BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8848
(459 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|340788138|ref|YP_004753603.1| PmbA protein [Collimonas fungivorans Ter331]
gi|340553405|gb|AEK62780.1| PmbA protein [Collimonas fungivorans Ter331]
Length = 454
Score = 616 bits (1588), Expect = e-174, Method: Compositional matrix adjust.
Identities = 278/450 (61%), Positives = 355/450 (78%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S FI+S+ + QQLAQD+L YA++ GAS +++E +EG+G SV VRKG ++ IEQN DK M
Sbjct: 4 SVFIHSQEQLQQLAQDVLRYAREKGASGAAVEISEGSGLSVGVRKGSVETIEQNKDKGMG 63
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
V +Y+ + + GN+STSDF K+L DT+ AAYNIARFTA D+ AGLPD +TLEMNPLD
Sbjct: 64 VTVYLGEERHTRRGNASTSDFSAKALQDTVEAAYNIARFTAEDDCAGLPDVDTLEMNPLD 123
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
KL +PW +S ++A +A RCE AF + I N+E GV QQSHF+ ANS GFM GYP
Sbjct: 124 LKLCSPWLISAEEAVELAKRCEAAAFAVDKRITNSEGAGVYAQQSHFVSANSRGFMGGYP 183
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
FS+H IS++PIA KG MQRD+WYSS D K+L +PE IG YAA R ++RL A+++ TRK
Sbjct: 184 FSRHTISVAPIAGKGGNMQRDDWYSSMRDAKQLAKPEAIGRYAAGRALARLNARQLDTRK 243
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
CPVLFEAPLA LL F + +SG +LYRKSTFL+D+LGK +F+ HIQI+EDPH++G+ GS
Sbjct: 244 CPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLLDTLGKSVFAPHIQIVEDPHVIGAVGS 303
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
+ FD EGVKTQ+R VVK+G++QGYFLSTYSA+KLGMKTTGNSGG+H+L I S+ TKSSDN
Sbjct: 304 APFDEEGVKTQRRDVVKDGVVQGYFLSTYSARKLGMKTTGNSGGSHNLSITSSLTKSSDN 363
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
K MLKK++TGLLVTELMG G+NY+TGDYS+GA GYW+E G IQY VEEITI+G +++M
Sbjct: 364 FKAMLKKLDTGLLVTELMGQGVNYVTGDYSRGASGYWVEKGVIQYPVEEITIAGNMKDML 423
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
QIVAIG+D L R + +GS+LIE+M +AG
Sbjct: 424 AQIVAIGADTLIRGTKQTGSVLIESMTVAG 453
>gi|300311183|ref|YP_003775275.1| Zn-dependent protease [Herbaspirillum seropedicae SmR1]
gi|300073968|gb|ADJ63367.1| Zn-dependent protease protein [Herbaspirillum seropedicae SmR1]
Length = 454
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 267/450 (59%), Positives = 351/450 (78%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
+ F +S+ + +QLAQD+L YA+ GAS ++++ +EG+G SV VRKGKI+ IEQN DK +
Sbjct: 4 TPFTHSQDQLKQLAQDVLRYARDKGASDAAVDISEGSGLSVAVRKGKIETIEQNKDKGIG 63
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
V +++ +G+++ GN+STSDF +++L +T+ AAYNIARFT+ D+ AGLPD LEM P D
Sbjct: 64 VTVFLGEGRQVRRGNASTSDFSQQALKETVEAAYNIARFTSIDDCAGLPDAEMLEMAPRD 123
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
KL++PW +S ++A +A RCE A + I N+E GV Q SHF+ ANS GFM GYP
Sbjct: 124 LKLFSPWNISAEEAVALAQRCETAALETDPRISNSEGAGVYVQHSHFIAANSRGFMGGYP 183
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
FS+H IS++PIA KG MQRD+WYSS DPKKL QPE IG YAA+R ++RL A+K+STRK
Sbjct: 184 FSRHTISVAPIAGKGASMQRDDWYSSKRDPKKLAQPEAIGRYAAERALARLNARKLSTRK 243
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
CPVLFEAPLA LL F + +SG +LYRKSTFL+DSLG+++F HIQI+EDPH++G GS
Sbjct: 244 CPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLLDSLGQQVFPEHIQILEDPHVIGGVGS 303
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
+ FD EGV+T KR VV+NG++QGYFLSTYSA+KLGM+TTGNSGG+H+L + S T +D
Sbjct: 304 APFDEEGVRTLKREVVRNGVVQGYFLSTYSARKLGMQTTGNSGGSHNLTLRSELTTRADT 363
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
K MLKKM TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI+G +++M
Sbjct: 364 FKGMLKKMGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITIAGNMKDML 423
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+QIVA+G+D L R + +GSIL+E+M IAG
Sbjct: 424 RQIVAVGNDTLIRGTKETGSILLESMTIAG 453
>gi|409405681|ref|ZP_11254143.1| Zn-dependent protease [Herbaspirillum sp. GW103]
gi|386434230|gb|EIJ47055.1| Zn-dependent protease [Herbaspirillum sp. GW103]
Length = 454
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 265/450 (58%), Positives = 351/450 (78%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
+ F +S+ + +QLAQD+L YA+ GAS ++++ +EG+G SV VRKGKI+ IEQN DK +
Sbjct: 4 TPFTHSQDQLKQLAQDVLRYARDKGASDAAVDISEGSGLSVAVRKGKIETIEQNKDKGIG 63
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
V +++ +G+++ GN+STSDF +++L +T+ AAYNIARFTA D+ AGLPD LEM P D
Sbjct: 64 VTVFLGEGRQVRRGNASTSDFSQQALKETVEAAYNIARFTAIDDCAGLPDAEMLEMAPRD 123
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
KL++PW +S ++A +A RCE A + I +E GV Q SHF+ ANS GFM GYP
Sbjct: 124 LKLFSPWNISAEEAVALAQRCETAALETDPRITTSEGAGVYVQHSHFIAANSRGFMGGYP 183
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
FS+H IS++PIA KG MQRD+WYSS DPKKL QPE IG YAA+R ++RL A+K++TRK
Sbjct: 184 FSRHTISVAPIAGKGAGMQRDDWYSSKRDPKKLAQPEAIGRYAAERALARLNARKLTTRK 243
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
CPVLFEAPLA LL F + +SG +LYRKSTFL+DSLG+++F HIQI+EDPH++G GS
Sbjct: 244 CPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLLDSLGQQVFPEHIQILEDPHVVGGVGS 303
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
+ FD EGV+T KR V+K+G++QGYFLSTYSA+KLGM+TTGNSGG+H+L + S+ T +D
Sbjct: 304 APFDEEGVRTVKREVIKDGVVQGYFLSTYSARKLGMQTTGNSGGSHNLTLRSDLTTKADT 363
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
K MLKKM +GLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI+G +++M
Sbjct: 364 FKGMLKKMGSGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITIAGNMKDML 423
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+QIVA+G+D L R + +GSIL+ENM IAG
Sbjct: 424 RQIVAVGNDTLIRGTKETGSILLENMTIAG 453
>gi|134094233|ref|YP_001099308.1| hypothetical protein HEAR0999 [Herminiimonas arsenicoxydans]
gi|133738136|emb|CAL61181.1| Protein pmbA (Protein tldE) [Herminiimonas arsenicoxydans]
Length = 454
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 266/450 (59%), Positives = 352/450 (78%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S FI+S+ + +QLAQD+L YAK+ GAS++++E +EG+G SV VRKG ++ IEQN DK M
Sbjct: 4 SVFIHSQDQLKQLAQDVLRYAKEKGASNAAVEISEGSGLSVSVRKGGVETIEQNKDKGMG 63
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
V +Y+ + + + GN+STSDF +K+L DT+ AAYNIARFTA D+ AGLPDE+ LE NP D
Sbjct: 64 VTVYLGEERHIRRGNASTSDFSQKALKDTVEAAYNIARFTAEDDCAGLPDEDMLERNPRD 123
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
+L PW +S ++A +A R E AF + I N+E V QQSHF+ ANS GF+ GYP
Sbjct: 124 LQLCYPWLISTEEAVELAKRGEAAAFAVDKRITNSEGASVYAQQSHFVSANSRGFIGGYP 183
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
+S+H IS++PIA KG MQRD+WYSS DP +L PE IG YAA+R ++RL A+K+ TRK
Sbjct: 184 YSRHTISVAPIAGKGSNMQRDDWYSSMRDPARLAAPETIGRYAAQRALARLNARKLDTRK 243
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
CPVLFEAPLA LL F + +SG +LYRKSTFL+DSLGK F+SH+QI EDPH++G+ GS
Sbjct: 244 CPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLLDSLGKSAFASHVQITEDPHVIGAVGS 303
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
S FD EGVKT +R VVK+G++QGYFLSTYSA+KLGM+TTGN+GG+H+L + S+ T+ +D+
Sbjct: 304 SPFDEEGVKTSRREVVKDGVVQGYFLSTYSARKLGMQTTGNAGGSHNLTMTSSLTQPTDD 363
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
K MLKK++TGLLVTELMG G+NY+TGDYS+GA G+W+E G IQY VEEITI+G ++++F
Sbjct: 364 FKAMLKKLDTGLLVTELMGQGVNYVTGDYSRGASGFWVEKGVIQYPVEEITIAGNMKDIF 423
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
Q+VAIG+D L R + +GSILIENM++AG
Sbjct: 424 MQVVAIGADTLMRGTKNTGSILIENMVVAG 453
>gi|399019701|ref|ZP_10721847.1| putative Zn-dependent protease-like protein [Herbaspirillum sp.
CF444]
gi|398097592|gb|EJL87896.1| putative Zn-dependent protease-like protein [Herbaspirillum sp.
CF444]
Length = 454
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 265/448 (59%), Positives = 350/448 (78%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +S+ + +QLAQD+L YAK+ GAS ++++ +EG+G SV VRKGK++ IEQN DK + V
Sbjct: 6 FTHSQDQLKQLAQDVLRYAKEKGASDAAVDISEGSGLSVAVRKGKVETIEQNKDKGIGVT 65
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ +G+ + GN+STSDF +++L +T+ AAYNIARFTA D+ AGLPD LEM+P D K
Sbjct: 66 VYMGEGRNVRRGNASTSDFSQQALKETVEAAYNIARFTAIDDCAGLPDVENLEMHPRDLK 125
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
L TPW ++ ++A +A RCE A + + I N+E V QQSHF+ ANS GF+ GYPFS
Sbjct: 126 LCTPWLITAEEAVELAQRCEAAALSVDKRITNSEGASVYAQQSHFVAANSRGFVGGYPFS 185
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS++PIA KG MQRD+WYSS DPKKL +PE IG YAA+R ++RL A K+STRKCP
Sbjct: 186 RHTISVAPIAGKGGNMQRDDWYSSMRDPKKLAKPEAIGRYAAERALARLNACKLSTRKCP 245
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRKS+FL+DSLGK++F HIQI+EDPH++G GS+
Sbjct: 246 VLFEAPLAAGLLGAFVQAVSGGALYRKSSFLLDSLGKQVFPDHIQILEDPHVIGGVGSAP 305
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGVKT +R VVK+G++QGYFLSTYS +KLGM+TTGNSGG+H+L + S T ++D K
Sbjct: 306 FDEEGVKTHRREVVKDGVVQGYFLSTYSGRKLGMQTTGNSGGSHNLSLTSALTTAADTFK 365
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK++TGLLVTELMG G+NY+TGDYS+GA GYW+E G IQY VEEITI+G +++M +Q
Sbjct: 366 GMLKKLDTGLLVTELMGQGVNYVTGDYSRGASGYWVEKGVIQYPVEEITIAGNMKDMLRQ 425
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IVAIG+D L R + +GSIL+E+M IAG
Sbjct: 426 IVAIGNDTLIRGTKETGSILLESMTIAG 453
>gi|152980976|ref|YP_001352824.1| PmbA protein [Janthinobacterium sp. Marseille]
gi|151281053|gb|ABR89463.1| PmbA protein [Janthinobacterium sp. Marseille]
Length = 454
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 266/452 (58%), Positives = 352/452 (77%)
Query: 7 NRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
+ S FI+S+ + +QLAQD+L YAK+ GAS +++E NEG+G SV VRKG ++ IEQN DK
Sbjct: 2 SESVFIHSQDQLKQLAQDVLRYAKEKGASDAAVEINEGSGLSVSVRKGGVETIEQNKDKG 61
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
M V +Y+ + GN+STSDF +++L DT+ AAYNIARFTA D+ AGLP+ + LE+NP
Sbjct: 62 MGVTVYLGGDGHVRRGNASTSDFSQQALKDTVEAAYNIARFTAEDDCAGLPEVDMLELNP 121
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D +L PW +S ++A +A R E AF + I N+E + QQSHF+ ANS GF+ G
Sbjct: 122 RDLQLCYPWLISSEEAVELAKRGEAAAFAVDKRITNSEGASIYAQQSHFVSANSRGFIGG 181
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
YP+S+H IS++PIA KG MQRD+WYSS DPKKL +PE +G YAA+R ++RL A+KI T
Sbjct: 182 YPYSRHTISVAPIAGKGSNMQRDDWYSSMRDPKKLAKPEAVGQYAAQRALARLNARKIDT 241
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
RKCPVLFEAPLA LL F + +SG +LYRKSTFL+DSLGK F+ H+QI+EDPH++G
Sbjct: 242 RKCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLLDSLGKPAFAPHVQIVEDPHVIGGV 301
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
GSS FD EGVKT +R VVK+GI+QGYFLSTYSA+KLGM+TTGN+GG+H+L + S+ TKS+
Sbjct: 302 GSSPFDEEGVKTSRRDVVKDGIVQGYFLSTYSARKLGMQTTGNAGGSHNLSMTSSLTKST 361
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
D+ K MLKK++TGLLVTELMG G+NY+TGDYS+GA G+W+E G IQY VEEITI+G +++
Sbjct: 362 DDFKAMLKKLDTGLLVTELMGQGVNYVTGDYSRGASGFWVEKGVIQYPVEEITIAGNMKD 421
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+F Q+VAIG+D L R + +GS+LIENM++AG
Sbjct: 422 IFMQVVAIGADTLVRGTKQTGSVLIENMVVAG 453
>gi|398837370|ref|ZP_10594671.1| putative Zn-dependent protease-like protein [Herbaspirillum sp.
YR522]
gi|398208712|gb|EJM95421.1| putative Zn-dependent protease-like protein [Herbaspirillum sp.
YR522]
Length = 454
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 259/450 (57%), Positives = 345/450 (76%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S F +S+ + +QLAQD+L YA++ GAS ++++ +EG G SV VRKGKI+ IEQN DK +
Sbjct: 4 SVFTHSQDQLKQLAQDVLRYAREKGASDAAVDISEGGGLSVAVRKGKIETIEQNKDKGIG 63
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
V +++ +G+++ GN+STSDF +++L +T+ AAYNIARFTA D+ AGLPD + LEM P D
Sbjct: 64 VTVFLGEGRQVRRGNASTSDFSQQALRETVEAAYNIARFTAIDDCAGLPDADMLEMKPRD 123
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
KL++ W +S + A IA RCE A + ++ I N+E V Q SHF+ ANS GF+ GYP
Sbjct: 124 LKLFSAWDISTEQAVAIAQRCEQAALDTDARITNSEGASVYAQHSHFVAANSRGFVGGYP 183
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
FS+H IS++PIA +G MQRD+WYSS DP L +PE IG YAA+R ++RL A+K++TRK
Sbjct: 184 FSRHTISVAPIAGRGSNMQRDDWYSSKRDPALLAEPEAIGRYAAERALARLDARKLTTRK 243
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
C VLFEAPLA LL F + +SG +LYRKSTFL+DSLG ++F HIQI EDPH++G+ GS
Sbjct: 244 CAVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLLDSLGTQVFPGHIQINEDPHVVGAVGS 303
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
+ FD EGV+T KR VVK+G++QGYFLSTYSA+KLGM+TTGNSGG+H+L + S T +D
Sbjct: 304 APFDEEGVRTVKRQVVKDGVVQGYFLSTYSARKLGMQTTGNSGGSHNLALTSALTTKADT 363
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
ML KM TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI+G +++M
Sbjct: 364 FAGMLAKMGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITIAGNMKDML 423
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+QIVAIG+D L R + +GSIL+E+M +AG
Sbjct: 424 RQIVAIGNDTLVRGTKETGSILLESMTVAG 453
>gi|427400567|ref|ZP_18891805.1| hypothetical protein HMPREF9710_01401 [Massilia timonae CCUG 45783]
gi|425720392|gb|EKU83314.1| hypothetical protein HMPREF9710_01401 [Massilia timonae CCUG 45783]
Length = 450
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 257/452 (56%), Positives = 354/452 (78%), Gaps = 4/452 (0%)
Query: 7 NRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
N + F +++ + +QLA+D+L +A++ GA+ +S+E +EG+G SV VRKG I+ IEQN DK
Sbjct: 2 NDNAFTHTQDQLKQLARDVLAFAREQGATDASVEISEGSGLSVSVRKGNIETIEQNKDKG 61
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ V +Y+ G++ GN+STSDF SL T+ AA NIARFTA D+ AGLPD + LE+ P
Sbjct: 62 LGVTVYV--GQRR--GNASTSDFSTSSLKATVEAAANIARFTAEDDCAGLPDADLLELAP 117
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D +L+ PW +S ++A +A RCEN AF + I N+E V QQSHF+ ANS GF+ G
Sbjct: 118 RDLRLFYPWQISTEEAVELAKRCENAAFEVDKRITNSEGASVYVQQSHFVGANSRGFIGG 177
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
YPFS+H IS++PIA KG +MQRD+WY+S+ +PK+L +PE +G YAA+R ++RL A+K++T
Sbjct: 178 YPFSRHTISVAPIAGKGNQMQRDDWYTSSRNPKELAKPEKVGRYAAERALARLNARKLNT 237
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
R CPVLFEAPLA LL F + +SG +LYRKSTFL+D+LGK++F SHIQI+EDPH++G+
Sbjct: 238 RTCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLLDTLGKQVFPSHIQIVEDPHLIGAV 297
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
GS+ FD EGVKT +R V+ +G++QGYFLS+YSA+KLGM+TTGN+GG+H+L I+S T+ S
Sbjct: 298 GSAPFDEEGVKTVRRKVIADGVLQGYFLSSYSARKLGMQTTGNAGGSHNLEIVSRDTRRS 357
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
D+ + ML+K+ TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI+G ++
Sbjct: 358 DDFEGMLRKLGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITIAGNMRE 417
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
MF+QIVA+G+D L R + T+GSILIE M++AG
Sbjct: 418 MFQQIVAVGNDTLVRGNKTTGSILIEKMVVAG 449
>gi|395764031|ref|ZP_10444700.1| Zn-dependent protease [Janthinobacterium lividum PAMC 25724]
Length = 450
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 254/452 (56%), Positives = 342/452 (75%), Gaps = 4/452 (0%)
Query: 7 NRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
N S F +S+ + QQLA+D+L++A++ G + +++E +EG G SV VRKGKI+ IE+N DK
Sbjct: 2 NDSVFTHSQEQLQQLARDVLSFAREAGGTDAAVEVSEGGGLSVSVRKGKIETIEKNKDKG 61
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
M V +++ GKK GN+ST+DF +L T++AAYNIARFTA D+ AGL D + LEM+P
Sbjct: 62 MGVTVFV--GKKR--GNASTADFSPSALRATVDAAYNIARFTAEDDCAGLADADMLEMSP 117
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D +L+ PW +S ++A ++A R E AF + I N+E GV QQSHF+ ANS GFM G
Sbjct: 118 RDLQLFYPWMISAEEAVVLAKRAEAAAFAVDPRITNSEGAGVYVQQSHFVAANSRGFMGG 177
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
YPFS+H +S++PIA KG +MQRD+WYSS D K+ PE IG YAA+R +SRL A+K+ T
Sbjct: 178 YPFSRHTLSVAPIAGKGAKMQRDDWYSSVRDAAKMASPEAIGRYAAERALSRLNARKLGT 237
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
R CPVLFEAPLA LL + + SG +LYRKSTFL+D+LG ++ SH+QI EDPH++G
Sbjct: 238 RTCPVLFEAPLAAGLLGTYVQATSGGALYRKSTFLMDALGTQVLPSHVQIFEDPHVIGGV 297
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
GS+ FD EGVKT R VVK+G++QGYFLSTY+A+KLGM+TTGN+GG+H+L + S +T +S
Sbjct: 298 GSAPFDEEGVKTVSRDVVKDGVVQGYFLSTYTARKLGMQTTGNAGGSHNLYLTSTQTHAS 357
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
D+ MLKK+ TGLLVTELMG G NY+TGDYS+GA G+W+ENG IQY VEEITI+G ++
Sbjct: 358 DDFNAMLKKLGTGLLVTELMGQGTNYVTGDYSRGASGFWVENGVIQYPVEEITIAGNMKE 417
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
M + IVA+G+D L R + +GSILIE+M++AG
Sbjct: 418 MLRNIVAVGADALRRGTKETGSILIESMVVAG 449
>gi|445499345|ref|ZP_21466200.1| TldD/PmbA DNA gyrase modulator [Janthinobacterium sp. HH01]
gi|444789340|gb|ELX10888.1| TldD/PmbA DNA gyrase modulator [Janthinobacterium sp. HH01]
Length = 450
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 252/450 (56%), Positives = 335/450 (74%), Gaps = 4/450 (0%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
+ F +++ + +QLA+D+L +AK+ G + ++E +EG+G SV VRK KI+ IEQN DK M
Sbjct: 4 THFTHTQDQLKQLARDVLAFAKEQGGTDCAVEISEGSGLSVSVRKSKIETIEQNKDKGMG 63
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
V ++I G++ GN+STSDF +L T+ AAYNIARFT+ D+ AGL D + LE+ P D
Sbjct: 64 VTVFI--GQRR--GNASTSDFSPAALKATVEAAYNIARFTSDDDCAGLADADQLELAPRD 119
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
KL+ PW +S DA +A R E F + + N+E GV QQSHF+ ANS GF+ GYP
Sbjct: 120 LKLFYPWDISTADAVALAQRAEAAGFEVDPRVSNSEGAGVHVQQSHFVSANSRGFIGGYP 179
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
+S+H +S++ IA KG +MQRD+WY+S D K++ PE IG YAA+R ++RL A+ I TR
Sbjct: 180 YSRHTLSVAMIAGKGSKMQRDDWYTSVRDAKQMSSPEAIGRYAAERALARLNARTIDTRT 239
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
CPVLFEAPLA LL F + SG +LYRKS+FL+DSLGK++ HIQI EDPH++G GS
Sbjct: 240 CPVLFEAPLAAGLLGAFVQATSGGALYRKSSFLLDSLGKQVLPKHIQIKEDPHVVGGVGS 299
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
+ FD EGV+T KR VVK+G++QGYFLSTYSA+KLGMKTTGN+GG+H+L + S+ TK D+
Sbjct: 300 APFDEEGVRTVKRDVVKDGVVQGYFLSTYSARKLGMKTTGNAGGSHNLSLTSSLTKKGDD 359
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
ML+KM TGLLVTELMG G NY+TGDYS+GA GYW+ENG IQY VEEITI+G +++M
Sbjct: 360 FAAMLRKMGTGLLVTELMGQGTNYVTGDYSRGASGYWVENGVIQYPVEEITIAGNMKDML 419
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
QIVA+G+DVL R + +GSILIENM++AG
Sbjct: 420 AQIVAVGADVLVRGTKQTGSILIENMVVAG 449
>gi|386334072|ref|YP_006030243.1| peptidase, for maturation of microcin b17 and degradation of ccda
[Ralstonia solanacearum Po82]
gi|334196522|gb|AEG69707.1| peptidase, for maturation of microcin b17 and degradation of ccda
[Ralstonia solanacearum Po82]
Length = 457
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 251/454 (55%), Positives = 335/454 (73%), Gaps = 4/454 (0%)
Query: 6 KNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDK 65
K S F Y + + +++A+D+L A+++GA+ ++ E +EG G SV VRKG+I+ IEQN DK
Sbjct: 8 KTDSVFAYRREQLEEMARDVLRVARELGATDAATEISEGQGLSVTVRKGEIETIEQNRDK 67
Query: 66 NMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMN 125
+ V + + GKK GN+STSDF +L T+ AAYNIARFTA D+ AGL +E LE +
Sbjct: 68 VVGVTVML--GKKR--GNASTSDFSPAALRSTVEAAYNIARFTADDDCAGLAEEELLEQH 123
Query: 126 PLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMS 185
P D LY PW L + A IA E A + I N++ V+ Q SHF+LA S GF+
Sbjct: 124 PRDLSLYHPWTLDAEAAVEIARASEAAALAVSPKIRNSDGASVSAQHSHFVLATSRGFLG 183
Query: 186 GYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
GYP+S+H IS +PIA G+ MQRD+WYSS PK L PE IG YAA+R ++RL A++++
Sbjct: 184 GYPYSRHFISCAPIAGSGRHMQRDDWYSSKRSPKDLAAPEAIGQYAAERALARLSARRLT 243
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
TRKCPVLFEAPLA LL F + +SG +LYRKSTFL+D+LGK+IF+ H+QI EDPH+
Sbjct: 244 TRKCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLLDALGKEIFAPHVQIKEDPHVPSG 303
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
GS+ FD EGV+T++R VVK+G+++GYFLSTYSA+KLGM+TTGN+GG+H+L + S++T+
Sbjct: 304 MGSAPFDEEGVRTRRRDVVKDGVVEGYFLSTYSARKLGMQTTGNAGGSHNLTLFSDRTQP 363
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
D+ ML++M TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI+G L
Sbjct: 364 EDDFAGMLRRMGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITIAGSLP 423
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+MF+QIVAIG+D L R + +GSILIE M IAG+
Sbjct: 424 DMFRQIVAIGADALVRGTKETGSILIEQMTIAGE 457
>gi|329914234|ref|ZP_08276083.1| TldE/PmbA protein [Oxalobacteraceae bacterium IMCC9480]
gi|327545166|gb|EGF30445.1| TldE/PmbA protein [Oxalobacteraceae bacterium IMCC9480]
Length = 442
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 249/441 (56%), Positives = 330/441 (74%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
QQL QD+L YA++ GAS +S+E NEG G SV VRKG+++ IEQN DK ++V +Y+
Sbjct: 1 MQQLTQDVLRYARQRGASDASVEVNEGQGLSVTVRKGRVETIEQNKDKGVSVTLYLGSEG 60
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
M GN+ TSDF +++L T+ AA+NIARFTA DN AGLPD + E NP D +LY W +
Sbjct: 61 HMRSGNADTSDFSQQALKATVEAAWNIARFTAEDNCAGLPDPDQYEKNPPDLQLYHHWDI 120
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
A +A RCE AF + + N+E GV Q S F++ANS GFM GY FS+H +S+S
Sbjct: 121 DAAQAVALAQRCEAAAFAVDPRVTNSEGAGVYAQHSQFMMANSRGFMGGYAFSRHTLSVS 180
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
PIA +G MQRD+WYSS DP++L PE IG YAA+R ++RL+A+++STRKC VLFEAPL
Sbjct: 181 PIAGRGNGMQRDDWYSSQRDPQRLASPEAIGRYAAERALARLRARQLSTRKCAVLFEAPL 240
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A LL F + +SG +LYRKSTFL+DSLGK+ S HI+I EDP+++G+ GS+ FD+EG +
Sbjct: 241 AVGLLGTFVQAVSGGALYRKSTFLLDSLGKQALSDHIRIAEDPYVIGAVGSAPFDDEGCR 300
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T R VV +G++QGYFLSTYSA+KLGM TGN+GG+H+L + S++TK +D+ K ML+++
Sbjct: 301 TVARDVVVDGVVQGYFLSTYSARKLGMAGTGNAGGSHNLTMSSSRTKPADDFKAMLRQLG 360
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGLLVTELMG+G NY+TGDYS+GA G+W+E G IQY VEEITI+G +Q MFKQIVAIG+D
Sbjct: 361 TGLLVTELMGEGTNYVTGDYSRGASGFWVEGGVIQYPVEEITIAGNMQTMFKQIVAIGAD 420
Query: 438 VLTRNSNTSGSILIENMIIAG 458
R + +GS+LIE+M IAG
Sbjct: 421 THLRGTKQTGSVLIESMTIAG 441
>gi|187927911|ref|YP_001898398.1| peptidase U62 modulator of DNA gyrase [Ralstonia pickettii 12J]
gi|187724801|gb|ACD25966.1| peptidase U62 modulator of DNA gyrase [Ralstonia pickettii 12J]
Length = 457
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 255/461 (55%), Positives = 340/461 (73%), Gaps = 6/461 (1%)
Query: 1 MEQLIKNRSK--FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDV 58
M Q + +++ F Y + + +++A D+L A+++GAS ++ E +EG G SV VRKG+I+
Sbjct: 1 MSQTLDSKTAPVFAYRREQLEEMASDVLRIARELGASDAATEISEGQGLSVTVRKGEIET 60
Query: 59 IEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPD 118
IEQN DK + V + + GKK GN+STSDF +L T+ AAYNIARFTA D+ AGL +
Sbjct: 61 IEQNRDKIVGVTVML--GKKR--GNASTSDFSPAALRSTVEAAYNIARFTADDDCAGLAE 116
Query: 119 ENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLA 178
E LE +P D +LY PW + + A IA E AF + I N++ + ++ Q SHF+LA
Sbjct: 117 EELLEKHPRDLQLYHPWMIDAEAAVEIARAAEAAAFAVSPKIRNSDGSSISAQHSHFVLA 176
Query: 179 NSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISR 238
S GFM+GYP+S+H IS +PIA G MQRD+WYSS P L PE IG YAA+R ++R
Sbjct: 177 TSRGFMAGYPYSRHFISAAPIAGSGAHMQRDDWYSSKRSPDDLAAPEAIGKYAAERALAR 236
Query: 239 LKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIE 298
L A++++TRKCPVLFEAPLA LL F + +SG +LYRKSTFL+D+LGK++F+ H+QI E
Sbjct: 237 LSARRLTTRKCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLLDTLGKEVFAPHVQIKE 296
Query: 299 DPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLII 358
DPH+L GS+ FD EGV+TQ+R VVKNG+++GYFLSTYSA+KLGM+TTGN+GG+H+L +
Sbjct: 297 DPHVLNGMGSAPFDEEGVRTQRRDVVKNGVVEGYFLSTYSARKLGMQTTGNAGGSHNLTL 356
Query: 359 ISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEI 418
SNKT + D+ ML++M TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEI
Sbjct: 357 FSNKTTAEDDFAGMLRRMGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEI 416
Query: 419 TISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
TI+G L MF+QIVAIG+D L R + +GSILIE M IAG+
Sbjct: 417 TIAGNLGEMFRQIVAIGADALVRGTKETGSILIEQMTIAGE 457
>gi|83745790|ref|ZP_00942847.1| PmbA protein [Ralstonia solanacearum UW551]
gi|83727480|gb|EAP74601.1| PmbA protein [Ralstonia solanacearum UW551]
Length = 457
Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust.
