BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8846
(568 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54385|DHE3_DROME Glutamate dehydrogenase, mitochondrial OS=Drosophila melanogaster
GN=Gdh PE=1 SV=2
Length = 562
Score = 303 bits (775), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 141/187 (75%), Positives = 166/187 (88%), Gaps = 3/187 (1%)
Query: 148 TAVQSQQRNL---HDIPEKLKDIPTAENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTI 204
TAV R H IP++LKD+PTA++P+FFDMVE+FFHR CQIAE+ LV+D+KG++T
Sbjct: 27 TAVMQSSRGYATEHQIPDRLKDVPTAKDPRFFDMVEYFFHRGCQIAEESLVDDMKGKLTR 86
Query: 205 EDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDD 264
++KK+KV+GIL+ MQPCDHIIEI+FP+RRD+G+YE+ITGYRAQHSTH+TP KGGIRFS D
Sbjct: 87 DEKKQKVKGILMLMQPCDHIIEIAFPLRRDAGNYEMITGYRAQHSTHKTPTKGGIRFSLD 146
Query: 265 VSRDEVKALSALMTFKCACVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFI 324
VSRDEVKALSALMTFKCACVDVPFGGAKAG+KINPK YSE+ELEKITRRFTLELAKKGFI
Sbjct: 147 VSRDEVKALSALMTFKCACVDVPFGGAKAGLKINPKEYSEHELEKITRRFTLELAKKGFI 206
Query: 325 GEFKAVP 331
G VP
Sbjct: 207 GPGVDVP 213
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 98/114 (85%), Gaps = 3/114 (2%)
Query: 37 TAVQSQQRNL---HDIPEKLKDIPTAENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTI 93
TAV R H IP++LKD+PTA++P+FFDMVE+FFHR CQIAE+ LV+D+KG++T
Sbjct: 27 TAVMQSSRGYATEHQIPDRLKDVPTAKDPRFFDMVEYFFHRGCQIAEESLVDDMKGKLTR 86
Query: 94 EDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGA 147
++KK+KV+GIL+ MQPCDHIIEI+FP+RRD+G+YE+ITGYRAQHSTH+TP KG
Sbjct: 87 DEKKQKVKGILMLMQPCDHIIEIAFPLRRDAGNYEMITGYRAQHSTHKTPTKGG 140
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/81 (80%), Positives = 68/81 (83%), Gaps = 1/81 (1%)
Query: 488 TMERSARAIMKTAMKYNLGHLDINAHACVTGKPINQGGIHGRISATGRGVFHGLENFIME 547
T ER I T K +GHLDINAHACVTGKPINQGGIHGR+SATGRGVFHGLENFI E
Sbjct: 219 TGEREMSWIADTYAK-TIGHLDINAHACVTGKPINQGGIHGRVSATGRGVFHGLENFINE 277
Query: 548 ANYMSMVGTTPGWGGKTFIVQ 568
ANYMS +GTTPGWGGKTFIVQ
Sbjct: 278 ANYMSQIGTTPGWGGKTFIVQ 298
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/75 (89%), Positives = 69/75 (92%), Gaps = 1/75 (1%)
Query: 442 NESVQESLERRFGNVGGRIPVTPSESFQKRISGASEKDIVHSGLDYTMERSARAIMKTAM 501
+ESVQESLERRFG VGGRIPVTPSESFQKRISGASEKDIVHSGLDYTMERSARAIMKTAM
Sbjct: 472 DESVQESLERRFGRVGGRIPVTPSESFQKRISGASEKDIVHSGLDYTMERSARAIMKTAM 531
Query: 502 KYNLGHLDINAHACV 516
KYNLG LD+ A V
Sbjct: 532 KYNLG-LDLRTAAYV 545
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 64/98 (65%), Gaps = 8/98 (8%)
Query: 353 GPVSMYLPQIWVQEKGKCPGLPTHTR--------KPLALEEYKLDNGTIVGFPGAVPYEG 404
G V ++ + + C G+ H P LE+YK ++GTIVG+ A PYEG
Sbjct: 301 GNVGLHTTRYLTRAGATCIGVIEHDGTLYNPEGIDPKLLEDYKNEHGTIVGYQNAKPYEG 360
Query: 405 ENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAAN 442
ENLM+E CDIF+PAAVEKVIT NA++IQAKIIAEAAN
Sbjct: 361 ENLMFEKCDIFIPAAVEKVITSENANRIQAKIIAEAAN 398
>sp|P26443|DHE3_MOUSE Glutamate dehydrogenase 1, mitochondrial OS=Mus musculus GN=Glud1
PE=1 SV=1
Length = 558
Score = 243 bits (620), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 111/161 (68%), Positives = 134/161 (83%)
Query: 171 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFP 230
++P FF MVE FF R I EDKLVED+K R + E K+ +VRGIL ++PC+H++ +SFP
Sbjct: 62 DDPNFFKMVEGFFDRGASIVEDKLVEDLKTRESEEQKRNRVRGILRIIKPCNHVLSLSFP 121
Query: 231 VRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGG 290
+RRD G +E+I GYRAQHS HRTPCKGGIR+S DVS DEVKAL++LMT+KCA VDVPFGG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGG 181
Query: 291 AKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
AKAG+KINPKNY++NELEKITRRFT+ELAKKGFIG VP
Sbjct: 182 AKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGIDVP 222
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 60 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFP 119
++P FF MVE FF R I EDKLVED+K R + E K+ +VRGIL ++PC+H++ +SFP
Sbjct: 62 DDPNFFKMVEGFFDRGASIVEDKLVEDLKTRESEEQKRNRVRGILRIIKPCNHVLSLSFP 121
Query: 120 VRRDSGDYEIITGYRAQHSTHRTPCKGA 147
+RRD G +E+I GYRAQHS HRTPCKG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGG 149
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 488 TMERSARAIMKTAMKYNLGHLDINAHACVTGKPINQGGIHGRISATGRGVFHGLENFIME 547
T ER I T +GH DINAHACVTGKPI+QGGIHGRISATGRGVFHG+ENFI E
Sbjct: 228 TGEREMSWIADTYAS-TIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINE 286
Query: 548 ANYMSMVGTTPGWGGKTFIVQ 568
A+YMS++G TPG+G KTF+VQ
Sbjct: 287 ASYMSILGMTPGFGDKTFVVQ 307
Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 109/213 (51%), Gaps = 68/213 (31%)
Query: 380 PLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAE 439
P LE++KL +G+I+GFP A YEG +++ CDI +PAA EK +TK+NA +++AKIIAE
Sbjct: 345 PKELEDFKLQHGSILGFPKAKVYEG-SILEADCDILIPAASEKQLTKSNAPRVKAKIIAE 403
Query: 440 AAN-----ESVQESLERR-------FGNVGG----------------------------- 458
AN E+ + LER + N GG
Sbjct: 404 GANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSN 463
Query: 459 -RIPVTPSESFQK-------------------RISGASEKDIVHSGLDYTMERSARAIMK 498
+ ++ ES ++ RISGASEKDIVHSGL YTMERSAR IM+
Sbjct: 464 YHLLMSVQESLERKFGKHGGTIPVVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMR 523
Query: 499 TAMKYNLGHLDINAHACVTG-----KPINQGGI 526
TAMKYNLG LD+ A V K N+ G+
Sbjct: 524 TAMKYNLG-LDLRTAAYVNAIEKVFKVYNEAGV 555
>sp|P00367|DHE3_HUMAN Glutamate dehydrogenase 1, mitochondrial OS=Homo sapiens GN=GLUD1
PE=1 SV=2
Length = 558
Score = 243 bits (619), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 110/161 (68%), Positives = 134/161 (83%)
Query: 171 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFP 230
++P FF MVE FF R I EDKLVED++ R + E K+ +VRGIL ++PC+H++ +SFP
Sbjct: 62 DDPNFFKMVEGFFDRGASIVEDKLVEDLRTRESEEQKRNRVRGILRIIKPCNHVLSLSFP 121
Query: 231 VRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGG 290
+RRD G +E+I GYRAQHS HRTPCKGGIR+S DVS DEVKAL++LMT+KCA VDVPFGG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGG 181
Query: 291 AKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
AKAG+KINPKNY++NELEKITRRFT+ELAKKGFIG VP
Sbjct: 182 AKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGIDVP 222
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 67/88 (76%)
Query: 60 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFP 119
++P FF MVE FF R I EDKLVED++ R + E K+ +VRGIL ++PC+H++ +SFP
Sbjct: 62 DDPNFFKMVEGFFDRGASIVEDKLVEDLRTRESEEQKRNRVRGILRIIKPCNHVLSLSFP 121
Query: 120 VRRDSGDYEIITGYRAQHSTHRTPCKGA 147
+RRD G +E+I GYRAQHS HRTPCKG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGG 149
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 488 TMERSARAIMKTAMKYNLGHLDINAHACVTGKPINQGGIHGRISATGRGVFHGLENFIME 547
T ER I T +GH DINAHACVTGKPI+QGGIHGRISATGRGVFHG+ENFI E
Sbjct: 228 TGEREMSWIADTYAS-TIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINE 286
Query: 548 ANYMSMVGTTPGWGGKTFIVQ 568
A+YMS++G TPG+G KTF+VQ
Sbjct: 287 ASYMSILGMTPGFGDKTFVVQ 307
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 110/213 (51%), Gaps = 68/213 (31%)
Query: 380 PLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAE 439
P LE++KL +G+I+GFP A PYEG +++ CDI +PAA EK +TK+NA +++AKIIAE
Sbjct: 345 PKELEDFKLQHGSILGFPKAKPYEG-SILEADCDILIPAASEKQLTKSNAPRVKAKIIAE 403
Query: 440 AAN-----ESVQESLERR-------FGNVGG----------------------------- 458
AN E+ + LER + N GG
Sbjct: 404 GANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSN 463
Query: 459 -RIPVTPSESFQK-------------------RISGASEKDIVHSGLDYTMERSARAIMK 498
+ ++ ES ++ RISGASEKDIVHSGL YTMERSAR IM+
Sbjct: 464 YHLLMSVQESLERKFGKHGGTIPIVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMR 523
Query: 499 TAMKYNLGHLDINAHACVTG-----KPINQGGI 526
TAMKYNLG LD+ A V K N+ G+
Sbjct: 524 TAMKYNLG-LDLRTAAYVNAIEKVFKVYNEAGV 555
>sp|P00366|DHE3_BOVIN Glutamate dehydrogenase 1, mitochondrial OS=Bos taurus GN=GLUD1
PE=1 SV=2
Length = 558
Score = 243 bits (619), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 111/161 (68%), Positives = 133/161 (82%)
Query: 171 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFP 230
++P FF MVE FF R I EDKLVED+K R T E K+ +VR IL ++PC+H++ +SFP
Sbjct: 62 DDPNFFKMVEGFFDRGASIVEDKLVEDLKTRETEEQKRNRVRSILRIIKPCNHVLSLSFP 121
Query: 231 VRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGG 290
+RRD G +E+I GYRAQHS HRTPCKGGIR+S DVS DEVKAL++LMT+KCA VDVPFGG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGG 181
Query: 291 AKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
AKAG+KINPKNY++NELEKITRRFT+ELAKKGFIG VP
Sbjct: 182 AKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGVDVP 222
Score = 122 bits (306), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 66/88 (75%)
Query: 60 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFP 119
++P FF MVE FF R I EDKLVED+K R T E K+ +VR IL ++PC+H++ +SFP
Sbjct: 62 DDPNFFKMVEGFFDRGASIVEDKLVEDLKTRETEEQKRNRVRSILRIIKPCNHVLSLSFP 121
Query: 120 VRRDSGDYEIITGYRAQHSTHRTPCKGA 147
+RRD G +E+I GYRAQHS HRTPCKG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGG 149
