Query psy8846
Match_columns 568
No_of_seqs 376 out of 2233
Neff 5.6
Searched_HMMs 29240
Date Fri Aug 16 20:37:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8846.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8846hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mw9_A GDH 1, glutamate dehydr 100.0 1.4E-89 4.6E-94 741.4 30.2 359 168-530 2-499 (501)
2 3k92_A NAD-GDH, NAD-specific g 100.0 1E-84 3.4E-89 695.4 24.8 333 172-530 14-424 (424)
3 3r3j_A Glutamate dehydrogenase 100.0 1.3E-83 4.4E-88 689.7 24.4 340 171-530 29-456 (456)
4 3aog_A Glutamate dehydrogenase 100.0 6.1E-83 2.1E-87 685.0 28.8 351 153-530 11-439 (440)
5 2bma_A Glutamate dehydrogenase 100.0 5.9E-81 2E-85 671.9 25.7 340 171-530 42-470 (470)
6 4fcc_A Glutamate dehydrogenase 100.0 7.2E-81 2.5E-85 668.8 24.1 341 171-530 23-450 (450)
7 3aoe_E Glutamate dehydrogenase 100.0 2.9E-80 1E-84 661.6 27.2 331 171-530 10-418 (419)
8 2yfq_A Padgh, NAD-GDH, NAD-spe 100.0 1.6E-80 5.5E-85 664.8 24.8 333 173-530 5-421 (421)
9 2tmg_A Protein (glutamate dehy 100.0 3.4E-79 1.2E-83 653.1 27.8 334 172-530 2-414 (415)
10 1v9l_A Glutamate dehydrogenase 100.0 2.5E-79 8.5E-84 654.8 20.9 334 172-530 3-421 (421)
11 1bgv_A Glutamate dehydrogenase 100.0 9.4E-78 3.2E-82 646.2 23.7 343 171-530 17-448 (449)
12 1gtm_A Glutamate dehydrogenase 100.0 2.5E-69 8.7E-74 579.1 26.6 334 172-530 2-417 (419)
13 1c1d_A L-phenylalanine dehydro 100.0 1.8E-55 6.2E-60 462.5 20.9 266 240-526 22-351 (355)
14 1leh_A Leucine dehydrogenase; 100.0 1.8E-54 6.3E-59 456.7 20.8 274 241-537 25-360 (364)
15 3mw9_A GDH 1, glutamate dehydr 100.0 4.9E-37 1.7E-41 332.0 6.8 157 57-224 2-164 (501)
16 3aog_A Glutamate dehydrogenase 100.0 2.4E-30 8.1E-35 277.9 4.5 150 44-224 13-166 (440)
17 3k92_A NAD-GDH, NAD-specific g 100.0 2.5E-29 8.4E-34 268.7 5.7 136 60-224 13-152 (424)
18 3r3j_A Glutamate dehydrogenase 99.9 1E-29 3.5E-34 272.9 1.5 140 59-224 28-171 (456)
19 4fcc_A Glutamate dehydrogenase 99.9 8.5E-29 2.9E-33 265.9 3.6 142 59-224 22-167 (450)
20 2bma_A Glutamate dehydrogenase 99.9 5.4E-29 1.9E-33 268.4 0.1 140 59-224 41-184 (470)
21 3aoe_E Glutamate dehydrogenase 99.9 4.4E-28 1.5E-32 259.2 4.2 137 59-224 9-149 (419)
22 1bgv_A Glutamate dehydrogenase 99.9 8.5E-28 2.9E-32 258.6 3.4 142 59-224 16-161 (449)
23 2yfq_A Padgh, NAD-GDH, NAD-spe 99.9 2.1E-27 7.1E-32 254.4 5.9 134 62-224 5-142 (421)
24 2tmg_A Protein (glutamate dehy 99.9 8.1E-27 2.8E-31 249.3 5.0 135 61-224 2-140 (415)
25 1gtm_A Glutamate dehydrogenase 99.9 1.8E-26 6E-31 247.5 5.0 135 61-224 2-140 (419)
26 1v9l_A Glutamate dehydrogenase 99.9 3E-26 1E-30 245.2 4.4 136 60-224 2-141 (421)
27 1c1d_A L-phenylalanine dehydro 99.5 3.3E-15 1.1E-19 157.0 -1.8 94 109-220 9-112 (355)
28 1leh_A Leucine dehydrogenase; 99.4 2.6E-14 8.9E-19 150.7 0.2 91 109-220 11-109 (364)
29 4gbj_A 6-phosphogluconate dehy 90.9 0.86 3E-05 45.9 9.7 147 353-513 14-205 (297)
30 3n58_A Adenosylhomocysteinase; 89.2 0.42 1.5E-05 51.6 5.9 80 353-444 256-337 (464)
31 3h9u_A Adenosylhomocysteinase; 86.6 0.95 3.3E-05 48.6 6.7 81 353-445 220-302 (436)
32 3gvp_A Adenosylhomocysteinase 85.5 0.91 3.1E-05 48.8 5.8 81 353-445 229-311 (435)
33 3obb_A Probable 3-hydroxyisobu 85.2 1.3 4.3E-05 44.9 6.6 145 353-513 12-204 (300)
34 3llv_A Exopolyphosphatase-rela 85.2 0.58 2E-05 40.9 3.6 93 353-452 15-115 (141)
35 2o4c_A Erythronate-4-phosphate 83.7 1.8 6.1E-05 45.6 7.0 87 353-455 125-223 (380)
36 4e5n_A Thermostable phosphite 83.2 1.7 5.9E-05 44.6 6.6 90 353-454 154-251 (330)
37 2pi1_A D-lactate dehydrogenase 82.6 1.3 4.6E-05 45.6 5.5 89 353-455 150-246 (334)
38 3d64_A Adenosylhomocysteinase; 81.4 1.4 4.8E-05 48.0 5.3 81 353-445 286-368 (494)
39 3fwz_A Inner membrane protein 80.3 1.2 4E-05 39.3 3.6 104 353-467 16-128 (140)
40 2j6i_A Formate dehydrogenase; 80.2 2.4 8.2E-05 44.1 6.4 90 353-454 173-272 (364)
41 3g0o_A 3-hydroxyisobutyrate de 80.1 4.7 0.00016 40.1 8.3 92 353-456 16-119 (303)
42 2w2k_A D-mandelate dehydrogena 79.7 4 0.00014 42.1 7.9 91 353-455 172-272 (348)
43 1v8b_A Adenosylhomocysteinase; 79.5 1.4 4.9E-05 47.8 4.5 87 353-451 266-357 (479)
44 2ekl_A D-3-phosphoglycerate de 79.3 2.4 8.1E-05 43.1 5.9 90 353-455 151-248 (313)
45 1wwk_A Phosphoglycerate dehydr 79.2 1.9 6.5E-05 43.7 5.2 89 353-454 151-247 (307)
46 3jtm_A Formate dehydrogenase, 79.0 5 0.00017 41.6 8.4 90 353-454 173-271 (351)
47 4huj_A Uncharacterized protein 78.8 2.3 8E-05 40.4 5.4 91 353-454 32-140 (220)
48 2d0i_A Dehydrogenase; structur 78.4 1.8 6.1E-05 44.5 4.7 89 353-454 155-250 (333)
49 1mx3_A CTBP1, C-terminal bindi 78.0 2.5 8.4E-05 43.8 5.7 90 353-455 177-275 (347)
50 1ygy_A PGDH, D-3-phosphoglycer 76.3 4.6 0.00016 44.1 7.5 89 353-454 151-247 (529)
51 1yqg_A Pyrroline-5-carboxylate 74.8 7.2 0.00024 37.5 7.7 90 353-455 9-102 (263)
52 2h78_A Hibadh, 3-hydroxyisobut 74.3 5.2 0.00018 39.5 6.7 92 353-456 12-114 (302)
53 4e21_A 6-phosphogluconate dehy 74.3 3.5 0.00012 42.7 5.6 92 353-457 31-133 (358)
54 2rir_A Dipicolinate synthase, 74.1 4.9 0.00017 40.1 6.5 80 353-444 166-249 (300)
55 2g76_A 3-PGDH, D-3-phosphoglyc 73.9 3.8 0.00013 42.2 5.7 89 353-454 174-270 (335)
56 3d1l_A Putative NADP oxidoredu 73.8 4.2 0.00014 39.4 5.7 81 353-444 19-105 (266)
57 2d5c_A AROE, shikimate 5-dehyd 73.5 14 0.00047 35.9 9.5 99 353-465 125-228 (263)
58 3d4o_A Dipicolinate synthase s 72.6 5.4 0.00019 39.7 6.4 80 353-444 164-247 (293)
59 2gcg_A Glyoxylate reductase/hy 72.0 3.9 0.00013 41.7 5.3 90 353-454 164-261 (330)
60 3ond_A Adenosylhomocysteinase; 71.8 7.3 0.00025 42.4 7.5 79 353-443 274-354 (488)
61 3l6d_A Putative oxidoreductase 71.6 4 0.00014 40.8 5.2 80 353-444 18-104 (306)
62 4dll_A 2-hydroxy-3-oxopropiona 71.3 5.1 0.00017 40.4 5.9 145 353-514 40-231 (320)
63 3ce6_A Adenosylhomocysteinase; 71.1 4 0.00014 44.4 5.4 79 353-443 283-363 (494)
64 1gdh_A D-glycerate dehydrogena 71.0 4.4 0.00015 41.3 5.4 90 353-454 155-253 (320)
65 3gt0_A Pyrroline-5-carboxylate 70.6 6.2 0.00021 37.9 6.1 89 353-453 11-109 (247)
66 3c24_A Putative oxidoreductase 70.2 5.4 0.00018 39.2 5.7 79 353-444 21-104 (286)
67 2nac_A NAD-dependent formate d 70.1 13 0.00043 39.3 8.7 91 353-455 200-299 (393)
68 1zmo_A Halohydrin dehalogenase 69.8 8.4 0.00029 36.6 6.8 62 353-420 11-81 (244)
69 3oet_A Erythronate-4-phosphate 69.1 8.3 0.00028 40.6 7.1 87 353-455 128-226 (381)
70 1lss_A TRK system potassium up 67.6 15 0.00051 31.0 7.3 92 353-450 13-112 (140)
71 2dbq_A Glyoxylate reductase; D 67.5 5.6 0.00019 40.6 5.3 90 353-455 159-256 (334)
72 3ing_A Homoserine dehydrogenas 67.3 5.9 0.0002 40.6 5.4 66 353-422 13-93 (325)
73 3gg9_A D-3-phosphoglycerate de 67.2 6.8 0.00023 40.6 5.9 80 353-445 169-255 (352)
74 3pdu_A 3-hydroxyisobutyrate de 66.5 3.9 0.00013 40.2 3.8 147 353-516 10-205 (287)
75 2zyd_A 6-phosphogluconate dehy 66.4 6.9 0.00024 42.1 6.0 152 353-514 24-228 (480)
76 3b1f_A Putative prephenate deh 66.3 11 0.00038 36.8 7.1 90 353-453 15-115 (290)
77 1z82_A Glycerol-3-phosphate de 65.4 15 0.00051 36.9 7.9 84 353-443 23-113 (335)
78 1nyt_A Shikimate 5-dehydrogena 65.0 33 0.0011 33.5 10.2 84 353-445 128-218 (271)
79 2cvz_A Dehydrogenase, 3-hydrox 64.6 8 0.00027 37.5 5.6 90 353-455 10-106 (289)
80 3doj_A AT3G25530, dehydrogenas 64.1 5 0.00017 40.2 4.0 149 353-516 30-225 (310)
81 3pef_A 6-phosphogluconate dehy 64.0 4.6 0.00016 39.7 3.8 92 353-456 10-112 (287)
82 3rwb_A TPLDH, pyridoxal 4-dehy 63.9 3.7 0.00013 39.4 3.0 35 353-390 16-50 (247)
83 1xdw_A NAD+-dependent (R)-2-hy 63.6 11 0.00038 38.5 6.6 86 353-453 155-248 (331)
84 3qha_A Putative oxidoreductase 63.5 3.7 0.00013 40.8 3.0 143 353-513 24-212 (296)
85 3c85_A Putative glutathione-re 63.5 5.4 0.00018 36.3 3.8 92 353-451 48-150 (183)
86 2iz1_A 6-phosphogluconate dehy 63.5 9.8 0.00034 40.7 6.5 97 353-456 14-120 (474)
87 2hmt_A YUAA protein; RCK, KTN, 63.4 5.2 0.00018 34.0 3.6 30 353-385 15-44 (144)
88 4gwg_A 6-phosphogluconate dehy 62.9 5 0.00017 43.5 4.0 149 353-512 13-216 (484)
89 3pp8_A Glyoxylate/hydroxypyruv 62.5 9.3 0.00032 38.9 5.8 84 353-453 148-243 (315)
90 3oj0_A Glutr, glutamyl-tRNA re 62.4 6.8 0.00023 34.3 4.2 78 353-443 30-112 (144)
91 3l9w_A Glutathione-regulated p 61.7 25 0.00085 37.0 9.1 138 353-501 13-165 (413)
92 4hy3_A Phosphoglycerate oxidor 61.4 14 0.00048 38.5 7.0 88 353-453 185-280 (365)
93 4g2n_A D-isomer specific 2-hyd 61.1 17 0.00058 37.6 7.5 87 353-453 182-277 (345)
94 3hg7_A D-isomer specific 2-hyd 60.6 22 0.00074 36.4 8.1 88 353-454 149-245 (324)
95 3dtt_A NADP oxidoreductase; st 60.3 4.6 0.00016 39.0 2.9 81 353-443 28-126 (245)
96 4e6p_A Probable sorbitol dehyd 60.0 3 0.0001 40.3 1.5 35 353-390 18-52 (259)
97 1pgj_A 6PGDH, 6-PGDH, 6-phosph 59.9 8.6 0.00029 41.3 5.2 101 353-456 10-120 (478)
98 4dio_A NAD(P) transhydrogenase 59.7 19 0.00064 38.2 7.6 86 353-441 199-312 (405)
99 1qp8_A Formate dehydrogenase; 59.7 24 0.00084 35.5 8.3 76 353-445 133-214 (303)
100 3ic5_A Putative saccharopine d 59.7 3.4 0.00012 34.0 1.6 32 353-387 14-46 (118)
101 1vl6_A Malate oxidoreductase; 59.5 3.2 0.00011 43.9 1.6 88 353-444 201-297 (388)
102 1vpd_A Tartronate semialdehyde 59.2 14 0.00046 36.2 6.2 92 353-456 14-116 (299)
103 3l4b_C TRKA K+ channel protien 59.0 5.5 0.00019 37.4 3.1 94 353-452 9-111 (218)
104 2ahr_A Putative pyrroline carb 58.5 11 0.00036 36.3 5.2 90 353-454 12-103 (259)
105 4dyv_A Short-chain dehydrogena 57.9 3.5 0.00012 40.5 1.6 35 353-390 38-72 (272)
106 3cky_A 2-hydroxymethyl glutara 57.2 12 0.00042 36.6 5.4 90 353-454 13-113 (301)
107 3ggo_A Prephenate dehydrogenas 57.0 17 0.00059 36.6 6.6 82 353-444 42-131 (314)
108 3tri_A Pyrroline-5-carboxylate 56.1 13 0.00045 36.7 5.4 89 353-453 12-110 (280)
109 2ew2_A 2-dehydropantoate 2-red 55.5 11 0.00036 36.9 4.6 87 353-444 12-111 (316)
110 4eso_A Putative oxidoreductase 55.4 3.5 0.00012 39.9 1.1 35 353-390 18-52 (255)
111 3f9i_A 3-oxoacyl-[acyl-carrier 55.2 4 0.00014 38.8 1.5 34 353-389 24-57 (249)
112 3gvc_A Oxidoreductase, probabl 55.0 4.9 0.00017 39.5 2.1 35 353-390 39-73 (277)
113 2yq5_A D-isomer specific 2-hyd 54.8 18 0.00061 37.3 6.4 86 353-453 157-250 (343)
114 1zmt_A Haloalcohol dehalogenas 54.2 14 0.00049 35.3 5.2 21 353-373 11-31 (254)
115 1i36_A Conserved hypothetical 53.4 14 0.00047 35.5 5.0 91 353-455 9-104 (264)
116 2p4q_A 6-phosphogluconate dehy 53.4 11 0.00038 40.8 4.7 151 353-513 19-222 (497)
117 2egg_A AROE, shikimate 5-dehyd 53.3 31 0.0011 34.4 7.8 104 353-465 150-262 (297)
118 3grp_A 3-oxoacyl-(acyl carrier 53.2 4.6 0.00016 39.4 1.5 35 353-390 37-71 (266)
119 3asu_A Short-chain dehydrogena 52.9 5.2 0.00018 38.5 1.8 34 353-389 10-43 (248)
120 2hk9_A Shikimate dehydrogenase 52.6 79 0.0027 30.8 10.5 98 353-465 138-241 (275)
121 1dxy_A D-2-hydroxyisocaproate 52.3 21 0.00071 36.5 6.4 88 353-455 154-249 (333)
122 2pgd_A 6-phosphogluconate dehy 52.2 10 0.00035 40.6 4.2 149 353-513 11-215 (482)
123 2vns_A Metalloreductase steap3 52.0 9.5 0.00033 36.0 3.5 80 353-445 37-119 (215)
124 2cuk_A Glycerate dehydrogenase 51.7 17 0.00057 36.8 5.5 84 353-454 153-244 (311)
125 3n74_A 3-ketoacyl-(acyl-carrie 51.6 5 0.00017 38.4 1.5 35 353-390 19-53 (261)
126 4dqx_A Probable oxidoreductase 51.3 4.9 0.00017 39.4 1.4 35 353-390 37-71 (277)
127 3rd5_A Mypaa.01249.C; ssgcid, 51.3 4.6 0.00016 39.6 1.2 34 353-389 26-59 (291)
128 3p2y_A Alanine dehydrogenase/p 51.3 18 0.0006 38.1 5.7 86 353-441 193-302 (381)
129 1hdc_A 3-alpha, 20 beta-hydrox 51.1 4.6 0.00016 38.8 1.2 34 353-389 15-48 (254)
130 3ek2_A Enoyl-(acyl-carrier-pro 50.7 7.6 0.00026 37.1 2.6 40 353-392 26-65 (271)
131 1qsg_A Enoyl-[acyl-carrier-pro 50.7 10 0.00035 36.5 3.6 22 353-374 21-42 (265)
132 1j4a_A D-LDH, D-lactate dehydr 50.4 14 0.00049 37.7 4.8 87 353-454 155-250 (333)
133 3dii_A Short-chain dehydrogena 50.3 5 0.00017 38.4 1.3 35 353-390 12-46 (247)
134 3evt_A Phosphoglycerate dehydr 50.0 29 0.00099 35.4 7.0 88 353-454 146-242 (324)
135 1x13_A NAD(P) transhydrogenase 49.5 14 0.00049 38.7 4.7 80 353-443 181-294 (401)
136 3e8x_A Putative NAD-dependent 49.4 13 0.00043 34.9 3.9 61 353-421 31-94 (236)
137 4egf_A L-xylulose reductase; s 49.3 8.4 0.00029 37.3 2.7 32 353-387 30-61 (266)
138 3m1a_A Putative dehydrogenase; 49.2 3.4 0.00012 40.1 -0.1 34 353-389 15-48 (281)
139 4fgs_A Probable dehydrogenase 49.1 13 0.00043 37.1 4.0 36 353-391 39-74 (273)
140 4ibo_A Gluconate dehydrogenase 49.1 11 0.00037 36.8 3.5 33 353-388 36-68 (271)
141 2ehd_A Oxidoreductase, oxidore 48.9 7.1 0.00024 36.6 2.0 34 353-389 15-48 (234)
142 3afn_B Carbonyl reductase; alp 48.8 8.6 0.00029 36.3 2.7 22 353-374 17-38 (258)
143 3op4_A 3-oxoacyl-[acyl-carrier 48.8 4.9 0.00017 38.5 0.9 34 353-389 19-52 (248)
144 3ged_A Short-chain dehydrogena 48.8 11 0.00037 37.0 3.5 37 353-392 12-48 (247)
145 2wsb_A Galactitol dehydrogenas 48.1 5.3 0.00018 37.8 1.0 34 353-389 21-54 (254)
146 1hxh_A 3BETA/17BETA-hydroxyste 47.7 8.6 0.00029 36.8 2.5 34 353-389 16-49 (253)
147 3e5r_O PP38, glyceraldehyde-3- 47.5 34 0.0011 35.2 7.0 88 353-441 12-126 (337)
148 3zv4_A CIS-2,3-dihydrobiphenyl 47.4 5.9 0.0002 38.8 1.3 35 353-390 15-49 (281)
149 2hq1_A Glucose/ribitol dehydro 47.2 8.8 0.0003 36.1 2.4 24 353-376 15-38 (247)
150 1yb4_A Tartronic semialdehyde 47.0 11 0.00038 36.6 3.2 89 353-454 12-111 (295)
151 1x13_A NAD(P) transhydrogenase 46.9 64 0.0022 33.7 9.2 89 357-464 27-121 (401)
152 2f1k_A Prephenate dehydrogenas 46.5 26 0.0009 33.8 5.8 81 353-445 9-95 (279)
153 3tox_A Short chain dehydrogena 46.4 13 0.00043 36.6 3.5 34 353-389 18-51 (280)
154 3i83_A 2-dehydropantoate 2-red 46.3 1.6E+02 0.0056 29.0 11.9 22 353-374 11-32 (320)
155 2ph3_A 3-oxoacyl-[acyl carrier 46.2 8.1 0.00028 36.2 2.0 32 353-386 11-42 (245)
156 2eez_A Alanine dehydrogenase; 46.2 7.4 0.00025 40.1 1.8 75 353-433 175-257 (369)
157 4fs3_A Enoyl-[acyl-carrier-pro 46.1 9.3 0.00032 37.0 2.5 20 354-373 19-38 (256)
158 3ojo_A CAP5O; rossmann fold, c 45.9 32 0.0011 36.6 6.7 33 353-388 20-52 (431)
159 3ak4_A NADH-dependent quinucli 45.8 7.4 0.00025 37.4 1.7 34 353-389 22-55 (263)
160 3gvx_A Glycerate dehydrogenase 45.7 36 0.0012 34.2 6.8 85 353-454 131-224 (290)
161 1gpj_A Glutamyl-tRNA reductase 45.2 30 0.001 36.1 6.3 81 353-443 176-268 (404)
162 2ew8_A (S)-1-phenylethanol deh 45.2 5.9 0.0002 37.9 0.9 21 353-373 17-37 (249)
163 3o8q_A Shikimate 5-dehydrogena 45.1 55 0.0019 32.6 8.0 103 353-465 135-244 (281)
164 3phh_A Shikimate dehydrogenase 45.0 96 0.0033 30.8 9.7 97 353-465 127-230 (269)
165 4imr_A 3-oxoacyl-(acyl-carrier 44.9 14 0.00049 36.0 3.7 22 353-374 43-64 (275)
166 1nff_A Putative oxidoreductase 44.8 6.8 0.00023 37.8 1.3 33 353-388 17-49 (260)
167 1fmc_A 7 alpha-hydroxysteroid 44.8 5.3 0.00018 37.7 0.5 31 353-386 21-51 (255)
168 2g1u_A Hypothetical protein TM 44.4 5.2 0.00018 35.5 0.3 22 353-374 28-49 (155)
169 2pnf_A 3-oxoacyl-[acyl-carrier 44.4 7.3 0.00025 36.6 1.4 31 353-386 17-47 (248)
170 1p77_A Shikimate 5-dehydrogena 44.4 54 0.0019 32.0 7.8 85 353-445 128-218 (272)
171 2g5c_A Prephenate dehydrogenas 44.3 26 0.0009 33.9 5.4 83 353-445 10-100 (281)
172 2cfc_A 2-(R)-hydroxypropyl-COM 44.1 6.7 0.00023 37.0 1.0 33 353-388 12-44 (250)
173 3d3w_A L-xylulose reductase; u 44.1 9.3 0.00032 35.9 2.0 34 353-389 17-50 (244)
174 1y1p_A ARII, aldehyde reductas 44.0 22 0.00074 34.7 4.8 22 353-374 21-42 (342)
175 1uls_A Putative 3-oxoacyl-acyl 43.9 7.8 0.00027 37.0 1.5 34 353-389 15-48 (245)
176 2o23_A HADH2 protein; HSD17B10 43.7 4.2 0.00014 38.8 -0.4 22 353-374 22-43 (265)
177 3un1_A Probable oxidoreductase 43.1 27 0.00093 33.6 5.3 22 353-374 38-59 (260)
178 3tpc_A Short chain alcohol deh 43.0 3.2 0.00011 39.9 -1.5 22 353-374 17-38 (257)
179 3ai3_A NADPH-sorbose reductase 42.8 8.2 0.00028 37.1 1.4 31 353-386 17-47 (263)
180 1cyd_A Carbonyl reductase; sho 42.7 9.9 0.00034 35.6 2.0 34 353-389 17-50 (244)
181 2vhw_A Alanine dehydrogenase; 42.6 10 0.00035 39.3 2.2 83 353-441 177-268 (377)
182 1yde_A Retinal dehydrogenase/r 42.4 8.8 0.0003 37.3 1.6 34 353-389 19-52 (270)
183 2uyy_A N-PAC protein; long-cha 42.1 18 0.00061 35.8 3.9 80 353-444 39-127 (316)
184 3enk_A UDP-glucose 4-epimerase 42.1 13 0.00046 36.5 2.9 23 353-375 15-37 (341)
185 3db2_A Putative NADPH-dependen 42.1 17 0.00057 36.8 3.7 78 353-439 14-96 (354)
186 1mxh_A Pteridine reductase 2; 41.9 11 0.00039 36.2 2.3 32 353-387 21-53 (276)
187 3lyl_A 3-oxoacyl-(acyl-carrier 41.8 6.6 0.00022 37.2 0.6 31 353-386 15-45 (247)
188 3dfz_A SIRC, precorrin-2 dehyd 41.7 28 0.00095 33.8 5.0 35 353-389 40-74 (223)
189 2pd4_A Enoyl-[acyl-carrier-pro 41.6 16 0.00055 35.3 3.4 22 353-374 18-39 (275)
190 3h9e_O Glyceraldehyde-3-phosph 41.3 68 0.0023 33.3 8.2 86 353-440 16-126 (346)
191 3ezy_A Dehydrogenase; structur 41.2 20 0.0007 36.0 4.2 78 353-439 11-94 (344)
192 3awd_A GOX2181, putative polyo 41.2 7 0.00024 37.1 0.7 30 353-385 23-52 (260)
193 3ktd_A Prephenate dehydrogenas 41.1 15 0.0005 37.9 3.1 79 353-443 17-103 (341)
194 3oig_A Enoyl-[acyl-carrier-pro 40.7 18 0.00061 34.6 3.5 35 355-389 21-55 (266)
195 1zk4_A R-specific alcohol dehy 40.7 33 0.0011 32.1 5.4 33 353-388 16-48 (251)
196 1jay_A Coenzyme F420H2:NADP+ o 40.5 6.6 0.00023 36.4 0.4 85 353-442 10-98 (212)
197 3v8b_A Putative dehydrogenase, 40.4 33 0.0011 33.5 5.5 34 353-389 38-71 (283)
198 2p91_A Enoyl-[acyl-carrier-pro 40.2 14 0.00046 36.1 2.6 22 353-374 33-54 (285)
199 3ba1_A HPPR, hydroxyphenylpyru 40.1 39 0.0013 34.5 6.2 86 353-455 173-267 (333)
200 3tzq_B Short-chain type dehydr 40.1 5.3 0.00018 38.9 -0.4 22 353-374 21-42 (271)
201 3kb6_A D-lactate dehydrogenase 40.0 22 0.00075 36.4 4.2 87 353-453 150-244 (334)
202 2gf2_A Hibadh, 3-hydroxyisobut 39.9 16 0.00056 35.5 3.2 80 353-444 9-97 (296)
203 2gk4_A Conserved hypothetical 39.2 18 0.00061 35.5 3.2 26 349-374 21-50 (232)
204 3ctm_A Carbonyl reductase; alc 39.0 14 0.0005 35.5 2.6 33 353-385 44-76 (279)
205 2wyu_A Enoyl-[acyl carrier pro 39.0 12 0.00041 36.0 2.0 22 353-374 20-41 (261)
206 2h7i_A Enoyl-[acyl-carrier-pro 38.7 10 0.00034 36.7 1.4 21 353-373 19-39 (269)
207 3q2i_A Dehydrogenase; rossmann 38.5 21 0.00071 36.1 3.8 77 353-439 22-105 (354)
208 1xea_A Oxidoreductase, GFO/IDH 38.2 45 0.0015 33.1 6.2 78 353-439 11-93 (323)
209 1sny_A Sniffer CG10964-PA; alp 38.2 18 0.00062 34.3 3.1 22 353-374 31-55 (267)
210 3euw_A MYO-inositol dehydrogen 38.2 21 0.00071 35.9 3.7 77 353-439 13-95 (344)
211 4dgs_A Dehydrogenase; structur 38.1 30 0.001 35.5 5.0 84 353-453 180-272 (340)
212 3pwz_A Shikimate dehydrogenase 38.1 60 0.002 32.1 7.0 83 353-445 129-219 (272)
213 3uf0_A Short-chain dehydrogena 37.9 12 0.0004 36.6 1.7 22 353-374 41-62 (273)
214 1e7w_A Pteridine reductase; di 37.5 20 0.00067 35.2 3.3 33 353-387 19-51 (291)
215 2czc_A Glyceraldehyde-3-phosph 37.4 10 0.00035 38.7 1.3 85 353-441 11-111 (334)
216 1yb1_A 17-beta-hydroxysteroid 37.3 8.6 0.0003 37.2 0.6 31 353-386 41-71 (272)
217 3ppi_A 3-hydroxyacyl-COA dehyd 37.3 21 0.00072 34.5 3.4 35 353-390 40-74 (281)
218 3gdg_A Probable NADP-dependent 37.2 18 0.00062 34.5 2.9 23 354-376 33-55 (267)
219 1bg6_A N-(1-D-carboxylethyl)-L 37.1 46 0.0016 33.1 6.0 75 353-432 13-95 (359)
220 3r1i_A Short-chain type dehydr 37.1 11 0.00038 36.8 1.4 22 353-374 42-63 (276)
221 1x1t_A D(-)-3-hydroxybutyrate 37.1 12 0.00042 35.8 1.7 21 353-373 14-34 (260)
222 1vl8_A Gluconate 5-dehydrogena 36.8 12 0.0004 36.4 1.5 31 353-386 31-61 (267)
223 3p19_A BFPVVD8, putative blue 36.8 5.8 0.0002 38.7 -0.7 30 353-385 26-55 (266)
224 2bgk_A Rhizome secoisolaricire 36.5 12 0.0004 35.9 1.5 33 353-388 26-58 (278)
225 2a9f_A Putative malic enzyme ( 36.5 6.7 0.00023 41.6 -0.3 90 353-444 197-292 (398)
226 4g81_D Putative hexonate dehyd 36.5 38 0.0013 33.2 5.2 33 353-388 19-51 (255)
227 2izz_A Pyrroline-5-carboxylate 36.5 35 0.0012 34.1 5.1 90 353-453 31-130 (322)
228 3grk_A Enoyl-(acyl-carrier-pro 36.4 11 0.00038 37.1 1.3 20 355-374 45-64 (293)
229 3guy_A Short-chain dehydrogena 36.2 24 0.00084 32.9 3.6 34 353-389 11-44 (230)
230 3ftp_A 3-oxoacyl-[acyl-carrier 36.2 8.8 0.0003 37.4 0.5 31 353-386 38-68 (270)
231 3ezl_A Acetoacetyl-COA reducta 36.1 16 0.00056 34.6 2.4 22 353-374 23-44 (256)
232 1ja9_A 4HNR, 1,3,6,8-tetrahydr 36.0 9.2 0.00032 36.5 0.6 31 353-385 31-61 (274)
233 1gee_A Glucose 1-dehydrogenase 35.9 9.3 0.00032 36.3 0.6 31 353-385 17-47 (261)
234 2rhc_B Actinorhodin polyketide 35.9 12 0.00041 36.4 1.4 31 353-386 32-62 (277)
235 1ff9_A Saccharopine reductase; 35.4 15 0.00053 39.0 2.3 88 353-446 12-105 (450)
236 1l7d_A Nicotinamide nucleotide 35.3 34 0.0012 35.3 4.9 23 353-376 181-203 (384)
237 2a4k_A 3-oxoacyl-[acyl carrier 35.2 13 0.00046 35.9 1.7 34 353-389 16-49 (263)
238 1tlt_A Putative oxidoreductase 34.9 31 0.001 34.2 4.3 76 353-439 14-95 (319)
239 4hkt_A Inositol 2-dehydrogenas 34.8 25 0.00087 35.0 3.7 77 353-439 12-93 (331)
240 3qsg_A NAD-binding phosphogluc 34.8 23 0.00077 35.4 3.3 79 353-444 33-120 (312)
241 3cps_A Glyceraldehyde 3-phosph 34.7 1.1E+02 0.0037 31.7 8.5 87 353-440 26-137 (354)
242 3rc1_A Sugar 3-ketoreductase; 34.7 23 0.00077 36.0 3.3 77 353-439 36-119 (350)
243 3k96_A Glycerol-3-phosphate de 34.5 30 0.001 35.6 4.2 85 353-442 38-134 (356)
244 4iin_A 3-ketoacyl-acyl carrier 34.5 10 0.00035 36.6 0.7 23 353-375 39-61 (271)
245 3qlj_A Short chain dehydrogena 34.3 20 0.00067 35.8 2.7 21 353-373 37-57 (322)
246 1ydw_A AX110P-like protein; st 34.2 54 0.0019 33.0 6.1 81 353-439 15-101 (362)
247 2ho3_A Oxidoreductase, GFO/IDH 33.8 25 0.00084 35.0 3.4 78 353-439 10-92 (325)
248 3k31_A Enoyl-(acyl-carrier-pro 33.7 17 0.00059 35.8 2.2 39 354-392 43-81 (296)
249 1evy_A Glycerol-3-phosphate de 33.5 18 0.00062 36.7 2.3 34 353-389 24-57 (366)
250 1u7z_A Coenzyme A biosynthesis 33.2 25 0.00087 34.2 3.2 26 349-374 26-55 (226)
251 1e6u_A GDP-fucose synthetase; 33.1 46 0.0016 32.2 5.2 23 353-375 13-35 (321)
252 1j5p_A Aspartate dehydrogenase 32.8 41 0.0014 33.4 4.7 62 353-434 21-83 (253)
253 4da9_A Short-chain dehydrogena 32.4 17 0.00057 35.6 1.8 32 353-386 39-70 (280)
254 3h7a_A Short chain dehydrogena 32.3 15 0.0005 35.3 1.3 22 353-374 17-38 (252)
255 3uuw_A Putative oxidoreductase 32.2 26 0.0009 34.5 3.2 77 353-439 15-96 (308)
256 2qhx_A Pteridine reductase 1; 32.1 27 0.00091 35.1 3.3 33 353-387 56-88 (328)
257 3b1j_A Glyceraldehyde 3-phosph 32.0 86 0.0029 32.2 7.2 32 353-385 11-45 (339)
258 4gkb_A 3-oxoacyl-[acyl-carrier 32.0 51 0.0017 32.3 5.3 40 353-392 17-56 (258)
259 4ezb_A Uncharacterized conserv 31.9 36 0.0012 34.1 4.3 142 353-510 33-223 (317)
260 3i4f_A 3-oxoacyl-[acyl-carrier 31.8 8.8 0.0003 36.7 -0.3 24 353-376 17-40 (264)
261 2x5j_O E4PDH, D-erythrose-4-ph 31.8 1.3E+02 0.0045 30.8 8.5 86 353-440 11-124 (339)
262 3edm_A Short chain dehydrogena 31.7 16 0.00054 35.2 1.5 24 353-376 18-41 (259)
263 3pgx_A Carveol dehydrogenase; 31.7 12 0.00041 36.3 0.6 22 353-374 25-46 (280)
264 3v2g_A 3-oxoacyl-[acyl-carrier 31.6 14 0.00046 36.1 1.0 22 353-374 41-62 (271)
265 3btv_A Galactose/lactose metab 31.4 26 0.00087 36.9 3.1 80 353-439 33-125 (438)
266 2q2v_A Beta-D-hydroxybutyrate 31.4 27 0.00094 33.2 3.1 22 353-374 14-35 (255)
267 2glx_A 1,5-anhydro-D-fructose 31.2 38 0.0013 33.5 4.3 78 353-439 9-92 (332)
268 3jyo_A Quinate/shikimate dehyd 31.1 2.6E+02 0.0089 27.5 10.4 103 353-465 136-251 (283)
269 4hp8_A 2-deoxy-D-gluconate 3-d 31.1 63 0.0022 31.6 5.7 21 353-373 19-39 (247)
270 1np3_A Ketol-acid reductoisome 30.9 21 0.00071 36.3 2.3 59 353-422 25-83 (338)
271 1sby_A Alcohol dehydrogenase; 30.9 68 0.0023 30.2 5.8 36 353-389 15-51 (254)
272 1wma_A Carbonyl reductase [NAD 30.8 13 0.00045 35.1 0.7 30 353-385 14-44 (276)
273 3u5t_A 3-oxoacyl-[acyl-carrier 30.7 15 0.00051 35.7 1.1 23 353-375 37-59 (267)
274 1vl0_A DTDP-4-dehydrorhamnose 30.6 24 0.00082 33.9 2.6 23 353-375 22-44 (292)
275 3pxx_A Carveol dehydrogenase; 30.6 13 0.00046 35.8 0.8 22 353-374 20-41 (287)
276 2i76_A Hypothetical protein; N 30.3 25 0.00086 34.3 2.7 78 353-442 11-90 (276)
277 3do5_A HOM, homoserine dehydro 30.2 31 0.0011 35.2 3.5 64 353-421 11-90 (327)
278 3ew7_A LMO0794 protein; Q8Y8U8 30.0 27 0.00091 31.8 2.7 56 353-421 10-71 (221)
279 3qiv_A Short-chain dehydrogena 29.8 38 0.0013 31.9 3.8 33 353-388 19-51 (253)
280 2dpo_A L-gulonate 3-dehydrogen 29.8 37 0.0013 34.4 3.9 32 353-387 15-46 (319)
281 1zej_A HBD-9, 3-hydroxyacyl-CO 29.7 84 0.0029 31.5 6.5 62 353-422 21-84 (293)
282 3gk3_A Acetoacetyl-COA reducta 29.4 13 0.00044 35.9 0.4 22 353-374 35-56 (269)
283 1xyg_A Putative N-acetyl-gamma 29.4 81 0.0028 32.4 6.5 81 353-442 26-114 (359)
284 3r3s_A Oxidoreductase; structu 29.3 20 0.00067 35.3 1.7 21 353-373 59-79 (294)
285 1u8f_O GAPDH, glyceraldehyde-3 29.1 1.8E+02 0.0062 29.5 9.0 87 353-441 12-124 (335)
286 4fn4_A Short chain dehydrogena 29.0 43 0.0015 32.8 4.2 33 353-388 17-49 (254)
287 1txg_A Glycerol-3-phosphate de 28.9 53 0.0018 32.3 4.9 86 353-444 9-107 (335)
288 3k5p_A D-3-phosphoglycerate de 28.8 80 0.0027 33.4 6.4 86 353-454 165-259 (416)
289 3sc4_A Short chain dehydrogena 28.7 24 0.00083 34.4 2.3 22 353-374 19-40 (285)
290 3i1j_A Oxidoreductase, short c 28.6 41 0.0014 31.5 3.8 33 353-388 24-56 (247)
291 3f1l_A Uncharacterized oxidore 28.6 40 0.0014 32.0 3.8 32 353-387 22-53 (252)
292 2nvw_A Galactose/lactose metab 28.6 24 0.00083 37.7 2.4 70 353-429 52-125 (479)
293 1edo_A Beta-keto acyl carrier 28.5 15 0.00051 34.4 0.7 31 353-385 11-41 (244)
294 3h2s_A Putative NADH-flavin re 28.4 29 0.001 31.7 2.7 58 353-421 10-72 (224)
295 2iz6_A Molybdenum cofactor car 28.3 2.9E+02 0.01 25.5 9.6 125 355-489 33-172 (176)
296 1b7g_O Protein (glyceraldehyde 28.2 30 0.001 35.4 2.9 86 353-443 10-111 (340)
297 1pjc_A Protein (L-alanine dehy 28.2 32 0.0011 35.3 3.1 82 353-442 176-268 (361)
298 3e03_A Short chain dehydrogena 28.2 27 0.00094 33.7 2.5 22 353-374 16-37 (274)
299 1obf_O Glyceraldehyde 3-phosph 28.1 1.1E+02 0.0037 31.5 7.1 77 353-432 10-111 (335)
300 3sx2_A Putative 3-ketoacyl-(ac 27.9 15 0.00051 35.5 0.5 22 353-374 23-44 (278)
301 3ucx_A Short chain dehydrogena 27.8 51 0.0017 31.5 4.4 33 353-388 21-53 (264)
302 3s55_A Putative short-chain de 27.8 16 0.00055 35.4 0.7 22 353-374 20-41 (281)
303 4b4o_A Epimerase family protei 27.8 29 0.001 33.5 2.7 22 353-374 10-31 (298)
304 3mog_A Probable 3-hydroxybutyr 27.6 55 0.0019 35.2 5.0 33 353-388 14-46 (483)
305 3l6e_A Oxidoreductase, short-c 27.3 44 0.0015 31.5 3.8 34 353-389 13-46 (235)
306 1p9o_A Phosphopantothenoylcyst 27.2 35 0.0012 34.8 3.2 27 349-375 57-87 (313)
307 2yjz_A Metalloreductase steap4 32.9 13 0.00046 34.9 0.0 78 353-444 28-108 (201)
308 3gg2_A Sugar dehydrogenase, UD 26.7 61 0.0021 34.4 5.1 33 353-388 11-43 (450)
309 4e3z_A Putative oxidoreductase 26.7 18 0.00062 34.8 0.9 31 353-385 36-66 (272)
310 3sc6_A DTDP-4-dehydrorhamnose 26.7 22 0.00077 34.0 1.6 23 353-375 15-37 (287)
311 1hyh_A L-hicdh, L-2-hydroxyiso 26.6 66 0.0023 31.9 5.1 67 353-423 10-81 (309)
312 3ksu_A 3-oxoacyl-acyl carrier 26.6 38 0.0013 32.5 3.2 36 353-388 21-56 (262)
313 3imf_A Short chain dehydrogena 26.5 46 0.0016 31.7 3.8 34 353-389 16-49 (257)
314 3e9m_A Oxidoreductase, GFO/IDH 26.5 46 0.0016 33.2 3.9 80 353-440 14-98 (330)
315 3rkr_A Short chain oxidoreduct 26.4 46 0.0016 31.7 3.8 33 353-388 39-71 (262)
316 3nrc_A Enoyl-[acyl-carrier-pro 26.4 84 0.0029 30.2 5.7 37 355-392 40-76 (280)
317 3v2h_A D-beta-hydroxybutyrate 26.1 27 0.00092 34.1 2.0 33 353-387 35-67 (281)
318 4dmm_A 3-oxoacyl-[acyl-carrier 26.1 18 0.0006 35.1 0.7 22 353-374 38-59 (269)
319 3o26_A Salutaridine reductase; 26.0 47 0.0016 31.9 3.8 33 353-388 22-54 (311)
320 3l77_A Short-chain alcohol deh 26.0 49 0.0017 30.7 3.8 32 353-387 12-43 (235)
321 1sc6_A PGDH, D-3-phosphoglycer 25.9 83 0.0028 33.0 5.9 87 353-455 154-249 (404)
322 3a28_C L-2.3-butanediol dehydr 25.9 17 0.00057 34.8 0.5 22 353-374 12-33 (258)
323 3g79_A NDP-N-acetyl-D-galactos 25.8 68 0.0023 34.5 5.3 67 353-422 27-112 (478)
324 3svt_A Short-chain type dehydr 25.6 48 0.0017 31.9 3.8 33 353-388 21-53 (281)
325 1id1_A Putative potassium chan 25.6 36 0.0012 29.7 2.6 92 353-451 12-116 (153)
326 2c07_A 3-oxoacyl-(acyl-carrier 25.5 13 0.00046 36.1 -0.3 31 353-386 54-84 (285)
327 2x9g_A PTR1, pteridine reducta 25.4 20 0.00069 34.9 1.0 22 353-374 33-54 (288)
328 3is3_A 17BETA-hydroxysteroid d 25.4 17 0.0006 35.0 0.5 22 353-374 28-49 (270)
329 3eag_A UDP-N-acetylmuramate:L- 25.4 82 0.0028 31.5 5.6 25 353-378 13-38 (326)
330 1mv8_A GMD, GDP-mannose 6-dehy 25.3 62 0.0021 33.9 4.8 33 353-388 9-41 (436)
331 1nvt_A Shikimate 5'-dehydrogen 25.3 2E+02 0.0068 28.0 8.3 105 353-465 137-252 (287)
332 1hdo_A Biliverdin IX beta redu 25.2 37 0.0013 30.3 2.7 22 353-374 13-34 (206)
333 3tfo_A Putative 3-oxoacyl-(acy 25.1 50 0.0017 32.0 3.7 33 353-388 14-46 (264)
334 3dhn_A NAD-dependent epimerase 25.0 33 0.0011 31.5 2.4 22 353-374 14-35 (227)
335 2qrj_A Saccharopine dehydrogen 24.9 62 0.0021 34.1 4.6 67 353-441 224-300 (394)
336 3ioy_A Short-chain dehydrogena 24.8 60 0.002 32.3 4.4 32 353-387 18-49 (319)
337 4dry_A 3-oxoacyl-[acyl-carrier 24.8 51 0.0017 32.1 3.8 33 353-388 43-75 (281)
338 3uce_A Dehydrogenase; rossmann 24.8 42 0.0015 31.1 3.1 22 353-374 16-37 (223)
339 3pk0_A Short-chain dehydrogena 24.7 52 0.0018 31.5 3.8 33 353-388 20-52 (262)
340 3cea_A MYO-inositol 2-dehydrog 24.6 51 0.0018 32.8 3.8 78 353-439 17-101 (346)
341 3sju_A Keto reductase; short-c 24.5 52 0.0018 31.8 3.8 33 353-388 34-66 (279)
342 3t4x_A Oxidoreductase, short c 24.4 52 0.0018 31.5 3.7 32 353-387 20-51 (267)
343 3two_A Mannitol dehydrogenase; 24.4 1E+02 0.0035 30.7 6.0 77 353-440 186-265 (348)
344 3lf2_A Short chain oxidoreduct 24.3 53 0.0018 31.4 3.8 33 353-388 18-50 (265)
345 1p9l_A Dihydrodipicolinate red 24.2 1.5E+02 0.0051 28.9 7.0 27 353-379 10-37 (245)
346 2jah_A Clavulanic acid dehydro 24.1 55 0.0019 31.0 3.8 33 353-388 17-49 (247)
347 3mz0_A Inositol 2-dehydrogenas 24.1 45 0.0015 33.4 3.3 79 353-439 11-96 (344)
348 2aef_A Calcium-gated potassium 24.0 21 0.00072 33.6 0.8 103 353-468 18-129 (234)
349 2z1n_A Dehydrogenase; reductas 23.7 56 0.0019 31.0 3.8 32 353-387 17-48 (260)
350 1iy8_A Levodione reductase; ox 23.7 56 0.0019 31.2 3.8 32 353-387 23-54 (267)
351 3fbt_A Chorismate mutase and s 23.7 2.3E+02 0.008 28.1 8.4 96 353-465 131-236 (282)
352 2zat_A Dehydrogenase/reductase 23.5 57 0.0019 30.9 3.8 31 353-386 24-54 (260)
353 3o38_A Short chain dehydrogena 23.5 69 0.0024 30.4 4.4 32 354-388 34-65 (266)
354 2nwq_A Probable short-chain de 23.5 60 0.0021 31.4 4.0 34 353-389 31-64 (272)
355 3dqp_A Oxidoreductase YLBE; al 23.3 32 0.0011 31.5 1.9 23 353-375 10-32 (219)
356 2b4q_A Rhamnolipids biosynthes 23.2 67 0.0023 31.0 4.3 33 353-388 39-71 (276)
357 4b79_A PA4098, probable short- 23.1 1.1E+02 0.0036 29.9 5.7 21 353-373 21-41 (242)
358 2qq5_A DHRS1, dehydrogenase/re 23.0 59 0.002 30.9 3.8 32 353-387 15-46 (260)
359 2ae2_A Protein (tropinone redu 22.9 59 0.002 30.8 3.8 31 353-386 19-49 (260)
360 3u3x_A Oxidoreductase; structu 22.7 71 0.0024 32.4 4.5 79 353-439 35-118 (361)
361 3nyw_A Putative oxidoreductase 22.7 50 0.0017 31.4 3.2 33 353-388 17-49 (250)
362 1a5z_A L-lactate dehydrogenase 22.5 1.5E+02 0.0053 29.5 6.9 66 353-423 9-79 (319)
363 1spx_A Short-chain reductase f 22.3 62 0.0021 30.9 3.8 33 353-388 16-48 (278)
364 3vps_A TUNA, NAD-dependent epi 22.2 44 0.0015 32.1 2.7 23 353-375 17-39 (321)
365 1geg_A Acetoin reductase; SDR 22.2 63 0.0021 30.6 3.8 32 353-387 12-43 (256)
366 3tjr_A Short chain dehydrogena 22.2 61 0.0021 31.8 3.8 33 353-388 41-73 (301)
367 1rm4_O Glyceraldehyde 3-phosph 22.1 2E+02 0.0067 29.5 7.7 87 353-442 10-124 (337)
368 1zem_A Xylitol dehydrogenase; 22.1 63 0.0022 30.8 3.8 32 353-387 17-48 (262)
369 3hwr_A 2-dehydropantoate 2-red 22.0 1E+02 0.0035 30.6 5.5 94 353-453 28-133 (318)
370 2dkn_A 3-alpha-hydroxysteroid 21.9 45 0.0016 30.9 2.7 22 353-374 11-32 (255)
371 2y0c_A BCEC, UDP-glucose dehyd 21.9 61 0.0021 34.7 4.0 34 353-389 17-50 (478)
372 3kvo_A Hydroxysteroid dehydrog 21.8 41 0.0014 34.2 2.5 22 353-374 55-76 (346)
373 2p2s_A Putative oxidoreductase 21.7 48 0.0016 33.0 3.0 79 353-439 13-96 (336)
374 1ae1_A Tropinone reductase-I; 21.6 65 0.0022 30.9 3.8 32 353-387 31-62 (273)
375 1xkq_A Short-chain reductase f 21.6 65 0.0022 31.0 3.8 32 353-387 16-47 (280)
376 1gz6_A Estradiol 17 beta-dehyd 21.6 41 0.0014 33.7 2.4 21 353-373 19-39 (319)
377 3ko8_A NAD-dependent epimerase 21.6 50 0.0017 31.8 3.0 22 353-374 10-31 (312)
378 1qyc_A Phenylcoumaran benzylic 21.5 53 0.0018 31.6 3.1 23 353-375 14-36 (308)
379 2p4h_X Vestitone reductase; NA 21.5 50 0.0017 31.9 3.0 22 353-374 11-32 (322)
380 3gaf_A 7-alpha-hydroxysteroid 21.4 54 0.0019 31.2 3.2 32 353-387 22-53 (256)
381 1cf2_P Protein (glyceraldehyde 21.2 29 0.00099 35.5 1.2 86 353-442 10-111 (337)
382 4fc7_A Peroxisomal 2,4-dienoyl 21.0 63 0.0022 31.2 3.6 31 353-386 37-67 (277)
383 1gad_O D-glyceraldehyde-3-phos 20.9 2E+02 0.0069 29.2 7.5 83 353-438 10-117 (330)
384 1xg5_A ARPG836; short chain de 20.9 69 0.0023 30.7 3.8 31 353-386 42-72 (279)
385 1xq1_A Putative tropinone redu 20.8 70 0.0024 30.2 3.8 31 353-386 24-54 (266)
386 2pd6_A Estradiol 17-beta-dehyd 20.8 67 0.0023 30.2 3.6 33 353-388 17-49 (264)
387 3c1o_A Eugenol synthase; pheny 20.5 51 0.0018 32.0 2.8 22 353-374 14-35 (321)
388 2z1m_A GDP-D-mannose dehydrata 20.5 54 0.0018 31.9 3.0 23 353-375 13-35 (345)
389 3u9l_A 3-oxoacyl-[acyl-carrier 20.5 97 0.0033 30.9 4.9 35 353-387 15-51 (324)
390 1qyd_A Pinoresinol-lariciresin 20.4 57 0.002 31.4 3.1 23 353-375 14-36 (313)
391 2pk3_A GDP-6-deoxy-D-LYXO-4-he 20.4 50 0.0017 32.0 2.7 22 353-374 22-43 (321)
392 4had_A Probable oxidoreductase 20.3 49 0.0017 33.0 2.7 69 353-429 32-103 (350)
393 4e12_A Diketoreductase; oxidor 20.3 82 0.0028 30.7 4.3 33 353-388 13-45 (283)
394 4id9_A Short-chain dehydrogena 20.3 46 0.0016 32.7 2.5 22 353-374 29-50 (347)
395 2gdz_A NAD+-dependent 15-hydro 20.2 73 0.0025 30.3 3.8 31 353-386 17-47 (267)
396 2bd0_A Sepiapterin reductase; 20.2 21 0.00071 33.4 -0.2 32 353-387 12-50 (244)
397 3ius_A Uncharacterized conserv 20.1 42 0.0014 32.0 2.0 24 353-376 14-37 (286)
No 1
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=100.00 E-value=1.4e-89 Score=741.37 Aligned_cols=359 Identities=51% Similarity=0.786 Sum_probs=330.7
Q ss_pred CCCCCCCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhhhhhhhcCCCCcEEEEEEeEEcCCCcEEEEeeEEEE
Q psy8846 168 PTAENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQ 247 (568)
Q Consensus 168 ~T~~~~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I~~~I~~~~rv~~v~~pv~~d~G~~~~~~gyrv~ 247 (568)
.+..+|+||++|.++|++|+.+++++|+|+|+.++++++|++.++++++.|++|+|+++|++||.||+|++++|+|||||
T Consensus 2 ~~~~~~~f~~~v~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~p~r~i~~~vp~~~D~G~~~v~~GyRvq 81 (501)
T 3mw9_A 2 DREDDPNFFKMVEGFFDRGASIVEDKLVEDLKTRETEEQKRNRVRSILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQ 81 (501)
T ss_dssp CSTTCCCHHHHHHHHHHHHHHHHHHHHHHHCCCTTCSSHHHHHHHHHHHHHSSCSEEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCChhhhhhhhHHHHHHHhCCCeEEEEEEEEEeCCCCEEEeeeEEEE
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCeeeeCCCCHHHHHHHHHHhhHhhhhcCCCCCCceeEeeCCCCCCCHHHHHHHHHHHHHHHhhcCccccc
Q psy8846 248 HSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEF 327 (568)
Q Consensus 248 h~~~~GP~kGGiR~~p~v~~dev~aLA~~MT~K~Al~~lP~GGaKggI~~dP~~~s~~Eler~~r~f~~~L~~~~~iGp~ 327 (568)
||+++||+||||||||++|++|+++||+||||||||+|||||||||||.+||+.+|+.|++|+||+|+++|.++.+|||+
T Consensus 82 hn~a~GP~kGGiR~hp~v~l~ev~~La~~MT~KnAl~~LP~GGgKGgi~~DPk~~s~~El~r~~r~f~~eL~~~~~IGp~ 161 (501)
T 3mw9_A 82 HSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPG 161 (501)
T ss_dssp CCCSSSSEECCEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEECSCGGGSCHHHHHHHHHHHHHHHHHTTSCBTT
T ss_pred ECCCcCCCCCCeeecCCCCHHHHHHHHHHHHHHHHhcCCCCCCcceEEecCCccCCHHHHHHHHHHHHHHHhhccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987899999
Q ss_pred cCCCCCc----ccccch---hhhccc------------Cc---------e------------------------------
Q psy8846 328 KAVPGAR----AREGNV---TFNLLF------------HY---------K------------------------------ 349 (568)
Q Consensus 328 ~dipapD----~~~maw---~y~~~~------------G~---------R------------------------------ 349 (568)
.|||||| +++|+| +|+++. |. |
T Consensus 162 ~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eATg~GV~~~~~~~l~~~~~~~~~G~~~~ 241 (501)
T 3mw9_A 162 VDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPG 241 (501)
T ss_dssp TEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHTCHHHHHHTTCCSS
T ss_pred eeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCchHHHHHHHHHHHHhhhHHHHHcCCCCC
Confidence 9999999 899999 775421 11 1
Q ss_pred ------eec--cCHHHHHHHHHHHCCCeEeEeCCC--------CCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccce
Q psy8846 350 ------FSS--GPVSMYLPQIWVQEKGKCPGLPTH--------TRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCD 413 (568)
Q Consensus 350 ------~~~--GnVG~~~A~~L~~~GakvvaVsD~--------GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cD 413 (568)
.+| ||||+++|++|++.|||||+|||+ |||+++|.++++++|++.+||+++.+++ ++|+++||
T Consensus 242 l~g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i~~~~~a~~~~~-~il~~~~D 320 (501)
T 3mw9_A 242 FGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYEG-SILEVDCD 320 (501)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSSTTCTTSEEECS-CGGGSCCS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCeecccCceeecc-ccccccce
Confidence 011 999999999999999999999997 9999999999999999999999999864 89999999
Q ss_pred EEeeccccCCCChhhHhcccceEEEecCCcchHHHHHHHhccCCCcccccCc-------------HHHHhhccC------
Q psy8846 414 IFVPAAVEKVITKNNAHKIQAKIIAEAANESVQESLERRFGNVGGRIPVTPS-------------ESFQKRISG------ 474 (568)
Q Consensus 414 IliPaAl~~~It~~na~~i~AkiIvE~AN~~~~~~l~~~l~~~GggI~vvPd-------------e~~q~~~~~------ 474 (568)
||+|||++|+||++||++|+||+||||||+|+++.+.+.|.++ ||+|+|| ||+||.++.
T Consensus 321 IliPcA~~n~I~~~na~~l~akiV~EgAN~p~T~eA~~iL~~r--GIl~~PD~~aNAGGV~vSy~E~~qn~~~~~~grl~ 398 (501)
T 3mw9_A 321 ILIPAASEKQLTKSNAPRVKAKIIAEGANGPTTPEADKIFLER--NIMVIPDLYLNAGGVTVSYFEWLNNLNHVSYGRLT 398 (501)
T ss_dssp EEEECSSSCCBCTTTGGGCCCSEEECCSSSCBCHHHHHHHHHT--TCEEECHHHHTTHHHHHHHHHHHHHHHCSCTTTTT
T ss_pred EEeeccccCccCHhHHHHcCceEEEeCCCCcCCHHHHHHHHHC--CCEEEChHHhcCchHHhhHHHHHhccccccccccc
Confidence 9999999999999999999999999999999877777777776 5999999 899998866
Q ss_pred --------CCcHHHHHHHH------------------------------------HHHHHHHHHHHHHHHHhccCCCCCh
Q psy8846 475 --------ASEKDIVHSGL------------------------------------DYTMERSARAIMKTAMKYNLGHLDI 510 (568)
Q Consensus 475 --------~we~e~V~~~L------------------------------------~~~M~~a~~~V~~~a~~~~~~~~dl 510 (568)
+|..|+|+++| +++|.++|++|++++++++.+ +||
T Consensus 399 ~~~e~~~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~ga~e~d~v~sgL~~~m~~a~~~v~~~a~~~~~~-~~l 477 (501)
T 3mw9_A 399 FKYERDSNYHLLMSVQESLERKFGKHGGTIPIVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMRTAMKYNLG-LDL 477 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTTTCCCCCCCCHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT-TCH
T ss_pred hhhhcccccccHHHHHHHHHhhhcccccccccCchHHHHHHHcCCcHHHHHHHhHHHHHHHHHHHHHHHHHHhCCC-CCH
Confidence 37666555554 555999999999999999854 799
Q ss_pred hhhhhhheee-c-ccCccccee
Q psy8846 511 NAHACVTGKP-I-NQGGIHGRI 530 (568)
Q Consensus 511 R~AAyi~Ai~-i-~a~~~~G~~ 530 (568)
|+|||++||. | +++..+|+.
T Consensus 478 RtAAy~~ai~rv~~a~~~~G~~ 499 (501)
T 3mw9_A 478 RTAAYVNAIEKVFRVYNEAGVT 499 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHcCcc
Confidence 9999999999 7 999999975
No 2
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=100.00 E-value=1e-84 Score=695.44 Aligned_cols=333 Identities=26% Similarity=0.412 Sum_probs=313.9
Q ss_pred CCCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhhhhhhhcCCCCcEEEEEEeEEcCCCcEEEEeeEEEEecCC
Q psy8846 172 NPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHSTH 251 (568)
Q Consensus 172 ~~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I~~~I~~~~rv~~v~~pv~~d~G~~~~~~gyrv~h~~~ 251 (568)
++++|++++.++++|+.+++. .+++++.|.+|+|+++|++||.+|+|++++|+|||||||++
T Consensus 14 ~~~~~~~~~~~~~~a~~~~~~------------------~~~~~~~l~~p~r~~~~~vp~~~d~G~~~v~~GyRvqhn~a 75 (424)
T 3k92_A 14 ALNLFLSTQTIIKEALRKLGY------------------PGDMYELMKEPQRMLTVRIPVKMDNGSVKVFTGYRSQHNDA 75 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC------------------CHHHHHHHSSCSEEEEEEEEEECTTSCEEEEEEEEEECCCS
T ss_pred cCCHHHHHHHHHHHHHHHcCC------------------CHHHHHHhcCCCeEEEEEEEEEecCCcEEEEEEEEEEECCc
Confidence 356899999999999999993 69999999999999999999999999999999999999999
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHHhhHhhhhcCCCCCCceeEeeCCCCCCCHHHHHHHHHHHHHHHhhcCccccccCCC
Q psy8846 252 RTPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331 (568)
Q Consensus 252 ~GP~kGGiR~~p~v~~dev~aLA~~MT~K~Al~~lP~GGaKggI~~dP~~~s~~Eler~~r~f~~~L~~~~~iGp~~dip 331 (568)
+||+||||||||++|++||++||+||||||||+|||||||||||.+||+.+|+.|+||+||+|+++|.+ ++||+.|||
T Consensus 76 ~GP~kGGiR~~p~v~~~ev~~La~~mt~KnAl~~lP~GGgKggi~~DP~~~s~~El~r~~r~f~~~l~~--~iG~~~dip 153 (424)
T 3k92_A 76 VGPTKGGVRFHPEVNEEKVKALSIWMTLKCGIANLPYGGGKGGIICDPRTMSFGELERLSRGYVRAISQ--IVGPTKDIP 153 (424)
T ss_dssp SSSEECCEEEETTCCHHHHHHHHHHHHHHHHHTTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGG--GCBTTTEEC
T ss_pred CCCCCCCeEecCCCCHHHHHHHHHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHHHHHHHHH--hcCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999998 999999999
Q ss_pred CCc----ccccch---hhhcccCc------------------e----------------------------eec--cCHH
Q psy8846 332 GAR----AREGNV---TFNLLFHY------------------K----------------------------FSS--GPVS 356 (568)
Q Consensus 332 apD----~~~maw---~y~~~~G~------------------R----------------------------~~~--GnVG 356 (568)
+|| +++|+| +|+++.|+ | .+| ||||
T Consensus 154 ApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG 233 (424)
T 3k92_A 154 APDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGVTICIEEAVKKKGIKLQNARIIIQGFGNAG 233 (424)
T ss_dssp CBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHH
T ss_pred CCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHHHHHHHHHHHHcCCCcccCEEEEECCCHHH
Confidence 999 899999 88654321 1 122 9999
Q ss_pred HHHHHHHHHCCCeEeEeCCC--------CCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCCCChhh
Q psy8846 357 MYLPQIWVQEKGKCPGLPTH--------TRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNN 428 (568)
Q Consensus 357 ~~~A~~L~~~GakvvaVsD~--------GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~It~~n 428 (568)
+++|++|++.|||||+|||+ |||+++|.++++++|+|.+|+ ++.++++++|+++||||+|||++|+||++|
T Consensus 234 ~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~-a~~~~~~~i~~~~~DIliPcA~~n~I~~~~ 312 (424)
T 3k92_A 234 SFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLF-TDVITNEELLEKDCDILVPAAISNQITAKN 312 (424)
T ss_dssp HHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGC-SCCBCHHHHHHSCCSEEEECSCSSCBCTTT
T ss_pred HHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCC-cEEecCccceeccccEEeecCcccccChhh
Confidence 99999999999999999999 999999999999999999998 888999999999999999999999999999
Q ss_pred HhcccceEEEecCCcchHHHHHHHhccCCCcccccCc-------------HHHHhhccCCCcHHHHHHHHHHHHHHHHHH
Q psy8846 429 AHKIQAKIIAEAANESVQESLERRFGNVGGRIPVTPS-------------ESFQKRISGASEKDIVHSGLDYTMERSARA 495 (568)
Q Consensus 429 a~~i~AkiIvE~AN~~~~~~l~~~l~~~GggI~vvPd-------------e~~q~~~~~~we~e~V~~~L~~~M~~a~~~ 495 (568)
|++|+||+||||||+|+++.+.+.|.++ ||.|+|| ||+||.++.+|++|+|+++|+++|.++|++
T Consensus 313 a~~l~ak~V~EgAN~p~t~eA~~iL~~r--GI~~~PD~~aNAGGV~vS~~E~~qn~~~~~w~~eeV~~~l~~~m~~~~~~ 390 (424)
T 3k92_A 313 AHNIQASIVVERANGPTTIDATKILNER--GVLLVPDILASAGGVTVSYFEWVQNNQGYYWSEEEVAEKLRSVMVSSFET 390 (424)
T ss_dssp GGGCCCSEEECCSSSCBCHHHHHHHHHT--TCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HhhcCceEEEcCCCCCCCHHHHHHHHHC--CCEEECchHhcCCCEEeehhHHHhcccccCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999877777777777 5999999 888999999999999999999999999999
Q ss_pred HHHHHHhccCCCCChhhhhhhheee-c-ccCccccee
Q psy8846 496 IMKTAMKYNLGHLDINAHACVTGKP-I-NQGGIHGRI 530 (568)
Q Consensus 496 V~~~a~~~~~~~~dlR~AAyi~Ai~-i-~a~~~~G~~ 530 (568)
|++++++++ +++|+|||++|+. | ++|..+||+
T Consensus 391 v~~~a~~~~---~~~~~aA~~~a~~rva~a~~~~G~~ 424 (424)
T 3k92_A 391 IYQTAATHK---VDMRLAAYMTGIRKSAEASRFRGWV 424 (424)
T ss_dssp HHHHHHHHT---CCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhC---cCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999998 7999999999999 7 999999986
No 3
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=100.00 E-value=1.3e-83 Score=689.70 Aligned_cols=340 Identities=24% Similarity=0.322 Sum_probs=309.4
Q ss_pred CCCCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhhhhhhhcCCCCcEEEEEEeEEcCCCcEEEEeeEEEEecC
Q psy8846 171 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHST 250 (568)
Q Consensus 171 ~~~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I~~~I~~~~rv~~v~~pv~~d~G~~~~~~gyrv~h~~ 250 (568)
.++.|++++..++++++.+++.. |+ | .++++.|.+|+|+++|++||.+|+|++++|+|||||||+
T Consensus 29 ~~~ef~qa~~e~~~~~~~~~~~~----------p~----~-~~~~~~l~~P~r~i~~~vp~~~D~G~~~v~~GyRvqhn~ 93 (456)
T 3r3j_A 29 NEPEFLQAFEEVLSCLKPVFKKD----------NV----Y-IGVLENIAEPERVIQFRVPWINDKGEHKMNRGFRVQYNS 93 (456)
T ss_dssp TCHHHHHHHHHHHHHTHHHHHHC----------TH----H-HHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEEC
T ss_pred CCCcHHHHHHHHHHHHHHHHhhC----------hH----h-hHHHHhccCCceEEEEEEEEEeCCCcEEEEEEEEEEECC
Confidence 78899999999999999999843 12 1 278999999999999999999999999999999999999
Q ss_pred CCCCCCCCeeeeCCCCHHHHHHHHHHhhHhhhhcCCCCCCceeEeeCCCCCCCHHHHHHHHHHHHHHHhhcCccccccCC
Q psy8846 251 HRTPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAV 330 (568)
Q Consensus 251 ~~GP~kGGiR~~p~v~~dev~aLA~~MT~K~Al~~lP~GGaKggI~~dP~~~s~~Eler~~r~f~~~L~~~~~iGp~~di 330 (568)
++||+||||||||++|++|+++||+||||||||+|||||||||||.+||+.+|+.|++|+||+|+++|.+ +|||+.||
T Consensus 94 a~GPakGGiR~~p~v~~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~DPk~~s~~el~r~~r~f~~eL~~--~iGp~~Dv 171 (456)
T 3r3j_A 94 VLGPYKGGLRFHPAVNLSVIKFLGFEQIFKNSLTTLPMGGGKGGSDFDPKGKSENEILKFCQSFMTNLFR--YIGPNTDV 171 (456)
T ss_dssp SSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHHTSSCCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGG--GCBTTTEE
T ss_pred cCCCccCceEecCCCCHHHHHHHHHHHHHHHHhcCCCCCcceeEEecCCCCCCHHHHHHHHHHHHHHHHH--hcCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999987 89999999
Q ss_pred CCCc----ccccch---hhhccc--------Cc---------e----------------------------eec--cCHH
Q psy8846 331 PGAR----AREGNV---TFNLLF--------HY---------K----------------------------FSS--GPVS 356 (568)
Q Consensus 331 papD----~~~maw---~y~~~~--------G~---------R----------------------------~~~--GnVG 356 (568)
|+|| +++|+| +|+++. |. | .+| ||||
T Consensus 172 pApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~VaVQG~GnVG 251 (456)
T 3r3j_A 172 PAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVYFAENVLKDLNDNLENKKCLVSGSGNVA 251 (456)
T ss_dssp EECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHHHHHHHHHTTTCCSTTCCEEEECCSHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHHHHHHHHHHcCCCccCCEEEEECCCHHH
Confidence 9999 899999 776432 11 1 122 9999
Q ss_pred HHHHHHHHHCCCeEeEeCCC--------CCCHHHHHHH---HHhc-CCcccC----CCCeecCCCCcccccceEEeeccc
Q psy8846 357 MYLPQIWVQEKGKCPGLPTH--------TRKPLALEEY---KLDN-GTIVGF----PGAVPYEGENLMYEPCDIFVPAAV 420 (568)
Q Consensus 357 ~~~A~~L~~~GakvvaVsD~--------GiD~~~L~~~---~~~~-g~v~~~----~ga~~i~~~~ll~~~cDIliPaAl 420 (568)
+++|++|++.|||||+|||+ |||+++|.++ ++++ ++|.+| |+++.++++++|+++||||+|||+
T Consensus 252 ~~aa~~L~e~GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~~v~~~~i~~~~~DI~iPcA~ 331 (456)
T 3r3j_A 252 QYLVEKLIEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAKYFENQKPWNIPCDIAFPCAT 331 (456)
T ss_dssp HHHHHHHHHHTCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCEEECSCCGGGSCCSEEEECSC
T ss_pred HHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCceEeCCccccccCccEEEeCCC
Confidence 99999999999999999998 9999999865 4444 456665 899999999999999999999999
Q ss_pred cCCCChhhHhcc---cceEEEecCCcchHHHHHHHhccCCCcccccCc-------------HHHHhhccCCCcHHHHHHH
Q psy8846 421 EKVITKNNAHKI---QAKIIAEAANESVQESLERRFGNVGGRIPVTPS-------------ESFQKRISGASEKDIVHSG 484 (568)
Q Consensus 421 ~~~It~~na~~i---~AkiIvE~AN~~~~~~l~~~l~~~GggI~vvPd-------------e~~q~~~~~~we~e~V~~~ 484 (568)
+++||++||++| +||+||||||+|+++...+.|.++ ||.|+|| ||.||.++.+|++|+|+++
T Consensus 332 ~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA~~iL~~r--GI~~~PD~~aNAGGV~vS~~E~~qn~~~~~w~~eeV~~~ 409 (456)
T 3r3j_A 332 QNEINENDADLFIQNKCKMIVEGANMPTHIKALHKLKQN--NIILCPSKAANAGGVAVSGLEMSQNSMRLQWTHQETDMK 409 (456)
T ss_dssp TTCBCHHHHHHHHHHTCCEEECCSSSCBCTTHHHHHHTT--TCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred ccchhhHHHHHHHhcCCeEEEecCCCCCCHHHHHHHHHC--CCEEeChHHhcCCceeeehHHHhhcccccCCCHHHHHHH
Confidence 999999999999 899999999999876666666666 5899999 8999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCChhhhhhhheee-c-ccCccccee
Q psy8846 485 LDYTMERSARAIMKTAMKYNLGHLDINAHACVTGKP-I-NQGGIHGRI 530 (568)
Q Consensus 485 L~~~M~~a~~~V~~~a~~~~~~~~dlR~AAyi~Ai~-i-~a~~~~G~~ 530 (568)
|+++|.++|+++++++++++.. .|||+|||++|+. | +||..+|+.
T Consensus 410 L~~im~~~~~~~~~~a~~~~~~-~~~r~aA~i~~~~rva~a~~~~G~~ 456 (456)
T 3r3j_A 410 LQNIMKSIYEQCHNTSKIYLNE-SDLVAGANIAGFLKVADSFLEQGGL 456 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CCHHHhccHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999832 3999999999999 7 999999973
No 4
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=100.00 E-value=6.1e-83 Score=684.98 Aligned_cols=351 Identities=26% Similarity=0.410 Sum_probs=320.4
Q ss_pred ccCCcccchhhhccCCCCCCCCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhhhhhhhcCCCCcEEEEEEeEE
Q psy8846 153 QQRNLHDIPEKLKDIPTAENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVR 232 (568)
Q Consensus 153 ~~~~~~~l~~t~k~~~T~~~~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I~~~I~~~~rv~~v~~pv~ 232 (568)
..+.++.+++.++++.+. ++|++++..++++++.+++. .+++++.|.+|+|++.|++||.