Identities = 252/454 (55%), Positives = 335/454 (73%), Gaps = 4/454 (0%)
Query: 6 KNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDK 65
K S F Y + + +++A+D+L A+++GA+ ++ E +EG G SV VRKG+I+ IEQN DK
Sbjct: 8 KTDSVFAYRREQLEEMARDVLRVARELGATDAATEISEGQGLSVTVRKGEIETIEQNRDK 67
Query: 66 NMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMN 125
+ V + + GKK GN+STSDF +L T+ AAYNIARFTA D+ AGL +E LE +
Sbjct: 68 VVGVTVML--GKKR--GNASTSDFSPAALRSTVEAAYNIARFTADDDCAGLAEEELLEQH 123
Query: 126 PLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMS 185
P D LY PW L + A IA E A + I N++ V+ Q SHF+LA S GF+
Sbjct: 124 PRDLSLYHPWTLDAEAAVEIARAAEAAALGVSPKIRNSDGASVSAQHSHFVLATSRGFLG 183
Query: 186 GYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
GYP+S+H IS +PIA G+ MQRD+WYSS PK L PE IG YAA+R ++RL A++++
Sbjct: 184 GYPYSRHFISCAPIAGSGRHMQRDDWYSSKRSPKDLAAPEAIGQYAAERALARLSARRLT 243
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
TRKCPVLFEAPLA LL F + +SG +LYRKSTFL+D+LGK+IF+ H+QI EDPH+
Sbjct: 244 TRKCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLLDALGKEIFAPHVQIKEDPHVPSG 303
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
GS+ FD EGV+T++R VVK+G+++GYFLSTYSA+KLGM+TTGN+GG+H+L + S+KT+
Sbjct: 304 MGSAPFDEEGVRTRRRDVVKDGVVEGYFLSTYSARKLGMQTTGNAGGSHNLTLFSDKTQP 363
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
D+ ML++M TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI+G L
Sbjct: 364 EDDFAGMLRRMGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITIAGSLP 423
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+MF+QIVAIG+D L R + +GSILIE M IAG+
Sbjct: 424 DMFRQIVAIGADALVRGTKETGSILIEQMTIAGE 457
>gi|309781082|ref|ZP_07675820.1| PmbA protein [Ralstonia sp. 5_7_47FAA]
gi|404394005|ref|ZP_10985809.1| hypothetical protein HMPREF0989_02669 [Ralstonia sp. 5_2_56FAA]
gi|308920148|gb|EFP65807.1| PmbA protein [Ralstonia sp. 5_7_47FAA]
gi|348614309|gb|EGY63861.1| hypothetical protein HMPREF0989_02669 [Ralstonia sp. 5_2_56FAA]
Length = 457
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 252/461 (54%), Positives = 340/461 (73%), Gaps = 6/461 (1%)
Query: 1 MEQLIKNRSK--FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDV 58
M Q + +++ F Y + + +++A D+L A+++GAS ++ E +EG G SV VRKG+++
Sbjct: 1 MSQTLDSKTAPVFAYRREQLEEMATDVLRIARELGASDAATEISEGQGLSVTVRKGEVET 60
Query: 59 IEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPD 118
IEQN DK + V + + GKK GN+STSDF +L T+ AAYNIARFTA D+ AGL +
Sbjct: 61 IEQNRDKVVGVTVML--GKKR--GNASTSDFSPAALRSTVEAAYNIARFTADDDCAGLAE 116
Query: 119 ENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLA 178
E LE +P D +LY PW + + A IA E AF + I N++ + ++ Q SHF+LA
Sbjct: 117 EELLEKHPQDLQLYHPWMIDAEAAVEIARAAEAAAFAVSPKIRNSDGSSISAQHSHFVLA 176
Query: 179 NSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISR 238
S GFM GYP+S+H IS +PIA G MQRD+WYSS P L PE IG YAA+R ++R
Sbjct: 177 TSRGFMGGYPYSRHFISAAPIAGSGAHMQRDDWYSSKRSPDDLAAPEAIGKYAAERALAR 236
Query: 239 LKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIE 298
L A++++TRKCPVLFEAPLA LL F + +SG +LYRKSTFL+D+LGK++F+ H+QI E
Sbjct: 237 LGARRLTTRKCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLLDTLGKEVFAPHVQITE 296
Query: 299 DPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLII 358
DPH+L GS+ FD EGV+TQ+R VVKNG+++GYFLSTYSA+KLGM+TTGN+GG+H+L +
Sbjct: 297 DPHVLNGMGSAPFDEEGVRTQRRDVVKNGVVEGYFLSTYSARKLGMQTTGNAGGSHNLTL 356
Query: 359 ISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEI 418
S+KT + D+ ML++M TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEI
Sbjct: 357 FSDKTTAEDDFAGMLRRMGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEI 416
Query: 419 TISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
TI+G L+ MF+QIVAIG+D L R + +GSIL+E M IAG+
Sbjct: 417 TIAGNLREMFRQIVAIGADALVRGTKETGSILVEQMTIAGE 457
>gi|421888864|ref|ZP_16319940.1| peptidase, for maturation of Microcin B17 and degradation of CcdA
[Ralstonia solanacearum K60-1]
gi|378965806|emb|CCF96688.1| peptidase, for maturation of Microcin B17 and degradation of CcdA
[Ralstonia solanacearum K60-1]
Length = 457
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 252/454 (55%), Positives = 334/454 (73%), Gaps = 4/454 (0%)
Query: 6 KNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDK 65
K S F Y + + +++A+D+L A+++GA+ ++ E +EG G SV VRKG+I+ IEQN DK
Sbjct: 8 KTDSVFAYRREQLEEMARDVLRVARELGATDAATEISEGQGLSVTVRKGEIETIEQNRDK 67
Query: 66 NMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMN 125
+ V + + GKK GN+STSDF +L T+ AAYNIARFTA D+ AGL +E LE +
Sbjct: 68 VVGVTVML--GKKR--GNASTSDFSPAALRSTVEAAYNIARFTADDDCAGLAEEELLEQH 123
Query: 126 PLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMS 185
P D LY PW L A IA E A + I N++ V+ Q SHF+LA S GF+
Sbjct: 124 PRDLSLYHPWTLDAKAAVEIARAAEAAALAVSPKIRNSDGASVSAQHSHFVLATSRGFLG 183
Query: 186 GYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
GYP+S+H IS +PIA G+ MQRD+WYSS PK L PE IG YAA+R ++RL A++++
Sbjct: 184 GYPYSRHFISCAPIAGSGRHMQRDDWYSSKRSPKDLAAPEAIGQYAAERALARLSARRLT 243
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
TRKCPVLFEAPLA LL F + +SG +LYRKSTFL+D+LGK+IF+ H+QI EDPH+
Sbjct: 244 TRKCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLLDALGKEIFAPHVQIKEDPHVPSG 303
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
GS+ FD EGV+T++R VVK+G+++GYFLSTYSA+KLGM+TTGN+GG+H+L + S+KT+
Sbjct: 304 MGSAPFDEEGVRTRRRDVVKDGVVEGYFLSTYSARKLGMQTTGNAGGSHNLTLFSDKTQP 363
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
D+ ML++M TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI+G L
Sbjct: 364 EDDFAGMLRRMGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITIAGSLP 423
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+MF+QIVAIG+D L R + +GSILIE M IAG+
Sbjct: 424 DMFRQIVAIGADALVRGTKETGSILIEQMTIAGE 457
>gi|300704708|ref|YP_003746311.1| peptidase, for maturation of microcin b17 and degradation of ccda
[Ralstonia solanacearum CFBP2957]
gi|299072372|emb|CBJ43710.1| peptidase, for maturation of Microcin B17 and degradation of CcdA
[Ralstonia solanacearum CFBP2957]
Length = 457
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 252/454 (55%), Positives = 335/454 (73%), Gaps = 4/454 (0%)
Query: 6 KNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDK 65
K S F Y + + +++A+D+L A+++GA+ ++ E +EG G SV VRKG+I+ IEQN DK
Sbjct: 8 KTDSVFAYRREQLEEMARDVLRVARELGATDAATEISEGQGLSVTVRKGEIETIEQNRDK 67
Query: 66 NMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMN 125
+ V + + GKK GN+STSDF +L T+ AAYNIARFTA D+ AGL +E LE +
Sbjct: 68 VVGVTVML--GKKR--GNASTSDFSPAALRSTVEAAYNIARFTADDDCAGLAEEELLEQH 123
Query: 126 PLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMS 185
P D LY PW L + A IA E A + I N++ V+ Q SHF+LA S GF+
Sbjct: 124 PRDLSLYHPWTLDAEAAVEIARAAEAAALAVSPKIRNSDGASVSAQHSHFVLATSRGFLG 183
Query: 186 GYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
GYP+S+H IS +PIA G+ MQRD+WYSS PK L PE IG YAA+R ++RL A++++
Sbjct: 184 GYPYSRHFISCAPIAGSGRHMQRDDWYSSKRSPKDLAAPEAIGQYAAERALARLSARRLT 243
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
TRKCPVLFEAPLA LL F + +SG +LYRKSTFL+D+LGK+IF+ H+QI EDPH+
Sbjct: 244 TRKCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLLDALGKEIFAPHVQIKEDPHVPSG 303
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
GS+ FD EGV+T++R VVK+G+++GYFLSTYSA+KLGM+TTGN+GG+H+L + S+KT+
Sbjct: 304 MGSAPFDEEGVRTRRRDVVKDGVVEGYFLSTYSARKLGMQTTGNAGGSHNLTLFSDKTQP 363
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
D+ ML++M TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI+G L
Sbjct: 364 EDDFAGMLRRMGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITIAGSLP 423
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+MF+QIVAIG+D L R + +GSILIE M IAG+
Sbjct: 424 DMFRQIVAIGADALVRGTKETGSILIEQMTIAGE 457
>gi|299066915|emb|CBJ38110.1| peptidase, for maturation of Microcin B17 and degradation of CcdA
[Ralstonia solanacearum CMR15]
Length = 457
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 254/454 (55%), Positives = 334/454 (73%), Gaps = 4/454 (0%)
Query: 6 KNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDK 65
K S F Y + +++A+D+L A+++GA+ ++ E +EG G SV VRKG+I+ IEQN DK
Sbjct: 8 KTDSVFAYRRERLEEMARDVLRIARELGATDAATEISEGQGLSVTVRKGEIETIEQNRDK 67
Query: 66 NMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMN 125
+ V + + GKK GN+STSDF +L T+ AAYNIARFTA D+ AGL +E LE
Sbjct: 68 VVGVTVML--GKKR--GNASTSDFSSAALRSTVEAAYNIARFTADDDCAGLAEEELLERQ 123
Query: 126 PLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMS 185
P D LY PW L + A IA E AF I N++ V+ Q SHF+LA S GF+
Sbjct: 124 PRDLSLYHPWTLDAEAAVEIARAAEAAAFAVGPKIRNSDGASVSAQHSHFVLATSRGFLG 183
Query: 186 GYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
GYP+S+H IS +PIA G++MQRD+WYSS PK L PE IG YAA+R ++RL A+++S
Sbjct: 184 GYPYSRHFISCAPIAGSGQQMQRDDWYSSKRSPKDLAAPEAIGQYAAERALARLSARRLS 243
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
TRKCPVLFEAPLA LL F + +SG +LYRKSTFL+DSLGK IF+ H+QI EDPH+
Sbjct: 244 TRKCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLLDSLGKAIFAPHVQIKEDPHVPSG 303
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
GS+ FD EGV+TQ+R VV++G+++GYFLSTYSA+KLGM+TTGN+GG+H+L + S++T+
Sbjct: 304 MGSAPFDEEGVRTQRRDVVRDGVVEGYFLSTYSARKLGMQTTGNAGGSHNLTLFSDQTQP 363
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
D+ ML++M TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI+G L+
Sbjct: 364 GDDFAGMLRRMGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITIAGNLR 423
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+MF+QIVAIG+D L R + +GSILIE M IAG+
Sbjct: 424 DMFRQIVAIGADALIRGTKETGSILIEQMTIAGE 457
>gi|241662500|ref|YP_002980860.1| peptidase U62 modulator of DNA gyrase [Ralstonia pickettii 12D]
gi|240864527|gb|ACS62188.1| peptidase U62 modulator of DNA gyrase [Ralstonia pickettii 12D]
Length = 457
Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust.
Identities = 252/461 (54%), Positives = 338/461 (73%), Gaps = 6/461 (1%)
Query: 1 MEQLIKNRSK--FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDV 58
M Q + +++ F Y + + +++A D+L A+++GAS ++ E +EG G SV VRKG+++
Sbjct: 1 MSQTLDSKTAPVFAYRREQLEEMATDVLRIARELGASDAATEISEGQGLSVTVRKGEVET 60
Query: 59 IEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPD 118
IEQN DK + V + + GKK GN+STSDF +L T+ AAYNIARFTA D+ AGL +
Sbjct: 61 IEQNRDKVVGVTVML--GKKR--GNASTSDFSPAALRSTVEAAYNIARFTADDDCAGLAE 116
Query: 119 ENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLA 178
E LE +P D +LY PW + + A IA E AF + I N++ + ++ Q SHF+LA
Sbjct: 117 EELLEKHPQDLQLYHPWMIDAEAAVEIARAAEAAAFAVSPKIRNSDGSSISAQHSHFVLA 176
Query: 179 NSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISR 238
S GFM GYP+S+H IS +PIA G MQRD+WYSS P L PE IG YAA+R ++R
Sbjct: 177 TSRGFMGGYPYSRHFISAAPIAGSGAHMQRDDWYSSKRSPDDLAAPEAIGKYAAERALAR 236
Query: 239 LKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIE 298
L A++++TRKCPVLFEAPLA LL F + +SG +LYRKSTFL+D+LGK +F+ H+QI E
Sbjct: 237 LGARRLTTRKCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLLDTLGKVVFAPHVQITE 296
Query: 299 DPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLII 358
DPH+L GS+ FD EGV+TQ+R VVKNG+++GYFLSTYSA+KLGM+TTGN+GG+H+L +
Sbjct: 297 DPHVLNGMGSAPFDEEGVRTQRRDVVKNGVVEGYFLSTYSARKLGMQTTGNAGGSHNLTL 356
Query: 359 ISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEI 418
S+KT + D+ ML++M TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEI
Sbjct: 357 FSDKTTAEDDFAGMLRRMGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEI 416
Query: 419 TISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
TI+G L+ MF+QIV IG+D L R + +GSILIE M IAG+
Sbjct: 417 TIAGNLREMFRQIVVIGADALVRGTKETGSILIEQMTIAGE 457
>gi|300692076|ref|YP_003753071.1| peptidase, for maturation of Microcin B17 and degradation of CcdA
[Ralstonia solanacearum PSI07]
gi|299079136|emb|CBJ51804.1| peptidase, for maturation of Microcin B17 and degradation of CcdA
[Ralstonia solanacearum PSI07]
gi|344170697|emb|CCA83123.1| peptidase, for maturation of Microcin B17 and degradation of CcdA
[blood disease bacterium R229]
Length = 457
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 250/454 (55%), Positives = 336/454 (74%), Gaps = 4/454 (0%)
Query: 6 KNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDK 65
K S F Y + + ++A+D+L A+++GA+ ++ E +EG G SV VRKG+I+ IEQN DK
Sbjct: 8 KTDSVFAYRREQLAEMARDVLRIARELGATDAATEISEGQGLSVSVRKGEIETIEQNRDK 67
Query: 66 NMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMN 125
+ V + + GKK GN+STSDF +L T+ AAYNIARFTA D+ AGL ++ LE +
Sbjct: 68 VVGVTVML--GKKR--GNASTSDFAPAALRSTVEAAYNIARFTADDDCAGLAEDELLERH 123
Query: 126 PLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMS 185
P D LY PW + + A IA E AF + I N++ V+ Q SHF+LA + GF+
Sbjct: 124 PRDLSLYHPWTIDAEAAVEIARAAEAAAFAVSPKIRNSDGASVSAQHSHFVLATTRGFLG 183
Query: 186 GYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
GYP+S+H IS +PIA G+ MQRD+WYSS PK L P+ IG YAA+R ++RL A++++
Sbjct: 184 GYPYSRHFISCAPIAGSGRHMQRDDWYSSKRSPKDLAAPQAIGQYAAERALARLSARRLT 243
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
TRKCPVLFEAPLA LL F + +SG +LYRKSTFL+DSLGK+IF+ H+QI EDPH+
Sbjct: 244 TRKCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLLDSLGKEIFAPHVQIKEDPHVPSG 303
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
GS+ FD EGV+TQ+R VVK+G+++GYFLSTYSA+KLGM+TTGN+GG+H+L + S++T+
Sbjct: 304 MGSAPFDEEGVRTQRRDVVKDGVVEGYFLSTYSARKLGMQTTGNAGGSHNLTLFSDRTQP 363
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
D+ ML++M TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI+G L+
Sbjct: 364 GDDFAGMLRRMGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITIAGNLR 423
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+MF+QIVAIG+D L R + +GSILIE M IAG+
Sbjct: 424 DMFRQIVAIGADALVRGTKETGSILIEQMTIAGE 457
>gi|344174078|emb|CCA85859.1| peptidase, for maturation of Microcin B17 and degradation of CcdA
[Ralstonia syzygii R24]
Length = 457
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 249/454 (54%), Positives = 336/454 (74%), Gaps = 4/454 (0%)
Query: 6 KNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDK 65
K S F Y + + ++A+D+L A+++GA+ ++ E +EG G SV VRKG+I+ IEQN DK
Sbjct: 8 KTDSVFAYRREQLAEMARDVLRIARELGATDAATEISEGQGLSVSVRKGEIETIEQNRDK 67
Query: 66 NMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMN 125
+ V + + GKK GN+STSDF +L T+ AAYNIARFTA D+ AGL ++ LE +
Sbjct: 68 VVGVTVML--GKKR--GNASTSDFAPAALRSTVEAAYNIARFTADDDCAGLAEDELLERH 123
Query: 126 PLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMS 185
P + LY PW + + A IA E AF + I N++ V+ Q SHF+LA + GF+
Sbjct: 124 PRNLSLYHPWTIDAEAAVEIARAAEAAAFAVSPKIRNSDGASVSAQHSHFVLATTRGFLG 183
Query: 186 GYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
GYP+S+H IS +PIA G+ MQRD+WYSS P+ L PE IG YAA+R ++RL A++++
Sbjct: 184 GYPYSRHFISCAPIAGSGQHMQRDDWYSSKRSPEDLAAPEAIGQYAAERALARLSARRLT 243
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
TRKCPVLFEAPLA LL F + +SG +LYRKSTFL+DSLGK+IF+ H+QI EDPH+
Sbjct: 244 TRKCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLLDSLGKEIFAPHVQIKEDPHVPSG 303
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
GS+ FD EGV+TQ+R VVK+G+++GYFLSTYSA+KLGM+TTGN+GG+H+L + S++T+
Sbjct: 304 MGSAPFDEEGVRTQRRDVVKDGVVEGYFLSTYSARKLGMQTTGNAGGSHNLTLFSDRTQP 363
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
D+ ML++M TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI+G L+
Sbjct: 364 GDDFAGMLRRMGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITIAGNLR 423
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+MF+QIVAIG+D L R + +GSILIE M IAG+
Sbjct: 424 DMFRQIVAIGADALVRGTKETGSILIEQMTIAGE 457
>gi|207743704|ref|YP_002260096.1| pmba protein (tlde protein) [Ralstonia solanacearum IPO1609]
gi|206595103|emb|CAQ62030.1| pmba protein (tlde protein) [Ralstonia solanacearum IPO1609]
Length = 435
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 248/439 (56%), Positives = 327/439 (74%), Gaps = 4/439 (0%)
Query: 21 LAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMF 80
+A+D+L A+++GA+ ++ E +EG G SV VRKG+I+ IEQN DK + V + + GKK
Sbjct: 1 MARDVLRVARELGATDAATEISEGQGLSVTVRKGEIETIEQNRDKVVGVTVML--GKKR- 57
Query: 81 YGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSID 140
GN+STSDF +L T+ AAYNIARFTA D+ AGL +E LE +P D LY PW L +
Sbjct: 58 -GNASTSDFSPAALRSTVEAAYNIARFTADDDCAGLAEEELLEQHPRDLSLYHPWTLDAE 116
Query: 141 DAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIA 200
A IA E A + I N++ V+ Q SHF+LA S GF+ GYP+S+H IS +PIA
Sbjct: 117 AAVEIARAAEAAALGVSPKIRNSDGASVSAQHSHFVLATSRGFLGGYPYSRHFISCAPIA 176
Query: 201 IKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFE 260
G+ MQRD+WYSS PK L PE IG YAA+R ++RL A++++TRKCPVLFEAPLA
Sbjct: 177 GSGRHMQRDDWYSSKRSPKDLAAPEAIGQYAAERALARLSARRLTTRKCPVLFEAPLAAG 236
Query: 261 LLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQK 320
LL F + +SG +LYRKSTFL+D+LGK+IF+ H+QI EDPH+ GS+ FD EGV+T++
Sbjct: 237 LLGAFVQAVSGGALYRKSTFLLDALGKEIFAPHVQIKEDPHVPSGMGSAPFDEEGVRTRR 296
Query: 321 RLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGL 380
R VVK+G+++GYFLSTYSA+KLGM+TTGN+GG+H+L + S+KT+ D+ ML++M TGL
Sbjct: 297 RDVVKDGVVEGYFLSTYSARKLGMQTTGNAGGSHNLTLFSDKTQPEDDFAGMLRRMGTGL 356
Query: 381 LVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLT 440
LVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI+G L +MF+QIVAIG+D L
Sbjct: 357 LVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITIAGSLPDMFRQIVAIGADALV 416
Query: 441 RNSNTSGSILIENMIIAGK 459
R + +GSILIE M IAG+
Sbjct: 417 RGTKETGSILIEQMTIAGE 435
>gi|421899362|ref|ZP_16329727.1| pmba protein (tlde protein) [Ralstonia solanacearum MolK2]
gi|206590568|emb|CAQ37530.1| pmba protein (tlde protein) [Ralstonia solanacearum MolK2]
Length = 435
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 248/439 (56%), Positives = 327/439 (74%), Gaps = 4/439 (0%)
Query: 21 LAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMF 80
+A+D+L A+++GA+ ++ E +EG G SV VRKG+I+ IEQN DK + V + + GKK
Sbjct: 1 MARDVLRVARELGATDAATEISEGQGLSVTVRKGEIETIEQNRDKVVGVTVML--GKKR- 57
Query: 81 YGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSID 140
GN+STSDF +L T+ AAYNIARFTA D+ AGL +E LE +P D LY PW L +
Sbjct: 58 -GNASTSDFSPAALRSTVEAAYNIARFTADDDCAGLAEEELLEQHPRDLSLYHPWTLDAE 116
Query: 141 DAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIA 200
A IA E A + I N++ V+ Q SHF+LA S GF+ GYP+S+H IS +PIA
Sbjct: 117 AAVEIARAAEAAALAVSPKIRNSDGASVSAQHSHFVLATSRGFLGGYPYSRHFISCAPIA 176
Query: 201 IKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFE 260
G+ MQRD+WYSS PK L PE IG YAA+R ++RL A++++TRKCPVLFEAPLA
Sbjct: 177 GSGRHMQRDDWYSSKRSPKDLAAPEAIGQYAAERALARLSARRLTTRKCPVLFEAPLAAG 236
Query: 261 LLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQK 320
LL F + +SG +LYRKSTFL+D+LGK+IF+ H+QI EDPH+ GS+ FD EGV+T++
Sbjct: 237 LLGAFVQAVSGGALYRKSTFLLDALGKEIFAPHVQIKEDPHVPSGMGSAPFDEEGVRTRR 296
Query: 321 RLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGL 380
R VVK+G+++GYFLSTYSA+KLGM+TTGN+GG+H+L + S+KT+ D+ ML++M TGL
Sbjct: 297 RDVVKDGVVEGYFLSTYSARKLGMQTTGNAGGSHNLTLFSDKTQPEDDFAGMLRRMGTGL 356
Query: 381 LVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLT 440
LVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI+G L +MF+QIVAIG+D L
Sbjct: 357 LVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITIAGSLPDMFRQIVAIGADALV 416
Query: 441 RNSNTSGSILIENMIIAGK 459
R + +GSILIE M IAG+
Sbjct: 417 RGTKETGSILIEQMTIAGE 435
>gi|237747336|ref|ZP_04577816.1| pmbA protein [Oxalobacter formigenes HOxBLS]
gi|229378687|gb|EEO28778.1| pmbA protein [Oxalobacter formigenes HOxBLS]
Length = 452
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 244/450 (54%), Positives = 339/450 (75%), Gaps = 4/450 (0%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S FIY++ +FQQ+A+D+L YA++ GAS +++ +EGNG SV VRKG I+ IE+N DK +
Sbjct: 4 SDFIYTQDQFQQIAEDVLRYARQKGASGAAVGISEGNGLSVSVRKGDIETIERNQDKGIG 63
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
V ++I GKK GN++TSDF ++SL T++AAYNIA FT+ D+ AGLPD + LE +P D
Sbjct: 64 VTVFI--GKKR--GNATTSDFSEQSLKQTVDAAYNIASFTSEDDAAGLPDADMLERHPED 119
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
LY W ++ ++A +A CE AF + I N+E + V Q SHF+ ANS GF GYP
Sbjct: 120 LALYYRWPINTEEAVELAKCCEAAAFETDKRISNSEGSSVNVQHSHFISANSDGFRGGYP 179
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
+S H +S++PIA KG MQRD WY+++ +P +L PE +G YAA+R ++RL A++I TRK
Sbjct: 180 YSSHSLSVAPIAGKGGNMQRDYWYTASRNPLELKTPEEVGTYAARRALARLDARQIGTRK 239
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
CPVLFEAP+A LLN F +SG +LYRKS+FL+ SL K++F HI ++EDPH+ G+ GS
Sbjct: 240 CPVLFEAPVAIGLLNSFVYAVSGGALYRKSSFLLGSLDKQVFPKHIGLLEDPHLRGAMGS 299
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
+ FD+EGV+T +R +V++GI++GYFLS+YSA+KLGMKTTGN+GG+H+L++ SN T +D+
Sbjct: 300 APFDDEGVRTSRREIVQDGIVRGYFLSSYSARKLGMKTTGNAGGSHNLVLHSNVTDENDD 359
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
ML+KM GL+VTELMG GINY+TGDYS+GA G+W+ENG IQY V+EITI+G L++MF
Sbjct: 360 FAAMLQKMGKGLVVTELMGQGINYVTGDYSRGASGFWVENGIIQYPVQEITIAGNLKDMF 419
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
IVA+G+D L R + SGSIL+E M +AG
Sbjct: 420 GNIVAVGNDTLVRGAKESGSILVEQMTVAG 449
>gi|237749485|ref|ZP_04579965.1| pmbA [Oxalobacter formigenes OXCC13]
gi|229380847|gb|EEO30938.1| pmbA [Oxalobacter formigenes OXCC13]
Length = 450
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 247/452 (54%), Positives = 334/452 (73%), Gaps = 4/452 (0%)
Query: 7 NRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
N S F+ S + +Q+A+D+L YA+K GAS +++ +EG+G SV V KG+I+ IE+N DK
Sbjct: 2 NDSDFVSSDDQLKQIAEDVLKYARKKGASGAAVGISEGSGLSVSVHKGEIETIEKNQDKG 61
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ V I++ GKK GN++TSDF K+SL T+ AAYNIA FT+ D+ AGLPD + LE +P
Sbjct: 62 IGVTIFV--GKKR--GNATTSDFSKESLKQTVEAAYNIATFTSEDDAAGLPDTDMLERHP 117
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D LY W ++ ++A +A RCE AF + I N E V SHF+ ANS GF+ G
Sbjct: 118 RDLGLYYRWPINTEEAVELAKRCEAAAFETDKRISNTEGASVNVSHSHFISANSDGFIGG 177
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
YP+S H S++PIA G MQRD WY+S+ +P +L PE +G YAA+R ++RL A+ I T
Sbjct: 178 YPYSSHSFSVAPIAGSGGNMQRDYWYTSSRNPAELKSPEEVGRYAAERALARLNARSIGT 237
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
RKCPVLFEAPLA LLN F +SG +LYRKS+FL+DS+ K++F H+ ++EDPH++G+
Sbjct: 238 RKCPVLFEAPLAIGLLNSFVYGVSGGALYRKSSFLLDSMDKQVFPDHVGLLEDPHVIGAS 297
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
GS+ FD+EGVKT +R +V+NGI++GYFLS+YSA+KLGMKTTGN+GG+H+LI+ S T+ +
Sbjct: 298 GSAPFDDEGVKTSRRQIVENGIVRGYFLSSYSARKLGMKTTGNAGGSHNLILGSKLTEET 357
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
D+ MLKKM TGL+VT+LMG GINY+TGDYS+GA G+W+ENG IQY VEEITI+G L+
Sbjct: 358 DDYAAMLKKMGTGLVVTDLMGQGINYVTGDYSRGASGFWVENGVIQYPVEEITIAGNLKE 417
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
MF+QIVAIG+D R + SGSILI M +AG
Sbjct: 418 MFRQIVAIGADTQIRGAKKSGSILIGEMTVAG 449
>gi|377821395|ref|YP_004977766.1| microcin-processing peptidase [Burkholderia sp. YI23]
gi|357936230|gb|AET89789.1| microcin-processing peptidase [Burkholderia sp. YI23]
Length = 456
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 242/449 (53%), Positives = 335/449 (74%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E +++A D+L YAK++GA+ ++ E +EG+G SV VR+G ++ IE N DK + V+
Sbjct: 12 FPHTQDELKEIASDILRYAKELGATDAAAEISEGDGLSVSVRRGDVETIEHNRDKMVGVM 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+ST+DF +++L DT+ AAYNIARFTA DN AGL DE+ LE P D
Sbjct: 72 VFI--GKKR--GNASTADFTREALRDTVAAAYNIARFTAEDNAAGLADEDLLEKAPQDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW + ++A IA R E AF + + N+E V+ Q S F+LA S GFM+GYP+S
Sbjct: 128 LYHPWDIDAEEAAEIARRAEAAAFAVDKRVSNSEGASVSAQHSQFVLATSRGFMAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS +PIA G++MQRD+WY+S D L PE +G YAA+R ++RL A+ + TRKC
Sbjct: 188 RHYISCAPIAAAGRDMQRDDWYTSKRDAAGLAAPEAVGRYAAERALARLGARSLDTRKCR 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA +L F + +SG +LYRK++FLVDSLGK +F+ HIQI+EDPH+ G GS+
Sbjct: 248 VLFEAPLAAGILGSFVQAVSGGALYRKTSFLVDSLGKPVFAPHIQIVEDPHVKGGMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+TQ+R VV++G++QGYFLS YSA+KLGMKTTGN+GG+H+L + S TK D+ +
Sbjct: 308 FDEEGVRTQRRNVVEDGVVQGYFLSMYSARKLGMKTTGNAGGSHNLTMKSAHTKPEDDFE 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK++TGLL+TELMG G+NY+TGDYS+GA G+W+ENGKI ++VEEIT++ LQ MF+
Sbjct: 368 AMLKKLDTGLLLTELMGQGVNYVTGDYSRGASGFWVENGKIVHAVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
I AIG+D + R + GS+LIE M +AG+
Sbjct: 428 IEAIGADTVVRGTKEIGSVLIERMTVAGQ 456
>gi|413958551|ref|ZP_11397790.1| microcin-processing peptidase [Burkholderia sp. SJ98]
gi|413941131|gb|EKS73091.1| microcin-processing peptidase [Burkholderia sp. SJ98]
Length = 456
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 241/449 (53%), Positives = 334/449 (74%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E +++A D+L YAK++GAS ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDELKEIASDILRYAKELGASDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+ST+DF + +L DT+ AAYNIARFTA D+ AGL + LE +P D
Sbjct: 72 VFI--GKKR--GNASTADFTRDALRDTVAAAYNIARFTAEDSAAGLAEAELLEKSPQDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW + ++A IA R E AF + + N+E V+ Q S F+LA S GFM+GYP+S
Sbjct: 128 LYHPWDIDAEEAAEIARRAEAAAFAVDKRVTNSEGASVSAQHSQFVLATSRGFMAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G++MQRD+WY+S D L PE +G YAA+R ++RL AK + TRKC
Sbjct: 188 RHYIACAPIAAAGRDMQRDDWYTSKRDASALAAPEAVGRYAAERALARLNAKSLDTRKCR 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA +L F + +SG +LYRK+TFLVDSLGK +F+ HIQI+EDPH+ G GS+
Sbjct: 248 VLFEAPLAAGILGAFVQSVSGGALYRKTTFLVDSLGKPVFAPHIQIVEDPHVKGGMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+TQ+R VV++G++QGYFLSTYSA+KLGM+TTGN+GG+H+L + S TK D+ +
Sbjct: 308 FDEEGVRTQRRNVVEDGVVQGYFLSTYSARKLGMQTTGNAGGSHNLTMTSAHTKPEDDFE 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK++TGLL+TELMG G+NY+TGDYS+GA G+W+ENGKI ++VEEIT++ LQ MF+
Sbjct: 368 AMLKKLDTGLLLTELMGQGVNYVTGDYSRGASGFWVENGKIVHAVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
I AIG+D + R + GS+LIE M +AG+
Sbjct: 428 IEAIGADTVVRGTKEIGSVLIERMTVAGQ 456
>gi|312795488|ref|YP_004028410.1| Microcin-processing peptidase 1 (PmbA) [Burkholderia rhizoxinica
HKI 454]
gi|312167263|emb|CBW74266.1| Microcin-processing peptidase 1 (PmbA) [Burkholderia rhizoxinica
HKI 454]
Length = 460
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 238/449 (53%), Positives = 333/449 (74%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++++ + +A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK M V
Sbjct: 16 FPHTQAQLKDIAADILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKTMGVT 75
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I + + GN+STSDF +L DT++AAYNIARFTA DN AGL + LEM+PLD
Sbjct: 76 VFIGNKR----GNASTSDFSPAALRDTVSAAYNIARFTAEDNCAGLAEAELLEMHPLDLD 131
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
L+ PW L DDA IA R E AF+ + I N+E V+ Q S F+LA S GF+ GYP+S
Sbjct: 132 LFHPWELHADDAVEIARRAEQAAFDTDPRIRNSEGASVSAQHSQFVLATSRGFVGGYPYS 191
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G++MQRD+WY+S +L PE +G YAA+R ++R+ A+++ TRKCP
Sbjct: 192 RHAIACAPIAGSGQQMQRDDWYTSRRCAAQLASPEAVGRYAAERALARIGARRLGTRKCP 251
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + SG +LYRK++FL DSLGK +F+ H+Q+ EDPH+ + GS+
Sbjct: 252 VLFEAPLAVGLLGAFVQATSGGALYRKTSFLTDSLGKPVFAPHVQVREDPHVPRALGSAP 311
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T +R VV++G++QGYFLSTYSA+KLGMKTTGN+GG+H+L + S T+ D+ +
Sbjct: 312 FDEEGVRTTRRDVVRDGVVQGYFLSTYSARKLGMKTTGNAGGSHNLSLTSTFTREDDDFR 371
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
ML+K+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG+IQY VEEIT++ LQ MF Q
Sbjct: 372 AMLRKLGTGLLLTELMGQGVNYVTGDYSRGASGFWVENGQIQYPVEEITVASTLQQMFAQ 431
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 432 IVAIGADKIVRGTKETGSVLIEQMTIAGQ 460
>gi|350544105|ref|ZP_08913758.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Candidatus Burkholderia kirkii UZHbot1]
gi|350528103|emb|CCD36483.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Candidatus Burkholderia kirkii UZHbot1]
Length = 452
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 242/449 (53%), Positives = 336/449 (74%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E +++A D+L YAK++GAS ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 8 FPHTQDELKEIASDILRYAKELGASDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 67
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+ST+DF +++L DT+ AAYNIARFTA D+ AGL +E+ LE P D
Sbjct: 68 VFI--GKKR--GNASTADFTREALRDTVAAAYNIARFTAEDSAAGLAEEHLLERAPQDLD 123
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW + ++A IA R E AF + + N+E V+ Q S F+LA S GFM+GYP+S
Sbjct: 124 LYHPWDIDAEEAAEIARRAEAAAFAVDKRVTNSEGASVSAQHSQFVLATSRGFMAGYPYS 183
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G++MQRD+WYSS D L PE +G YAA+R ++RL AK + TRKC
Sbjct: 184 RHYIACAPIAAAGRDMQRDDWYSSKRDATGLAAPEAVGRYAAERALARLGAKSLDTRKCR 243
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA +L F +++SG +LYRK+TFLVDSLGK +F+ HIQI+EDPH+ G GS+
Sbjct: 244 VLFEAPLAAGILGAFVQVVSGGALYRKTTFLVDSLGKPMFAPHIQIVEDPHVKGGMGSAP 303
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+TQ+R VV++G++QGYFLSTYSA+KLGM+TTGN+GG+H+L + S TK D+ +
Sbjct: 304 FDEEGVRTQRRNVVEDGVVQGYFLSTYSARKLGMQTTGNAGGSHNLTMKSTHTKPKDDFE 363
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK++TGLL+TELMG G+N +TGDYS+GA G+W+ENGKI ++VEEIT++ LQ MF+
Sbjct: 364 AMLKKLDTGLLLTELMGQGVNPVTGDYSRGASGFWVENGKIVHAVEEITVASTLQEMFRH 423
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
I AIG+D + R + GS+LIE M +AG+
Sbjct: 424 IEAIGADTVVRGTKEIGSVLIERMTVAGQ 452
>gi|323526917|ref|YP_004229070.1| peptidase U62 [Burkholderia sp. CCGE1001]
gi|323383919|gb|ADX56010.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. CCGE1001]
Length = 456
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 237/449 (52%), Positives = 337/449 (75%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E +++A D+L +AK +G + ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDELKEIASDILRHAKSLGGTDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I + + GN+STSDF ++L DT+ AAYNIARFTA D+ AGL + LE P D
Sbjct: 72 VFIGNKR----GNASTSDFSSQALKDTVAAAYNIARFTAEDDCAGLAEAELLETEPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A IA R E+ AF + I N+E V+ Q S F+LA S GF++GYP+S
Sbjct: 128 LYHPWNLSADEAVEIARRAEDAAFATDPQIKNSEGASVSAQHSQFVLATSRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S ++L PE +G YAA+R ++R+ A+ + TRK P
Sbjct: 188 RHYIACAPIAGSGRNMQRDDWYTSTRSAEQLADPEAVGRYAAQRALARIGARGLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + SG +LYRK++FLVDSLGK +F+ H+QI+EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQATSGGALYRKTSFLVDSLGKPVFAPHVQIVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T++R VVK+G+++GYFLSTYSA+KLGM+TTGN+GG+H+L ++S+ T++ D+ +
Sbjct: 308 FDEEGVRTRQRSVVKDGVVEGYFLSTYSARKLGMQTTGNAGGSHNLSLLSSNTRAEDDFE 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
EML+K+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENGKIQY VEEIT++ LQ MF+
Sbjct: 368 EMLRKLGTGLLLTELMGQGVNYVTGDYSRGASGFWVENGKIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D +TR + +GS+LIE M IAG+
Sbjct: 428 IVAIGADTITRGTKQTGSVLIERMTIAGQ 456
>gi|407714358|ref|YP_006834923.1| PmbA protein [Burkholderia phenoliruptrix BR3459a]
gi|407236542|gb|AFT86741.1| PmbA protein [Burkholderia phenoliruptrix BR3459a]
Length = 452
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 237/449 (52%), Positives = 337/449 (75%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E +++A D+L +AK +G + ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 8 FPHTQDELKEIASDILRHAKSLGGTDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 67
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I + + GN+STSDF ++L DT+ AAYNIARFTA D+ AGL + LE P D
Sbjct: 68 VFIGNKR----GNASTSDFSSQALKDTVAAAYNIARFTAEDDCAGLAEAELLETEPRDLD 123
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A IA R E+ AF + I N+E V+ Q S F+LA S GF++GYP+S
Sbjct: 124 LYHPWNLSADEAVEIARRAEDAAFATDPQIKNSEGASVSAQHSQFVLATSRGFLAGYPYS 183
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S ++L PE +G YAA+R ++R+ A+ + TRK P
Sbjct: 184 RHYIACAPIAGSGRNMQRDDWYTSTRSAEQLADPEAVGRYAAQRALARIGARGLDTRKVP 243
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + SG +LYRK++FLVDSLGK +F+ H+QI+EDPH+ + GS+
Sbjct: 244 VLFEAPLAAGLLGAFVQATSGGALYRKTSFLVDSLGKPVFAPHVQIVEDPHVPRAMGSAP 303
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T++R VVK+G+++GYFLSTYSA+KLGM+TTGN+GG+H+L ++S+ T++ D+ +
Sbjct: 304 FDEEGVRTRQRSVVKDGVVEGYFLSTYSARKLGMQTTGNAGGSHNLSLLSSNTRAEDDFE 363
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
EML+K+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENGKIQY VEEIT++ LQ MF+
Sbjct: 364 EMLRKLGTGLLLTELMGQGVNYVTGDYSRGASGFWVENGKIQYPVEEITVASTLQEMFRH 423
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D +TR + +GS+LIE M IAG+
Sbjct: 424 IVAIGADTITRGTKQTGSVLIERMTIAGQ 452
>gi|17545664|ref|NP_519066.1| PMBA protein (tlde protein) [Ralstonia solanacearum GMI1000]
gi|17427957|emb|CAD14647.1| putative pmba protein (tlde protein) [Ralstonia solanacearum
GMI1000]
Length = 457
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 254/454 (55%), Positives = 335/454 (73%), Gaps = 4/454 (0%)
Query: 6 KNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDK 65
K S F Y + +++A+D+L A+++GA+ ++ E +EG G SV VRKG+I+ IEQN DK
Sbjct: 8 KTDSVFAYRRERLEEMARDVLRIARELGATDAATEISEGQGLSVTVRKGEIETIEQNRDK 67
Query: 66 NMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMN 125
+ V + + GKK GN+STSDF +L T+ AAYNIARFTA D+ AGL +E LE
Sbjct: 68 VVGVTVML--GKKR--GNASTSDFSPAALRSTVEAAYNIARFTADDDCAGLAEEELLERQ 123
Query: 126 PLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMS 185
P D LY PW L + A IA E AF + I N++ V+ Q SHF+LA S GF+
Sbjct: 124 PRDLSLYHPWTLDAEAAVEIARAAEAAAFAVSPKIRNSDGASVSAQHSHFVLATSRGFLG 183
Query: 186 GYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
GYP+S+H IS +PIA G++MQRD+WYSS PK L PE IG YAA+R ++RL A+++S
Sbjct: 184 GYPYSRHFISCAPIAGSGQQMQRDDWYSSKRSPKDLAAPEAIGQYAAERALARLAARRLS 243
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
TRKCPVLFEAPLA LL F + +SG +LYRKSTFL+DSLGK IF+ H+QI EDPH+
Sbjct: 244 TRKCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLLDSLGKAIFAPHVQIKEDPHVPSG 303
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
GS+ FD EGV+TQ+R VV++G+++GYFLSTYSA+KLGM+TTGN+GG+H+L + S++T+
Sbjct: 304 MGSAPFDEEGVRTQRRDVVRDGVVEGYFLSTYSARKLGMQTTGNAGGSHNLTLFSDRTQP 363
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
D+ ML++M TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI+G L+
Sbjct: 364 GDDFAGMLRRMGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITIAGNLR 423
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+MF+QIVAIG+D L R + +GSILIE M IAG+
Sbjct: 424 DMFRQIVAIGADALIRGTKETGSILIEQMTIAGE 457
>gi|91784774|ref|YP_559980.1| microcin-processing peptidase 1 [Burkholderia xenovorans LB400]
gi|91688728|gb|ABE31928.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Burkholderia xenovorans LB400]
Length = 456
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 238/449 (53%), Positives = 335/449 (74%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E +++A D+L +AK +G + ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDELKEIASDILRHAKSLGGTDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I + + GN+STSDF ++L DT+ AAYNIARFTA D+ AGL + LE P D
Sbjct: 72 VFIGNKR----GNASTSDFSSQALKDTVAAAYNIARFTAEDDCAGLAEAELLETAPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A IA R E+ AF + I N+E V+ Q S F+LA S GF++GYP+S
Sbjct: 128 LYHPWNLSADEAVEIARRAEDAAFATDPQIKNSEGASVSAQHSQFVLATSRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S ++L PE +G YAA+R ++R+ A+ + TRK P
Sbjct: 188 RHYIACAPIAGSGRNMQRDDWYTSTRSAEELANPEAVGRYAAQRALARIGARGLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + SG +LYRK+TFLVDSLGK +F+ H+Q++EDPHI + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQATSGGALYRKTTFLVDSLGKPVFAPHVQVVEDPHIPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T++R VVK+G+++GYFLSTYSA+KLGM+TTGN+GG+H+L ++S+ T+ D+ +
Sbjct: 308 FDEEGVRTRQRSVVKDGVVEGYFLSTYSARKLGMQTTGNAGGSHNLSLLSSNTRPEDDFE 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
EML+K+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENGKIQY VEEIT++ LQ MF
Sbjct: 368 EMLRKLGTGLLLTELMGQGVNYVTGDYSRGASGFWVENGKIQYPVEEITVASTLQEMFHH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D +TR + +GS+LIE M IAG+
Sbjct: 428 IVAIGADTITRGTKKTGSVLIERMTIAGQ 456
>gi|170696333|ref|ZP_02887463.1| peptidase U62 modulator of DNA gyrase [Burkholderia graminis C4D1M]
gi|170138739|gb|EDT06937.1| peptidase U62 modulator of DNA gyrase [Burkholderia graminis C4D1M]
Length = 456
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 237/449 (52%), Positives = 335/449 (74%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E +++A D+L +AK +G + ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDELKEIASDILRHAKSLGGTDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I + + GN+STSDF ++L DT+ AAYNIARFTA D+ AGL + LE P D
Sbjct: 72 VFIGNKR----GNASTSDFSSQALKDTVAAAYNIARFTAEDDCAGLAEAELLETEPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A IA R E+ AF + I N+E V+ Q S F+LA S GF++GYP+S
Sbjct: 128 LYHPWNLSADEAVEIARRAEDAAFATDPQIKNSEGASVSAQHSQFVLATSRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S ++L PE +G YAA+R ++R+ A+ + TRK P
Sbjct: 188 RHYIACAPIAGSGRNMQRDDWYTSTRSAEQLADPEAVGRYAAQRALARIGARGLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + SG +LYRK+TFLVDSLGK +F+ H+QI+EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQATSGGALYRKTTFLVDSLGKPVFAPHVQIVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T++R VVK+G+++GYFLSTYSA+KLGM+TTGN+GG+H+L + S+ T+ D+ +
Sbjct: 308 FDEEGVRTRQRSVVKDGVVEGYFLSTYSARKLGMQTTGNAGGSHNLSLQSSSTRPEDDFE 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+ML+K+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENGKIQY VEEIT++ LQ MF+
Sbjct: 368 QMLRKLGTGLLLTELMGQGVNYVTGDYSRGASGFWVENGKIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D +TR + +GS+LIE M IAG+
Sbjct: 428 IVAIGADTITRGTKQTGSVLIERMTIAGQ 456
>gi|385208589|ref|ZP_10035457.1| putative Zn-dependent protease-like protein [Burkholderia sp.