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 488 TMERSARAIMKTAMKYNLGHLDINAHACVTGKPINQGGIHGRISATGRGVFHGLENFIME 547
T ER I T +GH DINAHACVTGKPI+QGGIHGRISATGRGVFHG+ENFI E
Sbjct: 228 TGEREMSWIADTYAS-TIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINE 286
Query: 548 ANYMSMVGTTPGWGGKTFIVQ 568
A+YMS++G TPG+G KTF+VQ
Sbjct: 287 ASYMSILGMTPGFGDKTFVVQ 307
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 103/199 (51%), Gaps = 63/199 (31%)
Query: 380 PLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAE 439
P LE++KL +GTI+GFP A YEG L + CDI +PAA EK +TK+NA +++AKIIAE
Sbjct: 345 PKELEDFKLQHGTILGFPKAKIYEGSILEVD-CDILIPAASEKQLTKSNAPRVKAKIIAE 403
Query: 440 AAN-----ESVQESLERR-------FGNVGG----------------------------- 458
AN E+ + LER + N GG
Sbjct: 404 GANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLNNLNHVSYGRLTFKYERDSN 463
Query: 459 -RIPVTPSESFQK-------------------RISGASEKDIVHSGLDYTMERSARAIMK 498
+ ++ ES ++ RISGASEKDIVHSGL YTMERSAR IM+
Sbjct: 464 YHLLMSVQESLERKFGKHGGTIPIVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMR 523
Query: 499 TAMKYNLGHLDINAHACVT 517
TAMKYNLG LD+ A V
Sbjct: 524 TAMKYNLG-LDLRTAAYVN 541
>sp|P10860|DHE3_RAT Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus
GN=Glud1 PE=1 SV=2
Length = 558
Score = 243 bits (619), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 111/161 (68%), Positives = 133/161 (82%)
Query: 171 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFP 230
++P FF MVE FF R I EDKLVED+K R E K+ +VRGIL ++PC+H++ +SFP
Sbjct: 62 DDPNFFKMVEGFFDRGASIVEDKLVEDLKTRENEEQKRNRVRGILRIIKPCNHVLSLSFP 121
Query: 231 VRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGG 290
+RRD G +E+I GYRAQHS HRTPCKGGIR+S DVS DEVKAL++LMT+KCA VDVPFGG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGG 181
Query: 291 AKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
AKAG+KINPKNY++NELEKITRRFT+ELAKKGFIG VP
Sbjct: 182 AKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGIDVP 222
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 66/88 (75%)
Query: 60 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFP 119
++P FF MVE FF R I EDKLVED+K R E K+ +VRGIL ++PC+H++ +SFP
Sbjct: 62 DDPNFFKMVEGFFDRGASIVEDKLVEDLKTRENEEQKRNRVRGILRIIKPCNHVLSLSFP 121
Query: 120 VRRDSGDYEIITGYRAQHSTHRTPCKGA 147
+RRD G +E+I GYRAQHS HRTPCKG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGG 149
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Query: 488 TMERSARAIMKTAMKYNLGHLDINAHACVTGKPINQGGIHGRISATGRGVFHGLENFIME 547
T ER I T +GH DINAHACVTGKPI+QGGIHGRISATGRGVFHG+ENFI E
Sbjct: 228 TGEREMSWIADTYAS-TIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINE 286
Query: 548 ANYMSMVGTTPGWGGKTFIVQ 568
A+YMS++G TPG G KTF+VQ
Sbjct: 287 ASYMSILGMTPGLGDKTFVVQ 307
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 109/213 (51%), Gaps = 68/213 (31%)
Query: 380 PLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAE 439
P LE++KL +G+I+GFP A YEG +++ CDI +PAA EK +TK+NA +++AKIIAE
Sbjct: 345 PKELEDFKLQHGSILGFPKAKVYEG-SILEADCDILIPAASEKQLTKSNAPRVKAKIIAE 403
Query: 440 AAN-----ESVQESLERR-------FGNVGG----------------------------- 458
AN E+ + LER + N GG
Sbjct: 404 GANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSN 463
Query: 459 -RIPVTPSESFQK-------------------RISGASEKDIVHSGLDYTMERSARAIMK 498
+ ++ ES ++ RISGASEKDIVHSGL YTMERSAR IM+
Sbjct: 464 YHLLMSVQESLERKFGKHGGTIPVVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMR 523
Query: 499 TAMKYNLGHLDINAHACVTG-----KPINQGGI 526
TAMKYNLG LD+ A V K N+ G+
Sbjct: 524 TAMKYNLG-LDLRTAAYVNAIEKVFKVYNEAGV 555
>sp|Q64HZ9|DHE4_HYLLA Glutamate dehydrogenase 2, mitochondrial OS=Hylobates lar GN=GLUD2
PE=3 SV=1
Length = 555
Score = 241 bits (616), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 111/168 (66%), Positives = 135/168 (80%)
Query: 171 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFP 230
++P FF MVE FF R I EDKLV+D++ R + E K+ +VRGIL ++PC+H++ +SFP
Sbjct: 59 DDPNFFKMVEGFFDRGASIVEDKLVKDLRTRESEEQKRNRVRGILRIIKPCNHVLSLSFP 118
Query: 231 VRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGG 290
+RRD G +E+I GYRAQHS HRTPCKGGIR+S DVS DEVKAL++LMT+KCA VDVPFGG
Sbjct: 119 IRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSADVSVDEVKALASLMTYKCAVVDVPFGG 178
Query: 291 AKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVPGARAREG 338
AKAG+KINPKNY+ENELEKITRRFT+ELAKKGFIG VP G
Sbjct: 179 AKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGIDVPAPDMNTG 226
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 67/88 (76%)
Query: 60 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFP 119
++P FF MVE FF R I EDKLV+D++ R + E K+ +VRGIL ++PC+H++ +SFP
Sbjct: 59 DDPNFFKMVEGFFDRGASIVEDKLVKDLRTRESEEQKRNRVRGILRIIKPCNHVLSLSFP 118
Query: 120 VRRDSGDYEIITGYRAQHSTHRTPCKGA 147
+RRD G +E+I GYRAQHS HRTPCKG
Sbjct: 119 IRRDDGSWEVIEGYRAQHSQHRTPCKGG 146
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 488 TMERSARAIMKTAMKYNLGHLDINAHACVTGKPINQGGIHGRISATGRGVFHGLENFIME 547
T ER I T +GH DINAHACVTGKPI+QGGIHGRISATGRGVFHG+ENFI E
Sbjct: 225 TGEREMSWIADTYAS-TIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINE 283
Query: 548 ANYMSMVGTTPGWGGKTFIVQ 568
A+YMS++G TPG+G KTF+VQ
Sbjct: 284 ASYMSILGMTPGFGDKTFVVQ 304
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 104/199 (52%), Gaps = 63/199 (31%)
Query: 380 PLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAE 439
P LE++KL +G+I+GFP A PYEG +++ CDI +PAA EK +TK+NA +++AKIIAE
Sbjct: 342 PKELEDFKLQHGSILGFPKAKPYEG-SILEADCDILIPAASEKQLTKSNAPRVKAKIIAE 400
Query: 440 AAN-----ESVQESLERR-------FGNVGG----------------------------- 458
AN E+ + LER + N GG
Sbjct: 401 GANGPTTPEADKIFLERNIMVIPDLYVNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSN 460
Query: 459 -RIPVTPSESFQKR-------------------ISGASEKDIVHSGLDYTMERSARAIMK 498
+ ++ ES +++ ISGASEKDIVHS L YTMERSAR IM+
Sbjct: 461 YHLLMSVQESLERKFGKHGGTIPIVPTAEFQDSISGASEKDIVHSALAYTMERSARQIMR 520
Query: 499 TAMKYNLGHLDINAHACVT 517
TAMKYNLG LD+ A V
Sbjct: 521 TAMKYNLG-LDLRTAAYVN 538
>sp|Q64HZ8|DHE4_PANTR Glutamate dehydrogenase 2, mitochondrial OS=Pan troglodytes
GN=GLUD2 PE=3 SV=1
Length = 558
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 134/161 (83%)
Query: 171 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFP 230
++P FF MVE FF R I EDKLV+D++ + + E K+ +VRGIL ++PC+H++ +SFP
Sbjct: 62 DDPNFFKMVEGFFDRGASIVEDKLVKDLRTQESEEQKRNRVRGILRIIKPCNHVLSLSFP 121
Query: 231 VRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGG 290
+RRD G +E+I GYRAQHS HRTPCKGGIR+S DVS DEVKAL++LMT+KCA VDVPFGG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGG 181
Query: 291 AKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
AKAG+KINPKNY+ENELEKITRRFT+ELAKKGFIG VP
Sbjct: 182 AKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGVDVP 222
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 67/88 (76%)
Query: 60 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFP 119
++P FF MVE FF R I EDKLV+D++ + + E K+ +VRGIL ++PC+H++ +SFP
Sbjct: 62 DDPNFFKMVEGFFDRGASIVEDKLVKDLRTQESEEQKRNRVRGILRIIKPCNHVLSLSFP 121
Query: 120 VRRDSGDYEIITGYRAQHSTHRTPCKGA 147
+RRD G +E+I GYRAQHS HRTPCKG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGG 149
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Query: 488 TMERSARAIMKTAMKYNLGHLDINAHACVTGKPINQGGIHGRISATGRGVFHGLENFIME 547
T ER I T +GH DINAHACVTGKPI+QGGIHGRISATGRGVFHG+ENFI E
Sbjct: 228 TGEREMSWIADTYAS-TIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINE 286
Query: 548 ANYMSMVGTTPGWGGKTFIVQ 568
A+YMS++G TPG+ KTF+VQ
Sbjct: 287 ASYMSILGMTPGFRDKTFVVQ 307
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 102/199 (51%), Gaps = 63/199 (31%)
Query: 380 PLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAE 439
P LE+++L +G+++GFP A PYEG L + CDI +PAA EK +TK+NA +++AKIIAE
Sbjct: 345 PKELEDFRLQHGSLLGFPKAKPYEGSILEID-CDILIPAATEKQLTKSNAPRVKAKIIAE 403
Query: 440 AAN-----ESVQESLERR-------FGNVGG----------------------------- 458
AN E+ + LER + N GG
Sbjct: 404 GANGPTTPEADKIFLERNILVIPDLYLNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSN 463
Query: 459 -RIPVTPSESFQKR-------------------ISGASEKDIVHSGLDYTMERSARAIMK 498
+ ++ ES +++ ISGASEKDIVHS L YTMERSAR IM
Sbjct: 464 YHLLMSVQESLERKFGKHGGTIPIVPTAEFQDSISGASEKDIVHSALAYTMERSARQIMH 523
Query: 499 TAMKYNLGHLDINAHACVT 517
TAMKYNLG LD+ A V
Sbjct: 524 TAMKYNLG-LDLRTAAYVN 541
>sp|P49448|DHE4_HUMAN Glutamate dehydrogenase 2, mitochondrial OS=Homo sapiens GN=GLUD2
PE=1 SV=2
Length = 558
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 134/161 (83%)
Query: 171 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFP 230
++P FF MVE FF R I EDKLV+D++ + + E K+ +VRGIL ++PC+H++ +SFP
Sbjct: 62 DDPNFFKMVEGFFDRGASIVEDKLVKDLRTQESEEQKRNRVRGILRIIKPCNHVLSLSFP 121
Query: 231 VRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGG 290
+RRD G +E+I GYRAQHS HRTPCKGGIR+S DVS DEVKAL++LMT+KCA VDVPFGG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGG 181
Query: 291 AKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