T Consensus 11 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~P~r~i~~~~p~~ 70 (440)
T 3aog_A 11 SQDPNSMKSEPLSYLGKD--GGPWEIFTEQVDRVVPYLGR------------------LAPLAESLKRPKRVLIVDVPVR 70 (440)
T ss_dssp ---------CCCGGGTTC--CTHHHHHHHHHHHHGGGCGG------------------GGGGGGGGGSCSEEEEEEEEEE
T ss_pred cCCcccccchhhhccCCC--CCHHHHHHHHHHHHHHHhCC------------------CHHHHHHhcCCCeEEEEEEEEE
Confidence 457788888889888754 88999999999999999994 4779999999999999999999
Q ss_pred cCCCcEEEEeeEEEEecCCCCCCCCCeeeeCCCCHHHHHHHHHHhhHhhhhcCCCCCCceeEeeCCCCCCCHHHHHHHHH
Q psy8846 233 RDSGDYEIITGYRAQHSTHRTPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGGAKAGIKINPKNYSENELEKITR 312 (568)
Q Consensus 233 ~d~G~~~~~~gyrv~h~~~~GP~kGGiR~~p~v~~dev~aLA~~MT~K~Al~~lP~GGaKggI~~dP~~~s~~Eler~~r 312 (568)
||+|++++|+|||||||+++||+||||||||++|++||++||+||||||||+|||||||||||.+||+.+|+.|+||+||
T Consensus 71 ~D~G~~~~~~G~rvqhn~a~GPakGGiR~~p~v~~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~dP~~~s~~Eler~~r 150 (440)
T 3aog_A 71 LDDGSVAYFEGYRVHHNTARGPAKGGVRYHPEVTLSEVMALAGWMTIKNAAVGLPYGGGKGGIRVDPRKLSPGELERLTR 150 (440)
T ss_dssp CTTSCEEEEEEEEEEEECTTSSEECCEEECTTCCHHHHHHHHHHHHHHHHHHTCSCCEEEEEEECCGGGSCHHHHHHHHH
T ss_pred ecCCCEEEEEEEEEEECCCCCCCcCCeEEEecCCHHHHHHHHHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCccccccCCCCCc----ccccch---hhhcccCc------------------e------------------
Q psy8846 313 RFTLELAKKGFIGEFKAVPGAR----AREGNV---TFNLLFHY------------------K------------------ 349 (568)
Q Consensus 313 ~f~~~L~~~~~iGp~~dipapD----~~~maw---~y~~~~G~------------------R------------------ 349 (568)
+|+++|.+ ++||+.|||||| +++|+| +|+++.|+ |
T Consensus 151 ~f~~~l~~--~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~ 228 (440)
T 3aog_A 151 RYTSEIGI--LLGPDRDIPAPDVNTGEREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVFITAAAAAEK 228 (440)
T ss_dssp HHHHHHGG--GCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH--hcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHHHHHHHHHHHh
Confidence 99999998 999999999999 899999 88653221 1
Q ss_pred ---------e-ec--cCHHHHHHHHHHHCCCeEeEeCCC--------CCCHHHHHHHHHhcCCcccCCCCeecCCCCccc
Q psy8846 350 ---------F-SS--GPVSMYLPQIWVQEKGKCPGLPTH--------TRKPLALEEYKLDNGTIVGFPGAVPYEGENLMY 409 (568)
Q Consensus 350 ---------~-~~--GnVG~~~A~~L~~~GakvvaVsD~--------GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~ 409 (568)
+ ++ ||||+++|++|++.|+|||+|||+ |||+++|.++++++|+|.+|++++.++++++|+
T Consensus 229 ~g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~ 308 (440)
T 3aog_A 229 IGLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWG 308 (440)
T ss_dssp HTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTT
T ss_pred cCCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhc
Confidence 1 12 999999999999999999999999 999999999999999999999999998889999
Q ss_pred ccceEEeeccccCCCChhhHhcccceEEEecCCcchHHHHHHHhccCCCcccccCc-------------HHHHhhccCCC
Q psy8846 410 EPCDIFVPAAVEKVITKNNAHKIQAKIIAEAANESVQESLERRFGNVGGRIPVTPS-------------ESFQKRISGAS 476 (568)
Q Consensus 410 ~~cDIliPaAl~~~It~~na~~i~AkiIvE~AN~~~~~~l~~~l~~~GggI~vvPd-------------e~~q~~~~~~w 476 (568)
.+||||+|||++|+||.+||++|+||+||||||+|+++...+.|.++ ||.|+|| ||+||.++.+|
T Consensus 309 ~~~DIlvPcA~~n~i~~~na~~l~ak~VvEgAN~p~t~eA~~iL~~~--GI~~~PD~~aNaGGV~vS~~E~~qN~~~~~w 386 (440)
T 3aog_A 309 LPVEFLVPAALEKQITEQNAWRIRARIVAEGANGPTTPAADDILLEK--GVLVVPDVIANAGGVTVSYFEWVQDFNSYFW 386 (440)
T ss_dssp CCCSEEEECSSSSCBCTTTGGGCCCSEEECCSSSCBCHHHHHHHHHH--TCEEECHHHHTTHHHHHHHHHHHHHTTTCCC
T ss_pred CCCcEEEecCCcCccchhhHHHcCCcEEEecCccccCHHHHHHHHHC--CCEEEChHHHhCCCceEEEEEEEecCccCcC
Confidence 99999999999999999999999999999999999876666666665 5888999 89999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhhhhheee-c-ccCccccee
Q psy8846 477 EKDIVHSGLDYTMERSARAIMKTAMKYNLGHLDINAHACVTGKP-I-NQGGIHGRI 530 (568)
Q Consensus 477 e~e~V~~~L~~~M~~a~~~V~~~a~~~~~~~~dlR~AAyi~Ai~-i-~a~~~~G~~ 530 (568)
++|+|+++|+++|.++|++++++|++++ +|+|+|||++|+. | ++|..+||+
T Consensus 387 ~~eev~~~l~~im~~~~~~v~~~a~~~~---~~~~~aA~~~a~~rva~a~~~~G~~ 439 (440)
T 3aog_A 387 TEEEINARLERVLRNAFEAVWQVAQEKK---IPLRTAAYVVAATRVLEARALRGLY 439 (440)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHT---CCHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHC---cCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999998 7999999999999 7 999999986
No 5
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=100.00 E-value=5.9e-81 Score=671.90 Aligned_cols=340 Identities=23% Similarity=0.270 Sum_probs=311.1
Q ss_pred CCCCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhhhhhhhcCCCCcEEEEEEeEEcCCCcEEEEeeEEEEecC
Q psy8846 171 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHST 250 (568)
Q Consensus 171 ~~~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I~~~I~~~~rv~~v~~pv~~d~G~~~~~~gyrv~h~~ 250 (568)
.+|.|++++..++++++.+++.. |+ |. ++++.|.+|+|++.|++||.+|+|++++|+|||||||+
T Consensus 42 ~~~e~~~~~~~~~~~~~~~~~~~----------p~----~~-~~le~l~~Per~i~~~vp~~~D~G~v~v~~Gyrvqhn~ 106 (470)
T 2bma_A 42 NQVEFLQAFHEILYSLKPLFMEE----------PK----YL-PIIETLSEPERAIQFRVCWLDDNGVQRKNRCFRVQYNS 106 (470)
T ss_dssp TCHHHHHHHHHHHHHTHHHHHHC----------TT----HH-HHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEEC
T ss_pred CCchHHHHHHHHHHHHHHHhccC----------hh----hh-HHHHHhcCCceEEEEEEEEEeCCCCEEEEEEEEEEECC
Confidence 68999999999999999999842 11 11 89999999999999999999999999999999999999
Q ss_pred CCCCCCCCeeeeCCCCHHHHHHHHHHhhHhhhhcCCCCCCceeEeeCCCCCCCHHHHHHHHHHHHHHHhhcCccccccCC
Q psy8846 251 HRTPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAV 330 (568)
Q Consensus 251 ~~GP~kGGiR~~p~v~~dev~aLA~~MT~K~Al~~lP~GGaKggI~~dP~~~s~~Eler~~r~f~~~L~~~~~iGp~~di 330 (568)
++||+||||||||+++++|+++||+||||||||+|||||||||||.+||+.+|+.|++|+||+|+++|.+ +|||+.||
T Consensus 107 a~GPakGGiR~hp~v~~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~DPk~~S~~El~r~~r~f~~~L~~--~iGp~~Dv 184 (470)
T 2bma_A 107 ALGPYKGGLRFHPSVNLSIVKFLGFEQIFKNSLTGLSMGGGKGGSDFDPKGKSDNEILKFCQAFMNELYR--HIGPCTDV 184 (470)
T ss_dssp SSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHHTCSSCEEEEEEESCCCTTCCHHHHHHHHHHHHHHHGG--GCBTTTEE
T ss_pred CCCCCCCCeEeeCCCCHHHHHHHHHHHHHHHHhcCCCCCCcceEEeCCCCcCCHHHHHHHHHHHHHHhhh--ccCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 89999999
Q ss_pred CCCc----ccccch---hhhcccCc-----------------e----------------------------eec--cCHH
Q psy8846 331 PGAR----AREGNV---TFNLLFHY-----------------K----------------------------FSS--GPVS 356 (568)
Q Consensus 331 papD----~~~maw---~y~~~~G~-----------------R----------------------------~~~--GnVG 356 (568)
|+|| +++|+| +|+++.|+ | .+| ||||
T Consensus 185 pApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~~~~~l~~~G~~l~g~~vaVqG~GnVG 264 (470)
T 2bma_A 185 PAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYFVLEVLKSLNIPVEKQTAVVSGSGNVA 264 (470)
T ss_dssp EECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHTTTCCGGGCEEEEECSSHHH
T ss_pred cCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHHHHHHHHhccCCcCCCEEEEECCcHHH
Confidence 9999 899999 88764221 1 122 9999
Q ss_pred HHHHHHHHHCCCeEeEeCCC--------CC---CHHHHHHHHHhc-CCcccC----CCCeecCCCCcccccceEEeeccc
Q psy8846 357 MYLPQIWVQEKGKCPGLPTH--------TR---KPLALEEYKLDN-GTIVGF----PGAVPYEGENLMYEPCDIFVPAAV 420 (568)
Q Consensus 357 ~~~A~~L~~~GakvvaVsD~--------Gi---D~~~L~~~~~~~-g~v~~~----~ga~~i~~~~ll~~~cDIliPaAl 420 (568)
+++|++|++.|||||+|||+ || |++.|.++++++ |+|.+| |+++.++++++|+++||||+|||+
T Consensus 265 ~~~a~~L~~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v~~~~~~~~~~DI~iPcA~ 344 (470)
T 2bma_A 265 LYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYFPNEKPWGVPCTLAFPCAT 344 (470)
T ss_dssp HHHHHHHHHTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEECSSCCTTSSCCSEEEECSS
T ss_pred HHHHHHHHHCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEecCcCeeecCccEEEeccc
Confidence 99999999999999999998 99 555677777775 789888 478999989999999999999999
Q ss_pred cCCCChhhHhcc---cceEEEecCCcchHHHHHHHhccCCCcccccCc-------------HHHHhhccCCCcHHHHHHH
Q psy8846 421 EKVITKNNAHKI---QAKIIAEAANESVQESLERRFGNVGGRIPVTPS-------------ESFQKRISGASEKDIVHSG 484 (568)
Q Consensus 421 ~~~It~~na~~i---~AkiIvE~AN~~~~~~l~~~l~~~GggI~vvPd-------------e~~q~~~~~~we~e~V~~~ 484 (568)
+++||.+||++| +||+||||||+|+++...+.|.++ ||+|+|| ||.||.++.+|++|+|+++
T Consensus 345 ~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA~~~L~~r--GIl~~PD~~aNAGGV~~S~~E~~qn~~~~~w~~eev~~~ 422 (470)
T 2bma_A 345 QNDVDLDQAKLLQKNGCILVGEGANMPSTVDAINLFKSN--NIIYCPSKAANAGGVAISGLEMSQNFQFSHWTRETVDEK 422 (470)
T ss_dssp TTCBCSHHHHHHHHTTCCEEECCSSSCBCHHHHHHHHHT--TCEEECHHHHTTHHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred cCcCCHHHHHHHHhcCcEEEEeCCCCCCCHHHHHHHHHC--CcEEEChHHhhCCCceeeHHHhhccccccCCCHHHHHHH
Confidence 999999999999 999999999999877777777777 5899999 8999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCC-Chhhhhhhheee-c-ccCccccee
Q psy8846 485 LDYTMERSARAIMKTAMKYNLGHL-DINAHACVTGKP-I-NQGGIHGRI 530 (568)
Q Consensus 485 L~~~M~~a~~~V~~~a~~~~~~~~-dlR~AAyi~Ai~-i-~a~~~~G~~ 530 (568)
|+.+|.++|+.+++++++++.. . |||+|||+.|+. | +||..+||+
T Consensus 423 L~~im~~~~~~~~~~a~~~~~~-~~~~r~~A~i~~~~rva~am~~~G~~ 470 (470)
T 2bma_A 423 LKEIMRNIFIACSENALKYTKN-KYDLQAGANIAGFLKVAESYIEQGCF 470 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSC-SSCHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999832 2 999999999999 7 999999985
No 6
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=100.00 E-value=7.2e-81 Score=668.83 Aligned_cols=341 Identities=22% Similarity=0.265 Sum_probs=307.2
Q ss_pred CCCCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhhhhhhhcCCCCcEEEEEEeEEcCCCcEEEEeeEEEEecC
Q psy8846 171 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHST 250 (568)
Q Consensus 171 ~~~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I~~~I~~~~rv~~v~~pv~~d~G~~~~~~gyrv~h~~ 250 (568)
.++.|++.+...+..-..+++.+ |+. ...+|++.|..|+|+++|++||.||+|++++|+|||||||+
T Consensus 23 ~~~ef~qa~~e~~~~l~~~~~~~----------p~y---~~~~~~e~l~~PeR~i~~~vp~~~D~G~~~v~~GyRvqhn~ 89 (450)
T 4fcc_A 23 NQTEFAQAVREVMTTLWPFLEQN----------PKY---RQMSLLERLVEPERVIQFRVVWVDDRNQVQVNRAWRVQFSS 89 (450)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHC----------GGG---TSTTHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEEC
T ss_pred CChHHHHHHHHHHHHHHHHHHhC----------hhh---hhhhHHHHHhCCceEEEEEEEEEECCCcEEEEEEEEEEECC
Confidence 67789999999999888888743 221 23679999999999999999999999999999999999999
Q ss_pred CCCCCCCCeeeeCCCCHHHHHHHHHHhhHhhhhcCCCCCCceeEeeCCCCCCCHHHHHHHHHHHHHHHhhcCccccccCC
Q psy8846 251 HRTPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAV 330 (568)
Q Consensus 251 ~~GP~kGGiR~~p~v~~dev~aLA~~MT~K~Al~~lP~GGaKggI~~dP~~~s~~Eler~~r~f~~~L~~~~~iGp~~di 330 (568)
++||+||||||||++|++||++||+||||||||+|||||||||||.+||+.+|+.|++|+||+|+.+|.+ +|||++||
T Consensus 90 alGP~kGG~Rfhp~v~l~ev~~La~~mT~KnAl~gLP~GGgKggi~~DPk~~s~~El~R~~~~f~~eL~~--~iG~d~dv 167 (450)
T 4fcc_A 90 AIGPYKGGMRFHPSVNLSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYR--HLGADTDV 167 (450)
T ss_dssp SSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTSSCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGG--GCBTTTEE
T ss_pred CCCCCCCceEecCCCCHHHHHHHHHHHHHHHHHcCCCCCCCceEEecCCCcCCHHHHHHHHHHHHHHhhh--eecCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988 89999999
Q ss_pred CCCc----ccccch---hhhccc--------C-------c--e----------------------------eec--cCHH
Q psy8846 331 PGAR----AREGNV---TFNLLF--------H-------Y--K----------------------------FSS--GPVS 356 (568)
Q Consensus 331 papD----~~~maw---~y~~~~--------G-------~--R----------------------------~~~--GnVG 356 (568)
|+|| +++|+| +|+++. | + | .+| ||||
T Consensus 168 pa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~~~~l~Gk~vaVQG~GnVG 247 (450)
T 4fcc_A 168 PAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYFTEAMLKRHGMGFEGMRVSVSGSGNVA 247 (450)
T ss_dssp EECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCSTTCEEEEECCSHHH
T ss_pred CccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeHHHHHHHHHHHcCCCcCCCEEEEeCCChHH
Confidence 9999 999999 675432 1 1 1 122 9999
Q ss_pred HHHHHHHHHCCCeEeEeCCC--------CCCHHHHHHHHHh----cCCcccCC---CCeecCCCCcccccceEEeecccc
Q psy8846 357 MYLPQIWVQEKGKCPGLPTH--------TRKPLALEEYKLD----NGTIVGFP---GAVPYEGENLMYEPCDIFVPAAVE 421 (568)
Q Consensus 357 ~~~A~~L~~~GakvvaVsD~--------GiD~~~L~~~~~~----~g~v~~~~---ga~~i~~~~ll~~~cDIliPaAl~ 421 (568)
+++|++|++.|||||+|||+ |||+++|.++++. +|++.+|+ +++.++++++|+++||||+|||++
T Consensus 248 ~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl~ 327 (450)
T 4fcc_A 248 QYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQ 327 (450)
T ss_dssp HHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSCT
T ss_pred HHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEecCcccccCCccEEeecccc
Confidence 99999999999999999998 9999999888763 35666653 788999999999999999999999
Q ss_pred CCCChhhHhcccc---eEEEecCCcchHHHHHHHhccCCCcccccCc-------------HHHHhhccCCCcHHHHHHHH
Q psy8846 422 KVITKNNAHKIQA---KIIAEAANESVQESLERRFGNVGGRIPVTPS-------------ESFQKRISGASEKDIVHSGL 485 (568)
Q Consensus 422 ~~It~~na~~i~A---kiIvE~AN~~~~~~l~~~l~~~GggI~vvPd-------------e~~q~~~~~~we~e~V~~~L 485 (568)
|+||.+||++|+| |+|+||||+|+++...+.|.++ ||+|+|| ||+||.++.+|++|+|+++|
T Consensus 328 ~~I~~~~a~~L~a~g~k~IaEgAN~p~t~eA~~iL~~r--GIl~~PD~~aNAGGVi~S~~E~~qn~~~~~w~~eeV~~kL 405 (450)
T 4fcc_A 328 NELDVDAAHQLIANGVKAVAEGANMPTTIEATELFQQA--GVLFAPGKAANAGGVATSGLEMAQNAARLGWKAEKVDARL 405 (450)
T ss_dssp TCBCHHHHHHHHHTTCCEEECCSSSCBCHHHHHHHHHT--TCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred ccccHHHHHHHHhcCceEEecCCCCCCCHHHHHHHHHC--CCEEEChHHhcCccHhhhHHHHhhhcccCCCCHHHHHHHH
Confidence 9999999999985 9999999999877766666666 5899999 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCChhhhhhhheee-c-ccCccccee
Q psy8846 486 DYTMERSARAIMKTAMKYNLGHLDINAHACVTGKP-I-NQGGIHGRI 530 (568)
Q Consensus 486 ~~~M~~a~~~V~~~a~~~~~~~~dlR~AAyi~Ai~-i-~a~~~~G~~ 530 (568)
+++|.++|+.+++++++.+. +|+|+|||+.|+. | +||..+|+.
T Consensus 406 ~~im~~~~~~~~~~~~e~~~--~~~~~aA~i~a~~rVa~Am~~~G~v 450 (450)
T 4fcc_A 406 HHIMLDIHHACVEHGGEGEQ--TNYVQGANIAGFVKVADAMLAQGVI 450 (450)
T ss_dssp HHHHHHHHHHHHHTSCSSSS--CCHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999877542 7999999999999 8 999999974
No 7
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=100.00 E-value=2.9e-80 Score=661.62 Aligned_cols=331 Identities=24% Similarity=0.331 Sum_probs=309.2
Q ss_pred CCCCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhhhhhhhcCCCCcEEEEEEeEEcCCCcEEEEeeEEEEecC
Q psy8846 171 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHST 250 (568)
Q Consensus 171 ~~~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I~~~I~~~~rv~~v~~pv~~d~G~~~~~~gyrv~h~~ 250 (568)
.+++||+++..++++++.+++. .+++++.|.+|+|++.|++||.||+|++++|+|||||||+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~P~r~i~~~~p~~~D~G~~~~~~g~rv~hn~ 71 (419)
T 3aoe_E 10 EDPGLWDTYLEWLERALKVAGV------------------HPTTLEYLAHPKRLVTLSLPVVMDDGKVRIFQGYRVVHDI 71 (419)
T ss_dssp SCCHHHHHHHHHHHHHHTTSCC------------------CHHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHhCC------------------CHHHHhhcCCCCeEEEEEEEEEecCCCEEEEEEEEEEECC
Confidence 5667999999999999999994 4779999999999999999999999999999999999999
Q ss_pred CCCCCCCCeeeeCCCCHHHHHHHHHHhhHhhhhcCCCCCCceeEeeCCCCCCCHHHHHHHHHHHHHHHhhcCccccccCC
Q psy8846 251 HRTPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAV 330 (568)
Q Consensus 251 ~~GP~kGGiR~~p~v~~dev~aLA~~MT~K~Al~~lP~GGaKggI~~dP~~~s~~Eler~~r~f~~~L~~~~~iGp~~di 330 (568)
++||+||||||||++|++||++||+||||||||+|||||||||||.+||+.+|+.|+||+||+|+++|.+ ++||+.||
T Consensus 72 ~~GPakGGiR~~p~v~~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~dP~~~s~~El~r~~r~f~~~l~~--~iGp~~dv 149 (419)
T 3aoe_E 72 ARGPAKGGVRLDPGVTLGQTAGLAAWMTLKAAVYDLPFGGAAGGIAVDPKGLSPQELERLVRRYTAELVG--LIGPDSDI 149 (419)
T ss_dssp SSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCSCEEEEEEECSCGGGSCHHHHHHHHHHHHHHHTT--TCBTTTEE
T ss_pred CCCCCcCCeEecCCCCHHHHHHHHHHHHHHHHhccCCCCCccEEEecCCCCCCHHHHHHHHHHHHHHHHH--hcCCCCEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 89999999
Q ss_pred CCCc----ccccch---hhhcccCc------------------e----------------------------eec--cCH
Q psy8846 331 PGAR----AREGNV---TFNLLFHY------------------K----------------------------FSS--GPV 355 (568)
Q Consensus 331 papD----~~~maw---~y~~~~G~------------------R----------------------------~~~--GnV 355 (568)
|||| +++|+| +|+++.|+ | .++ |||
T Consensus 150 pA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~GnV 229 (419)
T 3aoe_E 150 LGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGALLVLEALAKRRGLDLRGARVVVQGLGQV 229 (419)
T ss_dssp EEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSHH
T ss_pred ECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHHHHHHHHHHhcCCCccCCEEEEECcCHH
Confidence 9999 899999 88653221 1 112 999
Q ss_pred HHHHHHHHHHCCCeEeEeCCC--------CCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCCCChh
Q psy8846 356 SMYLPQIWVQEKGKCPGLPTH--------TRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKN 427 (568)
Q Consensus 356 G~~~A~~L~~~GakvvaVsD~--------GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~It~~ 427 (568)
|+++|++|++.|||||+|||+ |||+++|.++++++|++.+| .++++++|+.+||||+|||++|+||.+
T Consensus 230 G~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~----~~~~~e~~~~~~DVliP~A~~n~i~~~ 305 (419)
T 3aoe_E 230 GAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRL----DLAPEEVFGLEAEVLVLAAREGALDGD 305 (419)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCC----CBCTTTGGGSSCSEEEECSCTTCBCHH
T ss_pred HHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCccee----eccchhhhccCceEEEecccccccccc
Confidence 999999999999999999999 99999999999999999988 567889999999999999999999999
Q ss_pred hHhcccceEEEecCCcchHHHHHHHhccCCCcccccCc-------------HHHHhhccCCCcHHHHHHHHHHHHHHHHH
Q psy8846 428 NAHKIQAKIIAEAANESVQESLERRFGNVGGRIPVTPS-------------ESFQKRISGASEKDIVHSGLDYTMERSAR 494 (568)
Q Consensus 428 na~~i~AkiIvE~AN~~~~~~l~~~l~~~GggI~vvPd-------------e~~q~~~~~~we~e~V~~~L~~~M~~a~~ 494 (568)
||++++||+|+||||+|+++...+.|.++ ||.|+|| ||+||.++..|++|+|+++|+++|.++++
T Consensus 306 ~A~~l~ak~V~EgAN~p~t~~A~~~L~~~--Gi~~~PD~~aNaGGV~~S~~E~~qn~~~~~w~~eev~~~l~~im~~~~~ 383 (419)
T 3aoe_E 306 RARQVQAQAVVEVANFGLNPEAEAYLLGK--GALVVPDLLSGGGGLLASYLEWVQDLNMFFWSPEEVRERFETRVARVVD 383 (419)
T ss_dssp HHTTCCCSEEEECSTTCBCHHHHHHHHHH--TCEEECHHHHTCHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHH
T ss_pred hHhhCCceEEEECCCCcCCHHHHHHHHHC--CCEEECHHHHhCCCchhhHHHHhhcccccCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999876666666666 5888999 89999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCChhhhhhhheee-c-ccCccccee
Q psy8846 495 AIMKTAMKYNLGHLDINAHACVTGKP-I-NQGGIHGRI 530 (568)
Q Consensus 495 ~V~~~a~~~~~~~~dlR~AAyi~Ai~-i-~a~~~~G~~ 530 (568)
+|+++|++++ +|+|+|||++|+. | ++|..+||+
T Consensus 384 ~v~~~a~~~~---~~~~~aA~~~a~~rv~~a~~~~G~~ 418 (419)
T 3aoe_E 384 AVCRRAERGG---LDLRMGALALALERLDEATRLRGVY 418 (419)
T ss_dssp HHHHHHHHHT---CCHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHC---cCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999998 7999999999999 7 999999986
No 8
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=100.00 E-value=1.6e-80 Score=664.80 Aligned_cols=333 Identities=29% Similarity=0.414 Sum_probs=290.3
Q ss_pred CCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhhhhhhhcCCCCcEEEEEEeEEcCCCcEEEEeeEEEEecCCC
Q psy8846 173 PKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHSTHR 252 (568)
Q Consensus 173 ~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I~~~I~~~~rv~~v~~pv~~d~G~~~~~~gyrv~h~~~~ 252 (568)
.++|+++..++++++.+++. .+++++.|.+|+|++.|++||.+|+|++++|+|||||||+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~p~r~i~~~~p~~~d~G~~~~~~g~rv~hn~~~ 66 (421)
T 2yfq_A 5 LNPLVAAQEKVRIACEKLGC------------------DPAVYELLKEPQRVIEISIPVKMDDGTVKVFKGWRSAHSSAV 66 (421)
T ss_dssp -CHHHHHHHHHHHHHHHHTC------------------CHHHHHHHSSCSEEEEEEEEEEETTTEEEEEEEEEEECCCSS
T ss_pred cCHHHHHHHHHHHHHHHhCC------------------CHHHHhhccCCceEEEEEEEEEecCCCEEEEEEEEEEECCCC
Confidence 46899999999999999994 478999999999999999999999999999999999999999
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHHhhHhhhhcCCCCCCceeEeeCCCCCCCHHHHHHHHHHHHHHHhhcCccccccCCCC
Q psy8846 253 TPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVPG 332 (568)
Q Consensus 253 GP~kGGiR~~p~v~~dev~aLA~~MT~K~Al~~lP~GGaKggI~~dP~~~s~~Eler~~r~f~~~L~~~~~iGp~~dipa 332 (568)
||+||||||||++|++|+++||+||||||||+|||||||||||.+||+.+|+.|+||+||+|+++|.+ ++||+.||||
T Consensus 67 GP~kGGiR~~p~v~~~ev~~La~~mt~KnAl~~lP~GGgKggi~~dP~~~s~~el~r~~r~f~~~l~~--~iG~~~dvpA 144 (421)
T 2yfq_A 67 GPSKGGVRFHPNVNMDEVKALSLWMTFKGGALGLPYGGGKGGICVDPAELSERELEQLSRGWVRGLYK--YLGDRIDIPA 144 (421)
T ss_dssp SSEEEEEEEESSCCHHHHHHHHHHHHHHHHHHTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGG--GCBTTTEEEE
T ss_pred CCCcCCEEeeCCCCHHHHHHHHHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHHHHHHHHH--hcCCCcEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 8999999999
Q ss_pred Cc----ccccch---hhhcc----------cCc---------e----------------------------eec--cCHH
Q psy8846 333 AR----AREGNV---TFNLL----------FHY---------K----------------------------FSS--GPVS 356 (568)
Q Consensus 333 pD----~~~maw---~y~~~----------~G~---------R----------------------------~~~--GnVG 356 (568)
|| +++|+| +|+++ +|. | .++ ||||
T Consensus 145 ~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG 224 (421)
T 2yfq_A 145 PDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGVAVVVRESAKRFGIKMEDAKIAVQGFGNVG 224 (421)
T ss_dssp ECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHHHHHHHHHHHHTTCCGGGSCEEEECCSHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHHHHHHHHHHHhcCCCccCCEEEEECcCHHH
Confidence 99 899999 77642 111 1 112 9999
Q ss_pred HHHHHHHHHCCCeEeEeCCC-------------CCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCC
Q psy8846 357 MYLPQIWVQEKGKCPGLPTH-------------TRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKV 423 (568)
Q Consensus 357 ~~~A~~L~~~GakvvaVsD~-------------GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~ 423 (568)
+++|++|++.|+|||+|||+ |||+++|.++++++|+|.+|++++.++++++|+++||||+|||++|+
T Consensus 225 ~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i~~~~~~~~~~DIliP~A~~n~ 304 (421)
T 2yfq_A 225 TFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERITDEEFWTKEYDIIVPAALENV 304 (421)
T ss_dssp HHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC---------------------CEEECSCSSC
T ss_pred HHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEeCccchhcCCccEEEEcCCcCc
Confidence 99999999999999999997 69999999999999999999999999999999999999999999999
Q ss_pred CChhhHhcccceEEEecCCcchHHHHHHHhccCCCcccccCc-------------HHHHhhccCCCcHHHHHHHHHHHHH
Q psy8846 424 ITKNNAHKIQAKIIAEAANESVQESLERRFGNVGGRIPVTPS-------------ESFQKRISGASEKDIVHSGLDYTME 490 (568)
Q Consensus 424 It~~na~~i~AkiIvE~AN~~~~~~l~~~l~~~GggI~vvPd-------------e~~q~~~~~~we~e~V~~~L~~~M~ 490 (568)
||.+||++|+||+||||||+|+++...+.|.++ ||.|+|| ||+||.++.+|++|+|+++|+++|.
T Consensus 305 i~~~~A~~l~ak~VvEgAN~P~t~ea~~il~~~--GI~~~Pd~~aNaGGV~vS~~E~~qN~~~~~w~~e~V~~~l~~~m~ 382 (421)
T 2yfq_A 305 ITGERAKTINAKLVCEAANGPTTPEGDKVLTER--GINLTPDILTNSGGVLVSYYEWVQNQYGYYWTEAEVEEKQEADMM 382 (421)
T ss_dssp SCHHHHTTCCCSEEECCSSSCSCHHHHHHHHHH--TCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred CCcccHHHcCCeEEEeCCccccCHHHHHHHHHC--CCEEEChHHHhCCCeEEEEEEEEecCccCcCCHHHHHHHHHHHHH
Confidence 999999999999999999999866555555555 5888999 9999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCCChhhhhhhheee-c-ccCccccee
Q psy8846 491 RSARAIMKTAMKYNLGHLDINAHACVTGKP-I-NQGGIHGRI 530 (568)
Q Consensus 491 ~a~~~V~~~a~~~~~~~~dlR~AAyi~Ai~-i-~a~~~~G~~ 530 (568)
++|++++++|++++ +|+|+|||++|+. | ++|..+||+
T Consensus 383 ~~~~~v~~~A~~~g---~~~~~aA~~~a~~rv~~a~~~~G~~ 421 (421)
T 2yfq_A 383 KAIKGVFAVADEYN---VTLREAVYMYAIKSIDVAMKLRGWY 421 (421)
T ss_dssp HHHHHHHHHHHHTT---CCHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHC---cCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999998 7999999999999 7 999999985
No 9
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=100.00 E-value=3.4e-79 Score=653.12 Aligned_cols=334 Identities=31% Similarity=0.477 Sum_probs=310.7
Q ss_pred CCCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhhhhhhhcCCCCcEEEEEEeEEcCCCcEEEEeeEEEEecCC
Q psy8846 172 NPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHSTH 251 (568)
Q Consensus 172 ~~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I~~~I~~~~rv~~v~~pv~~d~G~~~~~~gyrv~h~~~ 251 (568)
++++|+++..++++++.+++. .+++++.|..|+|++.|++||.||+|++++|+|||+|||++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~P~r~i~~~~p~~~D~G~~~~~~g~rv~~~~~ 63 (415)
T 2tmg_A 2 EKSLYEMAVEQFNRAASLMDL------------------ESDLAEVLRRPKRVLIVEFPVRMDDGHVEVFTGYRVQHNVA 63 (415)
T ss_dssp --CHHHHHHHHHHHHHHHTTC------------------CHHHHHHHHSCSEEEEEEEEEECTTSCEEEEEEEEEEEECT
T ss_pred CCCHHHHHHHHHHHHHHHhCC------------------CHHHHHhcCCCCeEEEEEEEEEecCCcEEEEEEEEEEECCC
Confidence 467899999999999999994 47799999999999999999999999999999999999999
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHHhhHhhhhcCCCCCCceeEeeCCCCCCCHHHHHHHHHHHHHHHhhcCccccccCCC
Q psy8846 252 RTPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331 (568)
Q Consensus 252 ~GP~kGGiR~~p~v~~dev~aLA~~MT~K~Al~~lP~GGaKggI~~dP~~~s~~Eler~~r~f~~~L~~~~~iGp~~dip 331 (568)
+||+||||||||+++++||++||++|||||||+|||||||||||.+||+.+|+.|++|+||+|+++|.+ ++||+.|||
T Consensus 64 ~GpakGGiR~~p~v~~~ev~~La~~mt~KnAl~~lP~GG~KGgi~~dP~~~s~~e~~r~~r~f~~~l~~--~ig~~~dvp 141 (415)
T 2tmg_A 64 RGPAKGGIRYHPDVTLDEVKALAFWMTWKTAVMNLPFGGGKGGVRVDPKKLSRRELERLSRRFFREIQV--IIGPYNDIP 141 (415)
T ss_dssp TSSEECCEEEESSCCHHHHHHHHHHHHHHHHHHTCSCCEEEEEEECCGGGSCHHHHHHHHHHHHHHTGG--GCBTTTEEC
T ss_pred CCCCCCcEEeeCCCCHHHHHHHHHHHHHHHHhcCCCCCCcceEEeCCCCCCCHHHHHHHHHHHHHHHHH--HhCCCcEEe
Confidence 999999999999999999999999999999999999999999999999999999999999999999998 999999999
Q ss_pred CCc----ccccch---hhhcccCc------------------e---------------------------e-ec--cCHH
Q psy8846 332 GAR----AREGNV---TFNLLFHY------------------K---------------------------F-SS--GPVS 356 (568)
Q Consensus 332 apD----~~~maw---~y~~~~G~------------------R---------------------------~-~~--GnVG 356 (568)
||| +++|+| +|+++.|+ | + ++ ||||
T Consensus 142 a~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG 221 (415)
T 2tmg_A 142 APDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKVCAGLAMDVLGIDPKKATVAVQGFGNVG 221 (415)
T ss_dssp CBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCTTTCEEEEECCSHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHHHHHHHHHHcCCCcCCCEEEEECCcHHH
Confidence 999 899999 88654221 1 1 12 9999
Q ss_pred HHHHHHHHH-CCCeEeEeCCC--------CCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCCCChh
Q psy8846 357 MYLPQIWVQ-EKGKCPGLPTH--------TRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKN 427 (568)
Q Consensus 357 ~~~A~~L~~-~GakvvaVsD~--------GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~It~~ 427 (568)
+++|++|++ .|+|||+|||+ |||+++|.++++++|+|.+|++++.++++++|+.+||||+|||++|+||.+
T Consensus 222 ~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil~~~~DIliP~A~~n~i~~~ 301 (415)
T 2tmg_A 222 QFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELLELDVDILVPAALEGAIHAG 301 (415)
T ss_dssp HHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHTTCSCSEEEECSSTTSBCHH
T ss_pred HHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhhcCCCcEEEecCCcCccCcc
Confidence 999999999 99999999999 999999999999999999999999998889999999999999999999999
Q ss_pred hHhcccceEEEecCCcchHHHHHHHhccCCCcccccCc-------------HHHHhhccCCCcHHHHHHHHHHHHHHHHH
Q psy8846 428 NAHKIQAKIIAEAANESVQESLERRFGNVGGRIPVTPS-------------ESFQKRISGASEKDIVHSGLDYTMERSAR 494 (568)
Q Consensus 428 na~~i~AkiIvE~AN~~~~~~l~~~l~~~GggI~vvPd-------------e~~q~~~~~~we~e~V~~~L~~~M~~a~~ 494 (568)
||++|+||+|+||||+|+++...+.|.++ ||.|+|| ||+||.++.+|++|+|+++|+++|.++|+
T Consensus 302 ~a~~l~ak~V~EgAN~p~t~~a~~~l~~~--Gi~~~PD~~aNaGGV~~s~~E~vqN~~~~~w~~e~v~~~l~~~m~~~~~ 379 (415)
T 2tmg_A 302 NAERIKAKAVVEGANGPTTPEADEILSRR--GILVVPDILANAGGVTVSYFEWVQDLQSFFWDLDQVRNALEKMMKGAFN 379 (415)
T ss_dssp HHTTCCCSEEECCSSSCBCHHHHHHHHHT--TCEEECHHHHTCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cHHHcCCeEEEeCCCcccCHHHHHHHHHC--CCEEEChHHHhCCCceEEEEEEEecCccccCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999877777777776 5889999 99999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCChhhhhhhheee-c-ccCccccee
Q psy8846 495 AIMKTAMKYNLGHLDINAHACVTGKP-I-NQGGIHGRI 530 (568)
Q Consensus 495 ~V~~~a~~~~~~~~dlR~AAyi~Ai~-i-~a~~~~G~~ 530 (568)
+++++|++++ +|+|+|||++|+. | ++|..+||+
T Consensus 380 ~v~~~A~~~g---~~~~~aA~~~a~~rv~~a~~~~G~~ 414 (415)
T 2tmg_A 380 DVMKVKEKYN---VDMRTAAYILAIDRVAYATKKRGIY 414 (415)
T ss_dssp HHHHHHHHHT---CCHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHC---cCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999998 7999999999999 7 999999986
No 10
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=100.00 E-value=2.5e-79 Score=654.81 Aligned_cols=334 Identities=25% Similarity=0.370 Sum_probs=312.7
Q ss_pred CCCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhhhhhhhcCCCCcEEEEEEeEEcCCCcEEEEeeEEEEecCC
Q psy8846 172 NPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHSTH 251 (568)
Q Consensus 172 ~~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I~~~I~~~~rv~~v~~pv~~d~G~~~~~~gyrv~h~~~ 251 (568)
.++||+++..++++++..++. .+++++.|.+|+|++.|++||.||+|++++|+|||+|||++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~P~r~i~v~~p~~~D~G~~~~~~G~rv~~~~~ 64 (421)
T 1v9l_A 3 RTGFLEYVLNYVKKGVELGGF------------------PEDFYKILSRPRRVLIVNIPVRLDGGGFEVFEGYRVQHCDV 64 (421)
T ss_dssp -CHHHHHHHHHHHHHHHHTTC------------------CHHHHHHHHSCSEEEEEEEEEECSSSCEEEEEEEEEEEECS
T ss_pred CCCHHHHHHHHHHHHHHHhCC------------------CHHHHHhccCCceEEEEEEEEEecCCcEEEEEEEEeecCCc
Confidence 356899999999999999984 47899999999999999999999999999999999999999
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHHhhHhhhhcCCCCCCceeEeeCCCCCCCHHHHHHHHHHHHHHHhhcCccccccCCC
Q psy8846 252 RTPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331 (568)
Q Consensus 252 ~GP~kGGiR~~p~v~~dev~aLA~~MT~K~Al~~lP~GGaKggI~~dP~~~s~~Eler~~r~f~~~L~~~~~iGp~~dip 331 (568)
+||+||||||||+++++||++||++|||||||+|||||||||||.+||+.+|+.|++|+||+|+++|.+ ++||+.|||
T Consensus 65 ~GpakGG~R~~p~v~~~ev~~La~~mt~KnAl~~lP~GG~KGgi~~dP~~~s~~e~~r~~r~f~~~l~~--~iG~~~dvp 142 (421)
T 1v9l_A 65 LGPYKGGVRFHPEVTLADDVALAILMTLKNSLAGLPYGGAKGAVRVDPKKLSQRELEELSRGYARAIAP--LIGDVVDIP 142 (421)
T ss_dssp SSSEEEEEECCTTCCHHHHHHHHHHHHHHHHHTTCSCCEEEEEECSCGGGSCHHHHHHHHHHHHHHHGG--GCBTTTEEE
T ss_pred CCCccccEEecCCCCHHHHHHHHHHHHHHHHhhCCCCCCcceEEeCCCCCCCHHHHHHHHHHHHHHHHH--hcCCCeEEe
Confidence 999999999999999999999999999999999999999999999999999999999999999999998 999999999
Q ss_pred CCc----ccccch---hhhcccCc------------------e---------------------------e-ec--cCHH
Q psy8846 332 GAR----AREGNV---TFNLLFHY------------------K---------------------------F-SS--GPVS 356 (568)
Q Consensus 332 apD----~~~maw---~y~~~~G~------------------R---------------------------~-~~--GnVG 356 (568)
||| +++|+| +|+++.|+ | + ++ ||||
T Consensus 143 A~D~Gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~GnVG 222 (421)
T 1v9l_A 143 APDVGTNAQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVAVATREMAKKLWGGIEGKTVAIQGMGNVG 222 (421)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHHHHHHHHHHHHHSCCTTCEEEEECCSHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHHHHHHHHHHHhcCCCcCCCEEEEECcCHHH
Confidence 999 999999 88653221 1 1 12 9999
Q ss_pred HHHHHHHHHCCCeEeEeCCC--------CCCHHHHHHHHHhcCC--cccCCCC---eec-CCCCcccccceEEeeccccC
Q psy8846 357 MYLPQIWVQEKGKCPGLPTH--------TRKPLALEEYKLDNGT--IVGFPGA---VPY-EGENLMYEPCDIFVPAAVEK 422 (568)
Q Consensus 357 ~~~A~~L~~~GakvvaVsD~--------GiD~~~L~~~~~~~g~--v~~~~ga---~~i-~~~~ll~~~cDIliPaAl~~ 422 (568)
+++|++|++.|+|||+|||+ |||+++|.++++++|+ +.+|+++ +.+ +++++|+++||||+|||+++
T Consensus 223 ~~aa~~L~e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~~~~~~~~~~Dil~P~A~~~ 302 (421)
T 1v9l_A 223 RWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNPDAIFKLDVDIFVPAAIEN 302 (421)
T ss_dssp HHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSSTTGGGGCCCSEEEECSCSS
T ss_pred HHHHHHHHHCCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCCchhhhcCCccEEEecCcCC
Confidence 99999999999999999999 9999999999999999 9999887 888 88999999999999999999
Q ss_pred CCChhhHhcccceEEEecCCcchHHHHHHHhccCCCcccccCc-------------HHHHhhccCCCcHHHHHHHHHHHH
Q psy8846 423 VITKNNAHKIQAKIIAEAANESVQESLERRFGNVGGRIPVTPS-------------ESFQKRISGASEKDIVHSGLDYTM 489 (568)
Q Consensus 423 ~It~~na~~i~AkiIvE~AN~~~~~~l~~~l~~~GggI~vvPd-------------e~~q~~~~~~we~e~V~~~L~~~M 489 (568)
+||.+||++|+||+|+||||+|+++...+.|.++ ||.|+|| ||+||.++.+|++|+|+++|+++|
T Consensus 303 ~I~~~~a~~l~ak~V~EgAN~p~t~~a~~~l~~~--Gi~~~PD~~aNaGGV~~S~~E~~qn~~~~~w~~e~v~~~l~~im 380 (421)
T 1v9l_A 303 VIRGDNAGLVKARLVVEGANGPTTPEAERILYER--GVVVVPDILANAGGVIMSYLEWVENLQWYIWDEEETRKRLENIM 380 (421)
T ss_dssp CBCTTTTTTCCCSEEECCSSSCBCHHHHHHHHTT--TCEEECHHHHSTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred ccchhhHHHcCceEEEecCCCcCCHHHHHHHHHC--CCEEeChHHhhCCCeeeeHHHHHhhccccCCCHHHHHHHHHHHH
Confidence 9999999999999999999999987777777777 5889999 899999999999999999999999
Q ss_pred HHHHHHHHHHHH-hccCCCCChhhhhhhheee-c-ccCccccee
Q psy8846 490 ERSARAIMKTAM-KYNLGHLDINAHACVTGKP-I-NQGGIHGRI 530 (568)
Q Consensus 490 ~~a~~~V~~~a~-~~~~~~~dlR~AAyi~Ai~-i-~a~~~~G~~ 530 (568)
.++|++|+++|+ +++ +|+|+|||++|+. | ++|..+||+
T Consensus 381 ~~~~~~v~~~a~~~~~---~~~~~aA~~~a~~rv~~a~~~~G~~ 421 (421)
T 1v9l_A 381 VNNVERVYKRWQREKG---WTMRDAAIVTALERIYNAMKIRGWI 421 (421)
T ss_dssp HHHHHHHHHHHTTSSS---CCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999 887 7999999999999 7 999999985
No 11
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=100.00 E-value=9.4e-78 Score=646.20 Aligned_cols=343 Identities=25% Similarity=0.312 Sum_probs=314.1
Q ss_pred CCCCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhhhhhhhcCCCCcEEEEEEeEEcCCCcEEEEeeEEEEecC
Q psy8846 171 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHST 250 (568)
Q Consensus 171 ~~~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I~~~I~~~~rv~~v~~pv~~d~G~~~~~~gyrv~h~~ 250 (568)
.+++|++++..++++++.+++.. |+.. ..++++.|.+|+|++.|++||.+|+|++++|+|||||||+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~~---~~~~~~~l~~Per~i~~~vp~~~d~G~~~v~~G~rv~hn~ 83 (449)
T 1bgv_A 17 DEPEFVQTVEEVLSSLGPVVDAH----------PEYE---EVALLERMVIPERVIEFRVPWEDDNGKVHVNTGYRVQFNG 83 (449)
T ss_dssp TCHHHHHHHHHHHHTTHHHHHTC----------HHHH---HTTHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEEC
T ss_pred CCccHHHHHHHHHHHHHHHhccC----------hhhh---hhhHHHHhcCCceEEEEEEEEEeCCCCEEEEeEEEEEEcC
Confidence 68899999999999999999842 2211 2469999999999999999999999999999999999999
Q ss_pred CCCCCCCCeeeeCCCCHHHHHHHHHHhhHhhhhcCCCCCCceeEeeCCCCCCCHHHHHHHHHHHHHHHhhcCccccccCC
Q psy8846 251 HRTPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAV 330 (568)
Q Consensus 251 ~~GP~kGGiR~~p~v~~dev~aLA~~MT~K~Al~~lP~GGaKggI~~dP~~~s~~Eler~~r~f~~~L~~~~~iGp~~di 330 (568)
++||+||||||||+++++||++||++|||||||+|||||||||||.+||+.+|+.|++|++|+|+++|.+ +|||+.||
T Consensus 84 ~~GPakGGlR~~p~v~~~ev~~La~~mt~KnAl~~lP~GGgKGGi~~dP~~~s~~e~~r~~r~f~~~L~~--~ig~~~dv 161 (449)
T 1bgv_A 84 AIGPYKGGLRFAPSVNLSIMKFLGFEQAFKDSLTTLPMGGAKGGSDFDPNGKSDREVMRFCQAFMTELYR--HIGPDIDV 161 (449)
T ss_dssp SSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHHTSSSCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGG--GCBTTTEE
T ss_pred CcCCCCCCeeecCCCCHHHHHHHHHHHHHHHHhhCCCCCCccEEEECCCccCCHHHHHHHHHHHHHHhhh--eeCCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999987 89999999
Q ss_pred CCCc----ccccch---hhhcccCc------------------e---------------------------e-ec--cCH
Q psy8846 331 PGAR----AREGNV---TFNLLFHY------------------K---------------------------F-SS--GPV 355 (568)
Q Consensus 331 papD----~~~maw---~y~~~~G~------------------R---------------------------~-~~--GnV 355 (568)
|||| +++|+| +|+++.|+ | + +| |||
T Consensus 162 pA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~G~~l~g~~v~VqG~GnV 241 (449)
T 1bgv_A 162 PAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVYYVEAVMKHENDTLVGKTVALAGFGNV 241 (449)
T ss_dssp EECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCSTTCEEEECCSSHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHHHHHHHHHHccCCcCCCEEEEECCCHH
Confidence 9999 899999 88764321 1 1 22 999
Q ss_pred HHHHHHHHHHCCCeEeEeCCC--------CC----CHHHHHHHHHhc-CCcccCCC---CeecCCCCcccccceEEeecc
Q psy8846 356 SMYLPQIWVQEKGKCPGLPTH--------TR----KPLALEEYKLDN-GTIVGFPG---AVPYEGENLMYEPCDIFVPAA 419 (568)
Q Consensus 356 G~~~A~~L~~~GakvvaVsD~--------Gi----D~~~L~~~~~~~-g~v~~~~g---a~~i~~~~ll~~~cDIliPaA 419 (568)
|+++|++|++.|+|||+|||+ || |+++|.++++++ |++.+|++ ++.++++++|+++||||+|||
T Consensus 242 G~~~a~~L~~~GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~~a~~i~~~e~~~~~~Dil~P~A 321 (449)
T 1bgv_A 242 AWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQFFPGEKPWGQKVDIIMPCA 321 (449)
T ss_dssp HHHHHHHHHHHTCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEEEETCCGGGSCCSEEECCS
T ss_pred HHHHHHHHHHCCCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhcccccCCEEeCchhhhcCCcceeeccc
Confidence 999999999999999999998 99 778899999887 79999875 899998899999999999999
Q ss_pred ccCCCChhhHhcccc---eEEEecCCcchHHHHHHHhccCCCcccccCc-------------HHHHhhccCCCcHHHHHH
Q psy8846 420 VEKVITKNNAHKIQA---KIIAEAANESVQESLERRFGNVGGRIPVTPS-------------ESFQKRISGASEKDIVHS 483 (568)
Q Consensus 420 l~~~It~~na~~i~A---kiIvE~AN~~~~~~l~~~l~~~GggI~vvPd-------------e~~q~~~~~~we~e~V~~ 483 (568)
++++||.+||++|+| |+|+||||+|+++...+.|.+++ ||.|+|| ||.||.+...|++|+|++
T Consensus 322 ~~~~I~~~na~~l~a~g~kiV~EgAN~p~T~eA~~~l~~~~-Gi~~~PD~~aNaGGV~~S~~E~~qn~~~~~w~~eev~~ 400 (449)
T 1bgv_A 322 TQNDVDLEQAKKIVANNVKYYIEVANMPTTNEALRFLMQQP-NMVVAPSKAVNAGGVLVSGFEMSQNSERLSWTAEEVDS 400 (449)
T ss_dssp CTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHHHHHHHCT-TCEEECHHHHTTHHHHHHHHHHHHHHHTSCCCHHHHHH
T ss_pred cccccchhhHHHHHhcCCeEEEeCCCCcCCHHHHHHHHHcC-CEEEEChHHhcCCCceeehhhhhcccccccccHHHHHH
Confidence 999999999999997 99999999999888888888883 2889999 888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCChhhhhhhheee-c-ccCccccee
Q psy8846 484 GLDYTMERSARAIMKTAMKYNLGHLDINAHACVTGKP-I-NQGGIHGRI 530 (568)
Q Consensus 484 ~L~~~M~~a~~~V~~~a~~~~~~~~dlR~AAyi~Ai~-i-~a~~~~G~~ 530 (568)
+|+.+|.++|+.|++++++|+.+ .|+|+|||+.|+. | ++|..+|++
T Consensus 401 ~L~~~m~~~~~~v~~~a~~~~~~-~~~~~~A~i~~~~rv~~a~~~~G~~ 448 (449)
T 1bgv_A 401 KLHQVMTDIHDGSAAAAERYGLG-YNLVAGANIVGFQKIADAMMAQGIA 448 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC-SCHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC-CCHHHHhhHHHHHHHHHHHHhcCcc
Confidence 99999999999999999999843 3999999999999 7 999999986
No 12
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=100.00 E-value=2.5e-69 Score=579.12 Aligned_cols=334 Identities=28% Similarity=0.410 Sum_probs=305.2
Q ss_pred CCCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhhhhhhhcCCCCcEEEEEEeEEcCCCcEEEEeeEEEEecCC
Q psy8846 172 NPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHSTH 251 (568)
Q Consensus 172 ~~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I~~~I~~~~rv~~v~~pv~~d~G~~~~~~gyrv~h~~~ 251 (568)
++++|+++..++++++..++. .+++++.|.+|++++.|++||.||+|++++|+|||+|||++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~p~r~~~~~~p~~~d~G~~~~~~g~rv~~~~~ 63 (419)
T 1gtm_A 2 EADPYEIVIKQLERAAQYMEI------------------SEEALEFLKRPQRIVEVTIPVEMDDGSVKVFTGFRVQHNWA 63 (419)
T ss_dssp -CTHHHHHHHHHHHHGGGSCC------------------CHHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEECT
T ss_pred CccHHHHHHHHHHHHHHHhCC------------------ChhhhhcCCCCceEEEEEEEEEecCCCEEEEEEEEEEECCC
Confidence 567999999999999999984 47899999999999999999999999999999999999999
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHHhhHhhhhcCCCCCCceeEeeCCCCCCCHHHHHHHHHHHHHHHhhcCccccccCCC
Q psy8846 252 RTPCKGGIRFSDDVSRDEVKALSALMTFKCACVDVPFGGAKAGIKINPKNYSENELEKITRRFTLELAKKGFIGEFKAVP 331 (568)
Q Consensus 252 ~GP~kGGiR~~p~v~~dev~aLA~~MT~K~Al~~lP~GGaKggI~~dP~~~s~~Eler~~r~f~~~L~~~~~iGp~~dip 331 (568)
+||+||||||||+++++||++||++|||||||+|||||||||||.+||+.+|+.|++|+||+|+++|.+ ++||+.|||
T Consensus 64 ~Gp~kGG~R~~~~~~~~ev~~La~~mt~Knal~~lp~GG~Kggi~~dP~~~s~~e~~~~~r~f~~~l~~--~~g~~~dv~ 141 (419)
T 1gtm_A 64 RGPTKGGIRWHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAIYD--VISPYEDIP 141 (419)
T ss_dssp TSSEECCEEECTTCCHHHHHHHHHHHHHHHHHTTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGG--GCBTTTEEC
T ss_pred CCCCcCCEEeeCCCCHHHHHHHHHHHHHHHHhcCCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHHH--hcCCCcEEe
Confidence 999999999999999999999999999999999999999999999999999999999999999999998 999999999
Q ss_pred CCc----ccccch---hhhccc-----------Cc---------e---------------------e-e-------c--c
Q psy8846 332 GAR----AREGNV---TFNLLF-----------HY---------K---------------------F-S-------S--G 353 (568)
Q Consensus 332 apD----~~~maw---~y~~~~-----------G~---------R---------------------~-~-------~--G 353 (568)
||| +++|+| +|+++. |. | - + + |
T Consensus 142 a~D~gt~~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G~~~l~gktvgI~G~G 221 (419)
T 1gtm_A 142 APDVYTNPQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARGASYTIREAAKVLGWDTLKGKTIAIQGYG 221 (419)
T ss_dssp CBCTTCCHHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCSCSTTCEEEEECCS
T ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhhHHHHHHHHHHHHhCCcccCCCEEEEEcCC
Confidence 999 899999 775431 11 1 0 1 1 9
Q ss_pred CHHHHHHHHHHH-CCCeEeEeCCC--------CCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCCC
Q psy8846 354 PVSMYLPQIWVQ-EKGKCPGLPTH--------TRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVI 424 (568)
Q Consensus 354 nVG~~~A~~L~~-~GakvvaVsD~--------GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~I 424 (568)
|||+++|+.|++ .|++|+++||+ |+|.++|.++.+..++|..||..+.++.++++..+||||||||.+++|
T Consensus 222 ~VG~~vA~~l~~~~G~kVv~~sD~~g~~~~~~gvdl~~L~~~~d~~~~l~~l~~t~~i~~~~l~~mk~dilIn~ArG~~V 301 (419)
T 1gtm_A 222 NAGYYLAKIMSEDFGMKVVAVSDSKGGIYNPDGLNADEVLKWKNEHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVI 301 (419)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECSSCEEEEEEEECHHHHHHHHHHHSSSTTCTTSEEECHHHHHHSCCSEEEECSCSCCB
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCCccccCccCCCHHHHHHHHHhcCEeecCccCeeeCHHHHHhCCCCEEEECCCcccC
Confidence 999999999999 99999999998 789999999999888999999888888889999999999999999999
Q ss_pred ChhhHhcccceEEEecCCcchHHHHHHHhccCCCcccccCc-------------HHHHhhccCCCcHHHHHHHHHHHHHH
Q psy8846 425 TKNNAHKIQAKIIAEAANESVQESLERRFGNVGGRIPVTPS-------------ESFQKRISGASEKDIVHSGLDYTMER 491 (568)
Q Consensus 425 t~~na~~i~AkiIvE~AN~~~~~~l~~~l~~~GggI~vvPd-------------e~~q~~~~~~we~e~V~~~L~~~M~~ 491 (568)
++++++.|+|+.|+||||.|+++.....|... +|.++|+ ||+||.++.+|+.++|.++|+++|.+
T Consensus 302 de~a~~aL~~~~I~~aAneP~t~~a~~ll~~~--~V~itPhiaaNaGGvt~s~~E~~qn~~~~~w~~~ev~~~l~~~m~~ 379 (419)
T 1gtm_A 302 TKKNADNIKAKIVAEVANGPVTPEADEILFEK--GILQIPDFLCNAGGVTVSYFEWVQNITGYYWTIEEVRERLDKKMTK 379 (419)
T ss_dssp CTTGGGGCCCSEEECCSSSCBCHHHHHHHHHT--TCEEECHHHHTTHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHhcCCEEEEeeCCCCCcchHHHHhcC--CEEEECchhhhCCcceeeeehhhhcccccccCHHHHHHHHHHHHHH
Confidence 99999999999999999999643222222222 5778888 89999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCCChhhhhhhheee-c-ccCccccee
Q psy8846 492 SARAIMKTAMKYNLGHLDINAHACVTGKP-I-NQGGIHGRI 530 (568)
Q Consensus 492 a~~~V~~~a~~~~~~~~dlR~AAyi~Ai~-i-~a~~~~G~~ 530 (568)
++.+++++|++++ +|+|+|||++|+. | ++|..+||+
T Consensus 380 ~~~~~~~~a~~~~---~~~~~aA~~~a~~rv~~a~~~~g~~ 417 (419)
T 1gtm_A 380 AFYDVYNIAKEKN---IHMRDAAYVVAVQRVYQAMLDRGWV 417 (419)
T ss_dssp HHHHHHHHHHHTT---CCHHHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHC---cCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999998 7999999999999 7 999999987
No 13
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=100.00 E-value=1.8e-55 Score=462.47 Aligned_cols=266 Identities=18% Similarity=0.235 Sum_probs=228.4
Q ss_pred EEeeEEEEecCCCCCCCCCeeeeCCCCHH----HHHHHHHHhhHhhhhcCCCCCCceeEeeC-CCCC-CCHHHHHHHHHH
Q psy8846 240 IITGYRAQHSTHRTPCKGGIRFSDDVSRD----EVKALSALMTFKCACVDVPFGGAKAGIKI-NPKN-YSENELEKITRR 313 (568)
Q Consensus 240 ~~~gyrv~h~~~~GP~kGGiR~~p~v~~d----ev~aLA~~MT~K~Al~~lP~GGaKggI~~-dP~~-~s~~Eler~~r~ 313 (568)
.++|||||||+++||+||||||||++|.+ |+++||++|||||||+|||||||||||.+ ||+. +|..|+++++|+
T Consensus 22 ~~~~~~~~h~~~~GP~kGG~R~~p~v~~~~~~~ev~~La~~mt~K~al~~lp~GG~Kggi~~~dP~~~~s~~~~e~~~r~ 101 (355)
T 1c1d_A 22 GAHFVIRLDSTQLGPAAGGTRAAQYSNLADALTDAGKLAGAMTLKMAVSNLPMGGGKSVIALPAPRHSIDPSTWARILRI 101 (355)
T ss_dssp TEEEEEEEEECSSSSEEEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEEEECSSCGGGCCHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCCCCCcEEecCCCChHHHHHHHHHHHHHHHHHHHhhCCCCCCceeeEeccCcccccChhhHHHHHHH
Confidence 37999999999999999999999999876 89999999999999999999999999999 9999 999999999999
Q ss_pred HHHHHhhcCccccccCCCCCc----ccccch---hhhcccCc---------e----------------------------
Q psy8846 314 FTLELAKKGFIGEFKAVPGAR----AREGNV---TFNLLFHY---------K---------------------------- 349 (568)
Q Consensus 314 f~~~L~~~~~iGp~~dipapD----~~~maw---~y~~~~G~---------R---------------------------- 349 (568)
|.+.+.. ++|+ |||+|| +++|+| +|+.+.|. |
T Consensus 102 ~~~~~~~--l~g~--~ipa~D~gt~~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G~~~L~Gkt 177 (355)
T 1c1d_A 102 HAENIDK--LSGN--YWTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHRGLGSLDGLT 177 (355)
T ss_dssp HHHHHHH--TTTS--EEEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHTTCCCSTTCE
T ss_pred HHHHHHH--hcCC--cccCCCCCCCHHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhcCCCCCCCCE
Confidence 9998887 6675 889999 899999 77655432 1
Q ss_pred e-ec--cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCCCCh
Q psy8846 350 F-SS--GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITK 426 (568)
Q Consensus 350 ~-~~--GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~It~ 426 (568)
+ ++ ||||+++|++|++.|+||| ++|. |.++ .++.++. +++.++.+++|..+||||+|||++++||+
T Consensus 178 V~I~G~GnVG~~~A~~l~~~GakVv-vsD~--~~~~-~~~a~~~-------ga~~v~~~ell~~~~DIliP~A~~~~I~~ 246 (355)
T 1c1d_A 178 VLVQGLGAVGGSLASLAAEAGAQLL-VADT--DTER-VAHAVAL-------GHTAVALEDVLSTPCDVFAPCAMGGVITT 246 (355)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEE-EECS--CHHH-HHHHHHT-------TCEECCGGGGGGCCCSEEEECSCSCCBCH
T ss_pred EEEECcCHHHHHHHHHHHHCCCEEE-EEeC--CccH-HHHHHhc-------CCEEeChHHhhcCccceecHhHHHhhcCH
Confidence 0 11 9999999999999999999 7765 6655 4455443 67888888999999999999999999999
Q ss_pred hhHhcccceEEEecCCcchH-HHHHHHhccCCCcccccCcHHHHhh----c----cCCCcHHHHHHHHHHHHHHHHHHHH
Q psy8846 427 NNAHKIQAKIIAEAANESVQ-ESLERRFGNVGGRIPVTPSESFQKR----I----SGASEKDIVHSGLDYTMERSARAIM 497 (568)
Q Consensus 427 ~na~~i~AkiIvE~AN~~~~-~~l~~~l~~~GggI~vvPde~~q~~----~----~~~we~e~V~~~L~~~M~~a~~~V~ 497 (568)
+|++.++|++|+|+||+|++ +...+.|.+. ||.++||...+.. . ...|++|+|+++|+.+| ++|++|+
T Consensus 247 ~~~~~lk~~iVie~AN~p~t~~eA~~~L~~~--gIlv~Pd~~aNaGGV~~s~~~E~~~w~~e~v~~~l~~i~-~~~~~i~ 323 (355)
T 1c1d_A 247 EVARTLDCSVVAGAANNVIADEAASDILHAR--GILYAPDFVANAGGAIHLVGREVLGWSESVVHERAVAIG-DTLNQVF 323 (355)
T ss_dssp HHHHHCCCSEECCSCTTCBCSHHHHHHHHHT--TCEECCHHHHTTHHHHHHHHHHTTCCCHHHHHHHHHTHH-HHHHHHH
T ss_pred HHHhhCCCCEEEECCCCCCCCHHHHHHHHhC--CEEEECCeEEcCCCeeeeeeehhcCCCHHHHHHHHHHHH-HHHHHHH
Confidence 99999999999999999974 3455556655 5899999655431 1 15799999999999999 8899999
Q ss_pred HHHHhccCCCCChhhhhhhheee-c-ccCcc
Q psy8846 498 KTAMKYNLGHLDINAHACVTGKP-I-NQGGI 526 (568)
Q Consensus 498 ~~a~~~~~~~~dlR~AAyi~Ai~-i-~a~~~ 526 (568)
+.+++++ +++|+|||++|+. | +++..
T Consensus 324 ~~~~~~~---~~~~~aA~~~a~~rv~~a~~~ 351 (355)
T 1c1d_A 324 EISDNDG---VTPDEAARTLAGRRAREASTT 351 (355)
T ss_dssp HHHHHHT---CCHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHhC---cCHHHHHHHHHHHHHHHHHhh
Confidence 9999998 8999999999999 7 77743
No 14
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=100.00 E-value=1.8e-54 Score=456.70 Aligned_cols=274 Identities=18% Similarity=0.217 Sum_probs=230.1
Q ss_pred EeeEEEEecCCCCCCCCCeeeeCCCCHH----HHHHHHHHhhHhhhhcCCCCCCceeEeeCCCCCCCHHHHHHHHHHHHH
Q psy8846 241 ITGYRAQHSTHRTPCKGGIRFSDDVSRD----EVKALSALMTFKCACVDVPFGGAKAGIKINPKNYSENELEKITRRFTL 316 (568)
Q Consensus 241 ~~gyrv~h~~~~GP~kGGiR~~p~v~~d----ev~aLA~~MT~K~Al~~lP~GGaKggI~~dP~~~s~~Eler~~r~f~~ 316 (568)
++|||||||+++||+||||||||++|.+ |+++||+||||||||+|||||||||||.+||+.++.+++.|.+.+|+.
T Consensus 25 ~~~~~~~h~~~~Gp~kGG~R~~p~v~~~~~~~e~~~La~~mt~K~al~~lp~GG~Kggi~~dP~~~~~~~~~r~~~~~~~ 104 (364)
T 1leh_A 25 LKAVIAIHDTTLGPALGGARMWTYNAEEEAIEDALRLARGMTYKNAAAGLNLGGGKTVIIGDPFADKNEDMFRALGRFIQ 104 (364)
T ss_dssp EEEEEEEEECSSSSEECCEEEECCSCHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEEEESCTTTTCCHHHHHHHHHHHH
T ss_pred eEEEEEEECCCCCCCCCcEEecCCCChHHHHHHHHHHHHHHHHHHHhcCCCCcCcceEEeCCCCCCCHHHHHHHHHHHHH
Confidence 7999999999999999999999999876 899999999999999999999999999999999876665555555555
Q ss_pred HHhhcCccccccCCCCCc----ccccch---hhhcccCc---------e-------------------e-----------
Q psy8846 317 ELAKKGFIGEFKAVPGAR----AREGNV---TFNLLFHY---------K-------------------F----------- 350 (568)
Q Consensus 317 ~L~~~~~iGp~~dipapD----~~~maw---~y~~~~G~---------R-------------------~----------- 350 (568)
+| +|+ |||||| +++|+| +|+...|. | |
T Consensus 105 ~l-----~g~--~i~A~D~Gt~~~~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~~~L~GktV~ 177 (364)
T 1leh_A 105 GL-----NGR--YITAEDVGTTVDDMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGSDSLEGLAVS 177 (364)
T ss_dssp TT-----TTS--EEBCBCTTCCHHHHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSSCCCTTCEEE
T ss_pred Hh-----cCc--eEEcccCCCCHHHHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhccccCCCcCEEE
Confidence 44 454 779999 899999 66433332 0 1
Q ss_pred ec--cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCCCChhh
Q psy8846 351 SS--GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNN 428 (568)
Q Consensus 351 ~~--GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~It~~n 428 (568)
++ ||||+++|++|++.|++|+ |+| +|.+++.++.++. +++.++.+++|..+|||++|||++++||.+|
T Consensus 178 V~G~G~VG~~~A~~L~~~GakVv-v~D--~~~~~l~~~a~~~-------ga~~v~~~~ll~~~~DIvip~a~~~~I~~~~ 247 (364)
T 1leh_A 178 VQGLGNVAKALCKKLNTEGAKLV-VTD--VNKAAVSAAVAEE-------GADAVAPNAIYGVTCDIFAPCALGAVLNDFT 247 (364)
T ss_dssp EECCSHHHHHHHHHHHHTTCEEE-EEC--SCHHHHHHHHHHH-------CCEECCGGGTTTCCCSEEEECSCSCCBSTTH
T ss_pred EECchHHHHHHHHHHHHCCCEEE-EEc--CCHHHHHHHHHHc-------CCEEEChHHHhccCCcEeeccchHHHhCHHH
Confidence 11 9999999999999999998 665 6888888888774 4677777889999999999999999999999
Q ss_pred HhcccceEEEecCCcchH-HHHHHHhccCCCcccccCcHHHHhh-------ccCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q psy8846 429 AHKIQAKIIAEAANESVQ-ESLERRFGNVGGRIPVTPSESFQKR-------ISGASEKDIVHSGLDYTMERSARAIMKTA 500 (568)
Q Consensus 429 a~~i~AkiIvE~AN~~~~-~~l~~~l~~~GggI~vvPde~~q~~-------~~~~we~e~V~~~L~~~M~~a~~~V~~~a 500 (568)
++.++|++|+|+||+|.+ +.+.+.|.++ ||.++||...+.. -...|++|+|+++|+.+| ++|++|++.+
T Consensus 248 ~~~lg~~iV~e~An~p~t~~ea~~~L~~~--Gi~~~Pd~~~NaGGv~~s~~E~~~~~~e~v~~~l~~i~-~~~~~i~~~~ 324 (364)
T 1leh_A 248 IPQLKAKVIAGSADNQLKDPRHGKYLHEL--GIVYAPDYVINAGGVINVADELYGYNRTRAMKRVDGIY-DSIEKIFAIS 324 (364)
T ss_dssp HHHCCCSEECCSCSCCBSSHHHHHHHHHH--TCEECCHHHHTTHHHHHHHHGGGCCCHHHHHHHHTHHH-HHHHHHHHHH
T ss_pred HHhCCCcEEEeCCCCCcccHHHHHHHHhC--CCEEecceeecCCceEEEEEeecCCCHHHHHHHHHHHH-HHHHHHHHHH
Confidence 999999999999999964 2455555554 6899999555431 125799999999999998 8899999999
Q ss_pred HhccCCCCChhhhhhhheee-c-ccCcccceeecCCCch
Q psy8846 501 MKYNLGHLDINAHACVTGKP-I-NQGGIHGRISATGRGV 537 (568)
Q Consensus 501 ~~~~~~~~dlR~AAyi~Ai~-i-~a~~~~G~~~atg~gv 537 (568)
++++ +++|+|||++|+. | +++..|||+-..+..+
T Consensus 325 ~~~~---~~~~~aA~~~a~~ri~~a~~~~~~~~~~~~~~ 360 (364)
T 1leh_A 325 KRDG---VPSYVAADRMAEERIAKVAKARSQFLQDQRNI 360 (364)
T ss_dssp HHTT---CCHHHHHHHHHHHHHHHHHHTTCSCCTTCCCT
T ss_pred HHhC---cCHHHHHHHHHHHHHHHHHHhCCcccCCcccc
Confidence 9998 7999999999999 7 8999999996655543
No 15
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=100.00 E-value=4.9e-37 Score=332.01 Aligned_cols=157 Identities=36% Similarity=0.567 Sum_probs=150.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhhhhchHHHhhhhhhhhhhhhHHhhhccCCCcCeEEEEEEeEEecCCceEEEeeeeee
Q psy8846 57 PTAENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQ 136 (568)
Q Consensus 57 ~~~~~p~f~~~v~~~~~~aa~~l~~~l~~~~~~~~~~~~~~~~v~~iL~~i~~p~rvl~vsfPvr~DdG~~ev~~GYRvQ 136 (568)
++++||+||+||++|||+|+++++++|+++++.+++.|||++++.++|++|++|+|+|+|+|||+||||++++|+|||||
T Consensus 2 ~~~~~~~f~~~v~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~p~r~i~~~vp~~~D~G~~~v~~GyRvq 81 (501)
T 3mw9_A 2 DREDDPNFFKMVEGFFDRGASIVEDKLVEDLKTRETEEQKRNRVRSILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQ 81 (501)
T ss_dssp CSTTCCCHHHHHHHHHHHHHHHHHHHHHHHCCCTTCSSHHHHHHHHHHHHHSSCSEEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCChhhhhhhhHHHHHHHhCCCeEEEEEEEEEeCCCCEEEeeeEEEE
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCceeccccCCccc--ch--hhhccCCCCCCCCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhh
Q psy8846 137 HSTHRTPCKGATAVQSQQRNLHD--IP--EKLKDIPTAENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVR 212 (568)
Q Consensus 137 Hs~~rgP~KGGIR~~~~~~~~~~--l~--~t~k~~~T~~~~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~ 212 (568)
||++|||+||||||||.|+++|+ |+ |||||++ .++| +++.||+..+||+ ++|.+|+++++|+|+.
T Consensus 82 hn~a~GP~kGGiR~hp~v~l~ev~~La~~MT~KnAl--~~LP------~GGgKGgi~~DPk---~~s~~El~r~~r~f~~ 150 (501)
T 3mw9_A 82 HSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAV--VDVP------FGGAKAGVKINPK---NYTDNELEKITRRFTM 150 (501)
T ss_dssp CCCSSSSEECCEEECTTCCHHHHHHHHHHHHHHHHH--TTCC------CEEEEEEECSCGG---GSCHHHHHHHHHHHHH
T ss_pred ECCCcCCCCCCeeecCCCCHHHHHHHHHHHHHHHHh--cCCC------CCCcceEEecCCc---cCCHHHHHHHHHHHHH
Confidence 99999999999999999999999 55 9999999 6888 8999999999998 8999999999999999
Q ss_pred hhhh--hcCCCCcE
Q psy8846 213 GILL--GMQPCDHI 224 (568)
Q Consensus 213 ~I~~--~I~~~~rv 224 (568)
+|.+ +|+|..++
T Consensus 151 eL~~~~~IGp~~di 164 (501)
T 3mw9_A 151 ELAKKGFIGPGVDV 164 (501)
T ss_dssp HHHHTTSCBTTTEE
T ss_pred HHhhccCCCCCeeE
Confidence 9995 99998876
No 16
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=99.96 E-value=2.4e-30 Score=277.85 Aligned_cols=150 Identities=14% Similarity=0.156 Sum_probs=132.1
Q ss_pred cccccCCccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhchHHHhhhhhhhhhhhhHHhhhccCCCcCeEEEEEEeEEec
Q psy8846 44 RNLHDIPEKLKDIPTAENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRD 123 (568)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~p~f~~~v~~~~~~aa~~l~~~l~~~~~~~~~~~~~~~~v~~iL~~i~~p~rvl~vsfPvr~D 123 (568)
...|++|++|++++++ |+||++++.+|++++.+++ +.+ ++|+.|++|+|+++|+|||+||
T Consensus 13 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~----------------~~~~~l~~P~r~i~~~~p~~~D 72 (440)
T 3aog_A 13 DPNSMKSEPLSYLGKD--GGPWEIFTEQVDRVVPYLG--RLA----------------PLAESLKRPKRVLIVDVPVRLD 72 (440)
T ss_dssp -------CCCGGGTTC--CTHHHHHHHHHHHHGGGCG--GGG----------------GGGGGGGSCSEEEEEEEEEECT
T ss_pred CcccccchhhhccCCC--CCHHHHHHHHHHHHHHHhC--CCH----------------HHHHHhcCCCeEEEEEEEEEec
Confidence 4468899999999888 9999999999999999988 221 2566679999999999999999
Q ss_pred CCceEEEeeeeeeecCCCCCCCCCceeccccCCccc--ch--hhhccCCCCCCCCHHHHHHHHHhhhhhhccccchhhhh
Q psy8846 124 SGDYEIITGYRAQHSTHRTPCKGATAVQSQQRNLHD--IP--EKLKDIPTAENPKFFDMVEFFFHRACQIAEDKLVEDIK 199 (568)
Q Consensus 124 dG~~ev~~GYRvQHs~~rgP~KGGIR~~~~~~~~~~--l~--~t~k~~~T~~~~~~~~~~~~~~~kAa~ildpk~~~~l~ 199 (568)
||++++|+|||||||+++||+||||||||.++++|+ |+ |||||++ .++| +++.||+..+||+ .+|
T Consensus 73 ~G~~~~~~G~rvqhn~a~GPakGGiR~~p~v~~~ev~~La~~mt~KnAl--~~lP------~GGgKGgi~~dP~---~~s 141 (440)
T 3aog_A 73 DGSVAYFEGYRVHHNTARGPAKGGVRYHPEVTLSEVMALAGWMTIKNAA--VGLP------YGGGKGGIRVDPR---KLS 141 (440)
T ss_dssp TSCEEEEEEEEEEEECTTSSEECCEEECTTCCHHHHHHHHHHHHHHHHH--HTCS------CCEEEEEEECCGG---GSC
T ss_pred CCCEEEEEEEEEEECCCCCCCcCCeEEEecCCHHHHHHHHHHHHHHHHh--cCCC------CCCcceEEecCCC---CCC
Confidence 999999999999999999999999999999999999 55 9999999 6888 8999999999998 889
Q ss_pred hccchhhhhhhhhhhhhhcCCCCcE
Q psy8846 200 GRMTIEDKKKKVRGILLGMQPCDHI 224 (568)
Q Consensus 200 ~~~~~~~~r~~~~~I~~~I~~~~rv 224 (568)
.+|++++.|+|..+|.++|+|..++
T Consensus 142 ~~Eler~~r~f~~~l~~~iGp~~dv 166 (440)
T 3aog_A 142 PGELERLTRRYTSEIGILLGPDRDI 166 (440)
T ss_dssp HHHHHHHHHHHHHHHGGGCBTTTEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 9999999999999999999988765
No 17
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=99.95 E-value=2.5e-29 Score=268.71 Aligned_cols=136 Identities=20% Similarity=0.229 Sum_probs=124.5
Q ss_pred CCCCHHHHHHHHHHHHHHHhhhhchHHHhhhhhhhhhhhhHHhhhccCCCcCeEEEEEEeEEecCCceEEEeeeeeeecC
Q psy8846 60 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHST 139 (568)
Q Consensus 60 ~~p~f~~~v~~~~~~aa~~l~~~l~~~~~~~~~~~~~~~~v~~iL~~i~~p~rvl~vsfPvr~DdG~~ev~~GYRvQHs~ 139 (568)
+.+++|++++.+|++|+++++ |.+. +|+.|++|+|+++|+|||+||||++++|+|||||||+
T Consensus 13 ~~~~~~~~~~~~~~~a~~~~~--~~~~----------------~~~~l~~p~r~~~~~vp~~~d~G~~~v~~GyRvqhn~ 74 (424)
T 3k92_A 13 EALNLFLSTQTIIKEALRKLG--YPGD----------------MYELMKEPQRMLTVRIPVKMDNGSVKVFTGYRSQHND 74 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT--CCHH----------------HHHHHSSCSEEEEEEEEEECTTSCEEEEEEEEEECCC
T ss_pred ccCCHHHHHHHHHHHHHHHcC--CCHH----------------HHHHhcCCCeEEEEEEEEEecCCcEEEEEEEEEEECC
Confidence 456899999999999999998 5443 3344499999999999999999999999999999999
Q ss_pred CCCCCCCCceeccccCCccc--ch--hhhccCCCCCCCCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhhhhh
Q psy8846 140 HRTPCKGATAVQSQQRNLHD--IP--EKLKDIPTAENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGIL 215 (568)
Q Consensus 140 ~rgP~KGGIR~~~~~~~~~~--l~--~t~k~~~T~~~~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I~ 215 (568)
++||+||||||||.++.+|+ |+ |||||++ .++| +++.||+..+||+ ++|.+|++++.|+|..+|.