Ch1-1]
gi|385180927|gb|EIF30203.1| putative Zn-dependent protease-like protein [Burkholderia sp.
Ch1-1]
Length = 456
Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust.
Identities = 237/449 (52%), Positives = 335/449 (74%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E +++A D+L +AK +G + ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDELKEIASDILRHAKSLGGTDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I + + GN+STSDF ++L DT+ AAYNIARFTA D+ AGL + LE P D
Sbjct: 72 VFIGNKR----GNASTSDFSSQALKDTVAAAYNIARFTAEDDCAGLAEAELLETAPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A IA R E+ AF + I N+E V+ Q S F+LA S GF++GYP+S
Sbjct: 128 LYHPWNLSADEAVEIARRAEDAAFATDPQIKNSEGASVSAQHSQFVLATSRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H ++ +PIA G+ MQRD+WY+S ++L PE +G YAA+R ++R+ A+ + TRK P
Sbjct: 188 RHYVACAPIAGSGRNMQRDDWYTSTRSAEELANPEAVGRYAAQRALARIGARGLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + SG +LYRK+TFLVDSLGK +F+ H+Q++EDPHI + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQATSGGALYRKTTFLVDSLGKPVFAPHVQVVEDPHIPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T++R VVK+G+++GYFLSTYSA+KLGM+TTGN+GG+H+L ++S+ T+ D+ +
Sbjct: 308 FDEEGVRTRQRSVVKDGVVEGYFLSTYSARKLGMQTTGNAGGSHNLSLLSSNTRPEDDFE 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
EML+K+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENGKIQY VEEIT++ LQ MF
Sbjct: 368 EMLRKLGTGLLLTELMGQGVNYVTGDYSRGASGFWVENGKIQYPVEEITVASTLQEMFHH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D +TR + +GS+LIE M IAG+
Sbjct: 428 IVAIGADTITRGTKKTGSVLIERMTIAGQ 456
>gi|307730583|ref|YP_003907807.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. CCGE1003]
gi|307585118|gb|ADN58516.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. CCGE1003]
Length = 456
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 237/449 (52%), Positives = 337/449 (75%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E +++A D+L +AK +G + ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDELKEIASDILRHAKSLGGTDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I + + GN+STSDF ++L DT+ AAYNIARFTA D+ AGL + LE P D
Sbjct: 72 VFIGNKR----GNASTSDFSSQALKDTVAAAYNIARFTAEDDCAGLAEAELLEKEPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A IA R E+ AF + I N+E V+ Q S F+LA S GF++GYP+S
Sbjct: 128 LYHPWNLSADEAVEIARRAEDAAFATDPQIKNSEGASVSAQHSQFVLATSRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S + ++L PE +G YAA+R ++R+ A+ + TRK P
Sbjct: 188 RHYIACAPIAGSGRNMQRDDWYTSMRNAEQLADPEAVGRYAAQRALARIGARGLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + SG +LYRK++FLVDSLGK +F+ H+QI+EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQATSGGALYRKTSFLVDSLGKPVFAPHVQIVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T++R VVK+G+++GYFLSTYSA+KLGM+TTGN+GG+H+L + S+ T++ D+ +
Sbjct: 308 FDEEGVRTRQRSVVKDGVVEGYFLSTYSARKLGMQTTGNAGGSHNLSLQSSNTRAEDDFE 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
EML+K+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENGKIQY VEEIT++ LQ MF+
Sbjct: 368 EMLRKLGTGLLLTELMGQGVNYVTGDYSRGASGFWVENGKIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D +TR + +GS+LIE M IAG+
Sbjct: 428 IVAIGADTITRGTKQTGSVLIERMTIAGQ 456
>gi|374367560|ref|ZP_09625621.1| microcin-processing peptidase 1 [Cupriavidus basilensis OR16]
gi|373100863|gb|EHP41923.1| microcin-processing peptidase 1 [Cupriavidus basilensis OR16]
Length = 456
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 244/458 (53%), Positives = 327/458 (71%), Gaps = 4/458 (0%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIE 60
M+Q + F Y++++ ++A D+L A+++GA+ ++ E +EG+G SV VRKG+++ IE
Sbjct: 1 MDQSADQTAHFTYTQAQLSEMAADVLRVARELGATDAATEISEGSGLSVSVRKGQVETIE 60
Query: 61 QNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDEN 120
QN DK + V + I G++ GN+STSDF +L T AAYNIARFTA D+ AGL +E
Sbjct: 61 QNRDKVVGVTVMI--GQRR--GNASTSDFSPAALRATAEAAYNIARFTAEDDCAGLAEEA 116
Query: 121 TLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANS 180
LE +P D L+ PW + + A +A R E AF + I N++ V+ Q S F+LA S
Sbjct: 117 LLERDPQDLHLFHPWNIDAEQAIELARRSEAAAFAVSPRIRNSDGASVSAQHSQFVLATS 176
Query: 181 HGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLK 240
GF GYP+S+H IS +PIA G MQRD+WYSS P L PE IG YAA+R+++RL
Sbjct: 177 RGFTGGYPYSRHFISCAPIAGTGSGMQRDDWYSSKRAPGALAAPEDIGRYAAERSLARLN 236
Query: 241 AKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDP 300
A+++STR+CPVLFEAPLA LL F + +SG +LYRKSTFL D+LGK +F+ HI I E P
Sbjct: 237 ARQLSTRRCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLYDTLGKAVFAPHIHIHEQP 296
Query: 301 HILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIIS 360
H+ G+ GS+ FD EGVKT R VV+ G+++GYFLSTYSA+KLGMKTTGN+GG+H+L + S
Sbjct: 297 HLPGAMGSAPFDEEGVKTHARDVVRGGVVEGYFLSTYSARKLGMKTTGNAGGSHNLTLSS 356
Query: 361 NKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITI 420
T D+ ML+K+ TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI
Sbjct: 357 KLTTPDDDFAGMLRKLGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITI 416
Query: 421 SGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+G ++ MF+QIVAIG+D L R + +GS+LIE M IAG
Sbjct: 417 AGNMKEMFQQIVAIGADSLVRGTKETGSVLIEQMTIAG 454
>gi|194290287|ref|YP_002006194.1| peptidase, for maturation of microcin b17 and degradation of ccda
[Cupriavidus taiwanensis LMG 19424]
gi|193224122|emb|CAQ70131.1| peptidase, for maturation of Microcin B17 and degradation of CcdA
[Cupriavidus taiwanensis LMG 19424]
Length = 455
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/458 (53%), Positives = 333/458 (72%), Gaps = 4/458 (0%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIE 60
M+Q+ + + F Y++++ ++A D+L A+++GA+ ++ E +EG+G SV VRKG+++ IE
Sbjct: 1 MDQIAEQTAHFTYTQAQLSEMAADVLRVARELGATDAATEISEGSGLSVSVRKGQVETIE 60
Query: 61 QNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDEN 120
QN DK + V + I GK+ GN+STSDF +L T AAYNIARFTA D+ AGL +E
Sbjct: 61 QNRDKVVGVTVMI--GKRR--GNASTSDFSPAALRATAEAAYNIARFTAEDDCAGLAEEE 116
Query: 121 TLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANS 180
LE P D L+ PW L + A IA R E AF + I N++ V+ Q S F+LA +
Sbjct: 117 LLERAPQDLDLFHPWALDAEAAIDIATRAEAAAFAVSPRIRNSDGASVSAQHSQFVLATT 176
Query: 181 HGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLK 240
GF GYP+S+H IS +PIA G MQRD+WYSS P L PE IG YAA+R ++RL+
Sbjct: 177 RGFSGGYPYSRHFISCAPIAGSGSGMQRDDWYSSKRSPLALAAPEDIGRYAAERALARLQ 236
Query: 241 AKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDP 300
A+K++TR+CPVLFEAPLA LL F + +SG +LYRKSTFL DSLG+ +F+ H+QI E P
Sbjct: 237 ARKLTTRRCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLCDSLGQTVFAPHVQIHEQP 296
Query: 301 HILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIIS 360
H+ G+ GS+ FD EGV+T++R VVK+G++QGYFLSTYSA+KLGM+TTGN+GG+H+L + S
Sbjct: 297 HVPGAMGSAPFDEEGVRTRERDVVKDGVVQGYFLSTYSARKLGMQTTGNAGGSHNLTLSS 356
Query: 361 NKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITI 420
+ T+ D+ ML+K+ TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI
Sbjct: 357 SLTQPGDDFPAMLRKLGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITI 416
Query: 421 SGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+G + MFKQIVAIG+D L R + +GSIL+E M IAG
Sbjct: 417 AGNMAEMFKQIVAIGADALVRGTKETGSILLEQMTIAG 454
>gi|430809232|ref|ZP_19436347.1| peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Cupriavidus sp. HMR-1]
gi|429498376|gb|EKZ96886.1| peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Cupriavidus sp. HMR-1]
Length = 455
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 249/458 (54%), Positives = 332/458 (72%), Gaps = 4/458 (0%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIE 60
M Q + + F Y++ + + +A D+L A+++GA+ ++ E +EG+G SV VRKG+++ IE
Sbjct: 1 MSQTAEQTAHFTYTQDQLKTMAADVLRVARELGATDAATEISEGSGLSVSVRKGEVETIE 60
Query: 61 QNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDEN 120
QN DK + V + I GK+ GN+STSDF +L T AAYNIARFTA D+ AGL +E
Sbjct: 61 QNRDKVVGVTVMI--GKRR--GNASTSDFSAAALRATAEAAYNIARFTAEDDCAGLAEEE 116
Query: 121 TLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANS 180
LE +P D L+ PW + + A IA R E AF + I N++ V+ Q S F+LA S
Sbjct: 117 LLERDPQDLDLFHPWTIDAEGAIDIARRAEAAAFAVSPKIRNSDGASVSAQHSQFVLATS 176
Query: 181 HGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLK 240
GF GYP+S+H IS +PIA G MQRD+WYSS P L +PE IG YAA+R ++RL
Sbjct: 177 RGFSGGYPYSRHFISCAPIAGSGGGMQRDDWYSSKRAPGALAEPEAIGRYAAERALARLN 236
Query: 241 AKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDP 300
A+K+STRKCPVLFEAPLA LL F + +SG +LYRKSTFL D+LGK++F+ HIQ+ E P
Sbjct: 237 ARKLSTRKCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLYDTLGKEVFAPHIQVYERP 296
Query: 301 HILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIIS 360
H+ G+ GS+ FD EGV+T +R VV++G++QGYFLSTYSA+KLGMKTTGN+GG+H+L + S
Sbjct: 297 HVPGAMGSAPFDEEGVRTHERDVVRDGVVQGYFLSTYSARKLGMKTTGNAGGSHNLTLTS 356
Query: 361 NKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITI 420
++T++ D+ MLKKM TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI
Sbjct: 357 SQTQAGDDFVGMLKKMGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITI 416
Query: 421 SGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+G + M +QIVA+G+D L R + +GSILIE M IAG
Sbjct: 417 AGNMVEMLRQIVAVGADALVRGTKETGSILIEQMTIAG 454
>gi|94311506|ref|YP_584716.1| peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Cupriavidus metallidurans
CH34]
gi|93355358|gb|ABF09447.1| peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Cupriavidus metallidurans
CH34]
Length = 455
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 249/458 (54%), Positives = 332/458 (72%), Gaps = 4/458 (0%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIE 60
M Q + + F Y++ + + +A D+L A+++GA+ ++ E +EG+G SV VRKG+++ IE
Sbjct: 1 MSQTAEQTAHFTYTQDQLKAMAADVLRVARELGATDAATEISEGSGLSVSVRKGEVETIE 60
Query: 61 QNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDEN 120
QN DK + V + I GK+ GN+STSDF +L T AAYNIARFTA D+ AGL +E
Sbjct: 61 QNRDKVVGVTVMI--GKRR--GNASTSDFSAAALRATAEAAYNIARFTAEDDCAGLAEEE 116
Query: 121 TLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANS 180
LE +P D L+ PW + + A IA R E AF + I N++ V+ Q S F+LA S
Sbjct: 117 LLERDPQDLDLFHPWTIDAEGAIDIARRAEAAAFAVSPKIRNSDGASVSAQHSQFVLATS 176
Query: 181 HGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLK 240
GF GYP+S+H IS +PIA G MQRD+WYSS P L +PE IG YAA+R ++RL
Sbjct: 177 RGFSGGYPYSRHFISCAPIAGSGGGMQRDDWYSSKRAPGALAEPEAIGRYAAERALARLN 236
Query: 241 AKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDP 300
A+K+STRKCPVLFEAPLA LL F + +SG +LYRKSTFL D+LGK++F+ HIQ+ E P
Sbjct: 237 ARKLSTRKCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLYDTLGKEVFAPHIQVYERP 296
Query: 301 HILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIIS 360
H+ G+ GS+ FD EGV+T +R VV++G++QGYFLSTYSA+KLGMKTTGN+GG+H+L + S
Sbjct: 297 HVPGAMGSAPFDEEGVRTHERDVVRDGVVQGYFLSTYSARKLGMKTTGNAGGSHNLTLTS 356
Query: 361 NKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITI 420
++T++ D+ MLKKM TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI
Sbjct: 357 SQTQAGDDFVGMLKKMGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITI 416
Query: 421 SGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+G + M +QIVA+G+D L R + +GSILIE M IAG
Sbjct: 417 AGNMVEMLRQIVAVGADALVRGTKETGSILIEQMTIAG 454
>gi|186475546|ref|YP_001857016.1| peptidase U62 modulator of DNA gyrase [Burkholderia phymatum
STM815]
gi|184192005|gb|ACC69970.1| peptidase U62 modulator of DNA gyrase [Burkholderia phymatum
STM815]
Length = 456
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 233/449 (51%), Positives = 335/449 (74%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E +++A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDELKEIASDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I + + GN+STSDF ++L DT+ AAYNIARFTA D+ AGL +E LE +P D
Sbjct: 72 VFIGNKR----GNASTSDFSSEALKDTVMAAYNIARFTAEDDCAGLAEEELLETHPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW L D+A +A R E+ AF N +I N+E V+ Q S F+L S GF++GYP+S
Sbjct: 128 LYHPWNLDADEAVELARRAEDAAFATNPMIKNSEGASVSAQHSQFVLGTSRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S +L PE +G YAA+R ++R+ A+ + TRK P
Sbjct: 188 RHYIACAPIAGSGRNMQRDDWYTSKRSAGELADPEAVGRYAAERALARMGARSLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + SG +LYRK++FLVDSLGK +F+ H+Q++EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQATSGGALYRKTSFLVDSLGKPVFAPHVQVVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T++R VVK+G+++GYFLSTYSA+KLGM TTGN+GG+H+L + S+ T+ +D+ +
Sbjct: 308 FDEEGVRTKQRSVVKDGVVEGYFLSTYSARKLGMPTTGNAGGSHNLSLRSSLTQPTDDFE 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
EML+K+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENGKIQY VEEIT++ LQ MF+
Sbjct: 368 EMLRKLGTGLLLTELMGQGVNYVTGDYSRGASGFWVENGKIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+VAIG+D + R + +GS+LIE M +AG+
Sbjct: 428 VVAIGADTIVRGTKQTGSVLIERMTVAGQ 456
>gi|339326707|ref|YP_004686400.1| microcin-processing peptidase PmbA [Cupriavidus necator N-1]
gi|338166864|gb|AEI77919.1| microcin-processing peptidase PmbA [Cupriavidus necator N-1]
Length = 455
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 246/458 (53%), Positives = 332/458 (72%), Gaps = 4/458 (0%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIE 60
M+Q+ + + F Y++++ ++A D+L A+++GA+ ++ E +EG+G SV VRKG+++ IE
Sbjct: 1 MDQIAEQTAHFTYTQAQLSEMAADVLRVARELGATDAATEISEGSGLSVSVRKGQVETIE 60
Query: 61 QNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDEN 120
QN DK + V + I GK+ GN+STSDF +L T AAYNIARFTA D+ AGL +E
Sbjct: 61 QNRDKVVGVTVMI--GKRR--GNASTSDFSPAALRATAEAAYNIARFTAEDDCAGLAEEE 116
Query: 121 TLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANS 180
LE P D +L+ PW L + A IA R E AF + I N++ V+ Q S F+LA +
Sbjct: 117 LLERAPQDLELFHPWALDAERAIDIATRAEAAAFAVSPRIRNSDGASVSAQHSQFVLATT 176
Query: 181 HGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLK 240
GF GYP+S+H IS +PIA G MQRD+WYSS P L PE IG YAA+R ++RL+
Sbjct: 177 RGFSGGYPYSRHFISCAPIAGSGSGMQRDDWYSSKRSPLALAAPEDIGRYAAERALARLQ 236
Query: 241 AKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDP 300
A+++STR+CPVLFEAPLA LL F + +SG +LYRKSTFL DSLG+ +F+ HIQI E P
Sbjct: 237 ARQLSTRRCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLCDSLGQAVFAPHIQIHEQP 296
Query: 301 HILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIIS 360
H G+ GS+ FD EGV+T+ R VV++G++QGYFLSTYSA+KLGM+TTGN+GG+H+L + S
Sbjct: 297 HTPGAMGSAPFDEEGVRTRARDVVRDGVVQGYFLSTYSARKLGMQTTGNAGGSHNLTLTS 356
Query: 361 NKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITI 420
+ T+ D+ ML+K+ TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI
Sbjct: 357 SLTEPGDDFPAMLRKLGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITI 416
Query: 421 SGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+G + MF+QIVAIG+D L R + +GSIL+E M IAG
Sbjct: 417 AGNMAEMFQQIVAIGADALVRGTKETGSILLEQMTIAG 454
>gi|452127301|ref|ZP_21939884.1| protease [Bordetella holmesii F627]
gi|452130672|ref|ZP_21943244.1| protease [Bordetella holmesii H558]
gi|451920597|gb|EMD70743.1| protease [Bordetella holmesii H558]
gi|451922396|gb|EMD72541.1| protease [Bordetella holmesii F627]
Length = 454
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 230/443 (51%), Positives = 319/443 (72%), Gaps = 4/443 (0%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ F +L + +L YA++IGAS + E +E G SV VRK I+ +EQ D+++++ +Y
Sbjct: 15 ARFSELVEQVLGYARQIGASDAVAEVSESLGLSVSVRKNDIETVEQTRDRSLDLTVYAGQ 74
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
+ G++STSDF + +L T+ AA++IAR TA+D AGLPD L LD L+ PW
Sbjct: 75 SR----GSASTSDFSEAALRQTVEAAWHIARHTAADEAAGLPDAEMLATEHLDLDLHHPW 130
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
+ A +A R E A +S I N + GV T + F++ N+ GFM GYP+S+H +S
Sbjct: 131 VIDTAAAAELALRGERAARAVDSRITNTDGAGVNTYEGQFVMGNTRGFMGGYPYSRHSLS 190
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
++PIA +G +MQRD WY+S DP L PE +G YAA+RT++RL A+++ T K PVLFEA
Sbjct: 191 VAPIAGRGSKMQRDYWYTSERDPALLASPEDVGRYAAERTLARLSARRLRTTKAPVLFEA 250
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
PLA LL F + +SG +LYRK+TFLVDSLGK IF+ HI + EDPH+ G GSS+FD+EG
Sbjct: 251 PLALGLLGAFVQAVSGGALYRKATFLVDSLGKPIFADHIDVQEDPHVRGGMGSSAFDDEG 310
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+TQ R VV G ++GYFLS+Y+A+KLGM TTGN+GG+H+L + S T+ +D+ + MLKK
Sbjct: 311 VRTQARRVVAGGTLEGYFLSSYTARKLGMSTTGNAGGSHNLSLTSRLTRPTDDFRAMLKK 370
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
+ TGLLVTEL+G G+NY+TGDYS+GAFGYW+ENG+IQ++VEEITI+ L +MF+QIVA+G
Sbjct: 371 LGTGLLVTELIGQGVNYLTGDYSRGAFGYWVENGQIQHAVEEITIAANLADMFRQIVAVG 430
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
+D L+R + T+GSILIE M IAG
Sbjct: 431 ADTLSRGTKTTGSILIEQMSIAG 453
>gi|73540614|ref|YP_295134.1| microcin-processing peptidase 1 [Ralstonia eutropha JMP134]
gi|72118027|gb|AAZ60290.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Ralstonia eutropha JMP134]
Length = 460
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 248/458 (54%), Positives = 336/458 (73%), Gaps = 4/458 (0%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIE 60
M+ + + + F +++++ ++A D+L A+++GA+ ++ E +EG+G SV VRKG+++ IE
Sbjct: 6 MDSIAEQTAHFTHTQAQLSEMAADVLRVARELGATDAATEISEGSGLSVSVRKGQVETIE 65
Query: 61 QNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDEN 120
QN DK + V + I GK+ GN+STSDF +L T AAYNIARFTA D+ AGL +E
Sbjct: 66 QNRDKVVGVTVLI--GKRR--GNASTSDFSPAALRATAEAAYNIARFTAEDDCAGLAEEE 121
Query: 121 TLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANS 180
LE NP D L+ PW + + A IA R E AF + I N++ V+ Q S F+LA +
Sbjct: 122 LLERNPQDLDLFHPWTVDAEGAIDIARRAEAAAFAVSPRIKNSDGASVSAQHSQFVLATT 181
Query: 181 HGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLK 240
GF+ GYP+S+H IS +PIA G MQRD+WYSS P L PE IG YAA+R ++RL
Sbjct: 182 RGFIGGYPYSRHFISCAPIAGSGGGMQRDDWYSSKRSPLALAVPEDIGRYAAERALARLN 241
Query: 241 AKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDP 300
A+K+STR+CPVLFEAPLA LL F + +SG +LYRKSTFL D+LGK +F+ HIQI E P
Sbjct: 242 ARKLSTRRCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLHDTLGKAVFAPHIQIHERP 301
Query: 301 HILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIIS 360
H+ G+ GS+ FD EGV+T++R VV++G+++GYFLSTYSA+KLGMKTTGN+GG+H+L + S
Sbjct: 302 HVPGAMGSAPFDEEGVRTRERDVVRDGVVEGYFLSTYSARKLGMKTTGNAGGSHNLTLTS 361
Query: 361 NKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITI 420
+ T +SD+ + MLKK+ TGLLVTELMG G+NY+TGDYS+GA GYW+ENG+IQY VEEITI
Sbjct: 362 DLTTASDDFRGMLKKLGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGEIQYPVEEITI 421
Query: 421 SGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+G + MF+QIVAIG+D L R + +GSILIE M IAG
Sbjct: 422 AGNMGEMFRQIVAIGADSLVRGTKETGSILIEQMTIAG 459
>gi|113868663|ref|YP_727152.1| microcin-processing peptidase 1 [Ralstonia eutropha H16]
gi|113527439|emb|CAJ93784.1| Microcin-processing peptidase 1 [Ralstonia eutropha H16]
Length = 455
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 246/458 (53%), Positives = 332/458 (72%), Gaps = 4/458 (0%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIE 60
M+Q+ + + F Y++++ ++A D+L A+++GA+ ++ E +EG+G SV VRKG+++ IE
Sbjct: 1 MDQIAEQTAHFTYTQAQLSEMAADVLRVARELGATDAATEISEGSGLSVSVRKGQVETIE 60
Query: 61 QNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDEN 120
QN DK + V + I GK+ GN+STSDF +L T AAYNIARFTA D+ AGL +E
Sbjct: 61 QNRDKVVGVTVMI--GKRR--GNASTSDFSPAALRATAEAAYNIARFTAEDDCAGLAEEE 116
Query: 121 TLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANS 180
LE P D +L+ PW L + A IA R E AF + I N++ V+ Q S F+LA +
Sbjct: 117 LLERAPQDLELFHPWALDAERAIDIATRAEAAAFAVSPRIRNSDGASVSAQHSQFVLATT 176
Query: 181 HGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLK 240
GF GYP+S+H IS +PIA G MQRD+WYSS P L PE IG YAA+R ++RL+
Sbjct: 177 RGFSGGYPYSRHFISCAPIAGSGSGMQRDDWYSSKRSPLALAAPEDIGRYAAERALARLQ 236
Query: 241 AKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDP 300
A+++STR+CPVLFEAPLA LL F + +SG +LYRKSTFL DSLG+ +F+ HIQI E P
Sbjct: 237 ARQLSTRRCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLCDSLGQAVFAPHIQIHEQP 296
Query: 301 HILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIIS 360
H G+ GS+ FD EGV+T+ R VV++G++QGYFLSTYSA+KLGM+TTGN+GG+H+L + S
Sbjct: 297 HTPGAMGSAPFDEEGVRTRARDVVRDGVVQGYFLSTYSARKLGMQTTGNAGGSHNLTLTS 356
Query: 361 NKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITI 420
+ T+ D+ ML+K+ TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI
Sbjct: 357 SLTEPGDDFPAMLRKLGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITI 416
Query: 421 SGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+G + MF+QIVAIG+D L R + +GSIL+E M IAG
Sbjct: 417 AGNMAEMFQQIVAIGADSLVRGTKETGSILLEQMTIAG 454
>gi|390568728|ref|ZP_10249023.1| peptidase U62 modulator of DNA gyrase [Burkholderia terrae BS001]
gi|420256227|ref|ZP_14759082.1| putative Zn-dependent protease-like protein [Burkholderia sp. BT03]
gi|389939332|gb|EIN01166.1| peptidase U62 modulator of DNA gyrase [Burkholderia terrae BS001]
gi|398043641|gb|EJL36530.1| putative Zn-dependent protease-like protein [Burkholderia sp. BT03]
Length = 456
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 234/449 (52%), Positives = 334/449 (74%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E +++A D+L +AK +GAS ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDELKEIASDILRHAKSLGASDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I + + GN+STSDF ++L DT+ AAYNIARFTA D+ AGL +E LE +P D
Sbjct: 72 VFIGNKR----GNASTSDFSSEALKDTVMAAYNIARFTAEDDCAGLAEEELLEKDPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW L D+A +A R E+ AF + I N+E V+ Q S F+L S GF+SGYP+S
Sbjct: 128 LYHPWNLDADEAVELARRAEDAAFAVSPQIKNSEGASVSAQHSQFVLGTSRGFLSGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H ++ +PIA + MQRD+WY+S +L PE +G YAA+R ++R+ A+ + TRK P
Sbjct: 188 RHYVACAPIAGSARNMQRDDWYTSKRSAGELADPEAVGRYAAERALARMGARGLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + SG +LYRK+TFLVDSLGK +F+ H+Q++EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQATSGGALYRKTTFLVDSLGKPVFAPHVQVVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T++R VVK+G+++GYFLSTYSA+KLGM TTGN+GG+H+L + S+ T++SD+ +
Sbjct: 308 FDEEGVRTKQRSVVKDGVVEGYFLSTYSARKLGMPTTGNAGGSHNLSLRSSLTQASDDFE 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
EML+K+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENGKIQY VEEIT++ LQ MF+
Sbjct: 368 EMLRKLGTGLLLTELMGQGVNYVTGDYSRGASGFWVENGKIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+VAIG+D + R + +GS+LIE M +AG+
Sbjct: 428 VVAIGADTIVRGTKQTGSVLIERMTVAGQ 456
>gi|187924941|ref|YP_001896583.1| peptidase U62 modulator of DNA gyrase [Burkholderia phytofirmans
PsJN]
gi|187716135|gb|ACD17359.1| peptidase U62 modulator of DNA gyrase [Burkholderia phytofirmans
PsJN]
Length = 456
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 235/449 (52%), Positives = 333/449 (74%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E +++A D+L +AK +G + ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDELKEIASDILRHAKSLGGTDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I + + GN+STSDF ++L DT+ AAYNIARFTA D+ AGL + LE P D
Sbjct: 72 VFIGNKR----GNASTSDFSSQALKDTVAAAYNIARFTAEDDCAGLAEAELLETAPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A IA R E+ AF + I N+E V+ Q S F+LA S GF++GYP+S
Sbjct: 128 LYHPWNLSADEAVEIARRAEDAAFATDPQIKNSEGASVSAQHSQFVLATSRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA + MQRD+WY+S ++L PE +G YAA+R ++R+ A+ + TRK P
Sbjct: 188 RHYIACAPIAGSARNMQRDDWYTSTRSAEELADPEAVGRYAAQRALARIGARGLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA +L F + SG +LYRK++FLVDSLGK +F+ H+Q++EDPHI + GS+
Sbjct: 248 VLFEAPLAAGILGAFVQATSGGALYRKTSFLVDSLGKPVFAPHVQVVEDPHIARAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T++R VVK+G+++GYFLSTYSA+KLGM+TTGN+GG+H+L + S+ T+ D+ +
Sbjct: 308 FDEEGVRTKQRSVVKDGVVEGYFLSTYSARKLGMQTTGNAGGSHNLSLRSSNTRPEDDFE 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
EML+K+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENGKIQY VEEIT++ LQ MF
Sbjct: 368 EMLRKLGTGLLLTELMGQGVNYVTGDYSRGASGFWVENGKIQYPVEEITVASTLQEMFHH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D +TR + +GS+LIE M IAG+
Sbjct: 428 IVAIGADTITRGTKQTGSVLIERMTIAGQ 456
>gi|421748159|ref|ZP_16185793.1| microcin-processing peptidase 1 [Cupriavidus necator HPC(L)]
gi|409773148|gb|EKN54999.1| microcin-processing peptidase 1 [Cupriavidus necator HPC(L)]
Length = 456
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 245/448 (54%), Positives = 328/448 (73%), Gaps = 4/448 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F Y++++ ++A D+L A+++GA+ ++ E +EG+G SV VRKG+++ IEQN DK + V
Sbjct: 12 FTYTQAQLSEMAADVLRVARELGATDAATEISEGSGLSVSVRKGEVETIEQNRDKVVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+ I GK+ GN+STSDF +L T AAYNIARFTA D+ AGL +E LE +PLD
Sbjct: 72 VMI--GKRR--GNASTSDFSPAALRATAEAAYNIARFTAEDDCAGLAEEELLERDPLDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
L+ PW + + A IA R E AF + I N++ V+ Q S F+LA + GF+ GYP+S
Sbjct: 128 LFHPWAIDAEQAIEIARRAEAAAFAVSPRIRNSDGASVSAQHSQFVLATTRGFVGGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H +S +PIA G MQRD+WYSS P+ L +PE IG YAA+R ++RL A+K+STR+CP
Sbjct: 188 RHFVSCAPIAGSGGGMQRDDWYSSKRAPEALAEPEAIGRYAAERALARLHARKLSTRRCP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRKSTFL D+LGK +F+ HI I E PH+ G+ GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKSTFLYDTLGKPVFAPHIDIHERPHVPGAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGVKT+ R VV++G++QGYFLSTYSA+KLGM+TTGN+GG+H+L + S T+ D+
Sbjct: 308 FDEEGVKTRARDVVRDGVVQGYFLSTYSARKLGMQTTGNAGGSHNLSLTSKLTEPGDDFP 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
ML+K+ TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI+G + MF+Q
Sbjct: 368 AMLRKLGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITIAGNMAEMFRQ 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IVAIG+D L R + +GSILIE M IAG
Sbjct: 428 IVAIGADTLVRGTKETGSILIEQMTIAG 455
>gi|295677241|ref|YP_003605765.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. CCGE1002]
gi|295437084|gb|ADG16254.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. CCGE1002]
Length = 456
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 237/449 (52%), Positives = 334/449 (74%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E +++A D+L +AK +G + ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDELKEIASDILRHAKALGGTDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I + + GN+STSDF ++L DT+ AAYNIARFTA D+ AGL + LE P D
Sbjct: 72 VFIGNKR----GNASTSDFSPQALKDTVAAAYNIARFTAEDDCAGLAEAELLETAPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A IA R E+ AF + I N+E V+ Q S F+LA S GF++GYP+S
Sbjct: 128 LYHPWNLSADEAVEIARRAEDAAFATDPQIKNSEGASVSAQHSQFVLATSRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S +L PE +G YAA+R ++R+ A+ + TRK P
Sbjct: 188 RHYIACAPIAGSGRNMQRDDWYTSTRSADELADPEAVGRYAAQRALARIGARGLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + SG +LYRK++FLVDSLGK +F+ H+Q++EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQATSGGALYRKTSFLVDSLGKPVFAPHVQVVEDPHVARAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T++R VVK+G+++GYFLSTYSA+KLGMKTTGN+GG+H+L ++S+ T+ D+ +
Sbjct: 308 FDEEGVRTRQRSVVKDGVVEGYFLSTYSARKLGMKTTGNAGGSHNLSLLSSNTRPEDDFE 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENGKIQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGASGFWVENGKIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D +TR + +GS+LIE M IAG+
Sbjct: 428 IVAIGADTITRGTKQTGSVLIERMTIAGQ 456
>gi|209522088|ref|ZP_03270740.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. H160]
gi|209497478|gb|EDZ97681.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. H160]
Length = 456
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 237/449 (52%), Positives = 334/449 (74%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E +++A D+L +AK +G + ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDELKEIASDILRHAKALGGTDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I + + GN+STSDF ++L DT+ AAYNIARFTA D+ AGL + LE P D
Sbjct: 72 VFIGNKR----GNASTSDFSPQALKDTVAAAYNIARFTAEDDCAGLAEAELLETAPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A IA R E+ AF + I N+E V+ Q S F+LA S GF++GYP+S
Sbjct: 128 LYHPWNLSADEAVEIARRAEDAAFATDPQIKNSEGASVSAQHSQFVLATSRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S +L PE +G YAA+R ++R+ A+ + TRK P
Sbjct: 188 RHYIACAPIAGSGRNMQRDDWYTSTRRADELADPEAVGRYAAQRALARIGARGLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + SG +LYRK++FLVDSLGK +F+ H+Q++EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQATSGGALYRKTSFLVDSLGKPVFAPHVQVVEDPHVARAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T++R VVK+G+++GYFLSTYSA+KLGMKTTGN+GG+H+L ++S+ T+ D+ +
Sbjct: 308 FDEEGVRTRQRSVVKDGVVEGYFLSTYSARKLGMKTTGNAGGSHNLSLLSSNTRPEDDFE 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENGKIQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGASGFWVENGKIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D +TR + +GS+LIE M IAG+
Sbjct: 428 IVAIGADTITRGTKRTGSVLIERMTIAGQ 456
>gi|167563589|ref|ZP_02356505.1| pmbA protein [Burkholderia oklahomensis EO147]
gi|167570753|ref|ZP_02363627.1| pmbA protein [Burkholderia oklahomensis C6786]
Length = 456
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 235/449 (52%), Positives = 334/449 (74%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E +++A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDELKEIATDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKTVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF +L DT+ AAYNIARFTA D+ AGL + LE +P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPAALQDTVAAAYNIARFTAEDDAAGLAEAELLETDPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW +S D+A IA R E+ AF + I N+E V+ Q S F+LA S GF+ GYP+S