AKAG+KINPKNY+ENELEKITRRFT+ELAKKGFIG VP
Sbjct: 182 AKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGVDVP 222
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 67/88 (76%)
Query: 60 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFP 119
++P FF MVE FF R I EDKLV+D++ + + E K+ +VRGIL ++PC+H++ +SFP
Sbjct: 62 DDPNFFKMVEGFFDRGASIVEDKLVKDLRTQESEEQKRNRVRGILRIIKPCNHVLSLSFP 121
Query: 120 VRRDSGDYEIITGYRAQHSTHRTPCKGA 147
+RRD G +E+I GYRAQHS HRTPCKG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGG 149
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Query: 488 TMERSARAIMKTAMKYNLGHLDINAHACVTGKPINQGGIHGRISATGRGVFHGLENFIME 547
T ER I T +GH DINAHACVTGKPI+QGGIHGRISATGRGVFHG+ENFI E
Sbjct: 228 TGEREMSWIADTYAS-TIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINE 286
Query: 548 ANYMSMVGTTPGWGGKTFIVQ 568
A+YMS++G TPG+ KTF+VQ
Sbjct: 287 ASYMSILGMTPGFRDKTFVVQ 307
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 102/199 (51%), Gaps = 63/199 (31%)
Query: 380 PLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAE 439
P LE++KL +G+I+GFP A PYEG L + CDI +PAA EK +TK+NA +++AKIIAE
Sbjct: 345 PKELEDFKLQHGSILGFPKAKPYEGSILEVD-CDILIPAATEKQLTKSNAPRVKAKIIAE 403
Query: 440 AAN-----ESVQESLERR-------FGNVGG----------------------------- 458
AN E+ + LER + N GG
Sbjct: 404 GANGPTTPEADKIFLERNILVIPDLYLNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSN 463
Query: 459 -RIPVTPSESFQKR-------------------ISGASEKDIVHSGLDYTMERSARAIMK 498
+ ++ ES +++ ISGASEKDIVHS L YTMERSAR IM
Sbjct: 464 YHLLLSVQESLERKFGKHGGTIPIVPTAEFQDSISGASEKDIVHSALAYTMERSARQIMH 523
Query: 499 TAMKYNLGHLDINAHACVT 517
TAMKYNLG LD+ A V
Sbjct: 524 TAMKYNLG-LDLRTAAYVN 541
>sp|Q64I00|DHE4_PONPY Glutamate dehydrogenase 2, mitochondrial OS=Pongo pygmaeus GN=GLUD2
PE=3 SV=1
Length = 558
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 134/161 (83%)
Query: 171 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFP 230
++P FF MVE FF R I EDKLV+D++ + + E K+ +VRGIL ++PC+H++ +SFP
Sbjct: 62 DDPNFFKMVEGFFDRGASIVEDKLVKDLRTQESEEQKRNRVRGILRIIKPCNHVLSLSFP 121
Query: 231 VRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGG 290
+RRD G +E+I GYRAQHS HRTPCKGGIR+S DVS DEVKAL++LMT+KCA VDVPFGG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGG 181
Query: 291 AKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
AKAG+KINPKNY+ENELEKITRRFT+ELAKKGFIG VP
Sbjct: 182 AKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGIDVP 222
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 67/88 (76%)
Query: 60 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFP 119
++P FF MVE FF R I EDKLV+D++ + + E K+ +VRGIL ++PC+H++ +SFP
Sbjct: 62 DDPNFFKMVEGFFDRGASIVEDKLVKDLRTQESEEQKRNRVRGILRIIKPCNHVLSLSFP 121
Query: 120 VRRDSGDYEIITGYRAQHSTHRTPCKGA 147
+RRD G +E+I GYRAQHS HRTPCKG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGG 149
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/81 (71%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Query: 488 TMERSARAIMKTAMKYNLGHLDINAHACVTGKPINQGGIHGRISATGRGVFHGLENFIME 547
T ER I T +GH DINAHACVTGKPI+QGGIHGRISATGRGVFHG+ENFI E
Sbjct: 228 TGEREMSWIADTYAS-TIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINE 286
Query: 548 ANYMSMVGTTPGWGGKTFIVQ 568
A+YMS VG TPG+G KTF+VQ
Sbjct: 287 ASYMSNVGMTPGFGDKTFVVQ 307
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 103/199 (51%), Gaps = 63/199 (31%)
Query: 380 PLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAE 439
P LE+++L +G+I+GFP A PYEG +++ CDI +PAA EK +TK+NA +++AKIIAE
Sbjct: 345 PKELEDFRLQHGSILGFPKAKPYEG-SILEADCDILIPAATEKQLTKSNAPRVKAKIIAE 403
Query: 440 AAN-----ESVQESLERR-------FGNVGG----------------------------- 458
AN E+ + LER + N GG
Sbjct: 404 GANGPTTPEADKIFLERNILVIPDVYLNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSN 463
Query: 459 -RIPVTPSESFQKR-------------------ISGASEKDIVHSGLDYTMERSARAIMK 498
+ ++ ES +++ ISGASEKDIVHS L YTMERSAR IM
Sbjct: 464 YHLLMSVQESLERKFGKHGGTIPIVPTAEFRDSISGASEKDIVHSALAYTMERSARQIMH 523
Query: 499 TAMKYNLGHLDINAHACVT 517
TAMKYNLG LD+ A V
Sbjct: 524 TAMKYNLG-LDLRTAAYVN 541
>sp|Q64I01|DHE4_GORGO Glutamate dehydrogenase 2, mitochondrial OS=Gorilla gorilla gorilla
GN=GLUD2 PE=3 SV=1
Length = 558
Score = 238 bits (608), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 108/161 (67%), Positives = 133/161 (82%)
Query: 171 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFP 230
++P FF MVE FF R I EDKLV+D++ + + E K+ +VRGIL ++PC+H++ + FP
Sbjct: 62 DDPNFFKMVEGFFDRGASIVEDKLVKDLRTQESEEQKRNRVRGILRIIKPCNHVLSLCFP 121
Query: 231 VRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGG 290
+RRD G +E+I GYRAQHS HRTPCKGGIR+S DVS DEVKAL++LMT+KCA VDVPFGG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGG 181
Query: 291 AKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
AKAG+KINPKNY+ENELEKITRRFT+ELAKKGFIG VP
Sbjct: 182 AKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGVDVP 222
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 66/88 (75%)
Query: 60 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFP 119
++P FF MVE FF R I EDKLV+D++ + + E K+ +VRGIL ++PC+H++ + FP
Sbjct: 62 DDPNFFKMVEGFFDRGASIVEDKLVKDLRTQESEEQKRNRVRGILRIIKPCNHVLSLCFP 121
Query: 120 VRRDSGDYEIITGYRAQHSTHRTPCKGA 147
+RRD G +E+I GYRAQHS HRTPCKG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGG 149
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Query: 488 TMERSARAIMKTAMKYNLGHLDINAHACVTGKPINQGGIHGRISATGRGVFHGLENFIME 547
T ER I T +GH DINAHACVTGKPI+QGGIHGRISATGRGVFHG+ENFI E
Sbjct: 228 TGEREMSWIADTYAS-TIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINE 286
Query: 548 ANYMSMVGTTPGWGGKTFIVQ 568
A+YMS++G TPG+ KTF+VQ
Sbjct: 287 ASYMSILGMTPGFRDKTFVVQ 307
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 98/199 (49%), Gaps = 63/199 (31%)
Query: 380 PLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAE 439
P LE+++L +G+I+GFP A PYEG L + CDI +PAA EK +TK+NA +++AKIIAE
Sbjct: 345 PKELEDFRLQHGSILGFPKAKPYEGSILEVD-CDILIPAATEKQLTKSNAPRVKAKIIAE 403
Query: 440 AANESVQESLERRFG------------NVGG----------------------------- 458
AN +R F N GG
Sbjct: 404 GANGPTTPEADRIFQERNILVIPDLYLNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSN 463
Query: 459 -RIPVTPSESFQKR-------------------ISGASEKDIVHSGLDYTMERSARAIMK 498
+ ++ ES +++ ISGASEKDIVHS L YTMERSAR IM
Sbjct: 464 YHLLMSVQESLERKFGKHGGTIPIVPTADFQDSISGASEKDIVHSALAYTMERSARQIMH 523
Query: 499 TAMKYNLGHLDINAHACVT 517
TAMKYNLG LD+ A V
Sbjct: 524 TAMKYNLG-LDLRTAAYVN 541
>sp|P82264|DHE3_CHAAC Glutamate dehydrogenase, mitochondrial OS=Chaenocephalus aceratus
GN=glud1 PE=1 SV=1
Length = 504
Score = 235 bits (599), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 108/161 (67%), Positives = 134/161 (83%)
Query: 171 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFP 230
++P FF MVE FF R I EDKLVED++ + T E KK +V GIL ++PC+H++ +SFP
Sbjct: 8 DDPNFFRMVEGFFDRGASIVEDKLVEDLRTKETPEQKKGRVAGILRIIKPCNHVLSLSFP 67
Query: 231 VRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGG 290
++RD+G++E+I GYRAQHS HRTPCKGGIR+S DVS DEVKAL++LMT+KCA VDVPFGG
Sbjct: 68 IKRDNGEWEVIEGYRAQHSQHRTPCKGGIRYSMDVSVDEVKALASLMTYKCAVVDVPFGG 127
Query: 291 AKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
AKAG++IN KNYS+NELEKITRRFT+ELAKKGFIG VP
Sbjct: 128 AKAGVRINTKNYSDNELEKITRRFTIELAKKGFIGPGIDVP 168
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 68/88 (77%)
Query: 60 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFP 119
++P FF MVE FF R I EDKLVED++ + T E KK +V GIL ++PC+H++ +SFP
Sbjct: 8 DDPNFFRMVEGFFDRGASIVEDKLVEDLRTKETPEQKKGRVAGILRIIKPCNHVLSLSFP 67
Query: 120 VRRDSGDYEIITGYRAQHSTHRTPCKGA 147
++RD+G++E+I GYRAQHS HRTPCKG
Sbjct: 68 IKRDNGEWEVIEGYRAQHSQHRTPCKGG 95
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Query: 488 TMERSARAIMKTAMKYNLGHLDINAHACVTGKPINQGGIHGRISATGRGVFHGLENFIME 547
T ER I T + H DINAHACVTGKPI+QGGIHGRISATGRGVFHG+ENF+ E
Sbjct: 174 TGEREMSWIADTYAN-TIAHTDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFMNE 232
Query: 548 ANYMSMVGTTPGWGGKTFIVQ 568
A+YMSMVG TPG KTF++Q
Sbjct: 233 ASYMSMVGLTPGVQDKTFVIQ 253
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Query: 444 SVQESLERRFGNVGGRIPVTPSESFQKRISGASEKDIVHSGLDYTMERSARAIMKTAMKY 503
SVQESLER+FG GG IPV P+ FQ R++GASEKDIVHSGL YTMERSAR IM+TA K+
Sbjct: 415 SVQESLERKFGKQGGPIPVVPTADFQARVAGASEKDIVHSGLAYTMERSARQIMRTASKH 474
Query: 504 NLGHLDINAHACVT 517
NLG LDI A V
Sbjct: 475 NLG-LDIRTAAYVN 487
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 380 PLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAE 439
P ALEEYKL NGTIVGFPGA PYEG +++ CDI +PAA EK +T+NNA +I+AKIIAE
Sbjct: 291 PKALEEYKLQNGTIVGFPGAKPYEG-SILEADCDILIPAAGEKQLTRNNARRIKAKIIAE 349
Query: 440 AANESVQESLERRF 453
AN ++ F
Sbjct: 350 GANGPTTPDADKIF 363
>sp|P00368|DHE3_CHICK Glutamate dehydrogenase 1, mitochondrial OS=Gallus gallus GN=GLUD1
PE=1 SV=1
Length = 503
Score = 232 bits (591), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 105/168 (62%), Positives = 134/168 (79%)