T Consensus 75 a~GP~kGGiR~~p~v~~~ev~~La~~mt~KnAl--~~lP------~GGgKggi~~DP~---~~s~~El~r~~r~f~~~l~ 143 (424)
T 3k92_A 75 AVGPTKGGVRFHPEVNEEKVKALSIWMTLKCGI--ANLP------YGGGKGGIICDPR---TMSFGELERLSRGYVRAIS 143 (424)
T ss_dssp SSSSEECCEEEETTCCHHHHHHHHHHHHHHHHH--TTCS------CEEEEEEEECCGG---GSCHHHHHHHHHHHHHHHG
T ss_pred cCCCCCCCeEecCCCCHHHHHHHHHHHHHHHHh--cCCC------CCCcceEEecCCC---CCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 55 9999999 7888 8999999999998 8999999999999999999
Q ss_pred hhcCCCCcE
Q psy8846 216 LGMQPCDHI 224 (568)
Q Consensus 216 ~~I~~~~rv 224 (568)
++|+|..++
T Consensus 144 ~~iG~~~di 152 (424)
T 3k92_A 144 QIVGPTKDI 152 (424)
T ss_dssp GGCBTTTEE
T ss_pred HhcCCCCCc
Confidence 999998764
No 18
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=99.95 E-value=1e-29 Score=272.89 Aligned_cols=140 Identities=13% Similarity=0.148 Sum_probs=128.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhhhchHHHhhhhhhhhhhhhHHhhhccCCCcCeEEEEEEeEEecCCceEEEeeeeeeec
Q psy8846 59 AENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHS 138 (568)
Q Consensus 59 ~~~p~f~~~v~~~~~~aa~~l~~~l~~~~~~~~~~~~~~~~v~~iL~~i~~p~rvl~vsfPvr~DdG~~ev~~GYRvQHs 138 (568)
..+|+|++.|+.+|+.++.+++ + .+.+.++|+.|++|+|+++|+|||+||||++++|+|||||||
T Consensus 28 ~~~~ef~qa~~e~~~~~~~~~~--~-------------~p~~~~~~~~l~~P~r~i~~~vp~~~D~G~~~v~~GyRvqhn 92 (456)
T 3r3j_A 28 KNEPEFLQAFEEVLSCLKPVFK--K-------------DNVYIGVLENIAEPERVIQFRVPWINDKGEHKMNRGFRVQYN 92 (456)
T ss_dssp TTCHHHHHHHHHHHHHTHHHHH--H-------------CTHHHHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred CCCCcHHHHHHHHHHHHHHHHh--h-------------ChHhhHHHHhccCCceEEEEEEEEEeCCCcEEEEEEEEEEEC
Confidence 4789999999999999999988 2 223446777779999999999999999999999999999999
Q ss_pred CCCCCCCCCceeccccCCccc--ch--hhhccCCCCCCCCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhhhh
Q psy8846 139 THRTPCKGATAVQSQQRNLHD--IP--EKLKDIPTAENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGI 214 (568)
Q Consensus 139 ~~rgP~KGGIR~~~~~~~~~~--l~--~t~k~~~T~~~~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I 214 (568)
+++||+||||||||.++.+|+ |+ |||||++ .++| +++.||+..+||+ ++|.+|+++++|+|+.+|
T Consensus 93 ~a~GPakGGiR~~p~v~~~ev~~La~~mt~KnAl--~~lP------~GGgKGgi~~DPk---~~s~~el~r~~r~f~~eL 161 (456)
T 3r3j_A 93 SVLGPYKGGLRFHPAVNLSVIKFLGFEQIFKNSL--TTLP------MGGGKGGSDFDPK---GKSENEILKFCQSFMTNL 161 (456)
T ss_dssp CSSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHH--TSSC------CCEEEEEESCCCT---TCCHHHHHHHHHHHHHHH
T ss_pred CcCCCccCceEecCCCCHHHHHHHHHHHHHHHHh--cCCC------CCcceeEEecCCC---CCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999 55 9999999 6888 8999999999998 899999999999999999
Q ss_pred hhhcCCCCcE
Q psy8846 215 LLGMQPCDHI 224 (568)
Q Consensus 215 ~~~I~~~~rv 224 (568)
..+|+|..++
T Consensus 162 ~~~iGp~~Dv 171 (456)
T 3r3j_A 162 FRYIGPNTDV 171 (456)
T ss_dssp GGGCBTTTEE
T ss_pred HHhcCCCCCc
Confidence 9999999887
No 19
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=99.94 E-value=8.5e-29 Score=265.87 Aligned_cols=142 Identities=10% Similarity=0.059 Sum_probs=125.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhhhchHHHhhhhhhhhhhhhHHhhhccCCCcCeEEEEEEeEEecCCceEEEeeeeeeec
Q psy8846 59 AENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHS 138 (568)
Q Consensus 59 ~~~p~f~~~v~~~~~~aa~~l~~~l~~~~~~~~~~~~~~~~v~~iL~~i~~p~rvl~vsfPvr~DdG~~ev~~GYRvQHs 138 (568)
..+|.|.+.|...++.-..+++. .++ .++ ..||+.|++|+|+|+|++||+||||++++|+|||||||
T Consensus 22 ~~~~ef~qa~~e~~~~l~~~~~~-~p~---------y~~---~~~~e~l~~PeR~i~~~vp~~~D~G~~~v~~GyRvqhn 88 (450)
T 4fcc_A 22 PNQTEFAQAVREVMTTLWPFLEQ-NPK---------YRQ---MSLLERLVEPERVIQFRVVWVDDRNQVQVNRAWRVQFS 88 (450)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHH-CGG---------GTS---TTHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred cCChHHHHHHHHHHHHHHHHHHh-Chh---------hhh---hhHHHHHhCCceEEEEEEEEEECCCcEEEEEEEEEEEC
Confidence 46788999999999988777762 111 112 34566669999999999999999999999999999999
Q ss_pred CCCCCCCCCceeccccCCccc--ch--hhhccCCCCCCCCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhhhh
Q psy8846 139 THRTPCKGATAVQSQQRNLHD--IP--EKLKDIPTAENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGI 214 (568)
Q Consensus 139 ~~rgP~KGGIR~~~~~~~~~~--l~--~t~k~~~T~~~~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I 214 (568)
+++||+|||+||||.|+++++ |+ |||||++ .++| +++.||+..+||+ .+|..|+++++|+|..++
T Consensus 89 ~alGP~kGG~Rfhp~v~l~ev~~La~~mT~KnAl--~gLP------~GGgKggi~~DPk---~~s~~El~R~~~~f~~eL 157 (450)
T 4fcc_A 89 SAIGPYKGGMRFHPSVNLSILKFLGFEQTFKNAL--TTLP------MGGGKGGSDFDPK---GKSEGEVMRFCQALMTEL 157 (450)
T ss_dssp CSSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHH--TTSS------CCEEEEEESCCCT---TCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCceEecCCCCHHHHHHHHHHHHHHHHH--cCCC------CCCCceEEecCCC---cCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999 55 9999999 7888 8999999999998 899999999999999999
Q ss_pred hhhcCCCCcE
Q psy8846 215 LLGMQPCDHI 224 (568)
Q Consensus 215 ~~~I~~~~rv 224 (568)
..+|+|..++
T Consensus 158 ~~~iG~d~dv 167 (450)
T 4fcc_A 158 YRHLGADTDV 167 (450)
T ss_dssp GGGCBTTTEE
T ss_pred hheecCCCCC
Confidence 9999998776
No 20
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=99.94 E-value=5.4e-29 Score=268.37 Aligned_cols=140 Identities=11% Similarity=0.053 Sum_probs=127.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhhhchHHHhhhhhhhhhhhhHHhhhccCCCcCeEEEEEEeEEecCCceEEEeeeeeeec
Q psy8846 59 AENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHS 138 (568)
Q Consensus 59 ~~~p~f~~~v~~~~~~aa~~l~~~l~~~~~~~~~~~~~~~~v~~iL~~i~~p~rvl~vsfPvr~DdG~~ev~~GYRvQHs 138 (568)
..+|+|+++++.+|++++++++ +.+ ...++|+.|++|+|+++|+|||++|||++++|+|||||||
T Consensus 41 ~~~~e~~~~~~~~~~~~~~~~~--~~p-------------~~~~~le~l~~Per~i~~~vp~~~D~G~v~v~~Gyrvqhn 105 (470)
T 2bma_A 41 PNQVEFLQAFHEILYSLKPLFM--EEP-------------KYLPIIETLSEPERAIQFRVCWLDDNGVQRKNRCFRVQYN 105 (470)
T ss_dssp TTCHHHHHHHHHHHHHTHHHHH--HCT-------------THHHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred CCCchHHHHHHHHHHHHHHHhc--cCh-------------hhhHHHHHhcCCceEEEEEEEEEeCCCCEEEEEEEEEEEC
Confidence 4689999999999999999998 221 1226677779999999999999999999999999999999
Q ss_pred CCCCCCCCCceeccccCCccc--ch--hhhccCCCCCCCCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhhhh
Q psy8846 139 THRTPCKGATAVQSQQRNLHD--IP--EKLKDIPTAENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGI 214 (568)
Q Consensus 139 ~~rgP~KGGIR~~~~~~~~~~--l~--~t~k~~~T~~~~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I 214 (568)
+++||+||||||||+|+.+++ |+ |||||++ .++| +++.||+..+||+ .+|..|+++++|+|+.+|
T Consensus 106 ~a~GPakGGiR~hp~v~~~ev~~La~~mt~KnAl--~~lP------~GGgKGgi~~DPk---~~S~~El~r~~r~f~~~L 174 (470)
T 2bma_A 106 SALGPYKGGLRFHPSVNLSIVKFLGFEQIFKNSL--TGLS------MGGGKGGSDFDPK---GKSDNEILKFCQAFMNEL 174 (470)
T ss_dssp CSSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHH--TCSS------CEEEEEEESCCCT---TCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCeEeeCCCCHHHHHHHHHHHHHHHHh--cCCC------CCCcceEEeCCCC---cCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999 66 9999999 7888 8999999999998 889999999999999999
Q ss_pred hhhcCCCCcE
Q psy8846 215 LLGMQPCDHI 224 (568)
Q Consensus 215 ~~~I~~~~rv 224 (568)
..+|+|..++
T Consensus 175 ~~~iGp~~Dv 184 (470)
T 2bma_A 175 YRHIGPCTDV 184 (470)
T ss_dssp GGGCBTTTEE
T ss_pred hhccCCCCCc
Confidence 9999998877
No 21
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=99.94 E-value=4.4e-28 Score=259.21 Aligned_cols=137 Identities=20% Similarity=0.248 Sum_probs=125.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhhhchHHHhhhhhhhhhhhhHHhhhccCCCcCeEEEEEEeEEecCCceEEEeeeeeeec
Q psy8846 59 AENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHS 138 (568)
Q Consensus 59 ~~~p~f~~~v~~~~~~aa~~l~~~l~~~~~~~~~~~~~~~~v~~iL~~i~~p~rvl~vsfPvr~DdG~~ev~~GYRvQHs 138 (568)
.++++||++++.+|++++.+++ +.+ . +|+.|++|+|+++|+|||+||||++++|+|||||||
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~--~~~-------------~---~~~~l~~P~r~i~~~~p~~~D~G~~~~~~g~rv~hn 70 (419)
T 3aoe_E 9 PEDPGLWDTYLEWLERALKVAG--VHP-------------T---TLEYLAHPKRLVTLSLPVVMDDGKVRIFQGYRVVHD 70 (419)
T ss_dssp SSCCHHHHHHHHHHHHHHTTSC--CCH-------------H---HHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHhC--CCH-------------H---HHhhcCCCCeEEEEEEEEEecCCCEEEEEEEEEEEC
Confidence 5777899999999999999998 322 2 444459999999999999999999999999999999
Q ss_pred CCCCCCCCCceeccccCCccc--ch--hhhccCCCCCCCCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhhhh
Q psy8846 139 THRTPCKGATAVQSQQRNLHD--IP--EKLKDIPTAENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGI 214 (568)
Q Consensus 139 ~~rgP~KGGIR~~~~~~~~~~--l~--~t~k~~~T~~~~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I 214 (568)
+++||+||||||||.++++|+ |+ |||||++ .++| +++.||+..+||+ .+|..|++++.|+|..+|
T Consensus 71 ~~~GPakGGiR~~p~v~~~ev~~La~~mt~KnAl--~~lP------~GGgKGgi~~dP~---~~s~~El~r~~r~f~~~l 139 (419)
T 3aoe_E 71 IARGPAKGGVRLDPGVTLGQTAGLAAWMTLKAAV--YDLP------FGGAAGGIAVDPK---GLSPQELERLVRRYTAEL 139 (419)
T ss_dssp CSSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHH--TTCS------CEEEEEEECSCGG---GSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCcCCeEecCCCCHHHHHHHHHHHHHHHHh--ccCC------CCCccEEEecCCC---CCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999 55 9999999 7888 8999999999998 889999999999999999
Q ss_pred hhhcCCCCcE
Q psy8846 215 LLGMQPCDHI 224 (568)
Q Consensus 215 ~~~I~~~~rv 224 (568)
.++|+|...+
T Consensus 140 ~~~iGp~~dv 149 (419)
T 3aoe_E 140 VGLIGPDSDI 149 (419)
T ss_dssp TTTCBTTTEE
T ss_pred HHhcCCCCEE
Confidence 9999998775
No 22
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=99.93 E-value=8.5e-28 Score=258.64 Aligned_cols=142 Identities=17% Similarity=0.188 Sum_probs=127.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhhhchHHHhhhhhhhhhhhhHHhhhccCCCcCeEEEEEEeEEecCCceEEEeeeeeeec
Q psy8846 59 AENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHS 138 (568)
Q Consensus 59 ~~~p~f~~~v~~~~~~aa~~l~~~l~~~~~~~~~~~~~~~~v~~iL~~i~~p~rvl~vsfPvr~DdG~~ev~~GYRvQHs 138 (568)
..+|+|+++++.+|++++.+++ +.++.. + .++|+.|++|+|++.|+|||++|||++++|+|||||||
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--------~---~~~~~~l~~Per~i~~~vp~~~d~G~~~v~~G~rv~hn 82 (449)
T 1bgv_A 16 ADEPEFVQTVEEVLSSLGPVVD--AHPEYE--------E---VALLERMVIPERVIEFRVPWEDDNGKVHVNTGYRVQFN 82 (449)
T ss_dssp TTCHHHHHHHHHHHHTTHHHHH--TCHHHH--------H---TTHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred CCCccHHHHHHHHHHHHHHHhc--cChhhh--------h---hhHHHHhcCCceEEEEEEEEEeCCCCEEEEeEEEEEEc
Confidence 4679999999999999999998 433321 2 24666669999999999999999999999999999999
Q ss_pred CCCCCCCCCceeccccCCccc--ch--hhhccCCCCCCCCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhhhh
Q psy8846 139 THRTPCKGATAVQSQQRNLHD--IP--EKLKDIPTAENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGI 214 (568)
Q Consensus 139 ~~rgP~KGGIR~~~~~~~~~~--l~--~t~k~~~T~~~~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I 214 (568)
+++||+||||||||+++.+|+ |+ |||||++ .++| +++.||+..+||+ .+|..|++++.|.|+.+|
T Consensus 83 ~~~GPakGGlR~~p~v~~~ev~~La~~mt~KnAl--~~lP------~GGgKGGi~~dP~---~~s~~e~~r~~r~f~~~L 151 (449)
T 1bgv_A 83 GAIGPYKGGLRFAPSVNLSIMKFLGFEQAFKDSL--TTLP------MGGAKGGSDFDPN---GKSDREVMRFCQAFMTEL 151 (449)
T ss_dssp CSSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHH--TSSS------CCEEEEEESCCCT---TCCHHHHHHHHHHHHHHH
T ss_pred CCcCCCCCCeeecCCCCHHHHHHHHHHHHHHHHh--hCCC------CCCccEEEECCCc---cCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999 55 9999999 7888 8999999999997 788899999999999999
Q ss_pred hhhcCCCCcE
Q psy8846 215 LLGMQPCDHI 224 (568)
Q Consensus 215 ~~~I~~~~rv 224 (568)
.++|+|..++
T Consensus 152 ~~~ig~~~dv 161 (449)
T 1bgv_A 152 YRHIGPDIDV 161 (449)
T ss_dssp GGGCBTTTEE
T ss_pred hheeCCCCcC
Confidence 9999998885
No 23
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=99.93 E-value=2.1e-27 Score=254.39 Aligned_cols=134 Identities=17% Similarity=0.176 Sum_probs=122.2
Q ss_pred CCHHHHHHHHHHHHHHHhhhhchHHHhhhhhhhhhhhhHHhhhccCCCcCeEEEEEEeEEecCCceEEEeeeeeeecCCC
Q psy8846 62 PKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHSTHR 141 (568)
Q Consensus 62 p~f~~~v~~~~~~aa~~l~~~l~~~~~~~~~~~~~~~~v~~iL~~i~~p~rvl~vsfPvr~DdG~~ev~~GYRvQHs~~r 141 (568)
.+||++++.+|++++.+++ +.+ ++|+.|++|+|+++|+|||+||||++++|+|||||||+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~--~~~----------------~~~~~l~~p~r~i~~~~p~~~d~G~~~~~~g~rv~hn~~~ 66 (421)
T 2yfq_A 5 LNPLVAAQEKVRIACEKLG--CDP----------------AVYELLKEPQRVIEISIPVKMDDGTVKVFKGWRSAHSSAV 66 (421)
T ss_dssp -CHHHHHHHHHHHHHHHHT--CCH----------------HHHHHHSSCSEEEEEEEEEEETTTEEEEEEEEEEECCCSS
T ss_pred cCHHHHHHHHHHHHHHHhC--CCH----------------HHHhhccCCceEEEEEEEEEecCCCEEEEEEEEEEECCCC
Confidence 3699999999999999998 322 2444459999999999999999999999999999999999
Q ss_pred CCCCCCceeccccCCccc--ch--hhhccCCCCCCCCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhhhhhhh
Q psy8846 142 TPCKGATAVQSQQRNLHD--IP--EKLKDIPTAENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLG 217 (568)
Q Consensus 142 gP~KGGIR~~~~~~~~~~--l~--~t~k~~~T~~~~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I~~~ 217 (568)
||+||||||||.++++|+ |+ |||||++ .++| +++.||+..+||+ .+|.+|++++.|+|..+|.++
T Consensus 67 GP~kGGiR~~p~v~~~ev~~La~~mt~KnAl--~~lP------~GGgKggi~~dP~---~~s~~el~r~~r~f~~~l~~~ 135 (421)
T 2yfq_A 67 GPSKGGVRFHPNVNMDEVKALSLWMTFKGGA--LGLP------YGGGKGGICVDPA---ELSERELEQLSRGWVRGLYKY 135 (421)
T ss_dssp SSEEEEEEEESSCCHHHHHHHHHHHHHHHHH--HTCS------CEEEEEEEECCGG---GSCHHHHHHHHHHHHHHHGGG
T ss_pred CCCcCCEEeeCCCCHHHHHHHHHHHHHHHHh--cCCC------CCCcceEEecCCC---CCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999 55 9999999 6888 8999999999998 889999999999999999999
Q ss_pred cCCCCcE
Q psy8846 218 MQPCDHI 224 (568)
Q Consensus 218 I~~~~rv 224 (568)
|+|..++
T Consensus 136 iG~~~dv 142 (421)
T 2yfq_A 136 LGDRIDI 142 (421)
T ss_dssp CBTTTEE
T ss_pred cCCCcEE
Confidence 9998775
No 24
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=99.93 E-value=8.1e-27 Score=249.32 Aligned_cols=135 Identities=24% Similarity=0.335 Sum_probs=121.3
Q ss_pred CCCHHHHHHHHHHHHHHHhhhhchHHHhhhhhhhhhhhhHHhhhccCCCcCeEEEEEEeEEecCCceEEEeeeeeeecCC
Q psy8846 61 NPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHSTH 140 (568)
Q Consensus 61 ~p~f~~~v~~~~~~aa~~l~~~l~~~~~~~~~~~~~~~~v~~iL~~i~~p~rvl~vsfPvr~DdG~~ev~~GYRvQHs~~ 140 (568)
+|+||++++.+|++|+++++ +.++ +|+.|++|+|+++|++||+||||++++|+|||+|||++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~--~~~~----------------~~~~l~~P~r~i~~~~p~~~D~G~~~~~~g~rv~~~~~ 63 (415)
T 2tmg_A 2 EKSLYEMAVEQFNRAASLMD--LESD----------------LAEVLRRPKRVLIVEFPVRMDDGHVEVFTGYRVQHNVA 63 (415)
T ss_dssp --CHHHHHHHHHHHHHHHTT--CCHH----------------HHHHHHSCSEEEEEEEEEECTTSCEEEEEEEEEEEECT
T ss_pred CCCHHHHHHHHHHHHHHHhC--CCHH----------------HHHhcCCCCeEEEEEEEEEecCCcEEEEEEEEEEECCC
Confidence 58899999999999999998 3322 33444799999999999999999999999999999999
Q ss_pred CCCCCCCceeccccCCccc--ch--hhhccCCCCCCCCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhhhhhh
Q psy8846 141 RTPCKGATAVQSQQRNLHD--IP--EKLKDIPTAENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILL 216 (568)
Q Consensus 141 rgP~KGGIR~~~~~~~~~~--l~--~t~k~~~T~~~~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I~~ 216 (568)
+||+||||||||+++++|+ |+ |||||++ .++| +++.||+..+||+ .+|.+|++++.|+|..+|.+
T Consensus 64 ~GpakGGiR~~p~v~~~ev~~La~~mt~KnAl--~~lP------~GG~KGgi~~dP~---~~s~~e~~r~~r~f~~~l~~ 132 (415)
T 2tmg_A 64 RGPAKGGIRYHPDVTLDEVKALAFWMTWKTAV--MNLP------FGGGKGGVRVDPK---KLSRRELERLSRRFFREIQV 132 (415)
T ss_dssp TSSEECCEEEESSCCHHHHHHHHHHHHHHHHH--HTCS------CCEEEEEEECCGG---GSCHHHHHHHHHHHHHHTGG
T ss_pred CCCCCCcEEeeCCCCHHHHHHHHHHHHHHHHh--cCCC------CCCcceEEeCCCC---CCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 55 9999999 6788 8999999999997 88899999999999999999
Q ss_pred hcCCCCcE
Q psy8846 217 GMQPCDHI 224 (568)
Q Consensus 217 ~I~~~~rv 224 (568)
+++|...+
T Consensus 133 ~ig~~~dv 140 (415)
T 2tmg_A 133 IIGPYNDI 140 (415)
T ss_dssp GCBTTTEE
T ss_pred HhCCCcEE
Confidence 99988764
No 25
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.92 E-value=1.8e-26 Score=247.49 Aligned_cols=135 Identities=22% Similarity=0.301 Sum_probs=122.3
Q ss_pred CCCHHHHHHHHHHHHHHHhhhhchHHHhhhhhhhhhhhhHHhhhccCCCcCeEEEEEEeEEecCCceEEEeeeeeeecCC
Q psy8846 61 NPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHSTH 140 (568)
Q Consensus 61 ~p~f~~~v~~~~~~aa~~l~~~l~~~~~~~~~~~~~~~~v~~iL~~i~~p~rvl~vsfPvr~DdG~~ev~~GYRvQHs~~ 140 (568)
+++||++++.+|++++.+++ +.+ ++|+.|++|+|+++|+|||+||||++++|+|||+|||++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~--~~~----------------~~~~~l~~p~r~~~~~~p~~~d~G~~~~~~g~rv~~~~~ 63 (419)
T 1gtm_A 2 EADPYEIVIKQLERAAQYME--ISE----------------EALEFLKRPQRIVEVTIPVEMDDGSVKVFTGFRVQHNWA 63 (419)
T ss_dssp -CTHHHHHHHHHHHHGGGSC--CCH----------------HHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEECT
T ss_pred CccHHHHHHHHHHHHHHHhC--CCh----------------hhhhcCCCCceEEEEEEEEEecCCCEEEEEEEEEEECCC
Confidence 58899999999999999988 322 244444899999999999999999999999999999999
Q ss_pred CCCCCCCceeccccCCccc--ch--hhhccCCCCCCCCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhhhhhh
Q psy8846 141 RTPCKGATAVQSQQRNLHD--IP--EKLKDIPTAENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILL 216 (568)
Q Consensus 141 rgP~KGGIR~~~~~~~~~~--l~--~t~k~~~T~~~~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I~~ 216 (568)
+||+||||||||.++++|+ |+ |||||++ .++| +++.||+..+||+ .+|.+|++++.|+|..+|.+
T Consensus 64 ~Gp~kGG~R~~~~~~~~ev~~La~~mt~Knal--~~lp------~GG~Kggi~~dP~---~~s~~e~~~~~r~f~~~l~~ 132 (419)
T 1gtm_A 64 RGPTKGGIRWHPEETLSTVKALAAWMTWKTAV--MDLP------YGGGKGGIIVDPK---KLSDREKERLARGYIRAIYD 132 (419)
T ss_dssp TSSEECCEEECTTCCHHHHHHHHHHHHHHHHH--TTCS------CEEEEEEEECCGG---GSCHHHHHHHHHHHHHHHGG
T ss_pred CCCCcCCEEeeCCCCHHHHHHHHHHHHHHHHh--cCCC------CCCceeEEecCCC---CCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 55 9999999 6788 8999999999997 88899999999999999999
Q ss_pred hcCCCCcE
Q psy8846 217 GMQPCDHI 224 (568)
Q Consensus 217 ~I~~~~rv 224 (568)
+++|...+
T Consensus 133 ~~g~~~dv 140 (419)
T 1gtm_A 133 VISPYEDI 140 (419)
T ss_dssp GCBTTTEE
T ss_pred hcCCCcEE
Confidence 99988764
No 26
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=99.92 E-value=3e-26 Score=245.19 Aligned_cols=136 Identities=20% Similarity=0.291 Sum_probs=121.9
Q ss_pred CCCCHHHHHHHHHHHHHHHhhhhchHHHhhhhhhhhhhhhHHhhhccCCCcCeEEEEEEeEEecCCceEEEeeeeeeecC
Q psy8846 60 ENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQPCDHIIEISFPVRRDSGDYEIITGYRAQHST 139 (568)
Q Consensus 60 ~~p~f~~~v~~~~~~aa~~l~~~l~~~~~~~~~~~~~~~~v~~iL~~i~~p~rvl~vsfPvr~DdG~~ev~~GYRvQHs~ 139 (568)
+.+|||++++.+|++++.+++ +.+ ++|+.|++|+|++.|+|||+||||++++|+|||+|||+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~--~~~----------------~~~~~l~~P~r~i~v~~p~~~D~G~~~~~~G~rv~~~~ 63 (421)
T 1v9l_A 2 ERTGFLEYVLNYVKKGVELGG--FPE----------------DFYKILSRPRRVLIVNIPVRLDGGGFEVFEGYRVQHCD 63 (421)
T ss_dssp --CHHHHHHHHHHHHHHHHTT--CCH----------------HHHHHHHSCSEEEEEEEEEECSSSCEEEEEEEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHhC--CCH----------------HHHHhccCCceEEEEEEEEEecCCcEEEEEEEEeecCC
Confidence 356899999999999999998 332 23444478999999999999999999999999999999
Q ss_pred CCCCCCCCceeccccCCccc--ch--hhhccCCCCCCCCHHHHHHHHHhhhhhhccccchhhhhhccchhhhhhhhhhhh
Q psy8846 140 HRTPCKGATAVQSQQRNLHD--IP--EKLKDIPTAENPKFFDMVEFFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGIL 215 (568)
Q Consensus 140 ~rgP~KGGIR~~~~~~~~~~--l~--~t~k~~~T~~~~~~~~~~~~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I~ 215 (568)
++||+||||||||+++++|+ |+ |||||++ .++| +++.||+..+||+ .+|.+|++++.|+|..+|.
T Consensus 64 ~~GpakGG~R~~p~v~~~ev~~La~~mt~KnAl--~~lP------~GG~KGgi~~dP~---~~s~~e~~r~~r~f~~~l~ 132 (421)
T 1v9l_A 64 VLGPYKGGVRFHPEVTLADDVALAILMTLKNSL--AGLP------YGGAKGAVRVDPK---KLSQRELEELSRGYARAIA 132 (421)
T ss_dssp SSSSEEEEEECCTTCCHHHHHHHHHHHHHHHHH--TTCS------CCEEEEEECSCGG---GSCHHHHHHHHHHHHHHHG
T ss_pred cCCCccccEEecCCCCHHHHHHHHHHHHHHHHh--hCCC------CCCcceEEeCCCC---CCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 55 9999999 6788 8999999999997 8889999999999999999
Q ss_pred hhcCCCCcE
Q psy8846 216 LGMQPCDHI 224 (568)
Q Consensus 216 ~~I~~~~rv 224 (568)
++++|...+
T Consensus 133 ~~iG~~~dv 141 (421)
T 1v9l_A 133 PLIGDVVDI 141 (421)
T ss_dssp GGCBTTTEE
T ss_pred HhcCCCeEE
Confidence 999988774
No 27
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.45 E-value=3.3e-15 Score=157.05 Aligned_cols=94 Identities=11% Similarity=-0.104 Sum_probs=82.2
Q ss_pred CcCeEEEEEEeEEecCCceEEEeeeeeeecCCCCCCCCCceeccccCCc----cc--ch--hhhccCCCCCCCCHHHHHH
Q psy8846 109 PCDHIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGATAVQSQQRNL----HD--IP--EKLKDIPTAENPKFFDMVE 180 (568)
Q Consensus 109 ~p~rvl~vsfPvr~DdG~~ev~~GYRvQHs~~rgP~KGGIR~~~~~~~~----~~--l~--~t~k~~~T~~~~~~~~~~~ 180 (568)
.|++++.++=| ...++|||||||+++||+||||||||.++.+ |+ |+ |||||++ .++|
T Consensus 9 ~~e~v~~~~d~-------~~~~~~~~~~h~~~~GP~kGG~R~~p~v~~~~~~~ev~~La~~mt~K~al--~~lp------ 73 (355)
T 1c1d_A 9 DGEMTVTRFDA-------MTGAHFVIRLDSTQLGPAAGGTRAAQYSNLADALTDAGKLAGAMTLKMAV--SNLP------ 73 (355)
T ss_dssp CSSEEEEEEET-------TTTEEEEEEEEECSSSSEEEEEEEECCSSHHHHHHHHHHHHHHHHHHHHH--TTCS------
T ss_pred CccEEEEEEcc-------ccceEEEEEEECCCCCCCCCcEEecCCCChHHHHHHHHHHHHHHHHHHHh--hCCC------
Confidence 68888876544 5669999999999999999999999999876 55 55 9999999 6888
Q ss_pred HHHhhhhhhc-cccchhh-hhhccchhhhhhhhhhhhhhcCC
Q psy8846 181 FFFHRACQIA-EDKLVED-IKGRMTIEDKKKKVRGILLGMQP 220 (568)
Q Consensus 181 ~~~~kAa~il-dpk~~~~-l~~~~~~~~~r~~~~~I~~~I~~ 220 (568)
+++.|++..+ ||+ . ||+.+++++.|.|.+.+.+++++
T Consensus 74 ~GG~Kggi~~~dP~---~~~s~~~~e~~~r~~~~~~~~l~g~ 112 (355)
T 1c1d_A 74 MGGGKSVIALPAPR---HSIDPSTWARILRIHAENIDKLSGN 112 (355)
T ss_dssp CEEEEEEEECSSCG---GGCCHHHHHHHHHHHHHHHHHTTTS
T ss_pred CCCceeeEeccCcc---cccChhhHHHHHHHHHHHHHHhcCC
Confidence 8999999999 998 6 88889999999999999998874
No 28
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=99.40 E-value=2.6e-14 Score=150.74 Aligned_cols=91 Identities=10% Similarity=-0.049 Sum_probs=76.9
Q ss_pred CcCeEEEEEEeEEecCCceEEEeeeeeeecCCCCCCCCCceeccccCCc----cc--ch--hhhccCCCCCCCCHHHHHH
Q psy8846 109 PCDHIIEISFPVRRDSGDYEIITGYRAQHSTHRTPCKGATAVQSQQRNL----HD--IP--EKLKDIPTAENPKFFDMVE 180 (568)
Q Consensus 109 ~p~rvl~vsfPvr~DdG~~ev~~GYRvQHs~~rgP~KGGIR~~~~~~~~----~~--l~--~t~k~~~T~~~~~~~~~~~ 180 (568)
.|++++.++= +...++|||||||+++||+||||||||.++.+ |+ |+ |||||++ .++|
T Consensus 11 ~~e~v~~~~d-------~~~~~~~~~~~h~~~~Gp~kGG~R~~p~v~~~~~~~e~~~La~~mt~K~al--~~lp------ 75 (364)
T 1leh_A 11 DYEQLVFCQD-------EASGLKAVIAIHDTTLGPALGGARMWTYNAEEEAIEDALRLARGMTYKNAA--AGLN------ 75 (364)
T ss_dssp TCCEEEEEEE-------TTTTEEEEEEEEECSSSSEECCEEEECCSCHHHHHHHHHHHHHHHHHHHHH--TTCS------
T ss_pred CCeEEEEEEc-------cCcceEEEEEEECCCCCCCCCcEEecCCCChHHHHHHHHHHHHHHHHHHHh--cCCC------
Confidence 5888886642 45679999999999999999999999999876 55 55 9999999 7888
Q ss_pred HHHhhhhhhccccchhhhhhccchhhhhhhhhhhhhhcCC
Q psy8846 181 FFFHRACQIAEDKLVEDIKGRMTIEDKKKKVRGILLGMQP 220 (568)
Q Consensus 181 ~~~~kAa~ildpk~~~~l~~~~~~~~~r~~~~~I~~~I~~ 220 (568)
+++.||+..+||+ .. .++++.|.|.+.+.+++++
T Consensus 76 ~GG~Kggi~~dP~---~~---~~~~~~r~~~~~~~~l~g~ 109 (364)
T 1leh_A 76 LGGGKTVIIGDPF---AD---KNEDMFRALGRFIQGLNGR 109 (364)
T ss_dssp CEEEEEEEESCTT---TT---CCHHHHHHHHHHHHTTTTS
T ss_pred CcCcceEEeCCCC---CC---CHHHHHHHHHHHHHHhcCc
Confidence 8999999999997 33 3678888888888888764
No 29
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=90.92 E-value=0.86 Score=45.94 Aligned_cols=147 Identities=10% Similarity=0.043 Sum_probs=84.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeecccc-----CCCChh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVE-----KVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~-----~~It~~ 427 (568)
|++|+.+|+.|.+.|.+|++ .+.+.++..++.+. |++..+.-.=+..+|||++-|--. .++..+
T Consensus 14 G~MG~~mA~~L~~~G~~V~v---~dr~~~~~~~l~~~--------G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~ 82 (297)
T 4gbj_A 14 GNLGTPIAEILLEAGYELVV---WNRTASKAEPLTKL--------GATVVENAIDAITPGGIVFSVLADDAAVEELFSME 82 (297)
T ss_dssp STTHHHHHHHHHHTTCEEEE---C-------CTTTTT--------TCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHH
T ss_pred HHHHHHHHHHHHHCCCeEEE---EeCCHHHHHHHHHc--------CCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHH
Confidence 99999999999999999987 55566555443332 455543322233589999877543 234444
Q ss_pred hHhccc-ceEEEecCCcch--HHHHHHHhccCCCccc-------------------ccCc-HH---HHhh---c------
Q psy8846 428 NAHKIQ-AKIIAEAANESV--QESLERRFGNVGGRIP-------------------VTPS-ES---FQKR---I------ 472 (568)
Q Consensus 428 na~~i~-AkiIvE~AN~~~--~~~l~~~l~~~GggI~-------------------vvPd-e~---~q~~---~------ 472 (568)
-++.++ -.+|++..+..- ...+.+.+..+|...+ +--+ +. ++.. +
T Consensus 83 ~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg~~~a~~g~l~im~gG~~~~~~~~~~~l~~~g~~i~~ 162 (297)
T 4gbj_A 83 LVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFARPEAVRAKVGNICLSGNAGAKERIKPIVENFVKGVFD 162 (297)
T ss_dssp HHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCCEEEEEECHHHHHHHHHHHHTTCSEEEE
T ss_pred HHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCCccccccccceeecccchhHHHHHHHHHHHhhCCeEE
Confidence 344443 468888888542 3345555544432111 1111 11 1111 1
Q ss_pred -cCC----CcHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhh
Q psy8846 473 -SGA----SEKDIVHSGLDYTMERSARAIMKTAMKYNLGHLDINAH 513 (568)
Q Consensus 473 -~~~----we~e~V~~~L~~~M~~a~~~V~~~a~~~~~~~~dlR~A 513 (568)
++. .--..+++-+...+..++.+.+..+++.+ +|+.+.
T Consensus 163 ~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~G---ld~~~~ 205 (297)
T 4gbj_A 163 FGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKNG---ISRQSI 205 (297)
T ss_dssp CCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CCHHHH
T ss_pred ecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CCHHHH
Confidence 111 13455788899999999999999999998 777654
No 30
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=89.15 E-value=0.42 Score=51.63 Aligned_cols=80 Identities=18% Similarity=0.173 Sum_probs=57.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccc-cCCCChhhHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAV-EKVITKNNAHK 431 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl-~~~It~~na~~ 431 (568)
|++|..+|+.|...|++|++ .++|+....+.... |.+.++-++++. .|||++.|.- .+.|+.+....
T Consensus 256 G~IGr~vA~~lrafGa~Viv---~d~dp~~a~~A~~~--------G~~vv~LeElL~-~ADIVv~atgt~~lI~~e~l~~ 323 (464)
T 3n58_A 256 GDVGKGSAQSLAGAGARVKV---TEVDPICALQAAMD--------GFEVVTLDDAAS-TADIVVTTTGNKDVITIDHMRK 323 (464)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---ECSSHHHHHHHHHT--------TCEECCHHHHGG-GCSEEEECCSSSSSBCHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEE---EeCCcchhhHHHhc--------CceeccHHHHHh-hCCEEEECCCCccccCHHHHhc
Confidence 99999999999999999987 45676554433322 334444445553 7999999873 56899999998
Q ss_pred cc-ceEEEecCCcc
Q psy8846 432 IQ-AKIIAEAANES 444 (568)
Q Consensus 432 i~-AkiIvE~AN~~ 444 (568)
+| -.+|+..+...
T Consensus 324 MK~GAILINvGRgd 337 (464)
T 3n58_A 324 MKDMCIVGNIGHFD 337 (464)
T ss_dssp SCTTEEEEECSSST
T ss_pred CCCCeEEEEcCCCC
Confidence 87 45666666644
No 31
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=86.61 E-value=0.95 Score=48.62 Aligned_cols=81 Identities=14% Similarity=0.159 Sum_probs=58.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccc-cCCCChhhHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAV-EKVITKNNAHK 431 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl-~~~It~~na~~ 431 (568)
|++|..+|+.|...|++|++ .+.|.......... |.+..+-++++. .|||++.|.- .+.|+.+....
T Consensus 220 G~IG~~vA~~Lka~Ga~Viv---~D~~p~~a~~A~~~--------G~~~~sL~eal~-~ADVVilt~gt~~iI~~e~l~~ 287 (436)
T 3h9u_A 220 GDVGKGCAAALRGFGARVVV---TEVDPINALQAAME--------GYQVLLVEDVVE-EAHIFVTTTGNDDIITSEHFPR 287 (436)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---ECSCHHHHHHHHHT--------TCEECCHHHHTT-TCSEEEECSSCSCSBCTTTGGG
T ss_pred CHHHHHHHHHHHHCCCEEEE---ECCChhhhHHHHHh--------CCeecCHHHHHh-hCCEEEECCCCcCccCHHHHhh
Confidence 99999999999999999887 45566555444332 333334445553 6999998663 57899998888
Q ss_pred cc-ceEEEecCCcch
Q psy8846 432 IQ-AKIIAEAANESV 445 (568)
Q Consensus 432 i~-AkiIvE~AN~~~ 445 (568)
++ -.+|+..|+...
T Consensus 288 MK~gAIVINvgRg~v 302 (436)
T 3h9u_A 288 MRDDAIVCNIGHFDT 302 (436)
T ss_dssp CCTTEEEEECSSSGG
T ss_pred cCCCcEEEEeCCCCC
Confidence 86 467888888663
No 32
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=85.52 E-value=0.91 Score=48.75 Aligned_cols=81 Identities=12% Similarity=0.142 Sum_probs=57.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccc-cCCCChhhHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAV-EKVITKNNAHK 431 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl-~~~It~~na~~ 431 (568)
|++|..+|+.|...|++|++ .++|+....+.... |.+..+-++++. .|||++-|.- .+.|+.+....
T Consensus 229 G~IGk~vA~~Lra~Ga~Viv---~D~dp~ra~~A~~~--------G~~v~~Leeal~-~ADIVi~atgt~~lI~~e~l~~ 296 (435)
T 3gvp_A 229 GEVGKGCCAALKAMGSIVYV---TEIDPICALQACMD--------GFRLVKLNEVIR-QVDIVITCTGNKNVVTREHLDR 296 (435)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---ECSCHHHHHHHHHT--------TCEECCHHHHTT-TCSEEEECSSCSCSBCHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEE---EeCChhhhHHHHHc--------CCEeccHHHHHh-cCCEEEECCCCcccCCHHHHHh
Confidence 99999999999999999887 45666554443322 223333334443 7999999853 67899999888
Q ss_pred cc-ceEEEecCCcch
Q psy8846 432 IQ-AKIIAEAANESV 445 (568)
Q Consensus 432 i~-AkiIvE~AN~~~ 445 (568)
++ -.+|+..++.+.
T Consensus 297 MK~gailINvgrg~~ 311 (435)
T 3gvp_A 297 MKNSCIVCNMGHSNT 311 (435)
T ss_dssp SCTTEEEEECSSTTT
T ss_pred cCCCcEEEEecCCCc
Confidence 87 457778887653
No 33
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=85.24 E-value=1.3 Score=44.90 Aligned_cols=145 Identities=9% Similarity=0.080 Sum_probs=93.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCCCChhh----
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNN---- 428 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~It~~n---- 428 (568)
|++|+.+|+.|.+.|..|++ .+.+.++..++.+. |++..+.-.=+...|||++-|-.......+.
T Consensus 12 G~MG~~mA~~L~~~G~~v~v---~dr~~~~~~~l~~~--------Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~ 80 (300)
T 3obb_A 12 GHMGAPMATNLLKAGYLLNV---FDLVQSAVDGLVAA--------GASAARSARDAVQGADVVISMLPASQHVEGLYLDD 80 (300)
T ss_dssp STTHHHHHHHHHHTTCEEEE---ECSSHHHHHHHHHT--------TCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSS
T ss_pred hHHHHHHHHHHHhCCCeEEE---EcCCHHHHHHHHHc--------CCEEcCCHHHHHhcCCceeecCCchHHHHHHHhch
Confidence 99999999999999999988 67788888887765 4554432222345899999885433222222
Q ss_pred ---Hhccc-ceEEEecCCcch--HHHHHHHhccCCCccccc--C-------------------c-HHH---Hhh---c--
Q psy8846 429 ---AHKIQ-AKIIAEAANESV--QESLERRFGNVGGRIPVT--P-------------------S-ESF---QKR---I-- 472 (568)
Q Consensus 429 ---a~~i~-AkiIvE~AN~~~--~~~l~~~l~~~GggI~vv--P-------------------d-e~~---q~~---~-- 472 (568)
++.++ -++|++..+..- ...+.+.+.++| +.++ | | +.+ +.. +
T Consensus 81 ~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G--~~~lDaPVsGg~~~A~~G~L~imvGG~~~~~~~~~p~l~~~g~ 158 (300)
T 3obb_A 81 DGLLAHIAPGTLVLECSTIAPTSARKIHAAARERG--LAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARPLFEAMGR 158 (300)
T ss_dssp SSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTT--CEEEECCEESCHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEE
T ss_pred hhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC--CEEEecCCCCCHHHHHhCCEEEEEeCCHHHHHHHHHHHHHhCC
Confidence 22233 478999888653 345666666664 3222 1 1 111 110 0
Q ss_pred -----cCC---CcHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhh
Q psy8846 473 -----SGA---SEKDIVHSGLDYTMERSARAIMKTAMKYNLGHLDINAH 513 (568)
Q Consensus 473 -----~~~---we~e~V~~~L~~~M~~a~~~V~~~a~~~~~~~~dlR~A 513 (568)
+.. .--..+++-+...+..++.+.+..+++.+ +|+.+.
T Consensus 159 ~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~G---ld~~~~ 204 (300)
T 3obb_A 159 NIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANG---LEAKVL 204 (300)
T ss_dssp EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CCHHHH
T ss_pred CEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCHHHH
Confidence 011 23456788888899999999999999988 676554
No 34
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=85.24 E-value=0.58 Score=40.91 Aligned_cols=93 Identities=10% Similarity=0.049 Sum_probs=54.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcc----cccceEEeeccccCC---CC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLM----YEPCDIFVPAAVEKV---IT 425 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll----~~~cDIliPaAl~~~---It 425 (568)
|.+|+++|+.|.+.|.+|+++ +.|.+.+....+..-.+... +. ++.+.+ -.+||+++-|.-... ..
T Consensus 15 G~iG~~la~~L~~~g~~V~~i---d~~~~~~~~~~~~~~~~~~g-d~---~~~~~l~~~~~~~~d~vi~~~~~~~~n~~~ 87 (141)
T 3llv_A 15 EAAGVGLVRELTAAGKKVLAV---DKSKEKIELLEDEGFDAVIA-DP---TDESFYRSLDLEGVSAVLITGSDDEFNLKI 87 (141)
T ss_dssp SHHHHHHHHHHHHTTCCEEEE---ESCHHHHHHHHHTTCEEEEC-CT---TCHHHHHHSCCTTCSEEEECCSCHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCeEEEE---ECCHHHHHHHHHCCCcEEEC-CC---CCHHHHHhCCcccCCEEEEecCCHHHHHHH
Confidence 999999999999999999884 45777777665532111100 00 111222 237899887754322 22
Q ss_pred hhhHhcc-cceEEEecCCcchHHHHHHH
Q psy8846 426 KNNAHKI-QAKIIAEAANESVQESLERR 452 (568)
Q Consensus 426 ~~na~~i-~AkiIvE~AN~~~~~~l~~~ 452 (568)
...+.++ ..++|+-..+....+.|++.
T Consensus 88 ~~~a~~~~~~~iia~~~~~~~~~~l~~~ 115 (141)
T 3llv_A 88 LKALRSVSDVYAIVRVSSPKKKEEFEEA 115 (141)
T ss_dssp HHHHHHHCCCCEEEEESCGGGHHHHHHT
T ss_pred HHHHHHhCCceEEEEEcChhHHHHHHHc
Confidence 2333333 35778877666655666543
No 35
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=83.70 E-value=1.8 Score=45.63 Aligned_cols=87 Identities=14% Similarity=0.129 Sum_probs=60.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeecc---------ccCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAA---------VEKV 423 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaA---------l~~~ 423 (568)
|++|+.+|+.|...|++|++. |...-. ... +....+.++++. +|||++.|. ..+.
T Consensus 125 G~IG~~vA~~l~~~G~~V~~~-----d~~~~~---~~~-------g~~~~~l~ell~-~aDvV~l~~Plt~~g~~~T~~l 188 (380)
T 2o4c_A 125 GQVGGRLVEVLRGLGWKVLVC-----DPPRQA---REP-------DGEFVSLERLLA-EADVISLHTPLNRDGEHPTRHL 188 (380)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE-----CHHHHH---HST-------TSCCCCHHHHHH-HCSEEEECCCCCSSSSSCCTTS
T ss_pred CHHHHHHHHHHHHCCCEEEEE-----cCChhh---hcc-------CcccCCHHHHHH-hCCEEEEeccCccccccchhhh
Confidence 999999999999999999873 433211 111 222223334454 899999987 6678
Q ss_pred CChhhHhcccc-eEEEecCCcch--HHHHHHHhcc
Q psy8846 424 ITKNNAHKIQA-KIIAEAANESV--QESLERRFGN 455 (568)
Q Consensus 424 It~~na~~i~A-kiIvE~AN~~~--~~~l~~~l~~ 455 (568)
|+++....++. .+++..+.+++ .+.|.+.|.+
T Consensus 189 i~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~ 223 (380)
T 2o4c_A 189 LDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEG 223 (380)
T ss_dssp BCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred cCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHh
Confidence 99888888874 58888888875 3345555544
No 36
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=83.22 E-value=1.7 Score=44.64 Aligned_cols=90 Identities=8% Similarity=0.096 Sum_probs=60.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeecc-----ccCCCChh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAA-----VEKVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaA-----l~~~It~~ 427 (568)
|++|+.+|+.|...|++|++..-+..+.+...+. |++..+.++++ ..|||++.|. ..+.|+++
T Consensus 154 G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~-----------g~~~~~l~ell-~~aDvV~l~~P~t~~t~~li~~~ 221 (330)
T 4e5n_A 154 GAIGLAMADRLQGWGATLQYHEAKALDTQTEQRL-----------GLRQVACSELF-ASSDFILLALPLNADTLHLVNAE 221 (330)
T ss_dssp SHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHH-----------TEEECCHHHHH-HHCSEEEECCCCSTTTTTCBCHH
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhc-----------CceeCCHHHHH-hhCCEEEEcCCCCHHHHHHhCHH
Confidence 9999999999999999998854333233322221 23333334554 4799999875 35688888
Q ss_pred hHhccc-ceEEEecCCcch--HHHHHHHhc
Q psy8846 428 NAHKIQ-AKIIAEAANESV--QESLERRFG 454 (568)
Q Consensus 428 na~~i~-AkiIvE~AN~~~--~~~l~~~l~ 454 (568)
....++ -.+++..|.+++ .+.|.+.|.
T Consensus 222 ~l~~mk~gailIN~arg~~vd~~aL~~aL~ 251 (330)
T 4e5n_A 222 LLALVRPGALLVNPCRGSVVDEAAVLAALE 251 (330)
T ss_dssp HHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhhCCCCcEEEECCCCchhCHHHHHHHHH
Confidence 888886 568889998775 334555443
No 37
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=82.64 E-value=1.3 Score=45.59 Aligned_cols=89 Identities=12% Similarity=0.127 Sum_probs=60.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeecc-----ccCCCChh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAA-----VEKVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaA-----l~~~It~~ 427 (568)
|++|..+|+.|...|++|++.. . +...... +. +++..+.++++ .+|||++.|. ..+.|+++
T Consensus 150 G~IG~~vA~~l~~~G~~V~~~d-~--~~~~~~~---~~-------g~~~~~l~ell-~~aDvV~l~~P~t~~t~~li~~~ 215 (334)
T 2pi1_A 150 GRIGSRVAMYGLAFGMKVLCYD-V--VKREDLK---EK-------GCVYTSLDELL-KESDVISLHVPYTKETHHMINEE 215 (334)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEC-S--SCCHHHH---HT-------TCEECCHHHHH-HHCSEEEECCCCCTTTTTCBCHH
T ss_pred CHHHHHHHHHHHHCcCEEEEEC-C--CcchhhH---hc-------CceecCHHHHH-hhCCEEEEeCCCChHHHHhhCHH
Confidence 9999999999999999999843 2 2222111 11 34444444555 4799999874 45688888
Q ss_pred hHhccc-ceEEEecCCcch--HHHHHHHhcc
Q psy8846 428 NAHKIQ-AKIIAEAANESV--QESLERRFGN 455 (568)
Q Consensus 428 na~~i~-AkiIvE~AN~~~--~~~l~~~l~~ 455 (568)
....++ -.+++..|-+++ .+.|.+.|.+
T Consensus 216 ~l~~mk~gailIN~aRg~~vd~~aL~~aL~~ 246 (334)
T 2pi1_A 216 RISLMKDGVYLINTARGKVVDTDALYRAYQR 246 (334)
T ss_dssp HHHHSCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred HHhhCCCCcEEEECCCCcccCHHHHHHHHHh
Confidence 888887 468888888775 3345555443
No 38
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=81.38 E-value=1.4 Score=48.05 Aligned_cols=81 Identities=17% Similarity=0.143 Sum_probs=57.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeecc-ccCCCChhhHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAA-VEKVITKNNAHK 431 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaA-l~~~It~~na~~ 431 (568)
|++|..+|+.|...|++|++ .+.+.....+.... |.+..+-++++ ..|||++-|. ..+.|+.+....
T Consensus 286 G~IG~~vA~~l~~~G~~V~v---~d~~~~~~~~a~~~--------G~~~~~l~ell-~~aDiVi~~~~t~~lI~~~~l~~ 353 (494)
T 3d64_A 286 GDVGKGCAQSLRGLGATVWV---TEIDPICALQAAME--------GYRVVTMEYAA-DKADIFVTATGNYHVINHDHMKA 353 (494)
T ss_dssp SHHHHHHHHHHHTTTCEEEE---ECSCHHHHHHHHTT--------TCEECCHHHHT-TTCSEEEECSSSSCSBCHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEE---EeCChHhHHHHHHc--------CCEeCCHHHHH-hcCCEEEECCCcccccCHHHHhh
Confidence 99999999999999999988 34566543232221 33333333444 4799999994 467899988888
Q ss_pred cc-ceEEEecCCcch
Q psy8846 432 IQ-AKIIAEAANESV 445 (568)
Q Consensus 432 i~-AkiIvE~AN~~~ 445 (568)
+| -.+|+.-|-...
T Consensus 354 MK~gAilINvgrg~v 368 (494)
T 3d64_A 354 MRHNAIVCNIGHFDS 368 (494)
T ss_dssp CCTTEEEEECSSSSC
T ss_pred CCCCcEEEEcCCCcc
Confidence 87 467777777654
No 39
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=80.27 E-value=1.2 Score=39.28 Aligned_cols=104 Identities=16% Similarity=0.139 Sum_probs=60.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCccc----ccceEEeeccccCCCCh--
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMY----EPCDIFVPAAVEKVITK-- 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~----~~cDIliPaAl~~~It~-- 426 (568)
|.+|..+|+.|.+.|..|++| +.|.+.+.+..+. |.-.-+-++ +..++|. .++|+++-|.-....+.
T Consensus 16 G~~G~~la~~L~~~g~~v~vi---d~~~~~~~~~~~~-g~~~i~gd~---~~~~~l~~a~i~~ad~vi~~~~~~~~n~~~ 88 (140)
T 3fwz_A 16 GRVGSLLGEKLLASDIPLVVI---ETSRTRVDELRER-GVRAVLGNA---ANEEIMQLAHLECAKWLILTIPNGYEAGEI 88 (140)
T ss_dssp SHHHHHHHHHHHHTTCCEEEE---ESCHHHHHHHHHT-TCEEEESCT---TSHHHHHHTTGGGCSEEEECCSCHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCEEEE---ECCHHHHHHHHHc-CCCEEECCC---CCHHHHHhcCcccCCEEEEECCChHHHHHH
Confidence 999999999999999999984 4578887776553 211000011 1122332 47899887754433222
Q ss_pred -hhHhcc--cceEEEecCCcchHHHHHHHhccCCCcccccCcHH
Q psy8846 427 -NNAHKI--QAKIIAEAANESVQESLERRFGNVGGRIPVTPSES 467 (568)
Q Consensus 427 -~na~~i--~AkiIvE~AN~~~~~~l~~~l~~~GggI~vvPde~ 467 (568)
..+.++ ..++|+-.-|..-.+.|++. |-..+|.|...
T Consensus 89 ~~~a~~~~~~~~iiar~~~~~~~~~l~~~----G~d~vi~p~~~ 128 (140)
T 3fwz_A 89 VASARAKNPDIEIIARAHYDDEVAYITER----GANQVVMGERE 128 (140)
T ss_dssp HHHHHHHCSSSEEEEEESSHHHHHHHHHT----TCSEEEEHHHH
T ss_pred HHHHHHHCCCCeEEEEECCHHHHHHHHHC----CCCEEECchHH
Confidence 334444 46888877665555555543 32234456533
No 40
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=80.21 E-value=2.4 Score=44.14 Aligned_cols=90 Identities=18% Similarity=0.104 Sum_probs=58.1
Q ss_pred cCHHHHHHHHHHHCCCe-EeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeecccc-----CCCC
Q psy8846 353 GPVSMYLPQIWVQEKGK-CPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAAVE-----KVIT 425 (568)
Q Consensus 353 GnVG~~~A~~L~~~Gak-vvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaAl~-----~~It 425 (568)
|++|..+|+.|...|++ |++..-+....+.. .+. |++.+ +.++++ ..|||++.|.-. +.|+
T Consensus 173 G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~----~~~-------g~~~~~~l~ell-~~aDvV~l~~P~t~~t~~li~ 240 (364)
T 2j6i_A 173 GRIGYRVLERLVPFNPKELLYYDYQALPKDAE----EKV-------GARRVENIEELV-AQADIVTVNAPLHAGTKGLIN 240 (364)
T ss_dssp SHHHHHHHHHHGGGCCSEEEEECSSCCCHHHH----HHT-------TEEECSSHHHHH-HTCSEEEECCCCSTTTTTCBC
T ss_pred CHHHHHHHHHHHhCCCcEEEEECCCccchhHH----Hhc-------CcEecCCHHHHH-hcCCEEEECCCCChHHHHHhC
Confidence 99999999999999997 88743222222221 122 33333 223444 389999998643 6788
Q ss_pred hhhHhccc-ceEEEecCCcch--HHHHHHHhc
Q psy8846 426 KNNAHKIQ-AKIIAEAANESV--QESLERRFG 454 (568)
Q Consensus 426 ~~na~~i~-AkiIvE~AN~~~--~~~l~~~l~ 454 (568)
++....++ -.+++..|.+++ .+.|.+.|.
T Consensus 241 ~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~ 272 (364)
T 2j6i_A 241 KELLSKFKKGAWLVNTARGAICVAEDVAAALE 272 (364)
T ss_dssp HHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHHhhCCCCCEEEECCCCchhCHHHHHHHHH
Confidence 87878886 467888888774 234555443
No 41
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=80.07 E-value=4.7 Score=40.13 Aligned_cols=92 Identities=14% Similarity=0.153 Sum_probs=57.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCee-c-CCCCcccccceEEeeccccCCCChhh--
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVP-Y-EGENLMYEPCDIFVPAAVEKVITKNN-- 428 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~-i-~~~~ll~~~cDIliPaAl~~~It~~n-- 428 (568)
|++|..+|+.|.+.|.+|++ .+.+.+.+.+..+. |+.. . +.++++ .+|||++-|.-......+.
T Consensus 16 G~mG~~~a~~l~~~G~~V~~---~dr~~~~~~~~~~~--------g~~~~~~~~~e~~-~~aDvvi~~vp~~~~~~~v~~ 83 (303)
T 3g0o_A 16 GSMGMGAARSCLRAGLSTWG---ADLNPQACANLLAE--------GACGAAASAREFA-GVVDALVILVVNAAQVRQVLF 83 (303)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---ECSCHHHHHHHHHT--------TCSEEESSSTTTT-TTCSEEEECCSSHHHHHHHHC
T ss_pred CHHHHHHHHHHHHCCCeEEE---EECCHHHHHHHHHc--------CCccccCCHHHHH-hcCCEEEEECCCHHHHHHHHh
Confidence 99999999999999999887 45688877776554 2222 2 334444 4799999886543222222
Q ss_pred -----Hhcc-cceEEEecCCcch--HHHHHHHhccC
Q psy8846 429 -----AHKI-QAKIIAEAANESV--QESLERRFGNV 456 (568)
Q Consensus 429 -----a~~i-~AkiIvE~AN~~~--~~~l~~~l~~~ 456 (568)
.+.+ +-++|+..++.+. ...+.+.+.+.
T Consensus 84 ~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~ 119 (303)
T 3g0o_A 84 GEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTAL 119 (303)
T ss_dssp --CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTT
T ss_pred ChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHc
Confidence 2333 2467887777543 23444444444
No 42
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=79.73 E-value=4 Score=42.12 Aligned_cols=91 Identities=15% Similarity=0.079 Sum_probs=58.3
Q ss_pred cCHHHHHHHHHH-HCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeecc-----ccCCCC
Q psy8846 353 GPVSMYLPQIWV-QEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAA-----VEKVIT 425 (568)
Q Consensus 353 GnVG~~~A~~L~-~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaA-----l~~~It 425 (568)
|++|..+|+.|. ..|.+|++..-+.-..+... +. |.+.. +.++++ .+|||++.|. ..+.|+
T Consensus 172 G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~----~~-------g~~~~~~l~ell-~~aDvVil~vp~~~~t~~li~ 239 (348)
T 2w2k_A 172 GAIQKEIARKAVHGLGMKLVYYDVAPADAETEK----AL-------GAERVDSLEELA-RRSDCVSVSVPYMKLTHHLID 239 (348)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH----HH-------TCEECSSHHHHH-HHCSEEEECCCCSGGGTTCBC
T ss_pred CHHHHHHHHHHHHhcCCEEEEECCCCcchhhHh----hc-------CcEEeCCHHHHh-ccCCEEEEeCCCChHHHHHhh
Confidence 999999999999 99999887432222222211 11 23333 222333 4899999985 457788
Q ss_pred hhhHhccc-ceEEEecCCcch--HHHHHHHhcc
Q psy8846 426 KNNAHKIQ-AKIIAEAANESV--QESLERRFGN 455 (568)
Q Consensus 426 ~~na~~i~-AkiIvE~AN~~~--~~~l~~~l~~ 455 (568)
++..+.++ -.+|+.-+.++. .+.|.+.|.+
T Consensus 240 ~~~l~~mk~gailin~srg~~vd~~aL~~aL~~ 272 (348)
T 2w2k_A 240 EAFFAAMKPGSRIVNTARGPVISQDALIAALKS 272 (348)
T ss_dssp HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred HHHHhcCCCCCEEEECCCCchhCHHHHHHHHHh
Confidence 87777776 357788888764 3445555544
No 43
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=79.47 E-value=1.4 Score=47.81 Aligned_cols=87 Identities=13% Similarity=0.121 Sum_probs=60.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeec-cccCCCChhhHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPA-AVEKVITKNNAHK 431 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPa-Al~~~It~~na~~ 431 (568)
|++|..+|+.|...|++|++ .+.+.....+.... |.+..+-++++ ..|||++-| ...+.|+.+....
T Consensus 266 G~IG~~vA~~l~~~G~~Viv---~d~~~~~~~~a~~~--------g~~~~~l~ell-~~aDiVi~~~~t~~lI~~~~l~~ 333 (479)
T 1v8b_A 266 GDVGKGCASSMKGLGARVYI---TEIDPICAIQAVME--------GFNVVTLDEIV-DKGDFFITCTGNVDVIKLEHLLK 333 (479)
T ss_dssp SHHHHHHHHHHHHHTCEEEE---ECSCHHHHHHHHTT--------TCEECCHHHHT-TTCSEEEECCSSSSSBCHHHHTT
T ss_pred CHHHHHHHHHHHhCcCEEEE---EeCChhhHHHHHHc--------CCEecCHHHHH-hcCCEEEECCChhhhcCHHHHhh
Confidence 99999999999999999988 34566554333322 22333333444 479999999 4577899888888
Q ss_pred cc-ceEEEecCCcch--H-HHHHH
Q psy8846 432 IQ-AKIIAEAANESV--Q-ESLER 451 (568)
Q Consensus 432 i~-AkiIvE~AN~~~--~-~~l~~ 451 (568)
++ -.+|+.-+-... + +.|.+
T Consensus 334 MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 334 MKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp CCTTCEEEECSSTTTSBCHHHHHT
T ss_pred cCCCcEEEEeCCCCccccchhhhc
Confidence 87 457787777654 2 34555
No 44
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=79.32 E-value=2.4 Score=43.14 Aligned_cols=90 Identities=12% Similarity=0.041 Sum_probs=58.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeecc-----ccCCCChh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAA-----VEKVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaA-----l~~~It~~ 427 (568)
|++|..+|+.|...|++|++.. ..-+.. . ..+. |++..+.++++ ..|||++.|. ..+.|+++
T Consensus 151 G~IG~~~A~~l~~~G~~V~~~d-~~~~~~---~-~~~~-------g~~~~~l~ell-~~aDvVvl~~P~~~~t~~li~~~ 217 (313)
T 2ekl_A 151 GRIGTKVGIIANAMGMKVLAYD-ILDIRE---K-AEKI-------NAKAVSLEELL-KNSDVISLHVTVSKDAKPIIDYP 217 (313)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEC-SSCCHH---H-HHHT-------TCEECCHHHHH-HHCSEEEECCCCCTTSCCSBCHH
T ss_pred CHHHHHHHHHHHHCCCEEEEEC-CCcchh---H-HHhc-------CceecCHHHHH-hhCCEEEEeccCChHHHHhhCHH
Confidence 9999999999999999998743 322222 1 1222 33333333444 3899999886 45678887
Q ss_pred hHhccc-ceEEEecCCcch--HHHHHHHhcc
Q psy8846 428 NAHKIQ-AKIIAEAANESV--QESLERRFGN 455 (568)
Q Consensus 428 na~~i~-AkiIvE~AN~~~--~~~l~~~l~~ 455 (568)
....++ -.+++.-+-+++ .+.|.+.|.+
T Consensus 218 ~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~ 248 (313)
T 2ekl_A 218 QFELMKDNVIIVNTSRAVAVNGKALLDYIKK 248 (313)
T ss_dssp HHHHSCTTEEEEESSCGGGBCHHHHHHHHHT
T ss_pred HHhcCCCCCEEEECCCCcccCHHHHHHHHHc
Confidence 777776 467888777764 2345555544
No 45
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=79.21 E-value=1.9 Score=43.72 Aligned_cols=89 Identities=10% Similarity=0.080 Sum_probs=57.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeecc-----ccCCCChh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAA-----VEKVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaA-----l~~~It~~ 427 (568)
|++|..+|+.|...|++|+++. ...+.+. ..+. |++..+.++++ .+|||++.|. ..+.|+++
T Consensus 151 G~IG~~~A~~l~~~G~~V~~~d-~~~~~~~----~~~~-------g~~~~~l~ell-~~aDvV~l~~p~~~~t~~li~~~ 217 (307)
T 1wwk_A 151 GRIGYQVAKIANALGMNILLYD-PYPNEER----AKEV-------NGKFVDLETLL-KESDVVTIHVPLVESTYHLINEE 217 (307)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEC-SSCCHHH----HHHT-------TCEECCHHHHH-HHCSEEEECCCCSTTTTTCBCHH
T ss_pred CHHHHHHHHHHHHCCCEEEEEC-CCCChhh----Hhhc-------CccccCHHHHH-hhCCEEEEecCCChHHhhhcCHH
Confidence 9999999999999999998743 3223221 1222 33333334545 3899999885 34678877
Q ss_pred hHhccc-ceEEEecCCcch--HHHHHHHhc
Q psy8846 428 NAHKIQ-AKIIAEAANESV--QESLERRFG 454 (568)
Q Consensus 428 na~~i~-AkiIvE~AN~~~--~~~l~~~l~ 454 (568)
....++ -.+++.-+-+++ .+.|.+.|.
T Consensus 218 ~l~~mk~ga~lin~arg~~vd~~aL~~aL~ 247 (307)
T 1wwk_A 218 RLKLMKKTAILINTSRGPVVDTNALVKALK 247 (307)
T ss_dssp HHHHSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhcCCCCeEEEECCCCcccCHHHHHHHHH
Confidence 777776 467787777764 233444443
No 46
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=78.96 E-value=5 Score=41.61 Aligned_cols=90 Identities=16% Similarity=0.154 Sum_probs=60.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeecc-----ccCCCCh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAA-----VEKVITK 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaA-----l~~~It~ 426 (568)
|++|..+|+.|...|++|++..-+..+.+...+. |++.+ +.++++ ..|||++-|. ..+.|++
T Consensus 173 G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~-----------g~~~~~~l~ell-~~aDvV~l~~Plt~~t~~li~~ 240 (351)
T 3jtm_A 173 GRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKET-----------GAKFVEDLNEML-PKCDVIVINMPLTEKTRGMFNK 240 (351)
T ss_dssp SHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHH-----------CCEECSCHHHHG-GGCSEEEECSCCCTTTTTCBSH
T ss_pred CHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhC-----------CCeEcCCHHHHH-hcCCEEEECCCCCHHHHHhhcH
Confidence 9999999999999999988754333344333221 33444 223444 4799999875 3458888
Q ss_pred hhHhccc-ceEEEecCCcch--HHHHHHHhc
Q psy8846 427 NNAHKIQ-AKIIAEAANESV--QESLERRFG 454 (568)
Q Consensus 427 ~na~~i~-AkiIvE~AN~~~--~~~l~~~l~ 454 (568)
+....++ -.+++..|.+++ .+.|.+.|.
T Consensus 241 ~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 271 (351)
T 3jtm_A 241 ELIGKLKKGVLIVNNARGAIMERQAVVDAVE 271 (351)
T ss_dssp HHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHhcCCCCCEEEECcCchhhCHHHHHHHHH
Confidence 8888886 578899998875 334554443
No 47
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=78.75 E-value=2.3 Score=40.44 Aligned_cols=91 Identities=12% Similarity=0.062 Sum_probs=58.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeeccccCCCChhhHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAAVEKVITKNNAHK 431 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaAl~~~It~~na~~ 431 (568)
|++|..+|+.|.+.|..|+.+.|. +.+.+.+..++.|. ... +..+. -.+||+++-|.- .....+.+..
T Consensus 32 G~mG~~la~~l~~~g~~V~~v~~r--~~~~~~~l~~~~g~-------~~~~~~~~~-~~~aDvVilavp-~~~~~~v~~~ 100 (220)
T 4huj_A 32 GAIGSALAERFTAAQIPAIIANSR--GPASLSSVTDRFGA-------SVKAVELKD-ALQADVVILAVP-YDSIADIVTQ 100 (220)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTT--CGGGGHHHHHHHTT-------TEEECCHHH-HTTSSEEEEESC-GGGHHHHHTT
T ss_pred CHHHHHHHHHHHhCCCEEEEEECC--CHHHHHHHHHHhCC-------CcccChHHH-HhcCCEEEEeCC-hHHHHHHHHH
Confidence 999999999999999998886665 55555555554331 111 22222 257999998753 3333444444
Q ss_pred c---cceEEEecCCcc--------------hHHHHHHHhc
Q psy8846 432 I---QAKIIAEAANES--------------VQESLERRFG 454 (568)
Q Consensus 432 i---~AkiIvE~AN~~--------------~~~~l~~~l~ 454 (568)
+ +-++|+..+|+- ..+.+++.+.
T Consensus 101 l~~~~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~ 140 (220)
T 4huj_A 101 VSDWGGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVP 140 (220)
T ss_dssp CSCCTTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHST
T ss_pred hhccCCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCC
Confidence 3 457999999864 4566777654
No 48
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=78.40 E-value=1.8 Score=44.47 Aligned_cols=89 Identities=15% Similarity=0.177 Sum_probs=56.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeecccc-----CCCChh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVE-----KVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~-----~~It~~ 427 (568)
|++|+.+|+.|...|++|++.. ...+.+. ..+. |++..+.++++ .+|||++.|.-. +.|+++
T Consensus 155 G~iG~~vA~~l~~~G~~V~~~d-~~~~~~~----~~~~-------g~~~~~l~e~l-~~aDiVil~vp~~~~t~~~i~~~ 221 (333)
T 2d0i_A 155 GAIGKAIARRLIPFGVKLYYWS-RHRKVNV----EKEL-------KARYMDIDELL-EKSDIVILALPLTRDTYHIINEE 221 (333)
T ss_dssp SHHHHHHHHHHGGGTCEEEEEC-SSCCHHH----HHHH-------TEEECCHHHHH-HHCSEEEECCCCCTTTTTSBCHH
T ss_pred CHHHHHHHHHHHHCCCEEEEEC-CCcchhh----hhhc-------CceecCHHHHH-hhCCEEEEcCCCChHHHHHhCHH
Confidence 9999999999999999988743 3223211 1121 22222223333 489999988654 477776
Q ss_pred hHhcccceEEEecCCcch--HHHHHHHhc
Q psy8846 428 NAHKIQAKIIAEAANESV--QESLERRFG 454 (568)
Q Consensus 428 na~~i~AkiIvE~AN~~~--~~~l~~~l~ 454 (568)
..+.++..+++..+.++. .+.|.+.|.
T Consensus 222 ~~~~mk~gilin~srg~~vd~~aL~~aL~ 250 (333)
T 2d0i_A 222 RVKKLEGKYLVNIGRGALVDEKAVTEAIK 250 (333)
T ss_dssp HHHHTBTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhhCCCCEEEECCCCcccCHHHHHHHHH
Confidence 667776448888888775 223444443
No 49
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=78.03 E-value=2.5 Score=43.84 Aligned_cols=90 Identities=10% Similarity=0.036 Sum_probs=58.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeecc-----ccCCCCh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAA-----VEKVITK 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaA-----l~~~It~ 426 (568)
|++|+.+|+.|...|++|++.. .-.+. ... ... |++.+ +.++++ ..|||++.|. ..+.|++
T Consensus 177 G~IG~~vA~~l~~~G~~V~~~d-~~~~~-~~~---~~~-------g~~~~~~l~ell-~~aDvV~l~~P~t~~t~~li~~ 243 (347)
T 1mx3_A 177 GRVGQAVALRAKAFGFNVLFYD-PYLSD-GVE---RAL-------GLQRVSTLQDLL-FHSDCVTLHCGLNEHNHHLIND 243 (347)
T ss_dssp SHHHHHHHHHHHTTTCEEEEEC-TTSCT-THH---HHH-------TCEECSSHHHHH-HHCSEEEECCCCCTTCTTSBSH
T ss_pred CHHHHHHHHHHHHCCCEEEEEC-CCcch-hhH---hhc-------CCeecCCHHHHH-hcCCEEEEcCCCCHHHHHHhHH
Confidence 9999999999999999998743 21221 111 111 33333 334555 3799998874 4567888
Q ss_pred hhHhcccc-eEEEecCCcch--HHHHHHHhcc
Q psy8846 427 NNAHKIQA-KIIAEAANESV--QESLERRFGN 455 (568)
Q Consensus 427 ~na~~i~A-kiIvE~AN~~~--~~~l~~~l~~ 455 (568)
+....++. .+++.-|.+++ .+.|.+.|.+
T Consensus 244 ~~l~~mk~gailIN~arg~~vd~~aL~~aL~~ 275 (347)
T 1mx3_A 244 FTVKQMRQGAFLVNTARGGLVDEKALAQALKE 275 (347)
T ss_dssp HHHTTSCTTEEEEECSCTTSBCHHHHHHHHHH
T ss_pred HHHhcCCCCCEEEECCCChHHhHHHHHHHHHh
Confidence 88888874 58888888774 3345555443
No 50
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=76.28 E-value=4.6 Score=44.05 Aligned_cols=89 Identities=16% Similarity=0.147 Sum_probs=58.2
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeec-----cccCCCChh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPA-----AVEKVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPa-----Al~~~It~~ 427 (568)
|++|+.+|+.|...|++|++. |...+.+. . .+. |++..+.++++ .+|||++.| +..++|+++
T Consensus 151 G~IG~~vA~~l~~~G~~V~~~-d~~~~~~~---a-~~~-------g~~~~~l~e~~-~~aDvV~l~~P~~~~t~~~i~~~ 217 (529)
T 1ygy_A 151 GRIGQLVAQRIAAFGAYVVAY-DPYVSPAR---A-AQL-------GIELLSLDDLL-ARADFISVHLPKTPETAGLIDKE 217 (529)
T ss_dssp SHHHHHHHHHHHTTTCEEEEE-CTTSCHHH---H-HHH-------TCEECCHHHHH-HHCSEEEECCCCSTTTTTCBCHH
T ss_pred CHHHHHHHHHHHhCCCEEEEE-CCCCChhH---H-Hhc-------CcEEcCHHHHH-hcCCEEEECCCCchHHHHHhCHH
Confidence 999999999999999999874 33333222 1 122 33333333444 389999998 456788887
Q ss_pred hHhccc-ceEEEecCCcch--HHHHHHHhc
Q psy8846 428 NAHKIQ-AKIIAEAANESV--QESLERRFG 454 (568)
Q Consensus 428 na~~i~-AkiIvE~AN~~~--~~~l~~~l~ 454 (568)
..+.++ -.+|+.-|-+.. ...|.+.|.
T Consensus 218 ~~~~~k~g~ilin~arg~iv~~~aL~~al~ 247 (529)
T 1ygy_A 218 ALAKTKPGVIIVNAARGGLVDEAALADAIT 247 (529)
T ss_dssp HHTTSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred HHhCCCCCCEEEECCCCchhhHHHHHHHHH
Confidence 777786 468888877654 223444443
No 51
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=74.79 E-value=7.2 Score=37.46 Aligned_cols=90 Identities=14% Similarity=0.111 Sum_probs=57.4
Q ss_pred cCHHHHHHHHHHHCC-CeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeeccccCCCChhhHh
Q psy8846 353 GPVSMYLPQIWVQEK-GKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAAVEKVITKNNAH 430 (568)
Q Consensus 353 GnVG~~~A~~L~~~G-akvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaAl~~~It~~na~ 430 (568)
|++|..+|+.|.+.| ..|+. . +.+.+.+.+..++.| .+.. +.++.+ +||+++-|.-. ....+.+.
T Consensus 9 G~mG~~~a~~l~~~g~~~v~~-~--~r~~~~~~~~~~~~g-------~~~~~~~~~~~--~~D~vi~~v~~-~~~~~v~~ 75 (263)
T 1yqg_A 9 GNMAAAVAGGLVKQGGYRIYI-A--NRGAEKRERLEKELG-------VETSATLPELH--SDDVLILAVKP-QDMEAACK 75 (263)
T ss_dssp SHHHHHHHHHHHHHCSCEEEE-E--CSSHHHHHHHHHHTC-------CEEESSCCCCC--TTSEEEECSCH-HHHHHHHT
T ss_pred hHHHHHHHHHHHHCCCCeEEE-E--CCCHHHHHHHHHhcC-------CEEeCCHHHHh--cCCEEEEEeCc-hhHHHHHH
Confidence 999999999999999 77765 3 457777776665532 3332 344555 89999988652 22233444
Q ss_pred ccc--ceEEEecCCcchHHHHHHHhcc
Q psy8846 431 KIQ--AKIIAEAANESVQESLERRFGN 455 (568)
Q Consensus 431 ~i~--AkiIvE~AN~~~~~~l~~~l~~ 455 (568)
.+. -++|+.-+|.--.+.+.+.+.+
T Consensus 76 ~l~~~~~ivv~~~~g~~~~~l~~~~~~ 102 (263)
T 1yqg_A 76 NIRTNGALVLSVAAGLSVGTLSRYLGG 102 (263)
T ss_dssp TCCCTTCEEEECCTTCCHHHHHHHTTS
T ss_pred HhccCCCEEEEecCCCCHHHHHHHcCC
Confidence 443 4688887664333556665543
No 52
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=74.33 E-value=5.2 Score=39.55 Aligned_cols=92 Identities=8% Similarity=0.041 Sum_probs=56.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCC-CCcccccceEEeeccccCCCChhhH--
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEG-ENLMYEPCDIFVPAAVEKVITKNNA-- 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~-~~ll~~~cDIliPaAl~~~It~~na-- 429 (568)
|++|..+|+.|.+.|.+|++ .+.+.+.+.+..+. |.+..+. ++++ .+|||++-|.-...-..+..
T Consensus 12 G~mG~~~a~~l~~~G~~V~~---~d~~~~~~~~~~~~--------g~~~~~~~~~~~-~~aDvvi~~vp~~~~~~~v~~~ 79 (302)
T 2h78_A 12 GHMGAPMATNLLKAGYLLNV---FDLVQSAVDGLVAA--------GASAARSARDAV-QGADVVISMLPASQHVEGLYLD 79 (302)
T ss_dssp STTHHHHHHHHHHTTCEEEE---ECSSHHHHHHHHHT--------TCEECSSHHHHH-TTCSEEEECCSCHHHHHHHHHS
T ss_pred cHHHHHHHHHHHhCCCeEEE---EcCCHHHHHHHHHC--------CCeEcCCHHHHH-hCCCeEEEECCCHHHHHHHHcC
Confidence 99999999999999999887 35677777776554 2333221 2222 47999998864332222222
Q ss_pred -----hcc-cceEEEecCCcchH--HHHHHHhccC
Q psy8846 430 -----HKI-QAKIIAEAANESVQ--ESLERRFGNV 456 (568)
Q Consensus 430 -----~~i-~AkiIvE~AN~~~~--~~l~~~l~~~ 456 (568)
+.+ +-++|+.-.+.... +.+.+.+.+.
T Consensus 80 ~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~ 114 (302)
T 2h78_A 80 DDGLLAHIAPGTLVLECSTIAPTSARKIHAAARER 114 (302)
T ss_dssp SSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHT
T ss_pred chhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHc
Confidence 233 24677877665432 3455554444
No 53
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=74.26 E-value=3.5 Score=42.74 Aligned_cols=92 Identities=9% Similarity=0.097 Sum_probs=58.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC-CCCcccccc---eEEeeccccCCCChhh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE-GENLMYEPC---DIFVPAAVEKVITKNN 428 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~-~~~ll~~~c---DIliPaAl~~~It~~n 428 (568)
|++|..+|+.|.+.|..|++ .+.+.+.+.+..+. |+...+ .++++ .+| ||++-|--.+ ...+.
T Consensus 31 G~mG~~~A~~L~~~G~~V~v---~dr~~~~~~~l~~~--------g~~~~~s~~e~~-~~a~~~DvVi~~vp~~-~v~~v 97 (358)
T 4e21_A 31 GRMGADMVRRLRKGGHECVV---YDLNVNAVQALERE--------GIAGARSIEEFC-AKLVKPRVVWLMVPAA-VVDSM 97 (358)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---ECSCHHHHHHHHTT--------TCBCCSSHHHHH-HHSCSSCEEEECSCGG-GHHHH
T ss_pred hHHHHHHHHHHHhCCCEEEE---EeCCHHHHHHHHHC--------CCEEeCCHHHHH-hcCCCCCEEEEeCCHH-HHHHH
Confidence 99999999999999999887 45688877776544 222221 22232 356 9999885544 33333
Q ss_pred Hhc----c-cceEEEecCCcch--HHHHHHHhccCC
Q psy8846 429 AHK----I-QAKIIAEAANESV--QESLERRFGNVG 457 (568)
Q Consensus 429 a~~----i-~AkiIvE~AN~~~--~~~l~~~l~~~G 457 (568)
+.. + +-.+|+..+|... ...+.+.+...|
T Consensus 98 l~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g 133 (358)
T 4e21_A 98 LQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQG 133 (358)
T ss_dssp HHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTT
T ss_pred HHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCC
Confidence 333 3 2478999998763 233444454443
No 54
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=74.12 E-value=4.9 Score=40.09 Aligned_cols=80 Identities=14% Similarity=0.217 Sum_probs=55.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC---CCCcccccceEEeeccccCCCChhhH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE---GENLMYEPCDIFVPAAVEKVITKNNA 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~---~~~ll~~~cDIliPaAl~~~It~~na 429 (568)
|++|..+|+.|...|++|+++ +.+.+++....+ . |++.++ .++++ .+|||++-|.-.+.|+++..