Sbjct: 128 LYHPWRISADEAVDIARRSEDAAFAVSPQIRNSEGASVSAQHSQFVLATSRGFLGGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H ++ +PIA G+ MQRD+WY+S +L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYVACAPIAGSGRHMQRDDWYTSKRRADELASPESVGRYAAERALARMGARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK++F+ H+QI+EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKEVFAPHVQIVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VVK+G+++GYFLSTYSA+KLG +TTGN+GG+H++ + S +T+ +D+
Sbjct: 308 FDEEGVRTRARSVVKDGVVEGYFLSTYSARKLGTQTTGNAGGSHNIALKSARTRPTDDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG+IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGEIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 428 IVAIGADSIVRGTKATGSVLIEQMTIAGQ 456
>gi|238026571|ref|YP_002910802.1| peptidase U62, modulator of DNA gyrase [Burkholderia glumae BGR1]
gi|237875765|gb|ACR28098.1| Peptidase U62, modulator of DNA gyrase [Burkholderia glumae BGR1]
Length = 456
Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/449 (53%), Positives = 329/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ + +++A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQEQLKEIASDILRHAKSLGATDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF +L DT+ AAYNIARFTA D+ AGL + LE P D
Sbjct: 72 VFI--GKKR--GNASTSDFSSSALKDTVAAAYNIARFTAEDDAAGLAEAELLETAPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A IA R E+ AF + I N+E V+ Q S F+LA S GF+ GYP+S
Sbjct: 128 LYHPWALSADEAVEIARRAEDAAFAVSPQIRNSEGASVSAQHSQFVLATSRGFLGGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H ++ +PIA G+ MQRD+WYSS + +L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYVACAPIAGSGRNMQRDDWYSSKRNAAELASPEAVGRYAAERALARMGARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + SG +LYRK+TFLVDSLGK +F+ H+Q++EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQATSGGALYRKTTFLVDSLGKPVFAPHVQVLEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+TQ R VVK+G+++GYFLSTYSA+KL +TTGN+GG+H+L + S TK+ D+
Sbjct: 308 FDEEGVRTQARSVVKDGVVEGYFLSTYSARKLKTQTTGNAGGSHNLALRSTGTKAGDDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGVIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 428 IVAIGADTIVRGTKETGSVLIEQMTIAGQ 456
>gi|170700982|ref|ZP_02891964.1| peptidase U62 modulator of DNA gyrase [Burkholderia ambifaria
IOP40-10]
gi|170134122|gb|EDT02468.1| peptidase U62 modulator of DNA gyrase [Burkholderia ambifaria
IOP40-10]
Length = 456
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 235/449 (52%), Positives = 331/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ + +++A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDQLKEIASDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF ++ DT+ AAYNIARFTA D+ AGL + LE +P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPAAIKDTVAAAYNIARFTAEDDAAGLAEAELLETDPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW L+ D+A +A R E+ AF + I N+E V+ Q S F+LA S GF++GYP+S
Sbjct: 128 LYHPWALTADEAVELARRAEDAAFAVSPQIRNSEGASVSAQHSQFVLATSRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WYSS L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYIACAPIAGSGRHMQRDDWYSSKRSAVDLAAPEAVGRYAAERALARMSARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK +F+ H+Q++EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKPVFAPHVQVVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VVK+G+++GYFLSTYSA+KLG KTTGN+GG+H+L + S+ T+ D+
Sbjct: 308 FDEEGVRTRARSVVKDGVVEGYFLSTYSARKLGTKTTGNAGGSHNLALCSSDTQPGDDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGVIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 428 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 456
>gi|107022159|ref|YP_620486.1| C69 family peptidase [Burkholderia cenocepacia AU 1054]
gi|116689104|ref|YP_834727.1| peptidase U62, modulator of DNA gyrase [Burkholderia cenocepacia
HI2424]
gi|170732392|ref|YP_001764339.1| peptidase U62 modulator of DNA gyrase [Burkholderia cenocepacia
MC0-3]
gi|254245957|ref|ZP_04939278.1| Peptidase U62 [Burkholderia cenocepacia PC184]
gi|105892348|gb|ABF75513.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Burkholderia cenocepacia AU 1054]
gi|116647193|gb|ABK07834.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Burkholderia cenocepacia HI2424]
gi|124870733|gb|EAY62449.1| Peptidase U62 [Burkholderia cenocepacia PC184]
gi|169815634|gb|ACA90217.1| peptidase U62 modulator of DNA gyrase [Burkholderia cenocepacia
MC0-3]
Length = 456
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/449 (52%), Positives = 331/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ + +++A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDQLKEIASDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF ++ DT+ AAYNIARFTA D AGL + LE +P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPAAIKDTVAAAYNIARFTAEDEAAGLAEAELLETDPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A +A R E+ AF + I N+E V+ Q S F+LA S GF++GYP+S
Sbjct: 128 LYHPWALSADEAVELARRAEDAAFAVSPQIRNSEGASVSAQHSQFVLATSRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WYSS L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYIACAPIAGSGRHMQRDDWYSSKRSAIDLAAPEAVGRYAAERALARMGARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK +F+ HIQ++EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKPVFAPHIQVVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VVK+G+++GYFLSTYSA+KLG +TTGN+GG+H+L + S+ T++ D+
Sbjct: 308 FDEEGVRTRARSVVKDGVVEGYFLSTYSARKLGTQTTGNAGGSHNLALRSSNTQAGDDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGVIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D L R + +GS+LIE M IAG+
Sbjct: 428 IVAIGADSLVRGTKETGSVLIEQMTIAGQ 456
>gi|83720370|ref|YP_442210.1| pmbA protein [Burkholderia thailandensis E264]
gi|83654195|gb|ABC38258.1| pmbA protein [Burkholderia thailandensis E264]
Length = 498
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/449 (52%), Positives = 331/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E + +A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 54 FPHTQDELKAIATDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKTVGVT 113
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF +L DT+ AAYNIARFTA D+ AGL + LE +P D
Sbjct: 114 VFI--GKKR--GNASTSDFSPAALKDTVAAAYNIARFTAEDDAAGLAEAELLETDPRDLD 169
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS DDA +A R E+ AF + I N+E V+ Q S F+LA + GF++GYP+S
Sbjct: 170 LYHPWRLSADDAVDLARRAEDAAFAVSPQIRNSEGASVSAQHSQFVLATTRGFLAGYPYS 229
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S +L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 230 RHYIACAPIAGSGRHMQRDDWYTSKRRADELASPESVGRYAAQRALARMGARRLDTRKVP 289
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK++F+ H+QI+EDPH+ + GS+
Sbjct: 290 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKEVFAPHVQIVEDPHVPRAMGSAP 349
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T R VVK+G+++GYFLSTYSA+KLG +TTGN+GG+H++ + S T +D+
Sbjct: 350 FDEEGVRTHARSVVKDGVVEGYFLSTYSARKLGTQTTGNAGGSHNIALRSALTNPADDFD 409
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG+IQY VEEIT++ LQ MF+
Sbjct: 410 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGEIQYPVEEITVASTLQEMFRH 469
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 470 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 498
>gi|167581090|ref|ZP_02373964.1| pmbA protein [Burkholderia thailandensis TXDOH]
gi|167619170|ref|ZP_02387801.1| pmbA protein [Burkholderia thailandensis Bt4]
gi|257138400|ref|ZP_05586662.1| pmbA protein [Burkholderia thailandensis E264]
Length = 456
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/449 (52%), Positives = 331/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E + +A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDELKAIATDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKTVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF +L DT+ AAYNIARFTA D+ AGL + LE +P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPAALKDTVAAAYNIARFTAEDDAAGLAEAELLETDPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS DDA +A R E+ AF + I N+E V+ Q S F+LA + GF++GYP+S
Sbjct: 128 LYHPWRLSADDAVDLARRAEDAAFAVSPQIRNSEGASVSAQHSQFVLATTRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S +L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYIACAPIAGSGRHMQRDDWYTSKRRADELASPESVGRYAAQRALARMGARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK++F+ H+QI+EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKEVFAPHVQIVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T R VVK+G+++GYFLSTYSA+KLG +TTGN+GG+H++ + S T +D+
Sbjct: 308 FDEEGVRTHARSVVKDGVVEGYFLSTYSARKLGTQTTGNAGGSHNIALRSALTNPADDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG+IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGEIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 428 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 456
>gi|115351011|ref|YP_772850.1| C69 family peptidase [Burkholderia ambifaria AMMD]
gi|172060016|ref|YP_001807668.1| peptidase U62 modulator of DNA gyrase [Burkholderia ambifaria
MC40-6]
gi|115280999|gb|ABI86516.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Burkholderia ambifaria AMMD]
gi|171992533|gb|ACB63452.1| peptidase U62 modulator of DNA gyrase [Burkholderia ambifaria
MC40-6]
Length = 456
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 235/449 (52%), Positives = 331/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ + +++A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDQLKEIASDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF ++ DT+ AAYNIARFTA D+ AGL + LE +P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPAAIKDTVAAAYNIARFTAEDDAAGLAEAELLETDPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A +A R E+ AF + I N+E V+ Q S F+LA S GF++GYP+S
Sbjct: 128 LYHPWALSADEAVELARRAEDAAFAVSPQIRNSEGASVSAQHSQFVLATSRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WYSS L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYIACAPIAGSGRHMQRDDWYSSKRSAVDLAAPEAVGRYAAERALARMGARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK +F+ H+Q++EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKPVFAPHVQVVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VVK+G+++GYFLSTYSA+KLG +TTGN+GG+H+L + S+ T+ D+
Sbjct: 308 FDEEGVRTRARSVVKDGVVEGYFLSTYSARKLGTQTTGNAGGSHNLALRSSDTQPGDDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGVIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 428 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 456
>gi|189349871|ref|YP_001945499.1| PmbA protein [Burkholderia multivorans ATCC 17616]
gi|221201296|ref|ZP_03574336.1| TldD/PmbA family protein [Burkholderia multivorans CGD2M]
gi|221206250|ref|ZP_03579263.1| TldD/PmbA family protein [Burkholderia multivorans CGD2]
gi|421473035|ref|ZP_15921185.1| TldD/PmbA family protein [Burkholderia multivorans ATCC BAA-247]
gi|421476705|ref|ZP_15924575.1| TldD/PmbA family protein [Burkholderia multivorans CF2]
gi|189333893|dbj|BAG42963.1| PmbA protein [Burkholderia multivorans ATCC 17616]
gi|221173559|gb|EEE05993.1| TldD/PmbA family protein [Burkholderia multivorans CGD2]
gi|221179146|gb|EEE11553.1| TldD/PmbA family protein [Burkholderia multivorans CGD2M]
gi|400221907|gb|EJO52330.1| TldD/PmbA family protein [Burkholderia multivorans ATCC BAA-247]
gi|400227901|gb|EJO57874.1| TldD/PmbA family protein [Burkholderia multivorans CF2]
Length = 456
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/449 (52%), Positives = 330/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ + +++A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDQLKEIASDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF ++ DT+ AAYNIARFTA D+ AGL + LE +P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPAAIKDTVAAAYNIARFTAEDDAAGLAEAELLETDPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A IA R E+ AF + I N+E V+ Q S F+LA S GF+ GYP+S
Sbjct: 128 LYHPWALSADEAVDIARRAEDAAFAVSPQIRNSEGASVSAQHSQFVLATSRGFLGGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYIACAPIAGSGRHMQRDDWYTSKRSAADLAAPEAVGRYAAERALARMGARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK +F+ H+QI+EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKPVFAPHVQIVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VVK+G+++GYFLSTYSA+KLG +TTGN+GG+H+L + S+ T+ D+
Sbjct: 308 FDEEGVRTRSRSVVKDGVVEGYFLSTYSARKLGTQTTGNAGGSHNLALRSSNTQPGDDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGVIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 428 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 456
>gi|161525392|ref|YP_001580404.1| peptidase U62 modulator of DNA gyrase [Burkholderia multivorans
ATCC 17616]
gi|160342821|gb|ABX15907.1| peptidase U62 modulator of DNA gyrase [Burkholderia multivorans
ATCC 17616]
Length = 470
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/449 (52%), Positives = 330/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ + +++A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 26 FPHTQDQLKEIASDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 85
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF ++ DT+ AAYNIARFTA D+ AGL + LE +P D
Sbjct: 86 VFI--GKKR--GNASTSDFSPAAIKDTVAAAYNIARFTAEDDAAGLAEAELLETDPRDLD 141
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A IA R E+ AF + I N+E V+ Q S F+LA S GF+ GYP+S
Sbjct: 142 LYHPWALSADEAVDIARRAEDAAFAVSPQIRNSEGASVSAQHSQFVLATSRGFLGGYPYS 201
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 202 RHYIACAPIAGSGRHMQRDDWYTSKRSAADLAAPEAVGRYAAERALARMGARRLDTRKVP 261
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK +F+ H+QI+EDPH+ + GS+
Sbjct: 262 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKPVFAPHVQIVEDPHVPRAMGSAP 321
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VVK+G+++GYFLSTYSA+KLG +TTGN+GG+H+L + S+ T+ D+
Sbjct: 322 FDEEGVRTRSRSVVKDGVVEGYFLSTYSARKLGTQTTGNAGGSHNLALRSSNTQPGDDFD 381
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG IQY VEEIT++ LQ MF+
Sbjct: 382 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGVIQYPVEEITVASTLQEMFRH 441
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 442 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 470
>gi|359798020|ref|ZP_09300598.1| modulator of DNA gyrase family protein 1 [Achromobacter
arsenitoxydans SY8]
gi|359364032|gb|EHK65751.1| modulator of DNA gyrase family protein 1 [Achromobacter
arsenitoxydans SY8]
Length = 454
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 229/443 (51%), Positives = 321/443 (72%), Gaps = 4/443 (0%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ F +L + L YA++IGAS ++ E +E G SV VRK I+ +EQ D+++++ +Y
Sbjct: 15 ARFSELVEQTLAYARQIGASDAAAEVSESLGLSVSVRKNDIETVEQTRDRSLDLTVYAGQ 74
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
+ G++STSDF + +L T+ AA++IAR TA+D AGLPD + L D L+ W
Sbjct: 75 SR----GSASTSDFSEAALRQTVEAAWHIARHTAADPAAGLPDADQLATEFPDLDLHHAW 130
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
+S ++A +A R E A + + I N + V T + F++ N+ GF+ GYP+S+H +S
Sbjct: 131 GVSTEEAAELALRAERAARDVDPRITNTDGASVGTYEGQFVMGNTRGFLGGYPYSRHSLS 190
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
++PIA +G MQRD WYSS DP KL PE IG YAA+RT+SRL A++I T K PVLFEA
Sbjct: 191 VAPIAGRGNGMQRDYWYSSERDPAKLASPEAIGRYAAERTLSRLSARRIRTGKFPVLFEA 250
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
PLA L+ + ++G +LYRK++FLVDSLGK IF HI + EDPHI G+ GSS FD+EG
Sbjct: 251 PLALGLVGALTQAVNGGALYRKASFLVDSLGKPIFPKHINLTEDPHIRGAMGSSPFDDEG 310
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T++R VV +G+++GYFLS+Y+A+KLGM TTGN+GG+H+L+ S TK D+ + MLKK
Sbjct: 311 VRTRRRNVVSDGVLEGYFLSSYTARKLGMATTGNAGGSHNLVFSSTLTKRGDDFEAMLKK 370
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TG LVTEL+G G+NY+TGDYS+GAFGYW+ENGKIQ++V+EITI+G L +MF+QIVA+G
Sbjct: 371 MGTGFLVTELIGQGVNYVTGDYSRGAFGYWVENGKIQHAVQEITIAGNLADMFQQIVAVG 430
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
+DV++R + T+GSILIE M IAG
Sbjct: 431 ADVISRGTKTTGSILIEQMAIAG 453
>gi|221213529|ref|ZP_03586503.1| TldD/PmbA family protein [Burkholderia multivorans CGD1]
gi|221166318|gb|EED98790.1| TldD/PmbA family protein [Burkholderia multivorans CGD1]
Length = 456
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/449 (52%), Positives = 330/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ + +++A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDQLKEIASDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF ++ DT+ AAYNIARFTA D+ AGL + LE +P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPAAIKDTVAAAYNIARFTAEDDAAGLAETELLETDPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A IA R E+ AF + I N+E V+ Q S F+LA S GF+ GYP+S
Sbjct: 128 LYHPWALSADEAVDIARRAEDAAFAVSPQIRNSEGASVSAQHSQFVLATSRGFLGGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYIACAPIAGSGRHMQRDDWYTSKRSAADLAAPEAVGRYAAERALARMGARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK +F+ H+QI+EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKPVFAPHVQIVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VVK+G+++GYFLSTYSA+KLG +TTGN+GG+H+L + S+ T+ D+
Sbjct: 308 FDEEGVRTRSRSVVKDGVVEGYFLSTYSARKLGTQTTGNAGGSHNLALRSSNTQPGDDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGVIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 428 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 456
>gi|254252893|ref|ZP_04946211.1| Peptidase U62 [Burkholderia dolosa AUO158]
gi|124895502|gb|EAY69382.1| Peptidase U62 [Burkholderia dolosa AUO158]
Length = 456
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 235/449 (52%), Positives = 331/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ + +++A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDQLKEIASDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF ++ DT+ AAYNIARFTA D+ AGL + LE +P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPAAIKDTVAAAYNIARFTAEDDAAGLAEAELLETDPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW L+ D+A IA R E+ AF + I N+E V+ Q S F+LA S GF++GYP+S
Sbjct: 128 LYHPWALTADEAVEIARRAEDAAFAVSPQIRNSEGASVSAQHSQFVLATSRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H ++ +PIA G+ MQRD+WYSS L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYVACAPIAGSGRHMQRDDWYSSKRSAVDLAAPEAVGRYAAERALARMGARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK +F+ H+QI+EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKPVFAPHVQIVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VVK+GI++GYFLSTYSA+KLG +TTGN+GG+H+L + S+ T+ D+
Sbjct: 308 FDEEGVRTRARNVVKDGIVEGYFLSTYSARKLGTQTTGNAGGSHNLALRSSNTQPGDDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGVIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVA+G+D + R + +GS+LIE M IAG+
Sbjct: 428 IVAVGADTIVRGTKETGSVLIEQMTIAGQ 456
>gi|206561251|ref|YP_002232016.1| microcin-processing peptidase [Burkholderia cenocepacia J2315]
gi|421867183|ref|ZP_16298842.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Burkholderia cenocepacia H111]
gi|444371184|ref|ZP_21170759.1| TldD/PmbA family protein [Burkholderia cenocepacia K56-2Valvano]
gi|198037293|emb|CAR53215.1| microcin-processing peptidase [Burkholderia cenocepacia J2315]
gi|358072597|emb|CCE49720.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Burkholderia cenocepacia H111]
gi|443595876|gb|ELT64423.1| TldD/PmbA family protein [Burkholderia cenocepacia K56-2Valvano]
Length = 456
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 235/449 (52%), Positives = 331/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ + +++A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDQLKEIASDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF ++ DT+ AAYNIARFTA D AGL + LE +P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPAAIKDTVAAAYNIARFTAEDEAAGLAETELLETDPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A +A R E+ AF + I N+E V+ Q S F+LA S GF++GYP+S
Sbjct: 128 LYHPWALSADEAVELARRAEDAAFAVSPQIRNSEGASVSAQHSQFVLATSRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WYSS L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYIACAPIAGSGRHMQRDDWYSSKRSAIDLAAPEAVGRYAAERALARMGARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK +F+ H+Q++EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKPVFAPHVQVVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VVK+G+++GYFLSTYSA+KLG +TTGN+GG+H+L + S+ T++ D+
Sbjct: 308 FDEEGVRTRARSVVKDGVVEGYFLSTYSARKLGTQTTGNAGGSHNLALRSSNTQAGDDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGVIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 428 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 456
>gi|78065667|ref|YP_368436.1| microcin-processing peptidase 1 [Burkholderia sp. 383]
gi|77966412|gb|ABB07792.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Burkholderia sp. 383]
Length = 456
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/449 (52%), Positives = 331/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ + +++A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDQLKEIASDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF ++ DT+ AAYNIARFTA D AGL + LE +P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPGAIKDTVAAAYNIARFTAEDEAAGLAEAELLETDPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW L+ D+A +A R E+ AF + I N+E V+ Q S F+LA S GF+SGYP+S
Sbjct: 128 LYHPWALTADEAVELARRAEDAAFAVSPQIRNSEGASVSAQHSQFVLATSRGFLSGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WYSS L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYIACAPIAGSGRHMQRDDWYSSKRSAIDLAAPEAVGRYAAERALARMGARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK +F+ HIQ++EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKPVFAPHIQVVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VVK+G+++GYFLSTYSA+KLG +TTGN+GG+H+L + S+ T++ D+
Sbjct: 308 FDEEGVRTRARSVVKDGVVEGYFLSTYSARKLGTQTTGNAGGSHNLALRSSNTQAGDDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGVIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 428 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 456
>gi|387901732|ref|YP_006332071.1| TldE/PmbA protein [Burkholderia sp. KJ006]
gi|387576624|gb|AFJ85340.1| TldE/PmbA protein [Burkholderia sp. KJ006]
Length = 456
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 234/449 (52%), Positives = 331/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ + +++A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDQLKEIASDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF ++ DT+ AAYNIARFTA D+ AGL + LE +P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPAAIKDTVAAAYNIARFTAEDDAAGLAEAELLETDPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW L+ D+A +A R E+ AF + I N+E V+ Q S F+LA S GF++GYP+S
Sbjct: 128 LYHPWALTADEAVELARRAEDAAFAVSPQIRNSEGASVSAQHSQFVLATSRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYIACAPIAGSGRHMQRDDWYTSKRSAVDLAAPEAVGRYAAERALARMGARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK +F+ H+Q++EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKPVFAPHVQVVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VVK+G+++GYFLSTYSA+KLG +TTGN+GG+H+L + S+ T+ D+
Sbjct: 308 FDEEGVRTRARSVVKDGVVEGYFLSTYSARKLGTQTTGNAGGSHNLALRSSNTQPGDDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGVIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D L R + +GS+LIE M IAG+
Sbjct: 428 IVAIGADSLVRGTKETGSVLIEQMTIAGQ 456
>gi|134295112|ref|YP_001118847.1| microcin-processing peptidase 1 [Burkholderia vietnamiensis G4]
gi|134138269|gb|ABO54012.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Burkholderia vietnamiensis G4]
Length = 456
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 234/449 (52%), Positives = 331/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ + +++A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDQLKEIASDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF ++ DT+ AAYNIARFTA D+ AGL + LE +P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPAAIKDTVAAAYNIARFTAEDDAAGLAEAELLETDPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW L+ D+A +A R E+ AF + I N+E V+ Q S F+LA S GF++GYP+S
Sbjct: 128 LYHPWALTADEAVGLARRAEDAAFAVSPQIRNSEGASVSAQHSQFVLATSRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYIACAPIAGSGRHMQRDDWYTSKRSAVDLAAPEAVGRYAAERALARMGARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK +F+ H+Q++EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKPVFAPHVQVVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VVK+G+++GYFLSTYSA+KLG +TTGN+GG+H+L + S+ T+ D+
Sbjct: 308 FDEEGVRTRARSVVKDGVVEGYFLSTYSARKLGTQTTGNAGGSHNLALRSSNTQPGDDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGVIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D L R + +GS+LIE M IAG+
Sbjct: 428 IVAIGADSLVRGTKETGSVLIEQMTIAGQ 456
>gi|171317120|ref|ZP_02906322.1| peptidase U62 modulator of DNA gyrase [Burkholderia ambifaria
MEX-5]
gi|171097687|gb|EDT42517.1| peptidase U62 modulator of DNA gyrase [Burkholderia ambifaria
MEX-5]
Length = 456
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 234/449 (52%), Positives = 331/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ + +++A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDQLKEIASDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF ++ DT+ AAYNIARFTA D+ AGL + LE +P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPAAIKDTVAAAYNIARFTAEDDAAGLAEAELLETDPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW L+ D+A +A R E+ AF + I N+E V+ Q S F+LA S GF++GYP+S
Sbjct: 128 LYHPWALTADEAVELARRAEDAAFAVSPQIRNSEGASVSAQHSQFVLATSRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WYSS L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYIACAPIAGSGRHMQRDDWYSSKRSAVDLAAPEAVGRYAAERALARMGARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK +F+ H+Q++EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKPVFAPHVQVVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VVK+G+++GYFLSTYSA+KLG +TTGN+GG+H+L + S+ T+ D+
Sbjct: 308 FDEEGVRTRARSVVKDGVVEGYFLSTYSARKLGTQTTGNAGGSHNLALRSSDTQPGDDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGVIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 428 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 456
>gi|254195639|ref|ZP_04902066.1| TldD/PmbA family protein [Burkholderia pseudomallei S13]
gi|169652385|gb|EDS85078.1| TldD/PmbA family protein [Burkholderia pseudomallei S13]
Length = 508
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/449 (52%), Positives = 330/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E + +A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 64 FPHTQDELKAIATDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKTVGVT 123
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF +L DT+ AAYNIARFTA D+ AGL + LE P D
Sbjct: 124 VFI--GKKR--GNASTSDFSPTALKDTVAAAYNIARFTAEDDAAGLAEAELLETEPRDLD 179
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A +A R E+ AF + I N+E V+ Q S F+LA + GF++GYP+S
Sbjct: 180 LYHPWRLSADEAVDLARRSEDAAFAVSPQIRNSEGASVSAQHSQFVLATTRGFLAGYPYS 239
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S +L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 240 RHYIACAPIAGSGRHMQRDDWYTSKRRADELASPESVGRYAAQRALARMGARRLDTRKVP 299
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK++F+ H+QI+EDPH+ + GS+
Sbjct: 300 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKEVFAPHVQIVEDPHVPRAMGSAP 359
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VV++G+++GYFLSTYSA+KLG +TTGN+GG+H++ + S T D+
Sbjct: 360 FDEEGVRTRARSVVRDGVVEGYFLSTYSARKLGTQTTGNAGGSHNIALRSALTAPGDDFD 419
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG+IQY VEEIT++ LQ MF+
Sbjct: 420 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGEIQYPVEEITVASTLQEMFRH 479
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 480 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 508
>gi|403519573|ref|YP_006653707.1| TldD/PmbA family protein [Burkholderia pseudomallei BPC006]
gi|403075216|gb|AFR16796.1| TldD/PmbA family protein [Burkholderia pseudomallei BPC006]
Length = 508
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/449 (52%), Positives = 330/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E + +A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 64 FPHTQDELKAIATDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKTVGVT 123
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF +L DT+ AAYNIARFTA D+ AGL + LE P D
Sbjct: 124 VFI--GKKR--GNASTSDFSPTALKDTVAAAYNIARFTAEDDAAGLAEAELLETEPRDLD 179
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A +A R E+ AF + I N+E V+ Q S F+LA + GF++GYP+S
Sbjct: 180 LYHPWRLSADEAVDLARRSEDAAFAVSPQIRNSEGASVSAQHSQFVLATTRGFLAGYPYS 239
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S +L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 240 RHYIACAPIAGSGRHMQRDDWYTSKRRADELASPESVGRYAAQRALARMGARRLDTRKVP 299
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK++F+ H+QI+EDPH+ + GS+
Sbjct: 300 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKEVFAPHVQIVEDPHVPRAMGSAP 359
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VV++G+++GYFLSTYSA+KLG +TTGN+GG+H++ + S T D+
Sbjct: 360 FDEEGVRTRARNVVRDGVVEGYFLSTYSARKLGTQTTGNAGGSHNIALRSALTAPGDDFD 419
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG+IQY VEEIT++ LQ MF+
Sbjct: 420 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGEIQYPVEEITVASTLQEMFRH 479
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 480 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 508
>gi|167837410|ref|ZP_02464293.1| pmbA protein [Burkholderia thailandensis MSMB43]