Query: 171 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFP 230
++P FF MVE FF R I EDKLVE ++ R ++E ++ +VRGIL ++PC+H++ +SFP
Sbjct: 8 DDPNFFKMVEGFFDRGASIVEDKLVEGLRTRQSMEQRRHRVRGILRIIKPCNHVLSVSFP 67
Query: 231 VRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGG 290
++RD G++E+I GYRAQHS RTPCKGGIR+S DVS DEVKAL++LMT+KCA VDVPFGG
Sbjct: 68 IKRDDGZWEVIEGYRAQHSHQRTPCKGGIRYSLDVSVDEVKALASLMTYKCAVVDVPFGG 127
Query: 291 AKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVPGARAREG 338
AKAG+KINPKNY++ +LEKITRRFT+ELAKKGFIG VP G
Sbjct: 128 AKAGVKINPKNYTDEDLEKITRRFTMELAKKGFIGPGVDVPAPNMSTG 175
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 67/88 (76%)
Query: 60 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFP 119
++P FF MVE FF R I EDKLVE ++ R ++E ++ +VRGIL ++PC+H++ +SFP
Sbjct: 8 DDPNFFKMVEGFFDRGASIVEDKLVEGLRTRQSMEQRRHRVRGILRIIKPCNHVLSVSFP 67
Query: 120 VRRDSGDYEIITGYRAQHSTHRTPCKGA 147
++RD G++E+I GYRAQHS RTPCKG
Sbjct: 68 IKRDDGZWEVIEGYRAQHSHQRTPCKGG 95
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 108/212 (50%), Gaps = 67/212 (31%)
Query: 380 PLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAE 439
P LE+YKL +GTI+GFP A EG +++ CDI +PAA EK +TK NAHK++AKIIAE
Sbjct: 291 PKELEDYKLQHGTIMGFPKAQKLEG-SILETDCDILIPAASEKQLTKANAHKVKAKIIAE 349
Query: 440 AAN-----ESVQESLERR-------FGNVGG----------------------------- 458
AN ++ + LER + N GG
Sbjct: 350 GANGPTTPQADKIFLERNIMVIPDLYLNAGGVTVSAFZZKNLNHVSYGRLTFKYERDSNY 409
Query: 459 RIPVTPSESFQK-------------------RISGASEKDIVHSGLDYTMERSARAIMKT 499
+ ++ ES ++ RISGASEKDIVHSGL YTMERSAR IM+T
Sbjct: 410 HLLMSVQESLERKFGKHGGTIPVVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMRT 469
Query: 500 AMKYNLGHLDINAHACVTG-----KPINQGGI 526
AMKYNLG LD+ A V K N+ G+
Sbjct: 470 AMKYNLG-LDLRTAAYVNAIEKVFKVYNEAGL 500
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Query: 488 TMERSARAIMKTAMKYNLGHLDINAHACVTGKPINQGGIHGRISATGRGVFHGLENFIME 547
T ER I T +GH DINAHACVT I+QGGIHGRISATGRG+F +ENFI
Sbjct: 174 TGEREMSWIADTYAS-TIGHYDINAHACVTKPGISQGGIHGRISATGRGLFGHIENFIEN 232
Query: 548 ANYMSMVGTTPGWGGKTFIVQ 568
A+YMS++G TPG+G KTF VQ
Sbjct: 233 ASYMSILGMTPGFGDKTFAVQ 253
>sp|Q54KB7|DHE3_DICDI Glutamate dehydrogenase, mitochondrial OS=Dictyostelium discoideum
GN=gluD PE=1 SV=1
Length = 502
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 106/178 (59%), Gaps = 24/178 (13%)
Query: 160 IPEKLKDIPTAEN------PKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRG 213
+P+ +K+ + P+F + + FF +A + K G
Sbjct: 18 VPQTIKNYSSVSQAEIDNEPRFLECFKTFFDKAAGLTNLK------------------PG 59
Query: 214 ILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKAL 273
+L M+ C+ + + FP++ + GD +II GYRAQHS HR PCKGGIRFS++V EV AL
Sbjct: 60 VLNNMKECNVALRVEFPIKNEHGDVDIIAGYRAQHSHHRLPCKGGIRFSEEVDLQEVMAL 119
Query: 274 SALMTFKCACVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
++LMT+KCA VDVPFGGAK G++I+PK Y+ + EKITR +TL L +K FIG VP
Sbjct: 120 ASLMTYKCAVVDVPFGGAKGGVRIDPKKYTVAQREKITRAYTLLLCQKNFIGPGVDVP 177
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 477 EKDIVHSGLDY------TMERSARAIMKTAMKYNLGHLDINAHACVTGKPINQGGIHGRI 530
+K+ + G+D T E+ I T +N D+++ ACVTGKPI+ GGI GR
Sbjct: 166 QKNFIGPGVDVPAPDMGTGEQEMAWIRDTYQAFNTN--DVDSMACVTGKPISSGGIRGRT 223
Query: 531 SATGRGVFHGLENFIMEANYMSMVGTTPGWGGKTFIVQ 568
ATG GVF+G+ F+ + G TPG GK+ ++Q
Sbjct: 224 EATGLGVFYGIREFLSYEEVLKKTGLTPGIKGKSIVIQ 261
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 25/118 (21%)
Query: 49 IPEKLKDIPTAEN------PKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRG 102
+P+ +K+ + P+F + + FF +A + K G
Sbjct: 18 VPQTIKNYSSVSQAEIDNEPRFLECFKTFFDKAAGLTNLK------------------PG 59
Query: 103 ILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGATAVQSQQRNLHDI 160
+L M+ C+ + + FP++ + GD +II GYRAQHS HR PCKG S++ +L ++
Sbjct: 60 VLNNMKECNVALRVEFPIKNEHGDVDIIAGYRAQHSHHRLPCKGGIRF-SEEVDLQEV 116
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 71/175 (40%), Gaps = 52/175 (29%)
Query: 382 ALEEYKLDNGTIVGFPGAVP-YEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEA 440
AL +YKL +GT + FPGA + + PCDI +PAA+EK I N IQAK+I EA
Sbjct: 301 ALNKYKLQHGTFIDFPGATNIVDSVKALEIPCDILIPAALEKQIHIGNVADIQAKLIGEA 360
Query: 441 ANESVQESLERRFGNVG------------------------------GRIPVTPSESFQK 470
AN + ++ N G GR+ ES +K
Sbjct: 361 ANGPMTPRADQILLNRGHVIIPDLLLNAGGVTVSYFEWLKNLSHVRFGRLNKKWEESSKK 420
Query: 471 R---------------------ISGASEKDIVHSGLDYTMERSARAIMKTAMKYN 504
I GA E DIV SGL+ TM+ + KTA + N
Sbjct: 421 LLLEFVESTVNKKLSEAERSLIIHGADEIDIVRSGLEDTMQNACAETRKTANEKN 475
>sp|P29051|DHE41_HALSI NAD-specific glutamate dehydrogenase A OS=Halobacterium salinarum
GN=gdhA PE=1 SV=1
Length = 435
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 72/107 (67%), Gaps = 2/107 (1%)
Query: 226 EISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACVD 285
E++ P+ RD G E+ TGYRAQH + R P KGG+R+ DV+RDE L MT+KCA +D
Sbjct: 60 EVTIPIERDDGTVEVFTGYRAQHDSVRGPYKGGLRYHPDVTRDECVGLGMWMTWKCAVMD 119
Query: 286 VPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVPG 332
+PFGGAK G+ +NPK S E E++TRRFT E+ + IG + +P
Sbjct: 120 LPFGGAKGGVAVNPKELSPEEKERLTRRFTQEI--RDVIGPNQDIPA 164
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 115 EISFPVRRDSGDYEIITGYRAQHSTHRTPCKG 146
E++ P+ RD G E+ TGYRAQH + R P KG
Sbjct: 60 EVTIPIERDDGTVEVFTGYRAQHDSVRGPYKG 91
Score = 40.8 bits (94), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 11/70 (15%)
Query: 373 LPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKI 432
+P+H +P A+ Y T++ E L+ D+ +PAA+ VITK NA I
Sbjct: 278 VPSHDEEPEAVTTYA---DTVIS--------NEELLTLDVDVLIPAALGNVITKENAEAI 326
Query: 433 QAKIIAEAAN 442
A ++ E AN
Sbjct: 327 AADLVVEGAN 336
>sp|P96110|DHE3_THEMA Glutamate dehydrogenase OS=Thermotoga maritima (strain ATCC 43589 /
MSB8 / DSM 3109 / JCM 10099) GN=gdhA PE=1 SV=4
Length = 416
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 75/109 (68%), Gaps = 2/109 (1%)
Query: 223 HIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCA 282
++ + FPVR D G E+ TGYR QH+ R P KGGIR+ DV+ DEVKAL+ MT+K A
Sbjct: 36 RVLIVEFPVRMDDGHVEVFTGYRVQHNVARGPAKGGIRYHPDVTLDEVKALAFWMTWKTA 95
Query: 283 CVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
+++PFGG K G++++PK S NELE+++RRF E+ + IG + +P
Sbjct: 96 VMNLPFGGGKGGVRVDPKKLSRNELERLSRRFFSEI--QVIIGPYNDIP 142
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 13/135 (9%)
Query: 383 LEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAAN 442
L YK ++GT+V +P E L+ DI VPAA+E I NA +I+AK + E AN
Sbjct: 258 LIRYKKEHGTVVTYPKGERITNEELLELDVDILVPAALEGAIHAGNAERIKAKAVVEGAN 317
Query: 443 ----ESVQESLERR--------FGNVGGRIPVTPSESFQKRISGASEKDIVHSGLDYTME 490
E L RR N GG + V+ E Q S + D V + L+ M+
Sbjct: 318 GPTTPEADEILSRRGILVVPDILANAGG-VTVSYFEWVQDLQSFFWDLDQVRNALEKMMK 376
Query: 491 RSARAIMKTAMKYNL 505
+ +MK KYN+
Sbjct: 377 GAFNDVMKVKEKYNV 391
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 112 HIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGA 147
++ + FPVR D G E+ TGYR QH+ R P KG
Sbjct: 36 RVLIVEFPVRMDDGHVEVFTGYRVQHNVARGPAKGG 71
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 504 NLGHLDINAHACVTGKPINQGGIHGRISATGRGV 537
N+GH VTGKP+ GG GR ATGRGV
Sbjct: 163 NVGH---TVLGIVTGKPVELGGSKGREEATGRGV 193
>sp|Q56304|DHE3_THELI Glutamate dehydrogenase OS=Thermococcus litoralis GN=gdhA PE=1 SV=3
Length = 419
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 124/284 (43%), Gaps = 64/284 (22%)
Query: 223 HIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCA 282
I+E+S PV D G ++ TG+R Q++ R P KGGIR+ + + VKAL+A MT+K A
Sbjct: 36 RIVEVSIPVEMDDGSVKVFTGFRVQYNWARGPTKGGIRWHPEETLSTVKALAAWMTWKTA 95
Query: 283 CVDVPFGGAKAGIKINPKNYSE-------------------------------------- 304
+D+P+GG K G+ NPK S+
Sbjct: 96 VMDLPYGGGKGGVICNPKEMSDREKERLARGYVRAIYDVISPYTDIPAPDVYTNPQIMAW 155
Query: 305 --NELEKITRR----FTLELAKKGFIGEFKAVPGARAREGNVTFN-----LLFHYKFSS- 352
+E E I+RR F + K +G A A AR + T L K +
Sbjct: 156 MMDEYETISRRKDPSFGVITGKPPSVGGIVARMDATARGASYTVREAAKALGMDLKGKTI 215
Query: 353 -----GPVSMYLPQIWVQEKGKCPGLPTHTR----KPLALEE-----YKLDNGTIVGFPG 398
G Y+ +I +E G + T+ P L +K G++ FPG
Sbjct: 216 AIQGYGNAGYYMAKIMSEEYGMKVVAVSDTKGGIYNPDGLNADEVLAWKKKTGSVKDFPG 275
Query: 399 AVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAAN 442
A E L+ D+ P+A+E+VITK NA I+AKI+AE AN
Sbjct: 276 ATNITNEELLELEVDVLAPSAIEEVITKKNADNIKAKIVAELAN 319
Score = 40.0 bits (92), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 112 HIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKG 146
I+E+S PV D G ++ TG+R Q++ R P KG
Sbjct: 36 RIVEVSIPVEMDDGSVKVFTGFRVQYNWARGPTKG 70
>sp|Q9LEC8|DHEB_NICPL Glutamate dehydrogenase B OS=Nicotiana plumbaginifolia GN=GDHB PE=2
SV=1
Length = 411
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 124/280 (44%), Gaps = 64/280 (22%)
Query: 225 IEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACV 284
I++ + +D G G+R QH R P KGGIR+ +V DEV AL+ LMT+K A
Sbjct: 35 IKVECTIPKDDGSLATFIGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA 94