T Consensus 166 G~iG~~~a~~l~~~G~~V~~~---d~~~~~~~~~~~-~-------g~~~~~~~~l~~~l-~~aDvVi~~~p~~~i~~~~~ 233 (300)
T 2rir_A 166 GRTGMTIARTFAALGANVKVG---ARSSAHLARITE-M-------GLVPFHTDELKEHV-KDIDICINTIPSMILNQTVL 233 (300)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESSHHHHHHHHH-T-------TCEEEEGGGHHHHS-TTCSEEEECCSSCCBCHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEE---ECCHHHHHHHHH-C-------CCeEEchhhHHHHh-hCCCEEEECCChhhhCHHHH
Confidence 999999999999999998873 345555443322 2 223221 12333 47999999988889998877
Q ss_pred hccc-ceEEEecCCcc
Q psy8846 430 HKIQ-AKIIAEAANES 444 (568)
Q Consensus 430 ~~i~-AkiIvE~AN~~ 444 (568)
..++ -.+|+.-|-+|
T Consensus 234 ~~mk~g~~lin~a~g~ 249 (300)
T 2rir_A 234 SSMTPKTLILDLASRP 249 (300)
T ss_dssp TTSCTTCEEEECSSTT
T ss_pred HhCCCCCEEEEEeCCC
Confidence 7775 45777777654
No 55
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=73.88 E-value=3.8 Score=42.22 Aligned_cols=89 Identities=13% Similarity=0.145 Sum_probs=57.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeecc-----ccCCCChh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAA-----VEKVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaA-----l~~~It~~ 427 (568)
|++|..+|+.|...|++|++.. ...+... ..+. |++..+.++++ .+|||++-|. ..+.|+++
T Consensus 174 G~IG~~vA~~l~~~G~~V~~~d-~~~~~~~----~~~~-------g~~~~~l~ell-~~aDvV~l~~P~t~~t~~li~~~ 240 (335)
T 2g76_A 174 GRIGREVATRMQSFGMKTIGYD-PIISPEV----SASF-------GVQQLPLEEIW-PLCDFITVHTPLLPSTTGLLNDN 240 (335)
T ss_dssp SHHHHHHHHHHHTTTCEEEEEC-SSSCHHH----HHHT-------TCEECCHHHHG-GGCSEEEECCCCCTTTTTSBCHH
T ss_pred CHHHHHHHHHHHHCCCEEEEEC-CCcchhh----hhhc-------CceeCCHHHHH-hcCCEEEEecCCCHHHHHhhCHH
Confidence 9999999999999999998843 3222211 1122 33333333444 4899999884 45678888
Q ss_pred hHhccc-ceEEEecCCcch-H-HHHHHHhc
Q psy8846 428 NAHKIQ-AKIIAEAANESV-Q-ESLERRFG 454 (568)
Q Consensus 428 na~~i~-AkiIvE~AN~~~-~-~~l~~~l~ 454 (568)
....++ -.+++.-+-+++ + +.|.+.|.
T Consensus 241 ~l~~mk~gailIN~arg~vvd~~aL~~aL~ 270 (335)
T 2g76_A 241 TFAQCKKGVRVVNCARGGIVDEGALLRALQ 270 (335)
T ss_dssp HHTTSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred HHhhCCCCcEEEECCCccccCHHHHHHHHH
Confidence 888886 467788777664 2 33444443
No 56
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=73.76 E-value=4.2 Score=39.37 Aligned_cols=81 Identities=7% Similarity=0.061 Sum_probs=54.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeeccccCCCChhhHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAAVEKVITKNNAHK 431 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaAl~~~It~~na~~ 431 (568)
|++|..+|+.|.+.|..+|.+.|. +.+.+.+..++.| .... +.++++ .+||+++-|.-...+ .+.+..
T Consensus 19 G~mG~~~a~~l~~~g~~~v~~~~~--~~~~~~~~~~~~g-------~~~~~~~~~~~-~~~Dvvi~av~~~~~-~~v~~~ 87 (266)
T 3d1l_A 19 GNLATNLAKALYRKGFRIVQVYSR--TEESARELAQKVE-------AEYTTDLAEVN-PYAKLYIVSLKDSAF-AELLQG 87 (266)
T ss_dssp SHHHHHHHHHHHHHTCCEEEEECS--SHHHHHHHHHHTT-------CEEESCGGGSC-SCCSEEEECCCHHHH-HHHHHH
T ss_pred CHHHHHHHHHHHHCCCeEEEEEeC--CHHHHHHHHHHcC-------CceeCCHHHHh-cCCCEEEEecCHHHH-HHHHHH
Confidence 999999999999999986666654 7777766655532 2222 223444 389999998766654 444444
Q ss_pred c-----cceEEEecCCcc
Q psy8846 432 I-----QAKIIAEAANES 444 (568)
Q Consensus 432 i-----~AkiIvE~AN~~ 444 (568)
+ .-++|+..+|..
T Consensus 88 l~~~~~~~~ivv~~s~~~ 105 (266)
T 3d1l_A 88 IVEGKREEALMVHTAGSI 105 (266)
T ss_dssp HHTTCCTTCEEEECCTTS
T ss_pred HHhhcCCCcEEEECCCCC
Confidence 3 346888888854
No 57
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=73.50 E-value=14 Score=35.90 Aligned_cols=99 Identities=11% Similarity=0.019 Sum_probs=59.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCCCCh--h--h
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITK--N--N 428 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~It~--~--n 428 (568)
|++|..+|+.|.+.|++|+ |.| -+.++..+..++.|. +.-+.+++ .+|||++-|.-.+.... . .
T Consensus 125 G~~g~~~a~~l~~~g~~v~-v~~--r~~~~~~~l~~~~~~-------~~~~~~~~--~~~Divi~~tp~~~~~~~~~~l~ 192 (263)
T 2d5c_A 125 GGAGRAVAFALREAGLEVW-VWN--RTPQRALALAEEFGL-------RAVPLEKA--REARLLVNATRVGLEDPSASPLP 192 (263)
T ss_dssp SHHHHHHHHHHHHTTCCEE-EEC--SSHHHHHHHHHHHTC-------EECCGGGG--GGCSEEEECSSTTTTCTTCCSSC
T ss_pred cHHHHHHHHHHHHCCCEEE-EEE--CCHHHHHHHHHHhcc-------chhhHhhc--cCCCEEEEccCCCCCCCCCCCCC
Confidence 9999999999999999654 444 466666666555432 11122334 68999998876543110 1 1
Q ss_pred Hhccc-ceEEEecCCcchHHHHHHHhccCCCcccccCc
Q psy8846 429 AHKIQ-AKIIAEAANESVQESLERRFGNVGGRIPVTPS 465 (568)
Q Consensus 429 a~~i~-AkiIvE~AN~~~~~~l~~~l~~~GggI~vvPd 465 (568)
.+.++ -++|++-+.+|....+.+.+.++| +.++|-
T Consensus 193 ~~~l~~g~~viD~~~~p~~t~l~~~a~~~g--~~~v~g 228 (263)
T 2d5c_A 193 AELFPEEGAAVDLVYRPLWTRFLREAKAKG--LKVQTG 228 (263)
T ss_dssp GGGSCSSSEEEESCCSSSSCHHHHHHHHTT--CEEECS
T ss_pred HHHcCCCCEEEEeecCCcccHHHHHHHHCc--CEEECc
Confidence 33454 358888887664322333344453 556665
No 58
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=72.57 E-value=5.4 Score=39.68 Aligned_cols=80 Identities=16% Similarity=0.221 Sum_probs=54.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCC---CCcccccceEEeeccccCCCChhhH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEG---ENLMYEPCDIFVPAAVEKVITKNNA 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~---~~ll~~~cDIliPaAl~~~It~~na 429 (568)
|++|..+|+.|...|++|+++ +-+.+++.... +. |++.++. ++++ ..|||++-|.-.+.|+++..
T Consensus 164 G~iG~~~a~~l~~~G~~V~~~---dr~~~~~~~~~-~~-------g~~~~~~~~l~~~l-~~aDvVi~~~p~~~i~~~~l 231 (293)
T 3d4o_A 164 GRVGMSVARKFAALGAKVKVG---ARESDLLARIA-EM-------GMEPFHISKAAQEL-RDVDVCINTIPALVVTANVL 231 (293)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESSHHHHHHHH-HT-------TSEEEEGGGHHHHT-TTCSEEEECCSSCCBCHHHH
T ss_pred CHHHHHHHHHHHhCCCEEEEE---ECCHHHHHHHH-HC-------CCeecChhhHHHHh-cCCCEEEECCChHHhCHHHH
Confidence 999999999999999998873 23455443332 22 2333221 2223 47999999987788988877
Q ss_pred hccc-ceEEEecCCcc
Q psy8846 430 HKIQ-AKIIAEAANES 444 (568)
Q Consensus 430 ~~i~-AkiIvE~AN~~ 444 (568)
..++ -.+++.-+-+|
T Consensus 232 ~~mk~~~~lin~ar~~ 247 (293)
T 3d4o_A 232 AEMPSHTFVIDLASKP 247 (293)
T ss_dssp HHSCTTCEEEECSSTT
T ss_pred HhcCCCCEEEEecCCC
Confidence 7775 35777777543
No 59
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=71.98 E-value=3.9 Score=41.71 Aligned_cols=90 Identities=14% Similarity=0.114 Sum_probs=56.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccc-----cCCCChh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAV-----EKVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl-----~~~It~~ 427 (568)
|++|+.+|+.|...|.+|+++.-..-..+.+ .+. +.+..+.++++ .+|||++.|.- .+.|+++
T Consensus 164 G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~----~~~-------g~~~~~l~e~l-~~aDvVi~~vp~~~~t~~~i~~~ 231 (330)
T 2gcg_A 164 GRIGQAIARRLKPFGVQRFLYTGRQPRPEEA----AEF-------QAEFVSTPELA-AQSDFIVVACSLTPATEGLCNKD 231 (330)
T ss_dssp SHHHHHHHHHHGGGTCCEEEEESSSCCHHHH----HTT-------TCEECCHHHHH-HHCSEEEECCCCCTTTTTCBSHH
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCcchhHH----Hhc-------CceeCCHHHHH-hhCCEEEEeCCCChHHHHhhCHH
Confidence 9999999999999999988753121122221 111 33333223333 48999998863 4567766
Q ss_pred hHhccc-ceEEEecCCcch--HHHHHHHhc
Q psy8846 428 NAHKIQ-AKIIAEAANESV--QESLERRFG 454 (568)
Q Consensus 428 na~~i~-AkiIvE~AN~~~--~~~l~~~l~ 454 (568)
..+.++ -.+++..+.++. .+.|.+.|.
T Consensus 232 ~~~~mk~gailIn~srg~~v~~~aL~~aL~ 261 (330)
T 2gcg_A 232 FFQKMKETAVFINISRGDVVNQDDLYQALA 261 (330)
T ss_dssp HHHHSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhcCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 777776 357788888764 234444443
No 60
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=71.76 E-value=7.3 Score=42.36 Aligned_cols=79 Identities=16% Similarity=0.229 Sum_probs=53.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccc-cCCCChhhHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAV-EKVITKNNAHK 431 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl-~~~It~~na~~ 431 (568)
|.+|..+|+.|...||+|++ .++|...+.+.... +.+..+.++++ ..+|+++-|.- .++|+.+....
T Consensus 274 GgIG~aiA~~Laa~GA~Viv---~D~~~~~a~~Aa~~--------g~dv~~lee~~-~~aDvVi~atG~~~vl~~e~l~~ 341 (488)
T 3ond_A 274 GDVGKGCAAALKQAGARVIV---TEIDPICALQATME--------GLQVLTLEDVV-SEADIFVTTTGNKDIIMLDHMKK 341 (488)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---ECSCHHHHHHHHHT--------TCEECCGGGTT-TTCSEEEECSSCSCSBCHHHHTT
T ss_pred CHHHHHHHHHHHHCCCEEEE---EcCCHHHHHHHHHh--------CCccCCHHHHH-HhcCEEEeCCCChhhhhHHHHHh
Confidence 89999999999999999887 45677776665543 22323333433 36999887653 56788877777
Q ss_pred ccc-eEEEecCCc
Q psy8846 432 IQA-KIIAEAANE 443 (568)
Q Consensus 432 i~A-kiIvE~AN~ 443 (568)
++- -+|+..++.
T Consensus 342 mk~gaiVvNaG~~ 354 (488)
T 3ond_A 342 MKNNAIVCNIGHF 354 (488)
T ss_dssp SCTTEEEEESSST
T ss_pred cCCCeEEEEcCCC
Confidence 753 355556653
No 61
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=71.59 E-value=4 Score=40.84 Aligned_cols=80 Identities=11% Similarity=0.173 Sum_probs=51.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC-CCCcccccceEEeeccccC-----CCCh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE-GENLMYEPCDIFVPAAVEK-----VITK 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~-~~~ll~~~cDIliPaAl~~-----~It~ 426 (568)
|++|..+|+.|.+.|.+|++ .+.+.+.+.+..+. |+...+ .++++ .+|||++-|.-.. ++.+
T Consensus 18 G~mG~~~A~~l~~~G~~V~~---~dr~~~~~~~~~~~--------g~~~~~~~~e~~-~~aDvVi~~vp~~~~~~~v~~~ 85 (306)
T 3l6d_A 18 GAMGTIMAQVLLKQGKRVAI---WNRSPGKAAALVAA--------GAHLCESVKAAL-SASPATIFVLLDNHATHEVLGM 85 (306)
T ss_dssp SHHHHHHHHHHHHTTCCEEE---ECSSHHHHHHHHHH--------TCEECSSHHHHH-HHSSEEEECCSSHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHCCCEEEE---EeCCHHHHHHHHHC--------CCeecCCHHHHH-hcCCEEEEEeCCHHHHHHHhcc
Confidence 99999999999999999887 46688887776654 233322 22332 4699999875433 2321
Q ss_pred hhHh-cccceEEEecCCcc
Q psy8846 427 NNAH-KIQAKIIAEAANES 444 (568)
Q Consensus 427 ~na~-~i~AkiIvE~AN~~ 444 (568)
+.+. ..+-++|+..++..
T Consensus 86 ~~l~~~~~g~ivid~st~~ 104 (306)
T 3l6d_A 86 PGVARALAHRTIVDYTTNA 104 (306)
T ss_dssp TTHHHHTTTCEEEECCCCC
T ss_pred cchhhccCCCEEEECCCCC
Confidence 1121 22456788777754
No 62
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=71.31 E-value=5.1 Score=40.36 Aligned_cols=145 Identities=12% Similarity=0.115 Sum_probs=82.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCC-CCcccccceEEeeccccCCCChhhH--
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEG-ENLMYEPCDIFVPAAVEKVITKNNA-- 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~-~~ll~~~cDIliPaAl~~~It~~na-- 429 (568)
|++|..+|+.|.+.|.+|++ .+.+.+.+.+..+. |++..+. +++ -.+|||++-|.-......+..
T Consensus 40 G~mG~~~a~~l~~~G~~V~~---~dr~~~~~~~l~~~--------g~~~~~~~~e~-~~~aDvVi~~vp~~~~~~~v~~~ 107 (320)
T 4dll_A 40 GSMGLPMARRLCEAGYALQV---WNRTPARAASLAAL--------GATIHEQARAA-ARDADIVVSMLENGAVVQDVLFA 107 (320)
T ss_dssp TTTHHHHHHHHHHTTCEEEE---ECSCHHHHHHHHTT--------TCEEESSHHHH-HTTCSEEEECCSSHHHHHHHHTT
T ss_pred cHHHHHHHHHHHhCCCeEEE---EcCCHHHHHHHHHC--------CCEeeCCHHHH-HhcCCEEEEECCCHHHHHHHHcc
Confidence 99999999999999999887 46788887776554 3333322 222 247999998765332222222
Q ss_pred ----hcc-cceEEEecCCcch--HHHHHHHhccCCCccccc--C-------------------c-H-------HHHhh--
Q psy8846 430 ----HKI-QAKIIAEAANESV--QESLERRFGNVGGRIPVT--P-------------------S-E-------SFQKR-- 471 (568)
Q Consensus 430 ----~~i-~AkiIvE~AN~~~--~~~l~~~l~~~GggI~vv--P-------------------d-e-------~~q~~-- 471 (568)
+.+ +-++|+...+.+. .+.+.+.+.+.| +.++ | | + .+...
T Consensus 108 ~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g--~~~~~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~ 185 (320)
T 4dll_A 108 QGVAAAMKPGSLFLDMASITPREARDHAARLGALG--IAHLDTPVSGGTVGAEQGTLVIMAGGKPADFERSLPLLKVFGR 185 (320)
T ss_dssp TCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTT--CEEEECCEECHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEE
T ss_pred hhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcC--CEEEeCCCcCCHhHHhcCCeeEEeCCCHHHHHHHHHHHHhcCC
Confidence 233 3467887777543 234444444443 2211 1 1 1 11111
Q ss_pred ---ccCCCc---HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhh
Q psy8846 472 ---ISGASE---KDIVHSGLDYTMERSARAIMKTAMKYNLGHLDINAHA 514 (568)
Q Consensus 472 ---~~~~we---~e~V~~~L~~~M~~a~~~V~~~a~~~~~~~~dlR~AA 514 (568)
.+..-. ...+++-+...+..++.+.+..+++.+ +|..+..
T Consensus 186 ~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G---~d~~~~~ 231 (320)
T 4dll_A 186 ATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFATKGG---ADMAKVK 231 (320)
T ss_dssp EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---CCHHHHH
T ss_pred EEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CCHHHHH
Confidence 001111 123556666667777888889999887 6665543
No 63
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=71.10 E-value=4 Score=44.41 Aligned_cols=79 Identities=14% Similarity=0.154 Sum_probs=53.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccc-cCCCChhhHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAV-EKVITKNNAHK 431 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl-~~~It~~na~~ 431 (568)
|.+|..+|+.|...|++|++ .+.+...+...+.. |++.++.++++ ..|||++-|.- .+.|+.+....
T Consensus 283 G~IG~~~A~~lka~Ga~Viv---~d~~~~~~~~A~~~--------Ga~~~~l~e~l-~~aDvVi~atgt~~~i~~~~l~~ 350 (494)
T 3ce6_A 283 GDVGKGCAEAMKGQGARVSV---TEIDPINALQAMME--------GFDVVTVEEAI-GDADIVVTATGNKDIIMLEHIKA 350 (494)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---ECSCHHHHHHHHHT--------TCEECCHHHHG-GGCSEEEECSSSSCSBCHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEE---EeCCHHHHHHHHHc--------CCEEecHHHHH-hCCCEEEECCCCHHHHHHHHHHh
Confidence 99999999999999999888 45677776555433 33333333444 47999999863 45677777777
Q ss_pred cc-ceEEEecCCc
Q psy8846 432 IQ-AKIIAEAANE 443 (568)
Q Consensus 432 i~-AkiIvE~AN~ 443 (568)
++ --+|+.-+..
T Consensus 351 mk~ggilvnvG~~ 363 (494)
T 3ce6_A 351 MKDHAILGNIGHF 363 (494)
T ss_dssp SCTTCEEEECSSS
T ss_pred cCCCcEEEEeCCC
Confidence 75 2344444443
No 64
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=71.04 E-value=4.4 Score=41.25 Aligned_cols=90 Identities=13% Similarity=0.089 Sum_probs=57.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeecc-----ccCCCCh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAA-----VEKVITK 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaA-----l~~~It~ 426 (568)
|++|..+|+.|...|++|+++.-+.-+... . .+. |++.. +.++++ ..|||++-|. ..+.|++
T Consensus 155 G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~---~-~~~-------g~~~~~~l~ell-~~aDvVil~~p~~~~t~~~i~~ 222 (320)
T 1gdh_A 155 GSIGQALAKRAQGFDMDIDYFDTHRASSSD---E-ASY-------QATFHDSLDSLL-SVSQFFSLNAPSTPETRYFFNK 222 (320)
T ss_dssp SHHHHHHHHHHHTTTCEEEEECSSCCCHHH---H-HHH-------TCEECSSHHHHH-HHCSEEEECCCCCTTTTTCBSH
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCcChhh---h-hhc-------CcEEcCCHHHHH-hhCCEEEEeccCchHHHhhcCH
Confidence 999999999999999999885420233221 1 121 33333 223444 4899999885 3467777
Q ss_pred hhHhccc-ceEEEecCCcch--HHHHHHHhc
Q psy8846 427 NNAHKIQ-AKIIAEAANESV--QESLERRFG 454 (568)
Q Consensus 427 ~na~~i~-AkiIvE~AN~~~--~~~l~~~l~ 454 (568)
+..+.++ -.+++.-+.+++ .+.|.+.|.
T Consensus 223 ~~l~~mk~gailIn~arg~~vd~~aL~~aL~ 253 (320)
T 1gdh_A 223 ATIKSLPQGAIVVNTARGDLVDNELVVAALE 253 (320)
T ss_dssp HHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 7777776 467788887764 234444443
No 65
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=70.56 E-value=6.2 Score=37.94 Aligned_cols=89 Identities=16% Similarity=0.143 Sum_probs=53.8
Q ss_pred cCHHHHHHHHHHHCCC----eEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC-CCCcccccceEEeeccccCCCChh
Q psy8846 353 GPVSMYLPQIWVQEKG----KCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE-GENLMYEPCDIFVPAAVEKVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~Ga----kvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~-~~~ll~~~cDIliPaAl~~~It~~ 427 (568)
|++|..+++.|.+.|. .|+. .+.+.+.+.+..++.| .+..+ +++.+ .+|||++-|.- .....+
T Consensus 11 G~mG~~~a~~l~~~g~~~~~~V~~---~~r~~~~~~~~~~~~g-------~~~~~~~~e~~-~~aDvVilav~-~~~~~~ 78 (247)
T 3gt0_A 11 GNMGMAMIGGMINKNIVSSNQIIC---SDLNTANLKNASEKYG-------LTTTTDNNEVA-KNADILILSIK-PDLYAS 78 (247)
T ss_dssp SHHHHHHHHHHHHTTSSCGGGEEE---ECSCHHHHHHHHHHHC-------CEECSCHHHHH-HHCSEEEECSC-TTTHHH
T ss_pred cHHHHHHHHHHHhCCCCCCCeEEE---EeCCHHHHHHHHHHhC-------CEEeCChHHHH-HhCCEEEEEeC-HHHHHH
Confidence 9999999999999997 7765 3567888877766543 22222 22333 47999999873 333333
Q ss_pred hHhcc----c-ceEEEecCCcchHHHHHHHh
Q psy8846 428 NAHKI----Q-AKIIAEAANESVQESLERRF 453 (568)
Q Consensus 428 na~~i----~-AkiIvE~AN~~~~~~l~~~l 453 (568)
.+..+ + -++|+--++.--.+.+++.+
T Consensus 79 v~~~l~~~l~~~~~vvs~~~gi~~~~l~~~~ 109 (247)
T 3gt0_A 79 IINEIKEIIKNDAIIVTIAAGKSIESTENAF 109 (247)
T ss_dssp HC---CCSSCTTCEEEECSCCSCHHHHHHHH
T ss_pred HHHHHHhhcCCCCEEEEecCCCCHHHHHHHh
Confidence 33333 2 34777555543344555554
No 66
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=70.22 E-value=5.4 Score=39.19 Aligned_cols=79 Identities=13% Similarity=0.178 Sum_probs=51.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCCCChhhHhcc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKI 432 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~It~~na~~i 432 (568)
|++|..+|+.|.+.|..|++ . +.+.+.+.+..+ .| .+..+..+.+ .+||+++-|.-... ..+.+..+
T Consensus 21 G~mG~~la~~l~~~g~~V~~-~--~r~~~~~~~~~~-~g-------~~~~~~~~~~-~~aDvVi~av~~~~-~~~v~~~l 87 (286)
T 3c24_A 21 GKMGARITRKIHDSAHHLAA-I--EIAPEGRDRLQG-MG-------IPLTDGDGWI-DEADVVVLALPDNI-IEKVAEDI 87 (286)
T ss_dssp SHHHHHHHHHHHHSSSEEEE-E--CCSHHHHHHHHH-TT-------CCCCCSSGGG-GTCSEEEECSCHHH-HHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCEEEE-E--ECCHHHHHHHHh-cC-------CCcCCHHHHh-cCCCEEEEcCCchH-HHHHHHHH
Confidence 89999999999999998876 3 346666666544 23 1112333444 48999998876554 24444433
Q ss_pred ----c-ceEEEecCCcc
Q psy8846 433 ----Q-AKIIAEAANES 444 (568)
Q Consensus 433 ----~-AkiIvE~AN~~ 444 (568)
+ -++|+..++..
T Consensus 88 ~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 88 VPRVRPGTIVLILDAAA 104 (286)
T ss_dssp GGGSCTTCEEEESCSHH
T ss_pred HHhCCCCCEEEECCCCc
Confidence 2 45888877754
No 67
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=70.11 E-value=13 Score=39.29 Aligned_cols=91 Identities=11% Similarity=0.135 Sum_probs=58.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeecc-----ccCCCCh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAA-----VEKVITK 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaA-----l~~~It~ 426 (568)
|++|..+|+.|...|++|++..-+.-..+.. .+. |++.. +.++++ ..|||++-|. ..+.|++
T Consensus 200 G~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~----~~~-------G~~~~~~l~ell-~~aDvV~l~~Plt~~t~~li~~ 267 (393)
T 2nac_A 200 GRIGLAVLRRLAPFDVHLHYTDRHRLPESVE----KEL-------NLTWHATREDMY-PVCDVVTLNCPLHPETEHMIND 267 (393)
T ss_dssp SHHHHHHHHHHGGGTCEEEEECSSCCCHHHH----HHH-------TCEECSSHHHHG-GGCSEEEECSCCCTTTTTCBSH
T ss_pred CHHHHHHHHHHHhCCCEEEEEcCCccchhhH----hhc-------CceecCCHHHHH-hcCCEEEEecCCchHHHHHhhH
Confidence 9999999999999999998853222222211 111 23322 223444 4899999874 3577888
Q ss_pred hhHhccc-ceEEEecCCcch--HHHHHHHhcc
Q psy8846 427 NNAHKIQ-AKIIAEAANESV--QESLERRFGN 455 (568)
Q Consensus 427 ~na~~i~-AkiIvE~AN~~~--~~~l~~~l~~ 455 (568)
+....++ -.+++.-|-+++ .+.|.+.|.+
T Consensus 268 ~~l~~mk~gailIN~aRG~~vde~aL~~aL~~ 299 (393)
T 2nac_A 268 ETLKLFKRGAYIVNTARGKLCDRDAVARALES 299 (393)
T ss_dssp HHHTTSCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred HHHhhCCCCCEEEECCCchHhhHHHHHHHHHc
Confidence 8888886 467888888775 2345555543
No 68
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=69.82 E-value=8.4 Score=36.65 Aligned_cols=62 Identities=11% Similarity=0.089 Sum_probs=40.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCc---cc------ccceEEeeccc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENL---MY------EPCDIFVPAAV 420 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~l---l~------~~cDIliPaAl 420 (568)
|-+|.++|+.|++.|++|+.+.++..+.+.+.+..++- .+.+..+.+++ ++ -++|+||-+|-
T Consensus 11 ~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag 81 (244)
T 1zmo_A 11 HFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN------PGTIALAEQKPERLVDATLQHGEAIDTIVSNDY 81 (244)
T ss_dssp STTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS------TTEEECCCCCGGGHHHHHGGGSSCEEEEEECCC
T ss_pred ChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh------CCCcccCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 68999999999999999988422005677776655542 12222233322 21 16899999985
No 69
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=69.14 E-value=8.3 Score=40.59 Aligned_cols=87 Identities=14% Similarity=0.119 Sum_probs=58.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeecc---------ccCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAA---------VEKV 423 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaA---------l~~~ 423 (568)
|++|+.+|+.|...|.+|++. |... ...+ .+....+.++++ ..|||++-|. ..+.
T Consensus 128 G~IG~~vA~~l~a~G~~V~~~-----d~~~-----~~~~-----~~~~~~sl~ell-~~aDiV~l~~Plt~~g~~~T~~l 191 (381)
T 3oet_A 128 GNVGSRLQTRLEALGIRTLLC-----DPPR-----AARG-----DEGDFRTLDELV-QEADVLTFHTPLYKDGPYKTLHL 191 (381)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE-----CHHH-----HHTT-----CCSCBCCHHHHH-HHCSEEEECCCCCCSSTTCCTTS
T ss_pred CHHHHHHHHHHHHCCCEEEEE-----CCCh-----HHhc-----cCcccCCHHHHH-hhCCEEEEcCcCCccccccchhh
Confidence 999999999999999999883 4322 1111 122222333444 4799998876 6678
Q ss_pred CChhhHhccc-ceEEEecCCcch--HHHHHHHhcc
Q psy8846 424 ITKNNAHKIQ-AKIIAEAANESV--QESLERRFGN 455 (568)
Q Consensus 424 It~~na~~i~-AkiIvE~AN~~~--~~~l~~~l~~ 455 (568)
|+++....++ -.+++..|-+++ .+.|.+.|.+
T Consensus 192 i~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~ 226 (381)
T 3oet_A 192 ADETLIRRLKPGAILINACRGPVVDNAALLARLNA 226 (381)
T ss_dssp BCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred cCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHh
Confidence 8888888886 568888888875 3345555443
No 70
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=67.60 E-value=15 Score=30.99 Aligned_cols=92 Identities=12% Similarity=0.094 Sum_probs=49.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcc----cccceEEeeccccCCCCh--
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLM----YEPCDIFVPAAVEKVITK-- 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll----~~~cDIliPaAl~~~It~-- 426 (568)
|.+|..+|+.|.+.|.+|+.+. .|.+.+.+.....|- .-+.+ . ....+.+ -.+||+++-|.-....+.
T Consensus 13 G~iG~~~a~~L~~~g~~v~~~d---~~~~~~~~~~~~~~~-~~~~~-d-~~~~~~l~~~~~~~~d~vi~~~~~~~~~~~~ 86 (140)
T 1lss_A 13 GRVGYTLAKSLSEKGHDIVLID---IDKDICKKASAEIDA-LVING-D-CTKIKTLEDAGIEDADMYIAVTGKEEVNLMS 86 (140)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHHCSS-EEEES-C-TTSHHHHHHTTTTTCSEEEECCSCHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCeEEEEE---CCHHHHHHHHHhcCc-EEEEc-C-CCCHHHHHHcCcccCCEEEEeeCCchHHHHH
Confidence 9999999999999999988753 366666665544331 00000 0 0011111 237999998854332221
Q ss_pred -hhHhccc-ceEEEecCCcchHHHHH
Q psy8846 427 -NNAHKIQ-AKIIAEAANESVQESLE 450 (568)
Q Consensus 427 -~na~~i~-AkiIvE~AN~~~~~~l~ 450 (568)
..+..++ .++|+-..|....+.++
T Consensus 87 ~~~~~~~~~~~ii~~~~~~~~~~~l~ 112 (140)
T 1lss_A 87 SLLAKSYGINKTIARISEIEYKDVFE 112 (140)
T ss_dssp HHHHHHTTCCCEEEECSSTTHHHHHH
T ss_pred HHHHHHcCCCEEEEEecCHhHHHHHH
Confidence 2233333 36777543333334443
No 71
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=67.55 E-value=5.6 Score=40.63 Aligned_cols=90 Identities=17% Similarity=0.118 Sum_probs=55.2
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccc-----cCCCChh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAV-----EKVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl-----~~~It~~ 427 (568)
|++|..+|+.|...|.+|+++. ..-+.+.. .+. |.+..+.++++ .+|||++-|.- .+.|+++
T Consensus 159 G~iG~~iA~~l~~~G~~V~~~d-~~~~~~~~----~~~-------g~~~~~l~~~l-~~aDvVil~vp~~~~t~~~i~~~ 225 (334)
T 2dbq_A 159 GRIGQAIAKRAKGFNMRILYYS-RTRKEEVE----REL-------NAEFKPLEDLL-RESDFVVLAVPLTRETYHLINEE 225 (334)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEC-SSCCHHHH----HHH-------CCEECCHHHHH-HHCSEEEECCCCCTTTTTCBCHH
T ss_pred CHHHHHHHHHHHhCCCEEEEEC-CCcchhhH----hhc-------CcccCCHHHHH-hhCCEEEECCCCChHHHHhhCHH
Confidence 9999999999999999988743 32232111 122 22222222333 48999988863 3566666
Q ss_pred hHhccc-ceEEEecCCcch--HHHHHHHhcc
Q psy8846 428 NAHKIQ-AKIIAEAANESV--QESLERRFGN 455 (568)
Q Consensus 428 na~~i~-AkiIvE~AN~~~--~~~l~~~l~~ 455 (568)
..+.++ -.+++.-+.++. .+.|.+.|.+
T Consensus 226 ~~~~mk~~ailIn~srg~~v~~~aL~~aL~~ 256 (334)
T 2dbq_A 226 RLKLMKKTAILINIARGKVVDTNALVKALKE 256 (334)
T ss_dssp HHHHSCTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred HHhcCCCCcEEEECCCCcccCHHHHHHHHHh
Confidence 666665 457788887764 2245444443
No 72
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=67.30 E-value=5.9 Score=40.64 Aligned_cols=66 Identities=18% Similarity=0.192 Sum_probs=47.1
Q ss_pred cCHHHHHHHHHHH-------CCCeEeEeCCC-------CCCHHHHHHHHHhcCCcccCCCCeecCCCCcc-cccceEEee
Q psy8846 353 GPVSMYLPQIWVQ-------EKGKCPGLPTH-------TRKPLALEEYKLDNGTIVGFPGAVPYEGENLM-YEPCDIFVP 417 (568)
Q Consensus 353 GnVG~~~A~~L~~-------~GakvvaVsD~-------GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll-~~~cDIliP 417 (568)
|+||+.+++.|.+ .+.+|++|+|+ ++|.+...+...+.|.+..+ . ++.++++ ..++||++=
T Consensus 13 G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~---~-~d~~e~l~~~~iDvVVe 88 (325)
T 3ing_A 13 GNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDR---A-FSGPEDLMGEAADLLVD 88 (325)
T ss_dssp SHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSS---B-CCSGGGGTTSCCSEEEE
T ss_pred cHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcc---c-CCHHHHhcCCCCCEEEE
Confidence 9999999999987 36899999998 37777776666665544322 1 1444554 457999998
Q ss_pred ccccC
Q psy8846 418 AAVEK 422 (568)
Q Consensus 418 aAl~~ 422 (568)
|.-..
T Consensus 89 ~T~~~ 93 (325)
T 3ing_A 89 CTPAS 93 (325)
T ss_dssp CCCCC
T ss_pred CCCCc
Confidence 86554
No 73
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=67.20 E-value=6.8 Score=40.63 Aligned_cols=80 Identities=11% Similarity=0.132 Sum_probs=54.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeecc-----ccCCCCh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAA-----VEKVITK 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaA-----l~~~It~ 426 (568)
|++|..+|+.|...|++|++.. .+... +...+. |++.+ +.++++ ..|||++-|. ..+.|+.
T Consensus 169 G~IG~~vA~~l~~~G~~V~~~d---~~~~~--~~~~~~-------g~~~~~~l~ell-~~aDiV~l~~Plt~~t~~li~~ 235 (352)
T 3gg9_A 169 GKIGQLVAGYGRAFGMNVLVWG---RENSK--ERARAD-------GFAVAESKDALF-EQSDVLSVHLRLNDETRSIITV 235 (352)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEC---SHHHH--HHHHHT-------TCEECSSHHHHH-HHCSEEEECCCCSTTTTTCBCH
T ss_pred CHHHHHHHHHHHhCCCEEEEEC---CCCCH--HHHHhc-------CceEeCCHHHHH-hhCCEEEEeccCcHHHHHhhCH
Confidence 9999999999999999999843 22211 111121 34444 333444 4799998875 3567888
Q ss_pred hhHhccc-ceEEEecCCcch
Q psy8846 427 NNAHKIQ-AKIIAEAANESV 445 (568)
Q Consensus 427 ~na~~i~-AkiIvE~AN~~~ 445 (568)
+....++ -.+++..|.+++
T Consensus 236 ~~l~~mk~gailIN~aRg~~ 255 (352)
T 3gg9_A 236 ADLTRMKPTALFVNTSRAEL 255 (352)
T ss_dssp HHHTTSCTTCEEEECSCGGG
T ss_pred HHHhhCCCCcEEEECCCchh
Confidence 8888886 568888888775
No 74
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=66.53 E-value=3.9 Score=40.24 Aligned_cols=147 Identities=13% Similarity=0.074 Sum_probs=82.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCC-CCcccccceEEeeccccCCCChhhH--
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEG-ENLMYEPCDIFVPAAVEKVITKNNA-- 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~-~~ll~~~cDIliPaAl~~~It~~na-- 429 (568)
|++|..+|+.|.+.|.+|++ .+.+.+.+.+..+. |++..+. ++++ .+|||++-|.-......+.+
T Consensus 10 G~mG~~~a~~l~~~G~~V~~---~dr~~~~~~~~~~~--------g~~~~~~~~~~~-~~advvi~~v~~~~~~~~v~~~ 77 (287)
T 3pdu_A 10 GIMGGPMAANLVRAGFDVTV---WNRNPAKCAPLVAL--------GARQASSPAEVC-AACDITIAMLADPAAAREVCFG 77 (287)
T ss_dssp STTHHHHHHHHHHHTCCEEE---ECSSGGGGHHHHHH--------TCEECSCHHHHH-HHCSEEEECCSSHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHCCCeEEE---EcCCHHHHHHHHHC--------CCeecCCHHHHH-HcCCEEEEEcCCHHHHHHHHcC
Confidence 99999999999999999877 34566666555544 3333322 2222 47999998865442222222
Q ss_pred -----hcc-cceEEEecCCcch--HHHHHHHhccCCCccccc--C-------------------c-HH---HHhh---cc
Q psy8846 430 -----HKI-QAKIIAEAANESV--QESLERRFGNVGGRIPVT--P-------------------S-ES---FQKR---IS 473 (568)
Q Consensus 430 -----~~i-~AkiIvE~AN~~~--~~~l~~~l~~~GggI~vv--P-------------------d-e~---~q~~---~~ 473 (568)
+.+ +-++|+..++... ...+.+.+.+.| +.++ | | +. ++.. .+
T Consensus 78 ~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g--~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g 155 (287)
T 3pdu_A 78 ANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARG--GRFLEAPVSGTKKPAEDGTLIILAAGDQSLFTDAGPAFAALG 155 (287)
T ss_dssp TTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTT--CEEEECCEECCHHHHHHTCEEEEEEECHHHHHHTHHHHHHHE
T ss_pred chhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcC--CEEEECCccCCHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhC
Confidence 333 3467777777543 233444444333 2111 1 1 11 1111 00
Q ss_pred ------CCCc----HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhhhh
Q psy8846 474 ------GASE----KDIVHSGLDYTMERSARAIMKTAMKYNLGHLDINAHACV 516 (568)
Q Consensus 474 ------~~we----~e~V~~~L~~~M~~a~~~V~~~a~~~~~~~~dlR~AAyi 516 (568)
+... ...+++.+...+..++.+....+++.+ +|..+..-+
T Consensus 156 ~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G---~~~~~~~~~ 205 (287)
T 3pdu_A 156 KKCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALGRNCG---LDGGQLLEV 205 (287)
T ss_dssp EEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CCHHHHHHH
T ss_pred CCEEEcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CCHHHHHHH
Confidence 1111 223556666677778888889999988 676665433
No 75
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=66.44 E-value=6.9 Score=42.14 Aligned_cols=152 Identities=17% Similarity=0.129 Sum_probs=87.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccc--cceEEeeccccCCCChhhH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYE--PCDIFVPAAVEKVITKNNA 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~--~cDIliPaAl~~~It~~na 429 (568)
|++|..+|+.|.+.|.+|++ .+.+.+.+.+..++.+ + .+.... +.+++... +||+++-|--.+....+.+
T Consensus 24 G~MG~~lA~~La~~G~~V~v---~~r~~~~~~~l~~~~~---~-~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl 96 (480)
T 2zyd_A 24 AVMGRNLALNIESRGYTVSI---FNRSREKTEEVIAENP---G-KKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAI 96 (480)
T ss_dssp SHHHHHHHHHHHTTTCCEEE---ECSSHHHHHHHHHHST---T-SCEEECSSHHHHHHTBCSSCEEEECSCSSSHHHHHH
T ss_pred HHHHHHHHHHHHhCCCeEEE---EeCCHHHHHHHHhhCC---C-CCeEEeCCHHHHHhCCCCCCEEEEECCCHHHHHHHH
Confidence 99999999999999998876 4567787777766532 1 123222 22233332 4999998765543334443
Q ss_pred h----ccc-ceEEEecCCcchH--HHHHHHhccCCCcc---c-------------ccC--c----HHHHhh---ccC---
Q psy8846 430 H----KIQ-AKIIAEAANESVQ--ESLERRFGNVGGRI---P-------------VTP--S----ESFQKR---ISG--- 474 (568)
Q Consensus 430 ~----~i~-AkiIvE~AN~~~~--~~l~~~l~~~GggI---~-------------vvP--d----e~~q~~---~~~--- 474 (568)
. .++ -.+|+..+|.... ..+.+.+.+.|..+ . +++ + +.++.. .+.
T Consensus 97 ~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~ll~~~g~~~~ 176 (480)
T 2zyd_A 97 DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAE 176 (480)
T ss_dssp HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEEEEESCHHHHHHHHHHHHHHSCBCT
T ss_pred HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCccccCHhHHhcCCeEEecCCHHHHHHHHHHHHHHhcccc
Confidence 3 343 4799999997632 33444444332110 0 111 1 111111 111
Q ss_pred ------CC--------cHHHHHHHHHHHHHHHHHHHHHHHHh-ccCCCCChhhhh
Q psy8846 475 ------AS--------EKDIVHSGLDYTMERSARAIMKTAMK-YNLGHLDINAHA 514 (568)
Q Consensus 475 ------~w--------e~e~V~~~L~~~M~~a~~~V~~~a~~-~~~~~~dlR~AA 514 (568)
.| -...+++.+...+.+++.+.+..+++ .+ +|..+..
T Consensus 177 dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lG---l~~~~~~ 228 (480)
T 2zyd_A 177 DGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLN---LTNEELA 228 (480)
T ss_dssp TSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCHHHHH
T ss_pred CCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCHHHHH
Confidence 11 12236777788888899999988988 57 5665543
No 76
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=66.28 E-value=11 Score=36.77 Aligned_cols=90 Identities=14% Similarity=0.072 Sum_probs=54.9
Q ss_pred cCHHHHHHHHHHHC--CCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeeccccCCCChhhH
Q psy8846 353 GPVSMYLPQIWVQE--KGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAAVEKVITKNNA 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~--GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaAl~~~It~~na 429 (568)
|++|..+|+.|.+. |..|++ .+.+.+.+....+ .|... ... +.++.+ .+||+++-|.-...+ .+.+
T Consensus 15 G~mG~~~a~~l~~~g~~~~V~~---~d~~~~~~~~~~~-~g~~~-----~~~~~~~~~~-~~aDvVilavp~~~~-~~v~ 83 (290)
T 3b1f_A 15 GLIGASLALGIKRDHPHYKIVG---YNRSDRSRDIALE-RGIVD-----EATADFKVFA-ALADVIILAVPIKKT-IDFI 83 (290)
T ss_dssp SHHHHHHHHHHHHHCTTSEEEE---ECSSHHHHHHHHH-TTSCS-----EEESCTTTTG-GGCSEEEECSCHHHH-HHHH
T ss_pred CHHHHHHHHHHHhCCCCcEEEE---EcCCHHHHHHHHH-cCCcc-----cccCCHHHhh-cCCCEEEEcCCHHHH-HHHH
Confidence 99999999999987 567665 3456776665543 33210 122 334444 489999998765544 3333
Q ss_pred hc-----cc-ceEEEecCCcch--HHHHHHHh
Q psy8846 430 HK-----IQ-AKIIAEAANESV--QESLERRF 453 (568)
Q Consensus 430 ~~-----i~-AkiIvE~AN~~~--~~~l~~~l 453 (568)
.. ++ -.+|+..+|... .+.+.+.+
T Consensus 84 ~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l 115 (290)
T 3b1f_A 84 KILADLDLKEDVIITDAGSTKYEIVRAAEYYL 115 (290)
T ss_dssp HHHHTSCCCTTCEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCEEEECCCCchHHHHHHHHhc
Confidence 33 32 358888888654 24444444
No 77
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=65.43 E-value=15 Score=36.91 Aligned_cols=84 Identities=10% Similarity=0.072 Sum_probs=52.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCC----CeecC-CCCcccccceEEeeccccCCCChh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPG----AVPYE-GENLMYEPCDIFVPAAVEKVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~g----a~~i~-~~~ll~~~cDIliPaAl~~~It~~ 427 (568)
|++|+.+|..|++.|..|+.+ +.+.+.+....++...+ ..|+ ....+ +++ ..+||+++-|-- ..-..+
T Consensus 23 G~mG~ala~~L~~~G~~V~~~---~r~~~~~~~l~~~g~~~-~~~~~~~~~~~~~~~~~--~~~aDvVil~vk-~~~~~~ 95 (335)
T 1z82_A 23 GSWGTVFAQMLHENGEEVILW---ARRKEIVDLINVSHTSP-YVEESKITVRATNDLEE--IKKEDILVIAIP-VQYIRE 95 (335)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---CSSHHHHHHHHHHSCBT-TBTTCCCCSEEESCGGG--CCTTEEEEECSC-GGGHHH
T ss_pred CHHHHHHHHHHHhCCCeEEEE---eCCHHHHHHHHHhCCcc-cCCCCeeeEEEeCCHHH--hcCCCEEEEECC-HHHHHH
Confidence 999999999999999988763 45666666665543222 1122 23332 223 347999988754 344445
Q ss_pred hHhccc--ceEEEecCCc
Q psy8846 428 NAHKIQ--AKIIAEAANE 443 (568)
Q Consensus 428 na~~i~--AkiIvE~AN~ 443 (568)
-+..+. -++|+.-+|+
T Consensus 96 v~~~l~~~~~~vv~~~nG 113 (335)
T 1z82_A 96 HLLRLPVKPSMVLNLSKG 113 (335)
T ss_dssp HHTTCSSCCSEEEECCCC
T ss_pred HHHHhCcCCCEEEEEeCC
Confidence 555553 4678888873
No 78
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=64.98 E-value=33 Score=33.52 Aligned_cols=84 Identities=12% Similarity=-0.030 Sum_probs=51.2
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCC------CCh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKV------ITK 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~------It~ 426 (568)
|.+|..+|+.|.+.|++|+. .+.+.+++.+..++.+.. ......+.+++-+..+||+|-|+--+. |..
T Consensus 128 Gg~g~a~a~~L~~~G~~V~v---~~R~~~~~~~la~~~~~~---~~~~~~~~~~~~~~~~DivVn~t~~~~~~~~~~i~~ 201 (271)
T 1nyt_A 128 GGASRGVLLPLLSLDCAVTI---TNRTVSRAEELAKLFAHT---GSIQALSMDELEGHEFDLIINATSSGISGDIPAIPS 201 (271)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---ECSSHHHHHHHHHHTGGG---SSEEECCSGGGTTCCCSEEEECCSCGGGTCCCCCCG
T ss_pred cHHHHHHHHHHHHcCCEEEE---EECCHHHHHHHHHHhhcc---CCeeEecHHHhccCCCCEEEECCCCCCCCCCCCCCH
Confidence 88999999999999998776 346777776666553220 011111212221147999999885432 222
Q ss_pred hhHhcc-cceEEEecCCcch
Q psy8846 427 NNAHKI-QAKIIAEAANESV 445 (568)
Q Consensus 427 ~na~~i-~AkiIvE~AN~~~ 445 (568)
+. + ...+|++-..+|.
T Consensus 202 ~~---l~~~~~v~D~~y~p~ 218 (271)
T 1nyt_A 202 SL---IHPGIYCYDMFYQKG 218 (271)
T ss_dssp GG---CCTTCEEEESCCCSS
T ss_pred HH---cCCCCEEEEeccCCc
Confidence 21 2 2467888877774
No 79
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=64.60 E-value=8 Score=37.52 Aligned_cols=90 Identities=7% Similarity=-0.062 Sum_probs=52.2
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCCCChhhH---
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNA--- 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~It~~na--- 429 (568)
|++|..+|+.|.+ |.+|+. . +.+.+.+.+..+. | ....+.++.+ .+||+++-|.-...-..+.+
T Consensus 10 G~~G~~~a~~l~~-g~~V~~-~--~~~~~~~~~~~~~-g-------~~~~~~~~~~-~~~D~vi~~v~~~~~~~~v~~~l 76 (289)
T 2cvz_A 10 GAMGYPMAGHLAR-RFPTLV-W--NRTFEKALRHQEE-F-------GSEAVPLERV-AEARVIFTCLPTTREVYEVAEAL 76 (289)
T ss_dssp STTHHHHHHHHHT-TSCEEE-E--CSSTHHHHHHHHH-H-------CCEECCGGGG-GGCSEEEECCSSHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhC-CCeEEE-E--eCCHHHHHHHHHC-C-------CcccCHHHHH-hCCCEEEEeCCChHHHHHHHHHH
Confidence 9999999999999 998765 3 3456666555443 1 1111233444 38999998865443222222
Q ss_pred -hccc-ceEEEecCCcch--HHHHHHHhcc
Q psy8846 430 -HKIQ-AKIIAEAANESV--QESLERRFGN 455 (568)
Q Consensus 430 -~~i~-AkiIvE~AN~~~--~~~l~~~l~~ 455 (568)
+.++ -++|+.-.|... .+.+.+.+.+
T Consensus 77 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~ 106 (289)
T 2cvz_A 77 YPYLREGTYWVDATSGEPEASRRLAERLRE 106 (289)
T ss_dssp TTTCCTTEEEEECSCCCHHHHHHHHHHHHT
T ss_pred HhhCCCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 3343 357777677542 2344444443
No 80
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=64.06 E-value=5 Score=40.18 Aligned_cols=149 Identities=13% Similarity=0.116 Sum_probs=82.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC-CCCcccccceEEeeccccCCCChhhH--
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE-GENLMYEPCDIFVPAAVEKVITKNNA-- 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~-~~~ll~~~cDIliPaAl~~~It~~na-- 429 (568)
|++|..+|+.|.+.|..|++ .+.+.+.+.+..+. |++..+ .++++ .+|||++-|.-......+.+
T Consensus 30 G~mG~~~A~~l~~~G~~V~~---~dr~~~~~~~l~~~--------g~~~~~~~~~~~-~~aDvvi~~vp~~~~~~~v~~~ 97 (310)
T 3doj_A 30 GIMGKAMSMNLLKNGFKVTV---WNRTLSKCDELVEH--------GASVCESPAEVI-KKCKYTIAMLSDPCAALSVVFD 97 (310)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---ECSSGGGGHHHHHT--------TCEECSSHHHHH-HHCSEEEECCSSHHHHHHHHHS
T ss_pred cHHHHHHHHHHHHCCCeEEE---EeCCHHHHHHHHHC--------CCeEcCCHHHHH-HhCCEEEEEcCCHHHHHHHHhC
Confidence 99999999999999998877 34566666555433 333332 22333 47999998754332222222
Q ss_pred -----hcc-cceEEEecCCcch--HHHHHHHhccCCCcc------------------cccC-c----HHHHhh---cc--
Q psy8846 430 -----HKI-QAKIIAEAANESV--QESLERRFGNVGGRI------------------PVTP-S----ESFQKR---IS-- 473 (568)
Q Consensus 430 -----~~i-~AkiIvE~AN~~~--~~~l~~~l~~~GggI------------------~vvP-d----e~~q~~---~~-- 473 (568)
+.+ +-++|+.-++.+. ...+.+.+.+.|... .+++ | +.++.. .+
T Consensus 98 ~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~g~~ 177 (310)
T 3doj_A 98 KGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVSGSKKPAEDGQLIILAAGDKALFEESIPAFDVLGKR 177 (310)
T ss_dssp TTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHHHHHHHHHEEE
T ss_pred chhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEeCCCCCChhHHhcCCeEEEEcCCHHHHHHHHHHHHHhCCC
Confidence 233 3467888777543 233444444433111 0110 1 111111 00
Q ss_pred ----CCCc----HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhhhh
Q psy8846 474 ----GASE----KDIVHSGLDYTMERSARAIMKTAMKYNLGHLDINAHACV 516 (568)
Q Consensus 474 ----~~we----~e~V~~~L~~~M~~a~~~V~~~a~~~~~~~~dlR~AAyi 516 (568)
+... ...+++.+-..+..++.+....+++.+ +|..+..-+
T Consensus 178 ~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G---~d~~~~~~~ 225 (310)
T 3doj_A 178 SFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSG---LSSDTLLDI 225 (310)
T ss_dssp EEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---SCHHHHHHH
T ss_pred EEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CCHHHHHHH
Confidence 1111 124556666667777889999999988 677665433
No 81
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=64.03 E-value=4.6 Score=39.70 Aligned_cols=92 Identities=12% Similarity=0.113 Sum_probs=54.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCC-CCcccccceEEeeccccCCCChhhH--
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEG-ENLMYEPCDIFVPAAVEKVITKNNA-- 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~-~~ll~~~cDIliPaAl~~~It~~na-- 429 (568)
|++|..+|+.|.+.|.+|++ .+.+.+.+.+..+. |.+..+. ++++ .+|||++-|.-...-..+.+
T Consensus 10 G~mG~~~a~~l~~~G~~V~~---~dr~~~~~~~~~~~--------g~~~~~~~~~~~-~~aDvvi~~vp~~~~~~~v~~~ 77 (287)
T 3pef_A 10 GIMGSAMAKNLVKAGCSVTI---WNRSPEKAEELAAL--------GAERAATPCEVV-ESCPVTFAMLADPAAAEEVCFG 77 (287)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---ECSSGGGGHHHHHT--------TCEECSSHHHHH-HHCSEEEECCSSHHHHHHHHHS
T ss_pred cHHHHHHHHHHHHCCCeEEE---EcCCHHHHHHHHHC--------CCeecCCHHHHH-hcCCEEEEEcCCHHHHHHHHcC
Confidence 99999999999999999886 34566666555443 3333321 2222 47999998755332222333
Q ss_pred -----hcc-cceEEEecCCcch--HHHHHHHhccC
Q psy8846 430 -----HKI-QAKIIAEAANESV--QESLERRFGNV 456 (568)
Q Consensus 430 -----~~i-~AkiIvE~AN~~~--~~~l~~~l~~~ 456 (568)
+.+ +-++|+...+.+. ...+.+.+.+.
T Consensus 78 ~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~ 112 (287)
T 3pef_A 78 KHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAK 112 (287)
T ss_dssp TTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHT
T ss_pred cchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHh
Confidence 333 3467777777543 23344444443
No 82
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=63.92 E-value=3.7 Score=39.41 Aligned_cols=35 Identities=0% Similarity=-0.155 Sum_probs=28.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDN 390 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~ 390 (568)
|-+|.++|+.|++.|++|+. .+.+.+.+.+..++.
T Consensus 16 ~gIG~a~a~~l~~~G~~V~~---~~r~~~~~~~~~~~~ 50 (247)
T 3rwb_A 16 QGIGKAIAARLAADGATVIV---SDINAEGAKAAAASI 50 (247)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---ECSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEE---EeCCHHHHHHHHHHh
Confidence 67999999999999999987 356777777766543
No 83
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=63.63 E-value=11 Score=38.46 Aligned_cols=86 Identities=17% Similarity=0.185 Sum_probs=55.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeecc-----ccCCCChh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAA-----VEKVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaA-----l~~~It~~ 427 (568)
|++|..+|+.|...|++|++..-. .+.. +.. .++..+.++++ ..|||++.|. ..+.|+++
T Consensus 155 G~IG~~~A~~l~~~G~~V~~~d~~-~~~~-----------~~~--~~~~~~l~ell-~~aDvV~~~~p~t~~t~~li~~~ 219 (331)
T 1xdw_A 155 GRIGRVAAQIFHGMGATVIGEDVF-EIKG-----------IED--YCTQVSLDEVL-EKSDIITIHAPYIKENGAVVTRD 219 (331)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECSS-CCCS-----------CTT--TCEECCHHHHH-HHCSEEEECCCCCTTTCCSBCHH
T ss_pred CHHHHHHHHHHHHCCCEEEEECCC-ccHH-----------HHh--ccccCCHHHHH-hhCCEEEEecCCchHHHHHhCHH
Confidence 999999999999999999885422 1100 000 12222333444 3899999874 45788888
Q ss_pred hHhccc-ceEEEecCCcch--HHHHHHHh
Q psy8846 428 NAHKIQ-AKIIAEAANESV--QESLERRF 453 (568)
Q Consensus 428 na~~i~-AkiIvE~AN~~~--~~~l~~~l 453 (568)
....++ -.+++.-+-+++ .+.|.+.|
T Consensus 220 ~l~~mk~ga~lin~srg~~vd~~aL~~aL 248 (331)
T 1xdw_A 220 FLKKMKDGAILVNCARGQLVDTEAVIEAV 248 (331)
T ss_dssp HHHTSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred HHhhCCCCcEEEECCCcccccHHHHHHHH
Confidence 888887 467788887664 23444444
No 84
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=63.53 E-value=3.7 Score=40.82 Aligned_cols=143 Identities=17% Similarity=0.148 Sum_probs=83.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeeccccCCCCh----h
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAAVEKVITK----N 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaAl~~~It~----~ 427 (568)
|++|..+|+.|.+.|.+|++. +.|.+.+.+..+. |++.. +.+++.. |||++-|.-...... +
T Consensus 24 G~mG~~~A~~l~~~G~~V~~~---dr~~~~~~~~~~~--------g~~~~~~~~~~~~--aDvvi~~vp~~~~~~~v~~~ 90 (296)
T 3qha_A 24 GNMGAPMATRMTEWPGGVTVY---DIRIEAMTPLAEA--------GATLADSVADVAA--ADLIHITVLDDAQVREVVGE 90 (296)
T ss_dssp STTHHHHHHHHTTSTTCEEEE---CSSTTTSHHHHHT--------TCEECSSHHHHTT--SSEEEECCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCeEEEE---eCCHHHHHHHHHC--------CCEEcCCHHHHHh--CCEEEEECCChHHHHHHHHH
Confidence 999999999999999998773 4555555555443 33333 2345565 999998755332222 2
Q ss_pred hHhcc-cceEEEecCCcch--HHHHHHHhccCCCccccc--C-------------------c-H---HHHhh---c----
Q psy8846 428 NAHKI-QAKIIAEAANESV--QESLERRFGNVGGRIPVT--P-------------------S-E---SFQKR---I---- 472 (568)
Q Consensus 428 na~~i-~AkiIvE~AN~~~--~~~l~~~l~~~GggI~vv--P-------------------d-e---~~q~~---~---- 472 (568)
-.+.+ +-++|+..++.+. .+.+.+.+.+.| +.++ | | + .++.. .
T Consensus 91 l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g--~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~~ 168 (296)
T 3qha_A 91 LAGHAKPGTVIAIHSTISDTTAVELARDLKARD--IHIVDAPVSGGAAAAARGELATMVGADREVYERIKPAFKHWAAVV 168 (296)
T ss_dssp HHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGT--CEEEECCEESCHHHHHHTCEEEEEECCHHHHHHHHHHHHHHEEEE
T ss_pred HHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcC--CEEEeCCCcCCHHHHhcCCccEEecCCHHHHHHHHHHHHHHcCCe
Confidence 23334 2467887777543 234555555443 2211 1 1 1 11111 0
Q ss_pred ---cCCCc---HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhh
Q psy8846 473 ---SGASE---KDIVHSGLDYTMERSARAIMKTAMKYNLGHLDINAH 513 (568)
Q Consensus 473 ---~~~we---~e~V~~~L~~~M~~a~~~V~~~a~~~~~~~~dlR~A 513 (568)
+.... ...+++-+...+..++.+....+++.+ +|..+.
T Consensus 169 ~~~g~~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G---~d~~~~ 212 (296)
T 3qha_A 169 IHAGEPGAGTRMKLARNMLTFTSYAAACEAMKLAEAAG---LDLQAL 212 (296)
T ss_dssp EEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CCHHHH
T ss_pred EEcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CCHHHH
Confidence 01111 224566667777788899999999988 677776
No 85
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=63.52 E-value=5.4 Score=36.26 Aligned_cols=92 Identities=11% Similarity=0.058 Sum_probs=50.2
Q ss_pred cCHHHHHHHHHHHC-CCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcc-----cccceEEeeccccCCCCh
Q psy8846 353 GPVSMYLPQIWVQE-KGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLM-----YEPCDIFVPAAVEKVITK 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~-GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll-----~~~cDIliPaAl~~~It~ 426 (568)
|.+|..+|+.|.+. |.+|+++ +.|.+.+.......-.+... .+ ++.+.+ -.+||+++-|.-....+.
T Consensus 48 G~~G~~~a~~L~~~~g~~V~vi---d~~~~~~~~~~~~g~~~~~g-d~---~~~~~l~~~~~~~~ad~vi~~~~~~~~~~ 120 (183)
T 3c85_A 48 GRIGTGAYDELRARYGKISLGI---EIREEAAQQHRSEGRNVISG-DA---TDPDFWERILDTGHVKLVLLAMPHHQGNQ 120 (183)
T ss_dssp SHHHHHHHHHHHHHHCSCEEEE---ESCHHHHHHHHHTTCCEEEC-CT---TCHHHHHTBCSCCCCCEEEECCSSHHHHH
T ss_pred CHHHHHHHHHHHhccCCeEEEE---ECCHHHHHHHHHCCCCEEEc-CC---CCHHHHHhccCCCCCCEEEEeCCChHHHH
Confidence 99999999999999 9998885 35777776655431111100 01 111111 236899987654322222
Q ss_pred h---hHhcc--cceEEEecCCcchHHHHHH
Q psy8846 427 N---NAHKI--QAKIIAEAANESVQESLER 451 (568)
Q Consensus 427 ~---na~~i--~AkiIvE~AN~~~~~~l~~ 451 (568)
. .+..+ ..++|+-..+....+.+.+
T Consensus 121 ~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~ 150 (183)
T 3c85_A 121 TALEQLQRRNYKGQIAAIAEYPDQLEGLLE 150 (183)
T ss_dssp HHHHHHHHTTCCSEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEEECCHHHHHHHHH
Confidence 1 22332 3477776544333344443
No 86
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=63.50 E-value=9.8 Score=40.72 Aligned_cols=97 Identities=9% Similarity=-0.028 Sum_probs=60.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccc--cceEEeeccccCCCChhhH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYE--PCDIFVPAAVEKVITKNNA 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~--~cDIliPaAl~~~It~~na 429 (568)
|++|..+|+.|.+.|.+|++ .+.+.+.+.+..++.+. .+.... +.+++... +||+++-|.-.+.-..+.+
T Consensus 14 G~mG~~lA~~L~~~G~~V~v---~dr~~~~~~~l~~~~~~----~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~vl 86 (474)
T 2iz1_A 14 AVMGKNLALNVESRGYTVAI---YNRTTSKTEEVFKEHQD----KNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDATI 86 (474)
T ss_dssp SHHHHHHHHHHHHTTCCEEE---ECSSHHHHHHHHHHTTT----SCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEE---EcCCHHHHHHHHHhCcC----CCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHHH
Confidence 99999999999999998765 34577777777665420 122222 22344432 5999998865543333333
Q ss_pred ----hccc-ceEEEecCCcch--HHHHHHHhccC
Q psy8846 430 ----HKIQ-AKIIAEAANESV--QESLERRFGNV 456 (568)
Q Consensus 430 ----~~i~-AkiIvE~AN~~~--~~~l~~~l~~~ 456 (568)
+.++ -++|+..+|... ...+.+.+.+.
T Consensus 87 ~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~ 120 (474)
T 2iz1_A 87 KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADS 120 (474)
T ss_dssp HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTS
T ss_pred HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHC
Confidence 3343 468999999753 23455555544
No 87
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=63.44 E-value=5.2 Score=34.03 Aligned_cols=30 Identities=3% Similarity=-0.077 Sum_probs=23.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEE 385 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~ 385 (568)
|.+|..+++.|.+.|++|+++. .|.+.+..
T Consensus 15 G~iG~~~a~~l~~~g~~v~~~d---~~~~~~~~ 44 (144)
T 2hmt_A 15 GRFGGSIVKELHRMGHEVLAVD---INEEKVNA 44 (144)
T ss_dssp SHHHHHHHHHHHHTTCCCEEEE---SCHHHHHT
T ss_pred CHHHHHHHHHHHHCCCEEEEEe---CCHHHHHH
Confidence 9999999999999999988753 35555543
No 88
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=62.87 E-value=5 Score=43.47 Aligned_cols=149 Identities=9% Similarity=0.062 Sum_probs=87.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCee---cCCCCcccc--cceEEeeccccCCCChh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVP---YEGENLMYE--PCDIFVPAAVEKVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~---i~~~~ll~~--~cDIliPaAl~~~It~~ 427 (568)
|++|..+|+.|.+.|.+|++ .+.+.+.+.+..++.. .+... -+.+++... +||+++-|--.+....+
T Consensus 13 G~MG~~lA~~L~~~G~~V~v---~dr~~~~~~~l~~~g~-----~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~ 84 (484)
T 4gwg_A 13 AVMGQNLILNMNDHGFVVCA---FNRTVSKVDDFLANEA-----KGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVDD 84 (484)
T ss_dssp SHHHHHHHHHHHHTTCCEEE---ECSSTHHHHHHHHTTT-----TTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHHH
T ss_pred hHHHHHHHHHHHHCCCEEEE---EeCCHHHHHHHHhccc-----CCCceeccCCHHHHHhhccCCCEEEEecCChHHHHH
Confidence 99999999999999999887 4567777777665421 11111 122344432 69998877555433333
Q ss_pred h----Hhcc-cceEEEecCCcch--HHHHHHHhccCCCc----------------ccccCc------HHHHhh---ccC-
Q psy8846 428 N----AHKI-QAKIIAEAANESV--QESLERRFGNVGGR----------------IPVTPS------ESFQKR---ISG- 474 (568)
Q Consensus 428 n----a~~i-~AkiIvE~AN~~~--~~~l~~~l~~~Ggg----------------I~vvPd------e~~q~~---~~~- 474 (568)
. ++.+ +-.+|+...|... +..+.+.+...|.. -.++|. +.++.. ++.
T Consensus 85 vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~~gA~~G~~im~GG~~ea~~~v~pll~~ig~~ 164 (484)
T 4gwg_A 85 FIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGPSLMPGGNKEAWPHIKTIFQGIAAK 164 (484)
T ss_dssp HHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEEEEEECGGGHHHHHHHHHHHSCB
T ss_pred HHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCHHHHhcCCeeecCCCHHHHHHHHHHHHHhcCc
Confidence 3 3344 3579999999763 22233333333210 011111 111111 110
Q ss_pred --------CC--------cHHHHHHHHHHHHHHHHHHHHHHHHh-ccCCCCChhh
Q psy8846 475 --------AS--------EKDIVHSGLDYTMERSARAIMKTAMK-YNLGHLDINA 512 (568)
Q Consensus 475 --------~w--------e~e~V~~~L~~~M~~a~~~V~~~a~~-~~~~~~dlR~ 512 (568)
.| --..|++.++..+..++.+.+..+++ .+ +|..+
T Consensus 165 v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~~~G---ld~~~ 216 (484)
T 4gwg_A 165 VGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLG---MAQDE 216 (484)
T ss_dssp CTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC---CCHHH
T ss_pred ccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCHHH
Confidence 11 23458999999999999999999998 77 55433
No 89
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=62.52 E-value=9.3 Score=38.92 Aligned_cols=84 Identities=8% Similarity=0.071 Sum_probs=56.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCee----cCCCCcccccceEEeecc-----ccCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVP----YEGENLMYEPCDIFVPAA-----VEKV 423 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~----i~~~~ll~~~cDIliPaA-----l~~~ 423 (568)
|++|+.+|+.|...|++|++.+-+.-. . ++... .+-++++ ..|||++-|. ..+.
T Consensus 148 G~IG~~vA~~l~~~G~~V~~~dr~~~~-------------~---~~~~~~~~~~~l~ell-~~aDiV~l~~Plt~~t~~l 210 (315)
T 3pp8_A 148 GVLGAKVAESLQAWGFPLRCWSRSRKS-------------W---PGVESYVGREELRAFL-NQTRVLINLLPNTAQTVGI 210 (315)
T ss_dssp SHHHHHHHHHHHTTTCCEEEEESSCCC-------------C---TTCEEEESHHHHHHHH-HTCSEEEECCCCCGGGTTC
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCchh-------------h---hhhhhhcccCCHHHHH-hhCCEEEEecCCchhhhhh
Confidence 999999999999999999996432100 0 11111 1123344 4799998774 4678
Q ss_pred CChhhHhccc-ceEEEecCCcch--HHHHHHHh
Q psy8846 424 ITKNNAHKIQ-AKIIAEAANESV--QESLERRF 453 (568)
Q Consensus 424 It~~na~~i~-AkiIvE~AN~~~--~~~l~~~l 453 (568)
|+++....++ -.+++..|.+++ .+.|.+.|
T Consensus 211 i~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL 243 (315)
T 3pp8_A 211 INSELLDQLPDGAYVLNLARGVHVQEADLLAAL 243 (315)
T ss_dssp BSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred ccHHHHhhCCCCCEEEECCCChhhhHHHHHHHH
Confidence 8888888886 578899998875 33444444
No 90
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=62.42 E-value=6.8 Score=34.30 Aligned_cols=78 Identities=10% Similarity=0.127 Sum_probs=48.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcc--cccceEEeeccccC--CCChhh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLM--YEPCDIFVPAAVEK--VITKNN 428 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll--~~~cDIliPaAl~~--~It~~n 428 (568)
|++|..+++.|.+.|++ |.|.| .+.+++.++.++.| ......+++- -.+|||++-|.-.. .++.
T Consensus 30 G~iG~~~a~~l~~~g~~-v~v~~--r~~~~~~~~a~~~~-------~~~~~~~~~~~~~~~~Divi~at~~~~~~~~~-- 97 (144)
T 3oj0_A 30 GMLASEIAPYFSYPQYK-VTVAG--RNIDHVRAFAEKYE-------YEYVLINDIDSLIKNNDVIITATSSKTPIVEE-- 97 (144)
T ss_dssp SHHHHHHGGGCCTTTCE-EEEEE--SCHHHHHHHHHHHT-------CEEEECSCHHHHHHTCSEEEECSCCSSCSBCG--
T ss_pred CHHHHHHHHHHHhCCCE-EEEEc--CCHHHHHHHHHHhC-------CceEeecCHHHHhcCCCEEEEeCCCCCcEeeH--
Confidence 99999999999999999 66554 47777777666543 2211222222 24799999886533 3333
Q ss_pred Hhccc-ceEEEecCCc
Q psy8846 429 AHKIQ-AKIIAEAANE 443 (568)
Q Consensus 429 a~~i~-AkiIvE~AN~ 443 (568)
..++ -++|+.-++.
T Consensus 98 -~~l~~g~~vid~~~p 112 (144)
T 3oj0_A 98 -RSLMPGKLFIDLGNP 112 (144)
T ss_dssp -GGCCTTCEEEECCSS
T ss_pred -HHcCCCCEEEEccCC
Confidence 2332 4566666663
No 91
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=61.68 E-value=25 Score=37.03 Aligned_cols=138 Identities=15% Similarity=0.085 Sum_probs=75.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCccc----ccceEEeeccccCCCC---
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMY----EPCDIFVPAAVEKVIT--- 425 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~----~~cDIliPaAl~~~It--- 425 (568)
|.+|..+|+.|.+.|..|++| +.|.+.+...... |.-.-|-+++ ..++|. .+||++|-|.-....|
T Consensus 13 Gr~G~~va~~L~~~g~~vvvI---d~d~~~v~~~~~~-g~~vi~GDat---~~~~L~~agi~~A~~viv~~~~~~~n~~i 85 (413)
T 3l9w_A 13 GRFGQITGRLLLSSGVKMVVL---DHDPDHIETLRKF-GMKVFYGDAT---RMDLLESAGAAKAEVLINAIDDPQTNLQL 85 (413)
T ss_dssp SHHHHHHHHHHHHTTCCEEEE---ECCHHHHHHHHHT-TCCCEESCTT---CHHHHHHTTTTTCSEEEECCSSHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCEEEE---ECCHHHHHHHHhC-CCeEEEcCCC---CHHHHHhcCCCccCEEEECCCChHHHHHH
Confidence 999999999999999999884 4688887776643 2111111111 123332 3689988875443333
Q ss_pred hhhHhcc--cceEEEecCCcchHHHHHHHhccCCCcccccCcHHHHhh------ccCCCcHHHHHHHHHHHHHHHHHHHH
Q psy8846 426 KNNAHKI--QAKIIAEAANESVQESLERRFGNVGGRIPVTPSESFQKR------ISGASEKDIVHSGLDYTMERSARAIM 497 (568)
Q Consensus 426 ~~na~~i--~AkiIvE~AN~~~~~~l~~~l~~~GggI~vvPde~~q~~------~~~~we~e~V~~~L~~~M~~a~~~V~ 497 (568)
...+.++ ..+||+-+-|..-...|.+. |-..+|-|.+..-.. ...--+.+++.+.++..-..-++.+.
T Consensus 86 ~~~ar~~~p~~~Iiara~~~~~~~~L~~~----Gad~Vi~~~~~~a~~la~~~L~~lg~~~~~~~~~~~~~r~~~~~~~~ 161 (413)
T 3l9w_A 86 TEMVKEHFPHLQIIARARDVDHYIRLRQA----GVEKPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVE 161 (413)
T ss_dssp HHHHHHHCTTCEEEEEESSHHHHHHHHHT----TCSSCEETTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCeEEEEECCHHHHHHHHHC----CCCEEECccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhHHHHHH
Confidence 2223333 35899988776555555543 322334455333211 11123455566666554444444444
Q ss_pred HHHH
Q psy8846 498 KTAM 501 (568)
Q Consensus 498 ~~a~ 501 (568)
+.+.
T Consensus 162 ~~~~ 165 (413)
T 3l9w_A 162 EMAM 165 (413)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 4433
No 92
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=61.38 E-value=14 Score=38.51 Aligned_cols=88 Identities=13% Similarity=0.152 Sum_probs=56.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeecc-----ccCCCChh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAA-----VEKVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaA-----l~~~It~~ 427 (568)
|++|..+|+.|...|++|++..-+ .+.+.. ... |++..+.++++ ..|||++-|. ..+.|+.+
T Consensus 185 G~IG~~vA~~l~~fG~~V~~~d~~-~~~~~~----~~~-------g~~~~~l~ell-~~aDvV~l~~Plt~~T~~li~~~ 251 (365)
T 4hy3_A 185 GDLGKALRRVLSGFRARIRVFDPW-LPRSML----EEN-------GVEPASLEDVL-TKSDFIFVVAAVTSENKRFLGAE 251 (365)
T ss_dssp SHHHHHHHHHHTTSCCEEEEECSS-SCHHHH----HHT-------TCEECCHHHHH-HSCSEEEECSCSSCC---CCCHH
T ss_pred CcccHHHHHhhhhCCCEEEEECCC-CCHHHH----hhc-------CeeeCCHHHHH-hcCCEEEEcCcCCHHHHhhcCHH
Confidence 999999999999999999985422 232221 111 33433334444 4799999764 35578888
Q ss_pred hHhccc-ceEEEecCCcch--HHHHHHHh
Q psy8846 428 NAHKIQ-AKIIAEAANESV--QESLERRF 453 (568)
Q Consensus 428 na~~i~-AkiIvE~AN~~~--~~~l~~~l 453 (568)
....++ -.+++.-|-+++ .+.|.+.|
T Consensus 252 ~l~~mk~gailIN~aRG~~vde~aL~~aL 280 (365)
T 4hy3_A 252 AFSSMRRGAAFILLSRADVVDFDALMAAV 280 (365)
T ss_dssp HHHTSCTTCEEEECSCGGGSCHHHHHHHH
T ss_pred HHhcCCCCcEEEECcCCchhCHHHHHHHH
Confidence 888886 468888888775 33444444
No 93
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=61.12 E-value=17 Score=37.57 Aligned_cols=87 Identities=14% Similarity=0.139 Sum_probs=59.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeecc-----ccCCCCh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAA-----VEKVITK 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaA-----l~~~It~ 426 (568)
|++|+.+|+.|...|++|++..-+..+.+.. . +++.+ +.++++ ..|||++-|. ..+.|++
T Consensus 182 G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-----~--------g~~~~~~l~ell-~~sDvV~l~~Plt~~T~~li~~ 247 (345)
T 4g2n_A 182 GRIGRAIATRARGFGLAIHYHNRTRLSHALE-----E--------GAIYHDTLDSLL-GASDIFLIAAPGRPELKGFLDH 247 (345)
T ss_dssp SHHHHHHHHHHHTTTCEEEEECSSCCCHHHH-----T--------TCEECSSHHHHH-HTCSEEEECSCCCGGGTTCBCH
T ss_pred ChhHHHHHHHHHHCCCEEEEECCCCcchhhh-----c--------CCeEeCCHHHHH-hhCCEEEEecCCCHHHHHHhCH
Confidence 9999999999999999999854333332210 0 34444 333444 4799998775 3478888
Q ss_pred hhHhccc-ceEEEecCCcch--HHHHHHHh
Q psy8846 427 NNAHKIQ-AKIIAEAANESV--QESLERRF 453 (568)
Q Consensus 427 ~na~~i~-AkiIvE~AN~~~--~~~l~~~l 453 (568)
+....++ -.+++..|.+++ .+.|.+.|
T Consensus 248 ~~l~~mk~gailIN~aRG~~vde~aL~~aL 277 (345)
T 4g2n_A 248 DRIAKIPEGAVVINISRGDLINDDALIEAL 277 (345)
T ss_dssp HHHHHSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred HHHhhCCCCcEEEECCCCchhCHHHHHHHH
Confidence 8888886 568899998885 23444444
No 94
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=60.60 E-value=22 Score=36.44 Aligned_cols=88 Identities=13% Similarity=0.170 Sum_probs=55.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCe-ecCCCCcccccceEEeecc-----ccCCCCh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAV-PYEGENLMYEPCDIFVPAA-----VEKVITK 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~-~i~~~~ll~~~cDIliPaA-----l~~~It~ 426 (568)
|++|+.+|+.|...|++|++..-+.- ....+.+.. ..+.++++ ..|||++-|. ..+.|+.