gi|424903391|ref|ZP_18326904.1| hypothetical protein A33K_14765 [Burkholderia thailandensis MSMB43]
gi|390931264|gb|EIP88665.1| hypothetical protein A33K_14765 [Burkholderia thailandensis MSMB43]
Length = 456
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/449 (52%), Positives = 331/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E + +A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDELKAIATDILRHAKTLGATDAATEISEGDGLSVSVRRGEVETIEHNRDKTVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF +L DT+ AAYNIARFTA D+ AGL + LE P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPAALKDTVAAAYNIARFTAEDDAAGLAEAELLETEPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A +A R E+ AF + I N+E V+ Q S F+LA + GF++GYP+S
Sbjct: 128 LYHPWRLSADEAVDLARRAEDAAFAVSPQIRNSEGASVSAQHSQFVLATTRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S +L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYIACAPIAGAGRHMQRDDWYTSKRRADELASPESVGRYAAQRALARMGARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK++F+ H+QI+EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKEVFAPHVQIVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VV++G+++GYFLSTYSA+KLG +TTGN+GG+H++ + S T +D+
Sbjct: 308 FDEEGVRTRARNVVRDGVVEGYFLSTYSARKLGTQTTGNAGGSHNIALRSALTTPADDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG+IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGEIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 428 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 456
>gi|254295660|ref|ZP_04963118.1| TldD/PmbA family protein [Burkholderia pseudomallei 406e]
gi|157805559|gb|EDO82729.1| TldD/PmbA family protein [Burkholderia pseudomallei 406e]
Length = 468
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/449 (52%), Positives = 330/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E + +A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 24 FPHTQDELKAIATDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKTVGVT 83
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF +L DT+ AAYNIARFTA D+ AGL + LE P D
Sbjct: 84 VFI--GKKR--GNASTSDFSPTALKDTVAAAYNIARFTAEDDAAGLAEAELLETEPRDLD 139
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A +A R E+ AF + I N+E V+ Q S F+LA + GF++GYP+S
Sbjct: 140 LYHPWRLSADEAVDLARRSEDAAFAVSPQIRNSEGASVSAQHSQFVLATTRGFLAGYPYS 199
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S +L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 200 RHYIACAPIAGSGRHMQRDDWYTSKRRADELASPESVGRYAAQRALARMGARRLDTRKVP 259
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK++F+ H+QI+EDPH+ + GS+
Sbjct: 260 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKEVFAPHVQIVEDPHVPRAMGSAP 319
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VV++G+++GYFLSTYSA+KLG +TTGN+GG+H++ + S T D+
Sbjct: 320 FDEEGVRTRARNVVRDGVVEGYFLSTYSARKLGTQTTGNAGGSHNIALRSALTAPGDDFD 379
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG+IQY VEEIT++ LQ MF+
Sbjct: 380 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGEIQYPVEEITVASTLQEMFRH 439
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 440 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 468
>gi|167739614|ref|ZP_02412388.1| TldD/PmbA family protein [Burkholderia pseudomallei 14]
Length = 456
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/449 (52%), Positives = 330/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E + +A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDELKAIATDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKTVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF +L DT+ AAYNIARFTA D+ AGL + LE P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPTALKDTVAAAYNIARFTAEDDAAGLAEAELLETEPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A +A R E+ AF + I N+E V+ Q S F+LA + GF++GYP+S
Sbjct: 128 LYHPWRLSADEAVDLARRSEDAAFAVSPQIRNSEGASVSAQHSQFVLATTRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S +L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYIACAPIAGSGRHMQRDDWYTSKRRADELASPESVGRYAAQRALARMGARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK++F+ H+QI+EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKEVFAPHVQIVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VV++G+++GYFLSTYSA+KLG +TTGN+GG+H++ + S T D+
Sbjct: 308 FDEEGVRTRARSVVRDGVVEGYFLSTYSARKLGTQTTGNAGGSHNIALRSALTAPGDDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG+IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGEIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 428 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 456
>gi|126439239|ref|YP_001059863.1| TldD/PmbA family protein [Burkholderia pseudomallei 668]
gi|126218732|gb|ABN82238.1| TldD/PmbA family protein [Burkholderia pseudomallei 668]
Length = 456
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/449 (52%), Positives = 330/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E + +A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDELKAIATDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKTVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF +L DT+ AAYNIARFTA D+ AGL + LE P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPTALKDTVAAAYNIARFTAEDDAAGLAEAELLETEPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A +A R E+ AF + I N+E V+ Q S F+LA + GF++GYP+S
Sbjct: 128 LYHPWRLSADEAVDLARRSEDAAFAVSPQIRNSEGASVSAQHSQFVLATTRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S +L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYIACAPIAGSGRHMQRDDWYTSKRRADELASPESVGRYAAQRALARMGARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK++F+ H+QI+EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKEVFAPHVQIVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VV++G+++GYFLSTYSA+KLG +TTGN+GG+H++ + S T D+
Sbjct: 308 FDEEGVRTRARSVVRDGVVEGYFLSTYSARKLGAQTTGNAGGSHNIALRSALTAPGDDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG+IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGEIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 428 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 456
>gi|254191992|ref|ZP_04898492.1| TldD/PmbA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|157987814|gb|EDO95579.1| TldD/PmbA family protein [Burkholderia pseudomallei Pasteur 52237]
Length = 508
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/449 (52%), Positives = 330/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E + +A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 64 FPHTQDELKAIATDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKTVGVT 123
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF +L DT+ AAYNIARFTA D+ AGL + LE P D
Sbjct: 124 VFI--GKKR--GNASTSDFSPTALKDTVAAAYNIARFTAEDDAAGLAEAELLETEPRDLD 179
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A +A R E+ AF + I N+E V+ Q S F+LA + GF++GYP+S
Sbjct: 180 LYHPWRLSADEAVDLARRSEDAAFAVSPQIRNSEGASVSAQHSQFVLATTRGFLAGYPYS 239
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S +L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 240 RHYIACAPIAGSGRHMQRDDWYTSKRRADELASPESVGRYAAQRALARMGARRLDTRKVP 299
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK++F+ H+QI+EDPH+ + GS+
Sbjct: 300 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKEVFAPHVQIVEDPHVPRAMGSAP 359
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VV++G+++GYFLSTYSA+KLG +TTGN+GG+H++ + S T D+
Sbjct: 360 FDEEGVRTRARNVVRDGVVEGYFLSTYSARKLGTQTTGNAGGSHNIALRSALTAPGDDFD 419
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG+IQY VEEIT++ LQ MF+
Sbjct: 420 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGEIQYPVEEITVASTLQEMFRH 479
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 480 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 508
>gi|402567195|ref|YP_006616540.1| peptidase U62 modulator of DNA gyrase [Burkholderia cepacia GG4]
gi|402248392|gb|AFQ48846.1| peptidase U62 modulator of DNA gyrase [Burkholderia cepacia GG4]
Length = 456
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/449 (52%), Positives = 330/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ + +++A D+L +AK +GAS ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDQLKEIASDILRHAKALGASDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF ++ DT+ AAYNIARFTA D+ AGL + LE +P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPAAIKDTVAAAYNIARFTAEDDAAGLAEAELLETDPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW L+ D+A +A R E+ AF + I N+E V+ Q S F+LA S GF++GYP+S
Sbjct: 128 LYHPWALTADEAVELARRAEDAAFAVSPQIRNSEGASVSAQHSQFVLATSRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WYSS L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYIACAPIAGSGRHMQRDDWYSSKRSAVDLAAPEAVGRYAAERALARMGARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK +F+ H+Q++EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKPVFAPHVQVVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VV +G+++GYFLSTYSA+KLG +TTGN+GG+H+L + S+ T+ D+
Sbjct: 308 FDEEGVRTRARSVVNDGVVEGYFLSTYSARKLGTQTTGNAGGSHNLALRSSNTQPGDDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGVIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 428 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 456
>gi|330815932|ref|YP_004359637.1| Peptidase U62, modulator of DNA gyrase [Burkholderia gladioli BSR3]
gi|327368325|gb|AEA59681.1| Peptidase U62, modulator of DNA gyrase [Burkholderia gladioli BSR3]
Length = 456
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/449 (52%), Positives = 327/449 (72%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ + +++A D+L +AK +GAS ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQEQLKEIASDILRHAKALGASDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF +L DT+ AAYNIARFTA D AGL + LE P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPAALKDTVAAAYNIARFTAEDEAAGLAEAELLETEPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A IA R E+ AF + I N+E V+ Q S F+LA S GF++GYP+S
Sbjct: 128 LYHPWALSADEAVEIARRSEDAAFAVSPQIRNSEGASVSAQHSQFVLATSRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H ++ +PIA G+ MQRD+WYSS + L PE +G YAA+R ++R+ ++++ TRK P
Sbjct: 188 RHYVACAPIAGSGRHMQRDDWYSSKRNADDLAAPEAVGRYAAERALARMGSRRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + SG +LYRK++FLVD LGK +F+ H+Q++EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQATSGGALYRKTSFLVDCLGKPVFAPHVQVVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VVK+G+++GYFLSTYSA+KLG +TTGN+GG+H+L + S T++ D+
Sbjct: 308 FDEEGVRTRARSVVKDGVVEGYFLSTYSARKLGTQTTGNAGGSHNLALRSTNTRAGDDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGVIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + GS+LIE M IAG+
Sbjct: 428 IVAIGADTIVRGTKEIGSVLIEQMTIAGQ 456
>gi|53720087|ref|YP_109073.1| microcin-processing peptidase [Burkholderia pseudomallei K96243]
gi|134277588|ref|ZP_01764303.1| TldD/PmbA family protein [Burkholderia pseudomallei 305]
gi|167816816|ref|ZP_02448496.1| microcin-processing peptidase [Burkholderia pseudomallei 91]
gi|167895308|ref|ZP_02482710.1| microcin-processing peptidase [Burkholderia pseudomallei 7894]
gi|167903694|ref|ZP_02490899.1| microcin-processing peptidase [Burkholderia pseudomallei NCTC
13177]
gi|167919935|ref|ZP_02507026.1| microcin-processing peptidase [Burkholderia pseudomallei BCC215]
gi|237813257|ref|YP_002897708.1| TldD/PmbA family protein [Burkholderia pseudomallei MSHR346]
gi|254181126|ref|ZP_04887724.1| TldD/PmbA family protein [Burkholderia pseudomallei 1655]
gi|386860939|ref|YP_006273888.1| pmbA protein [Burkholderia pseudomallei 1026b]
gi|418380341|ref|ZP_12966320.1| pmbA protein [Burkholderia pseudomallei 354a]
gi|418533410|ref|ZP_13099277.1| pmbA protein [Burkholderia pseudomallei 1026a]
gi|418552691|ref|ZP_13117543.1| pmbA protein [Burkholderia pseudomallei 354e]
gi|52210501|emb|CAH36484.1| microcin-processing peptidase [Burkholderia pseudomallei K96243]
gi|134251238|gb|EBA51317.1| TldD/PmbA family protein [Burkholderia pseudomallei 305]
gi|184211665|gb|EDU08708.1| TldD/PmbA family protein [Burkholderia pseudomallei 1655]
gi|237506050|gb|ACQ98368.1| TldD/PmbA family protein [Burkholderia pseudomallei MSHR346]
gi|385361445|gb|EIF67330.1| pmbA protein [Burkholderia pseudomallei 1026a]
gi|385372707|gb|EIF77806.1| pmbA protein [Burkholderia pseudomallei 354e]
gi|385377463|gb|EIF82039.1| pmbA protein [Burkholderia pseudomallei 354a]
gi|385658067|gb|AFI65490.1| pmbA protein [Burkholderia pseudomallei 1026b]
Length = 456
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/449 (52%), Positives = 330/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E + +A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDELKAIATDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKTVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF +L DT+ AAYNIARFTA D+ AGL + LE P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPTALKDTVAAAYNIARFTAEDDAAGLAEAELLETEPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A +A R E+ AF + I N+E V+ Q S F+LA + GF++GYP+S
Sbjct: 128 LYHPWRLSADEAVDLARRSEDAAFAVSPQIRNSEGASVSAQHSQFVLATTRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S +L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYIACAPIAGSGRHMQRDDWYTSKRRADELASPESVGRYAAQRALARMGARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK++F+ H+QI+EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKEVFAPHVQIVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VV++G+++GYFLSTYSA+KLG +TTGN+GG+H++ + S T D+
Sbjct: 308 FDEEGVRTRARSVVRDGVVEGYFLSTYSARKLGTQTTGNAGGSHNIALRSALTAPGDDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG+IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGEIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 428 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 456
>gi|444362063|ref|ZP_21162629.1| TldD/PmbA family protein [Burkholderia cenocepacia BC7]
gi|443597528|gb|ELT65949.1| TldD/PmbA family protein [Burkholderia cenocepacia BC7]
Length = 456
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/449 (52%), Positives = 330/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ + +++A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDQLKEIASDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF ++ DT+ AAYNIARFT D AGL + LE +P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPAAIKDTVAAAYNIARFTVEDEAAGLAETELLETDPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A +A R E+ AF + I N+E V+ Q S F+LA S GF++GYP+S
Sbjct: 128 LYHPWALSADEAVELARRAEDAAFAVSPQIRNSEGASVSAQHSQFVLATSRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WYSS L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYIACAPIAGSGRHMQRDDWYSSKRSAIDLAAPEAVGRYAAERALARMGARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK +F+ H+Q++EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKPVFAPHVQVVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VVK+G+++GYFLSTYSA+KLG +TTGN+GG+H+L + S+ T++ D+
Sbjct: 308 FDEEGVRTRARSVVKDGVVEGYFLSTYSARKLGTQTTGNAGGSHNLALRSSNTQAGDDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGVIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 428 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 456
>gi|126454642|ref|YP_001067149.1| TldD/PmbA family protein [Burkholderia pseudomallei 1106a]
gi|167846722|ref|ZP_02472230.1| TldD/PmbA family protein [Burkholderia pseudomallei B7210]
gi|167911944|ref|ZP_02499035.1| TldD/PmbA family protein [Burkholderia pseudomallei 112]
gi|217420947|ref|ZP_03452452.1| TldD/PmbA family protein [Burkholderia pseudomallei 576]
gi|242316785|ref|ZP_04815801.1| TldD/PmbA family protein [Burkholderia pseudomallei 1106b]
gi|418540200|ref|ZP_13105761.1| pmbA protein [Burkholderia pseudomallei 1258a]
gi|418546448|ref|ZP_13111667.1| pmbA protein [Burkholderia pseudomallei 1258b]
gi|126228284|gb|ABN91824.1| TldD/PmbA family protein [Burkholderia pseudomallei 1106a]
gi|217396359|gb|EEC36376.1| TldD/PmbA family protein [Burkholderia pseudomallei 576]
gi|242140024|gb|EES26426.1| TldD/PmbA family protein [Burkholderia pseudomallei 1106b]
gi|385362455|gb|EIF68268.1| pmbA protein [Burkholderia pseudomallei 1258a]
gi|385364750|gb|EIF70458.1| pmbA protein [Burkholderia pseudomallei 1258b]
Length = 456
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/449 (52%), Positives = 330/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E + +A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDELKAIATDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKTVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF +L DT+ AAYNIARFTA D+ AGL + LE P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPTALKDTVAAAYNIARFTAEDDAAGLAEAELLETEPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A +A R E+ AF + I N+E V+ Q S F+LA + GF++GYP+S
Sbjct: 128 LYHPWRLSADEAVDLARRSEDAAFAVSPQIRNSEGASVSAQHSQFVLATTRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S +L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYIACAPIAGSGRHMQRDDWYTSKRRADELASPESVGRYAAQRALARMGARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK++F+ H+QI+EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKEVFAPHVQIVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VV++G+++GYFLSTYSA+KLG +TTGN+GG+H++ + S T D+
Sbjct: 308 FDEEGVRTRARNVVRDGVVEGYFLSTYSARKLGTQTTGNAGGSHNIALRSALTAPGDDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG+IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGEIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 428 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 456
>gi|53724750|ref|YP_102204.1| pmbA protein [Burkholderia mallei ATCC 23344]
gi|67642876|ref|ZP_00441627.1| TldD/PmbA family protein [Burkholderia mallei GB8 horse 4]
gi|76811554|ref|YP_334333.1| pmbA protein [Burkholderia pseudomallei 1710b]
gi|121601110|ref|YP_993834.1| pmbA protein [Burkholderia mallei SAVP1]
gi|124386135|ref|YP_001026895.1| pmbA protein [Burkholderia mallei NCTC 10229]
gi|126451353|ref|YP_001079817.1| pmbA protein [Burkholderia mallei NCTC 10247]
gi|166999776|ref|ZP_02265610.1| TldD/PmbA family protein [Burkholderia mallei PRL-20]
gi|167720625|ref|ZP_02403861.1| pmbA protein [Burkholderia pseudomallei DM98]
gi|254176694|ref|ZP_04883351.1| pmbA protein [Burkholderia mallei ATCC 10399]
gi|254203889|ref|ZP_04910249.1| TldD/PmbA family protein [Burkholderia mallei FMH]
gi|254208869|ref|ZP_04915217.1| TldD/PmbA family protein [Burkholderia mallei JHU]
gi|254260274|ref|ZP_04951328.1| TldD/PmbA family protein [Burkholderia pseudomallei 1710a]
gi|254360075|ref|ZP_04976345.1| TldD/PmbA family protein [Burkholderia mallei 2002721280]
gi|52428173|gb|AAU48766.1| pmbA protein [Burkholderia mallei ATCC 23344]
gi|76581007|gb|ABA50482.1| pmbA protein [Burkholderia pseudomallei 1710b]
gi|121229920|gb|ABM52438.1| pmbA protein [Burkholderia mallei SAVP1]
gi|124294155|gb|ABN03424.1| pmbA protein [Burkholderia mallei NCTC 10229]
gi|126244223|gb|ABO07316.1| pmbA protein [Burkholderia mallei NCTC 10247]
gi|147745401|gb|EDK52481.1| TldD/PmbA family protein [Burkholderia mallei FMH]
gi|147750745|gb|EDK57814.1| TldD/PmbA family protein [Burkholderia mallei JHU]
gi|148029315|gb|EDK87220.1| TldD/PmbA family protein [Burkholderia mallei 2002721280]
gi|160697735|gb|EDP87705.1| pmbA protein [Burkholderia mallei ATCC 10399]
gi|238524090|gb|EEP87525.1| TldD/PmbA family protein [Burkholderia mallei GB8 horse 4]
gi|243064264|gb|EES46450.1| TldD/PmbA family protein [Burkholderia mallei PRL-20]
gi|254218963|gb|EET08347.1| TldD/PmbA family protein [Burkholderia pseudomallei 1710a]
Length = 456
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/449 (52%), Positives = 330/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E + +A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDELKAIATDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKTVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF +L DT+ AAYNIARFTA D+ AGL + LE P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPTALKDTVAAAYNIARFTAEDDAAGLAEAELLETEPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A +A R E+ AF + I N+E V+ Q S F+LA + GF++GYP+S
Sbjct: 128 LYHPWRLSADEAVDLARRSEDAAFAVSPQIRNSEGASVSAQHSQFVLATTRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S +L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYIACAPIAGSGRHMQRDDWYTSKRRADELASPESVGRYAAQRALARMGARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FLVDSLGK++F+ H+QI+EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKEVFAPHVQIVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VV++G+++GYFLSTYSA+KLG +TTGN+GG+H++ + S T D+
Sbjct: 308 FDEEGVRTRARNVVRDGVVEGYFLSTYSARKLGTQTTGNAGGSHNIALRSALTAPGDDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG+IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGEIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 428 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 456
>gi|167825221|ref|ZP_02456692.1| pmbA protein [Burkholderia pseudomallei 9]
gi|226197849|ref|ZP_03793423.1| TldD/PmbA family protein [Burkholderia pseudomallei Pakistan 9]
gi|225930037|gb|EEH26050.1| TldD/PmbA family protein [Burkholderia pseudomallei Pakistan 9]
Length = 456
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 233/449 (51%), Positives = 330/449 (73%), Gaps = 4/449 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E + +A D+L +AK +GA+ ++ E +EG+G SV VR+G+++ IE N DK + V
Sbjct: 12 FPHTQDELKAIATDILRHAKALGATDAATEISEGDGLSVSVRRGEVETIEHNRDKTVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF +L DT+ AAYNIARFTA D+ AGL + LE P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPTALKDTVAAAYNIARFTAEDDAAGLAEAELLETEPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS D+A +A R E+ AF + I N+E V+ Q S F+LA + GF++GYP+S
Sbjct: 128 LYHPWRLSADEAVDLARRSEDAAFAVSPQIRNSEGASVSAQHSQFVLATTRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H I+ +PIA G+ MQRD+WY+S +L PE +G YAA+R ++R+ A+++ TRK P
Sbjct: 188 RHYIACAPIAGSGRHMQRDDWYTSKRRADELASPESVGRYAAQRALARMGARRLDTRKVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYRK++FL+DSLGK++F+ H+QI+EDPH+ + GS+
Sbjct: 248 VLFEAPLAAGLLGAFVQAVSGGALYRKTSFLIDSLGKEVFAPHVQIVEDPHVPRAMGSAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VV++G+++GYFLSTYSA+KLG +TTGN+GG+H++ + S T D+
Sbjct: 308 FDEEGVRTRARNVVRDGVVEGYFLSTYSARKLGTQTTGNAGGSHNIALRSALTAPGDDFD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG+IQY VEEIT++ LQ MF+
Sbjct: 368 AMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGEIQYPVEEITVASTLQEMFRH 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 428 IVAIGADSIVRGTKETGSVLIEQMTIAGQ 456
>gi|311103874|ref|YP_003976727.1| modulator of DNA gyrase family protein 1 [Achromobacter
xylosoxidans A8]
gi|310758563|gb|ADP14012.1| modulator of DNA gyrase family protein 1 [Achromobacter
xylosoxidans A8]
Length = 454
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 226/443 (51%), Positives = 319/443 (72%), Gaps = 4/443 (0%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ F +L + L YA++IGAS ++ E +E G SV VRK I+ +EQ D+++++ +Y
Sbjct: 15 ARFSELVEQTLAYARQIGASDAAAEVSESLGLSVSVRKNDIETVEQTRDRSLDLTVYAGQ 74
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
+ G++STSDF + +L T+ AA++IAR TA+D AGLPD + L D L+ W
Sbjct: 75 SR----GSASTSDFSEAALRQTVEAAWHIARHTAADPAAGLPDADQLATEFPDLDLHRAW 130
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
+S ++A +A R E A ++ I N + V T + F++ N+ GF+ GYP+S+H +S
Sbjct: 131 SVSTEEAAELALRAERAAREVDARITNTDGATVGTYEGQFVMGNTRGFLGGYPYSRHSLS 190
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
++PIA +G MQRD WYSS DP KL PE IG YAA+RT+SRL A++I T K PVLFEA
Sbjct: 191 VAPIAGRGNGMQRDYWYSSERDPAKLASPEAIGRYAAERTLSRLSARRIRTGKFPVLFEA 250
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
PLA L+ + +G +LYRK++FL+D+LGK IF HI + EDPHI G+ GSS FD+EG
Sbjct: 251 PLALGLVGALTQAANGGALYRKASFLLDALGKPIFPDHINLTEDPHIRGAMGSSPFDDEG 310
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T++R VV G+++GYFLS+Y+A+KLGM TTGN+GG+H+L+ S +T+ D+ + MLKK
Sbjct: 311 VRTRRRNVVSAGVLEGYFLSSYTARKLGMVTTGNAGGSHNLVFSSTRTRRGDDFEAMLKK 370
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TG LVTEL+G G+NY+TGDYS+GAFGYW+ENG+IQ++V+EITI+G L +MFKQIVAIG
Sbjct: 371 MGTGFLVTELIGQGVNYVTGDYSRGAFGYWVENGQIQHAVQEITIAGNLADMFKQIVAIG 430
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
+D ++R + T+GSILIE M IAG
Sbjct: 431 ADTISRGTKTTGSILIEQMAIAG 453
>gi|421485743|ref|ZP_15933298.1| modulator of DNA gyrase family protein 1 [Achromobacter piechaudii
HLE]
gi|400196055|gb|EJO29036.1| modulator of DNA gyrase family protein 1 [Achromobacter piechaudii
HLE]
Length = 454
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 226/443 (51%), Positives = 319/443 (72%), Gaps = 4/443 (0%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ F +L + L YA++IGAS ++ E +E G SV VRK I+ +EQ D+++++ +Y
Sbjct: 15 ARFSELVEQTLAYARQIGASDAAAEVSESLGLSVSVRKNDIETVEQTRDRSLDLTVYAGQ 74
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
+ G++STSDF + +L T+ AA++IAR TA+D AGLPD + L D L+ W
Sbjct: 75 SR----GSASTSDFSEAALRQTVEAAWHIARHTAADPAAGLPDADQLATEFPDLDLHRAW 130
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
+S ++A +A R E A + ++ I N + V T + F++ N+ GF+ GYP+S+H +S
Sbjct: 131 SVSTEEAAELALRAERAARDVDARITNTDGATVGTYEGQFVMGNTRGFLGGYPYSRHSLS 190
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
++PIA +G MQRD WY+S DP KL PE IG YAA+RT+SRL A++I T K PVLFEA
Sbjct: 191 VAPIAGRGNGMQRDYWYTSERDPAKLASPEAIGRYAAERTLSRLSARRIRTGKFPVLFEA 250
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
PLA L+ + ++G +LYRK++FLVDSLGK IF HI + EDPHI G GSS FD+EG
Sbjct: 251 PLALGLVGALTQAVNGGALYRKASFLVDSLGKPIFPKHINLTEDPHIRGGMGSSPFDDEG 310
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T++R VV G+++GYFLS+Y+A+KLGM TTGN+GG+H+L+ S TK D+ + MLKK
Sbjct: 311 VRTRRRNVVSAGVLEGYFLSSYTARKLGMATTGNAGGSHNLVFSSTLTKRGDDFEAMLKK 370
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
+ TG LVTEL+G G+NY+TGDYS+GAFGYW+ENGKIQ++V+EITI+G L +MF+QIVA+G
Sbjct: 371 LGTGFLVTELIGQGVNYVTGDYSRGAFGYWVENGKIQHAVQEITIAGNLADMFQQIVAVG 430
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
+D ++R + T+GSILIE M IAG
Sbjct: 431 ADTISRGTKTTGSILIEQMAIAG 453
>gi|187479443|ref|YP_787468.1| protease [Bordetella avium 197N]
gi|115424030|emb|CAJ50583.1| putative protease [Bordetella avium 197N]
Length = 454
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 225/443 (50%), Positives = 318/443 (71%), Gaps = 4/443 (0%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ F +L + +L YA+++GAS + E +E G SV VRK I+ +EQ D+++++ +Y
Sbjct: 15 ARFSELVEQVLAYARQVGASDAVAEVSESLGLSVSVRKNDIETVEQTRDRSLDLTVYAGQ 74
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
+ G++STSDF + +L T+ AA++IAR TA+D AGLPD L D L+ PW
Sbjct: 75 SR----GSASTSDFSEAALRQTVEAAWHIARHTAADAAAGLPDVEMLATEHPDLDLHHPW 130
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
+ + A +A R E A + +S I N + GV T + F++ N+ GF+ GY +S+H +S
Sbjct: 131 AIGTEAAAELALRGERAARDVDSRITNTDGAGVNTYEGQFVMGNTRGFLGGYAYSRHSLS 190
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
++PIA +G+ MQRD WY+S DP L PE +G YAA+RT+SRL A+++ T K PVLFEA
Sbjct: 191 VAPIAGRGERMQRDYWYTSERDPALLASPEAVGRYAAQRTLSRLSARRLRTTKAPVLFEA 250
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
PLA LL F + SG +LYRK++FLVD+LGK +F+ HI ++EDPH+ G+ GSS FD+EG
Sbjct: 251 PLALGLLGAFTQAASGGALYRKASFLVDALGKPVFADHIDVLEDPHVRGAMGSSPFDDEG 310
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+TQ R VV G ++GYFLS+Y+A+KLGM TTGN+GG+H+L + S T+ D+ + MLKK
Sbjct: 311 VRTQARRVVAAGALEGYFLSSYTARKLGMSTTGNAGGSHNLTLTSRLTRPDDDFRAMLKK 370
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
+ TGLLVTEL+G G+NY+TGDYS+GAFGYW+ENG+IQ++VEEITI+G L MF+QIVA+G
Sbjct: 371 LGTGLLVTELIGQGVNYLTGDYSRGAFGYWVENGEIQHAVEEITIAGNLAEMFRQIVAVG 430
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
+D L+R + +SGSILIE M IAG
Sbjct: 431 ADTLSRGTKSSGSILIEQMSIAG 453
>gi|423015533|ref|ZP_17006254.1| modulator of DNA gyrase family protein 1 [Achromobacter
xylosoxidans AXX-A]
gi|338781432|gb|EGP45822.1| modulator of DNA gyrase family protein 1 [Achromobacter
xylosoxidans AXX-A]
Length = 454
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 223/443 (50%), Positives = 319/443 (72%), Gaps = 4/443 (0%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ F +L + L YA++IGAS ++ E +E G SV VRK I+ +EQ D+++++ +Y
Sbjct: 15 ARFSELVEQTLAYARQIGASDAAAEVSESLGLSVSVRKNDIETVEQTRDRSLDLTVYAGQ 74
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
+ G++STSDF + +L T+ AA++IAR TA+D AGLPD + L D L+ W
Sbjct: 75 SR----GSASTSDFSEAALRQTVEAAWHIARHTAADPAAGLPDADQLATEFPDLDLHRAW 130
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
+S ++A +A R E A ++ I N + V T + F++ N+ GF+ GYP+S+H +S
Sbjct: 131 TVSTEEAAELALRAERAAREVDARITNTDGATVGTYEGQFVMGNTRGFLGGYPYSRHSLS 190
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
++PIA +G MQRD WY+S DP KL PE +G YAA+RT+SRL A++I T K PVLFEA
Sbjct: 191 VAPIAGRGNGMQRDYWYTSERDPAKLATPEAVGRYAAERTLSRLSARRIRTGKFPVLFEA 250
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
PLA L+ + +G +LYRK++FL+D+LGK IF HI + EDPHI G+ GSS FD+EG
Sbjct: 251 PLALGLVGALTQAANGGALYRKASFLLDALGKPIFPEHINLTEDPHIRGAMGSSPFDDEG 310
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T+KR VV G+++GYFLS+Y+A+KLGM+TTGN+GG+H+L+ S T+ D+ + MLKK
Sbjct: 311 VRTRKRSVVSAGVLEGYFLSSYTARKLGMQTTGNAGGSHNLVFSSTLTRRGDDFEAMLKK 370
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TG LVTEL+G G+NY+TGDYS+GAFGYW+ENG+IQ++V+EITI+G L +MF+QIVA+G
Sbjct: 371 MGTGFLVTELIGQGVNYVTGDYSRGAFGYWVENGQIQHAVQEITIAGNLSDMFRQIVAVG 430
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
+D ++R + T+GSILIE M IAG
Sbjct: 431 ADTISRGTKTTGSILIEQMAIAG 453
