRIRNVSSSSSSSSSSSSEDIIQYEAPQDINDESKQELVITRNINNNFSNLRFLFD 435 (715)
T ss_dssp SSSSCSEEEEEEECCCC-------------BCEEECCC-------CEEEEEEEETTEEEEEEEECS
T ss_pred HHHHhcCeEEEEEeccccccccccccccccceeccCCCCCCCCCCCeEEEcCCCCCCCCCeEEEec
Confidence 45567899999999 555556555544 33332 2235677777766656678899983
No 29
>2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae}
Probab=85.87 E-value=0.65 Score=33.45 Aligned_cols=42 Identities=12% Similarity=0.008 Sum_probs=25.7
Q ss_pred cCCCCceEEEEeeCCCCchhhcCCCeeEEEEeCCCCeEEEeCCCCCCCCCeeeEe
Q psy8843 21 KTQNESVQVVVRCRPMNSSEISGGYDKVVDMWPNRGVIEISNPKVKEKKIKDLNI 75 (76)
Q Consensus 21 ~~~~~~VrV~VR~RPln~rE~~~g~~~vV~~~~~~~~v~v~~p~~~~~~~KtFtF 75 (76)
.+-.++|||.+||||..-. ..+.|...+. .+.+ .. . .++|.|
T Consensus 20 ~ELKGnIRVFcrvrp~~~p-----~~~~v~y~~~--~I~v-~~---~--~k~f~F 61 (298)
T 2o0a_A 20 IEQKGTMRCYAYVMEQNLP-----ENLLFDYENG--VITQ-GL---S--EHVYKF 61 (298)
T ss_dssp HHHHTCCEEEEEECGGGSC-----TTEEEETTTT--EEEE-TT---T--CCEEEC
T ss_pred HHhhCceEEEEEeccccCC-----ccceeecCcc--ceee-cC---C--CceEEe
Confidence 3345899999999997511 2355665542 2554 32 1 278887
No 30
>2jtd_A Myomesin-1, skelemin; immunoglobulin domain, muscle protein, thick filament, immune system, cell adhesion; NMR {Mus musculus}
Probab=25.65 E-value=61 Score=20.77 Aligned_cols=40 Identities=23% Similarity=0.292 Sum_probs=27.2
Q ss_pred CCchhhcCCCeeEEEEeCCCCeEEEeCCCCCCCCCeeeEe
Q psy8843 36 MNSSEISGGYDKVVDMWPNRGVIEISNPKVKEKKIKDLNI 75 (76)
Q Consensus 36 ln~rE~~~g~~~vV~~~~~~~~v~v~~p~~~~~~~KtFtF 75 (76)
+|.+|+..|..--+.++..++.+.+.-..-..+..-+|||
T Consensus 74 fNdkei~~~~~~ki~fD~~tGiIEmime~~~~edeGTyT~ 113 (142)
T 2jtd_A 74 FNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTF 113 (142)
T ss_dssp ETTEECCSSSSCCEEECSSSCCEEEEECCCCTTTCCEEEE
T ss_pred eccceeccCCCeeEeecccCChhhhhHhhcccccCceEEE
Confidence 6888888888888888877777765433323334567776
Done!