T Consensus 149 G~IG~~vA~~l~~~G~~V~~~dr~~~-------------~~~~~~~~~~~~~l~ell-~~aDvV~l~lPlt~~T~~li~~ 214 (324)
T 3hg7_A 149 GSIGQHIAHTGKHFGMKVLGVSRSGR-------------ERAGFDQVYQLPALNKML-AQADVIVSVLPATRETHHLFTA 214 (324)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECSSCC-------------CCTTCSEEECGGGHHHHH-HTCSEEEECCCCCSSSTTSBCT
T ss_pred CHHHHHHHHHHHhCCCEEEEEcCChH-------------HhhhhhcccccCCHHHHH-hhCCEEEEeCCCCHHHHHHhHH
Confidence 99999999999999999998542210 001111111 11222333 5899998774 3567887
Q ss_pred hhHhccc-ceEEEecCCcch--HHHHHHHhc
Q psy8846 427 NNAHKIQ-AKIIAEAANESV--QESLERRFG 454 (568)
Q Consensus 427 ~na~~i~-AkiIvE~AN~~~--~~~l~~~l~ 454 (568)
+....++ -.+++.-|-+++ .+.|.+.|.
T Consensus 215 ~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 245 (324)
T 3hg7_A 215 SRFEHCKPGAILFNVGRGNAINEGDLLTALR 245 (324)
T ss_dssp TTTTCSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHhcCCCCcEEEECCCchhhCHHHHHHHHH
Confidence 7777776 568888888775 334555543
No 95
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=60.29 E-value=4.6 Score=38.98 Aligned_cols=81 Identities=16% Similarity=0.156 Sum_probs=50.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHH--------------HHHHHHhcCCcccCCCCeecCCCCcccccceEEeec
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLA--------------LEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPA 418 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~--------------L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPa 418 (568)
|++|..+|+.|.+.|..|+. .+.+.+. +.++..+.| ....-+.++++ .+|||++-|
T Consensus 28 G~mG~alA~~L~~~G~~V~~---~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~e~~-~~aDvVila 97 (245)
T 3dtt_A 28 GTVGRTMAGALADLGHEVTI---GTRDPKATLARAEPDAMGAPPFSQWLPEHP------HVHLAAFADVA-AGAELVVNA 97 (245)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---EESCHHHHHTCC-------CCHHHHGGGST------TCEEEEHHHHH-HHCSEEEEC
T ss_pred CHHHHHHHHHHHHCCCEEEE---EeCChhhhhhhhhhhhhcchhhhHHHhhcC------ceeccCHHHHH-hcCCEEEEc
Confidence 99999999999999999877 3456665 333333321 12222223333 479999988
Q ss_pred cccCCCCh---hh-HhcccceEEEecCCc
Q psy8846 419 AVEKVITK---NN-AHKIQAKIIAEAANE 443 (568)
Q Consensus 419 Al~~~It~---~n-a~~i~AkiIvE~AN~ 443 (568)
.-...+.+ +. .+.+.-++|+..+|+
T Consensus 98 vp~~~~~~~~~~i~~~~l~g~ivi~~s~~ 126 (245)
T 3dtt_A 98 TEGASSIAALTAAGAENLAGKILVDIANP 126 (245)
T ss_dssp SCGGGHHHHHHHHCHHHHTTSEEEECCCC
T ss_pred cCcHHHHHHHHHhhhhhcCCCEEEECCCC
Confidence 65543332 11 233456799999984
No 96
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=59.98 E-value=3 Score=40.27 Aligned_cols=35 Identities=6% Similarity=-0.035 Sum_probs=28.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDN 390 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~ 390 (568)
|-+|+++|+.|++.|++|+.+ +.+.+.+.+..++.
T Consensus 18 ~gIG~~ia~~l~~~G~~V~~~---~r~~~~~~~~~~~~ 52 (259)
T 4e6p_A 18 RGIGRAFAEAYVREGATVAIA---DIDIERARQAAAEI 52 (259)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHHh
Confidence 789999999999999998874 45777777666543
No 97
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=59.95 E-value=8.6 Score=41.31 Aligned_cols=101 Identities=12% Similarity=0.042 Sum_probs=59.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccc--cceEEeeccccCCCChhhH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYE--PCDIFVPAAVEKVITKNNA 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~--~cDIliPaAl~~~It~~na 429 (568)
|++|..+|..|.+.|..|+. .+.+.+.+.+..++.|....-.+.... +.+++... +||+++-|.-.+.-..+.+
T Consensus 10 G~mG~~lA~~La~~G~~V~v---~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~vl 86 (478)
T 1pgj_A 10 GVMGANLALNIAEKGFKVAV---FNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAATDSTI 86 (478)
T ss_dssp SHHHHHHHHHHHHTTCCEEE---ECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEE---EeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHHHHHHH
Confidence 99999999999999998766 345777777776654421000011111 12244432 5999998865543233333
Q ss_pred h----ccc-ceEEEecCCcch--HHHHHHHhccC
Q psy8846 430 H----KIQ-AKIIAEAANESV--QESLERRFGNV 456 (568)
Q Consensus 430 ~----~i~-AkiIvE~AN~~~--~~~l~~~l~~~ 456 (568)
. .++ -++|+..+|... ...+.+.+.+.
T Consensus 87 ~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~ 120 (478)
T 1pgj_A 87 EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAA 120 (478)
T ss_dssp HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTT
T ss_pred HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHC
Confidence 3 343 468999999763 23344444443
No 98
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=59.70 E-value=19 Score=38.22 Aligned_cols=86 Identities=15% Similarity=0.226 Sum_probs=52.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCC-----C-------CeecCCC------Ccc---ccc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFP-----G-------AVPYEGE------NLM---YEP 411 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~-----g-------a~~i~~~------~ll---~~~ 411 (568)
|.+|..+|+.+...||+|++ .+.+..++....+..+.....+ . ++.++++ +.+ -.+
T Consensus 199 G~iG~~aa~~a~~lGa~V~v---~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l~e~l~~ 275 (405)
T 4dio_A 199 GVAGLQAIATARRLGAVVSA---TDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALVAEHIAK 275 (405)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---ECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHCCCEEEE---EcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhHHHHHhcC
Confidence 99999999999999999776 3445555555444322111110 0 0001111 011 258
Q ss_pred ceEEeeccc------cCCCChhhHhccc-ceEEEecC
Q psy8846 412 CDIFVPAAV------EKVITKNNAHKIQ-AKIIAEAA 441 (568)
Q Consensus 412 cDIliPaAl------~~~It~~na~~i~-AkiIvE~A 441 (568)
|||+|-|++ ...||++-+...+ -.+|+.-|
T Consensus 276 aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 276 QDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp CSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred CCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 999998864 2468999999886 46777665
No 99
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=59.67 E-value=24 Score=35.47 Aligned_cols=76 Identities=11% Similarity=0.130 Sum_probs=52.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeecc-----ccCCCChh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAA-----VEKVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaA-----l~~~It~~ 427 (568)
|++|..+|+.|...|++|++..-. .+ + . + + ....+.++++ ..|||++-|. ..+.|+++
T Consensus 133 G~IG~~~A~~l~~~G~~V~~~dr~-~~-~-------~-~----~--~~~~~l~ell-~~aDvV~l~~P~~~~t~~~i~~~ 195 (303)
T 1qp8_A 133 GEIGTRVGKILAALGAQVRGFSRT-PK-E-------G-P----W--RFTNSLEEAL-REARAAVCALPLNKHTRGLVKYQ 195 (303)
T ss_dssp STHHHHHHHHHHHTTCEEEEECSS-CC-C-------S-S----S--CCBSCSHHHH-TTCSEEEECCCCSTTTTTCBCHH
T ss_pred CHHHHHHHHHHHHCCCEEEEECCC-cc-c-------c-C----c--ccCCCHHHHH-hhCCEEEEeCcCchHHHHHhCHH
Confidence 999999999999999999884311 11 0 0 1 1 0111223333 4799999885 45678888
Q ss_pred hHhccc-ceEEEecCCcch
Q psy8846 428 NAHKIQ-AKIIAEAANESV 445 (568)
Q Consensus 428 na~~i~-AkiIvE~AN~~~ 445 (568)
....++ -.+++.-+.+++
T Consensus 196 ~l~~mk~gailin~srg~~ 214 (303)
T 1qp8_A 196 HLALMAEDAVFVNVGRAEV 214 (303)
T ss_dssp HHTTSCTTCEEEECSCGGG
T ss_pred HHhhCCCCCEEEECCCCcc
Confidence 888886 578898888775
No 100
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=59.66 E-value=3.4 Score=34.02 Aligned_cols=32 Identities=9% Similarity=0.070 Sum_probs=25.0
Q ss_pred cCHHHHHHHHHHHCC-CeEeEeCCCCCCHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEK-GKCPGLPTHTRKPLALEEYK 387 (568)
Q Consensus 353 GnVG~~~A~~L~~~G-akvvaVsD~GiD~~~L~~~~ 387 (568)
|.+|.++++.|.+.| .+|+++ +.+.+.+....
T Consensus 14 G~iG~~~~~~l~~~g~~~v~~~---~r~~~~~~~~~ 46 (118)
T 3ic5_A 14 GKIGQMIAALLKTSSNYSVTVA---DHDLAALAVLN 46 (118)
T ss_dssp SHHHHHHHHHHHHCSSEEEEEE---ESCHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCceEEEE---eCCHHHHHHHH
Confidence 899999999999999 777663 34677666554
No 101
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=59.48 E-value=3.2 Score=43.94 Aligned_cols=88 Identities=17% Similarity=0.169 Sum_probs=56.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCC-CC-CHHH----HHHHHHhcCCcccCCCCeecCCCCccc--ccceEEeeccccCCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTH-TR-KPLA----LEEYKLDNGTIVGFPGAVPYEGENLMY--EPCDIFVPAAVEKVI 424 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~-Gi-D~~~----L~~~~~~~g~v~~~~ga~~i~~~~ll~--~~cDIliPaAl~~~I 424 (568)
|.+|..+|+.|...|++=|.|.|+ |+ ..++ |..+++....-.+ .. ....+|.+ ..+||||=+.-.+++
T Consensus 201 GaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~--~~--~~~~~L~eav~~ADVlIG~Sap~l~ 276 (388)
T 1vl6_A 201 GAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITN--PE--RLSGDLETALEGADFFIGVSRGNIL 276 (388)
T ss_dssp SHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSC--TT--CCCSCHHHHHTTCSEEEECSCSSCS
T ss_pred CHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhh--cc--CchhhHHHHHccCCEEEEeCCCCcc
Confidence 999999999999999976667887 22 1111 2222221110001 00 01122222 258999999889999
Q ss_pred ChhhHhcccc-eEEEecCCcc
Q psy8846 425 TKNNAHKIQA-KIIAEAANES 444 (568)
Q Consensus 425 t~~na~~i~A-kiIvE~AN~~ 444 (568)
|++-+.+.+- .||.+-||+-
T Consensus 277 t~emVk~Ma~~pIIfalSNPt 297 (388)
T 1vl6_A 277 KPEWIKKMSRKPVIFALANPV 297 (388)
T ss_dssp CHHHHTTSCSSCEEEECCSSS
T ss_pred CHHHHHhcCCCCEEEEcCCCC
Confidence 9999998753 3999999954
No 102
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=59.22 E-value=14 Score=36.20 Aligned_cols=92 Identities=11% Similarity=0.170 Sum_probs=55.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC-CCCcccccceEEeeccccCCCChhh---
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE-GENLMYEPCDIFVPAAVEKVITKNN--- 428 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~-~~~ll~~~cDIliPaAl~~~It~~n--- 428 (568)
|++|..+|+.|.+.|.+|+. . +.+.+.+.+..+. |....+ .++++ .+||+++-|.-...-.++.
T Consensus 14 G~~G~~~a~~l~~~g~~V~~-~--~~~~~~~~~~~~~--------g~~~~~~~~~~~-~~~D~vi~~v~~~~~~~~~~~~ 81 (299)
T 1vpd_A 14 GIMGKPMSKNLLKAGYSLVV-S--DRNPEAIADVIAA--------GAETASTAKAIA-EQCDVIITMLPNSPHVKEVALG 81 (299)
T ss_dssp STTHHHHHHHHHHTTCEEEE-E--CSCHHHHHHHHHT--------TCEECSSHHHHH-HHCSEEEECCSSHHHHHHHHHS
T ss_pred hHHHHHHHHHHHhCCCEEEE-E--eCCHHHHHHHHHC--------CCeecCCHHHHH-hCCCEEEEECCCHHHHHHHHhC
Confidence 99999999999999998765 3 4577776665543 222221 22333 3799999886523222222
Q ss_pred ----Hhccc-ceEEEecCCcch--HHHHHHHhccC
Q psy8846 429 ----AHKIQ-AKIIAEAANESV--QESLERRFGNV 456 (568)
Q Consensus 429 ----a~~i~-AkiIvE~AN~~~--~~~l~~~l~~~ 456 (568)
.+.++ -++|+.-+|... .+.+.+.+.+.
T Consensus 82 ~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 116 (299)
T 1vpd_A 82 ENGIIEGAKPGTVLIDMSSIAPLASREISDALKAK 116 (299)
T ss_dssp TTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTT
T ss_pred cchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 23343 468888888753 34455555443
No 103
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=59.02 E-value=5.5 Score=37.41 Aligned_cols=94 Identities=10% Similarity=0.087 Sum_probs=55.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcc----cccceEEeeccccCCCC---
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLM----YEPCDIFVPAAVEKVIT--- 425 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll----~~~cDIliPaAl~~~It--- 425 (568)
|.+|+++|+.|.+.|..|++|. .|.+.+.+..++.|.-.-+.++. ..+.| -.+||+++-|.-....|
T Consensus 9 G~~G~~la~~L~~~g~~v~vid---~~~~~~~~l~~~~~~~~i~gd~~---~~~~l~~a~i~~ad~vi~~~~~d~~n~~~ 82 (218)
T 3l4b_C 9 ETTAYYLARSMLSRKYGVVIIN---KDRELCEEFAKKLKATIIHGDGS---HKEILRDAEVSKNDVVVILTPRDEVNLFI 82 (218)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEE---SCHHHHHHHHHHSSSEEEESCTT---SHHHHHHHTCCTTCEEEECCSCHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCeEEEEE---CCHHHHHHHHHHcCCeEEEcCCC---CHHHHHhcCcccCCEEEEecCCcHHHHHH
Confidence 8999999999999999998853 57877776655432110000111 11222 23799998775443332
Q ss_pred hhhHhcc--cceEEEecCCcchHHHHHHH
Q psy8846 426 KNNAHKI--QAKIIAEAANESVQESLERR 452 (568)
Q Consensus 426 ~~na~~i--~AkiIvE~AN~~~~~~l~~~ 452 (568)
...+.++ ..++|+-..|....+.|++.
T Consensus 83 ~~~a~~~~~~~~iia~~~~~~~~~~l~~~ 111 (218)
T 3l4b_C 83 AQLVMKDFGVKRVVSLVNDPGNMEIFKKM 111 (218)
T ss_dssp HHHHHHTSCCCEEEECCCSGGGHHHHHHH
T ss_pred HHHHHHHcCCCeEEEEEeCcchHHHHHHC
Confidence 2333332 24677766665555666544
No 104
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=58.52 E-value=11 Score=36.27 Aligned_cols=90 Identities=10% Similarity=0.014 Sum_probs=56.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeeccccCCCChhhHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAAVEKVITKNNAHK 431 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaAl~~~It~~na~~ 431 (568)
|++|...++.|.+.|..|. +.| .+.+.+.+..++.| .... +.++++. +||+++-|.- .....+-+..
T Consensus 12 G~mG~~~a~~l~~~g~~v~-~~~--~~~~~~~~~~~~~g-------~~~~~~~~~~~~-~~D~Vi~~v~-~~~~~~v~~~ 79 (259)
T 2ahr_A 12 GKMASAIIKGLKQTPHELI-ISG--SSLERSKEIAEQLA-------LPYAMSHQDLID-QVDLVILGIK-PQLFETVLKP 79 (259)
T ss_dssp SHHHHHHHHHHTTSSCEEE-EEC--SSHHHHHHHHHHHT-------CCBCSSHHHHHH-TCSEEEECSC-GGGHHHHHTT
T ss_pred CHHHHHHHHHHHhCCCeEE-EEC--CCHHHHHHHHHHcC-------CEeeCCHHHHHh-cCCEEEEEeC-cHhHHHHHHH
Confidence 9999999999999997654 444 47777776665543 1111 1223343 8999998865 3344555555
Q ss_pred cc-ceEEEecCCcchHHHHHHHhc
Q psy8846 432 IQ-AKIIAEAANESVQESLERRFG 454 (568)
Q Consensus 432 i~-AkiIvE~AN~~~~~~l~~~l~ 454 (568)
++ -++|++-.+.--.+.+++.+.
T Consensus 80 l~~~~~vv~~~~~~~~~~l~~~~~ 103 (259)
T 2ahr_A 80 LHFKQPIISMAAGISLQRLATFVG 103 (259)
T ss_dssp SCCCSCEEECCTTCCHHHHHHHHC
T ss_pred hccCCEEEEeCCCCCHHHHHHhcC
Confidence 53 458888876433344555443
No 105
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=57.90 E-value=3.5 Score=40.45 Aligned_cols=35 Identities=14% Similarity=-0.059 Sum_probs=28.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDN 390 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~ 390 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..++.
T Consensus 38 ~GIG~aia~~la~~G~~V~~~---~r~~~~~~~~~~~~ 72 (272)
T 4dyv_A 38 SGVGRAVAVALAGAGYGVALA---GRRLDALQETAAEI 72 (272)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEE---ECCHHHHHHHHHHh
Confidence 679999999999999999884 45777777766553
No 106
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=57.18 E-value=12 Score=36.58 Aligned_cols=90 Identities=11% Similarity=0.091 Sum_probs=53.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC-CCCcccccceEEeeccccCCCCh-----
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE-GENLMYEPCDIFVPAAVEKVITK----- 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~-~~~ll~~~cDIliPaAl~~~It~----- 426 (568)
|++|..+|+.|.+.|.+|+. . +.+.+.+.+..++ |....+ .++++ .+||+++-|.-...-..
T Consensus 13 G~~G~~~a~~l~~~g~~V~~-~--~~~~~~~~~~~~~--------g~~~~~~~~~~~-~~~D~vi~~vp~~~~~~~v~~~ 80 (301)
T 3cky_A 13 GAMGKPMAINLLKEGVTVYA-F--DLMEANVAAVVAQ--------GAQACENNQKVA-AASDIIFTSLPNAGIVETVMNG 80 (301)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-E--CSSHHHHHHHHTT--------TCEECSSHHHHH-HHCSEEEECCSSHHHHHHHHHS
T ss_pred cHHHHHHHHHHHHCCCeEEE-E--eCCHHHHHHHHHC--------CCeecCCHHHHH-hCCCEEEEECCCHHHHHHHHcC
Confidence 99999999999999998775 3 4566666655443 222222 22333 37999998863222122
Q ss_pred --hhHhccc-ceEEEecCCcc--hHHHHHHHhc
Q psy8846 427 --NNAHKIQ-AKIIAEAANES--VQESLERRFG 454 (568)
Q Consensus 427 --~na~~i~-AkiIvE~AN~~--~~~~l~~~l~ 454 (568)
+-.+.++ -++|+.-+|.. ..+.+.+.+.
T Consensus 81 ~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~ 113 (301)
T 3cky_A 81 PGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAA 113 (301)
T ss_dssp TTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHH
T ss_pred cchHhhcCCCCCEEEECCCCCHHHHHHHHHHHH
Confidence 2223343 46888888875 2334444443
No 107
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=57.01 E-value=17 Score=36.58 Aligned_cols=82 Identities=10% Similarity=-0.001 Sum_probs=51.7
Q ss_pred cCHHHHHHHHHHHCCC--eEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeeccccCCCChhhH
Q psy8846 353 GPVSMYLPQIWVQEKG--KCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAAVEKVITKNNA 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~Ga--kvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaAl~~~It~~na 429 (568)
|++|..+|+.|.+.|. +|++ .+.+.+.+....+. |-+. +.. +.+++.-.+||+++-|.-...+ .+.+
T Consensus 42 G~mG~slA~~l~~~G~~~~V~~---~dr~~~~~~~a~~~-G~~~-----~~~~~~~~~~~~~aDvVilavp~~~~-~~vl 111 (314)
T 3ggo_A 42 GFMGGSFAKSLRRSGFKGKIYG---YDINPESISKAVDL-GIID-----EGTTSIAKVEDFSPDFVMLSSPVRTF-REIA 111 (314)
T ss_dssp SHHHHHHHHHHHHTTCCSEEEE---ECSCHHHHHHHHHT-TSCS-----EEESCTTGGGGGCCSEEEECSCGGGH-HHHH
T ss_pred CHHHHHHHHHHHhCCCCCEEEE---EECCHHHHHHHHHC-CCcc-----hhcCCHHHHhhccCCEEEEeCCHHHH-HHHH
Confidence 9999999999999998 7777 45677777665443 3211 122 2334134689999998765543 3333
Q ss_pred h----ccc-ceEEEecCCcc
Q psy8846 430 H----KIQ-AKIIAEAANES 444 (568)
Q Consensus 430 ~----~i~-AkiIvE~AN~~ 444 (568)
. .++ -.+|+.-+...
T Consensus 112 ~~l~~~l~~~~iv~d~~Svk 131 (314)
T 3ggo_A 112 KKLSYILSEDATVTDQGSVK 131 (314)
T ss_dssp HHHHHHSCTTCEEEECCSCC
T ss_pred HHHhhccCCCcEEEECCCCc
Confidence 3 332 35777766543
No 108
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=56.12 E-value=13 Score=36.72 Aligned_cols=89 Identities=13% Similarity=0.073 Sum_probs=54.5
Q ss_pred cCHHHHHHHHHHHCCC---eEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC-CCCcccccceEEeeccccCCCChhh
Q psy8846 353 GPVSMYLPQIWVQEKG---KCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE-GENLMYEPCDIFVPAAVEKVITKNN 428 (568)
Q Consensus 353 GnVG~~~A~~L~~~Ga---kvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~-~~~ll~~~cDIliPaAl~~~It~~n 428 (568)
|++|..+++.|.+.|. .|+. . +.+.+.+.+..++. |.+..+ +.+.+ .+|||++-|.-... -.+.
T Consensus 12 G~mG~aia~~l~~~g~~~~~V~v-~--dr~~~~~~~l~~~~-------gi~~~~~~~~~~-~~aDvVilav~p~~-~~~v 79 (280)
T 3tri_A 12 GNMARNIVVGLIANGYDPNRICV-T--NRSLDKLDFFKEKC-------GVHTTQDNRQGA-LNADVVVLAVKPHQ-IKMV 79 (280)
T ss_dssp SHHHHHHHHHHHHTTCCGGGEEE-E--CSSSHHHHHHHHTT-------CCEEESCHHHHH-SSCSEEEECSCGGG-HHHH
T ss_pred cHHHHHHHHHHHHCCCCCCeEEE-E--eCCHHHHHHHHHHc-------CCEEeCChHHHH-hcCCeEEEEeCHHH-HHHH
Confidence 9999999999999997 5554 3 45777777776653 333332 22333 47999998874433 2333
Q ss_pred Hhc-----ccce-EEEecCCcchHHHHHHHh
Q psy8846 429 AHK-----IQAK-IIAEAANESVQESLERRF 453 (568)
Q Consensus 429 a~~-----i~Ak-iIvE~AN~~~~~~l~~~l 453 (568)
... ++.+ +|+--+++--.+.+++.+
T Consensus 80 l~~l~~~~l~~~~iiiS~~agi~~~~l~~~l 110 (280)
T 3tri_A 80 CEELKDILSETKILVISLAVGVTTPLIEKWL 110 (280)
T ss_dssp HHHHHHHHHTTTCEEEECCTTCCHHHHHHHH
T ss_pred HHHHHhhccCCCeEEEEecCCCCHHHHHHHc
Confidence 333 4444 777666644334455544
No 109
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=55.50 E-value=11 Score=36.88 Aligned_cols=87 Identities=13% Similarity=0.087 Sum_probs=49.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcC-CcccCCC-----CeecCCCCccc--ccceEEeeccccCCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNG-TIVGFPG-----AVPYEGENLMY--EPCDIFVPAAVEKVI 424 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g-~v~~~~g-----a~~i~~~~ll~--~~cDIliPaAl~~~I 424 (568)
|++|..+|..|.+.|..|+.+ +.+.+.+.+..+. | .+...++ ....+++++.. .+||+++-|.-...+
T Consensus 12 G~~G~~~a~~l~~~g~~V~~~---~r~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~~~ 87 (316)
T 2ew2_A 12 GAMGSRLGIMLHQGGNDVTLI---DQWPAHIEAIRKN-GLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTKAQQL 87 (316)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---CSCHHHHHHHHHH-CEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSCHHHH
T ss_pred CHHHHHHHHHHHhCCCcEEEE---ECCHHHHHHHHhC-CEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEeccccH
Confidence 999999999999999988773 4566666666544 3 1221111 11112223333 279999887654322
Q ss_pred ChhhHhc----cc-ceEEEecCCcc
Q psy8846 425 TKNNAHK----IQ-AKIIAEAANES 444 (568)
Q Consensus 425 t~~na~~----i~-AkiIvE~AN~~ 444 (568)
.+.+.. ++ -++|+.-.|+.
T Consensus 88 -~~v~~~l~~~l~~~~~iv~~~~g~ 111 (316)
T 2ew2_A 88 -DAMFKAIQPMITEKTYVLCLLNGL 111 (316)
T ss_dssp -HHHHHHHGGGCCTTCEEEECCSSS
T ss_pred -HHHHHHHHHhcCCCCEEEEecCCC
Confidence 333332 32 35677766643
No 110
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=55.37 E-value=3.5 Score=39.86 Aligned_cols=35 Identities=6% Similarity=-0.042 Sum_probs=28.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDN 390 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~ 390 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..++.
T Consensus 18 ~gIG~a~a~~l~~~G~~V~~~---~r~~~~~~~~~~~~ 52 (255)
T 4eso_A 18 HGMGLATVRRLVEGGAEVLLT---GRNESNIARIREEF 52 (255)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHHh
Confidence 679999999999999999884 45777777766553
No 111
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=55.20 E-value=4 Score=38.77 Aligned_cols=34 Identities=6% Similarity=-0.074 Sum_probs=27.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|-+|+++|+.|++.|++|+.+ +.+.+.+.+..++
T Consensus 24 ~gIG~~~a~~l~~~G~~V~~~---~r~~~~~~~~~~~ 57 (249)
T 3f9i_A 24 SGIGSAIARLLHKLGSKVIIS---GSNEEKLKSLGNA 57 (249)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHCCCEEEEE---cCCHHHHHHHHHH
Confidence 789999999999999999884 4577777766554
No 112
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=54.99 E-value=4.9 Score=39.47 Aligned_cols=35 Identities=6% Similarity=-0.089 Sum_probs=28.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDN 390 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~ 390 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..++.
T Consensus 39 ~gIG~aia~~la~~G~~V~~~---~r~~~~~~~~~~~~ 73 (277)
T 3gvc_A 39 AGIGLAVARRLADEGCHVLCA---DIDGDAADAAATKI 73 (277)
T ss_dssp STHHHHHHHHHHHTTCEEEEE---ESSHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHHc
Confidence 789999999999999999884 46777777665543
No 113
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=54.83 E-value=18 Score=37.34 Aligned_cols=86 Identities=12% Similarity=0.171 Sum_probs=57.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccc-----cCCCChh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAV-----EKVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl-----~~~It~~ 427 (568)
|++|+.+|+.|...|++|++..-+. + . . .. .+.+..+.++++ ..|||++-|.- .+.|+.+
T Consensus 157 G~IG~~vA~~l~~~G~~V~~~d~~~-~--~-----~----~~--~~~~~~~l~ell-~~aDvV~l~~Plt~~t~~li~~~ 221 (343)
T 2yq5_A 157 GHIGSAVAEIFSAMGAKVIAYDVAY-N--P-----E----FE--PFLTYTDFDTVL-KEADIVSLHTPLFPSTENMIGEK 221 (343)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECSSC-C--G-----G----GT--TTCEECCHHHHH-HHCSEEEECCCCCTTTTTCBCHH
T ss_pred CHHHHHHHHHHhhCCCEEEEECCCh-h--h-----h----hh--ccccccCHHHHH-hcCCEEEEcCCCCHHHHHHhhHH
Confidence 9999999999999999999854221 1 1 0 00 022333334444 47999998754 5788888
Q ss_pred hHhccc-ceEEEecCCcch--HHHHHHHh
Q psy8846 428 NAHKIQ-AKIIAEAANESV--QESLERRF 453 (568)
Q Consensus 428 na~~i~-AkiIvE~AN~~~--~~~l~~~l 453 (568)
....++ -.+++.-|-+++ .+.|.+.|
T Consensus 222 ~l~~mk~gailIN~aRg~~vd~~aL~~aL 250 (343)
T 2yq5_A 222 QLKEMKKSAYLINCARGELVDTGALIKAL 250 (343)
T ss_dssp HHHHSCTTCEEEECSCGGGBCHHHHHHHH
T ss_pred HHhhCCCCcEEEECCCChhhhHHHHHHHH
Confidence 888886 468888888775 33454444
No 114
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=54.21 E-value=14 Score=35.25 Aligned_cols=21 Identities=5% Similarity=-0.307 Sum_probs=19.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEe
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGL 373 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaV 373 (568)
|-+|.++|+.|++.|++|+.+
T Consensus 11 ~gIG~~ia~~l~~~G~~V~~~ 31 (254)
T 1zmt_A 11 HFGGMGSALRLSEAGHTVACH 31 (254)
T ss_dssp STTHHHHHHHHHHTTCEEEEC
T ss_pred chHHHHHHHHHHHCCCEEEEE
Confidence 689999999999999998884
No 115
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=53.42 E-value=14 Score=35.50 Aligned_cols=91 Identities=15% Similarity=0.167 Sum_probs=53.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCCCCh---hhH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITK---NNA 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~It~---~na 429 (568)
|++|..+|+.|.+.|..|++ .|.+-+.+.+.+..+. | .+ -+.++++ .+||+++-|.-...... +-.
T Consensus 9 G~mG~~la~~l~~~g~~V~~-~~~~~~~~~~~~~~~~-g-------~~-~~~~~~~-~~aDvvi~~v~~~~~~~~~~~~~ 77 (264)
T 1i36_A 9 GEVAQTLASRLRSRGVEVVT-SLEGRSPSTIERARTV-G-------VT-ETSEEDV-YSCPVVISAVTPGVALGAARRAG 77 (264)
T ss_dssp SHHHHHHHHHHHHTTCEEEE-CCTTCCHHHHHHHHHH-T-------CE-ECCHHHH-HTSSEEEECSCGGGHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCeEEE-eCCccCHHHHHHHHHC-C-------Cc-CCHHHHH-hcCCEEEEECCCHHHHHHHHHHH
Confidence 99999999999999999877 3443355555554443 2 22 1222333 47999998865443222 222
Q ss_pred hcccceEEEecCCcch--HHHHHHHhcc
Q psy8846 430 HKIQAKIIAEAANESV--QESLERRFGN 455 (568)
Q Consensus 430 ~~i~AkiIvE~AN~~~--~~~l~~~l~~ 455 (568)
+.++. +|+.-++... .+.+.+.+.+
T Consensus 78 ~~~~~-~vi~~s~~~~~~~~~l~~~~~~ 104 (264)
T 1i36_A 78 RHVRG-IYVDINNISPETVRMASSLIEK 104 (264)
T ss_dssp TTCCS-EEEECSCCCHHHHHHHHHHCSS
T ss_pred HhcCc-EEEEccCCCHHHHHHHHHHHhh
Confidence 33444 8887765432 2345555443
No 116
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=53.41 E-value=11 Score=40.77 Aligned_cols=151 Identities=10% Similarity=0.025 Sum_probs=86.2
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH-hcCCcccCCCCeec-CCCCcccc--cceEEeeccccCCCChhh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL-DNGTIVGFPGAVPY-EGENLMYE--PCDIFVPAAVEKVITKNN 428 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~-~~g~v~~~~ga~~i-~~~~ll~~--~cDIliPaAl~~~It~~n 428 (568)
|++|..+|+.|.+.|.+|++ .+.+.+.+.+..+ +.+ + .+.... +.+++... +||+++-|--.+.-..+.
T Consensus 19 G~MG~~lA~~La~~G~~V~v---~dr~~~~~~~l~~~~~~---~-~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~v 91 (497)
T 2p4q_A 19 AVMGQNLILNAADHGFTVCA---YNRTQSKVDHFLANEAK---G-KSIIGATSIEDFISKLKRPRKVMLLVKAGAPVDAL 91 (497)
T ss_dssp SHHHHHHHHHHHHTTCCEEE---ECSSSHHHHHHHHTTTT---T-SSEECCSSHHHHHHTSCSSCEEEECCCSSHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEE---EeCCHHHHHHHHccccc---C-CCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHHHH
Confidence 99999999999999999876 4567777777665 321 0 122221 12233322 499999876554333333
Q ss_pred H----hccc-ceEEEecCCcchH--HHHHHHhccCCCcccccC------------------c----HHHHhh---cc---
Q psy8846 429 A----HKIQ-AKIIAEAANESVQ--ESLERRFGNVGGRIPVTP------------------S----ESFQKR---IS--- 473 (568)
Q Consensus 429 a----~~i~-AkiIvE~AN~~~~--~~l~~~l~~~GggI~vvP------------------d----e~~q~~---~~--- 473 (568)
+ +.++ -++|+..+|.... ..+.+.+...|...+-.| + +.++.. ++
T Consensus 92 l~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVsgg~~~a~~G~~im~gg~~e~~~~v~~ll~~~g~~~ 171 (497)
T 2p4q_A 92 INQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSGGEEGARYGPSLMPGGSEEAWPHIKNIFQSISAKS 171 (497)
T ss_dssp HHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEEEEEECGGGHHHHHHHHHHHSCEE
T ss_pred HHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCcccChhHhhcCCeEEecCCHHHHHHHHHHHHHhcCcc
Confidence 3 3443 4799999997642 234444444331110011 1 111111 11
Q ss_pred -----CCC--------cHHHHHHHHHHHHHHHHHHHHHHHHh-ccCCCCChhhh
Q psy8846 474 -----GAS--------EKDIVHSGLDYTMERSARAIMKTAMK-YNLGHLDINAH 513 (568)
Q Consensus 474 -----~~w--------e~e~V~~~L~~~M~~a~~~V~~~a~~-~~~~~~dlR~A 513 (568)
-.+ -...+++.+...+.+++.+.+..+++ .+ +|..+.
T Consensus 172 dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lG---l~~~~~ 222 (497)
T 2p4q_A 172 DGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRLGG---FTDKEI 222 (497)
T ss_dssp TTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CCHHHH
T ss_pred CCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC---CCHHHH
Confidence 111 12336777888888999999999998 57 565544
No 117
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=53.31 E-value=31 Score=34.39 Aligned_cols=104 Identities=8% Similarity=0.038 Sum_probs=58.8
Q ss_pred cCHHHHHHHHHHHCCC-eEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCc--ccccceEEeeccccCCCChh--
Q psy8846 353 GPVSMYLPQIWVQEKG-KCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENL--MYEPCDIFVPAAVEKVITKN-- 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~Ga-kvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~l--l~~~cDIliPaAl~~~It~~-- 427 (568)
|.+|..++..|.+.|+ +|+. . +-+.+++.+..++.+.- + + +.++-+++ .-.++||+|-|.-.+.....
T Consensus 150 Gg~g~aia~~L~~~G~~~V~v-~--nR~~~ka~~la~~~~~~--~-~-~~~~~~~~~~~~~~aDivIn~t~~~~~~~~~~ 222 (297)
T 2egg_A 150 GGGARGIYFSLLSTAAERIDM-A--NRTVEKAERLVREGDER--R-S-AYFSLAEAETRLAEYDIIINTTSVGMHPRVEV 222 (297)
T ss_dssp SHHHHHHHHHHHTTTCSEEEE-E--CSSHHHHHHHHHHSCSS--S-C-CEECHHHHHHTGGGCSEEEECSCTTCSSCCSC
T ss_pred HHHHHHHHHHHHHCCCCEEEE-E--eCCHHHHHHHHHHhhhc--c-C-ceeeHHHHHhhhccCCEEEECCCCCCCCCCCC
Confidence 8999999999999998 5554 3 34777777766654321 0 0 12111111 12479999988754432100
Q ss_pred ---hHhcc-cceEEEecCCcchHHHHHHHhccCCCcccccCc
Q psy8846 428 ---NAHKI-QAKIIAEAANESVQESLERRFGNVGGRIPVTPS 465 (568)
Q Consensus 428 ---na~~i-~AkiIvE~AN~~~~~~l~~~l~~~GggI~vvPd 465 (568)
....+ ...+|++-..+|....|-+...++| +.+++-
T Consensus 223 ~~i~~~~l~~~~~v~D~~y~P~~T~ll~~A~~~G--~~~v~G 262 (297)
T 2egg_A 223 QPLSLERLRPGVIVSDIIYNPLETKWLKEAKARG--ARVQNG 262 (297)
T ss_dssp CSSCCTTCCTTCEEEECCCSSSSCHHHHHHHHTT--CEEECS
T ss_pred CCCCHHHcCCCCEEEEcCCCCCCCHHHHHHHHCc--CEEECC
Confidence 01223 2468888888774322333334454 555665
No 118
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=53.21 E-value=4.6 Score=39.42 Aligned_cols=35 Identities=11% Similarity=0.050 Sum_probs=28.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDN 390 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~ 390 (568)
|-+|+++|+.|++.|++|+.+ +.+.+.+.+..++.
T Consensus 37 ~gIG~aia~~la~~G~~V~~~---~r~~~~~~~~~~~~ 71 (266)
T 3grp_A 37 GGIGEAIARCFHAQGAIVGLH---GTREDKLKEIAADL 71 (266)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHHh
Confidence 789999999999999999874 45777777766553
No 119
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=52.88 E-value=5.2 Score=38.47 Aligned_cols=34 Identities=18% Similarity=0.210 Sum_probs=27.2
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..++
T Consensus 10 ~gIG~aia~~l~~~G~~V~~~---~r~~~~~~~~~~~ 43 (248)
T 3asu_A 10 AGFGECITRRFIQQGHKVIAT---GRRQERLQELKDE 43 (248)
T ss_dssp STTHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHH
Confidence 689999999999999999884 4567777665554
No 120
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=52.64 E-value=79 Score=30.83 Aligned_cols=98 Identities=10% Similarity=0.021 Sum_probs=57.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeeccccCCCCh--hh-
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAAVEKVITK--NN- 428 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaAl~~~It~--~n- 428 (568)
|++|..+|+.|.+.|++|+. .| .+.+++.+..++.| .+.. +.++.+ .+|||++-|.-.+.... +.
T Consensus 138 G~~g~aia~~L~~~g~~V~v-~~--r~~~~~~~l~~~~g-------~~~~~~~~~~~-~~aDiVi~atp~~~~~~~~~~i 206 (275)
T 2hk9_A 138 GGASRAVIYALVKEGAKVFL-WN--RTKEKAIKLAQKFP-------LEVVNSPEEVI-DKVQVIVNTTSVGLKDEDPEIF 206 (275)
T ss_dssp SHHHHHHHHHHHHHTCEEEE-EC--SSHHHHHHHTTTSC-------EEECSCGGGTG-GGCSEEEECSSTTSSTTCCCSS
T ss_pred hHHHHHHHHHHHHcCCEEEE-EE--CCHHHHHHHHHHcC-------CeeehhHHhhh-cCCCEEEEeCCCCCCCCCCCCC
Confidence 99999999999999996554 43 46666666554432 2322 222334 48999998875543210 01
Q ss_pred -Hhccc-ceEEEecCCcchHHHHHHHhccCCCcccccCc
Q psy8846 429 -AHKIQ-AKIIAEAANESVQESLERRFGNVGGRIPVTPS 465 (568)
Q Consensus 429 -a~~i~-AkiIvE~AN~~~~~~l~~~l~~~GggI~vvPd 465 (568)
...++ -++|++-+. ..++.++.. .++ |+.++|-
T Consensus 207 ~~~~l~~g~~viDv~~-~~t~ll~~a-~~~--g~~~v~g 241 (275)
T 2hk9_A 207 NYDLIKKDHVVVDIIY-KETKLLKKA-KEK--GAKLLDG 241 (275)
T ss_dssp CGGGCCTTSEEEESSS-SCCHHHHHH-HHT--TCEEECS
T ss_pred CHHHcCCCCEEEEcCC-ChHHHHHHH-HHC--cCEEECC
Confidence 22343 468888888 433333332 234 4566666
No 121
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=52.34 E-value=21 Score=36.47 Aligned_cols=88 Identities=9% Similarity=0.059 Sum_probs=55.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeecc-----ccCCCChh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAA-----VEKVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaA-----l~~~It~~ 427 (568)
|++|..+|+.|...|++|++..-.. +.. ... .++..+.++++ ..|||++-|. ..+.|+++
T Consensus 154 G~IG~~~A~~l~~~G~~V~~~d~~~-~~~-----------~~~--~~~~~~l~ell-~~aDvV~~~~P~~~~t~~li~~~ 218 (333)
T 1dxy_A 154 GHIGQVAIKLFKGFGAKVIAYDPYP-MKG-----------DHP--DFDYVSLEDLF-KQSDVIDLHVPGIEQNTHIINEA 218 (333)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECSSC-CSS-----------CCT--TCEECCHHHHH-HHCSEEEECCCCCGGGTTSBCHH
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCc-chh-----------hHh--ccccCCHHHHH-hcCCEEEEcCCCchhHHHHhCHH
Confidence 9999999999999999998854221 100 001 12222333444 4899999885 34578877
Q ss_pred hHhccc-ceEEEecCCcch--HHHHHHHhcc
Q psy8846 428 NAHKIQ-AKIIAEAANESV--QESLERRFGN 455 (568)
Q Consensus 428 na~~i~-AkiIvE~AN~~~--~~~l~~~l~~ 455 (568)
....++ -.+++..+-+++ .+.|.+.|.+
T Consensus 219 ~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~ 249 (333)
T 1dxy_A 219 AFNLMKPGAIVINTARPNLIDTQAMLSNLKS 249 (333)
T ss_dssp HHHHSCTTEEEEECSCTTSBCHHHHHHHHHT
T ss_pred HHhhCCCCcEEEECCCCcccCHHHHHHHHHh
Confidence 777776 457777777663 3345555443
No 122
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=52.20 E-value=10 Score=40.62 Aligned_cols=149 Identities=11% Similarity=0.070 Sum_probs=85.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH-hcCCcccCCCCeec-CCCCccc--ccceEEeeccccCCCChhh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL-DNGTIVGFPGAVPY-EGENLMY--EPCDIFVPAAVEKVITKNN 428 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~-~~g~v~~~~ga~~i-~~~~ll~--~~cDIliPaAl~~~It~~n 428 (568)
|++|..+|..|.+.|.+|++ .+.+.+.+.+..+ +.. + .+.... +.+++.. .+||+++-|.-...-..+.
T Consensus 11 G~mG~~lA~~La~~G~~V~v---~dr~~~~~~~l~~~~~~---g-~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~v 83 (482)
T 2pgd_A 11 AVMGQNLILNMNDHGFVVCA---FNRTVSKVDDFLANEAK---G-TKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDNF 83 (482)
T ss_dssp SHHHHHHHHHHHHTTCCEEE---ECSSTHHHHHHHHTTTT---T-SSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHHH
T ss_pred HHHHHHHHHHHHHCCCeEEE---EeCCHHHHHHHHhcccc---C-CCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHHH
Confidence 99999999999999998766 3456677666655 210 1 122222 2234443 3899999876554333333
Q ss_pred H----hccc-ceEEEecCCcchH--HHHHHHhccCCCccccc--C----------------c------HHHHhh---ccC
Q psy8846 429 A----HKIQ-AKIIAEAANESVQ--ESLERRFGNVGGRIPVT--P----------------S------ESFQKR---ISG 474 (568)
Q Consensus 429 a----~~i~-AkiIvE~AN~~~~--~~l~~~l~~~GggI~vv--P----------------d------e~~q~~---~~~ 474 (568)
+ +.++ -++|+..+|.... ..+.+.+.+.| +.++ | . +.++.. .+.
T Consensus 84 l~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g--~~~v~~pv~g~~~~a~~g~~i~~gg~~e~~~~v~~ll~~~g~ 161 (482)
T 2pgd_A 84 IEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKG--ILFVGSGVSGGEDGARYGPSLMPGGNKEAWPHIKAIFQGIAA 161 (482)
T ss_dssp HHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTT--CEEEEEEEESHHHHHHHCCEEEEEECTTTHHHHHHHHHHHSC
T ss_pred HHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcC--CeEeCCCCCCChhhhccCCeEEeCCCHHHHHHHHHHHHHhhh
Confidence 3 3343 4799999997642 23444443332 2111 1 1 111111 111
Q ss_pred ---------CC--------cHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCCChhhh
Q psy8846 475 ---------AS--------EKDIVHSGLDYTMERSARAIMKTAMKY-NLGHLDINAH 513 (568)
Q Consensus 475 ---------~w--------e~e~V~~~L~~~M~~a~~~V~~~a~~~-~~~~~dlR~A 513 (568)
.+ -...+++.+...+.+.+.+.+..+++. + ++..+.
T Consensus 162 ~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G---~~~~~~ 215 (482)
T 2pgd_A 162 KVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLG---LGHKEM 215 (482)
T ss_dssp BCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC---CCHHHH
T ss_pred hccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---cCHHHH
Confidence 11 122456777788888899999999987 7 565543
No 123
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=52.02 E-value=9.5 Score=36.01 Aligned_cols=80 Identities=15% Similarity=0.097 Sum_probs=50.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCCCChhhH---
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNA--- 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~It~~na--- 429 (568)
|++|..+|+.|.+.|.+|+++ +.+.+.+.+..+. +.+..+.++.+ .+||+++-|.-...+ .+-.
T Consensus 37 G~~G~~la~~l~~~g~~V~~~---~r~~~~~~~~~~~--------g~~~~~~~~~~-~~~DvVi~av~~~~~-~~v~~l~ 103 (215)
T 2vns_A 37 GDFARSLATRLVGSGFKVVVG---SRNPKRTARLFPS--------AAQVTFQEEAV-SSPEVIFVAVFREHY-SSLCSLS 103 (215)
T ss_dssp SHHHHHHHHHHHHTTCCEEEE---ESSHHHHHHHSBT--------TSEEEEHHHHT-TSCSEEEECSCGGGS-GGGGGGH
T ss_pred CHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHc--------CCceecHHHHH-hCCCEEEECCChHHH-HHHHHHH
Confidence 999999999999999988763 3466665544332 22222222333 379999988654432 2222
Q ss_pred hcccceEEEecCCcch
Q psy8846 430 HKIQAKIIAEAANESV 445 (568)
Q Consensus 430 ~~i~AkiIvE~AN~~~ 445 (568)
+.++-++|+.-+|.--
T Consensus 104 ~~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 104 DQLAGKILVDVSNPTE 119 (215)
T ss_dssp HHHTTCEEEECCCCCH
T ss_pred HhcCCCEEEEeCCCcc
Confidence 2224578898888653
No 124
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=51.74 E-value=17 Score=36.81 Aligned_cols=84 Identities=13% Similarity=0.168 Sum_probs=55.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeec-----cccCCCChh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPA-----AVEKVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPa-----Al~~~It~~ 427 (568)
|++|..+|+.|...|++|++..-+ .+.. . ....+.++++ ..|||++-| ...+.|+++
T Consensus 153 G~IG~~~A~~l~~~G~~V~~~d~~-~~~~------------~----~~~~~l~ell-~~aDvV~l~~p~~~~t~~li~~~ 214 (311)
T 2cuk_A 153 GRIGQAVAKRALAFGMRVVYHART-PKPL------------P----YPFLSLEELL-KEADVVSLHTPLTPETHRLLNRE 214 (311)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECSS-CCSS------------S----SCBCCHHHHH-HHCSEEEECCCCCTTTTTCBCHH
T ss_pred CHHHHHHHHHHHHCCCEEEEECCC-Cccc------------c----cccCCHHHHH-hhCCEEEEeCCCChHHHhhcCHH
Confidence 999999999999999999874311 1000 0 1111122333 479999988 356788887
Q ss_pred hHhccc-ceEEEecCCcch--HHHHHHHhc
Q psy8846 428 NAHKIQ-AKIIAEAANESV--QESLERRFG 454 (568)
Q Consensus 428 na~~i~-AkiIvE~AN~~~--~~~l~~~l~ 454 (568)
....++ -.+++.-+.+++ .+.|.+.|.
T Consensus 215 ~l~~mk~ga~lin~srg~~vd~~aL~~aL~ 244 (311)
T 2cuk_A 215 RLFAMKRGAILLNTARGALVDTEALVEALR 244 (311)
T ss_dssp HHTTSCTTCEEEECSCGGGBCHHHHHHHHT
T ss_pred HHhhCCCCcEEEECCCCCccCHHHHHHHHh
Confidence 888776 467888888775 234555554
No 125
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=51.59 E-value=5 Score=38.40 Aligned_cols=35 Identities=9% Similarity=-0.010 Sum_probs=28.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDN 390 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~ 390 (568)
|-+|+++|+.|++.|++|+.+ +-+.+.+.+..++.
T Consensus 19 ~gIG~~~a~~l~~~G~~V~~~---~r~~~~~~~~~~~~ 53 (261)
T 3n74_A 19 SGFGEGMAKRFAKGGAKVVIV---DRDKAGAERVAGEI 53 (261)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHCCCEEEEE---cCCHHHHHHHHHHh
Confidence 679999999999999999884 45777777766553
No 126
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=51.33 E-value=4.9 Score=39.43 Aligned_cols=35 Identities=3% Similarity=-0.107 Sum_probs=28.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDN 390 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~ 390 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..++.
T Consensus 37 ~GIG~aia~~l~~~G~~V~~~---~r~~~~~~~~~~~~ 71 (277)
T 4dqx_A 37 SGIGRATAELFAKNGAYVVVA---DVNEDAAVRVANEI 71 (277)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESSHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHHh
Confidence 789999999999999999884 46777777766653
No 127
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=51.31 E-value=4.6 Score=39.62 Aligned_cols=34 Identities=6% Similarity=-0.119 Sum_probs=27.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..++
T Consensus 26 ~gIG~~~a~~L~~~G~~V~~~---~r~~~~~~~~~~~ 59 (291)
T 3rd5_A 26 SGLGAVTARELARRGATVIMA---VRDTRKGEAAART 59 (291)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHCCCEEEEE---ECCHHHHHHHHHH
Confidence 789999999999999999884 4677777666554
No 128
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=51.25 E-value=18 Score=38.12 Aligned_cols=86 Identities=17% Similarity=0.236 Sum_probs=51.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccC-------CC-CeecC-------CCCc--ccccceEE
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGF-------PG-AVPYE-------GENL--MYEPCDIF 415 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~-------~g-a~~i~-------~~~l--l~~~cDIl 415 (568)
|.+|..+|+.+...|++|++ .+.+.+++....+.......+ .+ ++.++ .+.+ +-.+|||+
T Consensus 193 G~iG~~aa~~a~~lGa~V~v---~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l~~aDIV 269 (381)
T 3p2y_A 193 GVAGLQALATAKRLGAKTTG---YDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAITKFDIV 269 (381)
T ss_dssp SHHHHHHHHHHHHHTCEEEE---ECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHHHTTCSEE
T ss_pred hHHHHHHHHHHHHCCCEEEE---EeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHHHhcCCEE
Confidence 99999999999999999776 344555555544422111111 00 00000 0111 12589999
Q ss_pred eeccc------cCCCChhhHhccc-ceEEEecC
Q psy8846 416 VPAAV------EKVITKNNAHKIQ-AKIIAEAA 441 (568)
Q Consensus 416 iPaAl------~~~It~~na~~i~-AkiIvE~A 441 (568)
|-|++ ...||++-+...+ -.+|+.-|
T Consensus 270 I~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 270 ITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp EECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred EECCCCCCcccceeecHHHHhcCCCCcEEEEEe
Confidence 87752 2468999998886 45676655
No 129
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=51.08 E-value=4.6 Score=38.83 Aligned_cols=34 Identities=3% Similarity=-0.238 Sum_probs=27.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..++
T Consensus 15 ~gIG~~ia~~l~~~G~~V~~~---~r~~~~~~~~~~~ 48 (254)
T 1hdc_A 15 RGLGAEAARQAVAAGARVVLA---DVLDEEGAATARE 48 (254)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHH
Confidence 789999999999999999884 4566776665544
No 130
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=50.74 E-value=7.6 Score=37.08 Aligned_cols=40 Identities=10% Similarity=0.066 Sum_probs=28.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGT 392 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~ 392 (568)
|-+|.++|+.|++.|++|+.+.-..-+.+.+.+...+.+.
T Consensus 26 ~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~ 65 (271)
T 3ek2_A 26 RSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGS 65 (271)
T ss_dssp TSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCC
Confidence 3599999999999999998865333334555555555544
No 131
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=50.70 E-value=10 Score=36.46 Aligned_cols=22 Identities=9% Similarity=-0.105 Sum_probs=19.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.+.
T Consensus 21 ~gIG~~ia~~l~~~G~~V~~~~ 42 (265)
T 1qsg_A 21 LSIAYGIAQAMHREGAELAFTY 42 (265)
T ss_dssp TSHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHCCCEEEEEc
Confidence 4699999999999999998864
No 132
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=50.42 E-value=14 Score=37.65 Aligned_cols=87 Identities=15% Similarity=0.172 Sum_probs=55.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeecc-----ccCCCCh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAA-----VEKVITK 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaA-----l~~~It~ 426 (568)
|++|..+|+.|...|++|++.. ..-+.. + .+ + ++.. +.++++ ..|||++-|. ..+.|++
T Consensus 155 G~IG~~~A~~l~~~G~~V~~~d-~~~~~~-~----~~-~-------~~~~~~l~ell-~~aDvV~l~~p~~~~t~~li~~ 219 (333)
T 1j4a_A 155 GHIGQVFMQIMEGFGAKVITYD-IFRNPE-L----EK-K-------GYYVDSLDDLY-KQADVISLHVPDVPANVHMIND 219 (333)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEC-SSCCHH-H----HH-T-------TCBCSCHHHHH-HHCSEEEECSCCCGGGTTCBSH
T ss_pred CHHHHHHHHHHHHCCCEEEEEC-CCcchh-H----Hh-h-------CeecCCHHHHH-hhCCEEEEcCCCcHHHHHHHhH
Confidence 9999999999999999998844 322221 1 11 1 1122 223444 4799999885 3466777
Q ss_pred hhHhccc-ceEEEecCCcch--HHHHHHHhc
Q psy8846 427 NNAHKIQ-AKIIAEAANESV--QESLERRFG 454 (568)
Q Consensus 427 ~na~~i~-AkiIvE~AN~~~--~~~l~~~l~ 454 (568)
+....++ -.+++.-+-+++ .+.|.+.|.
T Consensus 220 ~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~ 250 (333)
T 1j4a_A 220 ESIAKMKQDVVIVNVSRGPLVDTDAVIRGLD 250 (333)
T ss_dssp HHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 7777775 467777777664 334444443
No 133
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=50.34 E-value=5 Score=38.41 Aligned_cols=35 Identities=3% Similarity=-0.030 Sum_probs=28.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDN 390 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~ 390 (568)
|-+|+++|+.|++.|++|+.+ +.+.+.+.+..++.
T Consensus 12 ~gIG~~ia~~l~~~G~~V~~~---~r~~~~~~~~~~~~ 46 (247)
T 3dii_A 12 HGIGKQICLDFLEAGDKVCFI---DIDEKRSADFAKER 46 (247)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHhc
Confidence 679999999999999999884 46777777665543
No 134
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=49.98 E-value=29 Score=35.42 Aligned_cols=88 Identities=9% Similarity=0.089 Sum_probs=57.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCC-eecCCCCcccccceEEeecc-----ccCCCCh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGA-VPYEGENLMYEPCDIFVPAA-----VEKVITK 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga-~~i~~~~ll~~~cDIliPaA-----l~~~It~ 426 (568)
|++|..+|+.|...|++|++..-+.-. ...+... ...+.++++ .+|||++-|. ..+.|+.
T Consensus 146 G~IG~~vA~~l~~~G~~V~~~dr~~~~-------------~~~~~~~~~~~~l~ell-~~aDvV~l~lPlt~~t~~li~~ 211 (324)
T 3evt_A 146 GQIGQSLAAKASALGMHVIGVNTTGHP-------------ADHFHETVAFTATADAL-ATANFIVNALPLTPTTHHLFST 211 (324)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESSCCC-------------CTTCSEEEEGGGCHHHH-HHCSEEEECCCCCGGGTTCBSH
T ss_pred CHHHHHHHHHHHhCCCEEEEECCCcch-------------hHhHhhccccCCHHHHH-hhCCEEEEcCCCchHHHHhcCH
Confidence 999999999999999999985422110 0111111 111233444 4799999774 3678888
Q ss_pred hhHhccc-ceEEEecCCcch--HHHHHHHhc
Q psy8846 427 NNAHKIQ-AKIIAEAANESV--QESLERRFG 454 (568)
Q Consensus 427 ~na~~i~-AkiIvE~AN~~~--~~~l~~~l~ 454 (568)
+....++ -.+++..|-+++ .+.|.+.|.
T Consensus 212 ~~l~~mk~gailIN~aRG~~vd~~aL~~aL~ 242 (324)
T 3evt_A 212 ELFQQTKQQPMLINIGRGPAVDTTALMTALD 242 (324)
T ss_dssp HHHHTCCSCCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHhcCCCCCEEEEcCCChhhhHHHHHHHHH
Confidence 8888886 468888888775 344555553
No 135
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=49.49 E-value=14 Score=38.69 Aligned_cols=80 Identities=19% Similarity=0.201 Sum_probs=49.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC-----------------CC--------Cc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE-----------------GE--------NL 407 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~-----------------~~--------~l 407 (568)
|.+|..+++.+...|++|++ . +.+.+.+....+ .| ++.+. .+ .+
T Consensus 181 G~iG~~aa~~a~~~Ga~V~v-~--D~~~~~~~~~~~-lG-------a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 249 (401)
T 1x13_A 181 GVAGLAAIGAANSLGAIVRA-F--DTRPEVKEQVQS-MG-------AEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF 249 (401)
T ss_dssp SHHHHHHHHHHHHTTCEEEE-E--CSCGGGHHHHHH-TT-------CEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEE-E--cCCHHHHHHHHH-cC-------CEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence 99999999999999998766 3 334444444322 22 22211 00 11
Q ss_pred cc--ccceEEeecc-cc-----CCCChhhHhccc-ceEEEecCCc
Q psy8846 408 MY--EPCDIFVPAA-VE-----KVITKNNAHKIQ-AKIIAEAANE 443 (568)
Q Consensus 408 l~--~~cDIliPaA-l~-----~~It~~na~~i~-AkiIvE~AN~ 443 (568)
-+ ..+||+|-|+ +. ..|+.+-...++ -.+|+.-|+.
T Consensus 250 ~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~ 294 (401)
T 1x13_A 250 AAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQ 294 (401)
T ss_dssp HHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGG
T ss_pred HHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCC
Confidence 11 2699999986 22 567888888775 3567777753
No 136
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=49.43 E-value=13 Score=34.87 Aligned_cols=61 Identities=21% Similarity=0.113 Sum_probs=36.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcC-CcccCCCCeecCCCCccc--ccceEEeecccc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNG-TIVGFPGAVPYEGENLMY--EPCDIFVPAAVE 421 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g-~v~~~~ga~~i~~~~ll~--~~cDIliPaAl~ 421 (568)
|.+|+++++.|.+.|++|++++- +.+.+.+.....- .+... +. + +++.. .++|++|-||-.
T Consensus 31 G~iG~~l~~~L~~~G~~V~~~~R---~~~~~~~~~~~~~~~~~~~-Dl---~-~~~~~~~~~~D~vi~~ag~ 94 (236)
T 3e8x_A 31 GKVARYLLSELKNKGHEPVAMVR---NEEQGPELRERGASDIVVA-NL---E-EDFSHAFASIDAVVFAAGS 94 (236)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEES---SGGGHHHHHHTTCSEEEEC-CT---T-SCCGGGGTTCSEEEECCCC
T ss_pred ChHHHHHHHHHHhCCCeEEEEEC---ChHHHHHHHhCCCceEEEc-cc---H-HHHHHHHcCCCEEEECCCC
Confidence 89999999999999999999653 3444444333211 11000 00 1 22221 279999988863
No 137
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=49.32 E-value=8.4 Score=37.30 Aligned_cols=32 Identities=6% Similarity=0.047 Sum_probs=25.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYK 387 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~ 387 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..
T Consensus 30 ~gIG~aia~~l~~~G~~V~~~---~r~~~~~~~~~ 61 (266)
T 4egf_A 30 KGIGADIARAFAAAGARLVLS---GRDVSELDAAR 61 (266)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHH
Confidence 789999999999999998874 45666665543
No 138
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=49.24 E-value=3.4 Score=40.10 Aligned_cols=34 Identities=15% Similarity=0.143 Sum_probs=25.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|-+|+++|+.|++.|++|++++ .+.+.+.+...+
T Consensus 15 ~gIG~~~a~~l~~~G~~V~~~~---r~~~~~~~~~~~ 48 (281)
T 3m1a_A 15 SGFGRAIAEAAVAAGDTVIGTA---RRTEALDDLVAA 48 (281)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE---SSGGGGHHHHHH
T ss_pred ChHHHHHHHHHHHCCCEEEEEe---CCHHHHHHHHHh
Confidence 7899999999999999999854 344445554444
No 139
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=49.13 E-value=13 Score=37.14 Aligned_cols=36 Identities=14% Similarity=0.136 Sum_probs=30.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNG 391 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g 391 (568)
+-.|..+|+.|++.||+|+. .+.+.+.|.+..++.|
T Consensus 39 ~GIG~aiA~~la~~Ga~V~i---~~r~~~~l~~~~~~~g 74 (273)
T 4fgs_A 39 SGIGLAAAKRFVAEGARVFI---TGRRKDVLDAAIAEIG 74 (273)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---EESCHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHCCCEEEE---EECCHHHHHHHHHHcC
Confidence 46999999999999999987 4678888888776643
No 140
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=49.10 E-value=11 Score=36.79 Aligned_cols=33 Identities=3% Similarity=-0.081 Sum_probs=26.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|-+|.++|+.|++.|++|+. .+.+.+.+.+..+
T Consensus 36 ~gIG~aia~~la~~G~~V~~---~~r~~~~~~~~~~ 68 (271)
T 4ibo_A 36 RGLGRAMAEGLAVAGARILI---NGTDPSRVAQTVQ 68 (271)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---CCSCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEE---EeCCHHHHHHHHH
Confidence 78999999999999999887 4567776665544
No 141
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=48.87 E-value=7.1 Score=36.58 Aligned_cols=34 Identities=6% Similarity=0.020 Sum_probs=27.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|.+|+++|+.|.+.|++|++++ .+.+.+.+..++
T Consensus 15 ggiG~~~a~~l~~~G~~V~~~~---r~~~~~~~~~~~ 48 (234)
T 2ehd_A 15 RGIGEATARLLHAKGYRVGLMA---RDEKRLQALAAE 48 (234)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEEE---CCHHHHHHHHHH
Confidence 7899999999999999998853 466666665554
No 142
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=48.79 E-value=8.6 Score=36.25 Aligned_cols=22 Identities=5% Similarity=0.049 Sum_probs=20.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|+++|+.|.+.|++|++++
T Consensus 17 ggiG~~~a~~l~~~G~~V~~~~ 38 (258)
T 3afn_B 17 QGIGLATARLFARAGAKVGLHG 38 (258)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred ChHHHHHHHHHHHCCCEEEEEC
Confidence 7899999999999999998865
No 143
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=48.76 E-value=4.9 Score=38.54 Aligned_cols=34 Identities=6% Similarity=0.034 Sum_probs=26.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|-+|+++|+.|++.|++|+.+ +.+.+.+.+..++
T Consensus 19 ~gIG~a~a~~l~~~G~~V~~~---~r~~~~~~~~~~~ 52 (248)
T 3op4_A 19 RGIGKAIAELLAERGAKVIGT---ATSESGAQAISDY 52 (248)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHH
Confidence 679999999999999999884 4566666655443
No 144
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=48.76 E-value=11 Score=37.00 Aligned_cols=37 Identities=3% Similarity=-0.083 Sum_probs=30.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGT 392 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~ 392 (568)
+-.|..+|+.|++.||+|+. .++|.+.+.+..++.+.
T Consensus 12 ~GIG~aia~~la~~Ga~V~~---~~~~~~~~~~~~~~~~~ 48 (247)
T 3ged_A 12 HGIGKQICLDFLEAGDKVCF---IDIDEKRSADFAKERPN 48 (247)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---EESCHHHHHHHHTTCTT
T ss_pred CHHHHHHHHHHHHCCCEEEE---EeCCHHHHHHHHHhcCC
Confidence 46899999999999999987 46788888877766543
No 145
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=48.11 E-value=5.3 Score=37.81 Aligned_cols=34 Identities=9% Similarity=0.151 Sum_probs=26.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|-+|+++|+.|.+.|++|+++. -+.+.+.+..++
T Consensus 21 ggiG~~la~~l~~~G~~V~~~~---r~~~~~~~~~~~ 54 (254)
T 2wsb_A 21 SGIGLEICRAFAASGARLILID---REAAALDRAAQE 54 (254)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEEe---CCHHHHHHHHHH
Confidence 8899999999999999998853 456666554443
No 146
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=47.67 E-value=8.6 Score=36.79 Aligned_cols=34 Identities=12% Similarity=0.056 Sum_probs=27.2
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|-+|+++|+.|++.|++|+.+ +.+.+.+.+..++
T Consensus 16 ~giG~~ia~~l~~~G~~V~~~---~r~~~~~~~~~~~ 49 (253)
T 1hxh_A 16 SGVGLEVVKLLLGEGAKVAFS---DINEAAGQQLAAE 49 (253)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---CSCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHH
Confidence 789999999999999998884 4567776665544
No 147
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=47.46 E-value=34 Score=35.19 Aligned_cols=88 Identities=11% Similarity=0.094 Sum_probs=51.9
Q ss_pred cCHHHHHHHHHHHC-CCeEeEeCCCCCCHHHHHHHH---HhcCCcc-cC----CC------Cee---c---CCCCc-c-c
Q psy8846 353 GPVSMYLPQIWVQE-KGKCPGLPTHTRKPLALEEYK---LDNGTIV-GF----PG------AVP---Y---EGENL-M-Y 409 (568)
Q Consensus 353 GnVG~~~A~~L~~~-GakvvaVsD~GiD~~~L~~~~---~~~g~v~-~~----~g------a~~---i---~~~~l-l-~ 409 (568)
|.+|..+++.|.+. +.+||+|.|.-.|.+.+.... ..+|... +. .+ .+. + +++++ | .
T Consensus 12 GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~~~dp~~l~w~~ 91 (337)
T 3e5r_O 12 GRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIRNPDEIPWAE 91 (337)
T ss_dssp SHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEECCSCGGGCCHHH
T ss_pred CHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEecCChHHccccc
Confidence 99999999999886 799999998434666443332 2333321 10 01 011 2 23333 2 3
Q ss_pred ccceEEeeccccCCCChhhHhcc---cc-eEEEecC
Q psy8846 410 EPCDIFVPAAVEKVITKNNAHKI---QA-KIIAEAA 441 (568)
Q Consensus 410 ~~cDIliPaAl~~~It~~na~~i---~A-kiIvE~A 441 (568)
.+||+++=| .+.-.+.+.+... .+ |+|+++.
T Consensus 92 ~~vDvV~ea-Tg~~~~~e~a~~~l~aGak~VVIs~p 126 (337)
T 3e5r_O 92 AGAEYVVES-TGVFTDKEKAAAHLKGGAKKVVISAP 126 (337)
T ss_dssp HTCSEEEEC-SSSCCSHHHHTHHHHTTCSEEEESSC
T ss_pred cCCCEEEEC-CCchhhHHHHHHHHHcCCCEEEEecC
Confidence 579999887 4555666666644 23 3666653
No 148
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=47.42 E-value=5.9 Score=38.80 Aligned_cols=35 Identities=17% Similarity=0.220 Sum_probs=28.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDN 390 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~ 390 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+...+.
T Consensus 15 ~GIG~aia~~la~~G~~V~~~---~r~~~~~~~~~~~~ 49 (281)
T 3zv4_A 15 SGLGRALVDRFVAEGARVAVL---DKSAERLRELEVAH 49 (281)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHCcCEEEEE---eCCHHHHHHHHHHc
Confidence 679999999999999999884 45777777766554
No 149
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=47.22 E-value=8.8 Score=36.09 Aligned_cols=24 Identities=0% Similarity=-0.306 Sum_probs=21.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTH 376 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~ 376 (568)
|.+|+++|+.|.+.|++|+.+.+.
T Consensus 15 ggiG~~~a~~l~~~G~~V~~~~~r 38 (247)
T 2hq1_A 15 RGLGKAIAWKLGNMGANIVLNGSP 38 (247)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEECT
T ss_pred chHHHHHHHHHHHCCCEEEEEcCc
Confidence 789999999999999999987443
No 150
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=46.96 E-value=11 Score=36.65 Aligned_cols=89 Identities=16% Similarity=0.094 Sum_probs=50.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC-CCCcccccceEEeeccccCCCChhhH--
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE-GENLMYEPCDIFVPAAVEKVITKNNA-- 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~-~~~ll~~~cDIliPaAl~~~It~~na-- 429 (568)
|++|..+|+.|.+.|.+|+. .| +.+.+.+..+. | ....+ .++++ .+||+++-|.-......+.+
T Consensus 12 G~~G~~~a~~l~~~g~~V~~-~~---~~~~~~~~~~~-g-------~~~~~~~~~~~-~~~D~vi~~vp~~~~~~~v~~~ 78 (295)
T 1yb4_A 12 GIMGSPMAINLARAGHQLHV-TT---IGPVADELLSL-G-------AVNVETARQVT-EFADIIFIMVPDTPQVEDVLFG 78 (295)
T ss_dssp STTHHHHHHHHHHTTCEEEE-CC---SSCCCHHHHTT-T-------CBCCSSHHHHH-HTCSEEEECCSSHHHHHHHHHS
T ss_pred CHHHHHHHHHHHhCCCEEEE-Ec---CHHHHHHHHHc-C-------CcccCCHHHHH-hcCCEEEEECCCHHHHHHHHhC
Confidence 99999999999999999875 33 33333333322 2 22111 22333 37999998863332222222
Q ss_pred -----hccc-ceEEEecCCcch--HHHHHHHhc
Q psy8846 430 -----HKIQ-AKIIAEAANESV--QESLERRFG 454 (568)
Q Consensus 430 -----~~i~-AkiIvE~AN~~~--~~~l~~~l~ 454 (568)
+.++ -++|+.-+|... .+.+.+.+.
T Consensus 79 ~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~ 111 (295)
T 1yb4_A 79 EHGCAKTSLQGKTIVDMSSISPIETKRFAQRVN 111 (295)
T ss_dssp TTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHH
T ss_pred chhHhhcCCCCCEEEECCCCCHHHHHHHHHHHH
Confidence 2233 468888888752 233444443
No 151
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=46.85 E-value=64 Score=33.66 Aligned_cols=89 Identities=9% Similarity=0.066 Sum_probs=53.5
Q ss_pred HHHHHHHHHCCCeEeEeCCC----CCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCCCChhhHhcc
Q psy8846 357 MYLPQIWVQEKGKCPGLPTH----TRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKI 432 (568)
Q Consensus 357 ~~~A~~L~~~GakvvaVsD~----GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~It~~na~~i 432 (568)
-..++.|.+.|.+|+..++. |+.-+...+ . |++.++.+++|. ||+++-. .....+..+.+
T Consensus 27 P~~v~~L~~~G~~V~ve~~ag~~~gf~d~~y~~---a--------Ga~i~~~~~~~~--adiil~v---k~p~~~~i~~l 90 (401)
T 1x13_A 27 PKTVEQLLKLGFTVAVESGAGQLASFDDKAFVQ---A--------GAEIVEGNSVWQ--SEIILKV---NAPLDDEIALL 90 (401)
T ss_dssp HHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHH---H--------TCEEECGGGGGS--SSEEECS---SCCCHHHHTTC
T ss_pred HHHHHHHHHCCCEEEEEECCCcccCCChHHHHH---C--------CCEEeccHHHhc--CCeEEEe---CCCCHHHHHHh
Confidence 34567788899999888877 565444322 2 677666666776 9998732 22346667776
Q ss_pred c--ceEEEecCCcchHHHHHHHhccCCCcccccC
Q psy8846 433 Q--AKIIAEAANESVQESLERRFGNVGGRIPVTP 464 (568)
Q Consensus 433 ~--AkiIvE~AN~~~~~~l~~~l~~~GggI~vvP 464 (568)
+ .++|+ ..+...+..+-+.+.++ ||.++-
T Consensus 91 ~~~~~li~-~~~~~~d~~~~~al~~~--gI~v~~ 121 (401)
T 1x13_A 91 NPGTTLVS-FIWPAQNPELMQKLAER--NVTVMA 121 (401)
T ss_dssp CTTCEEEE-CCCGGGCHHHHHHHHHT--TCEEEE
T ss_pred cCCCcEEE-EecCCCCHHHHHHHHHC--CCEEEE
Confidence 4 55554 55544444433444444 577753
No 152
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=46.53 E-value=26 Score=33.77 Aligned_cols=81 Identities=12% Similarity=0.100 Sum_probs=51.2
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeeccccCCCChhhHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAAVEKVITKNNAHK 431 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaAl~~~It~~na~~ 431 (568)
|++|..+|+.|.+.|.+|+++ +.+.+.+.... +.|... ... +.+++ .+||+++-|.-... ..+.+..
T Consensus 9 G~~G~~~a~~l~~~g~~V~~~---~~~~~~~~~~~-~~g~~~-----~~~~~~~~~--~~~D~vi~av~~~~-~~~~~~~ 76 (279)
T 2f1k_A 9 GLIGASLAGDLRRRGHYLIGV---SRQQSTCEKAV-ERQLVD-----EAGQDLSLL--QTAKIIFLCTPIQL-ILPTLEK 76 (279)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---CSCHHHHHHHH-HTTSCS-----EEESCGGGG--TTCSEEEECSCHHH-HHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEE---ECCHHHHHHHH-hCCCCc-----cccCCHHHh--CCCCEEEEECCHHH-HHHHHHH
Confidence 999999999999999988773 45777766654 333210 112 22344 68999998865432 2333333
Q ss_pred ----cc-ceEEEecCCcch
Q psy8846 432 ----IQ-AKIIAEAANESV 445 (568)
Q Consensus 432 ----i~-AkiIvE~AN~~~ 445 (568)
++ -.+|+..+|.+.
T Consensus 77 l~~~~~~~~~vv~~~~~~~ 95 (279)
T 2f1k_A 77 LIPHLSPTAIVTDVASVKT 95 (279)
T ss_dssp HGGGSCTTCEEEECCSCCH
T ss_pred HHhhCCCCCEEEECCCCcH
Confidence 33 457888877553
No 153
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=46.37 E-value=13 Score=36.55 Aligned_cols=34 Identities=18% Similarity=0.149 Sum_probs=27.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|-+|.++|+.|++.|++|+. .+.+.+.+.+..++
T Consensus 18 ~GIG~aia~~la~~G~~V~~---~~r~~~~~~~~~~~ 51 (280)
T 3tox_A 18 SGIGRAAALLFAREGAKVVV---TARNGNALAELTDE 51 (280)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---CCSCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEE---EECCHHHHHHHHHH
Confidence 67999999999999999887 45677777666553
No 154
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=46.26 E-value=1.6e+02 Score=29.00 Aligned_cols=22 Identities=5% Similarity=0.152 Sum_probs=20.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|++|..+|..|++.|..|..+.
T Consensus 11 GaiG~~~a~~L~~~g~~V~~~~ 32 (320)
T 3i83_A 11 GAIGSFYGALLAKTGHCVSVVS 32 (320)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHHHHHHHhCCCeEEEEe
Confidence 9999999999999999888765
No 155
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=46.19 E-value=8.1 Score=36.21 Aligned_cols=32 Identities=6% Similarity=-0.158 Sum_probs=24.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEY 386 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~ 386 (568)
|.+|.++|+.|.+.|++|+++.+ .+.+.+.+.
T Consensus 11 ggiG~~~a~~l~~~G~~v~~~~~--r~~~~~~~~ 42 (245)
T 2ph3_A 11 RGIGRAIALRLAEDGFALAIHYG--QNREKAEEV 42 (245)
T ss_dssp SHHHHHHHHHHHTTTCEEEEEES--SCHHHHHHH
T ss_pred chHHHHHHHHHHHCCCEEEEEcC--CCHHHHHHH
Confidence 78999999999999999998633 345554443
No 156
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=46.19 E-value=7.4 Score=40.14 Aligned_cols=75 Identities=11% Similarity=0.069 Sum_probs=46.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCC-c-ccCCCCeecCCCCcccccceEEeeccccC------CC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGT-I-VGFPGAVPYEGENLMYEPCDIFVPAAVEK------VI 424 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~-v-~~~~ga~~i~~~~ll~~~cDIliPaAl~~------~I 424 (568)
|.+|..+|+.|...|++|++ .+.+.+++....+..|. + ......+ +-++++ ..+||++-|+... .+
T Consensus 175 G~iG~~~a~~l~~~Ga~V~~---~d~~~~~~~~~~~~~g~~~~~~~~~~~--~l~~~~-~~~DvVi~~~g~~~~~~~~li 248 (369)
T 2eez_A 175 GTVGTNAAKIALGMGAQVTI---LDVNHKRLQYLDDVFGGRVITLTATEA--NIKKSV-QHADLLIGAVLVPGAKAPKLV 248 (369)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---EESCHHHHHHHHHHTTTSEEEEECCHH--HHHHHH-HHCSEEEECCC-------CCS
T ss_pred CHHHHHHHHHHHhCCCEEEE---EECCHHHHHHHHHhcCceEEEecCCHH--HHHHHH-hCCCEEEECCCCCccccchhH
Confidence 99999999999999999887 34577776665543321 0 0000000 001222 3799999988633 35
Q ss_pred ChhhHhccc
Q psy8846 425 TKNNAHKIQ 433 (568)
Q Consensus 425 t~~na~~i~ 433 (568)
+.+-.+.++
T Consensus 249 ~~~~l~~mk 257 (369)
T 2eez_A 249 TRDMLSLMK 257 (369)
T ss_dssp CHHHHTTSC
T ss_pred HHHHHHhhc
Confidence 777777665
No 157
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=46.11 E-value=9.3 Score=36.98 Aligned_cols=20 Identities=10% Similarity=-0.031 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHHCCCeEeEe
Q psy8846 354 PVSMYLPQIWVQEKGKCPGL 373 (568)
Q Consensus 354 nVG~~~A~~L~~~GakvvaV 373 (568)
-.|..+|+.|++.||+|+.+
T Consensus 19 GIG~aiA~~la~~Ga~Vvi~ 38 (256)
T 4fs3_A 19 SIAFGVAKVLDQLGAKLVFT 38 (256)
T ss_dssp CHHHHHHHHHHHTTCEEEEE
T ss_pred hHHHHHHHHHHHCCCEEEEE
Confidence 38999999999999998874
No 158
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=45.94 E-value=32 Score=36.62 Aligned_cols=33 Identities=6% Similarity=0.131 Sum_probs=29.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|.||..+|..|++.|..|++ .++|.+++.++.+
T Consensus 20 GyvGlp~A~~La~~G~~V~~---~D~~~~kv~~L~~ 52 (431)
T 3ojo_A 20 GYIGLPTSIMFAKHGVDVLG---VDINQQTIDKLQN 52 (431)
T ss_dssp STTHHHHHHHHHHTTCEEEE---ECSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHCCCEEEE---EECCHHHHHHHHC
Confidence 99999999999999999999 6789888887755
No 159
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=45.75 E-value=7.4 Score=37.37 Aligned_cols=34 Identities=3% Similarity=-0.076 Sum_probs=26.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..++
T Consensus 22 ~gIG~~ia~~l~~~G~~V~~~---~r~~~~~~~~~~~ 55 (263)
T 3ak4_A 22 KGIGAAIARALDKAGATVAIA---DLDVMAAQAVVAG 55 (263)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHH
Confidence 789999999999999999884 4566666655443
No 160
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=45.70 E-value=36 Score=34.16 Aligned_cols=85 Identities=9% Similarity=0.041 Sum_probs=55.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeeccc-----cCCCCh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAAV-----EKVITK 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaAl-----~~~It~ 426 (568)
|++|..+|+.|...|++|++..-+.-. . ...+.. +.++++ .+|||++-|.- .+.|+.