Query: 285 DVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP------------- 331
++P+GGAK GI +P + S +ELE++TR FT ++ IG VP
Sbjct: 95 NIPYGGAKGGIGCSPSDLSISELERLTRVFTQKIHD--LIGVHTDVPAPDMGTNPQTMAW 152
Query: 332 ------------------------GARAREGNVTFNLLF--------HYKFSSGP----- 354
G+ R+ +LF H K +G
Sbjct: 153 ILDEYSKFHGYSPAVVTGKPIDLGGSLGRDAATGRGVLFAAEALLRDHGKSIAGQRFVVQ 212
Query: 355 ----VSMYLPQIWVQEKGKCPGLPTHTR--------KPLALEEYKLDNGTIVGFPGAVPY 402
V + Q+ ++ GK + T +L ++ +N + GF GA
Sbjct: 213 GFGNVGSWAAQLITEQGGKIVAVSDITGAIKNKNGIDIASLLKHVKENRGVKGFHGADSI 272
Query: 403 EGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAAN 442
+ +++ E CD+ +PAA+ VI ++NA I+AK I EAAN
Sbjct: 273 DPNSILVEDCDVLIPAALGGVINRDNAKDIKAKFIVEAAN 312
Score = 37.4 bits (85), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 514 ACVTGKPINQGGIHGRISATGRGVFHGLENFIME 547
A VTGKPI+ GG GR +ATGRGV E + +
Sbjct: 166 AVVTGKPIDLGGSLGRDAATGRGVLFAAEALLRD 199
>sp|Q9HSM4|DHE42_HALSA NADP-specific glutamate dehydrogenase B OS=Halobacterium salinarum
(strain ATCC 700922 / JCM 11081 / NRC-1) GN=gdhB PE=3
SV=1
Length = 429
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 224 IIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCAC 283
++++S PV RD G + GYRAQH R P KGG+R+ VS +E LS MT+KCA
Sbjct: 51 VVQVSVPVERDDGTVTVYDGYRAQHDDVRGPYKGGLRYHPGVSAEECVGLSMWMTWKCAV 110
Query: 284 VDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
+D+PFGGAK G+ ++PK S +E E++TRRF EL + +G + +P
Sbjct: 111 MDLPFGGAKGGVVVDPKTLSADEHERLTRRFAAELRDE--VGPSQDIP 156
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 373 LPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKI 432
+P+H +P A+ + N E L+ D+ +PAAV VIT NA +I
Sbjct: 271 IPSHGNQPAAVMRHDAPNT----------LTNEELLELDVDVVIPAAVGNVITAANADRI 320
Query: 433 QAKIIAEAANESVQESLER 451
QA I+ E AN + +R
Sbjct: 321 QADIVVEGANGPTTSAADR 339
Score = 40.4 bits (93), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 113 IIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKG 146
++++S PV RD G + GYRAQH R P KG
Sbjct: 51 VVQVSVPVERDDGTVTVYDGYRAQHDDVRGPYKG 84
>sp|Q38946|DHE2_ARATH Glutamate dehydrogenase 2 OS=Arabidopsis thaliana GN=GDH2 PE=1 SV=1
Length = 411
Score = 105 bits (262), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 121/280 (43%), Gaps = 64/280 (22%)
Query: 225 IEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACV 284
I++ + +D G G+R QH R P KGGIR+ +V DEV AL+ LMT+K A
Sbjct: 35 IKVECTIPKDDGTLVSYIGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA 94
Query: 285 DVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP------------- 331
D+P+GGAK GI +P++ S +ELE++TR FT ++ IG VP
Sbjct: 95 DIPYGGAKGGIGCSPRDLSLSELERLTRVFTQKIHD--LIGIHTDVPAPDMGTNAQTMAW 152
Query: 332 ------------------------GARAREGNV-------TFNLLFHYKFSS-------- 352
G+ RE T LL Y S
Sbjct: 153 ILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVFATEALLAEYGKSIQGLTFVIQ 212
Query: 353 --GPVSMYLPQIWVQEKGKCPGLPTHT---RKPLALE-----EYKLDNGTIVGFPGAVPY 402
G V + ++ ++ GK + T R P ++ ++K G++ F G
Sbjct: 213 GFGNVGTWAAKLIHEKGGKVVAVSDITGAIRNPEGIDINALIKHKDATGSLNDFNGGDAM 272
Query: 403 EGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAAN 442
+ L+ CD+ +P A+ V+ K NA ++AK I EAAN
Sbjct: 273 NSDELLIHECDVLIPCALGGVLNKENAGDVKAKFIVEAAN 312
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 22/34 (64%)
Query: 514 ACVTGKPINQGGIHGRISATGRGVFHGLENFIME 547
A VTGKPI+ GG GR +ATGRGV E + E
Sbjct: 166 AVVTGKPIDLGGSLGREAATGRGVVFATEALLAE 199
>sp|P54386|DHE4_SYNY3 NADP-specific glutamate dehydrogenase OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=gdhA PE=3 SV=1
Length = 428
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
Query: 225 IEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACV 284
+ +S PVR D G +I GYR ++ R P KGG+R+ +V+ DEV++L+ MTFKCA +
Sbjct: 37 LSVSIPVRMDDGSLKIFPGYRVRYDDTRGPGKGGVRYHPNVTMDEVQSLAFWMTFKCALL 96
Query: 285 DVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIG 325
++PFGGAK GI +NPK S ELE+++R + +A FIG
Sbjct: 97 NLPFGGAKGGITLNPKELSRAELERLSRGYIEAIAD--FIG 135
Score = 37.0 bits (84), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 514 ACVTGKPINQGGIHGRISATGRGVFHGLENFI 545
A VTGKP+ GG GR +ATG G F+ ++ +
Sbjct: 169 AVVTGKPVTMGGSQGRNTATGTGAFYIMQGML 200
Score = 36.6 bits (83), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 407 LMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAAN 442
L+ D+ +PAA+E IT++NA +++A+ I E AN
Sbjct: 289 LLALDVDVLIPAALENQITRDNADQVRARYIFEVAN 324
Score = 34.7 bits (78), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 114 IEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGAT 148
+ +S PVR D G +I GYR ++ R P KG
Sbjct: 37 LSVSIPVRMDDGSLKIFPGYRVRYDDTRGPGKGGV 71
>sp|Q7A1B9|DHE2_STAAW NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain MW2) GN=gluD PE=3 SV=1
Length = 414
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 224 IIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCAC 283
++++ PVR D G + TGYRAQH+ P KGG+RF DV +EVKALS MT KC
Sbjct: 38 MLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTLKCGI 97
Query: 284 VDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
V++P+GG K GI +P+ S +E+E+++R + +++ F+G K +P
Sbjct: 98 VNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQ--FVGPNKDIP 143
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 412 CDIFVPAAVEKVITKNNAHKIQAKIIAEAAN 442
CDI VPAA+ IT++NAH I+A I+ EAAN
Sbjct: 286 CDILVPAAISNQITEDNAHDIKASIVVEAAN 316
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 113 IIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGAT 148
++++ PVR D G + TGYRAQH+ P KG
Sbjct: 38 MLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGV 73
>sp|Q6GAW8|DHE2_STAAS NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain MSSA476) GN=gluD PE=3 SV=1
Length = 414
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 224 IIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCAC 283
++++ PVR D G + TGYRAQH+ P KGG+RF DV +EVKALS MT KC
Sbjct: 38 MLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTLKCGI 97
Query: 284 VDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
V++P+GG K GI +P+ S +E+E+++R + +++ F+G K +P
Sbjct: 98 VNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQ--FVGPNKDIP 143
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 412 CDIFVPAAVEKVITKNNAHKIQAKIIAEAAN 442
CDI VPAA+ IT++NAH I+A I+ EAAN
Sbjct: 286 CDILVPAAISNQITEDNAHDIKASIVVEAAN 316
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 113 IIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGAT 148
++++ PVR D G + TGYRAQH+ P KG
Sbjct: 38 MLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGV 73
>sp|Q6GID0|DHE2_STAAR NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain MRSA252) GN=gluD PE=3 SV=1
Length = 414
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 224 IIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCAC 283
++++ PVR D G + TGYRAQH+ P KGG+RF DV +EVKALS MT KC
Sbjct: 38 MLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTLKCGI 97
Query: 284 VDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
V++P+GG K GI +P+ S +E+E+++R + +++ F+G K +P
Sbjct: 98 VNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQ--FVGPNKDIP 143
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 412 CDIFVPAAVEKVITKNNAHKIQAKIIAEAAN 442
CDI VPAA+ IT++NAH I+A I+ EAAN
Sbjct: 286 CDILVPAAISNQITEDNAHDIKASIVVEAAN 316
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 113 IIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGAT 148
++++ PVR D G + TGYRAQH+ P KG
Sbjct: 38 MLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGV 73
>sp|Q7A6H8|DHE2_STAAN NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain N315) GN=gluD PE=1 SV=1
Length = 414
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 224 IIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCAC 283
++++ PVR D G + TGYRAQH+ P KGG+RF DV +EVKALS MT KC
Sbjct: 38 MLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTLKCGI 97
Query: 284 VDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
V++P+GG K GI +P+ S +E+E+++R + +++ F+G K +P
Sbjct: 98 VNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQ--FVGPNKDIP 143
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 412 CDIFVPAAVEKVITKNNAHKIQAKIIAEAAN 442
CDI VPAA+ IT++NAH I+A I+ EAAN
Sbjct: 286 CDILVPAAISNQITEDNAHDIKASIVVEAAN 316
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 113 IIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGAT 148
++++ PVR D G + TGYRAQH+ P KG
Sbjct: 38 MLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGV 73
>sp|Q99VD0|DHE2_STAAM NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=gluD PE=1 SV=1
Length = 414
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 224 IIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCAC 283
++++ PVR D G + TGYRAQH+ P KGG+RF DV +EVKALS MT KC
Sbjct: 38 MLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTLKCGI 97