>gi|422322475|ref|ZP_16403516.1| hypothetical protein HMPREF0005_02256 [Achromobacter xylosoxidans
C54]
gi|317402582|gb|EFV83144.1| hypothetical protein HMPREF0005_02256 [Achromobacter xylosoxidans
C54]
Length = 454
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 222/443 (50%), Positives = 319/443 (72%), Gaps = 4/443 (0%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ F +L + L YA++IGAS ++ E +E G SV VRK I+ +EQ D+++++ +Y
Sbjct: 15 ARFSELVEQTLAYARQIGASDAAAEVSESLGLSVSVRKNDIETVEQTRDRSLDLTVYAGQ 74
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
+ G++STSDF + +L T+ AA++IAR TA+D AGLPD + L D L+ W
Sbjct: 75 SR----GSASTSDFSEAALRQTVEAAWHIARHTAADPAAGLPDADQLATEFPDLDLHRAW 130
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
+S ++A +A R E A ++ I N + V T + F++ N+ GF+ GYP+S+H +S
Sbjct: 131 TVSTEEAAELALRAERAAREVDARITNTDGATVGTYEGQFVMGNTRGFLGGYPYSRHSLS 190
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
++PIA +G MQRD WY+S DP KL PE +G YAA+RT+SRL A++I T K PVLFEA
Sbjct: 191 VAPIAGRGNGMQRDYWYTSERDPAKLATPEAVGRYAAERTLSRLSARRIRTGKFPVLFEA 250
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
PLA L+ + +G +LYRK++FL+D+LGK IF HI + EDPHI G+ GSS FD+EG
Sbjct: 251 PLALGLVGALTQAANGGALYRKASFLLDALGKPIFPEHINLTEDPHIRGAMGSSPFDDEG 310
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T+KR VV G+++GYFLS+Y+A+KLGM+TTGN+GG+H+L+ S T+ D+ + MLKK
Sbjct: 311 VRTRKRNVVSAGVLEGYFLSSYTARKLGMQTTGNAGGSHNLVFSSTLTRRGDDFEAMLKK 370
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TG LVTEL+G G+NY+TGDYS+GAFGYW+ENG+IQ++V+E+TI+G L +MF+QIVA+G
Sbjct: 371 MGTGFLVTELIGQGVNYVTGDYSRGAFGYWVENGQIQHAVQEVTIAGNLSDMFRQIVAVG 430
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
+D ++R + T+GSILIE M IAG
Sbjct: 431 ADTISRGTKTTGSILIEQMAIAG 453
>gi|293603304|ref|ZP_06685732.1| U62 family microcin-processing peptidase 1 [Achromobacter
piechaudii ATCC 43553]
gi|292818214|gb|EFF77267.1| U62 family microcin-processing peptidase 1 [Achromobacter
piechaudii ATCC 43553]
Length = 454
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 223/443 (50%), Positives = 318/443 (71%), Gaps = 4/443 (0%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ F +L + L YA++IGAS ++ E +E G SV VRK I+ +EQ D+++++ +Y
Sbjct: 15 ARFSELVEQTLAYARQIGASDAAAEVSESLGLSVSVRKNDIETVEQTRDRSLDLTVYAGQ 74
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
+ G++STSDF + +L T+ AA++IAR TA+D AGLPD + L D L+ W
Sbjct: 75 SR----GSASTSDFSEAALRQTVEAAWHIARHTAADPAAGLPDADQLATEFPDLDLHHAW 130
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
++ + A +A R E A + + I N + V T + F++ N+ GF+ GYP+S+H +S
Sbjct: 131 TVTTEQAAELALRAERAARDVDPRITNTDGATVGTYEGQFVMGNTRGFLGGYPYSRHSLS 190
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
++PIA +G MQRD WY+S DP KL PE IG YAA+RT+SRL A++I T K PVLFEA
Sbjct: 191 VAPIAGRGNGMQRDYWYTSERDPAKLASPEAIGQYAAERTLSRLSARRIRTGKFPVLFEA 250
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
PLA L+ + ++G +LYRK++FL+D+LGK IF HI + EDPHI G+ GSS FD+EG
Sbjct: 251 PLALGLVGALTQAVNGGALYRKASFLLDALGKPIFPKHINLTEDPHIRGAMGSSPFDDEG 310
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T++R VV G+++GYFLS+Y+A+KLGM TTGN+GG+H+L+ S TK D+ + MLKK
Sbjct: 311 VRTRRRNVVSAGVLEGYFLSSYTARKLGMTTTGNAGGSHNLVFSSTLTKRGDDFEAMLKK 370
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TG LVTEL+G G+NY+TGDYS+GAFGYW+ENGKIQ++V+E+TI+G L +MF+QIVA+G
Sbjct: 371 MGTGFLVTELIGQGVNYVTGDYSRGAFGYWVENGKIQHAVQEVTIAGNLADMFQQIVAVG 430
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
+D ++R + T+GSILIE M IAG
Sbjct: 431 ADTISRGTKTTGSILIEQMAIAG 453
>gi|33593899|ref|NP_881543.1| hypothetical protein BP2964 [Bordetella pertussis Tohama I]
gi|384205204|ref|YP_005590943.1| hypothetical protein BPTD_2933 [Bordetella pertussis CS]
gi|408416671|ref|YP_006627378.1| hypothetical protein BN118_2874 [Bordetella pertussis 18323]
gi|410421809|ref|YP_006902258.1| hypothetical protein BN115_4035 [Bordetella bronchiseptica MO149]
gi|427819848|ref|ZP_18986911.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|33563973|emb|CAE43236.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|332383318|gb|AEE68165.1| hypothetical protein BPTD_2933 [Bordetella pertussis CS]
gi|401778841|emb|CCJ64299.1| conserved hypothetical protein [Bordetella pertussis 18323]
gi|408449104|emb|CCJ60791.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
gi|410570848|emb|CCN19048.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
Length = 454
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 325/443 (73%), Gaps = 4/443 (0%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ F +L + +L YA++ GAS ++ E +E G SV VRK I+ +EQ D+++++ +Y
Sbjct: 15 ARFSELVEQVLAYARQAGASDAAAEVSESLGLSVSVRKNDIETVEQTRDRSLDLTVYAGQ 74
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
+ G++STSDF +++L +T+ AA++IAR TA+D AGLPD + L D L+ PW
Sbjct: 75 SR----GSASTSDFSEQALRETVEAAWHIARHTAADPAAGLPDADLLATEFPDLGLHYPW 130
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
++ ++A +A R E A + ++ I N + V + + F++ N+ GF+ GYP+S+H +S
Sbjct: 131 PVTTEEAAELALRAERAARDVDARITNTDGASVASYEGQFVMGNTRGFLGGYPYSRHSLS 190
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
++PIA +G MQRD WY+S+ +P +L PE++G YAA+RT+SRL A+++ T K PVLFEA
Sbjct: 191 VAPIAGRGNNMQRDYWYTSDRNPNRLAAPEVVGRYAAERTLSRLSARRLRTGKFPVLFEA 250
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
PLA LL F + +G +LYRK+TFLVD+LGK IF+ HI + E+PHI G+ GSS FD+EG
Sbjct: 251 PLALGLLGAFTQAANGGALYRKATFLVDALGKPIFADHIDVSENPHIPGAMGSSPFDDEG 310
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T+ R VV G+++GYFLS+Y+A+KLGM TTGN+GG+H+L + S T+ D+ + ML+K
Sbjct: 311 VRTRARSVVSAGVLEGYFLSSYTARKLGMATTGNAGGSHNLTLSSRLTRPGDDFEAMLRK 370
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
+ TGLLVTEL+G G+NY++GDYS+GAFGYW+ENGKIQ++V+EITI+G L +MF+ IVA+G
Sbjct: 371 LGTGLLVTELIGQGVNYVSGDYSRGAFGYWVENGKIQHAVQEITIAGNLVDMFRHIVAVG 430
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
SD ++R + T+GSILIE M +AG
Sbjct: 431 SDAISRGTKTTGSILIEQMSVAG 453
>gi|427825154|ref|ZP_18992216.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|410590419|emb|CCN05506.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 454
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 217/443 (48%), Positives = 325/443 (73%), Gaps = 4/443 (0%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ F +L + +L YA++ GAS ++ E +E G SV VRK I+ +EQ D+++++ +Y
Sbjct: 15 ARFSELVEQVLAYARQAGASDAAAEVSESLGLSVSVRKNDIETVEQTRDRSLDLTVYAGQ 74
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
+ G++STSDF +++L +T+ AA++IAR TA+D AGLPD + L D L+ PW
Sbjct: 75 SR----GSASTSDFSEQALRETVEAAWHIARHTAADPAAGLPDADLLATEFPDLGLHYPW 130
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
++ ++A +A R E A + ++ I N + V + + F++ N+ GF+ GYP+S+H +S
Sbjct: 131 PVTTEEAAELALRAERAARDVDARITNTDGASVASYEGQFVMGNTRGFLGGYPYSRHSLS 190
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
++PIA +G MQRD WY+S+ +P +L PE++G YAA+RT+SRL A+++ T K PVLFEA
Sbjct: 191 VAPIAGRGNNMQRDYWYTSDRNPNRLAAPEVVGRYAAERTLSRLSARRLRTGKFPVLFEA 250
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
PLA LL F + +G +LYRK+TFLVD+LGK IF+ HI + E+PHI G+ GSS FD+EG
Sbjct: 251 PLALGLLGAFTQAANGGALYRKATFLVDALGKPIFADHIDVSENPHIPGAMGSSPFDDEG 310
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T+ R VV G+++GYFLS+Y+A+KLGM TTGN+GG+H+L + S T+ D+ + ML+K
Sbjct: 311 VRTRARSVVSAGVLEGYFLSSYTARKLGMATTGNAGGSHNLTLSSRLTRPGDDFEAMLRK 370
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
+ TGLLVTEL+G G+NY++GDYS+GAFGYW+ENGKIQ++V+EITI+G L +MF+ IVA+G
Sbjct: 371 LGTGLLVTELIGQGVNYVSGDYSRGAFGYWVENGKIQHAVQEITIAGNLVDMFRHIVAVG 430
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
+D ++R + T+GSILIE M +AG
Sbjct: 431 ADAISRGTKTTGSILIEQMSVAG 453
>gi|398805884|ref|ZP_10564840.1| putative Zn-dependent protease-like protein [Polaromonas sp. CF318]
gi|398090182|gb|EJL80669.1| putative Zn-dependent protease-like protein [Polaromonas sp. CF318]
Length = 471
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 232/450 (51%), Positives = 314/450 (69%), Gaps = 4/450 (0%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S F Y + F+ L L +AKK+GA+ ++ E +EG G SV VRKG+++ +E+N DK++
Sbjct: 25 SGFSYHRDFFEDLVDTALGHAKKLGATDAAAEASEGCGLSVSVRKGELENVERNRDKSLG 84
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
+ +YI GKK GN++TSDF K ++ T+ AAY+IARFTA D +GLPDE + +
Sbjct: 85 ITVYI--GKKR--GNAATSDFSKAAIEQTVKAAYDIARFTAEDETSGLPDERDIARVHPE 140
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
L+ PW + + A +A +CE A + LI N+E GV+ QQSHF A++ GF GY
Sbjct: 141 LDLFHPWSIDSEQAAQLALQCEAAALGTSRLITNSEGAGVSAQQSHFFSAHTKGFRGGYA 200
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
S+H IS++PIA KG +MQRD WYSS D +L +PE +G YAA+R ++RLK++KI T +
Sbjct: 201 SSRHSISVAPIAGKGDQMQRDAWYSSMRDAAELARPEAVGRYAAERALARLKSRKIPTTQ 260
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
CPVLFE+PLA LL F + +SG +LYRKSTFL DSLGK F HI + EDPH+ GS
Sbjct: 261 CPVLFESPLAAGLLGGFVQAVSGGALYRKSTFLADSLGKPAFPKHIDVAEDPHLRKGKGS 320
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
+ FD EGVKTQ R VV G ++GYFLSTYSA+KLGM+TTGN+GG+H+LI+ S T+ D+
Sbjct: 321 APFDEEGVKTQARKVVAGGRVEGYFLSTYSARKLGMRTTGNAGGSHNLILTSRHTRPGDD 380
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
L ML+K+ GL VTELMG G+NY+TGDYS+GA G+W+ENG+I + VEEITI+G L++M
Sbjct: 381 LDAMLRKLGRGLFVTELMGQGVNYVTGDYSRGASGFWVENGRIAFPVEEITIAGNLKDML 440
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
I A+G+D + T GSILI M +AG
Sbjct: 441 MGIEAVGADAYNYGAKTVGSILINRMKVAG 470
>gi|296136603|ref|YP_003643845.1| peptidase U62 modulator of DNA gyrase [Thiomonas intermedia K12]
gi|295796725|gb|ADG31515.1| peptidase U62 modulator of DNA gyrase [Thiomonas intermedia K12]
Length = 451
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 229/451 (50%), Positives = 321/451 (71%), Gaps = 6/451 (1%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNV 69
+F YSKS+FQ LAQ L A+K+GAS + +E +EG G SV VR G+I+ +E N DK++++
Sbjct: 3 RFAYSKSQFQDLAQQALEQARKVGASDAQVEVSEGQGMSVGVRNGQIENVEHNRDKSLSI 62
Query: 70 IIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM--NPL 127
++ DG++ G++STSDF +++ T AA++IAR+TA D+ AGLP+ L +
Sbjct: 63 SVF--DGQRR--GHASTSDFSAEAIARTAQAAFDIARYTAEDDCAGLPEVELLAIGRQQP 118
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
LY PW L+ A IA R E AF + I N+E V+ Q+SHF+LANS GF GY
Sbjct: 119 QLDLYHPWDLTPQSAAKIALRAEKAAFAVDPRIRNSEGASVSAQESHFVLANSRGFCDGY 178
Query: 188 PFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTR 247
S H +S +PIA +G +MQRD W++S DP L PE +G YAA+R +SRLKA+K+STR
Sbjct: 179 ATSSHSLSCAPIAGRGDDMQRDYWWTSECDPADLASPEAVGRYAAERALSRLKARKLSTR 238
Query: 248 KCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFG 307
KCPVLFE+PLA L+ F ISG +LYRKS+FL DSLG+++++ HI +IEDP + G
Sbjct: 239 KCPVLFESPLASGLIGSFTHAISGGALYRKSSFLQDSLGQQVWADHIDLIEDPSLPKRRG 298
Query: 308 SSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD 367
S+ FD+EGV T KR +V G++QGY L TYSA+KLGM+TTGN+GGAH+L++ S T++ D
Sbjct: 299 SAPFDSEGVTTHKRSLVDGGVVQGYLLGTYSARKLGMQTTGNAGGAHNLLLQSRLTQAKD 358
Query: 368 NLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNM 427
+L+ ML+K++TGL ELMG G+NY+TGDYS+G G+W+E GKI+Y V+EITI+G L++M
Sbjct: 359 DLRAMLRKLDTGLFAIELMGHGVNYVTGDYSRGVMGFWVEGGKIRYPVQEITIAGNLRDM 418
Query: 428 FKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+ +VA+G+D T S T+GSILI+ M + G
Sbjct: 419 LRNVVAVGADTHTYGSKTTGSILIDGMTVGG 449
>gi|33603333|ref|NP_890893.1| hypothetical protein BB4359 [Bordetella bronchiseptica RB50]
gi|410474428|ref|YP_006897709.1| hypothetical protein BN117_3960 [Bordetella parapertussis Bpp5]
gi|412341344|ref|YP_006970099.1| hypothetical protein BN112_4063 [Bordetella bronchiseptica 253]
gi|427816343|ref|ZP_18983407.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|33577457|emb|CAE34722.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|408444538|emb|CCJ51293.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
gi|408771178|emb|CCJ55977.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
gi|410567343|emb|CCN24914.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
Length = 454
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 217/443 (48%), Positives = 324/443 (73%), Gaps = 4/443 (0%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ F +L + +L YA++ GAS ++ E +E G SV VRK I+ +EQ D+++++ +Y
Sbjct: 15 ARFSELVEQVLAYARQAGASDAAAEVSESLGLSVSVRKNDIETVEQTRDRSLDLTVYAGQ 74
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
+ G++STSDF +++L +T+ AA++IAR TA+D AGLPD + L D L+ PW
Sbjct: 75 SR----GSASTSDFSEQALRETVEAAWHIARHTAADPAAGLPDADLLATEFPDLGLHYPW 130
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
++ ++A +A R E A ++ I N + V + + F++ N+ GF+ GYP+S+H +S
Sbjct: 131 PVTTEEAAELALRAERAAREVDARITNTDGASVASYEGQFVMGNTRGFLGGYPYSRHSLS 190
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
++PIA +G MQRD WY+S+ +P +L PE++G YAA+RT+SRL A+++ T K PVLFEA
Sbjct: 191 VAPIAGRGNNMQRDYWYTSDRNPNRLAAPEVVGRYAAERTLSRLSARRLRTGKFPVLFEA 250
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
PLA LL F + +G +LYRK+TFLVD+LGK IF+ HI + E+PHI G+ GSS FD+EG
Sbjct: 251 PLALGLLGAFTQAANGGALYRKATFLVDALGKPIFADHIDVSENPHIPGAMGSSPFDDEG 310
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T+ R VV G+++GYFLS+Y+A+KLGM TTGN+GG+H+L + S T+ D+ + ML+K
Sbjct: 311 VRTRARSVVSAGVLEGYFLSSYTARKLGMATTGNAGGSHNLTLSSRLTRPGDDFEAMLRK 370
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
+ TGLLVTEL+G G+NY++GDYS+GAFGYW+ENGKIQ++V+EITI+G L +MF+ IVA+G
Sbjct: 371 LGTGLLVTELIGQGVNYVSGDYSRGAFGYWVENGKIQHAVQEITIAGNLVDMFRHIVAVG 430
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
+D ++R + T+GSILIE M +AG
Sbjct: 431 ADAISRGTKTTGSILIEQMSVAG 453
>gi|145588714|ref|YP_001155311.1| C69 family peptidase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047120|gb|ABP33747.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 448
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 237/452 (52%), Positives = 317/452 (70%), Gaps = 8/452 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F YS S+FQ++ ML AK+ GAS + E +EG G SV VRKG+++ IEQ+ DK + V
Sbjct: 2 FTYSSSQFQEIINFMLKEAKRRGASDAVAEISEGQGLSVTVRKGEVETIEQSLDKQVGVT 61
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+++ + GN+STSDF K+SL T++AAY+IA+ TA D AG + LE NP+D
Sbjct: 62 VFLGHHR----GNASTSDFSKESLKATVDAAYHIAQHTAEDACAGPAEAELLEKNPMDLD 117
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
L+ PW + A IA E AF+ + I N++ V+ +HF++ SHGFM GYPFS
Sbjct: 118 LFHPWNIDAAGAVEIARIAEGAAFSVSKQIQNSDGASVSAHHAHFMMGTSHGFMGGYPFS 177
Query: 191 KHIISISPIA-IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTR 247
+H IS +PIA + GK MQRD+WYSS+ P++L P IG YAA+R +SRLKA+ I+TR
Sbjct: 178 RHYISCAPIASVGGKNAHMQRDDWYSSSRLPQELADPAAIGKYAAQRALSRLKARSITTR 237
Query: 248 KCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFG 307
+CPV+FEAPLA LL + +SG +LYR+S+FL+DSLGK++ H+ + E+PH+ G
Sbjct: 238 RCPVIFEAPLAAGLLGGLVQAVSGGALYRRSSFLLDSLGKQVLPKHVSLFENPHLKAMTG 297
Query: 308 SSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD 367
S+ FD EGVKT R VV GI++GYFLSTYSA+KLGMKTTGN+GG+HHL + S KT
Sbjct: 298 SAPFDEEGVKTTARTVVDKGILEGYFLSTYSARKLGMKTTGNAGGSHHLTLQSKKTPKG- 356
Query: 368 NLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNM 427
L +LK+M TGLLVTELMG G+NY+TGDYS+GAFGYW+ENG+IQY VEE+TI+G L++M
Sbjct: 357 GLTALLKEMGTGLLVTELMGQGVNYVTGDYSRGAFGYWVENGEIQYPVEEVTIAGNLRDM 416
Query: 428 FKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
I IGSD L R + +GSILI +M + GK
Sbjct: 417 LLDIEMIGSDTLIRGTKETGSILIGSMTVGGK 448
>gi|33598395|ref|NP_886038.1| hypothetical protein BPP3886 [Bordetella parapertussis 12822]
gi|33574524|emb|CAE39169.1| conserved hypothetical protein [Bordetella parapertussis]
Length = 454
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 324/443 (73%), Gaps = 4/443 (0%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ F +L + +L YA++ GAS ++ E +E G SV VRK I+ +EQ D+++++ +Y
Sbjct: 15 ARFSELVEQVLAYARQAGASDAAAEVSESLGLSVSVRKNDIETVEQTRDRSLDLTVYAGQ 74
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
+ G++STSDF +++L +T+ AA++IAR TA+D AGLPD + L D L+ PW
Sbjct: 75 SR----GSASTSDFSEQALRETVEAAWHIARHTAADPAAGLPDADLLATEFPDLGLHYPW 130
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
++ ++A +A R E A ++ I N + V + + F++ N+ GF+ GYP+S+H +S
Sbjct: 131 PVTTEEAAELALRAERAAREVDARITNTDGASVASYEGQFVMGNTRGFLGGYPYSRHSLS 190
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
++PIA +G MQRD WY+S+ +P +L PE++G YAA+RT+SRL A+++ T K PVLFEA
Sbjct: 191 VAPIAGRGNNMQRDYWYTSDRNPNRLAAPEVVGRYAAERTLSRLSARRLRTGKFPVLFEA 250
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
PLA LL F + +G +LYRK+TFLVD+LGK IF+ HI + E+PHI G+ GSS FD+EG
Sbjct: 251 PLALGLLGAFTQAANGGALYRKATFLVDALGKPIFADHIDVSENPHIPGAMGSSPFDDEG 310
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T+ R VV G+++GYFLS+Y+A+KLG+ TTGN+GG+H+L + S T+ D+ + ML+K
Sbjct: 311 VRTRARSVVSAGVLEGYFLSSYTARKLGLATTGNAGGSHNLTLSSRLTRPGDDFEAMLRK 370
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
+ TGLLVTEL+G G+NY++GDYS+GAFGYW+ENGKIQ++V+EITI+G L +MF+ IVA+G
Sbjct: 371 LGTGLLVTELIGQGVNYVSGDYSRGAFGYWVENGKIQHAVQEITIAGNLVDMFRHIVAVG 430
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
+D ++R + T+GSILIE M +AG
Sbjct: 431 ADAISRGTKTTGSILIEQMSVAG 453
>gi|410694306|ref|YP_003624928.1| Protein pmbA (Protein tldE) [Thiomonas sp. 3As]
gi|294340731|emb|CAZ89123.1| Protein pmbA (Protein tldE) [Thiomonas sp. 3As]
Length = 451
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 229/452 (50%), Positives = 322/452 (71%), Gaps = 8/452 (1%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNV 69
+F Y+KS+FQ LAQ L A+K+GAS + +E +EG G SV VR G+I+ +E N DK++++
Sbjct: 3 RFAYNKSQFQVLAQQALEQARKVGASDAQVEVSEGQGMSVGVRNGQIENVEHNRDKSLSI 62
Query: 70 IIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTL---EMNP 126
++ DG++ G++STSDF +++ T AA++IAR+TA D+ AGLP+ L + P
Sbjct: 63 SVF--DGQRR--GHASTSDFSAEAIARTAQAAFDIARYTAEDDCAGLPEVEMLAIGQQQP 118
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
LY PW L+ A IA R E AF + I N+E V+ Q+SHF+LANS GF G
Sbjct: 119 -QLDLYHPWDLTPQSAAKIALRAEKAAFAVDPRIRNSEGASVSAQESHFVLANSRGFCDG 177
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
Y S H +S +PIA +G +MQRD W++S DP L PE +G YAA+R +SRLKA+K+ST
Sbjct: 178 YATSSHSLSCAPIAGRGDDMQRDYWWTSECDPADLASPEAVGRYAAERALSRLKARKLST 237
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
RKCPVLFE+PLA L+ F ISG +LYRKS+FL DSLG+++++ HI +IEDP +
Sbjct: 238 RKCPVLFESPLASGLIGSFTHAISGGALYRKSSFLQDSLGQQVWADHIDLIEDPTLPKRR 297
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
GS+ FD+EGV T KR +V G++QGY L TYSA+KLGM+TTGN+GGAH+L++ S T++
Sbjct: 298 GSAPFDSEGVATHKRSLVDGGVVQGYLLGTYSARKLGMQTTGNAGGAHNLLLQSRLTQAK 357
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
D+L+ ML+K++TGL ELMG G+NY+TGDYS+G G+W+E GKI+Y V+EITI+G L++
Sbjct: 358 DDLRAMLRKLDTGLFAIELMGHGVNYVTGDYSRGVMGFWVEGGKIRYPVQEITIAGNLRD 417
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
M + +VA+G+D T S T+GSILI+ M + G
Sbjct: 418 MLRNVVAVGADTHTYGSKTTGSILIDGMTVGG 449
>gi|319943394|ref|ZP_08017676.1| copper-exporting ATPase [Lautropia mirabilis ATCC 51599]
gi|319743209|gb|EFV95614.1| copper-exporting ATPase [Lautropia mirabilis ATCC 51599]
Length = 492
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 231/455 (50%), Positives = 315/455 (69%), Gaps = 7/455 (1%)
Query: 7 NRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
R F Y + +FQ+L ++ + AK +GA+ E +E +G ++ VRKGK++ IEQ DK
Sbjct: 42 ERPLFDYRREDFQELVEETMRQAKALGATAVVAEVSESSGLALTVRKGKVETIEQTRDKG 101
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ V +Y+ G++ G++STSDF ++L T+ AAY+IA T D FAGLPDE L
Sbjct: 102 LGVSVYV--GQRR--GHASTSDFSPQALARTVRAAYDIASITGEDPFAGLPDERRLARGE 157
Query: 127 LD---FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGF 183
D L+ PW +S+ A +A E +F + I N++ V+ HFL ANS GF
Sbjct: 158 NDVSGLALFQPWHISVPQAIELAREIEAASFAVSPQIANSDGASVSVGHGHFLSANSLGF 217
Query: 184 MSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKK 243
G+ S+H +S+ PIA +G++MQRD WYSS P L PE +G YAA+R +SRL A+K
Sbjct: 218 CDGFAHSRHTLSVGPIARRGRDMQRDGWYSSARSPADLASPEALGRYAAERALSRLGARK 277
Query: 244 ISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHIL 303
+STRK PVLFEAPLA LL + +SG++LYR+++FLVDSLGK+IF +HI I+EDP I
Sbjct: 278 LSTRKVPVLFEAPLALGLLGSLVQALSGSALYRQASFLVDSLGKRIFPNHIDIVEDPFIP 337
Query: 304 GSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKT 363
G+ G+ FD+EGV T R VVK G ++GYFLS+YSA+KLGM+TTGN+GG+H+L + S T
Sbjct: 338 GAMGTGPFDDEGVATAARDVVKGGRLKGYFLSSYSARKLGMQTTGNAGGSHNLRLSSRLT 397
Query: 364 KSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGK 423
DN MLKKM TGLLVTE+MG G+NY+TGDYS+GA G+W+ENG+IQY VEEITI+G
Sbjct: 398 ARGDNFARMLKKMGTGLLVTEVMGQGVNYVTGDYSRGASGFWVENGEIQYPVEEITIAGN 457
Query: 424 LQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
L +M++ IVA+G+D LTR + T GS+LIE M +AG
Sbjct: 458 LADMYRGIVAVGNDELTRGTKTCGSVLIEEMAVAG 492
>gi|121604291|ref|YP_981620.1| C69 family peptidase [Polaromonas naphthalenivorans CJ2]
gi|120593260|gb|ABM36699.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Polaromonas naphthalenivorans CJ2]
Length = 469
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/448 (51%), Positives = 313/448 (69%), Gaps = 4/448 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F Y + F+ L L++AKK+GA+ ++ E +EG G SV VRKG+++ +E+N DK++ V
Sbjct: 25 FSYHRDFFEDLVDTALSHAKKLGATDAAAEASEGCGLSVSVRKGELESVERNRDKSLGVT 84
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GKK GN+STSDF K ++ T+ AAY+IA FTA D +GLPDE +
Sbjct: 85 VYV--GKKR--GNASTSDFSKAAIQQTVKAAYDIASFTAEDETSGLPDEQDIAREHPALD 140
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
L+ PW ++ + A +A +CE A + LI N+E GV+ QQSHF A++ GF GY S
Sbjct: 141 LFHPWAITSEQAAQLALQCEAAAMGTSRLITNSEGAGVSAQQSHFFSAHTSGFRGGYASS 200
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS++PIA KGK+MQRD WYSS D +L PE +G YAA+R ++RLK +KI T +CP
Sbjct: 201 RHSISVAPIAGKGKQMQRDAWYSSMRDANELAHPEAVGRYAAERALARLKGRKIPTVECP 260
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFE+PLA LL F + +SG +LYRKSTFL +SLGK F HI I EDPH+L GS+
Sbjct: 261 VLFESPLAAGLLGGFVQAVSGGALYRKSTFLANSLGKLAFPKHIDINEDPHLLKGKGSAP 320
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGVKT R VV+ G + GYFLSTYSA+KLGM+TTGN+GG+H+L + S KTK+ D+L
Sbjct: 321 FDEEGVKTSARQVVEAGRVAGYFLSTYSARKLGMRTTGNAGGSHNLTLTSRKTKAGDDLD 380
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
ML+K+ GL VTELMG G+NY+TGDYS+GA G+W+ENG+I + VEEITI+G L++M
Sbjct: 381 AMLRKLGRGLFVTELMGQGVNYVTGDYSRGASGFWVENGEIAFPVEEITIAGNLKDMLLG 440
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I A+G+D + T GSIL+ M +AG
Sbjct: 441 IQAVGADTYNYGAKTVGSILVNRMKVAG 468
>gi|121593468|ref|YP_985364.1| microcin-processing peptidase 1 [Acidovorax sp. JS42]
gi|120605548|gb|ABM41288.1| microcin-processing peptidase 1 [Acidovorax sp. JS42]
Length = 486
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/455 (50%), Positives = 319/455 (70%), Gaps = 9/455 (1%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S F Y++ F+ L L +AKK+GA+ + + +EG G SV VRKG+++ +E+N DK++
Sbjct: 35 SGFSYTREFFEGLVDHALAHAKKLGATDAGADASEGCGLSVNVRKGELETVERNRDKSLG 94
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTL--EMNP 126
V +Y+ + GN+STSDF ++ T+ AAY+IARFTA D AGLPD + +
Sbjct: 95 VTVYVGHRR----GNASTSDFSLAAVERTVQAAYDIARFTAEDPVAGLPDAADIAPQETH 150
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D +L+ PW ++ ++A L+A CE AF + I N+E GV+ QQSHF A++ GF G
Sbjct: 151 RDLQLFHPWAITSEEAALLALECEAAAFKTHKRITNSEGAGVSAQQSHFFSAHTRGFRGG 210
Query: 187 YPFSKHIISISPIA-IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKK 243
Y S+H IS++PIA + G+ EMQRD WYSS D ++L PE +G YAA+R +SRL ++K
Sbjct: 211 YASSRHSISVAPIASLPGRNAEMQRDAWYSSMRDARELAAPEAVGRYAAQRALSRLGSRK 270
Query: 244 ISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHIL 303
I T +CPVLFE+PLA LL F + +SG +LYRKS+FLVDSLGK++F+ HI + EDP IL
Sbjct: 271 IPTTECPVLFESPLAAGLLGGFVQAVSGGALYRKSSFLVDSLGKQVFAKHIDVAEDPFIL 330
Query: 304 GSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKT 363
G GSS FD+EGV+ R VV+ G +QGYFLSTYSA+KLGM TTGN+GG+H+L++ S T
Sbjct: 331 GGKGSSPFDDEGVRVAPRQVVEAGRVQGYFLSTYSARKLGMPTTGNAGGSHNLVLSSRLT 390
Query: 364 KSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGK 423
K D+L ML+K+ TGL V ELMG G+NY+TGDYS+GA G+W+ENG+I Y V EITI+G
Sbjct: 391 KPGDDLDAMLQKLGTGLFVIELMGQGVNYVTGDYSRGASGFWVENGRIAYPVHEITIAGN 450
Query: 424 LQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
L++M + I A+G+D T + T GSILI M +AG
Sbjct: 451 LKDMLRGIEAVGADAYTYGAKTVGSILINRMKVAG 485
>gi|319761843|ref|YP_004125780.1| peptidase u62 modulator of DNA gyrase [Alicycliphilus denitrificans
BC]
gi|330826297|ref|YP_004389600.1| peptidase U62 modulator of DNA gyrase [Alicycliphilus denitrificans
K601]
gi|317116404|gb|ADU98892.1| peptidase U62 modulator of DNA gyrase [Alicycliphilus denitrificans
BC]
gi|329311669|gb|AEB86084.1| peptidase U62 modulator of DNA gyrase [Alicycliphilus denitrificans
K601]
Length = 473
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/464 (50%), Positives = 322/464 (69%), Gaps = 13/464 (2%)
Query: 2 EQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQ 61
+ + S F Y++ F+ L L +A+K+GAS + + +EG G SV VRKG+++ +E+
Sbjct: 15 QHAARPESGFSYTREFFEGLVDHALAHARKLGASDAGADASEGCGLSVNVRKGELETVER 74
Query: 62 NNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENT 121
N DK++ V +Y+ + GN+STSDF ++ T+ AAY+IARFTA D+ AGLPDE
Sbjct: 75 NRDKSLGVTVYLGHRR----GNASTSDFSPAAVERTVQAAYDIARFTAEDHVAGLPDE-- 128
Query: 122 LEMNPL----DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLL 177
++ P D +L+ PW ++ + A +A +CE AF + I N+E GV+ QQSHF
Sbjct: 129 ADIAPAGTHRDLQLFHPWAITSEQAAQLALQCEAAAFKTHRRITNSEGAGVSAQQSHFFS 188
Query: 178 ANSHGFMSGYPFSKHIISISPIA-IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKR 234
A++ GF GY S+H IS++PIA + G+ EMQRD WYSS D + L PE +G YAA+R
Sbjct: 189 AHTRGFRGGYASSRHSISVAPIASMPGRNAEMQRDAWYSSMRDARDLAAPEAVGRYAAER 248
Query: 235 TISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHI 294
+SRL ++KI T +CPVLFE+PLA LL F + +SG +LYR+S+FLVDSLGK++F+ HI
Sbjct: 249 ALSRLGSRKIPTTECPVLFESPLAAGLLGGFVQAVSGGALYRRSSFLVDSLGKQVFADHI 308
Query: 295 QIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAH 354
+ EDP I G GSS FD EGV+ R VV+ G +QGYFLSTYSA+KLGMKTTGN+GG+H
Sbjct: 309 DLAEDPFIPGGKGSSPFDEEGVRVAPRQVVEAGRVQGYFLSTYSARKLGMKTTGNAGGSH 368
Query: 355 HLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYS 414
+L++ S T+ D+L ML+K+ TGL V ELMG G+NY+TGDYS+GA G+W+ENG+I Y
Sbjct: 369 NLLLSSRLTQPGDDLDAMLRKLGTGLFVIELMGQGVNYVTGDYSRGASGFWVENGRIAYP 428
Query: 415 VEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
V EITI+G L++M + IVA+G+D + T GSILIE M +AG
Sbjct: 429 VHEITIAGNLKDMLRGIVAVGADAYNYGAKTVGSILIERMKVAG 472
>gi|393758882|ref|ZP_10347701.1| hypothetical protein QWA_07174 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393162778|gb|EJC62833.1| hypothetical protein QWA_07174 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 455
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 222/452 (49%), Positives = 321/452 (71%), Gaps = 6/452 (1%)
Query: 9 SKFIYSKSEFQ--QLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
S+ S ++FQ +L + L +AKK+GAS ++++ +E G +V VR+ +++ +EQ D++
Sbjct: 7 SQLSISANQFQFCELVDEALRHAKKLGASDAAVDISENKGLAVSVRQLELETVEQTQDRS 66
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ V ++ G++ G++STSDF K+L +T+ AA++IAR+TA D FAGLP+ + L
Sbjct: 67 LGVTVFA--GQRS--GSASTSDFSVKALRETVEAAWHIARYTAEDPFAGLPEADMLAQQY 122
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D L+ PW L D A +A R E A + LI N+E V T + HF++ NS GF+ G
Sbjct: 123 PDLHLHHPWLLDADQAARLAIRAEQAALELSPLISNSEGASVDTLEGHFVMGNSRGFLGG 182
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
YP+S+H +S+SPIA KG M RD WYSS+ DP +L PE +G YAA+RT+SRL A++I T
Sbjct: 183 YPYSRHSLSVSPIAGKGDNMHRDYWYSSSRDPSRLASPESVGRYAAERTLSRLSARRIPT 242
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
+ PVLFEAPLA L+ + SG++LYRK++FL+DSLGK + + HI ++E PH+ +
Sbjct: 243 GRYPVLFEAPLAVGLIGSLVQATSGSALYRKTSFLLDSLGKTVMAKHIDVLERPHLAAAM 302
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
GS+ FD+EGV T R VV+ G ++GYFLS+Y+ +KLGM +TGN+GG+H+L++ S T+
Sbjct: 303 GSAPFDSEGVLTADRDVVRAGELKGYFLSSYAGRKLGMPSTGNAGGSHNLLLSSRLTRPE 362
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
D+L MLKKM+ GLLVTEL+G G+NY+TGDYS+GAFGYW+ENG+IQ++VEE+TI+G L
Sbjct: 363 DDLDAMLKKMDRGLLVTELIGQGVNYLTGDYSRGAFGYWVENGRIQHAVEEVTIAGNLAE 422
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
MF QIVA+G+D S +GSILIE M +AG
Sbjct: 423 MFAQIVAVGADTFAAGSKRTGSILIEQMSVAG 454
>gi|424778311|ref|ZP_18205261.1| hypothetical protein C660_15129 [Alcaligenes sp. HPC1271]
gi|422886850|gb|EKU29262.1| hypothetical protein C660_15129 [Alcaligenes sp. HPC1271]
Length = 455
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 220/442 (49%), Positives = 319/442 (72%), Gaps = 4/442 (0%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
+F +L + L +AKK+GAS ++++ +E G +V VR+ +++ +EQ D+++ V ++ G
Sbjct: 17 QFCELVDEALRHAKKLGASDAAVDISENKGLAVSVRQMELETVEQTQDRSLGVTVFA--G 74
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
++ G++STSDF K+L +T+ AA++IAR+TA D FAGLP+++ L + D L+ PW
Sbjct: 75 QR--SGSASTSDFSIKALRETVEAAWHIARYTAEDPFAGLPEKDMLAQSYPDLHLHHPWL 132
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
L D A +A R E A + LI N+E V T + HF++ NS GF+ GYP+S+H +S+
Sbjct: 133 LDADQAVKLAIRAEQAALELSPLISNSEGASVDTLEGHFVMGNSRGFLGGYPYSRHSLSV 192
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
SPIA KG M RD WYSS+ DP +L PE +G YAA+RT+SRL A++I T + PVLFEAP