T Consensus 131 G~IG~~vA~~l~~~G~~V~~~dr~~~~-------------~---~~~~~~~~l~ell-~~aDiV~l~~P~t~~t~~li~~ 193 (290)
T 3gvx_A 131 GGIGRRVAHLAKAFGMRVIAYTRSSVD-------------Q---NVDVISESPADLF-RQSDFVLIAIPLTDKTRGMVNS 193 (290)
T ss_dssp SHHHHHHHHHHHHHTCEEEEECSSCCC-------------T---TCSEECSSHHHHH-HHCSEEEECCCCCTTTTTCBSH
T ss_pred CchhHHHHHHHHhhCcEEEEEeccccc-------------c---ccccccCChHHHh-hccCeEEEEeeccccchhhhhH
Confidence 999999999999999999995422100 0 012222 222333 47999987753 567888
Q ss_pred hhHhccc-ceEEEecCCcch--HHHHHHHhc
Q psy8846 427 NNAHKIQ-AKIIAEAANESV--QESLERRFG 454 (568)
Q Consensus 427 ~na~~i~-AkiIvE~AN~~~--~~~l~~~l~ 454 (568)
+....++ -.+++.-+-++. .+.|.+.|.
T Consensus 194 ~~l~~mk~gailIN~aRG~~vd~~aL~~aL~ 224 (290)
T 3gvx_A 194 RLLANARKNLTIVNVARADVVSKPDMIGFLK 224 (290)
T ss_dssp HHHTTCCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHhhhhcCceEEEeehhcccCCcchhhhhh
Confidence 8888886 468888888774 334555443
No 161
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=45.19 E-value=30 Score=36.11 Aligned_cols=81 Identities=19% Similarity=0.180 Sum_probs=51.3
Q ss_pred cCHHHHHHHHHHHCCC-eEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCccc--ccceEEeecccc--CCCChh
Q psy8846 353 GPVSMYLPQIWVQEKG-KCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMY--EPCDIFVPAAVE--KVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~Ga-kvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~--~~cDIliPaAl~--~~It~~ 427 (568)
|.+|..+++.|...|+ +|+++ +-+.+++.+...+.| ++.++.+++-+ ..+||++-|.-. ..++.+
T Consensus 176 G~iG~~~a~~l~~~G~~~V~v~---~r~~~ra~~la~~~g-------~~~~~~~~l~~~l~~aDvVi~at~~~~~~~~~~ 245 (404)
T 1gpj_A 176 GEMGKTVAKSLVDRGVRAVLVA---NRTYERAVELARDLG-------GEAVRFDELVDHLARSDVVVSATAAPHPVIHVD 245 (404)
T ss_dssp CHHHHHHHHHHHHHCCSEEEEE---CSSHHHHHHHHHHHT-------CEECCGGGHHHHHHTCSEEEECCSSSSCCBCHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEE---eCCHHHHHHHHHHcC-------CceecHHhHHHHhcCCCEEEEccCCCCceecHH
Confidence 9999999999999999 77663 345666555544433 22222122211 479999988642 345666
Q ss_pred hHhc-c------cceEEEecCCc
Q psy8846 428 NAHK-I------QAKIIAEAANE 443 (568)
Q Consensus 428 na~~-i------~AkiIvE~AN~ 443 (568)
.... + +-.++++.+++
T Consensus 246 ~l~~~~lk~r~~~~~v~vdia~P 268 (404)
T 1gpj_A 246 DVREALRKRDRRSPILIIDIANP 268 (404)
T ss_dssp HHHHHHHHCSSCCCEEEEECCSS
T ss_pred HHHHHHHhccCCCCEEEEEccCC
Confidence 6655 3 34578888874
No 162
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=45.16 E-value=5.9 Score=37.87 Aligned_cols=21 Identities=5% Similarity=0.003 Sum_probs=19.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEe
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGL 373 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaV 373 (568)
|.+|.++|+.|++.|++|+.+
T Consensus 17 ~gIG~~ia~~l~~~G~~V~~~ 37 (249)
T 2ew8_A 17 NGIGRAIAERFAVEGADIAIA 37 (249)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHHHCCCEEEEE
Confidence 789999999999999999885
No 163
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=45.06 E-value=55 Score=32.56 Aligned_cols=103 Identities=7% Similarity=-0.043 Sum_probs=56.9
Q ss_pred cCHHHHHHHHHHHCCC-eEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCCCChh---h
Q psy8846 353 GPVSMYLPQIWVQEKG-KCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKN---N 428 (568)
Q Consensus 353 GnVG~~~A~~L~~~Ga-kvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~It~~---n 428 (568)
|.+|..++..|.+.|+ +|+. . +-+.++..+..++.+.. .....++.+++. .++||+|=|--.+.-... .
T Consensus 135 Gg~g~aia~~L~~~G~~~v~v-~--~R~~~~a~~la~~~~~~---~~~~~~~~~~l~-~~aDiIInaTp~gm~~~~~~l~ 207 (281)
T 3o8q_A 135 GGAARGVLKPLLDQQPASITV-T--NRTFAKAEQLAELVAAY---GEVKAQAFEQLK-QSYDVIINSTSASLDGELPAID 207 (281)
T ss_dssp SHHHHHHHHHHHTTCCSEEEE-E--ESSHHHHHHHHHHHGGG---SCEEEEEGGGCC-SCEEEEEECSCCCC----CSCC
T ss_pred hHHHHHHHHHHHhcCCCeEEE-E--ECCHHHHHHHHHHhhcc---CCeeEeeHHHhc-CCCCEEEEcCcCCCCCCCCCCC
Confidence 8899999999999997 5544 3 34666666655543221 012233333333 689999966543321110 1
Q ss_pred Hhccc-ceEEEecCCcch-HHHHHHHhccCCCccc-ccCc
Q psy8846 429 AHKIQ-AKIIAEAANESV-QESLERRFGNVGGRIP-VTPS 465 (568)
Q Consensus 429 a~~i~-AkiIvE~AN~~~-~~~l~~~l~~~GggI~-vvPd 465 (568)
...++ ..+|++-..+|. ++.|+ ..+++| +. ++.-
T Consensus 208 ~~~l~~~~~V~DlvY~P~~T~ll~-~A~~~G--~~~~~~G 244 (281)
T 3o8q_A 208 PVIFSSRSVCYDMMYGKGYTVFNQ-WARQHG--CAQAIDG 244 (281)
T ss_dssp GGGEEEEEEEEESCCCSSCCHHHH-HHHHTT--CSEEECT
T ss_pred HHHhCcCCEEEEecCCCccCHHHH-HHHHCC--CCEEECc
Confidence 12333 568899987774 34443 234443 44 4444
No 164
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=45.03 E-value=96 Score=30.76 Aligned_cols=97 Identities=11% Similarity=0.077 Sum_probs=56.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccC-----CCChh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEK-----VITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~-----~It~~ 427 (568)
|.+|+.++..|.+.|++|+.+ +. +.++..+.. +.| .+.++.+++- ++||+|=|---+ .+..+
T Consensus 127 GGaaraia~~L~~~G~~v~V~-nR--t~~ka~~la-~~~-------~~~~~~~~l~--~~DiVInaTp~Gm~~~~~l~~~ 193 (269)
T 3phh_A 127 GGSAKALACELKKQGLQVSVL-NR--SSRGLDFFQ-RLG-------CDCFMEPPKS--AFDLIINATSASLHNELPLNKE 193 (269)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE-CS--SCTTHHHHH-HHT-------CEEESSCCSS--CCSEEEECCTTCCCCSCSSCHH
T ss_pred CHHHHHHHHHHHHCCCEEEEE-eC--CHHHHHHHH-HCC-------CeEecHHHhc--cCCEEEEcccCCCCCCCCCChH
Confidence 999999999999999776553 34 333333333 322 3333444443 899999543222 45554
Q ss_pred hHh-cc-cceEEEecCCcchHHHHHHHhccCCCcccccCc
Q psy8846 428 NAH-KI-QAKIIAEAANESVQESLERRFGNVGGRIPVTPS 465 (568)
Q Consensus 428 na~-~i-~AkiIvE~AN~~~~~~l~~~l~~~GggI~vvPd 465 (568)
-.. .+ +..+|++-..+| ...+-+..+++| +.+++-
T Consensus 194 ~l~~~l~~~~~v~D~vY~P-~T~ll~~A~~~G--~~~~~G 230 (269)
T 3phh_A 194 VLKGYFKEGKLAYDLAYGF-LTPFLSLAKELK--TPFQDG 230 (269)
T ss_dssp HHHHHHHHCSEEEESCCSS-CCHHHHHHHHTT--CCEECS
T ss_pred HHHhhCCCCCEEEEeCCCC-chHHHHHHHHCc--CEEECC
Confidence 221 23 357899999888 433333334554 555555
No 165
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=44.87 E-value=14 Score=35.96 Aligned_cols=22 Identities=0% Similarity=-0.206 Sum_probs=19.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.+.
T Consensus 43 ~GIG~aia~~la~~G~~V~~~~ 64 (275)
T 4imr_A 43 RGIGAAIAEGLAGAGAHVILHG 64 (275)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEc
Confidence 7899999999999999988754
No 166
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=44.83 E-value=6.8 Score=37.81 Aligned_cols=33 Identities=9% Similarity=-0.221 Sum_probs=26.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|-+|+++|+.|++.|++|+.+ +.+.+.+.+..+
T Consensus 17 ~gIG~~ia~~l~~~G~~V~~~---~r~~~~~~~~~~ 49 (260)
T 1nff_A 17 RGMGASHVRAMVAEGAKVVFG---DILDEEGKAMAA 49 (260)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHH
Confidence 789999999999999999884 356666655444
No 167
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=44.79 E-value=5.3 Score=37.74 Aligned_cols=31 Identities=3% Similarity=-0.101 Sum_probs=24.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEY 386 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~ 386 (568)
|.+|+++++.|.+.|++|+++. .+.+.+.+.
T Consensus 21 ggiG~~la~~l~~~G~~V~~~~---r~~~~~~~~ 51 (255)
T 1fmc_A 21 AGIGKEIAITFATAGASVVVSD---INADAANHV 51 (255)
T ss_dssp SHHHHHHHHHHHTTTCEEEEEE---SCHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEEc---CCHHHHHHH
Confidence 7899999999999999998853 455555443
No 168
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=44.44 E-value=5.2 Score=35.50 Aligned_cols=22 Identities=5% Similarity=0.040 Sum_probs=20.2
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|.+|..+|+.|.+.|++|+++.
T Consensus 28 G~iG~~la~~L~~~g~~V~vid 49 (155)
T 2g1u_A 28 GRLGSLIANLASSSGHSVVVVD 49 (155)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHhCCCeEEEEE
Confidence 9999999999999999988853
No 169
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=44.39 E-value=7.3 Score=36.58 Aligned_cols=31 Identities=0% Similarity=-0.185 Sum_probs=24.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEY 386 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~ 386 (568)
|-+|+++|+.|.+.|++|+++. .+.+.+.+.
T Consensus 17 ggiG~~la~~l~~~G~~V~~~~---r~~~~~~~~ 47 (248)
T 2pnf_A 17 RGIGRAIAEKLASAGSTVIITG---TSGERAKAV 47 (248)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE---SSHHHHHHH
T ss_pred chHHHHHHHHHHHCCCEEEEEe---CChHHHHHH
Confidence 8899999999999999998853 455555443
No 170
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=44.39 E-value=54 Score=32.01 Aligned_cols=85 Identities=7% Similarity=-0.006 Sum_probs=49.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCC------CCh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKV------ITK 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~------It~ 426 (568)
|.+|..++..|.+.|++|+.+ +-+.+++.+..++.+. +......+.+++-..++||+|-|+--+. |..
T Consensus 128 Gg~g~a~a~~L~~~G~~v~v~---~R~~~~a~~l~~~~~~---~~~~~~~~~~~~~~~~~DivIn~t~~~~~~~~~~i~~ 201 (272)
T 1p77_A 128 GGATKGVLLPLLQAQQNIVLA---NRTFSKTKELAERFQP---YGNIQAVSMDSIPLQTYDLVINATSAGLSGGTASVDA 201 (272)
T ss_dssp SHHHHTTHHHHHHTTCEEEEE---ESSHHHHHHHHHHHGG---GSCEEEEEGGGCCCSCCSEEEECCCC-------CCCH
T ss_pred cHHHHHHHHHHHHCCCEEEEE---ECCHHHHHHHHHHccc---cCCeEEeeHHHhccCCCCEEEECCCCCCCCCCCCCCH
Confidence 889999999999999887763 4577776666554321 0011112222221137999998876443 222
Q ss_pred hhHhcccceEEEecCCcch
Q psy8846 427 NNAHKIQAKIIAEAANESV 445 (568)
Q Consensus 427 ~na~~i~AkiIvE~AN~~~ 445 (568)
+... ...+|++-..+|.
T Consensus 202 ~~l~--~~~~v~D~~y~p~ 218 (272)
T 1p77_A 202 EILK--LGSAFYDMQYAKG 218 (272)
T ss_dssp HHHH--HCSCEEESCCCTT
T ss_pred HHcC--CCCEEEEeeCCCC
Confidence 2111 2467888877764
No 171
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=44.31 E-value=26 Score=33.88 Aligned_cols=83 Identities=11% Similarity=0.012 Sum_probs=50.1
Q ss_pred cCHHHHHHHHHHHCCC--eEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeeccccCCCChhhH
Q psy8846 353 GPVSMYLPQIWVQEKG--KCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAAVEKVITKNNA 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~Ga--kvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaAl~~~It~~na 429 (568)
|++|..+|+.|.+.|. +|++ .+.+.+.+.... +.|-.. ... +.++.+..+|||++-|.-... +.+.+
T Consensus 10 G~mG~~~a~~l~~~g~~~~V~~---~d~~~~~~~~~~-~~g~~~-----~~~~~~~~~~~~~aDvVilavp~~~-~~~v~ 79 (281)
T 2g5c_A 10 GFMGGSFAKSLRRSGFKGKIYG---YDINPESISKAV-DLGIID-----EGTTSIAKVEDFSPDFVMLSSPVRT-FREIA 79 (281)
T ss_dssp SHHHHHHHHHHHHTTCCSEEEE---ECSCHHHHHHHH-HTTSCS-----EEESCGGGGGGTCCSEEEECSCHHH-HHHHH
T ss_pred CHHHHHHHHHHHhcCCCcEEEE---EeCCHHHHHHHH-HCCCcc-----cccCCHHHHhcCCCCEEEEcCCHHH-HHHHH
Confidence 9999999999999998 7776 345777665543 333210 111 222333228999998865442 22333
Q ss_pred h----ccc-ceEEEecCCcch
Q psy8846 430 H----KIQ-AKIIAEAANESV 445 (568)
Q Consensus 430 ~----~i~-AkiIvE~AN~~~ 445 (568)
. .++ -.+|+..+|...
T Consensus 80 ~~l~~~l~~~~iv~~~~~~~~ 100 (281)
T 2g5c_A 80 KKLSYILSEDATVTDQGSVKG 100 (281)
T ss_dssp HHHHHHSCTTCEEEECCSCCT
T ss_pred HHHHhhCCCCcEEEECCCCcH
Confidence 3 232 358888888653
No 172
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=44.12 E-value=6.7 Score=37.01 Aligned_cols=33 Identities=12% Similarity=0.127 Sum_probs=25.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|.+|+++|+.|.+.|++|+.++ .+.+.+.+..+
T Consensus 12 ggiG~~~a~~l~~~G~~V~~~~---r~~~~~~~~~~ 44 (250)
T 2cfc_A 12 SGNGLAIATRFLARGDRVAALD---LSAETLEETAR 44 (250)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHH
T ss_pred chHHHHHHHHHHHCCCEEEEEe---CCHHHHHHHHH
Confidence 7899999999999999998853 45666655443
No 173
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=44.07 E-value=9.3 Score=35.92 Aligned_cols=34 Identities=9% Similarity=0.029 Sum_probs=26.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|-+|+++|+.|.+.|++|+++. .+.+.+.+..++
T Consensus 17 ggiG~~~a~~l~~~G~~V~~~~---r~~~~~~~~~~~ 50 (244)
T 3d3w_A 17 KGIGRGTVQALHATGARVVAVS---RTQADLDSLVRE 50 (244)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEEe---CCHHHHHHHHHH
Confidence 7899999999999999998853 466666655443
No 174
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=43.98 E-value=22 Score=34.75 Aligned_cols=22 Identities=18% Similarity=0.146 Sum_probs=20.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|+++++.|.+.|++|+++.
T Consensus 21 G~iG~~l~~~L~~~g~~V~~~~ 42 (342)
T 1y1p_A 21 GFVASHVVEQLLEHGYKVRGTA 42 (342)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred cHHHHHHHHHHHHCCCEEEEEe
Confidence 8999999999999999999865
No 175
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=43.92 E-value=7.8 Score=36.99 Aligned_cols=34 Identities=9% Similarity=0.008 Sum_probs=27.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|-+|.++|+.|.+.|++|+.+ +.+.+.+.+..++
T Consensus 15 ~giG~~ia~~l~~~G~~V~~~---~r~~~~~~~~~~~ 48 (245)
T 1uls_A 15 HGIGRATLELFAKEGARLVAC---DIEEGPLREAAEA 48 (245)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHH
Confidence 789999999999999999884 4567777666554
No 176
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=43.75 E-value=4.2 Score=38.77 Aligned_cols=22 Identities=9% Similarity=0.009 Sum_probs=20.2
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|.+|+++|+.|.+.|++|++++
T Consensus 22 ggiG~~~a~~l~~~G~~V~~~~ 43 (265)
T 2o23_A 22 SGLGLATAERLVGQGASAVLLD 43 (265)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred ChHHHHHHHHHHHCCCEEEEEe
Confidence 7899999999999999998864
No 177
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=43.09 E-value=27 Score=33.61 Aligned_cols=22 Identities=5% Similarity=-0.000 Sum_probs=20.2
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|+++|+.|++.|++|+.++
T Consensus 38 ~gIG~aia~~l~~~G~~V~~~~ 59 (260)
T 3un1_A 38 QGIGAGLVRAYRDRNYRVVATS 59 (260)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEe
Confidence 7899999999999999999865
No 178
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=42.96 E-value=3.2 Score=39.93 Aligned_cols=22 Identities=18% Similarity=0.256 Sum_probs=19.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.+.
T Consensus 17 ~gIG~aia~~l~~~G~~V~~~~ 38 (257)
T 3tpc_A 17 SGLGAAVTRMLAQEGATVLGLD 38 (257)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEe
Confidence 6799999999999999998754
No 179
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=42.82 E-value=8.2 Score=37.06 Aligned_cols=31 Identities=13% Similarity=0.139 Sum_probs=24.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEY 386 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~ 386 (568)
|-+|.++|+.|.+.|++|+.+ +.+.+.+.+.
T Consensus 17 ~gIG~~ia~~l~~~G~~V~~~---~r~~~~~~~~ 47 (263)
T 3ai3_A 17 SGIGLAIAEGFAKEGAHIVLV---ARQVDRLHEA 47 (263)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHH
T ss_pred chHHHHHHHHHHHCCCEEEEE---cCCHHHHHHH
Confidence 789999999999999999885 3456555543
No 180
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=42.66 E-value=9.9 Score=35.64 Aligned_cols=34 Identities=9% Similarity=-0.013 Sum_probs=26.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|-+|+++|+.|.+.|++|++++ .+.+.+.+..++
T Consensus 17 ggiG~~~a~~l~~~G~~V~~~~---r~~~~~~~~~~~ 50 (244)
T 1cyd_A 17 KGIGRDTVKALHASGAKVVAVT---RTNSDLVSLAKE 50 (244)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHCCCEEEEEe---CCHHHHHHHHHh
Confidence 8899999999999999998853 456666655443
No 181
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=42.57 E-value=10 Score=39.32 Aligned_cols=83 Identities=12% Similarity=0.127 Sum_probs=49.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCc--ccCCCCeecCCCCcccccceEEeecccc------CCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTI--VGFPGAVPYEGENLMYEPCDIFVPAAVE------KVI 424 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v--~~~~ga~~i~~~~ll~~~cDIliPaAl~------~~I 424 (568)
|.+|..+|+.+...|++|++ .+.+.+++....+..|.- ..+.... +-++++ ..+||++-|+.- ..|
T Consensus 177 G~iG~~~a~~a~~~Ga~V~~---~d~~~~~l~~~~~~~g~~~~~~~~~~~--~l~~~l-~~aDvVi~~~~~p~~~t~~li 250 (377)
T 2vhw_A 177 GTAGYNAARIANGMGATVTV---LDINIDKLRQLDAEFCGRIHTRYSSAY--ELEGAV-KRADLVIGAVLVPGAKAPKLV 250 (377)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---EESCHHHHHHHHHHTTTSSEEEECCHH--HHHHHH-HHCSEEEECCCCTTSCCCCCB
T ss_pred CHHHHHHHHHHHhCCCEEEE---EeCCHHHHHHHHHhcCCeeEeccCCHH--HHHHHH-cCCCEEEECCCcCCCCCccee
Confidence 99999999999999999887 345777766655443311 0000000 111222 379999987642 345
Q ss_pred ChhhHhcccc-eEEEecC
Q psy8846 425 TKNNAHKIQA-KIIAEAA 441 (568)
Q Consensus 425 t~~na~~i~A-kiIvE~A 441 (568)
+.+-.+.++- .+|+.-+
T Consensus 251 ~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 251 SNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CHHHHTTSCTTCEEEEGG
T ss_pred cHHHHhcCCCCcEEEEEe
Confidence 7777776652 3444433
No 182
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=42.41 E-value=8.8 Score=37.31 Aligned_cols=34 Identities=3% Similarity=-0.002 Sum_probs=27.2
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..++
T Consensus 19 ~gIG~~ia~~l~~~G~~V~~~---~r~~~~~~~~~~~ 52 (270)
T 1yde_A 19 RGIGAGIVRAFVNSGARVVIC---DKDESGGRALEQE 52 (270)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHH
Confidence 789999999999999999884 4567766665554
No 183
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=42.12 E-value=18 Score=35.81 Aligned_cols=80 Identities=13% Similarity=0.115 Sum_probs=47.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC-CCCcccccceEEeeccccCCCChhhH--
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE-GENLMYEPCDIFVPAAVEKVITKNNA-- 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~-~~~ll~~~cDIliPaAl~~~It~~na-- 429 (568)
|++|..+|+.|.+.|.+|+. .| .+.+.+.+..+. |....+ .++.+ .+||+++-|.-...-..+.+
T Consensus 39 G~mG~~~a~~l~~~g~~V~~-~~--~~~~~~~~~~~~--------g~~~~~~~~~~~-~~~DvVi~av~~~~~~~~v~~~ 106 (316)
T 2uyy_A 39 GLMGSGIVSNLLKMGHTVTV-WN--RTAEKCDLFIQE--------GARLGRTPAEVV-STCDITFACVSDPKAAKDLVLG 106 (316)
T ss_dssp SHHHHHHHHHHHHTTCCEEE-EC--SSGGGGHHHHHT--------TCEECSCHHHHH-HHCSEEEECCSSHHHHHHHHHS
T ss_pred cHHHHHHHHHHHhCCCEEEE-Ee--CCHHHHHHHHHc--------CCEEcCCHHHHH-hcCCEEEEeCCCHHHHHHHHcC
Confidence 99999999999999998765 33 344444444332 222221 12333 37999998765332223322
Q ss_pred -----hcc-cceEEEecCCcc
Q psy8846 430 -----HKI-QAKIIAEAANES 444 (568)
Q Consensus 430 -----~~i-~AkiIvE~AN~~ 444 (568)
+.+ +-++|+..+|..
T Consensus 107 ~~~~~~~l~~~~~vv~~s~~~ 127 (316)
T 2uyy_A 107 PSGVLQGIRPGKCYVDMSTVD 127 (316)
T ss_dssp TTCGGGGCCTTCEEEECSCCC
T ss_pred chhHhhcCCCCCEEEECCCCC
Confidence 223 246888888865
No 184
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=42.09 E-value=13 Score=36.49 Aligned_cols=23 Identities=4% Similarity=-0.182 Sum_probs=20.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPT 375 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD 375 (568)
|-+|+++++.|.+.|++|+++.-
T Consensus 15 G~iG~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 15 GYIGSHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECC
T ss_pred cHHHHHHHHHHHHCCCcEEEEec
Confidence 88999999999999999998753
No 185
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=42.06 E-value=17 Score=36.80 Aligned_cols=78 Identities=14% Similarity=0.104 Sum_probs=51.8
Q ss_pred cCHHHHHHHHHHHC-CCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCccc-ccceEEeeccccCCCChhhHh
Q psy8846 353 GPVSMYLPQIWVQE-KGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMY-EPCDIFVPAAVEKVITKNNAH 430 (568)
Q Consensus 353 GnVG~~~A~~L~~~-GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~-~~cDIliPaAl~~~It~~na~ 430 (568)
|++|...++.|.+. |+++++|+|. |.+.+.+..++.|- ..|. +.++++. .++|+++-| +.+..+.+.+.
T Consensus 14 G~~g~~~~~~l~~~~~~~lvav~d~--~~~~~~~~~~~~g~-~~~~-----~~~~~l~~~~~D~V~i~-tp~~~h~~~~~ 84 (354)
T 3db2_A 14 GRWAYVMADAYTKSEKLKLVTCYSR--TEDKREKFGKRYNC-AGDA-----TMEALLAREDVEMVIIT-VPNDKHAEVIE 84 (354)
T ss_dssp SHHHHHHHHHHTTCSSEEEEEEECS--SHHHHHHHHHHHTC-CCCS-----SHHHHHHCSSCCEEEEC-SCTTSHHHHHH
T ss_pred CHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHHHcCC-CCcC-----CHHHHhcCCCCCEEEEe-CChHHHHHHHH
Confidence 89999999999886 8999999876 77777777666531 1121 2245663 578988876 45555555544
Q ss_pred cc---cceEEEe
Q psy8846 431 KI---QAKIIAE 439 (568)
Q Consensus 431 ~i---~AkiIvE 439 (568)
.. ...++||
T Consensus 85 ~al~~gk~vl~E 96 (354)
T 3db2_A 85 QCARSGKHIYVE 96 (354)
T ss_dssp HHHHTTCEEEEE
T ss_pred HHHHcCCEEEEc
Confidence 32 2357777
No 186
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=41.93 E-value=11 Score=36.23 Aligned_cols=32 Identities=9% Similarity=-0.131 Sum_probs=24.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCC-CHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTR-KPLALEEYK 387 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~Gi-D~~~L~~~~ 387 (568)
|-+|.++|+.|++.|++|+.++ . +.+.+.+..
T Consensus 21 ~gIG~~ia~~l~~~G~~V~~~~---r~~~~~~~~~~ 53 (276)
T 1mxh_A 21 RRIGHSIAVRLHQQGFRVVVHY---RHSEGAAQRLV 53 (276)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE---SSCHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEEe---CCChHHHHHHH
Confidence 7899999999999999998853 4 555555443
No 187
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=41.82 E-value=6.6 Score=37.21 Aligned_cols=31 Identities=6% Similarity=0.160 Sum_probs=24.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEY 386 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~ 386 (568)
|-+|+++|+.|++.|++|+.+. .+.+.+.+.
T Consensus 15 ~gIG~~~a~~l~~~G~~v~~~~---r~~~~~~~~ 45 (247)
T 3lyl_A 15 RGIGFEVAHALASKGATVVGTA---TSQASAEKF 45 (247)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE---SSHHHHHHH
T ss_pred ChHHHHHHHHHHHCCCEEEEEe---CCHHHHHHH
Confidence 7899999999999999998854 455555443
No 188
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=41.70 E-value=28 Score=33.76 Aligned_cols=35 Identities=11% Similarity=0.172 Sum_probs=27.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|.||...++.|.+.||+|+.|+.. ++ +.+.+..++
T Consensus 40 G~va~~ka~~Ll~~GA~VtVvap~-~~-~~l~~l~~~ 74 (223)
T 3dfz_A 40 GTIATRRIKGFLQEGAAITVVAPT-VS-AEINEWEAK 74 (223)
T ss_dssp SHHHHHHHHHHGGGCCCEEEECSS-CC-HHHHHHHHT
T ss_pred CHHHHHHHHHHHHCCCEEEEECCC-CC-HHHHHHHHc
Confidence 999999999999999999988753 44 345555443
No 189
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=41.62 E-value=16 Score=35.34 Aligned_cols=22 Identities=5% Similarity=-0.096 Sum_probs=19.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.++
T Consensus 18 ~gIG~~~a~~l~~~G~~V~~~~ 39 (275)
T 2pd4_A 18 KSIAYGIAQSCFNQGATLAFTY 39 (275)
T ss_dssp TSHHHHHHHHHHTTTCEEEEEE
T ss_pred CcHHHHHHHHHHHCCCEEEEEe
Confidence 4799999999999999998864
No 190
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=41.35 E-value=68 Score=33.28 Aligned_cols=86 Identities=14% Similarity=0.183 Sum_probs=54.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCccc-CCCC------------eec------CCC--Cccccc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVG-FPGA------------VPY------EGE--NLMYEP 411 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~-~~ga------------~~i------~~~--~ll~~~ 411 (568)
|..|+.++|.+.+.|.+||+|.|.-+|.+.+. |.-++.|+-| |++. +.| +++ .|=++.
T Consensus 16 GRIGrlv~R~~~~~~veivainDp~~d~~~~a-~l~~yDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~dp~~i~W~~~g 94 (346)
T 3h9e_O 16 GRIGRLVLRACMEKGVKVVAVNDPFIDPEYMV-YMFKYDSTHGRYKGSVEFRNGQLVVDNHEISVYQCKEPKQIPWRAVG 94 (346)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEECTTCCHHHHH-HHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGGCCGGGGT
T ss_pred ChHHHHHHHHHHhCCCEEEEEeCCCCChhHhc-ccccccCCCCCCCCcEEEcCCEEEECCEEEEEEecCChhhCCccccc
Confidence 99999999999999999999999767887654 4444444433 3321 111 111 122357
Q ss_pred ceEEeeccccCCCChhhHhc-cc--c-eEEEec
Q psy8846 412 CDIFVPAAVEKVITKNNAHK-IQ--A-KIIAEA 440 (568)
Q Consensus 412 cDIliPaAl~~~It~~na~~-i~--A-kiIvE~ 440 (568)
+|+.+=|+ +.-.+.+-|+. ++ | |+|+.+
T Consensus 95 vDiVlesT-G~f~s~e~a~~hl~aGAkkVVIsa 126 (346)
T 3h9e_O 95 SPYVVEST-GVYLSIQAASDHISAGAQRVVISA 126 (346)
T ss_dssp SCEEEECS-SSCCSHHHHHHHHHTTCSEEEESS
T ss_pred ccEEEEec-cccCCHHHHHHHHHcCCCEEEECC
Confidence 88888775 45567776663 32 4 355543
No 191
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=41.22 E-value=20 Score=35.97 Aligned_cols=78 Identities=12% Similarity=0.115 Sum_probs=51.7
Q ss_pred cCHHHHHHHHHHHC-CCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccc-cceEEeeccccCCCChhhH
Q psy8846 353 GPVSMYLPQIWVQE-KGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYE-PCDIFVPAAVEKVITKNNA 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~-GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~-~cDIliPaAl~~~It~~na 429 (568)
|++|...++.|.+. ++++++|+|. |.+.+.+..++.|. ...+ +.++++.. ++|+++-|. .+..+.+.+
T Consensus 11 G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~~~~~------~~~~~~~~~ll~~~~~D~V~i~t-p~~~h~~~~ 81 (344)
T 3ezy_A 11 GRIGTIHAENLKMIDDAILYAISDV--REDRLREMKEKLGV------EKAYKDPHELIEDPNVDAVLVCS-STNTHSELV 81 (344)
T ss_dssp SHHHHHHHHHGGGSTTEEEEEEECS--CHHHHHHHHHHHTC------SEEESSHHHHHHCTTCCEEEECS-CGGGHHHHH
T ss_pred CHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHHHhCC------CceeCCHHHHhcCCCCCEEEEcC-CCcchHHHH
Confidence 89999999988874 8999999876 77777777666542 1222 23456653 799988764 444455444
Q ss_pred hcc---cceEEEe
Q psy8846 430 HKI---QAKIIAE 439 (568)
Q Consensus 430 ~~i---~AkiIvE 439 (568)
... ...++||
T Consensus 82 ~~al~~gk~v~~E 94 (344)
T 3ezy_A 82 IACAKAKKHVFCE 94 (344)
T ss_dssp HHHHHTTCEEEEE
T ss_pred HHHHhcCCeEEEE
Confidence 332 2457888
No 192
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=41.19 E-value=7 Score=37.08 Aligned_cols=30 Identities=0% Similarity=-0.129 Sum_probs=23.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEE 385 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~ 385 (568)
|.+|+++|+.|.+.|++|++++ .+.+.+.+
T Consensus 23 ggiG~~la~~l~~~G~~V~~~~---r~~~~~~~ 52 (260)
T 3awd_A 23 QNIGLACVTALAEAGARVIIAD---LDEAMATK 52 (260)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE---SCHHHHHH
T ss_pred chHHHHHHHHHHHCCCEEEEEe---CCHHHHHH
Confidence 8899999999999999998854 45554443
No 193
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=41.10 E-value=15 Score=37.88 Aligned_cols=79 Identities=10% Similarity=-0.018 Sum_probs=48.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccc---cceEEeeccccCCCChhh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYE---PCDIFVPAAVEKVITKNN 428 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~---~cDIliPaAl~~~It~~n 428 (568)
|++|..+|+.|.+.|.+|++ .+.+.+.+....+. |+... +.++++.. +||+++-|.-... ..+.
T Consensus 17 G~mG~slA~~L~~~G~~V~~---~dr~~~~~~~a~~~--------G~~~~~~~~e~~~~a~~~aDlVilavP~~~-~~~v 84 (341)
T 3ktd_A 17 GLIGGSLLRDLHAANHSVFG---YNRSRSGAKSAVDE--------GFDVSADLEATLQRAAAEDALIVLAVPMTA-IDSL 84 (341)
T ss_dssp SHHHHHHHHHHHHTTCCEEE---ECSCHHHHHHHHHT--------TCCEESCHHHHHHHHHHTTCEEEECSCHHH-HHHH
T ss_pred cHHHHHHHHHHHHCCCEEEE---EeCCHHHHHHHHHc--------CCeeeCCHHHHHHhcccCCCEEEEeCCHHH-HHHH
Confidence 99999999999999999887 45677777665443 22222 22334432 5899998865332 2333
Q ss_pred Hhcc----cceEEEecCCc
Q psy8846 429 AHKI----QAKIIAEAANE 443 (568)
Q Consensus 429 a~~i----~AkiIvE~AN~ 443 (568)
...+ .-.+|+..+..
T Consensus 85 l~~l~~~~~~~iv~Dv~Sv 103 (341)
T 3ktd_A 85 LDAVHTHAPNNGFTDVVSV 103 (341)
T ss_dssp HHHHHHHCTTCCEEECCSC
T ss_pred HHHHHccCCCCEEEEcCCC
Confidence 3333 23467666553
No 194
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=40.68 E-value=18 Score=34.59 Aligned_cols=35 Identities=6% Similarity=-0.087 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 355 VSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 355 VG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
+|.++|+.|++.|++|+.+.-..-..+.+.+...+
T Consensus 21 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 55 (266)
T 3oig_A 21 IAWGIARSLHEAGARLIFTYAGERLEKSVHELAGT 55 (266)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHh
Confidence 99999999999999998864332223444444444
No 195
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=40.68 E-value=33 Score=32.07 Aligned_cols=33 Identities=15% Similarity=0.020 Sum_probs=25.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|.+|+++|+.|.+.|++|+.++ .+.+.+.+..+
T Consensus 16 ggiG~~~a~~l~~~G~~V~~~~---r~~~~~~~~~~ 48 (251)
T 1zk4_A 16 LGIGLAIATKFVEEGAKVMITG---RHSDVGEKAAK 48 (251)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHCCCEEEEEe---CCHHHHHHHHH
Confidence 7899999999999999998853 46666655443
No 196
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=40.50 E-value=6.6 Score=36.40 Aligned_cols=85 Identities=18% Similarity=0.128 Sum_probs=49.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCCCChhhHhcc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKI 432 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~It~~na~~i 432 (568)
|++|+.+++.|.+.|.+|+.+ +.+.+.+.+..++.+....-.....-+.++.+ .+||+++-|.-...+ .+.+..+
T Consensus 10 G~~G~~ia~~l~~~g~~V~~~---~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~D~Vi~~~~~~~~-~~~~~~l 84 (212)
T 1jay_A 10 GNLGKGLALRLATLGHEIVVG---SRREEKAEAKAAEYRRIAGDASITGMKNEDAA-EACDIAVLTIPWEHA-IDTARDL 84 (212)
T ss_dssp SHHHHHHHHHHHTTTCEEEEE---ESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHH-HHCSEEEECSCHHHH-HHHHHHT
T ss_pred CHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHHhccccccCCCChhhHHHHH-hcCCEEEEeCChhhH-HHHHHHH
Confidence 899999999999999998774 34566655544432210000001111111222 479999988765442 2333333
Q ss_pred ----cceEEEecCC
Q psy8846 433 ----QAKIIAEAAN 442 (568)
Q Consensus 433 ----~AkiIvE~AN 442 (568)
+-++|+..+|
T Consensus 85 ~~~~~~~~vi~~~~ 98 (212)
T 1jay_A 85 KNILREKIVVSPLV 98 (212)
T ss_dssp HHHHTTSEEEECCC
T ss_pred HHHcCCCEEEEcCC
Confidence 3568888888
No 197
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=40.36 E-value=33 Score=33.46 Aligned_cols=34 Identities=12% Similarity=0.034 Sum_probs=27.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..++
T Consensus 38 ~GIG~aia~~la~~G~~V~~~---~r~~~~~~~~~~~ 71 (283)
T 3v8b_A 38 SGIGRATALALAADGVTVGAL---GRTRTEVEEVADE 71 (283)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHH
Confidence 689999999999999999884 4567776665543
No 198
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=40.24 E-value=14 Score=36.07 Aligned_cols=22 Identities=5% Similarity=-0.013 Sum_probs=19.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.+.
T Consensus 33 ~gIG~~ia~~l~~~G~~V~~~~ 54 (285)
T 2p91_A 33 RSIAYGIAKSFHREGAQLAFTY 54 (285)
T ss_dssp TSHHHHHHHHHHHTTCEEEEEE
T ss_pred CcHHHHHHHHHHHcCCEEEEEe
Confidence 3699999999999999998864
No 199
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=40.11 E-value=39 Score=34.49 Aligned_cols=86 Identities=10% Similarity=0.093 Sum_probs=54.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC-CCCcccccceEEeecc-----ccCCCCh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE-GENLMYEPCDIFVPAA-----VEKVITK 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~-~~~ll~~~cDIliPaA-----l~~~It~ 426 (568)
|++|..+|+.|...|.+|++.. . +.+. . .+....+ .++++ .+|||++-|. ..+.|++
T Consensus 173 G~iG~~vA~~l~~~G~~V~~~d-r--~~~~----------~---~g~~~~~~l~ell-~~aDvVil~vP~~~~t~~li~~ 235 (333)
T 3ba1_A 173 GRIGLAVAERAEAFDCPISYFS-R--SKKP----------N---TNYTYYGSVVELA-SNSDILVVACPLTPETTHIINR 235 (333)
T ss_dssp SHHHHHHHHHHHTTTCCEEEEC-S--SCCT----------T---CCSEEESCHHHHH-HTCSEEEECSCCCGGGTTCBCH
T ss_pred CHHHHHHHHHHHHCCCEEEEEC-C--Cchh----------c---cCceecCCHHHHH-hcCCEEEEecCCChHHHHHhhH
Confidence 9999999999999999988743 2 1110 0 0222222 22333 4899998875 4567877
Q ss_pred hhHhccc-ceEEEecCCcch--HHHHHHHhcc
Q psy8846 427 NNAHKIQ-AKIIAEAANESV--QESLERRFGN 455 (568)
Q Consensus 427 ~na~~i~-AkiIvE~AN~~~--~~~l~~~l~~ 455 (568)
+....++ -.+|+..+.++. .+.|.+.|.+
T Consensus 236 ~~l~~mk~gailIn~srG~~vd~~aL~~aL~~ 267 (333)
T 3ba1_A 236 EVIDALGPKGVLINIGRGPHVDEPELVSALVE 267 (333)
T ss_dssp HHHHHHCTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred HHHhcCCCCCEEEECCCCchhCHHHHHHHHHc
Confidence 7777775 457888888764 2345554443
No 200
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=40.11 E-value=5.3 Score=38.89 Aligned_cols=22 Identities=5% Similarity=0.111 Sum_probs=19.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.+.
T Consensus 21 ~gIG~aia~~l~~~G~~V~~~~ 42 (271)
T 3tzq_B 21 GGIGLETSRVLARAGARVVLAD 42 (271)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred cHHHHHHHHHHHHCCCEEEEEc
Confidence 6799999999999999988754
No 201
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=39.99 E-value=22 Score=36.43 Aligned_cols=87 Identities=13% Similarity=0.175 Sum_probs=58.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeecc-----ccCCCChh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAA-----VEKVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaA-----l~~~It~~ 427 (568)
|++|+.+|+.+...|++|++.. .--.. . . .+ .+.+..+-+++| ..|||++-+. ..+.|+++
T Consensus 150 G~IG~~va~~~~~fg~~v~~~d-~~~~~-~---~-~~-------~~~~~~~l~ell-~~sDivslh~Plt~~T~~li~~~ 215 (334)
T 3kb6_A 150 GRIGSRVAMYGLAFGMKVLCYD-VVKRE-D---L-KE-------KGCVYTSLDELL-KESDVISLHVPYTKETHHMINEE 215 (334)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEC-SSCCH-H---H-HH-------TTCEECCHHHHH-HHCSEEEECCCCCTTTTTCBCHH
T ss_pred chHHHHHHHhhcccCceeeecC-Cccch-h---h-hh-------cCceecCHHHHH-hhCCEEEEcCCCChhhccCcCHH
Confidence 9999999999999999999853 21111 1 1 11 133444445665 4799998875 45688999
Q ss_pred hHhccc-ceEEEecCCcch--HHHHHHHh
Q psy8846 428 NAHKIQ-AKIIAEAANESV--QESLERRF 453 (568)
Q Consensus 428 na~~i~-AkiIvE~AN~~~--~~~l~~~l 453 (568)
...++| -.+++..|-+++ .+.|.+.|
T Consensus 216 ~l~~mk~~a~lIN~aRG~iVde~aL~~aL 244 (334)
T 3kb6_A 216 RISLMKDGVYLINTARGKVVDTDALYRAY 244 (334)
T ss_dssp HHHHSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred HHhhcCCCeEEEecCccccccHHHHHHHH
Confidence 888886 457888888885 33444444
No 202
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=39.94 E-value=16 Score=35.53 Aligned_cols=80 Identities=10% Similarity=0.084 Sum_probs=47.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC-CCCcccccceEEeeccccCCCChhhHh-
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE-GENLMYEPCDIFVPAAVEKVITKNNAH- 430 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~-~~~ll~~~cDIliPaAl~~~It~~na~- 430 (568)
|++|..+|+.|.+.|.+|+. . +.+.+.+.+..+. |.+..+ .++++ .+|||++-|.-...-..+-+.
T Consensus 9 G~mG~~~a~~l~~~g~~V~~-~--~~~~~~~~~~~~~--------g~~~~~~~~~~~-~~~Dvvi~~vp~~~~~~~v~~~ 76 (296)
T 2gf2_A 9 GNMGNPMAKNLMKHGYPLII-Y--DVFPDACKEFQDA--------GEQVVSSPADVA-EKADRIITMLPTSINAIEAYSG 76 (296)
T ss_dssp STTHHHHHHHHHHTTCCEEE-E--CSSTHHHHHHHTT--------TCEECSSHHHHH-HHCSEEEECCSSHHHHHHHHHS
T ss_pred cHHHHHHHHHHHHCCCEEEE-E--eCCHHHHHHHHHc--------CCeecCCHHHHH-hcCCEEEEeCCCHHHHHHHHhC
Confidence 99999999999999998776 3 3466666555432 222222 22333 379999988533222222222
Q ss_pred ------ccc-ceEEEecCCcc
Q psy8846 431 ------KIQ-AKIIAEAANES 444 (568)
Q Consensus 431 ------~i~-AkiIvE~AN~~ 444 (568)
.++ -++|+..+..+
T Consensus 77 ~~~~~~~l~~~~~vv~~s~~~ 97 (296)
T 2gf2_A 77 ANGILKKVKKGSLLIDSSTID 97 (296)
T ss_dssp TTSGGGTCCTTCEEEECSCCC
T ss_pred chhHHhcCCCCCEEEECCCCC
Confidence 232 45888844433
No 203
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=39.24 E-value=18 Score=35.50 Aligned_cols=26 Identities=4% Similarity=0.028 Sum_probs=23.5
Q ss_pred eeec----cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 349 KFSS----GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 349 R~~~----GnVG~~~A~~L~~~GakvvaVs 374 (568)
||+. |..|+++|+.|.++||+|+.|+
T Consensus 21 R~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~ 50 (232)
T 2gk4_A 21 RSITNHSTGHLGKIITETLLSAGYEVCLIT 50 (232)
T ss_dssp EEEEECCCCHHHHHHHHHHHHTTCEEEEEE
T ss_pred eeccCCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 6664 9999999999999999999876
No 204
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=39.03 E-value=14 Score=35.46 Aligned_cols=33 Identities=9% Similarity=0.050 Sum_probs=24.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEE 385 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~ 385 (568)
|.+|.++|+.|++.|++|+.++-..-..+.+.+
T Consensus 44 ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 76 (279)
T 3ctm_A 44 GGIGWAVAEAYAQAGADVAIWYNSHPADEKAEH 76 (279)
T ss_dssp SSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 899999999999999999886533223344443
No 205
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=38.95 E-value=12 Score=35.95 Aligned_cols=22 Identities=0% Similarity=-0.112 Sum_probs=19.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.+.
T Consensus 20 ~gIG~~ia~~l~~~G~~V~~~~ 41 (261)
T 2wyu_A 20 RSLGFAIAAKLKEAGAEVALSY 41 (261)
T ss_dssp SSHHHHHHHHHHHHTCEEEEEE
T ss_pred CcHHHHHHHHHHHCCCEEEEEc
Confidence 4699999999999999998854
No 206
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=38.70 E-value=10 Score=36.66 Aligned_cols=21 Identities=0% Similarity=0.039 Sum_probs=19.2
Q ss_pred cCHHHHHHHHHHHCCCeEeEe
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGL 373 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaV 373 (568)
|-+|.++|+.|++.|++|+.+
T Consensus 19 ~gIG~aia~~l~~~G~~V~~~ 39 (269)
T 2h7i_A 19 SSIAFHIARVAQEQGAQLVLT 39 (269)
T ss_dssp TSHHHHHHHHHHHTTCEEEEE
T ss_pred CchHHHHHHHHHHCCCEEEEE
Confidence 589999999999999998874
No 207
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=38.47 E-value=21 Score=36.05 Aligned_cols=77 Identities=12% Similarity=0.100 Sum_probs=52.1
Q ss_pred cCHHHHHHHHHHHC--CCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC-CCCccc-ccceEEeeccccCCCChhh
Q psy8846 353 GPVSMYLPQIWVQE--KGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE-GENLMY-EPCDIFVPAAVEKVITKNN 428 (568)
Q Consensus 353 GnVG~~~A~~L~~~--GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~-~~~ll~-~~cDIliPaAl~~~It~~n 428 (568)
|++|...++.|.+. |+++++|+|. |.+.+.+..++.| ...++ .++++. .++|+++-| +.+..+.+.
T Consensus 22 G~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~~~~~~-------~~~~~~~~~ll~~~~~D~V~i~-tp~~~h~~~ 91 (354)
T 3q2i_A 22 GRIANNHFGALEKHADRAELIDVCDI--DPAALKAAVERTG-------ARGHASLTDMLAQTDADIVILT-TPSGLHPTQ 91 (354)
T ss_dssp STTHHHHHHHHHHTTTTEEEEEEECS--SHHHHHHHHHHHC-------CEEESCHHHHHHHCCCSEEEEC-SCGGGHHHH
T ss_pred cHHHHHHHHHHHhCCCCeEEEEEEcC--CHHHHHHHHHHcC-------CceeCCHHHHhcCCCCCEEEEC-CCcHHHHHH
Confidence 99999999999886 8999999876 7777777777654 22232 345665 478988876 444455554
Q ss_pred Hhcc---cceEEEe
Q psy8846 429 AHKI---QAKIIAE 439 (568)
Q Consensus 429 a~~i---~AkiIvE 439 (568)
+... ...+++|
T Consensus 92 ~~~al~~gk~v~~E 105 (354)
T 3q2i_A 92 SIECSEAGFHVMTE 105 (354)
T ss_dssp HHHHHHTTCEEEEC
T ss_pred HHHHHHCCCCEEEe
Confidence 4432 2357776
No 208
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=38.25 E-value=45 Score=33.09 Aligned_cols=78 Identities=12% Similarity=0.036 Sum_probs=50.3
Q ss_pred cCHHH-HHHHHHHHC-CCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCCCChhhHh
Q psy8846 353 GPVSM-YLPQIWVQE-KGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAH 430 (568)
Q Consensus 353 GnVG~-~~A~~L~~~-GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~It~~na~ 430 (568)
|++|. +.++.|.+. |++++ |+|. |.+++.+..++.|.- . ...+..+.+..++|+++-|. .+..+.+.+.
T Consensus 11 G~ig~~~~~~~l~~~~~~~l~-v~d~--~~~~~~~~a~~~g~~-~----~~~~~~~~l~~~~D~V~i~t-p~~~h~~~~~ 81 (323)
T 1xea_A 11 GDIAQKAYLPVLAQWPDIELV-LCTR--NPKVLGTLATRYRVS-A----TCTDYRDVLQYGVDAVMIHA-ATDVHSTLAA 81 (323)
T ss_dssp CHHHHHTHHHHHTTSTTEEEE-EECS--CHHHHHHHHHHTTCC-C----CCSSTTGGGGGCCSEEEECS-CGGGHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCceEE-EEeC--CHHHHHHHHHHcCCC-c----cccCHHHHhhcCCCEEEEEC-CchhHHHHHH
Confidence 89998 478888764 78998 8765 777777776665421 0 02233445566899998874 4555555553
Q ss_pred -cccc--eEEEe
Q psy8846 431 -KIQA--KIIAE 439 (568)
Q Consensus 431 -~i~A--kiIvE 439 (568)
.+++ .+++|
T Consensus 82 ~al~~Gk~V~~E 93 (323)
T 1xea_A 82 FFLHLGIPTFVD 93 (323)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHHHCCCeEEEe
Confidence 3443 47887
No 209
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=38.20 E-value=18 Score=34.35 Aligned_cols=22 Identities=5% Similarity=-0.171 Sum_probs=20.1
Q ss_pred cCHHHHHHHHHHHCC---CeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEK---GKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~G---akvvaVs 374 (568)
|-+|+++|+.|++.| ++|+.++
T Consensus 31 ggIG~~la~~L~~~G~~~~~V~~~~ 55 (267)
T 1sny_A 31 RGLGLGLVKALLNLPQPPQHLFTTC 55 (267)
T ss_dssp SHHHHHHHHHHHTSSSCCSEEEEEE
T ss_pred CcHHHHHHHHHHhcCCCCcEEEEEe
Confidence 889999999999999 8998865
No 210
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=38.19 E-value=21 Score=35.87 Aligned_cols=77 Identities=9% Similarity=0.006 Sum_probs=51.3
Q ss_pred cCHHHHHHHHHHHC-CCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCccc-ccceEEeeccccCCCChhhH
Q psy8846 353 GPVSMYLPQIWVQE-KGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMY-EPCDIFVPAAVEKVITKNNA 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~-GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~-~~cDIliPaAl~~~It~~na 429 (568)
|++|...++.|.+. |+++++|+|. |.+.+.+..++.| ...+ +.++++. .++|+++-|. .+..+.+.+
T Consensus 13 G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~~~g-------~~~~~~~~~~l~~~~~D~V~i~t-p~~~h~~~~ 82 (344)
T 3euw_A 13 GRIGHVHAANIAANPDLELVVIADP--FIEGAQRLAEANG-------AEAVASPDEVFARDDIDGIVIGS-PTSTHVDLI 82 (344)
T ss_dssp SHHHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHHTTT-------CEEESSHHHHTTCSCCCEEEECS-CGGGHHHHH
T ss_pred cHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHHHcC-------CceeCCHHHHhcCCCCCEEEEeC-CchhhHHHH
Confidence 99999999999885 8999999875 7777777766654 2222 2345554 4789888774 444455544
Q ss_pred hcc---cceEEEe
Q psy8846 430 HKI---QAKIIAE 439 (568)
Q Consensus 430 ~~i---~AkiIvE 439 (568)
... ...+++|
T Consensus 83 ~~al~~gk~v~~E 95 (344)
T 3euw_A 83 TRAVERGIPALCE 95 (344)
T ss_dssp HHHHHTTCCEEEC
T ss_pred HHHHHcCCcEEEE
Confidence 432 2357776
No 211
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=38.15 E-value=30 Score=35.55 Aligned_cols=84 Identities=11% Similarity=0.107 Sum_probs=47.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeeccc-----cCCCCh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAAV-----EKVITK 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaAl-----~~~It~ 426 (568)
|++|+.+|+.|...|.+|++.. . +... . .+.... +.++++ ..|||++-|.- .+.|++
T Consensus 180 G~IG~~vA~~l~~~G~~V~~~d-r--~~~~------~-------~~~~~~~sl~ell-~~aDvVil~vP~t~~t~~li~~ 242 (340)
T 4dgs_A 180 GQIGRALASRAEAFGMSVRYWN-R--STLS------G-------VDWIAHQSPVDLA-RDSDVLAVCVAASAATQNIVDA 242 (340)
T ss_dssp SHHHHHHHHHHHTTTCEEEEEC-S--SCCT------T-------SCCEECSSHHHHH-HTCSEEEECC----------CH
T ss_pred CHHHHHHHHHHHHCCCEEEEEc-C--Cccc------c-------cCceecCCHHHHH-hcCCEEEEeCCCCHHHHHHhhH
Confidence 9999999999999999998743 2 1100 0 122222 223333 47999998753 567888
Q ss_pred hhHhccc-ceEEEecCCcchH--HHHHHHh
Q psy8846 427 NNAHKIQ-AKIIAEAANESVQ--ESLERRF 453 (568)
Q Consensus 427 ~na~~i~-AkiIvE~AN~~~~--~~l~~~l 453 (568)
+....++ -.+++..|.+++. +.|.+.|
T Consensus 243 ~~l~~mk~gailIN~aRG~vvde~aL~~aL 272 (340)
T 4dgs_A 243 SLLQALGPEGIVVNVARGNVVDEDALIEAL 272 (340)
T ss_dssp HHHHHTTTTCEEEECSCC------------
T ss_pred HHHhcCCCCCEEEECCCCcccCHHHHHHHH
Confidence 8887776 4688888887752 2354444
No 212
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=38.13 E-value=60 Score=32.12 Aligned_cols=83 Identities=14% Similarity=-0.007 Sum_probs=51.7
Q ss_pred cCHHHHHHHHHHHCCC-eEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccC------CCC
Q psy8846 353 GPVSMYLPQIWVQEKG-KCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEK------VIT 425 (568)
Q Consensus 353 GnVG~~~A~~L~~~Ga-kvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~------~It 425 (568)
|.+|..++..|.+.|+ +|+. . +-+.++..+..++.+. .....++-+++-..++||+|=|---+ .|.
T Consensus 129 Gg~~~aia~~L~~~G~~~v~i-~--~R~~~~a~~la~~~~~----~~~~~~~~~~l~~~~~DivInaTp~gm~~~~~~i~ 201 (272)
T 3pwz_A 129 GGAVRGALLPFLQAGPSELVI-A--NRDMAKALALRNELDH----SRLRISRYEALEGQSFDIVVNATSASLTADLPPLP 201 (272)
T ss_dssp SHHHHHHHHHHHHTCCSEEEE-E--CSCHHHHHHHHHHHCC----TTEEEECSGGGTTCCCSEEEECSSGGGGTCCCCCC
T ss_pred cHHHHHHHHHHHHcCCCEEEE-E--eCCHHHHHHHHHHhcc----CCeeEeeHHHhcccCCCEEEECCCCCCCCCCCCCC
Confidence 8899999999999997 5544 3 3467777766665432 12233333333336899999654322 133
Q ss_pred hhhHhcc-cceEEEecCCcch
Q psy8846 426 KNNAHKI-QAKIIAEAANESV 445 (568)
Q Consensus 426 ~~na~~i-~AkiIvE~AN~~~ 445 (568)
.+ .+ +..+|++-..+|.
T Consensus 202 ~~---~l~~~~~V~DlvY~P~ 219 (272)
T 3pwz_A 202 AD---VLGEAALAYELAYGKG 219 (272)
T ss_dssp GG---GGTTCSEEEESSCSCC
T ss_pred HH---HhCcCCEEEEeecCCC
Confidence 22 23 3578899988774
No 213
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=37.94 E-value=12 Score=36.60 Aligned_cols=22 Identities=0% Similarity=-0.000 Sum_probs=20.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.+.
T Consensus 41 ~GIG~aia~~la~~G~~V~~~~ 62 (273)
T 3uf0_A 41 SGIGRAIAHGYARAGAHVLAWG 62 (273)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred cHHHHHHHHHHHHCCCEEEEEc
Confidence 7899999999999999998866
No 214
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=37.52 E-value=20 Score=35.19 Aligned_cols=33 Identities=6% Similarity=-0.169 Sum_probs=25.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYK 387 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~ 387 (568)
|-+|.++|+.|++.|++|+.+.. .+.+.+.+..
T Consensus 19 ~GIG~aia~~la~~G~~V~~~~~--r~~~~~~~~~ 51 (291)
T 1e7w_A 19 KRLGRSIAEGLHAEGYAVCLHYH--RSAAEANALS 51 (291)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEES--SCHHHHHHHH
T ss_pred chHHHHHHHHHHHCCCeEEEEcC--CCHHHHHHHH
Confidence 67999999999999999988431 4566555443
No 215
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=37.43 E-value=10 Score=38.66 Aligned_cols=85 Identities=15% Similarity=0.108 Sum_probs=51.8
Q ss_pred cCHHHHHHHHHHHC-CCeEeEeCCCCCCHHHHHHHHHhcC-Cccc-CCCCe--------ec--CCCCcccccceEEeecc
Q psy8846 353 GPVSMYLPQIWVQE-KGKCPGLPTHTRKPLALEEYKLDNG-TIVG-FPGAV--------PY--EGENLMYEPCDIFVPAA 419 (568)
Q Consensus 353 GnVG~~~A~~L~~~-GakvvaVsD~GiD~~~L~~~~~~~g-~v~~-~~ga~--------~i--~~~~ll~~~cDIliPaA 419 (568)
|.+|...++.|.+. +.++++|+|.. .+.+....+..| ++.+ |++.. .+ +.++++. ++|+++=|
T Consensus 11 G~iG~~~~r~l~~~~~~elvav~d~~--~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~-~vDvV~~a- 86 (334)
T 2czc_A 11 GTIGKRVAYAVTKQDDMELIGITKTK--PDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLE-KVDIIVDA- 86 (334)
T ss_dssp SHHHHHHHHHHHTCTTEEEEEEEESS--CSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHT-TCSEEEEC-
T ss_pred hHHHHHHHHHHhcCCCCEEEEEEcCC--HHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhcc-CCCEEEEC-
Confidence 89999999999875 78999999874 334444444443 2211 11110 11 1234444 89999987
Q ss_pred ccCCCChhhHhcc---cceEEEecC
Q psy8846 420 VEKVITKNNAHKI---QAKIIAEAA 441 (568)
Q Consensus 420 l~~~It~~na~~i---~AkiIvE~A 441 (568)
.++-.+.+.+... .+++|+|+-
T Consensus 87 Tp~~~h~~~a~~~l~aGk~Vi~sap 111 (334)
T 2czc_A 87 TPGGIGAKNKPLYEKAGVKAIFQGG 111 (334)
T ss_dssp CSTTHHHHHHHHHHHHTCEEEECTT
T ss_pred CCccccHHHHHHHHHcCCceEeecc
Confidence 4555556665533 367888764
No 216
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=37.29 E-value=8.6 Score=37.21 Aligned_cols=31 Identities=16% Similarity=-0.006 Sum_probs=24.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEY 386 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~ 386 (568)
|-+|.++|+.|.+.|++|++++ .+.+.+.+.
T Consensus 41 ggIG~~la~~L~~~G~~V~~~~---r~~~~~~~~ 71 (272)
T 1yb1_A 41 HGIGRLTAYEFAKLKSKLVLWD---INKHGLEET 71 (272)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHH
T ss_pred chHHHHHHHHHHHCCCEEEEEE---cCHHHHHHH
Confidence 7899999999999999998853 455555443
No 217
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=37.27 E-value=21 Score=34.45 Aligned_cols=35 Identities=3% Similarity=-0.270 Sum_probs=28.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDN 390 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~ 390 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..++.
T Consensus 40 ~GIG~aia~~l~~~G~~Vi~~---~r~~~~~~~~~~~~ 74 (281)
T 3ppi_A 40 GGLGEATVRRLHADGLGVVIA---DLAAEKGKALADEL 74 (281)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHCCCEEEEE---eCChHHHHHHHHHh
Confidence 789999999999999999884 46777777766553
No 218
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=37.22 E-value=18 Score=34.53 Aligned_cols=23 Identities=0% Similarity=-0.201 Sum_probs=19.9
Q ss_pred CHHHHHHHHHHHCCCeEeEeCCC
Q psy8846 354 PVSMYLPQIWVQEKGKCPGLPTH 376 (568)
Q Consensus 354 nVG~~~A~~L~~~GakvvaVsD~ 376 (568)
-+|.++|+.|++.|++|+.+...
T Consensus 33 giG~~~a~~l~~~G~~v~~~~~~ 55 (267)
T 3gdg_A 33 GMGIEAARGCAEMGAAVAITYAS 55 (267)
T ss_dssp SHHHHHHHHHHHTSCEEEECBSS
T ss_pred ChHHHHHHHHHHCCCeEEEEeCC
Confidence 69999999999999999886533
No 219
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=37.13 E-value=46 Score=33.10 Aligned_cols=75 Identities=9% Similarity=0.022 Sum_probs=44.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCC-ccc--CCCC----eecC-CCCcccccceEEeeccccCCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGT-IVG--FPGA----VPYE-GENLMYEPCDIFVPAAVEKVI 424 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~-v~~--~~ga----~~i~-~~~ll~~~cDIliPaAl~~~I 424 (568)
|++|..+|..|.+.|..|+.+ +.+.+.+.+..+..+. +.+ ++.. ...+ .++.+ .+||+++-|.-....
T Consensus 13 G~~G~~~a~~L~~~g~~V~~~---~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~D~vi~~v~~~~~ 88 (359)
T 1bg6_A 13 GNGGHAFAAYLALKGQSVLAW---DIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV-KDADVILIVVPAIHH 88 (359)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---CSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH-TTCSEEEECSCGGGH
T ss_pred CHHHHHHHHHHHhCCCEEEEE---eCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHH-hcCCEEEEeCCchHH
Confidence 999999999999999997763 3566777666555331 111 1100 1111 11222 379999988765543
Q ss_pred ChhhHhcc
Q psy8846 425 TKNNAHKI 432 (568)
Q Consensus 425 t~~na~~i 432 (568)
.+-+..+
T Consensus 89 -~~~~~~l 95 (359)
T 1bg6_A 89 -ASIAANI 95 (359)
T ss_dssp -HHHHHHH
T ss_pred -HHHHHHH
Confidence 4444443
No 220
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=37.12 E-value=11 Score=36.78 Aligned_cols=22 Identities=0% Similarity=0.001 Sum_probs=19.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.++
T Consensus 42 ~GIG~aia~~la~~G~~V~~~~ 63 (276)
T 3r1i_A 42 TGIGKKVALAYAEAGAQVAVAA 63 (276)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEe
Confidence 7899999999999999988854
No 221
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=37.10 E-value=12 Score=35.77 Aligned_cols=21 Identities=0% Similarity=-0.094 Sum_probs=19.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEe
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGL 373 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaV 373 (568)
|-+|.++|+.|++.|++|+.+
T Consensus 14 ~gIG~~ia~~l~~~G~~V~~~ 34 (260)
T 1x1t_A 14 SGIGLGIATALAAQGADIVLN 34 (260)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHHHcCCEEEEE
Confidence 679999999999999998875
No 222
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=36.83 E-value=12 Score=36.38 Aligned_cols=31 Identities=10% Similarity=-0.077 Sum_probs=24.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEY 386 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~ 386 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+.
T Consensus 31 ~gIG~~ia~~l~~~G~~V~~~---~r~~~~~~~~ 61 (267)
T 1vl8_A 31 RGLGFGIAQGLAEAGCSVVVA---SRNLEEASEA 61 (267)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHH
Confidence 789999999999999999884 3466665544
No 223
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=36.75 E-value=5.8 Score=38.68 Aligned_cols=30 Identities=13% Similarity=0.098 Sum_probs=24.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEE 385 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~ 385 (568)
|-+|.++|+.|++.|++|+.++ .+.+.+.+
T Consensus 26 ~gIG~aia~~l~~~G~~V~~~~---r~~~~~~~ 55 (266)
T 3p19_A 26 SGIGEAIARRFSEEGHPLLLLA---RRVERLKA 55 (266)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEE---SCHHHHHT
T ss_pred CHHHHHHHHHHHHCCCEEEEEE---CCHHHHHH
Confidence 7899999999999999999853 45555543
No 224
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=36.54 E-value=12 Score=35.87 Aligned_cols=33 Identities=9% Similarity=-0.077 Sum_probs=25.2
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|.+|+++|+.|.+.|++|+.+ +.+.+.+.+..+
T Consensus 26 ggiG~~~a~~l~~~G~~V~~~---~r~~~~~~~~~~ 58 (278)
T 2bgk_A 26 GGIGETTAKLFVRYGAKVVIA---DIADDHGQKVCN 58 (278)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEE---cCChhHHHHHHH
Confidence 899999999999999999885 345555544433
No 225
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=36.49 E-value=6.7 Score=41.58 Aligned_cols=90 Identities=14% Similarity=0.132 Sum_probs=56.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCC-CC---CH-HHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCCCChh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTH-TR---KP-LALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~-Gi---D~-~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~It~~ 427 (568)
|.+|..+|+.|...|++=|.+.|+ |+ +- +.|..++.....-.+ +....-+-++.+. .+||||=+.-.+.+|++
T Consensus 197 GaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~-~~~~~~~L~eav~-~ADV~IG~Sapgl~T~E 274 (398)
T 2a9f_A 197 GSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTN-REFKSGTLEDALE-GADIFIGVSAPGVLKAE 274 (398)
T ss_dssp SHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHS-CTTCCCSCSHHHH-TTCSEEECCSTTCCCHH
T ss_pred CHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccC-cccchhhHHHHhc-cCCEEEecCCCCCCCHH
Confidence 999999999999999966667777 52 11 112222221110000 0001111123332 47999999999999999
Q ss_pred hHhccc-ceEEEecCCcc
Q psy8846 428 NAHKIQ-AKIIAEAANES 444 (568)
Q Consensus 428 na~~i~-AkiIvE~AN~~ 444 (568)
-+...+ =.||.--||+-
T Consensus 275 mVk~Ma~~pIIfalsNPt 292 (398)
T 2a9f_A 275 WISKMAARPVIFAMANPI 292 (398)
T ss_dssp HHHTSCSSCEEEECCSSS
T ss_pred HHHhhCCCCEEEECCCCC
Confidence 999885 57888999954
No 226
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=36.49 E-value=38 Score=33.24 Aligned_cols=33 Identities=6% Similarity=-0.097 Sum_probs=27.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
+-.|..+|+.|++.||+|+. .+.+.+.+.+..+
T Consensus 19 ~GIG~aia~~la~~Ga~Vvi---~~~~~~~~~~~~~ 51 (255)
T 4g81_D 19 RGLGFAYAEGLAAAGARVIL---NDIRATLLAESVD 51 (255)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---CCSCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEE---EECCHHHHHHHHH
Confidence 56899999999999999887 5678887776544
No 227
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=36.47 E-value=35 Score=34.11 Aligned_cols=90 Identities=13% Similarity=0.169 Sum_probs=50.0
Q ss_pred cCHHHHHHHHHHHCC----CeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC-CCCcccccceEEeeccccCCCChh
Q psy8846 353 GPVSMYLPQIWVQEK----GKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE-GENLMYEPCDIFVPAAVEKVITKN 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~G----akvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~-~~~ll~~~cDIliPaAl~~~It~~ 427 (568)
|++|..+|..|.+.| ..|+. .|..-+.+.+.+.. +. |....+ +.+. -.+|||++-|--.. ...+
T Consensus 31 G~mG~ala~~L~~~G~~~~~~V~v-~~r~~~~~~~~~l~-~~-------G~~~~~~~~e~-~~~aDvVilav~~~-~~~~ 99 (322)
T 2izz_A 31 GQLAFALAKGFTAAGVLAAHKIMA-SSPDMDLATVSALR-KM-------GVKLTPHNKET-VQHSDVLFLAVKPH-IIPF 99 (322)
T ss_dssp SHHHHHHHHHHHHTTSSCGGGEEE-ECSCTTSHHHHHHH-HH-------TCEEESCHHHH-HHHCSEEEECSCGG-GHHH
T ss_pred CHHHHHHHHHHHHCCCCCcceEEE-ECCCccHHHHHHHH-Hc-------CCEEeCChHHH-hccCCEEEEEeCHH-HHHH
Confidence 999999999999999 56654 44432212344433 22 233222 1222 24799999886543 2333
Q ss_pred hHh----ccc-ceEEEecCCcchHHHHHHHh
Q psy8846 428 NAH----KIQ-AKIIAEAANESVQESLERRF 453 (568)
Q Consensus 428 na~----~i~-AkiIvE~AN~~~~~~l~~~l 453 (568)
-+. .++ -++|+.-+|+--.+.+++.+
T Consensus 100 vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l 130 (322)
T 2izz_A 100 ILDEIGADIEDRHIVVSCAAGVTISSIEKKL 130 (322)
T ss_dssp HHHHHGGGCCTTCEEEECCTTCCHHHHHHHH
T ss_pred HHHHHHhhcCCCCEEEEeCCCCCHHHHHHHH
Confidence 333 333 46888888854223334333
No 228
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=36.37 E-value=11 Score=37.15 Aligned_cols=20 Identities=0% Similarity=-0.182 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHCCCeEeEeC
Q psy8846 355 VSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 355 VG~~~A~~L~~~GakvvaVs 374 (568)
+|+++|+.|++.|++|+.+.
T Consensus 45 IG~aia~~la~~G~~V~~~~ 64 (293)
T 3grk_A 45 IAWGIAKAAREAGAELAFTY 64 (293)
T ss_dssp HHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEc
Confidence 99999999999999988753
No 229
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=36.20 E-value=24 Score=32.88 Aligned_cols=34 Identities=12% Similarity=-0.032 Sum_probs=27.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..++
T Consensus 11 ~gIG~~~a~~l~~~G~~V~~~---~r~~~~~~~~~~~ 44 (230)
T 3guy_A 11 SGLGAELAKLYDAEGKATYLT---GRSESKLSTVTNC 44 (230)
T ss_dssp SHHHHHHHHHHHHTTCCEEEE---ESCHHHHHHHHHT
T ss_pred chHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHH
Confidence 679999999999999998884 4577777776654
No 230
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=36.15 E-value=8.8 Score=37.41 Aligned_cols=31 Identities=6% Similarity=-0.022 Sum_probs=24.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEY 386 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~ 386 (568)
|-+|.++|+.|++.|++|+.++ .+.+.+.+.
T Consensus 38 ~GIG~aia~~la~~G~~V~~~~---r~~~~~~~~ 68 (270)
T 3ftp_A 38 RGIGRAIALELARRGAMVIGTA---TTEAGAEGI 68 (270)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE---SSHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEEe---CCHHHHHHH
Confidence 7899999999999999998853 455555443
No 231
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=36.06 E-value=16 Score=34.58 Aligned_cols=22 Identities=9% Similarity=-0.072 Sum_probs=20.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|+++|+.|++.|++|+.+.
T Consensus 23 ~giG~~ia~~l~~~G~~v~~~~ 44 (256)
T 3ezl_A 23 GGIGTSICQRLHKDGFRVVAGC 44 (256)
T ss_dssp SHHHHHHHHHHHHTTEEEEEEE
T ss_pred ChHHHHHHHHHHHCCCEEEEEe
Confidence 7899999999999999998865
No 232
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=36.05 E-value=9.2 Score=36.47 Aligned_cols=31 Identities=10% Similarity=-0.154 Sum_probs=24.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEE 385 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~ 385 (568)
|.+|+++|+.|.+.|++|+++... +.+.+.+
T Consensus 31 ggiG~~la~~l~~~G~~v~~~~r~--~~~~~~~ 61 (274)
T 1ja9_A 31 RGIGRGIAIELGRRGASVVVNYGS--SSKAAEE 61 (274)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESS--CHHHHHH
T ss_pred chHHHHHHHHHHHCCCEEEEEcCC--chHHHHH
Confidence 789999999999999999986531 4444443
No 233
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=35.94 E-value=9.3 Score=36.31 Aligned_cols=31 Identities=13% Similarity=-0.038 Sum_probs=23.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEE 385 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~ 385 (568)
|.+|+++|+.|.+.|++|+.++-. +.+.+.+
T Consensus 17 ggiG~~~a~~l~~~G~~V~~~~r~--~~~~~~~ 47 (261)
T 1gee_A 17 TGLGKSMAIRFATEKAKVVVNYRS--KEDEANS 47 (261)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESS--CHHHHHH
T ss_pred ChHHHHHHHHHHHCCCEEEEEcCC--ChHHHHH
Confidence 789999999999999999885421 4444443
No 234
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=35.87 E-value=12 Score=36.43 Aligned_cols=31 Identities=10% Similarity=-0.018 Sum_probs=24.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEY 386 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~ 386 (568)
|-+|.++|+.|++.|++|+++ +.+.+.+.+.
T Consensus 32 ~gIG~~ia~~l~~~G~~V~~~---~r~~~~~~~~ 62 (277)
T 2rhc_B 32 SGIGLEIARRLGKEGLRVFVC---ARGEEGLRTT 62 (277)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHH
Confidence 789999999999999999884 3466655543
No 235
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=35.45 E-value=15 Score=39.00 Aligned_cols=88 Identities=7% Similarity=-0.012 Sum_probs=45.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCC---CcccccceEEeeccccCCCChhhH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGE---NLMYEPCDIFVPAAVEKVITKNNA 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~---~ll~~~cDIliPaAl~~~It~~na 429 (568)
|.+|+++++.|.+.|++|+. . +.+.+++.+..++.+.+..+. ....+.+ +++ .++|+++=||-.. .+.+.+
T Consensus 12 G~iG~~ia~~L~~~G~~V~v-~--~R~~~~a~~la~~~~~~~~~~-~Dv~d~~~l~~~l-~~~DvVIn~a~~~-~~~~i~ 85 (450)
T 1ff9_A 12 GFVTRPTLDVLTDSGIKVTV-A--CRTLESAKKLSAGVQHSTPIS-LDVNDDAALDAEV-AKHDLVISLIPYT-FHATVI 85 (450)
T ss_dssp STTHHHHHHHHHTTTCEEEE-E--ESSHHHHHHTTTTCTTEEEEE-CCTTCHHHHHHHH-TTSSEEEECCC---CHHHHH
T ss_pred CHHHHHHHHHHHhCcCEEEE-E--ECCHHHHHHHHHhcCCceEEE-eecCCHHHHHHHH-cCCcEEEECCccc-cchHHH
Confidence 89999999999999999655 3 346666655443322111000 0000011 223 2799999998432 222222
Q ss_pred -hccc--ceEEEecCCcchH
Q psy8846 430 -HKIQ--AKIIAEAANESVQ 446 (568)
Q Consensus 430 -~~i~--AkiIvE~AN~~~~ 446 (568)
..++ .-++.++...+..
T Consensus 86 ~a~l~~g~~vvd~~~~~~~~ 105 (450)
T 1ff9_A 86 KSAIRQKKHVVTTSYVSPAM 105 (450)
T ss_dssp HHHHHHTCEEEESSCCCHHH
T ss_pred HHHHhCCCeEEEeecccHHH
Confidence 2233 3456665444443
No 236
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=35.34 E-value=34 Score=35.32 Aligned_cols=23 Identities=4% Similarity=-0.155 Sum_probs=19.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTH 376 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~ 376 (568)
|.+|..+++.+...|++|++ .|.