Query: 284 VDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
V++P+GG K GI +P+ S +E+E+++R + +++ F+G K +P
Sbjct: 98 VNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQ--FVGPNKDIP 143
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 412 CDIFVPAAVEKVITKNNAHKIQAKIIAEAAN 442
CDI VPAA+ IT++NAH I+A I+ EAAN
Sbjct: 286 CDILVPAAISNQITEDNAHDIKASIVVEAAN 316
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 113 IIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGAT 148
++++ PVR D G + TGYRAQH+ P KG
Sbjct: 38 MLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGV 73
>sp|Q5HHC7|DHE2_STAAC NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain COL) GN=gluD PE=3 SV=1
Length = 414
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 224 IIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCAC 283
++++ PVR D G + TGYRAQH+ P KGG+RF DV +EVKALS MT KC
Sbjct: 38 MLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTLKCGI 97
Query: 284 VDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
V++P+GG K GI +P+ S +E+E+++R + +++ F+G K +P
Sbjct: 98 VNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQ--FVGPNKDIP 143
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 412 CDIFVPAAVEKVITKNNAHKIQAKIIAEAAN 442
CDI VPAA+ IT++NAH I+A I+ EAAN
Sbjct: 286 CDILVPAAISNQITEDNAHDIKASIVVEAAN 316
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 113 IIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGAT 148
++++ PVR D G + TGYRAQH+ P KG
Sbjct: 38 MLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGV 73
>sp|O74024|DHE3_THEPR Glutamate dehydrogenase OS=Thermococcus profundus GN=gdhA PE=1 SV=1
Length = 419
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 65/109 (59%), Gaps = 2/109 (1%)
Query: 223 HIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCA 282
I+E+S P+ D G ++ TG+R QH+ R P KGGIR+ + VKAL+ MT+K A
Sbjct: 36 RIVEVSVPIEMDDGSVKVFTGFRVQHNWARGPTKGGIRWHPAETLSTVKALATWMTWKVA 95
Query: 283 CVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
VD+P+GG K GI +NPK SE E E++ R + A IG + +P
Sbjct: 96 VVDLPYGGGKGGIIVNPKELSEREQERLARAYI--RAVYDVIGPWTDIP 142
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 380 PLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAE 439
P + ++K ++G++ FPGA E L+ D+ PAA+E+VIT+ NA I+AKI+AE
Sbjct: 257 PDEVLKWKREHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVITEKNADNIKAKIVAE 316
Query: 440 AANESV 445
AN V
Sbjct: 317 VANGPV 322
Score = 41.2 bits (95), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 112 HIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKG 146
I+E+S P+ D G ++ TG+R QH+ R P KG
Sbjct: 36 RIVEVSVPIEMDDGSVKVFTGFRVQHNWARGPTKG 70
>sp|P50735|GUDB_BACSU Cryptic catabolic NAD-specific glutamate dehydrogenase GudB
OS=Bacillus subtilis (strain 168) GN=gudB PE=1 SV=2
Length = 427
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 70/112 (62%), Gaps = 5/112 (4%)
Query: 223 HIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSAL---MTF 279
++ + PVR D G +I TGYRAQH+ P KGGIRF +V+ EVKA+ AL M+
Sbjct: 47 RLLTVKIPVRMDDGSVKIFTGYRAQHNDSVGPTKGGIRFHPNVTEKEVKAVKALSIWMSL 106
Query: 280 KCACVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
KC +D+P+GG K GI +P++ S ELE+++R + +++ +G K VP
Sbjct: 107 KCGIIDLPYGGGKGGIVCDPRDMSFRELERLSRGYVRAISQ--IVGPTKDVP 156
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 28/38 (73%)
Query: 405 ENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAAN 442
+ L+ CDI VPAA+E IT+ NAH I+AKI+ EAAN
Sbjct: 292 QELLELDCDILVPAAIENQITEENAHNIRAKIVVEAAN 329
Score = 39.7 bits (91), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 112 HIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGA 147
++ + PVR D G +I TGYRAQH+ P KG
Sbjct: 47 RLLTVKIPVRMDDGSVKIFTGYRAQHNDSVGPTKGG 82
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 509 DINAHACVTGKPINQGGIHGRISATGRGV 537
+ N+ +TGKP+ GG HGR SAT +GV
Sbjct: 179 EFNSPGFITGKPLVLGGSHGRESATAKGV 207
>sp|O59650|DHE3_PYRKO Glutamate dehydrogenase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=gdhA PE=1 SV=4
Length = 421
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 224 IIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCAC 283
I+E+S PV D G ++ TG+R QH+ R P KGGIR+ + VKAL+ MT+K A
Sbjct: 37 IVEVSVPVEMDDGSVKVFTGFRVQHNWARGPTKGGIRWHPAETLSTVKALATWMTWKVAV 96
Query: 284 VDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
VD+P+GG K GI ++PK SE E E++ R + A IG + +P
Sbjct: 97 VDLPYGGGKGGIIVDPKKLSEREQERLARSYI--RAVYDVIGPWTDIP 142
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 385 EYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAANES 444
++K ++G++ PG E L+ DI P+A+E VITK NA ++AKI+AE AN
Sbjct: 264 KWKKEHGSVKDMPGTQNITNEELLELEVDILAPSAIEGVITKENADNVKAKIVAEVANGP 323
Query: 445 V 445
V
Sbjct: 324 V 324
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 113 IIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKG 146
I+E+S PV D G ++ TG+R QH+ R P KG
Sbjct: 37 IVEVSVPVEMDDGSVKVFTGFRVQHNWARGPTKG 70
>sp|P39633|DHE2_BACSU Catabolic NAD-specific glutamate dehydrogenase RocG OS=Bacillus
subtilis (strain 168) GN=rocG PE=1 SV=3
Length = 424
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 71/114 (62%), Gaps = 2/114 (1%)
Query: 218 MQPCDHIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALM 277
M+ ++ + PV+ D+G ++ TGYR+QH+ P KGG+RF +V+ +EVKALS M
Sbjct: 42 MKEPQRMLTVRIPVKMDNGSVKVFTGYRSQHNDAVGPTKGGVRFHPEVNEEEVKALSIWM 101
Query: 278 TFKCACVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
T KC ++P+GG K GI +P+ S ELE+++R + +++ +G K +P
Sbjct: 102 TLKCGIANLPYGGGKGGIICDPRTMSFGELERLSRGYVRAISQ--IVGPTKDIP 153
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 26/38 (68%)
Query: 405 ENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAAN 442
E L+ + CDI VPAA+ IT NAH IQA I+ EAAN
Sbjct: 289 EELLEKDCDILVPAAISNQITAKNAHNIQASIVVEAAN 326
Score = 37.4 bits (85), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 107 MQPCDHIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGA 147
M+ ++ + PV+ D+G ++ TGYR+QH+ P KG
Sbjct: 42 MKEPQRMLTVRIPVKMDNGSVKVFTGYRSQHNDAVGPTKGG 82
>sp|P52596|DHE3_VITVI Glutamate dehydrogenase OS=Vitis vinifera GN=GDH PE=2 SV=1
Length = 411
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Query: 225 IEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACV 284
I++ + +D G G+R QH R P KGGIR+ +V DEV AL+ LMT+K A V
Sbjct: 35 IKVECTIPKDDGSLATYVGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVV 94
Query: 285 DVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
D+P+GGAK GI PK+ S +ELE++TR FT ++ IG VP
Sbjct: 95 DIPYGGAKGGIGCTPKDLSMSELERLTRVFTQKIHD--LIGTHTDVP 139
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 19/153 (12%)
Query: 383 LEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAAN 442
L +K + G + F G + L+ CD+ +P A+ V+ K NA ++AK I EAAN
Sbjct: 253 LLRHKEETGCLTNFSGGDHMDPNELLTHECDVLIPCALGGVLNKENAADVKAKFIIEAAN 312
Query: 443 E----SVQESLERR--------FGNVGGRIPVTPSESFQKRISGASEKDIVHSGLDYTME 490
E L ++ + N GG + V+ E Q E++ V++ L M
Sbjct: 313 HPTDPEADEILSKKGGVILPDIYANAGG-VTVSYFEWVQNIQGFMWEEEKVNNELQKYMT 371
Query: 491 RSARAIMKTAMKYNLG------HLDINAHACVT 517
++ I +N L +N AC T
Sbjct: 372 KAFHNIKAMCQSHNCSLRMGAFTLAVNRVACAT 404
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 514 ACVTGKPINQGGIHGRISATGRGVFHGLENFIME 547
A VTGKPI GG GR +ATGRGV E + +
Sbjct: 166 AVVTGKPIALGGSLGREAATGRGVVFATEALLAQ 199
>sp|P80319|DHE3_PYRFU Glutamate dehydrogenase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=gdhA PE=1 SV=2
Length = 420
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 61/92 (66%)
Query: 223 HIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCA 282
I+E++ PV D G ++ TG+R QH+ R P KGGIR+ + + VKAL+A MT+K A
Sbjct: 36 RIVEVTIPVEMDDGSVKVFTGFRVQHNWARGPTKGGIRWHPEETLSTVKALAAWMTWKTA 95
Query: 283 CVDVPFGGAKAGIKINPKNYSENELEKITRRF 314
+D+P+GG K GI ++PK S+ E E++ R +
Sbjct: 96 VMDLPYGGGKGGIIVDPKKLSDREKERLARGY 127
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 385 EYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAANES 444
++K ++G++ FPGA E L+ D+ PAA+E+VITK NA I+AKI+AE AN
Sbjct: 263 KWKNEHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVITKKNADNIKAKIVAEVANGP 322
Query: 445 V 445
V
Sbjct: 323 V 323
Score = 40.8 bits (94), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 112 HIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKG 146
I+E++ PV D G ++ TG+R QH+ R P KG
Sbjct: 36 RIVEVTIPVEMDDGSVKVFTGFRVQHNWARGPTKG 70
Score = 32.7 bits (73), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 512 AHACVTGKPINQGGIHGRISATGRGVFHGLENFIMEANYMSMVGTT 557
A +TGKP++ GG GRI AT RG + + + ++ G T
Sbjct: 170 AFGIITGKPLSIGGSLGRIEATARGASYTIREAAKVLGWDTLKGKT 215
>sp|O04937|DHEA_NICPL Glutamate dehydrogenase A OS=Nicotiana plumbaginifolia GN=GDHA PE=2
SV=1
Length = 411
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 59/91 (64%)
Query: 225 IEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACV 284
I++ + +D G G+R QH R P KGGIR+ +V DEV AL+ LMT+K A