Sbjct: 193 SPIAGKGDNMHRDYWYSSSRDPSRLASPESVGRYAAERTLSRLSARRIPTGRYPVLFEAP 252
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L+ + SG++LYRK++FL+DSLGK + + HI ++E PH+ + GS+ FD+EGV
Sbjct: 253 LAVGLIGSLVQATSGSALYRKTSFLLDSLGKSVMAKHIDVLERPHLAAAMGSAPFDSEGV 312
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
+T R VV+ G ++GYFLS+Y+ +KLGM +TGN+GG+H+L++ S T+ D+L MLKKM
Sbjct: 313 RTCDRDVVRGGELKGYFLSSYAGRKLGMPSTGNAGGSHNLLLSSRLTRPEDDLDAMLKKM 372
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
+ GLLVTEL+G GINY+TGDYS+GAFGYW+ENG+IQ++VEE+TI+G L MF QIVA+G+
Sbjct: 373 DRGLLVTELIGQGINYLTGDYSRGAFGYWVENGRIQHAVEEVTIAGNLAEMFVQIVAVGA 432
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D S +GSILIE M +AG
Sbjct: 433 DTFAAGSKRTGSILIEQMSVAG 454
>gi|222110185|ref|YP_002552449.1| peptidase u62 modulator of DNA gyrase [Acidovorax ebreus TPSY]
gi|221729629|gb|ACM32449.1| peptidase U62 modulator of DNA gyrase [Acidovorax ebreus TPSY]
Length = 469
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/455 (50%), Positives = 319/455 (70%), Gaps = 9/455 (1%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S F Y++ F+ L L +AKK+GA+ + + +EG G SV VRKG+++ +E+N DK++
Sbjct: 18 SGFSYTREFFEGLVDHALAHAKKLGATDAGADASEGCGLSVNVRKGELETVERNRDKSLG 77
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTL--EMNP 126
V +Y+ + GN+STSDF ++ T+ AAY+IARFTA D AGLPD + +
Sbjct: 78 VTVYVGHRR----GNASTSDFSLAAVERTVQAAYDIARFTAEDPVAGLPDAADIAPQETH 133
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D +L+ PW ++ ++A L+A CE AF + I N+E GV+ QQSHF A++ GF G
Sbjct: 134 RDLQLFHPWAITSEEAALLALECEAAAFKTHKRITNSEGAGVSAQQSHFFSAHTRGFRGG 193
Query: 187 YPFSKHIISISPIA-IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKK 243
Y S+H IS++PIA + G+ EMQRD WYSS D ++L PE +G YAA+R +SRL ++K
Sbjct: 194 YASSRHSISVAPIASLPGRNAEMQRDAWYSSMRDARELAAPEAVGRYAAQRALSRLGSRK 253
Query: 244 ISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHIL 303
I T +CPVLFE+PLA LL F + +SG +LYRKS+FLVDSLGK++F+ HI + EDP IL
Sbjct: 254 IPTTECPVLFESPLAAGLLGGFVQAVSGGALYRKSSFLVDSLGKQVFAKHIDVAEDPFIL 313
Query: 304 GSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKT 363
G GSS FD+EGV+ R VV+ G +QGYFLSTYSA+KLGM TTGN+GG+H+L++ S T
Sbjct: 314 GGKGSSPFDDEGVRVAPRQVVEAGRVQGYFLSTYSARKLGMPTTGNAGGSHNLVLSSRLT 373
Query: 364 KSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGK 423
K D+L ML+K+ TGL V ELMG G+NY+TGDYS+GA G+W+ENG+I Y V EITI+G
Sbjct: 374 KPGDDLDAMLQKLGTGLFVIELMGQGVNYVTGDYSRGASGFWVENGRIAYPVHEITIAGN 433
Query: 424 LQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
L++M + I A+G+D T + T GSILI M +AG
Sbjct: 434 LKDMLRGIEAVGADAYTYGAKTVGSILINRMKVAG 468
>gi|239816525|ref|YP_002945435.1| peptidase U62 modulator of DNA gyrase [Variovorax paradoxus S110]
gi|239803102|gb|ACS20169.1| peptidase U62 modulator of DNA gyrase [Variovorax paradoxus S110]
Length = 456
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 225/450 (50%), Positives = 313/450 (69%), Gaps = 4/450 (0%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S F YS+S F+ L L +A+K+GA+ + E +EG G SV VRKG+++ +E+N DK++
Sbjct: 10 SGFAYSRSFFENLVDTALAHARKLGATDAGAEASEGCGLSVSVRKGELENVERNRDKSLG 69
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
+ +Y+ + GN+STSDF + ++ T+ AAY+IARFTA D +GLPDE + +
Sbjct: 70 ITVYVGHRR----GNASTSDFSEAAIAQTVQAAYDIARFTAEDPVSGLPDEEDIAKEHPE 125
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
L+ PW ++ ++A +A CE A + + I N+E GV+ QQSHF A++HGF GY
Sbjct: 126 LDLFHPWSVTSEEAARLALECEEAALSTDKRITNSEGAGVSAQQSHFFSAHTHGFRGGYA 185
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
S+H IS++PIA KG +MQRD+WYSS +L P+ +G YAA+R +SRLK++KI T +
Sbjct: 186 SSRHSISVAPIAGKGDDMQRDSWYSSMRSAGELASPQAVGRYAAERALSRLKSRKIKTTE 245
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
CPVLFE+PLA LL + +SG +LYRKSTFL+DSLGK + H+ + EDPHIL GS
Sbjct: 246 CPVLFESPLAVGLLGGLVQAVSGGALYRKSTFLLDSLGKPVLPRHVDVAEDPHILRGKGS 305
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
S FD+EGV T+ R VV G ++GYFLSTYSA+KLGMKTTGN+GG+H+L + S T+ D+
Sbjct: 306 SPFDDEGVVTRARKVVDAGRLEGYFLSTYSARKLGMKTTGNAGGSHNLTLSSRLTQPGDD 365
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
L ML K+ TGL V ELMG G+NY+TGDYS+GA G+W+E GKI + V EITI+G L++M
Sbjct: 366 LDAMLAKLGTGLFVIELMGQGVNYVTGDYSRGASGFWVEKGKIAFPVHEITIAGNLKDML 425
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
I AIG+D T + T+GS+L+ M +AG
Sbjct: 426 MGIEAIGADAYTFGAKTTGSVLVNRMKVAG 455
>gi|264679611|ref|YP_003279518.1| peptidase U62, modulator of DNA gyrase [Comamonas testosteroni
CNB-2]
gi|262210124|gb|ACY34222.1| peptidase U62, modulator of DNA gyrase [Comamonas testosteroni
CNB-2]
Length = 473
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/456 (50%), Positives = 323/456 (70%), Gaps = 9/456 (1%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
++ F +S++ F+ L L +AKK+GA+ + E +EG G SV VRKG+++ +E+N DK++
Sbjct: 21 QAGFSFSQAFFEGLVDQALQHAKKLGATDAGAEASEGCGLSVSVRKGQLETVERNRDKSL 80
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM--N 125
V +Y+ G++ GN+STSDF + ++ T+ AAY+IARFTA D FA LPD + +
Sbjct: 81 GVTVYL--GQRR--GNASTSDFSEAAIKQTVQAAYDIARFTAEDPFARLPDSADIALPGT 136
Query: 126 PLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMS 185
D L+ PW ++ + A +A RCE AF + + N+E GV+ QQSHF A+++GF
Sbjct: 137 HRDLDLFHPWDITSEAAAEMALRCEEAAFKTHRRVSNSEGAGVSAQQSHFFTAHTNGFRG 196
Query: 186 GYPFSKHIISISPIA-IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAK 242
GY S+H +S++PIA + GK EMQRD WYSS + L PE +G YAA+RT+SRL ++
Sbjct: 197 GYASSRHSMSVAPIAKLPGKNGEMQRDYWYSSMRNAADLASPEAVGRYAAERTLSRLGSR 256
Query: 243 KISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHI 302
KI T +CPVLFE+PLA LL F + +SG++LYRKSTFL+DS+GK IF HI + EDP +
Sbjct: 257 KIPTTECPVLFESPLAAGLLGSFVQAVSGSALYRKSTFLLDSMGKPIFPKHIDVEEDPFV 316
Query: 303 LGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNK 362
LG GSS FD EGV+ Q R VV G ++GYFLS+YSA+KLGMKTTGN+GG+H+L++ S +
Sbjct: 317 LGGKGSSPFDEEGVRVQARKVVDAGRVEGYFLSSYSARKLGMKTTGNAGGSHNLVMTSRR 376
Query: 363 TKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISG 422
TK+ D+L MLKK+ TGL V ELMG G+NY+TGDYS+GA G+W+ENG+I + V+EITI+G
Sbjct: 377 TKAGDDLDAMLKKLGTGLFVVELMGQGVNYVTGDYSRGASGFWVENGEIAFPVDEITIAG 436
Query: 423 KLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
L+ MFK I AIG+D + T GS+LI M +AG
Sbjct: 437 NLKTMFKGIEAIGADAYNYGAKTVGSMLINRMKVAG 472
>gi|299533297|ref|ZP_07046681.1| peptidase U62, modulator of DNA gyrase [Comamonas testosteroni S44]
gi|298718827|gb|EFI59800.1| peptidase U62, modulator of DNA gyrase [Comamonas testosteroni S44]
Length = 473
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/456 (50%), Positives = 323/456 (70%), Gaps = 9/456 (1%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
++ F +S++ F+ L L +AKK+GA+ + E +EG G SV VRKG+++ +E+N DK++
Sbjct: 21 QAGFSFSQAFFEGLVDQALQHAKKLGATDAGAEASEGCGLSVSVRKGQLETVERNRDKSL 80
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM--N 125
V +Y+ G++ GN+STSDF + ++ T+ AAY+IARFTA D FA LPD + +
Sbjct: 81 GVTVYM--GQRR--GNASTSDFSEAAIKQTVQAAYDIARFTAEDPFARLPDSADIALPGT 136
Query: 126 PLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMS 185
D L+ PW ++ + A +A RCE AF + + N+E GV+ QQSHF A+++GF
Sbjct: 137 HRDLDLFHPWDITSEAAAEMALRCEEAAFKTHRRVSNSEGAGVSAQQSHFFTAHTNGFRG 196
Query: 186 GYPFSKHIISISPIA-IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAK 242
GY S+H +S++PIA + GK EMQRD WYSS + L PE +G YAA+RT+SRL ++
Sbjct: 197 GYASSRHSMSVAPIAKLPGKNGEMQRDYWYSSMRNAADLASPEAVGRYAAERTLSRLGSR 256
Query: 243 KISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHI 302
KI T +CPVLFE+PLA LL F + +SG++LYRKSTFL+DS+GK IF HI + EDP +
Sbjct: 257 KIPTTECPVLFESPLAAGLLGSFVQAVSGSALYRKSTFLLDSMGKPIFPKHIDVEEDPFV 316
Query: 303 LGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNK 362
LG GSS FD EGV+ Q R VV G ++GYFLS+YSA+KLGMKTTGN+GG+H+L++ S +
Sbjct: 317 LGGKGSSPFDEEGVRVQARKVVDAGRVEGYFLSSYSARKLGMKTTGNAGGSHNLVMTSRR 376
Query: 363 TKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISG 422
TK+ D+L MLKK+ TGL V ELMG G+NY+TGDYS+GA G+W+ENG+I + V+EITI+G
Sbjct: 377 TKAGDDLDAMLKKLGTGLFVVELMGQGVNYVTGDYSRGASGFWVENGEIAFPVDEITIAG 436
Query: 423 KLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
L+ MFK I AIG+D + T GS+LI M +AG
Sbjct: 437 NLKTMFKGIEAIGADAYNYGAKTVGSMLINRMKVAG 472
>gi|337280319|ref|YP_004619791.1| PmbA protein [Ramlibacter tataouinensis TTB310]
gi|334731396|gb|AEG93772.1| Candidate PmbA protein [Ramlibacter tataouinensis TTB310]
Length = 470
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 226/451 (50%), Positives = 315/451 (69%), Gaps = 8/451 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F YS++ F+QL L +AKK+GA+ + E +EG G SV VRKG+++ +E+N DK++ V
Sbjct: 24 FSYSRAYFEQLVDTALAHAKKLGATDAGAEASEGCGLSVSVRKGELENVERNRDKSLGVT 83
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTL---EMNPL 127
+YI G++ GN+STSDF + ++ T+ AAY+IARFTA D AGLPD + E P
Sbjct: 84 VYI--GQRR--GNASTSDFSEAAIAQTVQAAYDIARFTAEDPVAGLPDAGDIAPPEEQP- 138
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ PW + + A IA CE AF + I N+E GV+ QQSHF A++ GF GY
Sbjct: 139 DLDLFHPWDIDSERAARIALACEAAAFKTDRRITNSEGAGVSAQQSHFFSAHTRGFRGGY 198
Query: 188 PFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTR 247
S+H +S++PIA +G MQRD WYSS +L PE IG YAA+R ++RL ++KISTR
Sbjct: 199 ASSRHSVSVAPIAGRGDNMQRDAWYSSMRSADELSAPEAIGRYAAERALARLGSRKISTR 258
Query: 248 KCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFG 307
+CPVLFE+PLA LL + + SG SLYR+S+FL+DSLGK++F +H+ + EDPH G
Sbjct: 259 ECPVLFESPLAAGLLGAYVQATSGGSLYRRSSFLIDSLGKQVFPAHVDVTEDPHQKRGKG 318
Query: 308 SSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD 367
S++FD EGV+T R VV G ++GYFLS+YSA+KLGMKTTGN+GG+H+L + S T+ D
Sbjct: 319 SAAFDEEGVRTTPRKVVDAGRVEGYFLSSYSARKLGMKTTGNAGGSHNLALTSRLTQPGD 378
Query: 368 NLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNM 427
+L ML+++ TGL V ELMG G+NY+TGDYS+GA G+W+ENG+I + V+EITI+G L++M
Sbjct: 379 DLPAMLRRLGTGLFVIELMGQGVNYVTGDYSRGASGFWVENGQIAFPVQEITIAGNLKDM 438
Query: 428 FKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
F I A+G+D + T GS+L+ M +AG
Sbjct: 439 FAGIDAVGADTYNYGAKTVGSVLVNRMKVAG 469
>gi|221065820|ref|ZP_03541925.1| peptidase U62 modulator of DNA gyrase [Comamonas testosteroni KF-1]
gi|220710843|gb|EED66211.1| peptidase U62 modulator of DNA gyrase [Comamonas testosteroni KF-1]
Length = 473
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/456 (50%), Positives = 326/456 (71%), Gaps = 9/456 (1%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
++ F +S++ F+ L L++AKK+GA+ + E +EG G SV VRKG+++ +E+N DK++
Sbjct: 21 QAGFSFSQAFFEGLVDQALSHAKKLGATDAGSEASEGCGLSVSVRKGQLETVERNRDKSL 80
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM--N 125
V +Y+ G++ GN+STSDF + ++ T+ AAY+IARFTA D FA LPD + +
Sbjct: 81 GVTVYL--GQRR--GNASTSDFSEVAIKQTVQAAYDIARFTAEDPFARLPDSADIALPGT 136
Query: 126 PLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMS 185
D +L+ PW ++ + A +A RCE AF + + N+E GV+ QQSHF A+++GF
Sbjct: 137 HRDLELFHPWDITSEQAAEMALRCEEAAFKTHRRVSNSEGAGVSAQQSHFFTAHTNGFRG 196
Query: 186 GYPFSKHIISISPIA-IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAK 242
GY S+H +S++PIA + GK EMQRD WYSS + L PE +G YAA+RT+SRL ++
Sbjct: 197 GYASSRHSMSVAPIAKLPGKNGEMQRDYWYSSMRNAADLASPEAVGRYAAERTLSRLGSR 256
Query: 243 KISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHI 302
KI T +CPVLFE+PLA LL F + +SG++LYRKSTFL+DS+GK IF HI I EDP +
Sbjct: 257 KIPTIECPVLFESPLAAGLLGSFVQAVSGSALYRKSTFLLDSMGKPIFPKHIDIEEDPFV 316
Query: 303 LGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNK 362
LG GSS FD EGV+ Q R VV G ++GYFLS+YSA+KLGMKTTGN+GG+H+L++ S +
Sbjct: 317 LGGKGSSPFDEEGVRVQARKVVDAGRVEGYFLSSYSARKLGMKTTGNAGGSHNLVMTSRR 376
Query: 363 TKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISG 422
TK+ D+L MLKK+ TGL V ELMG G+NY+TGDYS+GA G+W+ENG+I + V+EITI+G
Sbjct: 377 TKAGDDLDAMLKKLGTGLFVVELMGQGVNYVTGDYSRGASGFWVENGEIAFPVDEITIAG 436
Query: 423 KLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+++MFK I AIG+D + T GSIL+ M +AG
Sbjct: 437 NMKDMFKGIEAIGADAYNYGAKTVGSILVNRMKVAG 472
>gi|418531772|ref|ZP_13097683.1| peptidase U62, modulator of DNA gyrase [Comamonas testosteroni ATCC
11996]
gi|371451274|gb|EHN64315.1| peptidase U62, modulator of DNA gyrase [Comamonas testosteroni ATCC
11996]
Length = 473
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/456 (50%), Positives = 325/456 (71%), Gaps = 9/456 (1%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
++ F +S++ F+ L L++AKK+GA+ + E +EG G SV VRKG+++ +E+N DK++
Sbjct: 21 QAGFSFSQAFFEGLVDQALSHAKKLGATDAGSEASEGCGLSVSVRKGQLETVERNRDKSL 80
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM--N 125
V +Y+ G++ GN+STSDF + ++ T+ AA++IARFTA D FA LPD + +
Sbjct: 81 GVTVYL--GQRR--GNASTSDFSEAAIKQTVQAAFDIARFTAEDPFARLPDSADIALPGT 136
Query: 126 PLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMS 185
D L+ PW ++ + A +A RCE AF + + N+E GV+ QQSHF A+++GF
Sbjct: 137 HRDLDLFHPWDITSEQAAEMALRCEEAAFKTHRRVSNSEGAGVSAQQSHFFTAHTNGFRG 196
Query: 186 GYPFSKHIISISPIA-IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAK 242
GY S+H +S++PIA + GK EMQRD WYSS + L PE +G YAA+RT+SRL ++
Sbjct: 197 GYASSRHSMSVAPIAKLPGKNGEMQRDYWYSSMRNAADLASPEAVGRYAAERTLSRLGSR 256
Query: 243 KISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHI 302
KI T +CPVLFE+PLA LL F + +SG++LYRKSTFL+DS+GK IF HI I EDP I
Sbjct: 257 KIPTTECPVLFESPLAAGLLGSFVQAVSGSALYRKSTFLLDSMGKPIFPKHIDIEEDPFI 316
Query: 303 LGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNK 362
LG GSS FD EGV+ Q R VV G ++GYFLS+YSA+KLGMKTTGN+GG+H+L++ S +
Sbjct: 317 LGGKGSSPFDEEGVRVQARKVVDAGRVEGYFLSSYSARKLGMKTTGNAGGSHNLVMTSRR 376
Query: 363 TKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISG 422
TK+ D+L MLKK+ TGL V ELMG G+NY+TGDYS+GA G+W+ENG+I + V+EITI+G
Sbjct: 377 TKAGDDLDAMLKKLGTGLFVVELMGQGVNYVTGDYSRGASGFWVENGEIAFPVDEITIAG 436
Query: 423 KLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+++MFK I AIG+D + T GSIL+ M +AG
Sbjct: 437 NMKDMFKGIEAIGADAYNYGAKTVGSILVNRMKVAG 472
>gi|332286783|ref|YP_004418694.1| hypothetical protein PT7_3530 [Pusillimonas sp. T7-7]
gi|330430736|gb|AEC22070.1| hypothetical protein PT7_3530 [Pusillimonas sp. T7-7]
Length = 455
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 219/445 (49%), Positives = 322/445 (72%), Gaps = 4/445 (0%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
++ F++L D L++AK +GAS ++ E +E G SV VR I+ +EQ D++++V ++
Sbjct: 15 QARFRELVSDALSHAKTLGASDAAAEVSESRGLSVSVRNNDIETVEQTRDRSLDVTVFA- 73
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
G++ G++STSDF ++L +T+ AA++IAR+TA+D AGLPD L + D L+ P
Sbjct: 74 -GQRR--GSASTSDFSPEALRETVEAAWHIARYTAADPAAGLPDAALLATDVPDLDLHHP 130
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
W +S ++A +A + E A ++LI N + V T + HF+L NS GFM GYP+S+H +
Sbjct: 131 WDVSAENAAKLAIQAERAARKTSTLITNTDGASVDTYEGHFVLGNSRGFMGGYPYSRHSL 190
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S++PIA +G MQRD WY++ L P +G YAA+RT++RL A++I T + PVLFE
Sbjct: 191 SVAPIAGRGVNMQRDYWYTTARAAGDLADPGAVGRYAAERTLARLSARRIKTGRFPVLFE 250
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
APLA LL + SG +LYRK++F++DSLGK + + H+ + EDP + G+ GSS+FD+E
Sbjct: 251 APLAIGLLGALVQATSGGALYRKASFMLDSLGKPVLADHLDVSEDPLVRGAMGSSAFDSE 310
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+T+ R VV GI+QGYFLSTY+A+KL M+TTGN+GG+H+L + S T+ +D+ K MLK
Sbjct: 311 GVRTKARDVVVAGILQGYFLSTYTARKLNMQTTGNAGGSHNLQLSSRLTRPNDDFKAMLK 370
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
KM TGLLVTEL+G G+NY+TGDYS+GAFGYW+E G+I+++V+E+TI+G L +M +Q+VAI
Sbjct: 371 KMGTGLLVTELIGQGVNYVTGDYSRGAFGYWVEGGEIRHAVQEVTIAGNLADMLRQVVAI 430
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
G+D +TR S T+GSILIE M IAG+
Sbjct: 431 GADTITRGSKTTGSILIEQMSIAGQ 455
>gi|171463903|ref|YP_001798016.1| peptidase U62 modulator of DNA gyrase [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171193441|gb|ACB44402.1| peptidase U62 modulator of DNA gyrase [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 448
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 231/452 (51%), Positives = 314/452 (69%), Gaps = 8/452 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F Y+ ++FQ++ ML AK+ GAS + E +EG G SV VRKG+++ IEQ+ DK + V
Sbjct: 2 FTYTSNQFQEIIDFMLKEAKRRGASDAVAEVSEGQGLSVTVRKGEVETIEQSLDKQVGVT 61
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+++ + GN+STSDF K+SL T++AA++IA+ TA D AG + LE PLD
Sbjct: 62 LFLGHHR----GNASTSDFSKESLKATVDAAFHIAQHTAEDVCAGPAEAELLEKTPLDLD 117
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
L+ PW + A IA E AF+ + I N++ V+ +HF++ SHGFM GYPFS
Sbjct: 118 LFHPWNIDAAAAVEIARSAEGAAFSVSKQIQNSDGASVSAHHAHFIMGTSHGFMGGYPFS 177
Query: 191 KHIISISPIAIKG---KEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTR 247
+H IS +PIA +G MQ D+WYSS+ P++L P IG YAA+R +SRLKA+ ++TR
Sbjct: 178 RHYISCAPIASEGGKKAHMQCDDWYSSSRIPEELADPAAIGRYAAQRALSRLKARSLTTR 237
Query: 248 KCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFG 307
+CPV+FEAPLA LL + +SG +LYR+S+FL+DSLGK++ +I + EDPH+ G
Sbjct: 238 RCPVIFEAPLAAGLLGGLVQAVSGGALYRRSSFLLDSLGKQVLPKYISLFEDPHLKSMTG 297
Query: 308 SSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD 367
S+ FD EGVKT R VV GI++GYFLSTYSA+KLGMKTTGN+GG+HHL + S KT
Sbjct: 298 SAPFDEEGVKTSARTVVDKGILEGYFLSTYSARKLGMKTTGNAGGSHHLTLQSKKTPRG- 356
Query: 368 NLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNM 427
L +LK+M TGLLVTELMG G+NY+TGDYS+GAFGYW+ENG+IQY VEE+TI+G L++M
Sbjct: 357 GLPALLKEMGTGLLVTELMGQGVNYVTGDYSRGAFGYWVENGEIQYPVEELTIAGNLRDM 416
Query: 428 FKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
I IGSD L R + +GSIL+ +M + GK
Sbjct: 417 LMDIQLIGSDTLIRGTKETGSILLGSMTVGGK 448
>gi|301631729|ref|XP_002944948.1| PREDICTED: protein pmbA-like [Xenopus (Silurana) tropicalis]
Length = 469
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 226/455 (49%), Positives = 315/455 (69%), Gaps = 9/455 (1%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S F Y++ F L L +A+K+GA+ + + +EG G SV VRKG+++ +E+N DK++
Sbjct: 18 SGFSYTQDHFADLVDQALRHARKLGATDAGADASEGCGLSVNVRKGELETVERNRDKSLG 77
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM--NP 126
V +Y+ G++ GN+STSDF + ++ T+ AAY+IARFTA D AGLPD + +
Sbjct: 78 VTVYL--GQRR--GNASTSDFSRAAIEQTVQAAYDIARFTAEDPVAGLPDSADIAAPGSH 133
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D +L+ PW ++ + A +A CE A + I N+E GV+ QQSHF A++HGF G
Sbjct: 134 RDLQLFHPWAMTSEQAAHLALECEQAALATHKRITNSEGAGVSAQQSHFFSAHTHGFRGG 193
Query: 187 YPFSKHIISISPIA-IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKK 243
Y S+H IS++PIA + G+ EMQRD WYSS + L PE +G YAA+R +SRL ++K
Sbjct: 194 YASSRHSISVAPIASLPGRHGEMQRDAWYSSQRNAADLAAPEAVGRYAAQRALSRLGSRK 253
Query: 244 ISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHIL 303
I T +CPVLFE+PLA LL F + +SG +LYRKS+FL+D+LGK +F HI I EDP I
Sbjct: 254 IPTTECPVLFESPLAAGLLGSFVQAVSGGALYRKSSFLLDTLGKPVFPPHIDITEDPFIP 313
Query: 304 GSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKT 363
G GSS FD EGV+ Q+R VV+ G +QGYFLS+YSA+KLGM+TTGN+GG+H+L + S +T
Sbjct: 314 GGKGSSPFDEEGVRVQERKVVEGGRVQGYFLSSYSARKLGMRTTGNAGGSHNLALTSRRT 373
Query: 364 KSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGK 423
+ D+L EML+K+ TGL V ELMG G+NY+TGDYS+G G+W+ENG+I + V EITI+G
Sbjct: 374 RPGDDLPEMLRKLGTGLFVIELMGQGVNYVTGDYSRGVSGFWVENGEIAFPVHEITIAGN 433
Query: 424 LQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
L+ MFK I A+G+D + T GS+LI M +AG
Sbjct: 434 LKTMFKGIEAVGADAYAYGAKTVGSVLINRMKVAG 468
>gi|319794716|ref|YP_004156356.1| peptidase u62 modulator of DNA gyrase [Variovorax paradoxus EPS]
gi|315597179|gb|ADU38245.1| peptidase U62 modulator of DNA gyrase [Variovorax paradoxus EPS]
Length = 456
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 227/450 (50%), Positives = 310/450 (68%), Gaps = 4/450 (0%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S F YS+S F+ L L +AKK+GA+ + E +EG G SV VRKG+++ +E+N DK++
Sbjct: 10 SGFAYSRSFFENLVDTALAHAKKLGATDAGAEASEGCGLSVSVRKGELENVERNRDKSLG 69
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
+ +Y+ + GN+STSDF + ++ T+ AAY+IARFTA D +GLPDE + +
Sbjct: 70 ITVYVGHRR----GNASTSDFSEGAIKQTVQAAYDIARFTAEDPVSGLPDEEDIAKEHPE 125
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
L+ PW + + A +A CE A + + I N+E GV+ QQSHF A++HGF GY
Sbjct: 126 LDLFHPWDATSEQAAKLALECEAAALSTDKRITNSEGAGVSAQQSHFFSAHTHGFRGGYA 185
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
S+H IS++PIA KG MQRD WYSS +L P+ +G YAA+R +SRLK++KI T +
Sbjct: 186 SSRHSISVAPIAGKGDNMQRDAWYSSMRSADELASPQAVGRYAAERALSRLKSRKIKTTE 245
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
CPVLFE+PLA LL + +SG +LYRKSTFL+DSLGK + HI I EDPH++ GS
Sbjct: 246 CPVLFESPLAVGLLGGLVQAVSGGALYRKSTFLLDSLGKPVLPKHIDIAEDPHVMRGKGS 305
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
S FD+EGV T+ R VV G ++GYFLSTYSA+KLGMKTTGN+GG+H+L + S TK D+
Sbjct: 306 SPFDDEGVTTRARKVVDAGRLEGYFLSTYSARKLGMKTTGNAGGSHNLTLSSRLTKHGDD 365
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
L ML K+ TGL V ELMG G+NY+TGDYS+GA G+W+E G+I + V+EITI+G L++M
Sbjct: 366 LDAMLAKLGTGLFVIELMGQGVNYVTGDYSRGASGFWVEKGRIAFPVQEITIAGNLKDML 425
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
I AIG+D T + T+GSIL+ M +AG
Sbjct: 426 MGIEAIGADAYTFGAKTTGSILVNRMKVAG 455
>gi|393775532|ref|ZP_10363845.1| peptidase, for maturation of Microcin B17 and degradation of CcdA
[Ralstonia sp. PBA]
gi|392717582|gb|EIZ05143.1| peptidase, for maturation of Microcin B17 and degradation of CcdA
[Ralstonia sp. PBA]
Length = 452
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/448 (52%), Positives = 324/448 (72%), Gaps = 4/448 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ E +Q+A D+L A+ +GA+ ++ E +EG G SV VRKG+I+ IEQN DK + V
Sbjct: 8 FAHTQDELKQMAADVLRMARALGATDAATEISEGGGLSVSVRKGEIETIEQNRDKVVGVT 67
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+ I G++ GN+STSDF +L T AAYNIARFTA D+ AGL +E LE P +
Sbjct: 68 VLI--GQRR--GNASTSDFSPAALQATAEAAYNIARFTAEDDCAGLAEEELLEQQPPELD 123
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
L+ PW + + A +A R E A + I N++ V+ Q S F+LA + GF GYP+S
Sbjct: 124 LFHPWTIDAEAAVELARRAEAAAMAVSPKIRNSDGASVSAQHSQFILATTRGFSGGYPYS 183
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS++PIA G MQRD+WY+S P L PE +G YAA R ++RL A+K++TRKCP
Sbjct: 184 RHFISVAPIAGSGNGMQRDDWYTSKRAPDDLADPEAVGRYAAARALARLNARKLATRKCP 243
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F + +SG +LYR+STFL+DSLG+++F+ H+QI E+PH+ GS+
Sbjct: 244 VLFEAPLAAGLLGAFVQAVSGGALYRRSTFLLDSLGREVFAPHVQIEENPHVSRGMGSAP 303
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T++R VV++G+++GYFLSTYSA+KLGM+TTGN+GG+H+L + S +T S D+
Sbjct: 304 FDEEGVRTRQRAVVRDGVVEGYFLSTYSARKLGMQTTGNAGGSHNLTLRSTRTASGDDFA 363
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
ML+KM TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI+G L++MF+
Sbjct: 364 AMLRKMGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITIAGNLRDMFRD 423
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IVA+G+D L R + +GSILI M +AG
Sbjct: 424 IVAVGADTLVRGTKETGSILIGQMTVAG 451
>gi|124268021|ref|YP_001022025.1| PmbA protein [Methylibium petroleiphilum PM1]
gi|124260796|gb|ABM95790.1| PmbA protein [Methylibium petroleiphilum PM1]
Length = 455
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 223/451 (49%), Positives = 308/451 (68%), Gaps = 7/451 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +S+++F+QL D L A+ +GAS ++ E +EG G SV VRKG+++ +E+N DK++ V
Sbjct: 8 FAHSRAQFEQLIDDALAVARGLGASDAAAEVSEGAGLSVSVRKGEVETVERNRDKSLGVT 67
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTL---EMNPL 127
+Y+ G++ GN+STSDF + +L T+ AAY+IARFTA D AGLPD L E
Sbjct: 68 VYL--GQRR--GNASTSDFSRAALEQTVRAAYDIARFTAEDPAAGLPDAADLATPEEAAR 123
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D LY PW + A +A RCE AF + + N++ GV+ QQSHF+ NS GF GY
Sbjct: 124 DLDLYHPWAIDAAGAIELALRCEGAAFATDRRVTNSDGCGVSVQQSHFMAGNSRGFRGGY 183
Query: 188 PFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTR 247
S+H +S++PIA +G +MQRD WYSS D +L PE +G YAA+RT++RLK +KI+T
Sbjct: 184 ASSRHSLSVAPIAGRGNDMQRDAWYSSMRDAAELASPEAVGRYAAERTLARLKGRKIATC 243
Query: 248 KCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFG 307
+ PVLFE+ LA LL + + SG +LYRK+TFL D LGK +F H+ I+E PH+L
Sbjct: 244 EVPVLFESTLAAGLLGAYVQATSGGALYRKATFLADCLGKPVFPDHVDIVEQPHLLKGKA 303
Query: 308 SSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD 367
S+ FD+EGV+T+ R VV G +GYFLS+YSA+KLGM TTG++GG+ +L + S T D
Sbjct: 304 SAPFDDEGVRTRARKVVAGGRAEGYFLSSYSARKLGMHTTGHAGGSQNLTLTSRLTAPGD 363
Query: 368 NLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNM 427
+L ML+K+ GL VTELMG G+NY+TGDYS+GA GYW+E G+I + V EITI+G L M
Sbjct: 364 DLDAMLRKLGRGLFVTELMGQGVNYVTGDYSRGAAGYWVEGGRIVHPVHEITIAGSLGEM 423
Query: 428 FKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
++IVA+G+D T T GS+LIE + IAG
Sbjct: 424 LRRIVAVGADAYTMGGKTIGSVLIERLKIAG 454
>gi|260223167|emb|CBA33458.1| Protein pmbA [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 470
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 229/453 (50%), Positives = 315/453 (69%), Gaps = 7/453 (1%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S F Y+++ F+ L +AKK+GAS + E +EG G SV VR G+++ +E+N DK++
Sbjct: 21 SGFAYTRAFFETRVDAALAHAKKLGASDAGAEVSEGCGLSVSVRNGELENVERNRDKSLG 80
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPD-ENTLEMNPL 127
V +YI + + GN+STSDF ++ T+ AAY+IARFTA D FA LPD ++ + +N
Sbjct: 81 VTVYIGNRR----GNASTSDFSDAAIEQTVRAAYDIARFTAEDPFASLPDADDIVPVNER 136
Query: 128 D--FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMS 185
+ L+ PW ++ ++A ++A CE A + I N+E V+ QQSHF A++ GF
Sbjct: 137 ERNLDLFFPWAMTSEEAAVLALECEAAALGVSKRITNSEGAAVSAQQSHFFSAHTRGFRG 196
Query: 186 GYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
GY S+H S+SPIA KGK+MQRD WYSS +L P+ +G YAA+R +SRLKA+KI+
Sbjct: 197 GYASSRHSFSVSPIAGKGKDMQRDAWYSSMRSADELASPQAVGRYAAERALSRLKARKIA 256
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
T +CPVLFE+PLA LL F + +SG +LYRKSTFL+DSLGK++ HI I EDP +L
Sbjct: 257 TVECPVLFESPLAAGLLGAFVQAVSGGALYRKSTFLLDSLGKQVLPKHIDIQEDPFVLRG 316
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
GSS FD+EGV+ + R VV G +QGYFLS+YSA+KLGM+TTGNSGG+H+L S TK+
Sbjct: 317 KGSSPFDDEGVRVRPRKVVDAGRVQGYFLSSYSARKLGMRTTGNSGGSHNLTFTSRLTKA 376
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
DNL ML+K+ TGL VTELMG G+NY+TGDYS+GA G+W+ENG+I Y V EITI+G ++
Sbjct: 377 DDNLDAMLQKLGTGLFVTELMGQGVNYVTGDYSRGASGFWVENGRIAYPVHEITIAGNMK 436
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+M K I A+G+D + T GSIL+ M +AG
Sbjct: 437 DMLKGIEAVGADTYNYGAKTVGSILLNRMKVAG 469
>gi|398810108|ref|ZP_10568938.1| putative Zn-dependent protease-like protein [Variovorax sp. CF313]
gi|398083799|gb|EJL74503.1| putative Zn-dependent protease-like protein [Variovorax sp. CF313]
Length = 456
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 224/450 (49%), Positives = 310/450 (68%), Gaps = 4/450 (0%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S F YS+S F+ L L +AKK+GA+ + E +EG G SV VRKG+++ +E+N DK++
Sbjct: 10 SGFAYSRSFFENLVDSALAHAKKLGATDAGAEASEGCGLSVSVRKGELENVERNRDKSLG 69
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
+ +Y+ + GN+STSDF ++ T+ AAY+IARFTA D +GLPDE + +
Sbjct: 70 ITVYVGHRR----GNASTSDFSDAAIKQTVQAAYDIARFTAEDPVSGLPDEEDIAKVHPE 125
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
L+ PW ++ + A +A CE A + I N+E GV+ QQSHF A++HGF GY
Sbjct: 126 LDLFHPWDVTSEQAARLALECEEAALTTDKRITNSEGAGVSAQQSHFFSAHTHGFRGGYA 185
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
S+H IS++PIA KG +MQRD WYSS +L P+ +G YAA+R +SRLK++KI T +
Sbjct: 186 SSRHSISVAPIAGKGDDMQRDAWYSSMRSAGELASPQAVGRYAAERALSRLKSRKIKTTE 245
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
CPVLFE+PLA LL + +SG +LYRKS+FL+DSLGK + H+ + EDPH++ GS
Sbjct: 246 CPVLFESPLAVGLLGGLVQAVSGGALYRKSSFLLDSLGKPVLPKHVDVAEDPHLIRGKGS 305
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
S FD+EGV T+ R VV G ++GYFLSTYSA+KLGMKTTGN+GG+H+L + S TK D+
Sbjct: 306 SPFDDEGVTTRARKVVDAGRLEGYFLSTYSARKLGMKTTGNAGGSHNLTLSSRLTKHGDD 365
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
L ML K+ TGL V ELMG G+NY+TGDYS+GA G+W+E G+I + V+EITI+G L++M
Sbjct: 366 LDAMLAKLGTGLFVIELMGQGVNYVTGDYSRGASGFWVEKGRIAFPVQEITIAGNLKDML 425
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
I AIG+D T + T+GS+L+ M IAG
Sbjct: 426 MGIEAIGADAYTFGAKTTGSVLVNRMKIAG 455
>gi|91789147|ref|YP_550099.1| microcin-processing peptidase 1 [Polaromonas sp. JS666]
gi|91698372|gb|ABE45201.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Polaromonas sp. JS666]
Length = 476
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/450 (50%), Positives = 318/450 (70%), Gaps = 4/450 (0%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S F Y + F++L L++AKK+GAS ++ E +EG G SV VRKG+++ +E+N DK++
Sbjct: 30 SGFSYHRDFFEELVDTALDHAKKLGASDAAAEASEGCGLSVSVRKGELENVERNRDKSLG 89
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
+ +YI GKK GN++TSDF K ++ T+ AAY+IARFTA D +GLPD+ +
Sbjct: 90 ITVYI--GKKR--GNAATSDFSKAAIQQTVKAAYDIARFTAEDETSGLPDDRDIAREYPA 145
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
L+ PW ++ ++A +A +CE A + LI N+E GV+ QQSHF A++ GF GY
Sbjct: 146 LDLFHPWAITSEEAAHLALQCEAAAMGTSRLITNSEGAGVSAQQSHFFSAHTKGFRGGYA 205
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
S+H IS++PIA KG +MQRD WYSS D +L +PE +G YAA+R ++RL+++KI T +
Sbjct: 206 SSRHSISVAPIAGKGNQMQRDAWYSSMRDANELARPEAVGRYAAERALARLRSRKIPTTQ 265
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
CPVLFE+PLA LL F + +SG +LYRKSTFL +SLGK F HI I EDPH++ GS
Sbjct: 266 CPVLFESPLAAGLLGGFVQAVSGGALYRKSTFLANSLGKAAFPRHIDIYEDPHLMKGKGS 325