T Consensus 181 G~iG~~aa~~a~~~Ga~V~~-~d~ 203 (384)
T 1l7d_A 181 GVAGLQAIATAKRLGAVVMA-TDV 203 (384)
T ss_dssp SHHHHHHHHHHHHTTCEEEE-ECS
T ss_pred CHHHHHHHHHHHHCCCEEEE-EeC
Confidence 99999999999999999555 443
No 237
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=35.21 E-value=13 Score=35.87 Aligned_cols=34 Identities=12% Similarity=0.101 Sum_probs=27.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..++
T Consensus 16 ~gIG~aia~~l~~~G~~V~~~---~r~~~~~~~~~~~ 49 (263)
T 2a4k_A 16 SGIGRAALDLFAREGASLVAV---DREERLLAEAVAA 49 (263)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHH
Confidence 789999999999999999884 4567777666554
No 238
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=34.95 E-value=31 Score=34.20 Aligned_cols=76 Identities=8% Similarity=0.007 Sum_probs=46.7
Q ss_pred cCHHHH-HHHHHHH-CCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCC-CCcccccceEEeeccccCCCChhhH
Q psy8846 353 GPVSMY-LPQIWVQ-EKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEG-ENLMYEPCDIFVPAAVEKVITKNNA 429 (568)
Q Consensus 353 GnVG~~-~A~~L~~-~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~-~~ll~~~cDIliPaAl~~~It~~na 429 (568)
|++|.. .++.|.+ .|+++++|+|.. .++..+..++.|- ...+. +++ ..++|+++-| +.+..+.+.+
T Consensus 14 G~~g~~~~~~~l~~~~~~~lvav~d~~--~~~~~~~~~~~g~-------~~~~~~~~l-~~~~D~V~i~-tp~~~h~~~~ 82 (319)
T 1tlt_A 14 GGIAQKAWLPVLAAASDWTLQGAWSPT--RAKALPICESWRI-------PYADSLSSL-AASCDAVFVH-SSTASHFDVV 82 (319)
T ss_dssp STHHHHTHHHHHHSCSSEEEEEEECSS--CTTHHHHHHHHTC-------CBCSSHHHH-HTTCSEEEEC-SCTTHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCeEEEEEECCC--HHHHHHHHHHcCC-------CccCcHHHh-hcCCCEEEEe-CCchhHHHHH
Confidence 999985 7887776 589999999874 3344444444431 12222 234 6689999866 4555555555
Q ss_pred hc-cc--ceEEEe
Q psy8846 430 HK-IQ--AKIIAE 439 (568)
Q Consensus 430 ~~-i~--AkiIvE 439 (568)
.. ++ ..+++|
T Consensus 83 ~~al~~G~~v~~e 95 (319)
T 1tlt_A 83 STLLNAGVHVCVD 95 (319)
T ss_dssp HHHHHTTCEEEEE
T ss_pred HHHHHcCCeEEEe
Confidence 43 23 347888
No 239
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=34.84 E-value=25 Score=35.01 Aligned_cols=77 Identities=12% Similarity=0.056 Sum_probs=50.9
Q ss_pred cCHHHHHHHHHHHC-CCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccc-cceEEeeccccCCCChhhHh
Q psy8846 353 GPVSMYLPQIWVQE-KGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYE-PCDIFVPAAVEKVITKNNAH 430 (568)
Q Consensus 353 GnVG~~~A~~L~~~-GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~-~cDIliPaAl~~~It~~na~ 430 (568)
|++|...++.|.+. |+++++|+|. |.+.+.+..++.| ...-+.++++.. ++|+++-|. .+..+.+.+.
T Consensus 12 G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~~~~-------~~~~~~~~~l~~~~~D~V~i~t-p~~~h~~~~~ 81 (331)
T 4hkt_A 12 GRIGKVHAKAVSGNADARLVAVADA--FPAAAEAIAGAYG-------CEVRTIDAIEAAADIDAVVICT-PTDTHADLIE 81 (331)
T ss_dssp SHHHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHHHTT-------CEECCHHHHHHCTTCCEEEECS-CGGGHHHHHH
T ss_pred CHHHHHHHHHHhhCCCcEEEEEECC--CHHHHHHHHHHhC-------CCcCCHHHHhcCCCCCEEEEeC-CchhHHHHHH
Confidence 89999999999885 8999999876 7777777766653 221123456653 789888764 4444554444
Q ss_pred cc---cceEEEe
Q psy8846 431 KI---QAKIIAE 439 (568)
Q Consensus 431 ~i---~AkiIvE 439 (568)
.. ...+++|
T Consensus 82 ~al~~gk~v~~E 93 (331)
T 4hkt_A 82 RFARAGKAIFCE 93 (331)
T ss_dssp HHHHTTCEEEEC
T ss_pred HHHHcCCcEEEe
Confidence 32 2357776
No 240
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=34.80 E-value=23 Score=35.44 Aligned_cols=79 Identities=10% Similarity=0.089 Sum_probs=46.8
Q ss_pred cCHHHHHHHHHHHCCC-eEeEeCCCCCC--HHHHHHHHHhcCCcccCCCCeecCC-CCcccccceEEeeccccCCCChhh
Q psy8846 353 GPVSMYLPQIWVQEKG-KCPGLPTHTRK--PLALEEYKLDNGTIVGFPGAVPYEG-ENLMYEPCDIFVPAAVEKVITKNN 428 (568)
Q Consensus 353 GnVG~~~A~~L~~~Ga-kvvaVsD~GiD--~~~L~~~~~~~g~v~~~~ga~~i~~-~~ll~~~cDIliPaAl~~~It~~n 428 (568)
|++|..+|+.|.+.|. .|++ .+.+ .+.+.... +. |.+..+. ++++ .+|||++-|--..... +.
T Consensus 33 G~mG~~~A~~L~~~G~~~V~~---~dr~~~~~~~~~~~-~~-------g~~~~~~~~e~~-~~aDvVi~~vp~~~~~-~~ 99 (312)
T 3qsg_A 33 GEAASAIASGLRQAGAIDMAA---YDAASAESWRPRAE-EL-------GVSCKASVAEVA-GECDVIFSLVTAQAAL-EV 99 (312)
T ss_dssp SHHHHHHHHHHHHHSCCEEEE---ECSSCHHHHHHHHH-HT-------TCEECSCHHHHH-HHCSEEEECSCTTTHH-HH
T ss_pred cHHHHHHHHHHHHCCCCeEEE---EcCCCCHHHHHHHH-HC-------CCEEeCCHHHHH-hcCCEEEEecCchhHH-HH
Confidence 9999999999999999 7665 3344 34444333 32 3333322 2322 4799999886544332 23
Q ss_pred Hhcc-----cceEEEecCCcc
Q psy8846 429 AHKI-----QAKIIAEAANES 444 (568)
Q Consensus 429 a~~i-----~AkiIvE~AN~~ 444 (568)
+..+ .-++|+...+..
T Consensus 100 ~~~l~~~l~~~~ivvd~st~~ 120 (312)
T 3qsg_A 100 AQQAGPHLCEGALYADFTSCS 120 (312)
T ss_dssp HHHHGGGCCTTCEEEECCCCC
T ss_pred HHhhHhhcCCCCEEEEcCCCC
Confidence 3333 235777766644
No 241
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=34.74 E-value=1.1e+02 Score=31.69 Aligned_cols=87 Identities=15% Similarity=0.190 Sum_probs=51.8
Q ss_pred cCHHHHHHHHHHHC-CCeEeEeCCCCCCHHHHH---HHHHhcCCcccC----------CCCe--ec---CCCCc-c-ccc
Q psy8846 353 GPVSMYLPQIWVQE-KGKCPGLPTHTRKPLALE---EYKLDNGTIVGF----------PGAV--PY---EGENL-M-YEP 411 (568)
Q Consensus 353 GnVG~~~A~~L~~~-GakvvaVsD~GiD~~~L~---~~~~~~g~v~~~----------~ga~--~i---~~~~l-l-~~~ 411 (568)
|.+|..+.|.|.+. ..+||+|.|.-.|.+.+. ++-..+|...+. .|.. .. +++++ | +.+
T Consensus 26 G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~i~w~~~~ 105 (354)
T 3cps_A 26 GRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKDPAEIPWGASG 105 (354)
T ss_dssp SHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSCGGGCCHHHHT
T ss_pred CHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCChHHCCcccCC
Confidence 99999999999886 799999998324666433 332333332111 0111 11 12222 2 367
Q ss_pred ceEEeeccccCCCChhhHhcc-c--ce-EEEec
Q psy8846 412 CDIFVPAAVEKVITKNNAHKI-Q--AK-IIAEA 440 (568)
Q Consensus 412 cDIliPaAl~~~It~~na~~i-~--Ak-iIvE~ 440 (568)
|||++-| ++.-.+.+.++.. + || +|+.+
T Consensus 106 vDvV~ea-tg~~~s~e~a~~~l~~GakkvVId~ 137 (354)
T 3cps_A 106 AQIVCES-TGVFTTEEKASLHLKGGAKKVIISA 137 (354)
T ss_dssp CCEEEEC-SSSCCSHHHHGGGGTTTCSEEEESS
T ss_pred CCEEEEC-CCchhhHHHHHHHHHcCCcEEEEeC
Confidence 9998877 5666777777755 2 42 56654
No 242
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=34.71 E-value=23 Score=35.96 Aligned_cols=77 Identities=10% Similarity=0.105 Sum_probs=51.0
Q ss_pred cCHHH-HHHHHHHHC-CCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCccc-ccceEEeeccccCCCChhh
Q psy8846 353 GPVSM-YLPQIWVQE-KGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMY-EPCDIFVPAAVEKVITKNN 428 (568)
Q Consensus 353 GnVG~-~~A~~L~~~-GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~-~~cDIliPaAl~~~It~~n 428 (568)
|++|. +.++.|.+. |+++++|+|. |.++..+..++.| ...+ +.++++. .++|+++-| +.+..+.+.
T Consensus 36 G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~~~g-------~~~~~~~~~ll~~~~~D~V~i~-tp~~~h~~~ 105 (350)
T 3rc1_A 36 ADIAWRRALPALEAEPLTEVTAIASR--RWDRAKRFTERFG-------GEPVEGYPALLERDDVDAVYVP-LPAVLHAEW 105 (350)
T ss_dssp CHHHHHTHHHHHHHCTTEEEEEEEES--SHHHHHHHHHHHC-------SEEEESHHHHHTCTTCSEEEEC-CCGGGHHHH
T ss_pred cHHHHHHHHHHHHhCCCeEEEEEEcC--CHHHHHHHHHHcC-------CCCcCCHHHHhcCCCCCEEEEC-CCcHHHHHH
Confidence 99998 678888876 8999999876 7777777766653 2222 2345664 468888876 455555555
Q ss_pred Hhcc---cceEEEe
Q psy8846 429 AHKI---QAKIIAE 439 (568)
Q Consensus 429 a~~i---~AkiIvE 439 (568)
+... ...++||
T Consensus 106 ~~~al~aGk~Vl~E 119 (350)
T 3rc1_A 106 IDRALRAGKHVLAE 119 (350)
T ss_dssp HHHHHHTTCEEEEE
T ss_pred HHHHHHCCCcEEEe
Confidence 5432 2357777
No 243
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=34.53 E-value=30 Score=35.56 Aligned_cols=85 Identities=12% Similarity=-0.005 Sum_probs=49.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCee-----cCCCCcc--cccceEEeeccccCCCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVP-----YEGENLM--YEPCDIFVPAAVEKVIT 425 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~-----i~~~~ll--~~~cDIliPaAl~~~It 425 (568)
|++|..+|..|++.|..|.. .+.|.+.+.+..+.......+|+.+. .+ .++- -.+||+++-|--.. ..
T Consensus 38 G~mG~alA~~La~~G~~V~l---~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t-~d~~ea~~~aDvVilaVp~~-~~ 112 (356)
T 3k96_A 38 GSWGTALALVLARKGQKVRL---WSYESDHVDEMQAEGVNNRYLPNYPFPETLKAY-CDLKASLEGVTDILIVVPSF-AF 112 (356)
T ss_dssp SHHHHHHHHHHHTTTCCEEE---ECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEE-SCHHHHHTTCCEEEECCCHH-HH
T ss_pred cHHHHHHHHHHHHCCCeEEE---EeCCHHHHHHHHHcCCCcccCCCCccCCCeEEE-CCHHHHHhcCCEEEECCCHH-HH
Confidence 99999999999999998876 45677777666554322222233221 11 1221 24789988774332 22
Q ss_pred hhhHhc----cc-ceEEEecCC
Q psy8846 426 KNNAHK----IQ-AKIIAEAAN 442 (568)
Q Consensus 426 ~~na~~----i~-AkiIvE~AN 442 (568)
.+.+.. ++ -.+|+..+|
T Consensus 113 ~~vl~~i~~~l~~~~ivvs~~k 134 (356)
T 3k96_A 113 HEVITRMKPLIDAKTRIAWGTK 134 (356)
T ss_dssp HHHHHHHGGGCCTTCEEEECCC
T ss_pred HHHHHHHHHhcCCCCEEEEEeC
Confidence 233333 32 346666666
No 244
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=34.49 E-value=10 Score=36.62 Aligned_cols=23 Identities=4% Similarity=-0.273 Sum_probs=20.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPT 375 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD 375 (568)
|-+|.++|+.|++.|++|+.++.
T Consensus 39 ~gIG~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 39 KGIGAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEES
T ss_pred cHHHHHHHHHHHHCCCEEEEEeC
Confidence 78999999999999999998654
No 245
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=34.28 E-value=20 Score=35.76 Aligned_cols=21 Identities=10% Similarity=0.030 Sum_probs=19.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEe
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGL 373 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaV 373 (568)
|-+|.++|+.|++.|++|+.+
T Consensus 37 ~GIG~aia~~la~~G~~Vv~~ 57 (322)
T 3qlj_A 37 GGIGRAHALAFAAEGARVVVN 57 (322)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHHHCCCEEEEE
Confidence 689999999999999999885
No 246
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=34.20 E-value=54 Score=33.04 Aligned_cols=81 Identities=11% Similarity=0.058 Sum_probs=53.3
Q ss_pred cCHHHHHHHHHHHC-CCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC-CCCccc-ccceEEeeccccCCCChhhH
Q psy8846 353 GPVSMYLPQIWVQE-KGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE-GENLMY-EPCDIFVPAAVEKVITKNNA 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~-GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~-~~~ll~-~~cDIliPaAl~~~It~~na 429 (568)
|++|...++.|.+. ++++++|+|. |.++..+..++.|- -+....++ .++++. .++|+++-|. .+..+.+.+
T Consensus 15 G~ig~~~~~~l~~~~~~~lv~v~d~--~~~~~~~~a~~~~~---~~~~~~~~~~~~ll~~~~~D~V~i~t-p~~~h~~~~ 88 (362)
T 1ydw_A 15 ADIARKVSRAIHLAPNATISGVASR--SLEKAKAFATANNY---PESTKIHGSYESLLEDPEIDALYVPL-PTSLHVEWA 88 (362)
T ss_dssp CTTHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHHHTTC---CTTCEEESSHHHHHHCTTCCEEEECC-CGGGHHHHH
T ss_pred hHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHHHHhCC---CCCCeeeCCHHHHhcCCCCCEEEEcC-ChHHHHHHH
Confidence 99999888888874 7899999875 67777776666541 01223332 345665 3799998774 555566655
Q ss_pred hcc-c--ceEEEe
Q psy8846 430 HKI-Q--AKIIAE 439 (568)
Q Consensus 430 ~~i-~--AkiIvE 439 (568)
... + ..+++|
T Consensus 89 ~~al~aGk~V~~E 101 (362)
T 1ydw_A 89 IKAAEKGKHILLE 101 (362)
T ss_dssp HHHHTTTCEEEEC
T ss_pred HHHHHCCCeEEEe
Confidence 533 3 357887
No 247
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=33.82 E-value=25 Score=35.01 Aligned_cols=78 Identities=12% Similarity=0.097 Sum_probs=50.7
Q ss_pred cCHHHHHHHHHHHC-CCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC-CCCcccccceEEeeccccCCCChhhHh
Q psy8846 353 GPVSMYLPQIWVQE-KGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE-GENLMYEPCDIFVPAAVEKVITKNNAH 430 (568)
Q Consensus 353 GnVG~~~A~~L~~~-GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~-~~~ll~~~cDIliPaAl~~~It~~na~ 430 (568)
|++|...++.|.+. ++++++|+|. |.++..+..++.|. ...++ .++++..++|+++-|. .+..+.+.+.
T Consensus 10 G~~g~~~~~~l~~~~~~~~~~v~d~--~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~D~V~i~t-p~~~h~~~~~ 80 (325)
T 2ho3_A 10 GAISHHFIEAAHTSGEYQLVAIYSR--KLETAATFASRYQN------IQLFDQLEVFFKSSFDLVYIAS-PNSLHFAQAK 80 (325)
T ss_dssp SHHHHHHHHHHHHTTSEEEEEEECS--SHHHHHHHGGGSSS------CEEESCHHHHHTSSCSEEEECS-CGGGHHHHHH
T ss_pred CHHHHHHHHHHHhCCCeEEEEEEeC--CHHHHHHHHHHcCC------CeEeCCHHHHhCCCCCEEEEeC-ChHHHHHHHH
Confidence 89999999998875 7899999875 77777666666542 12222 2455555789888774 3444444444
Q ss_pred c-cc--ceEEEe
Q psy8846 431 K-IQ--AKIIAE 439 (568)
Q Consensus 431 ~-i~--AkiIvE 439 (568)
. ++ ..+++|
T Consensus 81 ~al~~gk~V~~E 92 (325)
T 2ho3_A 81 AALSAGKHVILE 92 (325)
T ss_dssp HHHHTTCEEEEE
T ss_pred HHHHcCCcEEEe
Confidence 3 22 347777
No 248
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=33.71 E-value=17 Score=35.76 Aligned_cols=39 Identities=3% Similarity=-0.086 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCC
Q psy8846 354 PVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGT 392 (568)
Q Consensus 354 nVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~ 392 (568)
-+|.++|+.|++.|++|+.+.-..-..+.+.+...+.+.
T Consensus 43 GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~ 81 (296)
T 3k31_A 43 SLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGV 81 (296)
T ss_dssp SHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCC
Confidence 799999999999999988754221122344444444443
No 249
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=33.50 E-value=18 Score=36.66 Aligned_cols=34 Identities=6% Similarity=-0.050 Sum_probs=26.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|++|..+|..|++.|..|+.+ +.+.+.+....+.
T Consensus 24 G~mG~~la~~L~~~G~~V~~~---~r~~~~~~~l~~~ 57 (366)
T 1evy_A 24 GAFGTALAMVLSKKCREVCVW---HMNEEEVRLVNEK 57 (366)
T ss_dssp SHHHHHHHHHHTTTEEEEEEE---CSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCEEEEE---ECCHHHHHHHHHc
Confidence 999999999999999887763 4566666665554
No 250
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=33.24 E-value=25 Score=34.19 Aligned_cols=26 Identities=8% Similarity=0.184 Sum_probs=23.1
Q ss_pred eeec----cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 349 KFSS----GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 349 R~~~----GnVG~~~A~~L~~~GakvvaVs 374 (568)
||+. |..|+++|+.|.+.||+|+.++
T Consensus 26 R~itN~SSg~iG~aiA~~~~~~Ga~V~l~~ 55 (226)
T 1u7z_A 26 RYISDHSSGKMGFAIAAAAARRGANVTLVS 55 (226)
T ss_dssp EEEEECCCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred eeccCCCccHHHHHHHHHHHHCCCEEEEEE
Confidence 6664 9999999999999999998875
No 251
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=33.10 E-value=46 Score=32.24 Aligned_cols=23 Identities=22% Similarity=0.013 Sum_probs=20.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPT 375 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD 375 (568)
|.+|+++++.|.+.|.+|+++..
T Consensus 13 G~iG~~l~~~L~~~g~~v~~~~r 35 (321)
T 1e6u_A 13 GMVGSAIRRQLEQRGDVELVLRT 35 (321)
T ss_dssp SHHHHHHHHHHTTCTTEEEECCC
T ss_pred cHHHHHHHHHHHhCCCeEEEEec
Confidence 89999999999999999888653
No 252
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=32.84 E-value=41 Score=33.38 Aligned_cols=62 Identities=10% Similarity=-0.009 Sum_probs=42.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeeccccCCCChhhHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAAVEKVITKNNAHK 431 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaAl~~~It~~na~~ 431 (568)
|++|..+++. . +.++++|.| ++-|.+ +.... +-++++. ++|+++=||....+.+.-.+-
T Consensus 21 GaIG~~v~~~--~-~leLv~v~~------------~k~gel----gv~a~~d~d~lla-~pD~VVe~A~~~av~e~~~~i 80 (253)
T 1j5p_A 21 GNIGKKLVEL--G-NFEKIYAYD------------RISKDI----PGVVRLDEFQVPS-DVSTVVECASPEAVKEYSLQI 80 (253)
T ss_dssp SHHHHHHHHH--S-CCSEEEEEC------------SSCCCC----SSSEECSSCCCCT-TCCEEEECSCHHHHHHHHHHH
T ss_pred CHHHHHHHhc--C-CcEEEEEEe------------cccccc----CceeeCCHHHHhh-CCCEEEECCCHHHHHHHHHHH
Confidence 9999999998 4 999999886 122222 33333 3578886 999999999766555444444
Q ss_pred ccc
Q psy8846 432 IQA 434 (568)
Q Consensus 432 i~A 434 (568)
|++
T Consensus 81 L~a 83 (253)
T 1j5p_A 81 LKN 83 (253)
T ss_dssp TTS
T ss_pred HHC
Confidence 444
No 253
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=32.40 E-value=17 Score=35.55 Aligned_cols=32 Identities=0% Similarity=-0.147 Sum_probs=23.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEY 386 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~ 386 (568)
|-+|.++|+.|++.|++|+.+.-. +.+.+.+.
T Consensus 39 ~GIG~aia~~la~~G~~V~~~~~~--~~~~~~~~ 70 (280)
T 4da9_A 39 RGIGLGIARALAASGFDIAITGIG--DAEGVAPV 70 (280)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESC--CHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCC--CHHHHHHH
Confidence 789999999999999999885422 44444443
No 254
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=32.25 E-value=15 Score=35.30 Aligned_cols=22 Identities=5% Similarity=-0.120 Sum_probs=19.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.++
T Consensus 17 ~GIG~aia~~l~~~G~~V~~~~ 38 (252)
T 3h7a_A 17 DYIGAEIAKKFAAEGFTVFAGR 38 (252)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred chHHHHHHHHHHHCCCEEEEEe
Confidence 6799999999999999988853
No 255
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=32.18 E-value=26 Score=34.50 Aligned_cols=77 Identities=16% Similarity=0.141 Sum_probs=51.7
Q ss_pred cCHHHH-HHHHHHH-CCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCCCChhhHh
Q psy8846 353 GPVSMY-LPQIWVQ-EKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAH 430 (568)
Q Consensus 353 GnVG~~-~A~~L~~-~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~It~~na~ 430 (568)
|++|.. .++.|.+ .|+++++|+|. |.+.+.+..++.|--. |. +.++++. ++|+++-| +.+..+.+.+.
T Consensus 15 G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~~~~~~~-~~-----~~~~ll~-~~D~V~i~-tp~~~h~~~~~ 84 (308)
T 3uuw_A 15 GSIAQKAYLPILTKSERFEFVGAFTP--NKVKREKICSDYRIMP-FD-----SIESLAK-KCDCIFLH-SSTETHYEIIK 84 (308)
T ss_dssp SHHHHHHTHHHHTSCSSSEEEEEECS--CHHHHHHHHHHHTCCB-CS-----CHHHHHT-TCSEEEEC-CCGGGHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHHHHcCCCC-cC-----CHHHHHh-cCCEEEEe-CCcHhHHHHHH
Confidence 999985 8888876 68999999876 7777777776654211 21 2346777 89999876 44545555544
Q ss_pred cc---cceEEEe
Q psy8846 431 KI---QAKIIAE 439 (568)
Q Consensus 431 ~i---~AkiIvE 439 (568)
.. ...++||
T Consensus 85 ~al~~gk~vl~E 96 (308)
T 3uuw_A 85 ILLNLGVHVYVD 96 (308)
T ss_dssp HHHHTTCEEEEC
T ss_pred HHHHCCCcEEEc
Confidence 32 2357787
No 256
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=32.12 E-value=27 Score=35.09 Aligned_cols=33 Identities=6% Similarity=-0.169 Sum_probs=25.2
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYK 387 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~ 387 (568)
|-+|+++|+.|++.|++|+.+.. .+.+.+.+..
T Consensus 56 ~GIG~aia~~La~~G~~Vv~~~~--r~~~~~~~~~ 88 (328)
T 2qhx_A 56 KRLGRSIAEGLHAEGYAVCLHYH--RSAAEANALS 88 (328)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEES--SCHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEEcC--CCHHHHHHHH
Confidence 78999999999999999988431 4566555443
No 257
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=32.03 E-value=86 Score=32.19 Aligned_cols=32 Identities=6% Similarity=0.171 Sum_probs=25.7
Q ss_pred cCHHHHHHHHHHHC---CCeEeEeCCCCCCHHHHHH
Q psy8846 353 GPVSMYLPQIWVQE---KGKCPGLPTHTRKPLALEE 385 (568)
Q Consensus 353 GnVG~~~A~~L~~~---GakvvaVsD~GiD~~~L~~ 385 (568)
|.+|+.+.+.|.+. +..||+|.|. .|++.+..
T Consensus 11 G~IGr~v~r~l~~~~~~~~evvaInd~-~~~~~~~~ 45 (339)
T 3b1j_A 11 GRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAH 45 (339)
T ss_dssp SHHHHHHHHHHHHCSCCSEEEEEEECS-SCHHHHHH
T ss_pred CHHHHHHHHHHHhcCCCCeEEEEEecC-CCHHHHHH
Confidence 99999999999886 3899999986 47665443
No 258
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=31.99 E-value=51 Score=32.26 Aligned_cols=40 Identities=8% Similarity=0.007 Sum_probs=28.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGT 392 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~ 392 (568)
+-.|..+|+.|++.||+|+.+....-+.+.+.+..+..+.
T Consensus 17 ~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~ 56 (258)
T 4gkb_A 17 SGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPR 56 (258)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCC
Confidence 4689999999999999999866554444444444444443
No 259
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=31.94 E-value=36 Score=34.10 Aligned_cols=142 Identities=8% Similarity=0.052 Sum_probs=77.7
Q ss_pred cCHHHHHHHHHHHCC-CeEeEeCCCCCCH------HHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeeccccCCC
Q psy8846 353 GPVSMYLPQIWVQEK-GKCPGLPTHTRKP------LALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAAVEKVI 424 (568)
Q Consensus 353 GnVG~~~A~~L~~~G-akvvaVsD~GiD~------~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaAl~~~I 424 (568)
|++|..+|+.|.+.| .+|++ .+.+. ++..+...+.| . .- +.++++ .+|||++-|--....
T Consensus 33 G~mG~~lA~~L~~~G~~~V~~---~dr~~~~~~~~~~~~~~~~~~g-------~-~~~s~~e~~-~~aDvVi~avp~~~~ 100 (317)
T 4ezb_A 33 GEAAQSIAGGLGGRNAARLAA---YDLRFNDPAASGALRARAAELG-------V-EPLDDVAGI-ACADVVLSLVVGAAT 100 (317)
T ss_dssp SHHHHHHHHHHHTTTCSEEEE---ECGGGGCTTTHHHHHHHHHHTT-------C-EEESSGGGG-GGCSEEEECCCGGGH
T ss_pred cHHHHHHHHHHHHcCCCeEEE---EeCCCccccchHHHHHHHHHCC-------C-CCCCHHHHH-hcCCEEEEecCCHHH
Confidence 999999999999999 88876 23343 12222222322 2 22 333443 479999988554433
Q ss_pred ChhhHh----ccc-ceEEEecCCcch--HHHHHHHhccCCCcc---c--------------cc--Cc-HHHHhhcc----
Q psy8846 425 TKNNAH----KIQ-AKIIAEAANESV--QESLERRFGNVGGRI---P--------------VT--PS-ESFQKRIS---- 473 (568)
Q Consensus 425 t~~na~----~i~-AkiIvE~AN~~~--~~~l~~~l~~~GggI---~--------------vv--Pd-e~~q~~~~---- 473 (568)
. +.+. .++ -++|+..++.+. ...+.+.+.+.|... + ++ ++ +.++....
T Consensus 101 ~-~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~~a~~g~l~i~vgg~~~~~~~~ll~~~g~ 179 (317)
T 4ezb_A 101 K-AVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARVPPYAEKVPILVAGRRAVEVAERLNALGM 179 (317)
T ss_dssp H-HHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCSTTTGGGSEEEEESTTHHHHHHHHHTTTC
T ss_pred H-HHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCchhhcCCEEEEEeCChHHHHHHHHHHhCC
Confidence 2 2233 332 467777766442 334444444443110 0 11 11 12222111
Q ss_pred ------C-CC---cHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCh
Q psy8846 474 ------G-AS---EKDIVHSGLDYTMERSARAIMKTAMKYNLGHLDI 510 (568)
Q Consensus 474 ------~-~w---e~e~V~~~L~~~M~~a~~~V~~~a~~~~~~~~dl 510 (568)
. .- -...+++-+...+...+.+....+++.+ +|.
T Consensus 180 ~v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~G---id~ 223 (317)
T 4ezb_A 180 NLEAVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAG---VTE 223 (317)
T ss_dssp EEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CHH
T ss_pred CeEEeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CCH
Confidence 0 01 1224667777888888999999999988 666
No 260
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=31.83 E-value=8.8 Score=36.70 Aligned_cols=24 Identities=0% Similarity=-0.179 Sum_probs=21.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTH 376 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~ 376 (568)
|-+|.++|+.|++.|++|+.+...
T Consensus 17 ~gIG~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 17 KGLGKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred chhHHHHHHHHHHCCCEEEEEcCC
Confidence 679999999999999999986543
No 261
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=31.77 E-value=1.3e+02 Score=30.77 Aligned_cols=86 Identities=7% Similarity=0.047 Sum_probs=50.4
Q ss_pred cCHHHHHHHHHHH---C-CCeEeEeCCCCCCHHHHHHHHH---hcCCccc----------CCCCe-ec----CCCCc-cc
Q psy8846 353 GPVSMYLPQIWVQ---E-KGKCPGLPTHTRKPLALEEYKL---DNGTIVG----------FPGAV-PY----EGENL-MY 409 (568)
Q Consensus 353 GnVG~~~A~~L~~---~-GakvvaVsD~GiD~~~L~~~~~---~~g~v~~----------~~ga~-~i----~~~~l-l~ 409 (568)
|.+|..+.+.|.+ . ...||+|.|. .|++.+....+ .+|...+ +.|.. .+ +++++ |.
T Consensus 11 G~iGr~l~r~l~~~~~~~~~eivai~~~-~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~l~~~ 89 (339)
T 2x5j_O 11 GRIGRNVVRALYESGRRAEITVVAINEL-ADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHERSLQSLPWR 89 (339)
T ss_dssp SHHHHHHHHHHHHTSGGGTEEEEEEECS-SCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGGCCHH
T ss_pred CHHHHHHHHHHHcCCCCCCEEEEEEeCC-CCHHHHHHHhcccccCCCCCceEEEcCCeeEECCEEEEEEecCChHHCccc
Confidence 9999999999988 4 7899999986 47765544332 2232110 01111 11 11222 32
Q ss_pred -ccceEEeeccccCCCChhhHhcc---cce-EEEec
Q psy8846 410 -EPCDIFVPAAVEKVITKNNAHKI---QAK-IIAEA 440 (568)
Q Consensus 410 -~~cDIliPaAl~~~It~~na~~i---~Ak-iIvE~ 440 (568)
.+|||++-| ++.-.+.+.++.. .|| +|+.+
T Consensus 90 ~~~vDvV~e~-tg~~~s~e~a~~~l~~GakkVVId~ 124 (339)
T 2x5j_O 90 ELGVDVVLDC-TGVYGSREHGEAHIAAGAKKVLFSH 124 (339)
T ss_dssp HHTCSEEEEC-SSSCCSHHHHHHHHHTTCSEEEESS
T ss_pred ccCCCEEEEC-CCccccHHHHHHHHHcCCCEEEEec
Confidence 479999987 4555666766654 244 45553
No 262
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=31.74 E-value=16 Score=35.19 Aligned_cols=24 Identities=8% Similarity=-0.121 Sum_probs=21.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTH 376 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~ 376 (568)
|-+|.++|+.|++.|++|+.+.+.
T Consensus 18 ~GIG~aia~~la~~G~~V~~~~~~ 41 (259)
T 3edm_A 18 RDIGRACAIRFAQEGANVVLTYNG 41 (259)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEECS
T ss_pred chHHHHHHHHHHHCCCEEEEEcCC
Confidence 679999999999999999987544
No 263
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=31.71 E-value=12 Score=36.34 Aligned_cols=22 Identities=5% Similarity=-0.231 Sum_probs=19.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.+.
T Consensus 25 ~gIG~a~a~~la~~G~~V~~~~ 46 (280)
T 3pgx_A 25 RGQGRSHAVRLAAEGADIIACD 46 (280)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred cHHHHHHHHHHHHCCCEEEEEe
Confidence 6799999999999999998853
No 264
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=31.62 E-value=14 Score=36.08 Aligned_cols=22 Identities=5% Similarity=-0.117 Sum_probs=19.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.+.
T Consensus 41 ~GIG~aia~~la~~G~~V~~~~ 62 (271)
T 3v2g_A 41 RGIGAAIAKRLALEGAAVALTY 62 (271)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred cHHHHHHHHHHHHCCCEEEEEe
Confidence 6799999999999999998864
No 265
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=31.40 E-value=26 Score=36.88 Aligned_cols=80 Identities=13% Similarity=-0.047 Sum_probs=51.4
Q ss_pred cCHHHHHHHHHHHC--CCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCccc-ccceEEeeccccCCCChhh
Q psy8846 353 GPVSMYLPQIWVQE--KGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMY-EPCDIFVPAAVEKVITKNN 428 (568)
Q Consensus 353 GnVG~~~A~~L~~~--GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~-~~cDIliPaAl~~~It~~n 428 (568)
|.+|...++.|.+. ++++|+|+|. |.+++.+..++.|. +....+ +.++++. .++|+++-|. .+..+.+.
T Consensus 33 G~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a~~~g~----~~~~~~~~~~~ll~~~~vD~V~i~t-p~~~H~~~ 105 (438)
T 3btv_A 33 GWAIKTHYPAILQLSSQFQITALYSP--KIETSIATIQRLKL----SNATAFPTLESFASSSTIDMIVIAI-QVASHYEV 105 (438)
T ss_dssp SSTTTTHHHHHHHTTTTEEEEEEECS--SHHHHHHHHHHTTC----TTCEEESSHHHHHHCSSCSEEEECS-CHHHHHHH
T ss_pred ChHHHHHHHHHHhcCCCeEEEEEEeC--CHHHHHHHHHHcCC----CcceeeCCHHHHhcCCCCCEEEEeC-CcHHHHHH
Confidence 67888888888876 8999999876 77777777666542 222233 2346665 4789988874 34344444
Q ss_pred Hh-cccc--------eEEEe
Q psy8846 429 AH-KIQA--------KIIAE 439 (568)
Q Consensus 429 a~-~i~A--------kiIvE 439 (568)
+. -+++ .++||
T Consensus 106 ~~~al~aG~~~~~~khVl~E 125 (438)
T 3btv_A 106 VMPLLEFSKNNPNLKYLFVE 125 (438)
T ss_dssp HHHHHHHGGGCTTCCEEEEE
T ss_pred HHHHHHCCCCcccceeEEec
Confidence 43 2333 38888
No 266
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=31.38 E-value=27 Score=33.15 Aligned_cols=22 Identities=5% Similarity=-0.009 Sum_probs=19.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|.+.|++|+.++
T Consensus 14 ~giG~~ia~~l~~~G~~V~~~~ 35 (255)
T 2q2v_A 14 SGIGLGIAQVLARAGANIVLNG 35 (255)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEC
T ss_pred cHHHHHHHHHHHHCCCEEEEEe
Confidence 7899999999999999988754
No 267
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=31.21 E-value=38 Score=33.50 Aligned_cols=78 Identities=12% Similarity=0.116 Sum_probs=49.6
Q ss_pred cCHHHHH-HHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCccc-ccceEEeeccccCCCChhhH
Q psy8846 353 GPVSMYL-PQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMY-EPCDIFVPAAVEKVITKNNA 429 (568)
Q Consensus 353 GnVG~~~-A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~-~~cDIliPaAl~~~It~~na 429 (568)
|++|... ++.|.+.|+++++|+|. |.+...+..++.|.. ..+ +.++++. .++|+++-|.- +..+.+.+
T Consensus 9 G~~g~~~~~~~l~~~~~~~vav~d~--~~~~~~~~~~~~g~~------~~~~~~~~~l~~~~~D~V~i~tp-~~~h~~~~ 79 (332)
T 2glx_A 9 STIAREWVIGAIRATGGEVVSMMST--SAERGAAYATENGIG------KSVTSVEELVGDPDVDAVYVSTT-NELHREQT 79 (332)
T ss_dssp CHHHHHTHHHHHHHTTCEEEEEECS--CHHHHHHHHHHTTCS------CCBSCHHHHHTCTTCCEEEECSC-GGGHHHHH
T ss_pred cHHHHHhhhHHhhcCCCeEEEEECC--CHHHHHHHHHHcCCC------cccCCHHHHhcCCCCCEEEEeCC-hhHhHHHH
Confidence 8999886 77777788999999876 777777766665421 112 2235555 36999888743 44444444
Q ss_pred hc-cc--ceEEEe
Q psy8846 430 HK-IQ--AKIIAE 439 (568)
Q Consensus 430 ~~-i~--AkiIvE 439 (568)
.. ++ ..+++|
T Consensus 80 ~~al~~Gk~v~~e 92 (332)
T 2glx_A 80 LAAIRAGKHVLCE 92 (332)
T ss_dssp HHHHHTTCEEEEC
T ss_pred HHHHHCCCeEEEe
Confidence 32 23 347777
No 268
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=31.10 E-value=2.6e+02 Score=27.54 Aligned_cols=103 Identities=9% Similarity=-0.005 Sum_probs=56.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCC--CeecCCCCccc--ccceEEeeccccCC-----
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPG--AVPYEGENLMY--EPCDIFVPAAVEKV----- 423 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~g--a~~i~~~~ll~--~~cDIliPaAl~~~----- 423 (568)
|.+|..++..|.+.|++-|.|.+ -+.++..+..++.+.. +++ ...++.+++-+ .++||+|=|---+.
T Consensus 136 GG~g~aia~~L~~~G~~~v~i~~--R~~~~a~~la~~~~~~--~~~~~i~~~~~~~l~~~l~~~DiVInaTp~Gm~~~~~ 211 (283)
T 3jyo_A 136 GGVGNAVAYALVTHGVQKLQVAD--LDTSRAQALADVINNA--VGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPG 211 (283)
T ss_dssp SHHHHHHHHHHHHTTCSEEEEEC--SSHHHHHHHHHHHHHH--HTSCCEEEECSTTHHHHHHHSSEEEECSSTTSTTSCS
T ss_pred cHHHHHHHHHHHHCCCCEEEEEE--CCHHHHHHHHHHHHhh--cCCceEEEcCHHHHHHHHhcCCEEEECCCCCCCCCCC
Confidence 88999999999999995444443 4666655544432110 111 22233334422 37999995543221
Q ss_pred --CChhhHhcc-cceEEEecCCcch-HHHHHHHhccCCCcccccCc
Q psy8846 424 --ITKNNAHKI-QAKIIAEAANESV-QESLERRFGNVGGRIPVTPS 465 (568)
Q Consensus 424 --It~~na~~i-~AkiIvE~AN~~~-~~~l~~~l~~~GggI~vvPd 465 (568)
|.. ..+ +..+|++-..+|. ++.|.+. +++ |..+++-
T Consensus 212 ~pi~~---~~l~~~~~v~DlvY~P~~T~ll~~A-~~~--G~~~~~G 251 (283)
T 3jyo_A 212 TAFDV---SCLTKDHWVGDVVYMPIETELLKAA-RAL--GCETLDG 251 (283)
T ss_dssp CSSCG---GGCCTTCEEEECCCSSSSCHHHHHH-HHH--TCCEECT
T ss_pred CCCCH---HHhCCCCEEEEecCCCCCCHHHHHH-HHC--cCeEeCc
Confidence 222 223 3568899998885 3333332 233 3445554
No 269
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=31.08 E-value=63 Score=31.64 Aligned_cols=21 Identities=0% Similarity=-0.184 Sum_probs=18.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEe
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGL 373 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaV 373 (568)
+-.|..+|+.|++.||+|+..
T Consensus 19 ~GIG~aiA~~la~~Ga~Vvi~ 39 (247)
T 4hp8_A 19 TGLGQAIAVGLAAAGAEVVCA 39 (247)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHcCCEEEEE
Confidence 568999999999999998774
No 270
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=30.92 E-value=21 Score=36.30 Aligned_cols=59 Identities=7% Similarity=-0.095 Sum_probs=34.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEK 422 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~ 422 (568)
|++|..+|+.|.+.|.+|++.. . +.+...+...+.| .+..+.++.+ .+|||++-|.-..
T Consensus 25 G~mG~alA~~L~~~G~~V~~~~-~--~~~~~~~~a~~~G-------~~~~~~~e~~-~~aDvVilavp~~ 83 (338)
T 1np3_A 25 GSQGHAHACNLKDSGVDVTVGL-R--SGSATVAKAEAHG-------LKVADVKTAV-AAADVVMILTPDE 83 (338)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEC-C--TTCHHHHHHHHTT-------CEEECHHHHH-HTCSEEEECSCHH
T ss_pred hHHHHHHHHHHHHCcCEEEEEE-C--ChHHHHHHHHHCC-------CEEccHHHHH-hcCCEEEEeCCcH
Confidence 9999999999999999877633 2 2222222223332 2222222333 3788888775443
No 271
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=30.87 E-value=68 Score=30.20 Aligned_cols=36 Identities=25% Similarity=0.222 Sum_probs=24.6
Q ss_pred cCHHHHHHHHHHHCCCe-EeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGK-CPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~Gak-vvaVsD~GiD~~~L~~~~~~ 389 (568)
|-+|.++|+.|++.|++ |+.+ +..-+.+.+.+..+.
T Consensus 15 ~gIG~~~a~~l~~~G~~~v~~~-~r~~~~~~~~~l~~~ 51 (254)
T 1sby_A 15 GGIGLDTSRELVKRNLKNFVIL-DRVENPTALAELKAI 51 (254)
T ss_dssp SHHHHHHHHHHHHTCCSEEEEE-ESSCCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHCCCcEEEEE-ecCchHHHHHHHHHh
Confidence 78999999999999997 5554 333333455554443
No 272
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=30.81 E-value=13 Score=35.11 Aligned_cols=30 Identities=7% Similarity=-0.044 Sum_probs=23.8
Q ss_pred cCHHHHHHHHHHH-CCCeEeEeCCCCCCHHHHHH
Q psy8846 353 GPVSMYLPQIWVQ-EKGKCPGLPTHTRKPLALEE 385 (568)
Q Consensus 353 GnVG~~~A~~L~~-~GakvvaVsD~GiD~~~L~~ 385 (568)
|-+|+++|+.|++ .|++|+.++ .+.+.+.+
T Consensus 14 ggIG~~~a~~L~~~~g~~V~~~~---r~~~~~~~ 44 (276)
T 1wma_A 14 KGIGLAIVRDLCRLFSGDVVLTA---RDVTRGQA 44 (276)
T ss_dssp SHHHHHHHHHHHHHSSSEEEEEE---SSHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCeEEEEe---CChHHHHH
Confidence 7899999999999 999998854 35555443
No 273
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=30.67 E-value=15 Score=35.67 Aligned_cols=23 Identities=0% Similarity=-0.246 Sum_probs=20.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPT 375 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD 375 (568)
|-+|.++|+.|++.|++|+.+.+
T Consensus 37 ~GIG~aia~~la~~G~~Vv~~~~ 59 (267)
T 3u5t_A 37 RGIGAAIAARLASDGFTVVINYA 59 (267)
T ss_dssp SHHHHHHHHHHHHHTCEEEEEES
T ss_pred CHHHHHHHHHHHHCCCEEEEEcC
Confidence 78999999999999999988643
No 274
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=30.57 E-value=24 Score=33.85 Aligned_cols=23 Identities=4% Similarity=-0.045 Sum_probs=21.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPT 375 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD 375 (568)
|.+|+++++.|.+.|++|++++-
T Consensus 22 G~iG~~l~~~L~~~g~~V~~~~r 44 (292)
T 1vl0_A 22 GQLGREIQKQLKGKNVEVIPTDV 44 (292)
T ss_dssp SHHHHHHHHHHTTSSEEEEEECT
T ss_pred ChHHHHHHHHHHhCCCeEEeccC
Confidence 89999999999999999999763
No 275
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=30.55 E-value=13 Score=35.78 Aligned_cols=22 Identities=5% Similarity=-0.219 Sum_probs=19.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.+.
T Consensus 20 ~gIG~~ia~~l~~~G~~V~~~~ 41 (287)
T 3pxx_A 20 RGQGRSHAVKLAEEGADIILFD 41 (287)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred ChHHHHHHHHHHHCCCeEEEEc
Confidence 6799999999999999998853
No 276
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=30.33 E-value=25 Score=34.28 Aligned_cols=78 Identities=9% Similarity=0.054 Sum_probs=43.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCCCChhhHhcc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAHKI 432 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~It~~na~~i 432 (568)
|++|..+++.|.+. ..|+.|.| .+.+.+.+..++.|. ..-+.++++ .+||+++-|.-... ..+.+..+
T Consensus 11 G~mG~~la~~l~~~-~~v~~v~~--~~~~~~~~~~~~~g~-------~~~~~~~~~-~~~DvVilav~~~~-~~~v~~~l 78 (276)
T 2i76_A 11 GTLTRFFLECLKDR-YEIGYILS--RSIDRARNLAEVYGG-------KAATLEKHP-ELNGVVFVIVPDRY-IKTVANHL 78 (276)
T ss_dssp CHHHHHHHHTTC-----CCCEEC--SSHHHHHHHHHHTCC-------CCCSSCCCC-C---CEEECSCTTT-HHHHHTTT
T ss_pred CHHHHHHHHHHHHc-CcEEEEEe--CCHHHHHHHHHHcCC-------ccCCHHHHH-hcCCEEEEeCChHH-HHHHHHHh
Confidence 99999999999877 77755554 467777666555432 111234444 37999998766554 45666665
Q ss_pred c--ceEEEecCC
Q psy8846 433 Q--AKIIAEAAN 442 (568)
Q Consensus 433 ~--AkiIvE~AN 442 (568)
. -++|+.-+.
T Consensus 79 ~~~~~ivi~~s~ 90 (276)
T 2i76_A 79 NLGDAVLVHCSG 90 (276)
T ss_dssp CCSSCCEEECCS
T ss_pred ccCCCEEEECCC
Confidence 2 346665553
No 277
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=30.21 E-value=31 Score=35.21 Aligned_cols=64 Identities=13% Similarity=0.196 Sum_probs=40.9
Q ss_pred cCHHHHHHHHHHH---------CCCeEeEeCCCC------CCHHHHHHHHHhcCCcccCCCCeecCCCCccc-ccceEEe
Q psy8846 353 GPVSMYLPQIWVQ---------EKGKCPGLPTHT------RKPLALEEYKLDNGTIVGFPGAVPYEGENLMY-EPCDIFV 416 (568)
Q Consensus 353 GnVG~~~A~~L~~---------~GakvvaVsD~G------iD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~-~~cDIli 416 (568)
|+||+..++.|.+ .+.+|++|+|+. +|.....+.+...+.+.. ..+.++++. .++||++
T Consensus 11 G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~-----~~d~~~ll~~~~iDvVv 85 (327)
T 3do5_A 11 GTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRD-----DAKAIEVVRSADYDVLI 85 (327)
T ss_dssp SHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSB-----CCCHHHHHHHSCCSEEE
T ss_pred cHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccC-----CCCHHHHhcCCCCCEEE
Confidence 9999999999976 488999999983 666554333222222111 112235554 4799998
Q ss_pred ecccc
Q psy8846 417 PAAVE 421 (568)
Q Consensus 417 PaAl~ 421 (568)
=|.-.
T Consensus 86 ~~tp~ 90 (327)
T 3do5_A 86 EASVT 90 (327)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 87543
No 278
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=29.97 E-value=27 Score=31.75 Aligned_cols=56 Identities=5% Similarity=-0.069 Sum_probs=35.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC-----CC-CcccccceEEeecccc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE-----GE-NLMYEPCDIFVPAAVE 421 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~-----~~-~ll~~~cDIliPaAl~ 421 (568)
|.+|+++++.|.+.|++|++++- +.+.+.+.. ++.+.+. .+ +.+ .+||++|=||-.
T Consensus 10 G~iG~~l~~~L~~~g~~V~~~~R---~~~~~~~~~---------~~~~~~~~D~~d~~~~~~-~~~d~vi~~ag~ 71 (221)
T 3ew7_A 10 GRAGSRILEEAKNRGHEVTAIVR---NAGKITQTH---------KDINILQKDIFDLTLSDL-SDQNVVVDAYGI 71 (221)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEES---CSHHHHHHC---------SSSEEEECCGGGCCHHHH-TTCSEEEECCCS
T ss_pred chhHHHHHHHHHhCCCEEEEEEc---Cchhhhhcc---------CCCeEEeccccChhhhhh-cCCCEEEECCcC
Confidence 88999999999999999999653 334443322 1222221 11 122 368999988754
No 279
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=29.81 E-value=38 Score=31.93 Aligned_cols=33 Identities=12% Similarity=0.011 Sum_probs=26.2
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|.+|+++|+.|++.|++|+.+ +.+.+.+.+..+
T Consensus 19 ~giG~~~a~~l~~~G~~V~~~---~r~~~~~~~~~~ 51 (253)
T 3qiv_A 19 GGIGQAYAEALAREGAAVVVA---DINAEAAEAVAK 51 (253)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHCCCEEEEE---cCCHHHHHHHHH
Confidence 789999999999999998884 456666655443
No 280
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=29.80 E-value=37 Score=34.40 Aligned_cols=32 Identities=9% Similarity=0.000 Sum_probs=27.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYK 387 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~ 387 (568)
|++|...|..|++.|..|+. .+.+.+.+.+..
T Consensus 15 G~MG~~iA~~la~~G~~V~l---~d~~~~~~~~~~ 46 (319)
T 2dpo_A 15 GLVGRSWAMLFASGGFRVKL---YDIEPRQITGAL 46 (319)
T ss_dssp SHHHHHHHHHHHHTTCCEEE---ECSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEE---EeCCHHHHHHHH
Confidence 99999999999999999888 567888776654
No 281
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=29.72 E-value=84 Score=31.46 Aligned_cols=62 Identities=18% Similarity=0.077 Sum_probs=40.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccC-CCCeec-CCCCcccccceEEeeccccC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGF-PGAVPY-EGENLMYEPCDIFVPAAVEK 422 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~-~ga~~i-~~~~ll~~~cDIliPaAl~~ 422 (568)
|..|+..|..|+ .|..|+. .+.+.+.+.+.++.- +... .+++.. +.++ -.+||+.|-|..++
T Consensus 21 G~MG~~iA~~la-aG~~V~v---~d~~~~~~~~~~~~l--~~~~~~~i~~~~~~~~--~~~aDlVieavpe~ 84 (293)
T 1zej_A 21 GLMGRGIAIAIA-SKHEVVL---QDVSEKALEAAREQI--PEELLSKIEFTTTLEK--VKDCDIVMEAVFED 84 (293)
T ss_dssp SHHHHHHHHHHH-TTSEEEE---ECSCHHHHHHHHHHS--CGGGGGGEEEESSCTT--GGGCSEEEECCCSC
T ss_pred CHHHHHHHHHHH-cCCEEEE---EECCHHHHHHHHHHH--HHHHhCCeEEeCCHHH--HcCCCEEEEcCcCC
Confidence 999999999999 9999888 567888888776650 0000 012222 2233 35788888776554
No 282
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=29.45 E-value=13 Score=35.88 Aligned_cols=22 Identities=5% Similarity=-0.094 Sum_probs=20.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.+.
T Consensus 35 ~gIG~~~a~~l~~~G~~v~~~~ 56 (269)
T 3gk3_A 35 GGLGAAISRRLHDAGMAVAVSH 56 (269)
T ss_dssp SHHHHHHHHHHHTTTCEEEEEE
T ss_pred chHHHHHHHHHHHCCCEEEEEc
Confidence 7899999999999999998864
No 283
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=29.39 E-value=81 Score=32.43 Aligned_cols=81 Identities=10% Similarity=0.076 Sum_probs=49.3
Q ss_pred cCHHHHHHHHHHHCC-CeEeEeCCC---CCCHHHHHHHHHhcCCcccC--CCCeecCCCCcccccceEEeeccccCCCCh
Q psy8846 353 GPVSMYLPQIWVQEK-GKCPGLPTH---TRKPLALEEYKLDNGTIVGF--PGAVPYEGENLMYEPCDIFVPAAVEKVITK 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~G-akvvaVsD~---GiD~~~L~~~~~~~g~v~~~--~ga~~i~~~~ll~~~cDIliPaAl~~~It~ 426 (568)
|.+|..+++.|.+.. .++++|.|. |...+.. ++.+.+. ..-..-+ ++.|. +||+++-| ++.-.+.
T Consensus 26 G~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~------~~~~~~~v~~dl~~~~-~~~~~-~vDvVf~a-tp~~~s~ 96 (359)
T 1xyg_A 26 GYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESV------FPHLRAQKLPTLVSVK-DADFS-TVDAVFCC-LPHGTTQ 96 (359)
T ss_dssp SHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHH------CGGGTTSCCCCCBCGG-GCCGG-GCSEEEEC-CCTTTHH
T ss_pred CHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHh------CchhcCcccccceecc-hhHhc-CCCEEEEc-CCchhHH
Confidence 899999999999875 599999875 5444332 2211111 0111112 44554 89999876 5666677
Q ss_pred hhHhccc--ceEEEecCC
Q psy8846 427 NNAHKIQ--AKIIAEAAN 442 (568)
Q Consensus 427 ~na~~i~--AkiIvE~AN 442 (568)
+.++..+ +++|--++.
T Consensus 97 ~~a~~~~aG~~VId~sa~ 114 (359)
T 1xyg_A 97 EIIKELPTALKIVDLSAD 114 (359)
T ss_dssp HHHHTSCTTCEEEECSST
T ss_pred HHHHHHhCCCEEEECCcc
Confidence 8877763 455544443
No 284
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=29.34 E-value=20 Score=35.29 Aligned_cols=21 Identities=5% Similarity=-0.048 Sum_probs=19.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEe
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGL 373 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaV 373 (568)
|-+|.++|+.|++.|++|+.+
T Consensus 59 ~GIG~aia~~la~~G~~V~~~ 79 (294)
T 3r3s_A 59 SGIGRAAAIAYAREGADVAIN 79 (294)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHHHCCCEEEEE
Confidence 789999999999999998774
No 285
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=29.08 E-value=1.8e+02 Score=29.54 Aligned_cols=87 Identities=15% Similarity=0.149 Sum_probs=51.9
Q ss_pred cCHHHHHHHHHHH-CCCeEeEeCCCCCCHHHHHHHHHhcCCccc-CCCC------------ee---c---CCCCc-c-cc
Q psy8846 353 GPVSMYLPQIWVQ-EKGKCPGLPTHTRKPLALEEYKLDNGTIVG-FPGA------------VP---Y---EGENL-M-YE 410 (568)
Q Consensus 353 GnVG~~~A~~L~~-~GakvvaVsD~GiD~~~L~~~~~~~g~v~~-~~ga------------~~---i---~~~~l-l-~~ 410 (568)
|.+|..+++.|.+ .+.+||+|.|.-.|.+.+.... +..++-+ |++. +. + +++++ | ..
T Consensus 12 G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~-~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~~~l~~~~~ 90 (335)
T 1u8f_O 12 GRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMF-QYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPSKIKWGDA 90 (335)
T ss_dssp SHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGGCCTTTT
T ss_pred CHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHh-hcccccCCCCCceEEcCCeEEECCeEEEEEecCCHHHCccccC
Confidence 9999999999876 5799999998424666554332 2222211 2221 11 1 22344 4 35
Q ss_pred cceEEeeccccCCCChhhHhcc-c--c-eEEEecC
Q psy8846 411 PCDIFVPAAVEKVITKNNAHKI-Q--A-KIIAEAA 441 (568)
Q Consensus 411 ~cDIliPaAl~~~It~~na~~i-~--A-kiIvE~A 441 (568)
+|||++-| ++.-.+.+.+... + | +|++++.
T Consensus 91 ~vDvV~ea-tg~~~~~e~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 91 GAEYVVES-TGVFTTMEKAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp TCCEEEEC-SSSCCSHHHHGGGGGGTCSEEEESSC
T ss_pred CCCEEEEC-CCchhhHHHHHHHHhCCCeEEEeccC
Confidence 89999987 5566677777654 3 3 3445544
No 286
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=28.99 E-value=43 Score=32.80 Aligned_cols=33 Identities=3% Similarity=-0.073 Sum_probs=27.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
+-.|..+|+.|++.||+|+. .+.+.+.+.+..+
T Consensus 17 ~GIG~aiA~~la~~Ga~Vv~---~~~~~~~~~~~~~ 49 (254)
T 4fn4_A 17 SGIGRAIAKKFALNDSIVVA---VELLEDRLNQIVQ 49 (254)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---EESCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCEEEE---EECCHHHHHHHHH
Confidence 46899999999999999887 4578887776554
No 287
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=28.91 E-value=53 Score=32.29 Aligned_cols=86 Identities=10% Similarity=0.046 Sum_probs=49.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCC--CHHHHHHHHHhcCCcccCCCC-----eecCCCCc--ccccceEEeeccccCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTR--KPLALEEYKLDNGTIVGFPGA-----VPYEGENL--MYEPCDIFVPAAVEKV 423 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~Gi--D~~~L~~~~~~~g~v~~~~ga-----~~i~~~~l--l~~~cDIliPaAl~~~ 423 (568)
|++|+.+|..|.+.|..|+.+ +. +.+.+....+. |.-..+ +. ...+.+++ .-.+||+++-|.-...
T Consensus 9 G~mG~~~a~~L~~~g~~V~~~---~r~~~~~~~~~~~~~-~~~~~~-g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~~~~ 83 (335)
T 1txg_A 9 GAMGSALSVPLVDNGNEVRIW---GTEFDTEILKSISAG-REHPRL-GVKLNGVEIFWPEQLEKCLENAEVVLLGVSTDG 83 (335)
T ss_dssp CHHHHHHHHHHHHHCCEEEEE---CCGGGHHHHHHHHTT-CCBTTT-TBCCCSEEEECGGGHHHHHTTCSEEEECSCGGG
T ss_pred CHHHHHHHHHHHhCCCeEEEE---EccCCHHHHHHHHHh-CcCccc-CccccceEEecHHhHHHHHhcCCEEEEcCChHH
Confidence 999999999999999988773 34 56666555443 311111 21 11211122 1247999998865543
Q ss_pred CChhhHhc---cc-ceEEEecCCcc
Q psy8846 424 ITKNNAHK---IQ-AKIIAEAANES 444 (568)
Q Consensus 424 It~~na~~---i~-AkiIvE~AN~~ 444 (568)
+ .+-+.. ++ -++|+.-.|+-
T Consensus 84 ~-~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 84 V-LPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp H-HHHHHHHTTTCCSCEEEECCCSE
T ss_pred H-HHHHHHHhcCCCCCEEEEEcCcC
Confidence 2 332222 43 35777777753
No 288
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=28.80 E-value=80 Score=33.45 Aligned_cols=86 Identities=14% Similarity=0.181 Sum_probs=55.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeecc-----ccCCCCh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAA-----VEKVITK 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaA-----l~~~It~ 426 (568)
|++|+.+|+.|...|++|++.. . + ... ...++... +.++++ ..|||++-|. ..+.|++
T Consensus 165 G~IG~~vA~~l~~~G~~V~~yd-~--~-----------~~~-~~~~~~~~~sl~ell-~~aDvV~lhvPlt~~T~~li~~ 228 (416)
T 3k5p_A 165 GNIGSQVGNLAESLGMTVRYYD-T--S-----------DKL-QYGNVKPAASLDELL-KTSDVVSLHVPSSKSTSKLITE 228 (416)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEC-T--T-----------CCC-CBTTBEECSSHHHHH-HHCSEEEECCCC-----CCBCH
T ss_pred CHHHHHHHHHHHHCCCEEEEEC-C--c-----------chh-cccCcEecCCHHHHH-hhCCEEEEeCCCCHHHhhhcCH
Confidence 9999999999999999999832 1 1 000 01123332 223443 4799999776 3478888
Q ss_pred hhHhccc-ceEEEecCCcch--HHHHHHHhc
Q psy8846 427 NNAHKIQ-AKIIAEAANESV--QESLERRFG 454 (568)
Q Consensus 427 ~na~~i~-AkiIvE~AN~~~--~~~l~~~l~ 454 (568)
+....++ -.+++..|-+++ .+.|.+.|.
T Consensus 229 ~~l~~mk~gailIN~aRG~vvd~~aL~~aL~ 259 (416)
T 3k5p_A 229 AKLRKMKKGAFLINNARGSDVDLEALAKVLQ 259 (416)
T ss_dssp HHHHHSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred HHHhhCCCCcEEEECCCChhhhHHHHHHHHH
Confidence 8888886 578888888774 334555543
No 289
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=28.73 E-value=24 Score=34.38 Aligned_cols=22 Identities=0% Similarity=0.031 Sum_probs=20.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.++
T Consensus 19 ~GIG~aia~~l~~~G~~V~~~~ 40 (285)
T 3sc4_A 19 RGIGLAIAKRVAADGANVALVA 40 (285)
T ss_dssp SHHHHHHHHHHHTTTCEEEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEE
Confidence 6799999999999999998865
No 290
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=28.64 E-value=41 Score=31.48 Aligned_cols=33 Identities=12% Similarity=0.055 Sum_probs=26.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..+
T Consensus 24 ~gIG~~ia~~l~~~G~~V~~~---~r~~~~~~~~~~ 56 (247)
T 3i1j_A 24 RGIGAAAARAYAAHGASVVLL---GRTEASLAEVSD 56 (247)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHCCCEEEEE---ecCHHHHHHHHH
Confidence 789999999999999999884 456666655443
No 291
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=28.62 E-value=40 Score=32.01 Aligned_cols=32 Identities=9% Similarity=0.002 Sum_probs=25.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYK 387 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~ 387 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..
T Consensus 22 ~gIG~aia~~l~~~G~~V~~~---~r~~~~~~~~~ 53 (252)
T 3f1l_A 22 DGIGREAAMTYARYGATVILL---GRNEEKLRQVA 53 (252)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHH
T ss_pred ChHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHH
Confidence 679999999999999999884 45666665543
No 292
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=28.59 E-value=24 Score=37.74 Aligned_cols=70 Identities=10% Similarity=-0.118 Sum_probs=44.6
Q ss_pred cCHHHHHHHHHHHC--CCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC-CCCccc-ccceEEeeccccCCCChhh
Q psy8846 353 GPVSMYLPQIWVQE--KGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE-GENLMY-EPCDIFVPAAVEKVITKNN 428 (568)
Q Consensus 353 GnVG~~~A~~L~~~--GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~-~~~ll~-~~cDIliPaAl~~~It~~n 428 (568)
|.+|...++.|.+. |++|++|+|. |.++..+..++.| .++...++ .+++++ .++|+++=|. .+..+.+.
T Consensus 52 G~~g~~h~~~l~~~~~~~~lvav~d~--~~~~a~~~a~~~g----~~~~~~~~d~~ell~~~~vD~V~I~t-p~~~H~~~ 124 (479)
T 2nvw_A 52 SWVAKTHFLAIQQLSSQFQIVALYNP--TLKSSLQTIEQLQ----LKHATGFDSLESFAQYKDIDMIVVSV-KVPEHYEV 124 (479)
T ss_dssp SHHHHTHHHHHHHTTTTEEEEEEECS--CHHHHHHHHHHTT----CTTCEEESCHHHHHHCTTCSEEEECS-CHHHHHHH
T ss_pred CHHHHHHHHHHHhcCCCeEEEEEEeC--CHHHHHHHHHHcC----CCcceeeCCHHHHhcCCCCCEEEEcC-CcHHHHHH
Confidence 66788788888875 8999999876 7777777777654 22222332 346665 4688887763 33333443
Q ss_pred H
Q psy8846 429 A 429 (568)
Q Consensus 429 a 429 (568)
+
T Consensus 125 ~ 125 (479)
T 2nvw_A 125 V 125 (479)
T ss_dssp H
T ss_pred H
Confidence 3
No 293
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=28.49 E-value=15 Score=34.38 Aligned_cols=31 Identities=13% Similarity=-0.096 Sum_probs=23.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEE 385 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~ 385 (568)
|-+|+++|+.|.+.|++|+.+.+. +.+.+.+
T Consensus 11 ggiG~~la~~l~~~G~~v~~~~~r--~~~~~~~ 41 (244)
T 1edo_A 11 RGIGKAIALSLGKAGCKVLVNYAR--SAKAAEE 41 (244)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESS--CHHHHHH
T ss_pred chHHHHHHHHHHHCCCEEEEEcCC--CHHHHHH
Confidence 789999999999999999885322 4444443
No 294
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=28.42 E-value=29 Score=31.69 Aligned_cols=58 Identities=10% Similarity=-0.025 Sum_probs=36.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC-----CCCcccccceEEeecccc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE-----GENLMYEPCDIFVPAAVE 421 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~-----~~~ll~~~cDIliPaAl~ 421 (568)
|.+|+++++.|.+.|++|++++ -+.+.+.+.... +.+.+. .++-.-.+||++|=||-.
T Consensus 10 G~iG~~l~~~L~~~g~~V~~~~---R~~~~~~~~~~~--------~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 10 GRAGSAIVAEARRRGHEVLAVV---RDPQKAADRLGA--------TVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHTCT--------TSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred CHHHHHHHHHHHHCCCEEEEEE---ecccccccccCC--------CceEEecccccccHhhcccCCEEEECCcc
Confidence 8999999999999999999965 345555433221 222221 111112368999888754
No 295
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=28.33 E-value=2.9e+02 Score=25.46 Aligned_cols=125 Identities=10% Similarity=0.017 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHCCCeEeEeCC-CCCCHHHHHHHHHhcCCcccC-CCCeecCCCCcccccceEEeeccccCCCChhhHh--
Q psy8846 355 VSMYLPQIWVQEKGKCPGLPT-HTRKPLALEEYKLDNGTIVGF-PGAVPYEGENLMYEPCDIFVPAAVEKVITKNNAH-- 430 (568)
Q Consensus 355 VG~~~A~~L~~~GakvvaVsD-~GiD~~~L~~~~~~~g~v~~~-~ga~~i~~~~ll~~~cDIliPaAl~~~It~~na~-- 430 (568)
....+++.|++.|..||.=.- .|||-..-....+..|.+.+. |.. +.++....++.+++.-. ....|.-
T Consensus 33 ~A~~lg~~La~~g~~lVsGGg~~Gim~aa~~gAl~~gG~tigVlP~~----~~~~~~~~~~~~i~~~~---~~~Rk~~m~ 105 (176)
T 2iz6_A 33 MANELGKQIATHGWILLTGGRSLGVMHEAMKGAKEAGGTTIGVLPGP----DTSEISDAVDIPIVTGL---GSARDNINA 105 (176)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSSSHHHHHHHHHHHTTCCEEEEECC---------CCTTCSEEEECCC---CSSSCCCCG
T ss_pred HHHHHHHHHHHCCCEEEECCCccCHhHHHHHHHHHcCCEEEEEeCch----hhhhhccCCceeEEcCC---HHHHHHHHH
Confidence 455566677788877664222 477777666666666655543 432 22333334455555422 2222322
Q ss_pred -cccceEEEecCCcchHHHHHHHhccCCCcccccCcHHHH--h--------hccCCCcHHHHHHHHHHHH
Q psy8846 431 -KIQAKIIAEAANESVQESLERRFGNVGGRIPVTPSESFQ--K--------RISGASEKDIVHSGLDYTM 489 (568)
Q Consensus 431 -~i~AkiIvE~AN~~~~~~l~~~l~~~GggI~vvPde~~q--~--------~~~~~we~e~V~~~L~~~M 489 (568)
.=.|=||++|.-+.+++..+..... .-|.++|. |-. . ......+.|++.+.|++.+
T Consensus 106 ~~sda~IvlpGg~GTL~E~~~al~~~--kpV~~l~~-~~~~~gfi~~~~~~~i~~~~~~~e~~~~l~~~~ 172 (176)
T 2iz6_A 106 LSSNVLVAVGMGPGTAAEVALALKAK--KPVVLLGT-QPEAEKFFTSLDAGLVHVAADVAGAIAAVKQLL 172 (176)
T ss_dssp GGCSEEEEESCCHHHHHHHHHHHHTT--CCEEEESC-CHHHHHHHHHHCTTTEEEESSHHHHHHHHHHHH
T ss_pred HhCCEEEEecCCccHHHHHHHHHHhC--CcEEEEcC-cccccccCChhhcCeEEEcCCHHHHHHHHHHHH
Confidence 2246688888766666655443222 24777776 321 0 1122356666666665543
No 296
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=28.23 E-value=30 Score=35.43 Aligned_cols=86 Identities=15% Similarity=0.215 Sum_probs=51.1
Q ss_pred cCHHHHHHHHHHHC-CCeEeEeCCCCCCHHHHHHHHHhcCCcccCCC--Ce-ecC---------CCCcccccceEEeecc
Q psy8846 353 GPVSMYLPQIWVQE-KGKCPGLPTHTRKPLALEEYKLDNGTIVGFPG--AV-PYE---------GENLMYEPCDIFVPAA 419 (568)
Q Consensus 353 GnVG~~~A~~L~~~-GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~g--a~-~i~---------~~~ll~~~cDIliPaA 419 (568)
|.+|..+++.|.+. +.++++|+|...+ .......+.| +.-|.+ .. .+. .++++ .+||+++-|
T Consensus 10 G~iG~~~~r~L~~~p~~elvav~d~~~~--~~~~~a~~~g-~~~~~~~~~~~~~~~~~v~v~~~~e~l~-~~vDvV~~a- 84 (340)
T 1b7g_O 10 GTIGKRVADAIIKQPDMKLVGVAKTSPN--YEAFIAHRRG-IRIYVPQQSIKKFEESGIPVAGTVEDLI-KTSDIVVDT- 84 (340)
T ss_dssp SHHHHHHHHHHHTCTTEEEEEEECSSCS--HHHHHHHHTT-CCEECCGGGHHHHHTTTCCCCCCHHHHH-HHCSEEEEC-
T ss_pred CHHHHHHHHHHHcCCCCEEEEEEcCChH--HHHHHHHhcC-cceecCcCHHHHhcccccccccCHhHhh-cCCCEEEEC-
Confidence 89999999999874 7899999986433 2222222222 111111 00 000 01111 279999987
Q ss_pred ccCCCChhhHhc---ccceEEEecCCc
Q psy8846 420 VEKVITKNNAHK---IQAKIIAEAANE 443 (568)
Q Consensus 420 l~~~It~~na~~---i~AkiIvE~AN~ 443 (568)
++.-.+.++++. -.+|+|.-+++.
T Consensus 85 Tp~~~s~~~a~~~~~aG~kvV~~sa~~ 111 (340)
T 1b7g_O 85 TPNGVGAQYKPIYLQLQRNAIFQGGEK 111 (340)
T ss_dssp CSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred CCCchhHHHHHHHHHcCCeEEEeCCCC
Confidence 667777777763 357888888773
No 297
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=28.20 E-value=32 Score=35.25 Aligned_cols=82 Identities=11% Similarity=0.074 Sum_probs=49.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec--CCCCccc--ccceEEeeccccCC-----
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY--EGENLMY--EPCDIFVPAAVEKV----- 423 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i--~~~~ll~--~~cDIliPaAl~~~----- 423 (568)
|.+|..+++.+...|++|++ .+.+.+++....+..+.- ...+ +.+++-+ ..+||+|=|+....
T Consensus 176 GgvG~~aa~~a~~~Ga~V~v---~dr~~~r~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~~~ 247 (361)
T 1pjc_A 176 GVVGTEAAKMAVGLGAQVQI---FDINVERLSYLETLFGSR-----VELLYSNSAEIETAVAEADLLIGAVLVPGRRAPI 247 (361)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---EESCHHHHHHHHHHHGGG-----SEEEECCHHHHHHHHHTCSEEEECCCCTTSSCCC
T ss_pred CHHHHHHHHHHHhCCCEEEE---EeCCHHHHHHHHHhhCce-----eEeeeCCHHHHHHHHcCCCEEEECCCcCCCCCCe
Confidence 99999999999999998776 345777776655432210 0011 1111111 27999998875322
Q ss_pred -CChhhHhccc-ceEEEecCC
Q psy8846 424 -ITKNNAHKIQ-AKIIAEAAN 442 (568)
Q Consensus 424 -It~~na~~i~-AkiIvE~AN 442 (568)
++.+....++ -.+|+.-+.
T Consensus 248 li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 248 LVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp CBCHHHHTTSCTTCEEEETTC
T ss_pred ecCHHHHhhCCCCCEEEEEec
Confidence 4666666665 235555443
No 298
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=28.19 E-value=27 Score=33.74 Aligned_cols=22 Identities=0% Similarity=-0.052 Sum_probs=19.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.++
T Consensus 16 ~GIG~aia~~la~~G~~V~~~~ 37 (274)
T 3e03_A 16 RGIGLAIALRAARDGANVAIAA 37 (274)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred ChHHHHHHHHHHHCCCEEEEEe
Confidence 6799999999999999988764
No 299
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=28.14 E-value=1.1e+02 Score=31.54 Aligned_cols=77 Identities=16% Similarity=0.153 Sum_probs=47.2
Q ss_pred cCHHHHHHHHHHHC----CCeEeEeCCCCCCHHHHHHHHHhcCCccc-CCCC------------eec------CCCCc-c
Q psy8846 353 GPVSMYLPQIWVQE----KGKCPGLPTHTRKPLALEEYKLDNGTIVG-FPGA------------VPY------EGENL-M 408 (568)
Q Consensus 353 GnVG~~~A~~L~~~----GakvvaVsD~GiD~~~L~~~~~~~g~v~~-~~ga------------~~i------~~~~l-l 408 (568)
|.+|+.+.+.|.+. ...||+|.|. .|++.+.... ++.++-+ |++. +.+ +++++ |
T Consensus 10 GrIGr~v~r~l~~~~~~~~~evvaInd~-~~~~~~a~ll-~ydS~hg~f~~~v~~~~~~l~v~g~~i~v~~~~dp~~~~w 87 (335)
T 1obf_O 10 GRIGRNILRAHYEGGKSHDIEIVAINDL-GDPKTNAHLT-RYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRNPAQLPW 87 (335)
T ss_dssp SHHHHHHHHHHHHTTSCSSEEEEEEECS-SCHHHHHHHH-HEETTTEECSSCEEEETTEEEETTEEEEEECCSCGGGSCT
T ss_pred CHHHHHHHHHHHhcCCCCCcEEEEEeCC-CCHHHHHHHh-ccCCcCCCCCCCEEEeCCEEEECCEEEEEEEcCCcccCCc
Confidence 99999999999887 5899999997 5777654332 2222221 3221 111 11111 2
Q ss_pred -cccceEEeeccccCCCChhhHhcc
Q psy8846 409 -YEPCDIFVPAAVEKVITKNNAHKI 432 (568)
Q Consensus 409 -~~~cDIliPaAl~~~It~~na~~i 432 (568)
+..+||.+=| .+.-++.+.|+..
T Consensus 88 ~~~gvDiV~es-tG~f~s~e~a~~h 111 (335)
T 1obf_O 88 GALKVDVVLEC-TGFFTTKEKAGAH 111 (335)
T ss_dssp TTTTCSEEEEC-SSSCCSHHHHHHH
T ss_pred cccCCCEEEEc-cCccccHHHHHHH
Confidence 3588988876 4556677777644
No 300
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=27.88 E-value=15 Score=35.51 Aligned_cols=22 Identities=0% Similarity=-0.200 Sum_probs=19.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.+.
T Consensus 23 ~gIG~~ia~~l~~~G~~V~~~~ 44 (278)
T 3sx2_A 23 RGQGRAHAVRLAADGADIIAVD 44 (278)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred ChHHHHHHHHHHHCCCeEEEEe
Confidence 6899999999999999998853
No 301
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=27.81 E-value=51 Score=31.55 Aligned_cols=33 Identities=12% Similarity=0.025 Sum_probs=26.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..+
T Consensus 21 ~gIG~aia~~l~~~G~~V~~~---~r~~~~~~~~~~ 53 (264)
T 3ucx_A 21 PALGTTLARRCAEQGADLVLA---ARTVERLEDVAK 53 (264)
T ss_dssp TTHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCcCEEEEE---eCCHHHHHHHHH
Confidence 789999999999999999884 456666655443
No 302
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=27.80 E-value=16 Score=35.40 Aligned_cols=22 Identities=0% Similarity=-0.218 Sum_probs=19.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.+.
T Consensus 20 ~gIG~a~a~~l~~~G~~V~~~~ 41 (281)
T 3s55_A 20 RGMGRSHAVALAEAGADIAICD 41 (281)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred chHHHHHHHHHHHCCCeEEEEe
Confidence 6799999999999999988754
No 303
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=27.75 E-value=29 Score=33.52 Aligned_cols=22 Identities=14% Similarity=0.108 Sum_probs=20.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|+++++.|.+.|.+|++++
T Consensus 10 GfIG~~L~~~L~~~G~~V~~l~ 31 (298)
T 4b4o_A 10 GFIGTALTQLLNARGHEVTLVS 31 (298)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEE
Confidence 8899999999999999999976
No 304
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=27.59 E-value=55 Score=35.20 Aligned_cols=33 Identities=9% Similarity=-0.071 Sum_probs=28.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|++|..+|..|++.|..|+. .+.|.+.+.+..+
T Consensus 14 G~MG~~IA~~la~aG~~V~l---~D~~~e~l~~~~~ 46 (483)
T 3mog_A 14 GTMGAGIAEVAASHGHQVLL---YDISAEALTRAID 46 (483)
T ss_dssp SHHHHHHHHHHHHTTCCEEE---ECSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCeEEE---EECCHHHHHHHHH
Confidence 99999999999999999887 5678888776554
No 305
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=27.32 E-value=44 Score=31.47 Aligned_cols=34 Identities=15% Similarity=0.063 Sum_probs=27.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|-+|+++|+.|++.|++|+.+ +.+.+.+.+..++
T Consensus 13 ~GIG~a~a~~l~~~G~~V~~~---~r~~~~~~~~~~~ 46 (235)
T 3l6e_A 13 SGLGRALTIGLVERGHQVSMM---GRRYQRLQQQELL 46 (235)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEE---ECCHHHHHHHHHH
Confidence 679999999999999999884 4577777666554
No 306
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=27.24 E-value=35 Score=34.83 Aligned_cols=27 Identities=11% Similarity=0.014 Sum_probs=24.2
Q ss_pred eeec----cCHHHHHHHHHHHCCCeEeEeCC
Q psy8846 349 KFSS----GPVSMYLPQIWVQEKGKCPGLPT 375 (568)
Q Consensus 349 R~~~----GnVG~~~A~~L~~~GakvvaVsD 375 (568)
||+. |..|+++|+.+.++||.|+-|+-
T Consensus 57 RfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g 87 (313)
T 1p9o_A 57 RFLDNFSSGRRGATSAEAFLAAGYGVLFLYR 87 (313)
T ss_dssp EEEEECCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred eEecCCCCcHHHHHHHHHHHHCCCEEEEEec
Confidence 6665 99999999999999999999874
No 307
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=32.94 E-value=13 Score=34.90 Aligned_cols=78 Identities=14% Similarity=0.078 Sum_probs=43.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccccCCCChhhH---
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAVEKVITKNNA--- 429 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl~~~It~~na--- 429 (568)
|++|..+|+.|.+.|.+|+.+ |. +.+ ...+.. . +.+..+.++++ .+||+++-|.-...+ .+-.