Sbjct: 35 IKVECTIPKDDGTLVSYVGFRVQHDNARGPMKGGIRYHPEVDLDEVNALAQLMTWKTAVA 94
Query: 285 DVPFGGAKAGIKINPKNYSENELEKITRRFT 315
D+P+GGAK GI PK+ S++ELE++TR FT
Sbjct: 95 DIPYGGAKGGIGCKPKDLSKSELERLTRVFT 125
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 382 ALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAA 441
AL +K G ++ F G + ++ CD+ +P A+ V+ + NA ++AK I EAA
Sbjct: 252 ALLNHKEATGKLIDFSGGDVMNSDEVLTHECDVLIPCALGGVLNRENADNVKAKFIIEAA 311
Query: 442 N 442
N
Sbjct: 312 N 312
Score = 39.3 bits (90), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 514 ACVTGKPINQGGIHGRISATGRGVFHGLENFIME 547
A VTGKPI+ GG GR +ATGRGV + E + E
Sbjct: 166 AIVTGKPIDLGGSLGREAATGRGVVYATEALLAE 199
>sp|Q47950|DHE3_PYRAB Glutamate dehydrogenase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=gdhA PE=3 SV=2
Length = 420
Score = 92.4 bits (228), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 61/92 (66%)
Query: 223 HIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCA 282
I+E++ PV D G ++ TG+R Q++ R P KGGIR+ + + VKAL+A MT+K A
Sbjct: 36 RIVEVTIPVEMDDGSVKVFTGFRVQYNWARGPTKGGIRWHPEETLSTVKALAAWMTWKTA 95
Query: 283 CVDVPFGGAKAGIKINPKNYSENELEKITRRF 314
+D+P+GG K GI ++PK S+ E E++ R +
Sbjct: 96 VMDLPYGGGKGGIIVDPKKLSDREKERLARGY 127
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 385 EYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAANES 444
++K ++G++ FPGA E L+ D+ PAA+E+VITK NA I+AKI+AE AN
Sbjct: 263 KWKREHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVITKKNADNIKAKIVAEVANGP 322
Query: 445 V 445
V
Sbjct: 323 V 323
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 112 HIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKG 146
I+E++ PV D G ++ TG+R Q++ R P KG
Sbjct: 36 RIVEVTIPVEMDDGSVKVFTGFRVQYNWARGPTKG 70
>sp|P0CL72|DHE3_PYRHR Glutamate dehydrogenase OS=Pyrococcus horikoshii GN=gdhA PE=3 SV=1
Length = 420
Score = 92.4 bits (228), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 61/92 (66%)
Query: 223 HIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCA 282
I+E++ PV D G ++ TG+R Q++ R P KGGIR+ + + VKAL+A MT+K A
Sbjct: 36 RIVEVTIPVEMDDGSVKVFTGFRVQYNWARGPTKGGIRWHPEETLSTVKALAAWMTWKTA 95
Query: 283 CVDVPFGGAKAGIKINPKNYSENELEKITRRF 314
+D+P+GG K GI ++PK S+ E E++ R +
Sbjct: 96 VMDLPYGGGKGGIIVDPKKLSDREKERLARGY 127
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 385 EYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAANES 444
++K ++G++ FPGA E L+ D+ PAA+E+VITK NA I+AKI+AE AN
Sbjct: 263 KWKREHGSVKDFPGATNISNEELLELDVDVLAPAAIEEVITKKNADNIKAKIVAEVANGP 322
Query: 445 V 445
V
Sbjct: 323 V 323
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 112 HIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKG 146
I+E++ PV D G ++ TG+R Q++ R P KG
Sbjct: 36 RIVEVTIPVEMDDGSVKVFTGFRVQYNWARGPTKG 70
>sp|P0CL73|DHE3_PYRHO Glutamate dehydrogenase OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=gdhA PE=3 SV=1
Length = 420
Score = 92.4 bits (228), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 61/92 (66%)
Query: 223 HIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCA 282
I+E++ PV D G ++ TG+R Q++ R P KGGIR+ + + VKAL+A MT+K A
Sbjct: 36 RIVEVTIPVEMDDGSVKVFTGFRVQYNWARGPTKGGIRWHPEETLSTVKALAAWMTWKTA 95
Query: 283 CVDVPFGGAKAGIKINPKNYSENELEKITRRF 314
+D+P+GG K GI ++PK S+ E E++ R +
Sbjct: 96 VMDLPYGGGKGGIIVDPKKLSDREKERLARGY 127
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 385 EYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAANES 444
++K ++G++ FPGA E L+ D+ PAA+E+VITK NA I+AKI+AE AN
Sbjct: 263 KWKREHGSVKDFPGATNISNEELLELDVDVLAPAAIEEVITKKNADNIKAKIVAEVANGP 322
Query: 445 V 445
V
Sbjct: 323 V 323
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 112 HIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKG 146
I+E++ PV D G ++ TG+R Q++ R P KG
Sbjct: 36 RIVEVTIPVEMDDGSVKVFTGFRVQYNWARGPTKG 70
>sp|Q47951|DHE3_PYREN Glutamate dehydrogenase OS=Pyrococcus endeavori GN=gdhA PE=1 SV=1
Length = 420
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 61/92 (66%)
Query: 223 HIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCA 282
I+E++ PV D G ++ TG+R Q++ R P KGGIR+ + + VKAL+A MT+K A
Sbjct: 36 RIVEVTIPVEMDDGTVKVFTGFRVQYNWARGPTKGGIRWHPEETLSTVKALAAWMTWKTA 95
Query: 283 CVDVPFGGAKAGIKINPKNYSENELEKITRRF 314
+D+P+GG K GI ++PK S+ E E++ R +
Sbjct: 96 VMDLPYGGGKGGIIVDPKKLSDREKERLARGY 127
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 385 EYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAANES 444
++K ++G++ FPGA E L+ D+ PAA+E+VITK NA I+AKI+AE AN
Sbjct: 263 KWKQEHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVITKKNADNIKAKIVAEVANGP 322
Query: 445 V 445
V
Sbjct: 323 V 323
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 112 HIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKG 146
I+E++ PV D G ++ TG+R Q++ R P KG
Sbjct: 36 RIVEVTIPVEMDDGTVKVFTGFRVQYNWARGPTKG 70
>sp|Q53199|DHE3_RHISN Probable glutamate dehydrogenase OS=Rhizobium sp. (strain NGR234)
GN=NGR_a01340 PE=3 SV=1
Length = 443
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 65/101 (64%), Gaps = 2/101 (1%)
Query: 221 CDHIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFK 280
C+ + F VR Y I G+R+ H P KG IR++ + +EV+AL+ALMT K
Sbjct: 17 CNSPYTVRFGVRLRGRMYSFI-GWRSVRE-HCEPVKGDIRYASNADAEEVEALAALMTLK 74
Query: 281 CACVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKK 321
C+ VDVPFGG+K +KI+P+ ++ ELE ITRRFT E+ K+
Sbjct: 75 CSLVDVPFGGSKGALKIDPRGWTPQELEHITRRFTQEMNKR 115
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 382 ALEEYKLDNGTIVGFPGAVPYEGENLMYE-PCDIFVPAAVEKVITKNNAHKIQAKIIAEA 440
AL+++++ G+I+GF GA G+ E PCD+ +PAA+E I NA +++A ++ EA
Sbjct: 249 ALKQHQIRTGSILGFDGAKSIAGDMCGVEQPCDVLIPAAMENAIHAENAERMKAHLVVEA 308
Query: 441 ANESV 445
AN V
Sbjct: 309 ANGPV 313
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 7/54 (12%)
Query: 510 INAHACVTGKPINQGGIHGRISATGRGVFHGLENFIMEANYMSMVGTTPGWGGK 563
+ + ACVTGKP+++GGI GR +TGRGV +++ + + TPG G+
Sbjct: 151 VTSGACVTGKPLSKGGIAGRAESTGRGVQFAIQSSLRDTR-------TPGLDGR 197
>sp|P27346|DHE2_CLODI NAD-specific glutamate dehydrogenase OS=Clostridium difficile
GN=gluD PE=3 SV=1
Length = 421
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 76/124 (61%), Gaps = 10/124 (8%)
Query: 216 LGMQPCDH--------IIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSR 267
LGM+P + +IE+S PV+ D G + G+R+QH+ P KGGIRF +VSR
Sbjct: 23 LGMEPAVYELLKEPMRVIEVSIPVKMDDGSIKTFKGFRSQHNDAVGPTKGGIRFHQNVSR 82
Query: 268 DEVKALSALMTFKCACVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEF 327
DEVKALS MTFKC+ +P+GG K GI ++P S+ ELE+++R + + K IGE
Sbjct: 83 DEVKALSIWMTFKCSVTGIPYGGGKGGIIVDPSTLSQGELERLSRGYIDGIYK--LIGEK 140
Query: 328 KAVP 331
VP
Sbjct: 141 VDVP 144
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 338 GNV-TFNLLFHYKFSSGPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGF 396
GNV ++ +L K V+M W + +G + A+ +Y ++G ++ F
Sbjct: 221 GNVGSYTVLNCEKLGGTVVAM---AEWCKSEGSYAIYNENGLDGQAMLDYMKEHGNLLNF 277
Query: 397 PGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAANESVQESLERRFGNV 456
PGA E DI +PAA+E ITK A I+AK++ EAAN + F
Sbjct: 278 PGAKRISLEEFWASDVDIVIPAALENSITKEVAESIKAKLVCEAANGPTTPEADEVFAER 337
Query: 457 GGRIPVTP 464
G I +TP
Sbjct: 338 G--IVLTP 343
Score = 39.3 bits (90), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 8/50 (16%)
Query: 105 LGMQPCDH--------IIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKG 146
LGM+P + +IE+S PV+ D G + G+R+QH+ P KG
Sbjct: 23 LGMEPAVYELLKEPMRVIEVSIPVKMDDGSIKTFKGFRSQHNDAVGPTKG 72
>sp|P80053|DHE2_SULSO Glutamate dehydrogenase 2 OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=gdhA-2 PE=1 SV=3
Length = 420
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 74/113 (65%), Gaps = 3/113 (2%)
Query: 219 QPCDHIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMT 278
QP + II++ +R G + G+R+QH++ P KGG+R+ +V++DEV+ALS +MT
Sbjct: 37 QP-ERIIQVKIQIRGSDGKLKTFMGWRSQHNSALGPYKGGVRYHPNVTQDEVEALSMIMT 95
Query: 279 FKCACVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
+K + + +P+GG K G++++PK + ELE+++R++ + K ++G +P
Sbjct: 96 WKNSLLLLPYGGGKGGVRVDPKKLTREELEQLSRKYIQAIYK--YLGSELDIP 146
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 385 EYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAAN 442
E K G+++ +P E L+ CDI +PAA+E VI K NA K++AK+I E AN
Sbjct: 263 EIKEKTGSVINYPEGRKVTNEELLISDCDILIPAALENVINKFNAPKVKAKLIVEGAN 320
>sp|P28997|DHE2_PEPAS NAD-specific glutamate dehydrogenase OS=Peptostreptococcus
asaccharolyticus PE=1 SV=1
Length = 421
Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 16/161 (9%)
Query: 223 HIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCA 282
+IEIS PV+ D G ++ G+R+ HS+ P KGG+RF +V+ DEVKALS MTFK
Sbjct: 37 RVIEISIPVKMDDGTVKVFKGWRSAHSSAVGPSKGGVRFHPNVNMDEVKALSLWMTFKGG 96
Query: 283 CVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVPGARAREGNVTF 342
+ +P+GG K GI ++P SE ELE+++R + L K ++G+ +P
Sbjct: 97 ALGLPYGGGKGGICVDPAELSERELEQLSRGWVRGLYK--YLGDRIDIPAPDVN------ 148
Query: 343 NLLFHYKFSSGPVSMYLPQIWVQEKGKCPGLPTHTRKPLAL 383
++G + + +V+ G+ + T T KP+A
Sbjct: 149 --------TNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAF 181
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 35/60 (58%)
Query: 383 LEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAAN 442
L YK N T++GFPGA E + DI VPAA+E VIT A I AK++ EAAN
Sbjct: 264 LLAYKEANKTLIGFPGAERITDEEFWTKEYDIIVPAALENVITGERAKTINAKLVCEAAN 323
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 112 HIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGAT 148
+IEIS PV+ D G ++ G+R+ HS+ P KG
Sbjct: 37 RVIEISIPVKMDDGTVKVFKGWRSAHSSAVGPSKGGV 73
>sp|P93541|DHE3_SOLLC Glutamate dehydrogenase OS=Solanum lycopersicum GN=GDH1 PE=2 SV=1
Length = 412
Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 225 IEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACV 284
I++ + +D G G+R QH R P KGGIR+ +V DEV AL+ LMT+K A
Sbjct: 35 IKVECTIPKDDGTLASFVGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA 94
Query: 285 DVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
++P+GGAK GI +P + S +ELE++TR FT ++ IG VP
Sbjct: 95 NIPYGGAKGGIGCSPSDLSISELERLTRVFTQKIHD--LIGIHTDVP 139
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 393 IVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAH-KIQAKIIAEAAN 442
+ GF A P + +++ E CD+ +PAA+ VI K+N KI+AK I EAAN
Sbjct: 263 VKGFHDAHPIDANSILVEDCDVLIPAALGGVINKDNHKLKIKAKYIIEAAN 313
Score = 36.2 bits (82), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 514 ACVTGKPINQGGIHGRISATGRGVFHGLENFIME 547
A VTGKP++ GG GR +ATGRG E + E
Sbjct: 166 AVVTGKPVDLGGSLGRDAATGRGALFATEALLNE 199
>sp|Q43260|DHE3_MAIZE Glutamate dehydrogenase OS=Zea mays GN=GDH1 PE=1 SV=1
Length = 411
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%)
Query: 225 IEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACV 284
I++ + +D G G+R QH R P KGGIR+ +V DEV AL+ LMT+K A
Sbjct: 35 IKVECTIPKDDGTLASYVGFRVQHDNARGPMKGGIRYHHEVDPDEVNALAQLMTWKTAVA 94
Query: 285 DVPFGGAKAGIKINPKNYSENELEKITRRFT 315
++P+GGAK GI +P + S +ELE++TR FT
Sbjct: 95 NIPYGGAKGGIGCSPGDLSISELERLTRVFT 125
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 383 LEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAAN 442
L ++ +N I GF G ++L+ E CD+ +PAA+ VI K+NA+ I+AK I EAAN
Sbjct: 253 LVKHSAENKGIKGFKGGDAIAPDSLLTEECDVLIPAALGGVINKDNANDIKAKYIIEAAN 312
Score = 38.9 bits (89), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 514 ACVTGKPINQGGIHGRISATGRGVFHGLENFIMEANYMSMVGTTPGWGGKTFIVQ 568
A VTGKP++ GG GR +ATGRGV E + E G G+ F++Q
Sbjct: 166 AVVTGKPVDLGGSLGRDAATGRGVLFATEALLAEHG--------KGIAGQRFVIQ 212
>sp|P39475|DHE4_SULSH NADP-specific glutamate dehydrogenase (Fragment) OS=Sulfolobus
shibatae GN=gdhA PE=3 SV=1
Length = 390
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 219 QPCDHIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMT 278
QP + +I++ +R G + G+R+QH++ P KGG+R+S +V++DEV ALS +MT
Sbjct: 9 QP-ERVIQVKIQIRGSDGKLKTFMGWRSQHNSALGPYKGGVRYSPNVTQDEVIALSMIMT 67
Query: 279 FKCACVDVPFGGAKAGIKINPKNYSENELEKITRRFT 315
+K + + +P+GG K GI+++PK + ELE ++R++
Sbjct: 68 WKNSLLLLPYGGGKGGIRVDPKKLTLKELEDLSRKYV 104
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 391 GTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAAN 442
G++V +P E L+ CDI +PAAVE VI K NA K++AK+I E AN
Sbjct: 241 GSVVNYPEGKKVTNEELLTSDCDILIPAAVENVINKFNAPKVKAKLIVEGAN 292
>sp|Q9S7A0|DHE3_ARATH Probable glutamate dehydrogenase 3 OS=Arabidopsis thaliana GN=GSH3
PE=1 SV=1
Length = 411
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%)
Query: 225 IEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACV 284
I++ + +D G G+R QH R P KGGIR+ +V DEV AL+ LMT+K A
Sbjct: 35 IKVECTIPKDDGTLASFVGFRVQHDNARGPMKGGIRYHPEVEPDEVNALAQLMTWKTAVA 94
Query: 285 DVPFGGAKAGIKINPKNYSENELEKITRRFT 315
+P+GGAK GI +P S +ELE++TR FT
Sbjct: 95 KIPYGGAKGGIGCDPSELSLSELERLTRVFT 125
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 381 LALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEA 440
L+L E+ +N I GF GA + ++++ E CDI VPAA+ VI + NA++I+AK I E
Sbjct: 251 LSLLEHAEENRGIKGFDGADSIDPDSILVEDCDILVPAALGGVINRENANEIKAKFIIEG 310
Query: 441 AN 442
AN
Sbjct: 311 AN 312
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 22/34 (64%)
Query: 514 ACVTGKPINQGGIHGRISATGRGVFHGLENFIME 547
A VTGKPI+ GG GR +ATGRGV E + E
Sbjct: 166 AVVTGKPIDLGGSLGRDAATGRGVLFATEALLNE 199
>sp|Q43314|DHE1_ARATH Glutamate dehydrogenase 1 OS=Arabidopsis thaliana GN=GDH1 PE=1 SV=1
Length = 411
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%)
Query: 225 IEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACV 284
I++ + +D G G+R QH R P KGGIR+ +V DEV AL+ LMT+K A
Sbjct: 35 IKVECTIPKDDGTLASFVGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA 94
Query: 285 DVPFGGAKAGIKINPKNYSENELEKITRRFT 315
+P+GGAK GI +P S +ELE++TR FT
Sbjct: 95 KIPYGGAKGGIGCDPSKLSISELERLTRVFT 125
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 382 ALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAA 441
AL ++ ++ + GF GA P + +++ E CDI VPAA+ VI + NA++I+AK I EAA
Sbjct: 252 ALLKHTKEHRGVKGFDGADPIDPNSILVEDCDILVPAALGGVINRENANEIKAKFIIEAA 311
Query: 442 NE----SVQESLERR--------FGNVGGRIPVTPSESFQKRISGASEKDIVHSGLDYTM 489
N E L ++ + N GG + V+ E Q E++ V+ L M
Sbjct: 312 NHPTDPDADEILSKKGVVILPDIYANSGG-VTVSYFEWVQNIQGFMWEEEKVNDELKTYM 370
Query: 490 ERS 492
RS
Sbjct: 371 TRS 373
Score = 40.4 bits (93), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 514 ACVTGKPINQGGIHGRISATGRGVFHGLENFIME 547
A VTGKPI+ GG GR +ATGRGV G E + E
Sbjct: 166 AVVTGKPIDLGGSLGRDAATGRGVMFGTEALLNE 199
>sp|Q9YC65|DHE3_AERPE Glutamate dehydrogenase OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=gdhA PE=3
SV=2
Length = 418
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 61/93 (65%)
Query: 222 DHIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKC 281
D ++++ ++ D G + G+R+QH++ P KGG+R+ +V+ +EV ALS MT+K
Sbjct: 35 DRVLQVRVTIKMDDGTVKTFLGWRSQHNSALGPYKGGVRYHPNVTMNEVIALSMWMTWKN 94
Query: 282 ACVDVPFGGAKAGIKINPKNYSENELEKITRRF 314
+ +P+GG K G+++NPK S ELE ++R++
Sbjct: 95 SLAGLPYGGGKGGVRVNPKILSPRELELLSRKY 127
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 387 KLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKIQAKIIAEAANESVQ 446
K GT+ + ++ P DI VPAA+E+VIT NA +I+AKII+E AN
Sbjct: 261 KRSTGTVANYQRGKKISTMEILELPVDILVPAAIEEVITDENADRIKAKIISEGANGPTT 320
Query: 447 ESLER 451
+ E+
Sbjct: 321 TAAEK 325
>sp|P94598|DHE3_BACTN Glutamate dehydrogenase OS=Bacteroides thetaiotaomicron (strain
ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
GN=gdhA PE=3 SV=2
Length = 444
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 222 DHIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKC 281
D + + D G+ + GYR QH+ P KGGIRF V+ +K L+ TFK
Sbjct: 54 DRVFQFRVTWMDDKGNIQTNMGYRVQHNNAIGPYKGGIRFHASVNLSILKFLAFEQTFKN 113
Query: 282 ACVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVPGARAREGNVT 341
+ +P GG K G +P+ S E+ + + F LEL + IG VP G
Sbjct: 114 SLTTLPMGGGKGGSDFSPRGKSNAEVMRFVQAFMLELWRH--IGPETDVPAGDIGVGGRE 171
Query: 342 FNLLF 346
+F
Sbjct: 172 VGFMF 176
>sp|P95544|DHE4_PRERU NAD(P)-specific glutamate dehydrogenase OS=Prevotella ruminicola
GN=gdhA PE=1 SV=1
Length = 444
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
Query: 222 DHIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKC 281
D I++ D+G+ + GYR QH+ P KGG+RF V+ +K L+ TFK
Sbjct: 54 DRILQFRVSWVDDNGNVQTNLGYRVQHNNAIGPYKGGLRFHKSVNASILKFLAFEQTFKN 113
Query: 282 ACVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVPGARAREGNVT 341
+ +P GGAK G +P S+ E+ + + F EL + IG + VP G
Sbjct: 114 SLTTLPMGGAKGGSDFDPHGKSDMEVMRFCQAFMNELYR--LIGPDEDVPAGDIGVGGRE 171
Query: 342 FNLLF-HYK 349
+F YK
Sbjct: 172 VGYMFGQYK 180
>sp|P0C934|DHE2_PORGI NAD-specific glutamate dehydrogenase OS=Porphyromonas gingivalis
(strain ATCC BAA-308 / W83) GN=gdh PE=1 SV=1
Length = 445
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 59/137 (43%), Gaps = 6/137 (4%)
Query: 212 RGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVK 271
GI+ + D + P D G ++ GYR Q + P KGGIRF V+ +K
Sbjct: 44 NGIIERIVEPDRVFTFRVPWVDDQGKVQVNIGYRVQFNNAIGPYKGGIRFHPSVNLSILK 103
Query: 272 ALSALMTFKCACVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331
L FK A +P GG K G +PK SE E+ + + F EL + IG +P
Sbjct: 104 FLGFEQMFKNALTTLPMGGGKGGADFSPKGKSEAEIMRFCQSFMTELWRN--IGPDTDIP 161
Query: 332 ----GARAREGNVTFNL 344
G RE F +
Sbjct: 162 AGDIGVGGREVGYMFGM 178
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 215,102,685
Number of Sequences: 539616
Number of extensions: 9306578
Number of successful extensions: 19900
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 19556
Number of HSP's gapped (non-prelim): 335
length of query: 568
length of database: 191,569,459
effective HSP length: 123
effective length of query: 445
effective length of database: 125,196,691
effective search space: 55712527495
effective search space used: 55712527495
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)