T Consensus 28 G~mG~~la~~L~~~G~~V~~~-~r--~~~-~~~~~~-~-------g~~~~~~~~~~-~~aDvVilav~~~~~-~~v~~l~ 93 (201)
T 2yjz_A 28 GDFGKSLGLKMLQCGYSVVFG-SR--NPQ-VSSLLP-R-------GAEVLCYSEAA-SRSDVIVLAVHREHY-DFLAELA 93 (201)
Confidence 999999999999999887653 32 221 111111 1 22222333443 378998877544322 2221
Q ss_pred hcccceEEEecCCcc
Q psy8846 430 HKIQAKIIAEAANES 444 (568)
Q Consensus 430 ~~i~AkiIvE~AN~~ 444 (568)
+...-++|+.-+|+-
T Consensus 94 ~~~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 94 DSLKGRVLIDVSNNQ 108 (201)
Confidence 112345777777754
No 308
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=26.69 E-value=61 Score=34.40 Aligned_cols=33 Identities=9% Similarity=0.069 Sum_probs=28.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|.||..+|..|++.|..|++ .++|.+++....+
T Consensus 11 G~vG~~lA~~La~~G~~V~~---~D~~~~~v~~l~~ 43 (450)
T 3gg2_A 11 GYVGLVSATCFAELGANVRC---IDTDRNKIEQLNS 43 (450)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---ECSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCCEEEE---EECCHHHHHHHHc
Confidence 99999999999999999988 4678888777655
No 309
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=26.66 E-value=18 Score=34.81 Aligned_cols=31 Identities=3% Similarity=-0.125 Sum_probs=23.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEE 385 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~ 385 (568)
|-+|+++|+.|++.|++|+.+.+. +.+.+.+
T Consensus 36 ~gIG~a~a~~l~~~G~~V~~~~~~--~~~~~~~ 66 (272)
T 4e3z_A 36 RGIGAAVCRLAARQGWRVGVNYAA--NREAADA 66 (272)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESS--CHHHHHH
T ss_pred chHHHHHHHHHHHCCCEEEEEcCC--ChhHHHH
Confidence 789999999999999999775333 4444443
No 310
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=26.65 E-value=22 Score=33.96 Aligned_cols=23 Identities=13% Similarity=0.033 Sum_probs=21.2
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPT 375 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD 375 (568)
|.+|+++++.|.+.|++|++++-
T Consensus 15 G~iG~~l~~~L~~~g~~V~~~~r 37 (287)
T 3sc6_A 15 GQLGKQLQEELNPEEYDIYPFDK 37 (287)
T ss_dssp SHHHHHHHHHSCTTTEEEEEECT
T ss_pred CHHHHHHHHHHHhCCCEEEEecc
Confidence 89999999999999999999864
No 311
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=26.63 E-value=66 Score=31.86 Aligned_cols=67 Identities=6% Similarity=-0.010 Sum_probs=38.5
Q ss_pred cCHHHHHHHHHHHCC--CeEeEeCCCCCCHHHHHHHHHhcCCcccCC--CCeecCCC-CcccccceEEeeccccCC
Q psy8846 353 GPVSMYLPQIWVQEK--GKCPGLPTHTRKPLALEEYKLDNGTIVGFP--GAVPYEGE-NLMYEPCDIFVPAAVEKV 423 (568)
Q Consensus 353 GnVG~~~A~~L~~~G--akvvaVsD~GiD~~~L~~~~~~~g~v~~~~--ga~~i~~~-~ll~~~cDIliPaAl~~~ 423 (568)
|++|+.+|..|.+.| ..|+. .++|.+.+.......+....+. ..+....+ +.+ .+||+++-|+-...
T Consensus 10 G~~G~~la~~L~~~g~~~~V~l---~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~-~~aDvViiav~~~~ 81 (309)
T 1hyh_A 10 GNVGAAVAHGLIAQGVADDYVF---IDANEAKVKADQIDFQDAMANLEAHGNIVINDWAAL-ADADVVISTLGNIK 81 (309)
T ss_dssp SHHHHHHHHHHHHHTCCSEEEE---ECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGG-TTCSEEEECCSCGG
T ss_pred CHHHHHHHHHHHhCCCCCEEEE---EcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCHHHh-CCCCEEEEecCCcc
Confidence 999999999999988 56655 3457766655443211111111 12221111 222 48999999886543
No 312
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=26.55 E-value=38 Score=32.49 Aligned_cols=36 Identities=6% Similarity=-0.073 Sum_probs=28.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|-+|.++|+.|++.|++|+.+.-.+-+.+.+.+..+
T Consensus 21 ~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~ 56 (262)
T 3ksu_A 21 KNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKD 56 (262)
T ss_dssp SHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHH
T ss_pred chHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHH
Confidence 679999999999999999987545556666655544
No 313
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=26.54 E-value=46 Score=31.70 Aligned_cols=34 Identities=21% Similarity=0.180 Sum_probs=27.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..++
T Consensus 16 ~gIG~aia~~l~~~G~~V~~~---~r~~~~~~~~~~~ 49 (257)
T 3imf_A 16 SGMGKGMATRFAKEGARVVIT---GRTKEKLEEAKLE 49 (257)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHH
Confidence 679999999999999998884 4577777665543
No 314
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=26.47 E-value=46 Score=33.25 Aligned_cols=80 Identities=11% Similarity=0.062 Sum_probs=50.8
Q ss_pred cCHHHHHHHHHHH-CCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCccc-ccceEEeeccccCCCChhhHh
Q psy8846 353 GPVSMYLPQIWVQ-EKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMY-EPCDIFVPAAVEKVITKNNAH 430 (568)
Q Consensus 353 GnVG~~~A~~L~~-~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~-~~cDIliPaAl~~~It~~na~ 430 (568)
|++|...++.|.+ .++++++|+|. |.+...+..++.|-...|. +.++++. .++|+++-| +.+..+.+.+.
T Consensus 14 G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~~~~~~~~~~-----~~~~ll~~~~~D~V~i~-tp~~~h~~~~~ 85 (330)
T 3e9m_A 14 AQIVPRFVAGLRESAQAEVRGIASR--RLENAQKMAKELAIPVAYG-----SYEELCKDETIDIIYIP-TYNQGHYSAAK 85 (330)
T ss_dssp CTTHHHHHHHHHHSSSEEEEEEBCS--SSHHHHHHHHHTTCCCCBS-----SHHHHHHCTTCSEEEEC-CCGGGHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHHHHHHcCCCceeC-----CHHHHhcCCCCCEEEEc-CCCHHHHHHHH
Confidence 9999999999988 58999999876 5666666666653211111 2345554 478888876 44445555544
Q ss_pred cc---cceEEEec
Q psy8846 431 KI---QAKIIAEA 440 (568)
Q Consensus 431 ~i---~AkiIvE~ 440 (568)
.. ...++||-
T Consensus 86 ~al~~gk~vl~EK 98 (330)
T 3e9m_A 86 LALSQGKPVLLEK 98 (330)
T ss_dssp HHHHTTCCEEECS
T ss_pred HHHHCCCeEEEeC
Confidence 32 23477763
No 315
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=26.44 E-value=46 Score=31.72 Aligned_cols=33 Identities=6% Similarity=-0.082 Sum_probs=26.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..+
T Consensus 39 ~gIG~~la~~l~~~G~~V~~~---~r~~~~~~~~~~ 71 (262)
T 3rkr_A 39 RGIGAAIARKLGSLGARVVLT---ARDVEKLRAVER 71 (262)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHCCCEEEEE---ECCHHHHHHHHH
Confidence 789999999999999998884 456666655443
No 316
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=26.37 E-value=84 Score=30.24 Aligned_cols=37 Identities=5% Similarity=-0.101 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCC
Q psy8846 355 VSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGT 392 (568)
Q Consensus 355 VG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~ 392 (568)
+|.++|+.|++.|++|+.++-.- ..+.+.+...+.+.
T Consensus 40 IG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~~~ 76 (280)
T 3nrc_A 40 IAYGIAKAMHREGAELAFTYVGQ-FKDRVEKLCAEFNP 76 (280)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHcCCEEEEeeCch-HHHHHHHHHHhcCC
Confidence 99999999999999988754222 34666666565543
No 317
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=26.14 E-value=27 Score=34.06 Aligned_cols=33 Identities=3% Similarity=-0.020 Sum_probs=24.2
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYK 387 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~ 387 (568)
|-+|.++|+.|++.|++|+.+.-. +.+.+.+..
T Consensus 35 ~GIG~~ia~~la~~G~~V~~~~r~--~~~~~~~~~ 67 (281)
T 3v2h_A 35 SGIGLAIARTLAKAGANIVLNGFG--APDEIRTVT 67 (281)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECCC--CHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEEeCC--ChHHHHHHH
Confidence 789999999999999999885321 444444433
No 318
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=26.13 E-value=18 Score=35.15 Aligned_cols=22 Identities=5% Similarity=-0.171 Sum_probs=19.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.+.
T Consensus 38 ~gIG~aia~~la~~G~~V~~~~ 59 (269)
T 4dmm_A 38 RGIGRAIALELAAAGAKVAVNY 59 (269)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEe
Confidence 7899999999999999998743
No 319
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=26.04 E-value=47 Score=31.90 Aligned_cols=33 Identities=6% Similarity=-0.219 Sum_probs=25.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|-+|+++|+.|++.|++|+.+ +.+.+.+.+..+
T Consensus 22 ~GIG~~~a~~L~~~G~~V~~~---~r~~~~~~~~~~ 54 (311)
T 3o26_A 22 KGIGFEICKQLSSNGIMVVLT---CRDVTKGHEAVE 54 (311)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHH
T ss_pred chHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHH
Confidence 679999999999999999884 456666555443
No 320
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=26.01 E-value=49 Score=30.73 Aligned_cols=32 Identities=9% Similarity=-0.046 Sum_probs=24.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYK 387 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~ 387 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..
T Consensus 12 ~gIG~~ia~~l~~~G~~V~~~---~r~~~~~~~~~ 43 (235)
T 3l77_A 12 RGIGEAIARALARDGYALALG---ARSVDRLEKIA 43 (235)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHH
Confidence 679999999999999998874 34666655443
No 321
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=25.93 E-value=83 Score=33.00 Aligned_cols=87 Identities=9% Similarity=0.056 Sum_probs=56.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccccceEEeecc-----ccCCCCh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYEPCDIFVPAA-----VEKVITK 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaA-----l~~~It~ 426 (568)
|++|+.+|+.|...|++|++.. . ... .. ..+++.. +.++++ ..|||++-|. ..+.|++
T Consensus 154 G~IG~~vA~~l~~~G~~V~~~d-~--~~~---------~~---~~~~~~~~~l~ell-~~aDvV~l~~P~t~~t~~li~~ 217 (404)
T 1sc6_A 154 GHIGTQLGILAESLGMYVYFYD-I--ENK---------LP---LGNATQVQHLSDLL-NMSDVVSLHVPENPSTKNMMGA 217 (404)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEC-S--SCC---------CC---CTTCEECSCHHHHH-HHCSEEEECCCSSTTTTTCBCH
T ss_pred CHHHHHHHHHHHHCCCEEEEEc-C--Cch---------hc---cCCceecCCHHHHH-hcCCEEEEccCCChHHHHHhhH
Confidence 9999999999999999998832 1 100 00 1123333 223444 4799999885 4468888
Q ss_pred hhHhccc-ceEEEecCCcch--HHHHHHHhcc
Q psy8846 427 NNAHKIQ-AKIIAEAANESV--QESLERRFGN 455 (568)
Q Consensus 427 ~na~~i~-AkiIvE~AN~~~--~~~l~~~l~~ 455 (568)
+....++ -.+++..|-+++ .+.|.+.|.+
T Consensus 218 ~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~ 249 (404)
T 1sc6_A 218 KEISLMKPGSLLINASRGTVVDIPALADALAS 249 (404)
T ss_dssp HHHHHSCTTEEEEECSCSSSBCHHHHHHHHHT
T ss_pred HHHhhcCCCeEEEECCCChHHhHHHHHHHHHc
Confidence 8888886 467788887764 2345555543
No 322
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=25.90 E-value=17 Score=34.76 Aligned_cols=22 Identities=0% Similarity=-0.177 Sum_probs=19.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|.+.|++|+.++
T Consensus 12 ~gIG~~ia~~l~~~G~~V~~~~ 33 (258)
T 3a28_C 12 QGIGRGISEKLAADGFDIAVAD 33 (258)
T ss_dssp SHHHHHHHHHHHHHTCEEEEEE
T ss_pred cHHHHHHHHHHHHCCCEEEEEe
Confidence 6799999999999999988753
No 323
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=25.78 E-value=68 Score=34.51 Aligned_cols=67 Identities=15% Similarity=0.107 Sum_probs=41.4
Q ss_pred cCHHHHHHHHHHHC-CC-eEeEeCCCCCCHH----HHHHHHHhcCCcccC-------------CCCeecCCCCcccccce
Q psy8846 353 GPVSMYLPQIWVQE-KG-KCPGLPTHTRKPL----ALEEYKLDNGTIVGF-------------PGAVPYEGENLMYEPCD 413 (568)
Q Consensus 353 GnVG~~~A~~L~~~-Ga-kvvaVsD~GiD~~----~L~~~~~~~g~v~~~-------------~ga~~i~~~~ll~~~cD 413 (568)
|.||..+|..|++. |. .|++ .++|.+ ++.++.+..-.+.+| ++.-..+.+.-.-.+||
T Consensus 27 G~mG~~lA~~la~~~G~~~V~~---~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd~ea~~~aD 103 (478)
T 3g79_A 27 GYVGIPAAVLFADAPCFEKVLG---FQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPDFSRISELD 103 (478)
T ss_dssp STTHHHHHHHHHHSTTCCEEEE---ECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESCGGGGGGCS
T ss_pred CHHHHHHHHHHHHhCCCCeEEE---EECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCcHHHHhcCC
Confidence 99999999999999 99 9988 456776 666554321111001 23222333222235899
Q ss_pred EEeeccccC
Q psy8846 414 IFVPAAVEK 422 (568)
Q Consensus 414 IliPaAl~~ 422 (568)
+++-|.-..
T Consensus 104 vViiaVptp 112 (478)
T 3g79_A 104 AVTLAIQTP 112 (478)
T ss_dssp EEEECCCCC
T ss_pred EEEEecCCc
Confidence 999885433
No 324
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=25.62 E-value=48 Score=31.95 Aligned_cols=33 Identities=12% Similarity=-0.033 Sum_probs=26.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|-+|+++|+.|++.|++|+.+ +.+.+.+.+..+
T Consensus 21 ~gIG~aia~~l~~~G~~V~~~---~r~~~~~~~~~~ 53 (281)
T 3svt_A 21 SGIGKGVAAGLVAAGASVMIV---GRNPDKLAGAVQ 53 (281)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHH
Confidence 789999999999999998884 456666655443
No 325
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=25.56 E-value=36 Score=29.72 Aligned_cols=92 Identities=7% Similarity=0.067 Sum_probs=50.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC----CCCcc----cccceEEeeccccCCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE----GENLM----YEPCDIFVPAAVEKVI 424 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~----~~~ll----~~~cDIliPaAl~~~I 424 (568)
|.+|+.+++.|.+.|..|++|... +.+.+........ .+...+. +.+.| -.+||+++-|.-....
T Consensus 12 G~vG~~la~~L~~~g~~V~vid~~--~~~~~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~ 84 (153)
T 1id1_A 12 SILAINTILQLNQRGQNVTVISNL--PEDDIKQLEQRLG-----DNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDAD 84 (153)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECC--CHHHHHHHHHHHC-----TTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCHHH
T ss_pred CHHHHHHHHHHHHCCCCEEEEECC--ChHHHHHHHHhhc-----CCCeEEEcCCCCHHHHHHcChhhCCEEEEecCChHH
Confidence 999999999999999999986532 1333333322110 0111111 11222 2378988877544322
Q ss_pred C---hhhHhcc--cceEEEecCCcchHHHHHH
Q psy8846 425 T---KNNAHKI--QAKIIAEAANESVQESLER 451 (568)
Q Consensus 425 t---~~na~~i--~AkiIvE~AN~~~~~~l~~ 451 (568)
| ...+.++ ..++|+-.-|....+.|++
T Consensus 85 n~~~~~~a~~~~~~~~ii~~~~~~~~~~~l~~ 116 (153)
T 1id1_A 85 NAFVVLSAKDMSSDVKTVLAVSDSKNLNKIKM 116 (153)
T ss_dssp HHHHHHHHHHHTSSSCEEEECSSGGGHHHHHT
T ss_pred HHHHHHHHHHHCCCCEEEEEECCHHHHHHHHH
Confidence 2 2334444 2478887655555555543
No 326
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=25.48 E-value=13 Score=36.08 Aligned_cols=31 Identities=3% Similarity=0.072 Sum_probs=24.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEY 386 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~ 386 (568)
|.+|+++|+.|.+.|++|+++. -+.+.+.+.
T Consensus 54 ggIG~~la~~L~~~G~~V~~~~---r~~~~~~~~ 84 (285)
T 2c07_A 54 RGIGREIAKMLAKSVSHVICIS---RTQKSCDSV 84 (285)
T ss_dssp SHHHHHHHHHHTTTSSEEEEEE---SSHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCEEEEEc---CCHHHHHHH
Confidence 8999999999999999998843 345555443
No 327
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=25.44 E-value=20 Score=34.87 Aligned_cols=22 Identities=5% Similarity=-0.250 Sum_probs=19.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.++
T Consensus 33 ~gIG~aia~~L~~~G~~V~~~~ 54 (288)
T 2x9g_A 33 KRIGRAIAVKLHQTGYRVVIHY 54 (288)
T ss_dssp SHHHHHHHHHHHHHTCEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEe
Confidence 7899999999999999998853
No 328
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=25.41 E-value=17 Score=35.02 Aligned_cols=22 Identities=5% Similarity=-0.262 Sum_probs=19.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.+.
T Consensus 28 ~gIG~aia~~l~~~G~~V~~~~ 49 (270)
T 3is3_A 28 RGIGAAVAVHLGRLGAKVVVNY 49 (270)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred chHHHHHHHHHHHCCCEEEEEc
Confidence 6899999999999999998753
No 329
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=25.39 E-value=82 Score=31.54 Aligned_cols=25 Identities=20% Similarity=0.048 Sum_probs=20.5
Q ss_pred cCHHHH-HHHHHHHCCCeEeEeCCCCC
Q psy8846 353 GPVSMY-LPQIWVQEKGKCPGLPTHTR 378 (568)
Q Consensus 353 GnVG~~-~A~~L~~~GakvvaVsD~Gi 378 (568)
|..|.. +|++|++.|++|.+ +|..-
T Consensus 13 Gg~Gms~~A~~L~~~G~~V~~-~D~~~ 38 (326)
T 3eag_A 13 GGTFMGGLAAIAKEAGFEVSG-CDAKM 38 (326)
T ss_dssp CSHHHHHHHHHHHHTTCEEEE-EESSC
T ss_pred CHHHHHHHHHHHHhCCCEEEE-EcCCC
Confidence 889995 89999999999775 66643
No 330
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=25.32 E-value=62 Score=33.85 Aligned_cols=33 Identities=9% Similarity=-0.003 Sum_probs=27.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|+||..+|..|++.|..|++ .+.|.+.+....+
T Consensus 9 G~vG~~~A~~la~~G~~V~~---~d~~~~~~~~l~~ 41 (436)
T 1mv8_A 9 GYVGAVCAGCLSARGHEVIG---VDVSSTKIDLINQ 41 (436)
T ss_dssp STTHHHHHHHHHHTTCEEEE---ECSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHCCCEEEE---EECCHHHHHHHhC
Confidence 99999999999999999888 3567777766644
No 331
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=25.25 E-value=2e+02 Score=28.04 Aligned_cols=105 Identities=10% Similarity=0.033 Sum_probs=55.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCC---CCeecCCCCcccccceEEeeccccCCCCh-h-
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFP---GAVPYEGENLMYEPCDIFVPAAVEKVITK-N- 427 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~---ga~~i~~~~ll~~~cDIliPaAl~~~It~-~- 427 (568)
|.+|..+|+.|++.| +|+.+ +.+.+++.+..++.+...+.. .....+-.+.+ .++||+|-|+--+.... +
T Consensus 137 GgiG~aia~~L~~~G-~V~v~---~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~-~~~DilVn~ag~~~~~~~~~ 211 (287)
T 1nvt_A 137 GGAARAVAFELAKDN-NIIIA---NRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDL-DGVDIIINATPIGMYPNIDV 211 (287)
T ss_dssp SHHHHHHHHHHTSSS-EEEEE---CSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCC-TTCCEEEECSCTTCTTCCSS
T ss_pred hHHHHHHHHHHHHCC-CEEEE---ECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhh-CCCCEEEECCCCCCCCCCCC
Confidence 889999999999999 77663 346666655543321100000 00111112222 37999999986443210 0
Q ss_pred ----hHhccc-ceEEEecCCcch-HHHHHHHhccCCCcccccCc
Q psy8846 428 ----NAHKIQ-AKIIAEAANESV-QESLERRFGNVGGRIPVTPS 465 (568)
Q Consensus 428 ----na~~i~-AkiIvE~AN~~~-~~~l~~~l~~~GggI~vvPd 465 (568)
....++ ..+|++-..+|. ++.+. ...++| ..+++-
T Consensus 212 ~~~~~~~~l~~~~~v~Dv~y~p~~t~ll~-~a~~~G--~~~~~G 252 (287)
T 1nvt_A 212 EPIVKAEKLREDMVVMDLIYNPLETVLLK-EAKKVN--AKTING 252 (287)
T ss_dssp CCSSCSTTCCSSSEEEECCCSSSSCHHHH-HHHTTT--CEEECT
T ss_pred CCCCCHHHcCCCCEEEEeeeCCccCHHHH-HHHHCC--CEEeCc
Confidence 122343 467888876664 33333 334454 344443
No 332
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=25.19 E-value=37 Score=30.32 Aligned_cols=22 Identities=18% Similarity=-0.003 Sum_probs=20.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|.+|+++++.|.+.|++|++++
T Consensus 13 G~iG~~l~~~l~~~g~~V~~~~ 34 (206)
T 1hdo_A 13 GQTGLTTLAQAVQAGYEVTVLV 34 (206)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred cHHHHHHHHHHHHCCCeEEEEE
Confidence 8999999999999999999875
No 333
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=25.06 E-value=50 Score=32.00 Aligned_cols=33 Identities=12% Similarity=-0.004 Sum_probs=25.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..+
T Consensus 14 ~GIG~aia~~la~~G~~V~~~---~r~~~~~~~~~~ 46 (264)
T 3tfo_A 14 GGIGEGIARELGVAGAKILLG---ARRQARIEAIAT 46 (264)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESSHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEE---ECCHHHHHHHHH
Confidence 679999999999999999884 456666655443
No 334
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=25.01 E-value=33 Score=31.47 Aligned_cols=22 Identities=14% Similarity=-0.035 Sum_probs=20.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|.+|+++++.|.+.|.+|++++
T Consensus 14 G~iG~~l~~~L~~~g~~V~~~~ 35 (227)
T 3dhn_A 14 GFVGSALLNEALNRGFEVTAVV 35 (227)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEC
T ss_pred chHHHHHHHHHHHCCCEEEEEE
Confidence 8999999999999999999976
No 335
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=24.89 E-value=62 Score=34.13 Aligned_cols=67 Identities=7% Similarity=0.114 Sum_probs=47.3
Q ss_pred cCHHHHHHHHHHHCCC---eEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccccceEEeeccc-----cCCC
Q psy8846 353 GPVSMYLPQIWVQEKG---KCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYEPCDIFVPAAV-----EKVI 424 (568)
Q Consensus 353 GnVG~~~A~~L~~~Ga---kvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~~cDIliPaAl-----~~~I 424 (568)
|+||..+++.+...|| .|.. +|... ... |+. + +++ .++||+|=|++ ...|
T Consensus 224 G~vG~~A~~~a~~lGa~~~~V~v-----~D~~~-----~~~-------g~~-~--~~i--~~aDivIn~vlig~~aP~Lv 281 (394)
T 2qrj_A 224 GRCGSGAIDLLHKVGIPDANILK-----WDIKE-----TSR-------GGP-F--DEI--PQADIFINCIYLSKPIAPFT 281 (394)
T ss_dssp SHHHHHHHHHHHHTTCCGGGEEE-----ECHHH-----HTT-------CSC-C--THH--HHSSEEEECCCCCSSCCCSC
T ss_pred CHHHHHHHHHHHhCCCCcCceEE-----eeccc-----ccc-------CCc-h--hhH--hhCCEEEECcCcCCCCCccc
Confidence 8999999999999998 5544 34432 011 111 1 222 39999999998 5789
Q ss_pred ChhhHhcc-c-ceEEEecC
Q psy8846 425 TKNNAHKI-Q-AKIIAEAA 441 (568)
Q Consensus 425 t~~na~~i-~-AkiIvE~A 441 (568)
|.+-+.+. + -.+||+-|
T Consensus 282 t~e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 282 NMEKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp CHHHHCCTTCCCCEEEETT
T ss_pred CHHHHhcCcCCCeEEEEEe
Confidence 99999888 4 46777655
No 336
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=24.82 E-value=60 Score=32.25 Aligned_cols=32 Identities=9% Similarity=0.010 Sum_probs=25.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYK 387 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~ 387 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..
T Consensus 18 ~gIG~~la~~l~~~G~~Vv~~---~r~~~~~~~~~ 49 (319)
T 3ioy_A 18 NGVGIGLVRQLLNQGCKVAIA---DIRQDSIDKAL 49 (319)
T ss_dssp STHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCEEEEE---ECCHHHHHHHH
Confidence 789999999999999999884 45666655543
No 337
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=24.81 E-value=51 Score=32.07 Aligned_cols=33 Identities=18% Similarity=-0.005 Sum_probs=25.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..+
T Consensus 43 ~GIG~aia~~la~~G~~V~~~---~r~~~~~~~~~~ 75 (281)
T 4dry_A 43 TGVGRGIAQALSAEGYSVVIT---GRRPDVLDAAAG 75 (281)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEE---ECCHHHHHHHHH
Confidence 679999999999999999884 456666555443
No 338
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=24.77 E-value=42 Score=31.09 Aligned_cols=22 Identities=9% Similarity=-0.055 Sum_probs=20.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.++
T Consensus 16 ~gIG~~~a~~l~~~G~~V~~~~ 37 (223)
T 3uce_A 16 SGIGAELAKQLESEHTIVHVAS 37 (223)
T ss_dssp SHHHHHHHHHHCSTTEEEEEES
T ss_pred CHHHHHHHHHHHHCCCEEEEec
Confidence 6799999999999999998865
No 339
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=24.66 E-value=52 Score=31.46 Aligned_cols=33 Identities=3% Similarity=0.072 Sum_probs=26.2
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..+
T Consensus 20 ~gIG~aia~~l~~~G~~V~~~---~r~~~~~~~~~~ 52 (262)
T 3pk0_A 20 KGIGRGIATVFARAGANVAVA---GRSTADIDACVA 52 (262)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHH
Confidence 789999999999999999884 456666655443
No 340
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=24.56 E-value=51 Score=32.78 Aligned_cols=78 Identities=14% Similarity=0.067 Sum_probs=50.4
Q ss_pred cCHHHHHHHHHH-H-CCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC-CCCccc-ccceEEeeccccCCCChhh
Q psy8846 353 GPVSMYLPQIWV-Q-EKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE-GENLMY-EPCDIFVPAAVEKVITKNN 428 (568)
Q Consensus 353 GnVG~~~A~~L~-~-~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~-~~~ll~-~~cDIliPaAl~~~It~~n 428 (568)
|++|...++.|. + .|+++++|+|. |.+++.+..++.|.. ..++ .++++. .++|+++-| +.+..+.+.
T Consensus 17 G~ig~~~~~~l~~~~~~~~~vav~d~--~~~~~~~~a~~~g~~------~~~~~~~~~l~~~~~D~V~i~-tp~~~h~~~ 87 (346)
T 3cea_A 17 GRLGERHARHLVNKIQGVKLVAACAL--DSNQLEWAKNELGVE------TTYTNYKDMIDTENIDAIFIV-APTPFHPEM 87 (346)
T ss_dssp STTHHHHHHHHHHTCSSEEEEEEECS--CHHHHHHHHHTTCCS------EEESCHHHHHTTSCCSEEEEC-SCGGGHHHH
T ss_pred CHHHHHHHHHHHhcCCCcEEEEEecC--CHHHHHHHHHHhCCC------cccCCHHHHhcCCCCCEEEEe-CChHhHHHH
Confidence 999999999888 5 58999999875 777777666654321 2222 235554 379998876 444445555
Q ss_pred Hhcc-c--ceEEEe
Q psy8846 429 AHKI-Q--AKIIAE 439 (568)
Q Consensus 429 a~~i-~--AkiIvE 439 (568)
+... + ..+++|
T Consensus 88 ~~~al~~G~~v~~e 101 (346)
T 3cea_A 88 TIYAMNAGLNVFCE 101 (346)
T ss_dssp HHHHHHTTCEEEEC
T ss_pred HHHHHHCCCEEEEc
Confidence 4432 2 347776
No 341
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=24.50 E-value=52 Score=31.85 Aligned_cols=33 Identities=6% Similarity=-0.004 Sum_probs=26.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..+
T Consensus 34 ~GIG~aia~~la~~G~~V~~~---~r~~~~~~~~~~ 66 (279)
T 3sju_A 34 SGIGLAVARTLAARGIAVYGC---ARDAKNVSAAVD 66 (279)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHH
Confidence 689999999999999999874 356666655443
No 342
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=24.37 E-value=52 Score=31.50 Aligned_cols=32 Identities=13% Similarity=0.019 Sum_probs=25.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYK 387 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~ 387 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..
T Consensus 20 ~gIG~aia~~l~~~G~~V~~~---~r~~~~~~~~~ 51 (267)
T 3t4x_A 20 AGIGKAIATSLVAEGANVLIN---GRREENVNETI 51 (267)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESSHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHH
Confidence 679999999999999999884 45666655443
No 343
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=24.36 E-value=1e+02 Score=30.74 Aligned_cols=77 Identities=9% Similarity=0.052 Sum_probs=42.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCee-cCCCCcccccceEEeeccccCCCChhhHhc
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVP-YEGENLMYEPCDIFVPAAVEKVITKNNAHK 431 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~-i~~~~ll~~~cDIliPaAl~~~It~~na~~ 431 (568)
|.||..+++++...|++|+++.-+ .+++...+ +.| ++. +...+.+...+|+.+=|+-....-......
T Consensus 186 G~vG~~a~qla~~~Ga~Vi~~~~~---~~~~~~~~-~lG-------a~~v~~~~~~~~~~~D~vid~~g~~~~~~~~~~~ 254 (348)
T 3two_A 186 GGLGSMAVKYAVAMGAEVSVFARN---EHKKQDAL-SMG-------VKHFYTDPKQCKEELDFIISTIPTHYDLKDYLKL 254 (348)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECSS---STTHHHHH-HTT-------CSEEESSGGGCCSCEEEEEECCCSCCCHHHHHTT
T ss_pred cHHHHHHHHHHHHCCCeEEEEeCC---HHHHHHHH-hcC-------CCeecCCHHHHhcCCCEEEECCCcHHHHHHHHHH
Confidence 899999999999999999986533 22332222 222 221 122222333788888775544333333343
Q ss_pred cc--ceEEEec
Q psy8846 432 IQ--AKIIAEA 440 (568)
Q Consensus 432 i~--AkiIvE~ 440 (568)
++ .++|.=|
T Consensus 255 l~~~G~iv~~G 265 (348)
T 3two_A 255 LTYNGDLALVG 265 (348)
T ss_dssp EEEEEEEEECC
T ss_pred HhcCCEEEEEC
Confidence 32 4555443
No 344
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=24.34 E-value=53 Score=31.40 Aligned_cols=33 Identities=6% Similarity=0.021 Sum_probs=25.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..+
T Consensus 18 ~GIG~aia~~l~~~G~~V~~~---~r~~~~~~~~~~ 50 (265)
T 3lf2_A 18 SGIGLATVELLLEAGAAVAFC---ARDGERLRAAES 50 (265)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHH
Confidence 679999999999999998874 456666655443
No 345
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=24.23 E-value=1.5e+02 Score=28.86 Aligned_cols=27 Identities=7% Similarity=-0.071 Sum_probs=23.0
Q ss_pred cCHHHHHHHHHHHC-CCeEeEeCCCCCC
Q psy8846 353 GPVSMYLPQIWVQE-KGKCPGLPTHTRK 379 (568)
Q Consensus 353 GnVG~~~A~~L~~~-GakvvaVsD~GiD 379 (568)
|.+|+.+++.+.+. |..++++.|.+=|
T Consensus 10 G~mG~~i~~~~~~~~~~elva~~d~~~d 37 (245)
T 1p9l_A 10 GKVGTTMVRAVAAADDLTLSAELDAGDP 37 (245)
T ss_dssp SHHHHHHHHHHHHCTTCEEEEEECTTCC
T ss_pred CHHHHHHHHHHHhCCCCEEEEEEccCCC
Confidence 88999999999865 9999999987533
No 346
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=24.14 E-value=55 Score=30.95 Aligned_cols=33 Identities=9% Similarity=-0.033 Sum_probs=25.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|.+|.++|+.|++.|++|+.+ +.+.+.+.+..+
T Consensus 17 ~gIG~aia~~l~~~G~~V~~~---~r~~~~~~~~~~ 49 (247)
T 2jah_A 17 SGIGEATARALAAEGAAVAIA---ARRVEKLRALGD 49 (247)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEE---ECCHHHHHHHHH
Confidence 789999999999999999884 346666655443
No 347
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=24.09 E-value=45 Score=33.42 Aligned_cols=79 Identities=10% Similarity=0.085 Sum_probs=52.1
Q ss_pred cCHHHHHHHHHH-H-CCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeec-CCCCcccc-cceEEeeccccCCCChhh
Q psy8846 353 GPVSMYLPQIWV-Q-EKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPY-EGENLMYE-PCDIFVPAAVEKVITKNN 428 (568)
Q Consensus 353 GnVG~~~A~~L~-~-~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i-~~~~ll~~-~cDIliPaAl~~~It~~n 428 (568)
|++|...++.|. + .|+++++|+|. |.+.+.+..++.|- ....+ +.+++++. ++|+++-|. .+..+.+.
T Consensus 11 G~~g~~~~~~l~~~~~~~~l~av~d~--~~~~~~~~~~~~g~-----~~~~~~~~~~ll~~~~~D~V~i~t-p~~~h~~~ 82 (344)
T 3mz0_A 11 GAIGKEHINRITNKLSGAEIVAVTDV--NQEAAQKVVEQYQL-----NATVYPNDDSLLADENVDAVLVTS-WGPAHESS 82 (344)
T ss_dssp SHHHHHHHHHHHHTCSSEEEEEEECS--SHHHHHHHHHHTTC-----CCEEESSHHHHHHCTTCCEEEECS-CGGGHHHH
T ss_pred cHHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHHHHhCC-----CCeeeCCHHHHhcCCCCCEEEECC-CchhHHHH
Confidence 899999999888 5 58999999876 77777777777541 12233 23456653 689888764 55555555
Q ss_pred Hhcc-c--ceEEEe
Q psy8846 429 AHKI-Q--AKIIAE 439 (568)
Q Consensus 429 a~~i-~--AkiIvE 439 (568)
+... + ..++||
T Consensus 83 ~~~al~~Gk~vl~E 96 (344)
T 3mz0_A 83 VLKAIKAQKYVFCE 96 (344)
T ss_dssp HHHHHHTTCEEEEC
T ss_pred HHHHHHCCCcEEEc
Confidence 4432 2 356776
No 348
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=24.01 E-value=21 Score=33.62 Aligned_cols=103 Identities=14% Similarity=0.047 Sum_probs=57.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcc----cccceEEeeccccC---CCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLM----YEPCDIFVPAAVEK---VIT 425 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll----~~~cDIliPaAl~~---~It 425 (568)
|.+|..+|+.|.+.|. |++| |. |.+.+.... .| +.-+.| .. ++.+.| -.+||.++-|.-.. ...
T Consensus 18 G~~G~~la~~L~~~g~-v~vi-d~--~~~~~~~~~--~~-~~~i~g-d~-~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~ 88 (234)
T 2aef_A 18 SESTLECLRELRGSEV-FVLA-ED--ENVRKKVLR--SG-ANFVHG-DP-TRVSDLEKANVRGARAVIVDLESDSETIHC 88 (234)
T ss_dssp CHHHHHHHHHSTTSEE-EEEE-SC--GGGHHHHHH--TT-CEEEES-CT-TCHHHHHHTTCTTCSEEEECCSCHHHHHHH
T ss_pred ChHHHHHHHHHHhCCe-EEEE-EC--CHHHHHHHh--cC-CeEEEc-CC-CCHHHHHhcCcchhcEEEEcCCCcHHHHHH
Confidence 9999999999999998 7664 33 555554443 22 110001 00 111222 23789888775433 222
Q ss_pred hhhHhccc--ceEEEecCCcchHHHHHHHhccCCCcccccCcHHH
Q psy8846 426 KNNAHKIQ--AKIIAEAANESVQESLERRFGNVGGRIPVTPSESF 468 (568)
Q Consensus 426 ~~na~~i~--AkiIvE~AN~~~~~~l~~~l~~~GggI~vvPde~~ 468 (568)
...+.++. .++|+...|....+.|++. |-...+.|....
T Consensus 89 ~~~a~~~~~~~~iia~~~~~~~~~~l~~~----G~~~vi~p~~~~ 129 (234)
T 2aef_A 89 ILGIRKIDESVRIIAEAERYENIEQLRMA----GADQVISPFVIS 129 (234)
T ss_dssp HHHHHHHCSSSEEEEECSSGGGHHHHHHH----TCSEEECHHHHH
T ss_pred HHHHHHHCCCCeEEEEECCHhHHHHHHHC----CCCEEECHHHHH
Confidence 33444443 5899988776666666643 212344565444
No 349
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=23.67 E-value=56 Score=31.01 Aligned_cols=32 Identities=9% Similarity=0.002 Sum_probs=25.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYK 387 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~ 387 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..
T Consensus 17 ~gIG~~ia~~l~~~G~~V~~~---~r~~~~~~~~~ 48 (260)
T 2z1n_A 17 SGLGFASALELARNGARLLLF---SRNREKLEAAA 48 (260)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHH
T ss_pred chHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHH
Confidence 789999999999999999885 34666655543
No 350
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=23.66 E-value=56 Score=31.16 Aligned_cols=32 Identities=16% Similarity=-0.008 Sum_probs=25.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYK 387 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~ 387 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..
T Consensus 23 ~gIG~~ia~~l~~~G~~V~~~---~r~~~~~~~~~ 54 (267)
T 1iy8_A 23 SGLGRATAVRLAAEGAKLSLV---DVSSEGLEASK 54 (267)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHH
Confidence 789999999999999999884 35666655443
No 351
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=23.65 E-value=2.3e+02 Score=28.06 Aligned_cols=96 Identities=15% Similarity=0.126 Sum_probs=54.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecC-CCCcccccceEEeeccccCC--------
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYE-GENLMYEPCDIFVPAAVEKV-------- 423 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~-~~~ll~~~cDIliPaAl~~~-------- 423 (568)
|.+|..++..|.+.|++-|.|.+ -+.++..+..++.. ...++ -++ + ++||+|=|---+.
T Consensus 131 GGaaraia~~L~~~G~~~v~v~n--Rt~~ka~~La~~~~-------~~~~~~l~~-l--~~DivInaTp~Gm~~~~~~~p 198 (282)
T 3fbt_A 131 GGAARAVLQYLKDNFAKDIYVVT--RNPEKTSEIYGEFK-------VISYDELSN-L--KGDVIINCTPKGMYPKEGESP 198 (282)
T ss_dssp STTHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHCTTSE-------EEEHHHHTT-C--CCSEEEECSSTTSTTSTTCCS
T ss_pred cHHHHHHHHHHHHcCCCEEEEEe--CCHHHHHHHHHhcC-------cccHHHHHh-c--cCCEEEECCccCccCCCccCC
Confidence 89999999999999994444443 46666555543321 11111 112 3 8999996542221
Q ss_pred CChhhHhcccceEEEecCCcch-HHHHHHHhccCCCcccccCc
Q psy8846 424 ITKNNAHKIQAKIIAEAANESV-QESLERRFGNVGGRIPVTPS 465 (568)
Q Consensus 424 It~~na~~i~AkiIvE~AN~~~-~~~l~~~l~~~GggI~vvPd 465 (568)
|..+... +..+|++-..+|. ++.|.+. +++| ..+++-
T Consensus 199 i~~~~l~--~~~~v~DlvY~P~~T~ll~~A-~~~G--~~~~~G 236 (282)
T 3fbt_A 199 VDKEVVA--KFSSAVDLIYNPVETLFLKYA-RESG--VKAVNG 236 (282)
T ss_dssp SCHHHHT--TCSEEEESCCSSSSCHHHHHH-HHTT--CEEECS
T ss_pred CCHHHcC--CCCEEEEEeeCCCCCHHHHHH-HHCc--CeEeCc
Confidence 2332222 3578999998875 3444332 3443 455555
No 352
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=23.53 E-value=57 Score=30.91 Aligned_cols=31 Identities=10% Similarity=0.114 Sum_probs=24.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEY 386 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~ 386 (568)
|-+|+++|+.|++.|++|+.++ .+.+.+.+.
T Consensus 24 ~gIG~~ia~~l~~~G~~V~~~~---r~~~~~~~~ 54 (260)
T 2zat_A 24 DGIGLAIARRLAQDGAHVVVSS---RKQENVDRT 54 (260)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEEe---CCHHHHHHH
Confidence 7899999999999999998853 455555443
No 353
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=23.50 E-value=69 Score=30.36 Aligned_cols=32 Identities=9% Similarity=-0.127 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 354 PVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 354 nVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
-+|+++|+.|++.|++|+.+ +.+.+.+.+..+
T Consensus 34 GIG~~~a~~l~~~G~~V~~~---~r~~~~~~~~~~ 65 (266)
T 3o38_A 34 GIGSTTARRALLEGADVVIS---DYHERRLGETRD 65 (266)
T ss_dssp SHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHH
T ss_pred chHHHHHHHHHHCCCEEEEe---cCCHHHHHHHHH
Confidence 39999999999999999884 456666555443
No 354
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=23.46 E-value=60 Score=31.43 Aligned_cols=34 Identities=6% Similarity=-0.091 Sum_probs=27.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..++
T Consensus 31 ~gIG~aia~~La~~G~~V~~~---~r~~~~~~~~~~~ 64 (272)
T 2nwq_A 31 SGFGEACARRFAEAGWSLVLT---GRREERLQALAGE 64 (272)
T ss_dssp TSSHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEE---ECCHHHHHHHHHH
Confidence 789999999999999999884 4567776665443
No 355
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=23.28 E-value=32 Score=31.54 Aligned_cols=23 Identities=13% Similarity=-0.058 Sum_probs=21.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPT 375 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD 375 (568)
|.+|+++++.|.+.|++|++++-
T Consensus 10 G~iG~~l~~~L~~~g~~V~~~~R 32 (219)
T 3dqp_A 10 GRVGKSLLKSLSTTDYQIYAGAR 32 (219)
T ss_dssp SHHHHHHHHHHTTSSCEEEEEES
T ss_pred CHHHHHHHHHHHHCCCEEEEEEC
Confidence 89999999999999999999763
No 356
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=23.24 E-value=67 Score=31.05 Aligned_cols=33 Identities=9% Similarity=-0.003 Sum_probs=26.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..+
T Consensus 39 ~gIG~aia~~L~~~G~~V~~~---~r~~~~~~~~~~ 71 (276)
T 2b4q_A 39 RGIGQMIAQGLLEAGARVFIC---ARDAEACADTAT 71 (276)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---CSCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHH
Confidence 789999999999999998884 456666655544
No 357
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=23.15 E-value=1.1e+02 Score=29.89 Aligned_cols=21 Identities=5% Similarity=0.090 Sum_probs=18.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEe
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGL 373 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaV 373 (568)
+-.|..+|+.|++.||+|+.+
T Consensus 21 ~GIG~aia~~la~~Ga~Vv~~ 41 (242)
T 4b79_A 21 SGIGAAIAMQFAELGAEVVAL 41 (242)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEE
Confidence 568999999999999999874
No 358
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=22.97 E-value=59 Score=30.85 Aligned_cols=32 Identities=6% Similarity=-0.146 Sum_probs=25.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYK 387 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~ 387 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..
T Consensus 15 ~gIG~~ia~~l~~~G~~V~~~---~r~~~~~~~~~ 46 (260)
T 2qq5_A 15 RGIGRGIALQLCKAGATVYIT---GRHLDTLRVVA 46 (260)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHH
T ss_pred chHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHH
Confidence 679999999999999999874 34666655443
No 359
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=22.94 E-value=59 Score=30.84 Aligned_cols=31 Identities=6% Similarity=-0.007 Sum_probs=24.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEY 386 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~ 386 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+.
T Consensus 19 ~giG~~ia~~l~~~G~~V~~~---~r~~~~~~~~ 49 (260)
T 2ae2_A 19 RGIGYGIVEELASLGASVYTC---SRNQKELNDC 49 (260)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHH
Confidence 789999999999999999885 3456655543
No 360
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=22.70 E-value=71 Score=32.38 Aligned_cols=79 Identities=8% Similarity=0.091 Sum_probs=48.2
Q ss_pred cCHHH-HHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccc-cceEEeeccccCCCChhhHh
Q psy8846 353 GPVSM-YLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYE-PCDIFVPAAVEKVITKNNAH 430 (568)
Q Consensus 353 GnVG~-~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~-~cDIliPaAl~~~It~~na~ 430 (568)
|+.|. +.+..|...|+++++|+|. |.++..+..++.|...-|. +-+++++. ++|+++=| ..+..+.+.+.
T Consensus 35 G~~~~~~~~~~~~~~~~~lvav~d~--~~~~a~~~a~~~~~~~~~~-----~~~~ll~~~~vD~V~I~-tp~~~H~~~~~ 106 (361)
T 3u3x_A 35 NHNHIYGQVNCLLRAGARLAGFHEK--DDALAAEFSAVYADARRIA-----TAEEILEDENIGLIVSA-AVSSERAELAI 106 (361)
T ss_dssp CSTTHHHHHHHHHHTTCEEEEEECS--CHHHHHHHHHHSSSCCEES-----CHHHHHTCTTCCEEEEC-CCHHHHHHHHH
T ss_pred CHHHHHHHHHHhhcCCcEEEEEEcC--CHHHHHHHHHHcCCCcccC-----CHHHHhcCCCCCEEEEe-CChHHHHHHHH
Confidence 77774 4566777789999999976 7888777777764222221 23456653 58887754 34444444433
Q ss_pred cc---cceEEEe
Q psy8846 431 KI---QAKIIAE 439 (568)
Q Consensus 431 ~i---~AkiIvE 439 (568)
.. ..-++||
T Consensus 107 ~al~aGkhVl~E 118 (361)
T 3u3x_A 107 RAMQHGKDVLVD 118 (361)
T ss_dssp HHHHTTCEEEEE
T ss_pred HHHHCCCeEEEe
Confidence 22 2356666
No 361
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=22.67 E-value=50 Score=31.40 Aligned_cols=33 Identities=9% Similarity=0.013 Sum_probs=26.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..+
T Consensus 17 ~GIG~aia~~l~~~G~~V~~~---~r~~~~~~~~~~ 49 (250)
T 3nyw_A 17 QGIGAVIAAGLATDGYRVVLI---ARSKQNLEKVHD 49 (250)
T ss_dssp SHHHHHHHHHHHHHTCEEEEE---ESCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEE---ECCHHHHHHHHH
Confidence 689999999999999999885 456666655443
No 362
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=22.48 E-value=1.5e+02 Score=29.46 Aligned_cols=66 Identities=17% Similarity=-0.055 Sum_probs=39.1
Q ss_pred cCHHHHHHHHHHHCCC--eEeEeCCCCCCHHHHHHHHH--hcCCcccCCCCeec-CCCCcccccceEEeeccccCC
Q psy8846 353 GPVSMYLPQIWVQEKG--KCPGLPTHTRKPLALEEYKL--DNGTIVGFPGAVPY-EGENLMYEPCDIFVPAAVEKV 423 (568)
Q Consensus 353 GnVG~~~A~~L~~~Ga--kvvaVsD~GiD~~~L~~~~~--~~g~v~~~~ga~~i-~~~~ll~~~cDIliPaAl~~~ 423 (568)
|++|+.+|..|.+.|. .|+. .++|.+.+..... .++. .-.+..+.. ++.+.+ .+||+++-|+-...
T Consensus 9 G~~G~~la~~l~~~g~~~~V~l---~D~~~~~~~~~~~~l~~~~-~~~~~~~i~~~d~~~~-~~aDvViiav~~~~ 79 (319)
T 1a5z_A 9 GRVGSSTAFALLMKGFAREMVL---IDVDKKRAEGDALDLIHGT-PFTRRANIYAGDYADL-KGSDVVIVAAGVPQ 79 (319)
T ss_dssp SHHHHHHHHHHHHHTCCSEEEE---ECSSHHHHHHHHHHHHHHG-GGSCCCEEEECCGGGG-TTCSEEEECCCCCC
T ss_pred CHHHHHHHHHHHhCCCCCeEEE---EeCChHHHHHHHHHHHhhh-hhcCCcEEEeCCHHHh-CCCCEEEEccCCCC
Confidence 9999999999999987 7766 3567666655432 1111 001111111 211222 58999999887544
No 363
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=22.27 E-value=62 Score=30.93 Aligned_cols=33 Identities=18% Similarity=0.163 Sum_probs=26.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|-+|.++|+.|.+.|++|+.+ +.+.+.+.+..+
T Consensus 16 ~gIG~~ia~~l~~~G~~V~~~---~r~~~~~~~~~~ 48 (278)
T 1spx_A 16 NGIGRATAVLFAREGAKVTIT---GRHAERLEETRQ 48 (278)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHH
T ss_pred chHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHH
Confidence 789999999999999999885 346666655443
No 364
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=22.22 E-value=44 Score=32.12 Aligned_cols=23 Identities=17% Similarity=0.114 Sum_probs=21.2
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPT 375 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD 375 (568)
|.+|+++++.|.+.|++|++++-
T Consensus 17 G~iG~~l~~~L~~~g~~V~~~~r 39 (321)
T 3vps_A 17 GFIGGHLARALVASGEEVTVLDD 39 (321)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECC
T ss_pred ChHHHHHHHHHHHCCCEEEEEec
Confidence 89999999999999999999763
No 365
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=22.22 E-value=63 Score=30.59 Aligned_cols=32 Identities=3% Similarity=-0.128 Sum_probs=24.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYK 387 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~ 387 (568)
|.+|.++|+.|++.|++|+.+ +.+.+.+.+..
T Consensus 12 ~gIG~~ia~~l~~~G~~V~~~---~r~~~~~~~~~ 43 (256)
T 1geg_A 12 QGIGKAIALRLVKDGFAVAIA---DYNDATAKAVA 43 (256)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHH
T ss_pred ChHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHH
Confidence 679999999999999999884 34666555443
No 366
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=22.20 E-value=61 Score=31.80 Aligned_cols=33 Identities=9% Similarity=-0.019 Sum_probs=26.2
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..+
T Consensus 41 ~gIG~~la~~l~~~G~~V~~~---~r~~~~~~~~~~ 73 (301)
T 3tjr_A 41 SGIGLATATEFARRGARLVLS---DVDQPALEQAVN 73 (301)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEE---ECCHHHHHHHHH
Confidence 789999999999999999884 456666665443
No 367
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=22.13 E-value=2e+02 Score=29.53 Aligned_cols=87 Identities=15% Similarity=0.090 Sum_probs=52.3
Q ss_pred cCHHHHHHHHHHHC---CCeEeEeCCCCCCHHHHHHHHH---hcCC----cc---c----CCCCeec---C---CCCc-c
Q psy8846 353 GPVSMYLPQIWVQE---KGKCPGLPTHTRKPLALEEYKL---DNGT----IV---G----FPGAVPY---E---GENL-M 408 (568)
Q Consensus 353 GnVG~~~A~~L~~~---GakvvaVsD~GiD~~~L~~~~~---~~g~----v~---~----~~ga~~i---~---~~~l-l 408 (568)
|-+|..+.|.|.+. ...||+|.|. .|++.+....+ .+|. |. + +.| +.+ . ++++ |
T Consensus 10 G~IGr~llR~l~~~~~p~~eivaInd~-~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g-~~i~v~~~~dp~~i~w 87 (337)
T 1rm4_O 10 GRIGRNFLRCWHGRKDSPLDVVVINDT-GGVKQASHLLKYDSILGTFDADVKTAGDSAISVDG-KVIKVVSDRNPVNLPW 87 (337)
T ss_dssp SHHHHHHHHHHHTCSSCSEEEEEEECT-TCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETT-EEEEEECCSCGGGSCH
T ss_pred CHHHHHHHHHHHhCCCCCeEEEEEEcC-CCHHHHHHHhcccccCCCccceeEEecCCeEEECC-eEEEEEecCChhhCcc
Confidence 89999999999886 5799999996 58876655443 2222 11 1 111 111 1 1122 3
Q ss_pred -cccceEEeeccccCCCChhhHhcc---cceEEEecCC
Q psy8846 409 -YEPCDIFVPAAVEKVITKNNAHKI---QAKIIAEAAN 442 (568)
Q Consensus 409 -~~~cDIliPaAl~~~It~~na~~i---~AkiIvE~AN 442 (568)
+.+|||.+=| .+.-.+.+.++.. .||.|.=+|-
T Consensus 88 ~~~gvDiV~ea-tg~~~s~e~a~~~l~~Gak~V~iSap 124 (337)
T 1rm4_O 88 GDMGIDLVIEG-TGVFVDRDGAGKHLQAGAKKVLITAP 124 (337)
T ss_dssp HHHTCCEEEEC-SSSCCBHHHHHHHHHTTCSEEEESSC
T ss_pred cccCCCEEEEC-CCchhhHHHHHHHHHcCCEEEEECCc
Confidence 3478888876 5566677776654 3566665554
No 368
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=22.12 E-value=63 Score=30.76 Aligned_cols=32 Identities=19% Similarity=0.120 Sum_probs=25.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYK 387 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~ 387 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..
T Consensus 17 ~gIG~~ia~~l~~~G~~V~~~---~r~~~~~~~~~ 48 (262)
T 1zem_A 17 GNIGLATALRLAEEGTAIALL---DMNREALEKAE 48 (262)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHH
Confidence 789999999999999998874 35666665543
No 369
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=22.03 E-value=1e+02 Score=30.55 Aligned_cols=94 Identities=10% Similarity=0.140 Sum_probs=54.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCee------cCCCCcccccceEEeeccccCCCCh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVP------YEGENLMYEPCDIFVPAAVEKVITK 426 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~------i~~~~ll~~~cDIliPaAl~~~It~ 426 (568)
|++|..+|..|++.|..|+.+ .+.+.+....++ |.....++.+. .++.+.. .+||+++-|--...+ .
T Consensus 28 Ga~G~~~a~~L~~~G~~V~l~----~~~~~~~~i~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~~~D~vilavk~~~~-~ 100 (318)
T 3hwr_A 28 GAVGCYYGGMLARAGHEVILI----ARPQHVQAIEAT-GLRLETQSFDEQVKVSASSDPSAV-QGADLVLFCVKSTDT-Q 100 (318)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE----CCHHHHHHHHHH-CEEEECSSCEEEECCEEESCGGGG-TTCSEEEECCCGGGH-H
T ss_pred CHHHHHHHHHHHHCCCeEEEE----EcHhHHHHHHhC-CeEEEcCCCcEEEeeeeeCCHHHc-CCCCEEEEEcccccH-H
Confidence 999999999999999998885 255666555543 32222232221 1221222 479999887655432 4
Q ss_pred hhHhccc-----ceEEEecCCcch-HHHHHHHh
Q psy8846 427 NNAHKIQ-----AKIIAEAANESV-QESLERRF 453 (568)
Q Consensus 427 ~na~~i~-----AkiIvE~AN~~~-~~~l~~~l 453 (568)
+.+..|+ -.+|+-..|+-- .+.+.+.+
T Consensus 101 ~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~~~ 133 (318)
T 3hwr_A 101 SAALAMKPALAKSALVLSLQNGVENADTLRSLL 133 (318)
T ss_dssp HHHHHHTTTSCTTCEEEEECSSSSHHHHHHHHC
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCCcHHHHHHHc
Confidence 4444442 246777777532 23444443
No 370
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=21.89 E-value=45 Score=30.90 Aligned_cols=22 Identities=9% Similarity=0.182 Sum_probs=20.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|+++++.|++.|++|++++
T Consensus 11 g~iG~~l~~~L~~~g~~V~~~~ 32 (255)
T 2dkn_A 11 SGIGAALKELLARAGHTVIGID 32 (255)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred cHHHHHHHHHHHhCCCEEEEEe
Confidence 7899999999999999999875
No 371
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=21.89 E-value=61 Score=34.65 Aligned_cols=34 Identities=6% Similarity=-0.060 Sum_probs=28.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHh
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKLD 389 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~ 389 (568)
|.||..+|..|++.|.+|++ .++|.+.+..+.+.
T Consensus 17 G~vG~~lA~~la~~G~~V~~---~d~~~~~v~~l~~~ 50 (478)
T 2y0c_A 17 GSVGLVTGACLADIGHDVFC---LDVDQAKIDILNNG 50 (478)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---ECSCHHHHHHHHTT
T ss_pred CHHHHHHHHHHHhCCCEEEE---EECCHHHHHHHHCC
Confidence 99999999999999999988 46788877766543
No 372
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=21.83 E-value=41 Score=34.17 Aligned_cols=22 Identities=0% Similarity=-0.159 Sum_probs=20.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|-+|.++|+.|++.|++|+.++
T Consensus 55 ~GIG~aia~~La~~Ga~Vvl~~ 76 (346)
T 3kvo_A 55 RGIGKAIALKAAKDGANIVIAA 76 (346)
T ss_dssp SHHHHHHHHHHHTTTCEEEEEE
T ss_pred hHHHHHHHHHHHHCCCEEEEEE
Confidence 6899999999999999998865
No 373
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=21.71 E-value=48 Score=33.00 Aligned_cols=79 Identities=10% Similarity=0.042 Sum_probs=46.1
Q ss_pred cCHHH-HHHHHHHHCCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCccc-ccceEEeeccccCCCChhhHh
Q psy8846 353 GPVSM-YLPQIWVQEKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMY-EPCDIFVPAAVEKVITKNNAH 430 (568)
Q Consensus 353 GnVG~-~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~-~~cDIliPaAl~~~It~~na~ 430 (568)
|++|. ..+..|...|+++++|+|. |.++..++.++.+.+.-|. +.++++. .++|+++=|. .+..+.+.+.
T Consensus 13 G~~~~~~~~~~l~~~~~~lvav~d~--~~~~~~~~a~~~~~~~~~~-----~~~~ll~~~~~D~V~i~t-p~~~h~~~~~ 84 (336)
T 2p2s_A 13 AHNHIYDMCQQLIDAGAELAGVFES--DSDNRAKFTSLFPSVPFAA-----SAEQLITDASIDLIACAV-IPCDRAELAL 84 (336)
T ss_dssp SSTHHHHHHHHHHHTTCEEEEEECS--CTTSCHHHHHHSTTCCBCS-----CHHHHHTCTTCCEEEECS-CGGGHHHHHH
T ss_pred ChHHHHHhhhhhcCCCcEEEEEeCC--CHHHHHHHHHhcCCCcccC-----CHHHHhhCCCCCEEEEeC-ChhhHHHHHH
Confidence 77775 4666676789999999987 4445555555543222221 1245564 3688887663 4444444443
Q ss_pred c-ccc--eEEEe
Q psy8846 431 K-IQA--KIIAE 439 (568)
Q Consensus 431 ~-i~A--kiIvE 439 (568)
. +++ -++||
T Consensus 85 ~al~aGkhVl~E 96 (336)
T 2p2s_A 85 RTLDAGKDFFTA 96 (336)
T ss_dssp HHHHTTCEEEEC
T ss_pred HHHHCCCcEEEe
Confidence 2 332 36777
No 374
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=21.62 E-value=65 Score=30.94 Aligned_cols=32 Identities=9% Similarity=0.029 Sum_probs=25.2
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYK 387 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~ 387 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..
T Consensus 31 ~gIG~aia~~l~~~G~~V~~~---~r~~~~~~~~~ 62 (273)
T 1ae1_A 31 KGIGYAIVEELAGLGARVYTC---SRNEKELDECL 62 (273)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHH
T ss_pred chHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHH
Confidence 789999999999999999884 34666655443
No 375
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=21.60 E-value=65 Score=31.01 Aligned_cols=32 Identities=19% Similarity=0.167 Sum_probs=25.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYK 387 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~ 387 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..
T Consensus 16 ~gIG~~ia~~l~~~G~~V~~~---~r~~~~~~~~~ 47 (280)
T 1xkq_A 16 NGIGRTTAILFAQEGANVTIT---GRSSERLEETR 47 (280)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHH
T ss_pred ChHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHH
Confidence 789999999999999999885 34666665543
No 376
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=21.58 E-value=41 Score=33.65 Aligned_cols=21 Identities=5% Similarity=-0.057 Sum_probs=19.3
Q ss_pred cCHHHHHHHHHHHCCCeEeEe
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGL 373 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaV 373 (568)
|-+|.++|+.|++.|++|+.+
T Consensus 19 ~GIG~~~a~~La~~Ga~Vv~~ 39 (319)
T 1gz6_A 19 GGLGRAYALAFAERGALVVVN 39 (319)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHHHCCCEEEEE
Confidence 789999999999999999874
No 377
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=21.57 E-value=50 Score=31.82 Aligned_cols=22 Identities=14% Similarity=-0.037 Sum_probs=20.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|.+|+++++.|.+.|++|+++.
T Consensus 10 G~iG~~l~~~L~~~g~~V~~~~ 31 (312)
T 3ko8_A 10 GFIGSHLVDKLVELGYEVVVVD 31 (312)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEC
T ss_pred ChHHHHHHHHHHhCCCEEEEEe
Confidence 8899999999999999999875
No 378
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=21.47 E-value=53 Score=31.57 Aligned_cols=23 Identities=9% Similarity=-0.103 Sum_probs=20.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPT 375 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD 375 (568)
|.+|+++++.|.+.|.+|++++-
T Consensus 14 G~iG~~l~~~L~~~g~~V~~l~R 36 (308)
T 1qyc_A 14 GYIGRHVAKASLDLGHPTFLLVR 36 (308)
T ss_dssp STTHHHHHHHHHHTTCCEEEECC
T ss_pred cHHHHHHHHHHHhCCCCEEEEEC
Confidence 99999999999999999988653
No 379
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=21.46 E-value=50 Score=31.90 Aligned_cols=22 Identities=5% Similarity=0.009 Sum_probs=20.4
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|.+|+++++.|.+.|++|+++.
T Consensus 11 G~iG~~l~~~L~~~G~~V~~~~ 32 (322)
T 2p4h_X 11 GFLGSWIIKSLLENGYSVNTTI 32 (322)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEC
T ss_pred hHHHHHHHHHHHHCCCEEEEEE
Confidence 8999999999999999999865
No 380
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=21.38 E-value=54 Score=31.22 Aligned_cols=32 Identities=6% Similarity=-0.015 Sum_probs=25.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYK 387 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~ 387 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+..
T Consensus 22 ~gIG~~ia~~l~~~G~~V~~~---~r~~~~~~~~~ 53 (256)
T 3gaf_A 22 AGIGRAIAGTFAKAGASVVVT---DLKSEGAEAVA 53 (256)
T ss_dssp SHHHHHHHHHHHHHTCEEEEE---ESSHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHH
Confidence 789999999999999998874 45666555443
No 381
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=21.18 E-value=29 Score=35.51 Aligned_cols=86 Identities=17% Similarity=0.242 Sum_probs=50.2
Q ss_pred cCHHHHHHHHHHH-CCCeEeEeCCCCCCHHHHHHHHHhcC-Cccc-CCCCe--------ec--CCCCcccccceEEeecc
Q psy8846 353 GPVSMYLPQIWVQ-EKGKCPGLPTHTRKPLALEEYKLDNG-TIVG-FPGAV--------PY--EGENLMYEPCDIFVPAA 419 (568)
Q Consensus 353 GnVG~~~A~~L~~-~GakvvaVsD~GiD~~~L~~~~~~~g-~v~~-~~ga~--------~i--~~~~ll~~~cDIliPaA 419 (568)
|.+|..+++.|.+ .+.++++|.|...+ .......+.| ++.+ |++.. .+ +.++++ .+|||++=|
T Consensus 10 G~iG~~l~r~L~~~~~~elvav~d~~~~--~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~-~~vDvV~~a- 85 (337)
T 1cf2_P 10 GTVGKRVADAIAQQDDMKVIGVSKTRPD--FEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDML-DEADIVIDC- 85 (337)
T ss_dssp STTHHHHHHHHHTSSSEEEEEEEESSCS--HHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH-HTCSEEEEC-
T ss_pred CHHHHHHHHHHHcCCCcEEEEEEcCChh--HHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHh-cCCCEEEEC-
Confidence 9999999999988 58999999886433 2222222222 1111 11110 01 112233 378998887
Q ss_pred ccCCCChhhHhcc---cceEEEecCC
Q psy8846 420 VEKVITKNNAHKI---QAKIIAEAAN 442 (568)
Q Consensus 420 l~~~It~~na~~i---~AkiIvE~AN 442 (568)
++.-.+.+.++.. .+++|.+++-
T Consensus 86 tp~~~~~~~a~~~l~aG~~VId~sp~ 111 (337)
T 1cf2_P 86 TPEGIGAKNLKMYKEKGIKAIFQGGE 111 (337)
T ss_dssp CSTTHHHHHHHHHHHHTCCEEECTTS
T ss_pred CCchhhHHHHHHHHHcCCEEEEecCC
Confidence 4555666666644 3677777764
No 382
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=21.05 E-value=63 Score=31.16 Aligned_cols=31 Identities=6% Similarity=0.059 Sum_probs=24.5
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEY 386 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~ 386 (568)
|-+|.++|+.|++.|++|+.+ +.+.+.+.+.
T Consensus 37 ~GIG~aia~~l~~~G~~V~~~---~r~~~~~~~~ 67 (277)
T 4fc7_A 37 SGIGFRIAEIFMRHGCHTVIA---SRSLPRVLTA 67 (277)
T ss_dssp SHHHHHHHHHHHTTTCEEEEE---ESCHHHHHHH
T ss_pred chHHHHHHHHHHHCCCEEEEE---eCCHHHHHHH
Confidence 689999999999999999884 4455555443
No 383
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=20.90 E-value=2e+02 Score=29.24 Aligned_cols=83 Identities=19% Similarity=0.182 Sum_probs=49.8
Q ss_pred cCHHHHHHHHHHHC-CCeEeEeCCCCCCHHHHHHHHHhcCCccc-CCCCe------------e---cC---CCCc-c-cc
Q psy8846 353 GPVSMYLPQIWVQE-KGKCPGLPTHTRKPLALEEYKLDNGTIVG-FPGAV------------P---YE---GENL-M-YE 410 (568)
Q Consensus 353 GnVG~~~A~~L~~~-GakvvaVsD~GiD~~~L~~~~~~~g~v~~-~~ga~------------~---i~---~~~l-l-~~ 410 (568)
|.+|..+.|.|.+. ...||+|.|. .|...+ .|..+..++-+ |++.. . .. ++++ | ..
T Consensus 10 G~iG~~l~R~l~~~~~veiv~i~~~-~~~~~~-a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~i~w~~~ 87 (330)
T 1gad_O 10 GRIGRIVFRAAQKRSDIEIVAINDL-LDADYM-AYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPANLKWDEV 87 (330)
T ss_dssp SHHHHHHHHHHHTCSSEEEEEEECS-SCHHHH-HHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGGGCHHHH
T ss_pred CHHHHHHHHHHHcCCCeEEEEEcCC-CChhHH-hHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCChhhCccccc
Confidence 89999999999875 6899999985 355543 23333333322 33221 1 11 1222 2 25
Q ss_pred cceEEeeccccCCCChhhHhcc---cceEEE
Q psy8846 411 PCDIFVPAAVEKVITKNNAHKI---QAKIIA 438 (568)
Q Consensus 411 ~cDIliPaAl~~~It~~na~~i---~AkiIv 438 (568)
+|||++-| ++.-.+.+.++.. .||+|.
T Consensus 88 ~vDvVf~a-tg~~~s~e~a~~~l~~GakvVd 117 (330)
T 1gad_O 88 GVDVVAEA-TGLFLTDETARKHITAGAKKVV 117 (330)
T ss_dssp TCSEEEEC-SSSCCSHHHHTHHHHTTCSEEE
T ss_pred cCCEEEEC-CCccccHHHHHHHHHCCCEEEE
Confidence 79998877 6666777777655 355444
No 384
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=20.89 E-value=69 Score=30.69 Aligned_cols=31 Identities=26% Similarity=0.272 Sum_probs=24.8
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEY 386 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~ 386 (568)
|.+|+++|+.|.+.|++|++++ .+.+.+.+.
T Consensus 42 ggIG~~la~~l~~~G~~V~~~~---r~~~~~~~~ 72 (279)
T 1xg5_A 42 GGIGAAVARALVQQGLKVVGCA---RTVGNIEEL 72 (279)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHH
T ss_pred chHHHHHHHHHHHCCCEEEEEE---CChHHHHHH
Confidence 8899999999999999998853 455555444
No 385
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=20.79 E-value=70 Score=30.19 Aligned_cols=31 Identities=10% Similarity=0.027 Sum_probs=24.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEY 386 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~ 386 (568)
|-+|+++|+.|.+.|++|++++ .+.+.+.+.
T Consensus 24 ggiG~~la~~l~~~G~~V~~~~---r~~~~~~~~ 54 (266)
T 1xq1_A 24 KGIGHAIVEEFAGFGAVIHTCA---RNEYELNEC 54 (266)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEEe---CCHHHHHHH
Confidence 7899999999999999998854 455555543
No 386
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=20.77 E-value=67 Score=30.17 Aligned_cols=33 Identities=9% Similarity=-0.054 Sum_probs=25.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|-+|.++|+.|.+.|++|+.+ +.+.+.+.+..+
T Consensus 17 ggiG~~la~~l~~~G~~V~~~---~r~~~~~~~~~~ 49 (264)
T 2pd6_A 17 SGIGRAVSVRLAGEGATVAAC---DLDRAAAQETVR 49 (264)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESSHHHHHHHHH
T ss_pred ChHHHHHHHHHHHCCCEEEEE---eCChHHHHHHHH
Confidence 789999999999999999885 346666655443
No 387
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=20.54 E-value=51 Score=32.00 Aligned_cols=22 Identities=5% Similarity=-0.046 Sum_probs=20.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|.+|+++++.|.+.|++|++++
T Consensus 14 G~iG~~l~~~L~~~g~~V~~~~ 35 (321)
T 3c1o_A 14 GYIGKFMVRASLSFSHPTFIYA 35 (321)
T ss_dssp STTHHHHHHHHHHTTCCEEEEE
T ss_pred chhHHHHHHHHHhCCCcEEEEE
Confidence 9999999999999999998875
No 388
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=20.50 E-value=54 Score=31.89 Aligned_cols=23 Identities=17% Similarity=0.307 Sum_probs=20.9
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPT 375 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD 375 (568)
|.+|+++++.|.+.|++|+++.-
T Consensus 13 G~iG~~l~~~L~~~G~~V~~~~r 35 (345)
T 2z1m_A 13 GQDGAYLAKLLLEKGYEVYGADR 35 (345)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECS
T ss_pred ChHHHHHHHHHHHCCCEEEEEEC
Confidence 89999999999999999998753
No 389
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=20.47 E-value=97 Score=30.92 Aligned_cols=35 Identities=6% Similarity=-0.037 Sum_probs=27.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCC--CCCHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTH--TRKPLALEEYK 387 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~--GiD~~~L~~~~ 387 (568)
|-+|.++|+.|++.|++|++.+-. +.+.+.+.+..
T Consensus 15 ~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~ 51 (324)
T 3u9l_A 15 SGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIA 51 (324)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHH
Confidence 779999999999999999985432 56666665544
No 390
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=20.40 E-value=57 Score=31.40 Aligned_cols=23 Identities=9% Similarity=-0.115 Sum_probs=21.0
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPT 375 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD 375 (568)
|.+|+++++.|.+.|.+|++++-
T Consensus 14 G~iG~~l~~~L~~~g~~V~~~~R 36 (313)
T 1qyd_A 14 GYIGKRIVNASISLGHPTYVLFR 36 (313)
T ss_dssp STTHHHHHHHHHHTTCCEEEECC
T ss_pred cHHHHHHHHHHHhCCCcEEEEEC
Confidence 99999999999999999998763
No 391
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=20.36 E-value=50 Score=31.97 Aligned_cols=22 Identities=23% Similarity=0.291 Sum_probs=20.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|.+|+++++.|.+.|++|+++.
T Consensus 22 G~iG~~l~~~L~~~G~~V~~~~ 43 (321)
T 2pk3_A 22 GFVGKYLANHLTEQNVEVFGTS 43 (321)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred ChHHHHHHHHHHHCCCEEEEEe
Confidence 8999999999999999999875
No 392
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=20.35 E-value=49 Score=33.02 Aligned_cols=69 Identities=7% Similarity=-0.033 Sum_probs=43.1
Q ss_pred cCHHH-HHHHHHHH-CCCeEeEeCCCCCCHHHHHHHHHhcCCcccCCCCeecCCCCcccc-cceEEeeccccCCCChhhH
Q psy8846 353 GPVSM-YLPQIWVQ-EKGKCPGLPTHTRKPLALEEYKLDNGTIVGFPGAVPYEGENLMYE-PCDIFVPAAVEKVITKNNA 429 (568)
Q Consensus 353 GnVG~-~~A~~L~~-~GakvvaVsD~GiD~~~L~~~~~~~g~v~~~~ga~~i~~~~ll~~-~cDIliPaAl~~~It~~na 429 (568)
|++|. +.+..+.+ .+++|+||+|. |.++..+..++.|--.-|. +-+++|+. ++|+++=| ..+..+.+.+
T Consensus 32 G~ig~~~~~~~~~~~~~~~lvav~d~--~~~~a~~~a~~~g~~~~y~-----d~~ell~~~~iDaV~I~-tP~~~H~~~~ 103 (350)
T 4had_A 32 AKIGRDNVVPAIQDAENCVVTAIASR--DLTRAREMADRFSVPHAFG-----SYEEMLASDVIDAVYIP-LPTSQHIEWS 103 (350)
T ss_dssp CHHHHHTHHHHHHHCSSEEEEEEECS--SHHHHHHHHHHHTCSEEES-----SHHHHHHCSSCSEEEEC-SCGGGHHHHH
T ss_pred hHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHHHHcCCCeeeC-----CHHHHhcCCCCCEEEEe-CCCchhHHHH
Confidence 88986 56777776 48999999976 7888888877764211121 22455543 46776665 3444444443
No 393
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=20.27 E-value=82 Score=30.69 Aligned_cols=33 Identities=12% Similarity=-0.087 Sum_probs=27.1
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEYKL 388 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~~~ 388 (568)
|++|+.+|+.|++.|.+|+. .+.+.+.+.+..+
T Consensus 13 G~mG~~iA~~la~~G~~V~l---~d~~~~~~~~~~~ 45 (283)
T 4e12_A 13 GVLGSQIAFQTAFHGFAVTA---YDINTDALDAAKK 45 (283)
T ss_dssp SHHHHHHHHHHHHTTCEEEE---ECSSHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCeEEE---EeCCHHHHHHHHH
Confidence 99999999999999999887 4567777665544
No 394
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=20.26 E-value=46 Score=32.66 Aligned_cols=22 Identities=14% Similarity=0.133 Sum_probs=20.7
Q ss_pred cCHHHHHHHHHHHCCCeEeEeC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLP 374 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVs 374 (568)
|.+|+++++.|.+.|++|++++
T Consensus 29 G~iG~~l~~~L~~~G~~V~~~~ 50 (347)
T 4id9_A 29 GRVGRAVVAALRTQGRTVRGFD 50 (347)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEE
T ss_pred ChHHHHHHHHHHhCCCEEEEEe
Confidence 8999999999999999999975
No 395
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=20.23 E-value=73 Score=30.28 Aligned_cols=31 Identities=6% Similarity=-0.077 Sum_probs=24.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCCCCCHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTHTRKPLALEEY 386 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~GiD~~~L~~~ 386 (568)
|.+|.++|+.|.+.|++|+++ +.+.+.+.+.
T Consensus 17 ~gIG~~ia~~l~~~G~~V~~~---~r~~~~~~~~ 47 (267)
T 2gdz_A 17 QGIGRAFAEALLLKGAKVALV---DWNLEAGVQC 47 (267)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHH
T ss_pred CcHHHHHHHHHHHCCCEEEEE---ECCHHHHHHH
Confidence 789999999999999999884 3456655543
No 396
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=20.16 E-value=21 Score=33.44 Aligned_cols=32 Identities=9% Similarity=0.005 Sum_probs=24.4
Q ss_pred cCHHHHHHHHHHHCCC-------eEeEeCCCCCCHHHHHHHH
Q psy8846 353 GPVSMYLPQIWVQEKG-------KCPGLPTHTRKPLALEEYK 387 (568)
Q Consensus 353 GnVG~~~A~~L~~~Ga-------kvvaVsD~GiD~~~L~~~~ 387 (568)
|-+|.++|+.|.+.|+ +|+.++ .+.+.+.+..
T Consensus 12 ggiG~~la~~l~~~G~~~~~~~~~V~~~~---r~~~~~~~~~ 50 (244)
T 2bd0_A 12 KGIGRAIALEFARAARHHPDFEPVLVLSS---RTAADLEKIS 50 (244)
T ss_dssp SHHHHHHHHHHHHHTTTCTTCCEEEEEEE---SCHHHHHHHH
T ss_pred ChHHHHHHHHHHHhcCcccccceEEEEEe---CCHHHHHHHH
Confidence 7799999999999999 888743 4555555443
No 397
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=20.05 E-value=42 Score=32.00 Aligned_cols=24 Identities=13% Similarity=0.119 Sum_probs=21.6
Q ss_pred cCHHHHHHHHHHHCCCeEeEeCCC
Q psy8846 353 GPVSMYLPQIWVQEKGKCPGLPTH 376 (568)
Q Consensus 353 GnVG~~~A~~L~~~GakvvaVsD~ 376 (568)
|.+|+++++.|.+.|.+|++++-.
T Consensus 14 G~iG~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 14 GYTARVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CHHHHHHHHHHGGGTCEEEEEESC
T ss_pred cHHHHHHHHHHHHCCCEEEEEEcC
Confidence 899999999999999999997643
Done!