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
+ FD EGVKT R VV G ++GYFLSTYSA+KLGM+TTGN+GG+H+L + S T++ D+
Sbjct: 326 APFDEEGVKTSARRVVDAGRVEGYFLSTYSARKLGMRTTGNAGGSHNLTLTSRHTRTGDD 385
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
L ML+K+ GL VTELMG G+NY+TGDYS+GA G+W+ENG+I + VEEITI+G L+ M
Sbjct: 386 LDAMLRKLGRGLFVTELMGQGVNYVTGDYSRGASGFWVENGRIAFPVEEITIAGNLKAML 445
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
I A+G+D+ T S + GS+L+ M +AG
Sbjct: 446 MGIEAVGADMYTYGSKSVGSMLVNRMKVAG 475
>gi|241763469|ref|ZP_04761522.1| peptidase U62 modulator of DNA gyrase [Acidovorax delafieldii 2AN]
gi|241367310|gb|EER61641.1| peptidase U62 modulator of DNA gyrase [Acidovorax delafieldii 2AN]
Length = 495
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/457 (50%), Positives = 317/457 (69%), Gaps = 13/457 (2%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S F YS+ F+ L L +AKK+GA+ + E +EG G SV VRKG+++ +E+N DK++
Sbjct: 44 SGFSYSRPFFEALVDRALAHAKKLGATDAGAEASEGCGLSVSVRKGELENVERNRDKSLG 103
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
V +YI + + GN+STSDF K++ T+ AAY+IARFTA D AGLPDE ++ P D
Sbjct: 104 VTVYIGNRR----GNASTSDFSDKAIEQTVQAAYDIARFTAEDPMAGLPDE--ADIAPAD 157
Query: 129 ----FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
L+ PW ++ ++A +A CE AF + I N+E GV+ QQSHF A++ GF
Sbjct: 158 THRDLDLFHPWAITSEEAAQLAKACEAAAFKTHRRITNSEGAGVSAQQSHFFSAHTRGFR 217
Query: 185 SGYPFSKHIISISPIA-IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKA 241
GY S+H S+SPIA + G+ EMQRD WYSS D +L PE +G YAA+R +SRL +
Sbjct: 218 GGYASSRHSFSVSPIASLPGRNAEMQRDAWYSSMRDAAELASPEAVGRYAAQRALSRLGS 277
Query: 242 KKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPH 301
+KI T +CPVLFE+ LA LL F + ISG +LYRKS+FL+DSLGK +F HI I+EDP
Sbjct: 278 RKIPTTQCPVLFESSLAAGLLGGFVQAISGGALYRKSSFLLDSLGKMVFPKHIDILEDPF 337
Query: 302 ILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISN 361
+L GSS FD EGV+ R VV+ G +QGYFLS+YSA+KLGMKTTGN+GG+H+L++ S
Sbjct: 338 VLRGKGSSPFDEEGVRVAPRKVVQGGRVQGYFLSSYSARKLGMKTTGNAGGSHNLVMASC 397
Query: 362 KTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITIS 421
T++SD+L ML+K+ TGL V ELMG G+NY+TGDYS+GA G+W+ENG+I + V EITI+
Sbjct: 398 LTQASDDLDAMLQKLGTGLFVVELMGQGVNYVTGDYSRGASGFWVENGRIAFPVHEITIA 457
Query: 422 GKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
G L+ MFK I A+G+D + T GS+L+ M +AG
Sbjct: 458 GNLKEMFKGIEAVGADAYNYGAKTVGSVLVNRMKVAG 494
>gi|383757377|ref|YP_005436362.1| protein TldE [Rubrivivax gelatinosus IL144]
gi|381378046|dbj|BAL94863.1| protein TldE [Rubrivivax gelatinosus IL144]
Length = 459
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 221/454 (48%), Positives = 311/454 (68%), Gaps = 10/454 (2%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F Y + +FQQ+ D+L+ AKK+GAS + +E +EG G SV VRKG+++ +E+N DK++ V
Sbjct: 9 FAYRREQFQQIVDDVLSRAKKLGASDAGVEVSEGVGLSVSVRKGELENVERNQDKSLGVS 68
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDEN---TLEMNPL 127
IY+ + GN+STSDF ++ T+ AAY+IARFTA D AGLPDE T E
Sbjct: 69 IYLGHRR----GNASTSDFSPAAIQRTVQAAYDIARFTAEDPVAGLPDEQDLATAEEAAR 124
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ PW + A +A RCE AF + I N+E GV+ QQSHF N+ GF GY
Sbjct: 125 DLDLFHPWAIDAAGAAELARRCEAAAFAVDRRITNSEGAGVSAQQSHFWAGNTRGFRGGY 184
Query: 188 PFSKHIISISPIA-IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
S+H +S++PIA + G+ +MQRD WYSS D +L PE +G YAA+R +SRLK++++
Sbjct: 185 ASSRHYLSVAPIASLPGRRHDMQRDAWYSSMRDASELASPEAVGRYAAERALSRLKSRRV 244
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
+T + PVLFE+ +A LL + + SG +LYRK++FL LG+K+ +H+ I+EDPH
Sbjct: 245 ATAEVPVLFESTVAAGLLGAYVQATSGGALYRKASFLHGCLGEKVLPAHVDIVEDPHAAK 304
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
GS+ FD+EGV+T R VV G++QGYFLS+YSA+KLG++TTGN+GG+H+L + S T+
Sbjct: 305 GKGSAPFDDEGVRTSGRRVVDAGVVQGYFLSSYSARKLGLRTTGNAGGSHNLAMTSRLTQ 364
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
D+L ML+++ GL VTELMG G+NY+TGDYS+GA GYW+E+G+I + V E+TI+G L
Sbjct: 365 PGDDLDAMLRRLGRGLFVTELMGQGLNYVTGDYSRGAAGYWVEDGRIAFPVHEVTIAGNL 424
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+ M I AIGSDV + S GS+LIE M +AG
Sbjct: 425 REMLAGIAAIGSDVYVQGSKAVGSVLIERMKLAG 458
>gi|451936690|ref|YP_007460544.1| PmbA protein [Candidatus Kinetoplastibacterium oncopeltii TCC290E]
gi|451777613|gb|AGF48588.1| PmbA protein [Candidatus Kinetoplastibacterium oncopeltii TCC290E]
Length = 446
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 235/445 (52%), Positives = 331/445 (74%), Gaps = 5/445 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
K F++L + L AKKIGA+ S E +EG G SV VRKG ++ IE+++D+ +NV+++
Sbjct: 5 KEHFKELIERSLKSAKKIGANESCAEISEGRGLSVSVRKGNVETIEKSHDRMLNVVVF-- 62
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
DGKK G++STSDF +++ T+ AA++IAR+TA D+ +GLPDE L DFKLY
Sbjct: 63 DGKKS--GSASTSDFSFEAINKTVEAAWHIARYTAIDDASGLPDEILLAKKFRDFKLYHL 120
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
W S+++ IA + E A NF++ IVN + + V++ QS+ LL NS GF+ +S++ +
Sbjct: 121 WSKSVEEMISIAKQTEEAAINFSNSIVNTDGSFVSSGQSYSLLGNSFGFLGSRIYSQYSL 180
Query: 195 SISPIAIKGK-EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLF 253
S+ PIA K MQRD WY +NS+P L P IG YAA+R ++RL A++I+T PV+F
Sbjct: 181 SVVPIACGNKGNMQRDYWYDANSNPLNLSDPSYIGKYAAERAVARLSARRIATGNFPVIF 240
Query: 254 EAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDN 313
EAP+A L+ F + SG +LYRK++FL D+LGK IF H+ IIEDPHI G+ GS+SFD+
Sbjct: 241 EAPVALGLIGSFVQAASGGALYRKASFLTDTLGKHIFPKHVDIIEDPHIEGAMGSTSFDS 300
Query: 314 EGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEML 373
EGV T+ R VV +G++ GYFLS+YSA+KLG+ TTGN+GG+H+L + S+KTK +D+LK M+
Sbjct: 301 EGVSTKMRSVVSSGVLNGYFLSSYSARKLGLITTGNAGGSHNLRMFSSKTKDNDDLKSMI 360
Query: 374 KKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVA 433
K+M+ GLL+TEL+G GINY+TGDYS+GAFG+WIENG+IQ++VEEITI+G L +MFKQI+
Sbjct: 361 KQMDKGLLITELIGHGINYVTGDYSRGAFGFWIENGEIQHAVEEITIAGNLMDMFKQIIL 420
Query: 434 IGSDVLTRNSNTSGSILIENMIIAG 458
IGSDV++R + T+GS+LIENM IAG
Sbjct: 421 IGSDVISRGTKTTGSVLIENMSIAG 445
>gi|365097203|ref|ZP_09331448.1| microcin-processing peptidase 1 [Acidovorax sp. NO-1]
gi|363413497|gb|EHL20693.1| microcin-processing peptidase 1 [Acidovorax sp. NO-1]
Length = 480
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 234/455 (51%), Positives = 317/455 (69%), Gaps = 13/455 (2%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F YS++ F+ L L +AKK+GA+ + E +EG G SV VRKG+++ +E+N DK++ V
Sbjct: 31 FSYSRAFFEDLVDRALAHAKKLGATDAGAEASEGCGLSVSVRKGELENVERNRDKSLGVT 90
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD-- 128
+Y+ GK+ GN+STSDF K++ T+ AAY+IARFTA D AGLPD + ++ P D
Sbjct: 91 VYL--GKRR--GNASTSDFSNKAIEQTVQAAYDIARFTAEDPMAGLPDAD--DIAPADTH 144
Query: 129 --FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
+L+ PW ++ ++A IA CE A + I N+E GV+ QQSHF A++ GF G
Sbjct: 145 RDLQLFHPWAITSEEAADIARACEAAALKTHRRITNSEGAGVSAQQSHFFSAHTRGFRGG 204
Query: 187 YPFSKHIISISPIA-IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKK 243
Y S+H S++PIA + GK EMQRD WYSS D +L PE +G YAA+R +SRL ++K
Sbjct: 205 YASSRHSFSVAPIASLPGKNAEMQRDAWYSSMRDAAELASPEAVGRYAAQRALSRLGSRK 264
Query: 244 ISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHIL 303
I T +CPVLFE+ LA LL F + +SG SLYRKS+FL+DSLGK +F HI I+EDP IL
Sbjct: 265 IPTTQCPVLFESTLAAGLLGGFVQAVSGGSLYRKSSFLLDSLGKMVFPKHIDILEDPFIL 324
Query: 304 GSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKT 363
GSS FD EGV+ R VVK G ++GYFLS+YSA+KLGMKTTGN+GG+H+L++ S T
Sbjct: 325 RGKGSSPFDEEGVRVAPRKVVKGGRVEGYFLSSYSARKLGMKTTGNAGGSHNLVMTSRLT 384
Query: 364 KSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGK 423
++ DNL ML+K+ TGL V ELMG G+NY+TGDYS+GA G+W+ENGKI + V EITI+G
Sbjct: 385 QAGDNLDAMLQKLGTGLFVVELMGQGVNYVTGDYSRGASGFWVENGKIAFPVHEITIAGN 444
Query: 424 LQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
L++M K I A+G+D + T GSIL+ M +AG
Sbjct: 445 LKDMLKGIEAVGADAYNYGAKTVGSILVNRMKVAG 479
>gi|451812458|ref|YP_007448912.1| PmbA protein [Candidatus Kinetoplastibacterium galatii TCC219]
gi|451778360|gb|AGF49308.1| PmbA protein [Candidatus Kinetoplastibacterium galatii TCC219]
Length = 446
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 234/445 (52%), Positives = 328/445 (73%), Gaps = 5/445 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
K FQ++ + LN AKK+GAS S E +EG G SV VRKG ++ IE+++D+ +NV+++
Sbjct: 5 KEHFQEIIERSLNSAKKLGASQSCAEISEGKGLSVSVRKGNVETIEKSHDRMLNVVVF-- 62
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
DGKK G++STSDF ++L T+ AA++IA++TA+D+ AGLPD+N L DFKLY
Sbjct: 63 DGKKS--GSASTSDFSFEALGRTVEAAWHIAKYTANDDAAGLPDKNLLAKESRDFKLYHL 120
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
W S+++ +A + E A FN IVN + + ++ QS+ LL N+ GF +S++ +
Sbjct: 121 WSKSVEEMTSLAKQTEEAAMGFNGSIVNTDGSFASSSQSYSLLGNTFGFFGSRMYSQYGL 180
Query: 195 SISPIAIKGK-EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLF 253
S+ PIA MQRD WY SN +P L P IG YAA+R I+RL A++I+T PV+F
Sbjct: 181 SVMPIASDNNGNMQRDYWYDSNCNPLNLSDPVYIGKYAAERAIARLSARRIATGNFPVIF 240
Query: 254 EAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDN 313
EAP+A L+ F + SG +LYR ++FL DSLGK IFS HI IIEDPHI G+ GS+SFD+
Sbjct: 241 EAPVALGLIGSFVQAASGGALYRNASFLTDSLGKNIFSEHIDIIEDPHIDGAMGSTSFDS 300
Query: 314 EGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEML 373
EGV T +R +V G++ GYFLS+YSA+KLG+ TTGN+GG+H+L + S+KTK +D+L+ M+
Sbjct: 301 EGVSTTRRSIVSKGVLNGYFLSSYSARKLGLSTTGNAGGSHNLRMFSSKTKETDDLRSMI 360
Query: 374 KKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVA 433
KKMN GLLVTEL+G GINY+TGDYS+GAFG+W+ENG+IQ++VEEITI+G L++MFKQI+
Sbjct: 361 KKMNKGLLVTELIGQGINYVTGDYSRGAFGFWVENGEIQHAVEEITIAGNLRDMFKQILL 420
Query: 434 IGSDVLTRNSNTSGSILIENMIIAG 458
+GSD+++R + T+GS+LIENM IAG
Sbjct: 421 VGSDIISRGTKTTGSVLIENMSIAG 445
>gi|163854896|ref|YP_001629194.1| hypothetical protein Bpet0591 [Bordetella petrii DSM 12804]
gi|163258624|emb|CAP40923.1| conserved hypothetical protein [Bordetella petrii]
Length = 506
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 312/443 (70%), Gaps = 4/443 (0%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ F +L + L +A++IGAS ++ E +E G SV VRK I+ +EQ D+++++ +Y
Sbjct: 67 ARFSELVEQALAHARRIGASDAAAEVSESLGLSVSVRKDDIETVEQTRDRSLDLTVYAGQ 126
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
+ G++STSDF + +L T+ AA++IAR TA+D AGLPD + L + D L+ W
Sbjct: 127 SR----GSASTSDFSEAALRQTVEAAWHIARHTAADPAAGLPDADQLAADIPDLALHYGW 182
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
++ + A +A R E A + I N + V T + F++ N+ GF+ GYP+S+H +S
Sbjct: 183 PVTTEQAAELALRAERAARAVDPRITNTDGATVGTYEGQFVMGNTRGFLGGYPYSRHSLS 242
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
++PIA +G MQRD WY+S DP +L PE IG YA +RT+SRL A++I T K PVLFEA
Sbjct: 243 VAPIAGRGNHMQRDYWYTSERDPARLASPEAIGRYAGERTLSRLSARRIRTGKFPVLFEA 302
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
PLA LL F + SG +LYRK++FLVD+LGK +F HI I EDPH+ G GSS FD+EG
Sbjct: 303 PLALGLLGAFTQATSGGALYRKASFLVDALGKPVFPDHIDISEDPHVRGGMGSSPFDDEG 362
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T+ R VV G+++GYFLS+Y+A+KLG+ TTGN+GG+H+L + S T+ D+ + ML+K
Sbjct: 363 VRTRARSVVTGGVLEGYFLSSYTARKLGLVTTGNAGGSHNLTLSSRHTRPGDDFEAMLRK 422
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
+ TG LVTEL+G G+NY+TGDYS+GAFGYW+ENG+IQ++V+EITI+G L MF+QIVA+G
Sbjct: 423 LGTGFLVTELIGQGVNYVTGDYSRGAFGYWVENGQIQHAVQEITIAGNLAEMFRQIVAVG 482
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
+D + R + +GSILIE M IAG
Sbjct: 483 ADTIARGTKRTGSILIEQMAIAG 505
>gi|456063782|ref|YP_007502752.1| peptidase U62 modulator of DNA gyrase [beta proteobacterium CB]
gi|455441079|gb|AGG34017.1| peptidase U62 modulator of DNA gyrase [beta proteobacterium CB]
Length = 448
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 235/452 (51%), Positives = 312/452 (69%), Gaps = 8/452 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F YS ++FQ++ ML AK+ GAS + E +EG G SV VRKG+++ IEQ+ DK + V
Sbjct: 2 FTYSSNQFQEIIDFMLTEAKRRGASDAVAEVSEGQGLSVTVRKGEVETIEQSLDKQVGVT 61
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+++ + GN+STSDF K SL T+ AAY+IA+ TA D AG ++ LE +PLD
Sbjct: 62 VFLGHRR----GNASTSDFSKDSLRATVEAAYHIAQHTAEDPCAGPAEKGLLEKHPLDLD 117
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
L+ PW L A IA E AF + I N++ V+ +HF++ SHGFM GYPFS
Sbjct: 118 LFHPWDLDSATAIDIARAAEGAAFAVSKQIQNSDGASVSAHHAHFMMGTSHGFMGGYPFS 177
Query: 191 KHIISISPIAIKGKE---MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTR 247
+H IS +PIA +G + MQRD+WYSS+ P +L P IG YAA+R +SRLKA+ ++TR
Sbjct: 178 RHYISCAPIASEGGKKSLMQRDDWYSSSRIPGELADPAAIGKYAAERALSRLKARSLTTR 237
Query: 248 KCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFG 307
+CPV+FEAPLA LL + +SG +LYR+S+FL+DSLGK++ H+ + E+PH+ G
Sbjct: 238 RCPVIFEAPLAAGLLGGLVQAVSGGALYRRSSFLLDSLGKQVLPKHVSLFENPHLKAMTG 297
Query: 308 SSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD 367
S+ FD EGVKT R VV GI+QGYFLSTYSA+KLGMKTTGN+GG+HHL + S KT
Sbjct: 298 SAPFDEEGVKTSARTVVDKGILQGYFLSTYSARKLGMKTTGNAGGSHHLTLQSRKTPKG- 356
Query: 368 NLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNM 427
L +LK+M TGLLVTELMG G+NY+TGDYS+GAFGYW+ENG+IQY VE ITI+ L++M
Sbjct: 357 GLPALLKEMGTGLLVTELMGQGVNYVTGDYSRGAFGYWVENGEIQYPVEGITIASNLRDM 416
Query: 428 FKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
I IGSD L R + +GSILI +M + GK
Sbjct: 417 LMDIQMIGSDSLIRGTKETGSILIGSMTVGGK 448
>gi|351729224|ref|ZP_08946915.1| microcin-processing peptidase 1 [Acidovorax radicis N35]
Length = 480
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 232/455 (50%), Positives = 314/455 (69%), Gaps = 13/455 (2%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F YS++ F+ L L +AKK+GA+ + E +EG G SV VRKG+++ +E+N DK++ V
Sbjct: 31 FSYSRAFFEDLVDRALAHAKKLGATDAGAEASEGCGLSVSVRKGELENVERNRDKSLGVT 90
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD-- 128
+Y+ + + GN+STSDF K++ T+ AAY+IARFTA D AGLPD + ++ P D
Sbjct: 91 VYLGNRR----GNASTSDFSNKAIEQTVQAAYDIARFTAEDPVAGLPDAD--DIAPADTH 144
Query: 129 --FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
L+ PW ++ ++A IA CE A + I N+E GV+ QQSHF A++ GF G
Sbjct: 145 RDLDLFHPWAITSEEAAEIAKACEAAALKTHRRITNSEGAGVSAQQSHFFSAHTRGFRGG 204
Query: 187 YPFSKHIISISPIA-IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKK 243
Y S+H S++PIA + G+ EMQRD WYSS D +L PE +G YAA+R +SRL ++K
Sbjct: 205 YASSRHSFSVAPIASLPGRNAEMQRDAWYSSMRDATELASPEAVGRYAAQRALSRLGSRK 264
Query: 244 ISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHIL 303
I T +CPVLFE+ LA LL F + +SG SLYRKS+FL+DSLGK +F HI I+EDP +L
Sbjct: 265 IPTTQCPVLFESTLAAGLLGGFVQAVSGGSLYRKSSFLLDSLGKMVFPKHIDILEDPFVL 324
Query: 304 GSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKT 363
GSS FD EGV+ R VV+ G +QGYFLS+YSA+KLGMKTTGN+GG+H+L + S T
Sbjct: 325 RGKGSSPFDEEGVRVAPRKVVQGGRVQGYFLSSYSARKLGMKTTGNAGGSHNLTMTSRLT 384
Query: 364 KSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGK 423
+S DNL ML+K+ TGL V ELMG G+NY+TGDYS+GA G+W+ENGKI Y V EITI+G
Sbjct: 385 QSGDNLDAMLQKLGTGLFVVELMGQGVNYVTGDYSRGASGFWVENGKIAYPVHEITIAGN 444
Query: 424 LQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
L++M K I A+G+D + T GSIL+ M +AG
Sbjct: 445 LKDMLKGIEAVGADAYNYGAKTVGSILVNRMKVAG 479
>gi|160897764|ref|YP_001563346.1| peptidase U62 modulator of DNA gyrase [Delftia acidovorans SPH-1]
gi|333915933|ref|YP_004489665.1| peptidase U62 modulator of DNA gyrase [Delftia sp. Cs1-4]
gi|160363348|gb|ABX34961.1| peptidase U62 modulator of DNA gyrase [Delftia acidovorans SPH-1]
gi|333746133|gb|AEF91310.1| peptidase U62 modulator of DNA gyrase [Delftia sp. Cs1-4]
Length = 469
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 229/455 (50%), Positives = 313/455 (68%), Gaps = 9/455 (1%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S F YS+ F+ L L +AKK+GA+++ E +EG G SV VRKG ++ +E+N DK++
Sbjct: 18 SGFSYSQPFFEDLVDRALVHAKKLGATNAGAEASEGCGLSVSVRKGALETVERNRDKSLG 77
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM--NP 126
V +Y+ + + GN+STSDF ++ T+ AAY+IARFTA D AGLPD +
Sbjct: 78 VTVYLGNRR----GNASTSDFSDAAIQQTVQAAYDIARFTAEDPMAGLPDAADIAQPGTH 133
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D +L+ PW L+ + A +A +CE A + I N+E GV+ QQSHF A+++GF G
Sbjct: 134 RDLQLFHPWDLTSEAAAELALQCEEAALRTHKRITNSEGAGVSAQQSHFFSAHTNGFRGG 193
Query: 187 YPFSKHIISISPIA-IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKK 243
Y S+H +S++PIA + G+ EMQRD WYSS + L PE +G YAA+R +SRL ++K
Sbjct: 194 YASSRHSLSVAPIASLPGRNGEMQRDAWYSSMRNAADLASPEAVGRYAAQRALSRLGSRK 253
Query: 244 ISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHIL 303
I T +CPVLFE+ LA LL F + +SG +LYR+STFL+DSLGK +F HI I EDP IL
Sbjct: 254 IPTTECPVLFESTLAAGLLGSFVQAVSGGALYRRSTFLLDSLGKPVFPKHIDITEDPFIL 313
Query: 304 GSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKT 363
G GSS FD EGV+ Q R VV G ++GYFLS+YSA+KLGMKTTGN+GG+H+L++ S +T
Sbjct: 314 GGKGSSPFDEEGVRVQARKVVDAGRVEGYFLSSYSARKLGMKTTGNAGGSHNLVMTSRRT 373
Query: 364 KSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGK 423
K+ D+L MLKK+ TGL V ELMG G+NY+TGDYS+G G+W+ENG+I + V EITI+G
Sbjct: 374 KAGDDLPAMLKKLGTGLFVIELMGQGVNYVTGDYSRGVSGFWVENGEIAFPVHEITIAGN 433
Query: 424 LQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
L++M K I A+G+D + T GSILI M +AG
Sbjct: 434 LKDMLKGIEAVGADAYNYGAKTVGSILINRMKVAG 468
>gi|171057908|ref|YP_001790257.1| peptidase U62 modulator of DNA gyrase [Leptothrix cholodnii SP-6]
gi|170775353|gb|ACB33492.1| peptidase U62 modulator of DNA gyrase [Leptothrix cholodnii SP-6]
Length = 474
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/451 (51%), Positives = 311/451 (68%), Gaps = 7/451 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F YS+ +FQQL +D L A+++GAS + +E +EG G SV VRKG+I+ +E+N DK + V
Sbjct: 27 FAYSREQFQQLVEDSLALARELGASDAGVEVSEGAGLSVSVRKGEIENVERNRDKAIGVT 86
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL--- 127
+YI G++ GN+STSDF +L T+ AAY+IARFTA D+ AGLPD L +
Sbjct: 87 VYI--GQRR--GNASTSDFAPAALRQTVQAAYDIARFTAEDSAAGLPDAADLALGDAAVR 142
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ PW + A IA RCE A + + I N+E V+ QQSHF NS GF GY
Sbjct: 143 DLGLFHPWAIDAQTASEIALRCEAAALSVDKRITNSEGAAVSAQQSHFFAGNSRGFRGGY 202
Query: 188 PFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTR 247
S+H +S+SPIA +G++MQRD WYSS D L PE +G YAA+R +SRLK++KI T
Sbjct: 203 SSSRHSLSVSPIAGRGRDMQRDAWYSSMRDALDLSSPESVGRYAAERALSRLKSRKIKTC 262
Query: 248 KCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFG 307
+ PVLFEAP+A LL + SG SLYRK++FL DSLG+ IF SHI + EDPHI G
Sbjct: 263 EVPVLFEAPVAAGLLGAYVNGTSGGSLYRKASFLQDSLGQAIFPSHIDVREDPHIPKGKG 322
Query: 308 SSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD 367
S+ FD+EGV T+ R VV+ G+ GYFLS+YSA+KLGM TTG++GG+ +L + S T+ D
Sbjct: 323 SAPFDDEGVLTRARTVVEAGVTLGYFLSSYSARKLGMHTTGHAGGSQNLTLTSRLTRRGD 382
Query: 368 NLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNM 427
+L ML+K++ GL V ELMG G+NY+TGDYS+GA G+W+ENG+I + VEEITI+G L++M
Sbjct: 383 DLPAMLRKLHRGLFVVELMGQGVNYVTGDYSRGAAGFWVENGEIAFPVEEITIAGNLRDM 442
Query: 428 FKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+IVA+G+D S T GS+L+E M IAG
Sbjct: 443 LARIVAVGADTYNAGSKTMGSVLVERMTIAG 473
>gi|395007227|ref|ZP_10390992.1| putative Zn-dependent protease-like protein [Acidovorax sp. CF316]
gi|394314775|gb|EJE51639.1| putative Zn-dependent protease-like protein [Acidovorax sp. CF316]
Length = 476
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/453 (49%), Positives = 311/453 (68%), Gaps = 9/453 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F YS+ F++L L +AKK+GA+ + E +EG G SV VRKG+++ +E+N DK++ +
Sbjct: 27 FSYSRPFFEELVDRALAHAKKLGATDAGAEASEGCGLSVSVRKGELETVERNRDKSLGIT 86
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL--D 128
+YI + + GN+STSDF K++ T AAY+IARFTA D AGLPD + + D
Sbjct: 87 VYIGNRR----GNASTSDFSSKAIEQTAQAAYDIARFTAEDPMAGLPDADDIAPTDTHRD 142
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
L+ PW + + A IA CE A + I N+E GV+ QQSHF A++ GF GY
Sbjct: 143 LDLFHPWSIDSEQAAKIAMECEAAALKSSRRITNSEGAGVSAQQSHFFSAHTRGFRGGYA 202
Query: 189 FSKHIISISPIA-IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
S+H S++PIA + G+ EMQRD WYSS D +L P+ +G YAA+R +SRL ++KI
Sbjct: 203 SSRHSFSVAPIASLPGRNAEMQRDAWYSSMRDAAELASPQAVGRYAAQRALSRLGSRKIP 262
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
T +CPVLFE+ LA LL F + +SG +LYRKS+FL+DSLGK++F HI I EDP IL
Sbjct: 263 TTQCPVLFESTLAAGLLGGFVQAVSGGALYRKSSFLLDSLGKRVFPKHIDIEEDPFILRG 322
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
GSS FD+EGV+ R VVK G ++GYFLSTYSA+KLGMKTTGN+GG+H+L + S T++
Sbjct: 323 KGSSPFDDEGVRVAPRKVVKGGRVEGYFLSTYSARKLGMKTTGNAGGSHNLTMTSRLTQA 382
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
SD+L ML+K+ TGL V E+MG G+NY+TGDYS+GA G+W+ENG+I Y V EITI+G L+
Sbjct: 383 SDDLDAMLQKLGTGLFVIEVMGQGVNYVTGDYSRGASGFWVENGRIAYPVHEITIAGNLK 442
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+M + I A+G+D + + GSIL+ M +AG
Sbjct: 443 DMLQGIEAVGADTYNYGAKSVGSILVNRMKVAG 475
>gi|347819182|ref|ZP_08872616.1| microcin-processing peptidase 1 [Verminephrobacter aporrectodeae
subsp. tuberculatae At4]
Length = 470
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/458 (48%), Positives = 315/458 (68%), Gaps = 13/458 (2%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S F S+ F++L L +AKK+GAS + E +EG G SV VR+G ++ +E+N DK+++
Sbjct: 19 SGFSCSRPFFEELVDRALAHAKKLGASDAGAEASEGCGLSVSVRRGALENVERNRDKSLS 78
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
V +YI G++ GN+STSDF K++ T+ AAY+IARFTA D AGLPD ++ P D
Sbjct: 79 VSVYI--GRRR--GNASTSDFSGKAVEQTVQAAYDIARFTAEDPMAGLPD--AADIAPQD 132
Query: 129 ----FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
L+ PW + + A +A CE A + + N+E GV+ Q SHF A++ GF
Sbjct: 133 SHRELDLFHPWAIDSEAAAGLAMECEAAAMQTSRRVTNSEGAGVSAQHSHFFSAHTRGFR 192
Query: 185 SGYPFSKHIISISPIA-IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKA 241
GY S+H IS++PIA + G+ EMQRD WY S D L P +G YAA+R +SRL +
Sbjct: 193 GGYAASRHGISVAPIASLPGRRVEMQRDAWYGSMRDAAALPAPRAVGRYAAERALSRLGS 252
Query: 242 KKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPH 301
+KI+T +CPVLFE+PLA LL F + +SG +LYR+S+FL+D+LGK++F HI I+EDP
Sbjct: 253 RKIATTQCPVLFESPLAAGLLGGFVQAVSGGALYRRSSFLIDALGKRVFPGHIDILEDPF 312
Query: 302 ILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISN 361
+ G GS+ FD+EGV+ R VV+ G +QGYFLS+YSA+KLGMKTTGN+GG+H+L++ S
Sbjct: 313 VPGGKGSAPFDDEGVRVAPRKVVEGGRVQGYFLSSYSARKLGMKTTGNAGGSHNLVLTSR 372
Query: 362 KTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITIS 421
T+++D+L ML+K+ GL V ELMG G+N +TGDYS+GA G+W+ENG+I Y V EITI+
Sbjct: 373 LTQAADDLDAMLRKLGNGLFVIELMGQGVNQVTGDYSRGASGFWVENGRIAYPVHEITIA 432
Query: 422 GKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
G L++MF+ I A+G+D + T GSIL+ M +AG+
Sbjct: 433 GNLKDMFRGIEAVGADAYNYGAKTVGSILVNRMKVAGR 470
>gi|375106974|ref|ZP_09753235.1| putative Zn-dependent protease-like protein [Burkholderiales
bacterium JOSHI_001]
gi|374667705|gb|EHR72490.1| putative Zn-dependent protease-like protein [Burkholderiales
bacterium JOSHI_001]
Length = 457
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/451 (49%), Positives = 310/451 (68%), Gaps = 7/451 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F YS +F+ L + L AK++GAS ++ E +EG G SV VRKG+++ +E+N DK++ V
Sbjct: 10 FAYSPEQFKSLVDETLGLAKRLGASDAAAEVSEGVGLSVSVRKGEVENVERNRDKSIGVT 69
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTL---EMNPL 127
+Y+ G++ GN+STSDF +L T+ AAY+IARFTA D AGLPD L E
Sbjct: 70 VYL--GQRR--GNASTSDFSSAALAQTVRAAYDIARFTAEDPAAGLPDAADLATPEEATR 125
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ PW L+ + A ++ RCE AF+ + I N+E GV+ QQSHF NS GF G+
Sbjct: 126 DLDLFHPWDLTGEMAAELSRRCEQAAFDTDRRITNSEGAGVSAQQSHFWAGNSRGFRGGF 185
Query: 188 PFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTR 247
S+H IS++PIA +G M+RD WYSS D +L PE +G YAA+R++SRL A+KISTR
Sbjct: 186 ASSRHSISVAPIAGRGSLMERDAWYSSMRDAHELATPEAVGRYAAERSLSRLNARKISTR 245
Query: 248 KCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFG 307
+ PVLFE LA LL + + SG +LYRK+TFL DSLG+++ +SHI I EDPH+
Sbjct: 246 EVPVLFENTLAAGLLGAYVQATSGGALYRKATFLPDSLGQQVLASHIDIDEDPHLPKGKA 305
Query: 308 SSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD 367
S+ FD+EGV+T KR VV G++QG+FLS+YSA+KLG +TTG++GG+ +L + S T+ D
Sbjct: 306 SAPFDDEGVRTTKRRVVDAGVVQGWFLSSYSARKLGKRTTGHAGGSQNLRLSSRHTQPGD 365
Query: 368 NLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNM 427
+L ML+K+ GL VTELMG G+NY+TGDYS+GA GYW+E G+I + V EITI+G L++M
Sbjct: 366 DLPAMLRKLGRGLFVTELMGQGVNYVTGDYSRGASGYWVEGGRIVHPVHEITIAGNLKDM 425
Query: 428 FKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+ I A+G+D T T G++L+ M +AG
Sbjct: 426 LRSIEAVGADEYTTGGKTLGTVLLGRMKLAG 456
>gi|119899084|ref|YP_934297.1| PmbA protein [Azoarcus sp. BH72]
gi|119671497|emb|CAL95410.1| probable PmbA protein [Azoarcus sp. BH72]
Length = 446
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/449 (50%), Positives = 316/449 (70%), Gaps = 8/449 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +S+++ +++A D+L YA+K GA+ + +EG G SV VRKG++D IE N DK + V
Sbjct: 6 FSFSQAQLREIAADILKYARKRGATACETDVSEGFGQSVAVRKGEVDTIEYNRDKGIGVT 65
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
IY+ G++ Y +STSDF K +L T++AA +IA FTA D AGL D + + + D
Sbjct: 66 IYL--GQQRGY--ASTSDFSKAALKATVDAAVSIAGFTAPDPCAGLADASLMAQDMPDLD 121
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
L+ PW + +DDA +A RCE AF + I N+E V+ QQS F+ ANSHGFM GY +
Sbjct: 122 LFHPWKIGVDDAIGLARRCEEAAFAVSPKITNSEGANVSIQQSQFVSANSHGFMGGYATT 181
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H +S S IA +G MQR+ WY S D L PE +G A +R ISRL AKKI T + P
Sbjct: 182 RHGLSCSVIAGEGDGMQREYWYDSRRDAADLISPEEVGRIAGERAISRLGAKKIRTCEVP 241
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+FEAPLA LL F + +SG SLYRKS+FL+DSLG+++FS + I E PH+ +FG+S
Sbjct: 242 VIFEAPLAIALLGNFVQAVSGGSLYRKSSFLLDSLGQQVFSPVVTIAERPHLKKAFGTSW 301
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD++GV T+ R VV +G++QGYFLSTYSA+KLGM+TTGN+GG+H+L + T +D+
Sbjct: 302 FDSDGVATRDRDVVVDGVLQGYFLSTYSARKLGMQTTGNAGGSHNLTV----TPGTDDFA 357
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
++K+M GL+VTEL+G G+NY+TGDYS+GA GYW+E GKI+++VEE+TI+G L++MF+
Sbjct: 358 GLIKRMERGLIVTELLGHGVNYVTGDYSRGAAGYWVEKGKIKHAVEEVTIAGNLRDMFRN 417
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVA+G+D L R + GS+LIE M IAG+
Sbjct: 418 IVAVGNDALPRGAKHCGSLLIERMKIAGR 446
>gi|332526712|ref|ZP_08402814.1| PmbA protein [Rubrivivax benzoatilyticus JA2]
gi|332111115|gb|EGJ11147.1| PmbA protein [Rubrivivax benzoatilyticus JA2]
Length = 459
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 215/454 (47%), Positives = 311/454 (68%), Gaps = 10/454 (2%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F Y + +FQQ+ D+L AKK+GAS + +E +EG G SV VR G+++ +E+N DK++ V
Sbjct: 9 FAYRRDQFQQIVDDVLAQAKKLGASDAGVEVSEGVGLSVSVRMGELENVERNQDKSLGVS 68
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDEN---TLEMNPL 127
+Y+ + GN+STSDF ++ T+ AAY+IARFTA D AGLPDE T +
Sbjct: 69 VYLGHRR----GNASTSDFSPAAISRTVQAAYDIARFTAEDPVAGLPDEQDLATADEAAR 124
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ PW + A +A RCE AF + I N+E GV+ QQSHF N+ GF GY
Sbjct: 125 DLDLFHPWDIDAAGAAELARRCEAAAFAVDRRITNSEGAGVSAQQSHFWAGNTRGFRGGY 184
Query: 188 PFSKHIISISPIA-IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
S+H +S++PIA + G+ +MQRD WYSS + +L PE +G YAA+R +SRLK++++
Sbjct: 185 ASSRHYLSVAPIASLPGRRHDMQRDAWYSSMRNAAELASPEAVGRYAAERALSRLKSRRV 244
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
+T + PVLFE+ +A LL + + SG +LYRK++FL LG+K+ +H+ I+EDPH
Sbjct: 245 ATAEVPVLFESAVAAGLLGAYVQATSGGALYRKASFLHGCLGEKVLPAHVDIVEDPHAAK 304
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
GS+ FD+EGV+T R VV G++QGYFLS+YSA+KLG++TTGN+GG+H+L + S T+
Sbjct: 305 GKGSAPFDDEGVRTTGRRVVDAGVVQGYFLSSYSARKLGLRTTGNAGGSHNLAMSSRLTQ 364
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
D+L ML+++ GL VTELMG G+NY+TGDYS+GA G+W+E+G+I + V E+TI+G L
Sbjct: 365 PGDDLDTMLRRLGRGLFVTELMGQGVNYVTGDYSRGAAGFWVEDGRIAFPVHEVTIAGNL 424
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+ M IVAIGSDV + S + GS+L++ M +AG
Sbjct: 425 REMLAGIVAIGSDVYEQGSKSVGSVLLDRMKLAG 458
>gi|121611177|ref|YP_998984.1| peptidase U62, modulator of DNA gyrase [Verminephrobacter eiseniae
EF01-2]
gi|121555817|gb|ABM59966.1| microcin-processing peptidase 1. Unknown type peptidase. MEROPS
family U62 [Verminephrobacter eiseniae EF01-2]
Length = 481
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/455 (49%), Positives = 313/455 (68%), Gaps = 9/455 (1%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S F YS+ F++L L +AKK+GA+ ++ E +EG G SV VRKG+++ +E+N DK++
Sbjct: 30 SGFSYSRPFFEELVDRALAHAKKLGATDAAAEASEGCGLSVSVRKGELENVERNRDKSLG 89
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTL--EMNP 126
V +Y+ + G +STSDF +++ T+ AAY+IARFTA D AGLPDE + +
Sbjct: 90 VTVYMAHRR----GQASTSDFSTRAIEQTVQAAYDIARFTAEDPMAGLPDEADIAPPASH 145
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D L+ PW ++ ++A +A CE A + I N+E V+ QQSHF A++ GF G
Sbjct: 146 RDLALFHPWPITSEEAARLALECEAAALQTSRRISNSEGASVSAQQSHFFSAHTRGFRGG 205
Query: 187 YPFSKHIISISPIA-IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKK 243
Y S+H +S++PIA + GK EMQRD WYSS D +L P+ IG YAA+R +SRL ++K
Sbjct: 206 YASSRHSVSVAPIAKLPGKNAEMQRDAWYSSMRDAARLASPQAIGRYAAERALSRLGSRK 265
Query: 244 ISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHIL 303
I+T +CPVLFEA LA LL F + ISG++LYRKS+FL +SLGK IF HI I+EDP +
Sbjct: 266 IATTQCPVLFEATLAAGLLGGFVQAISGSALYRKSSFLPNSLGKMIFPLHIDILEDPFVP 325
Query: 304 GSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKT 363
G GS+ FD+EGV+ R VVK+G +QGYFLS YSA+KLG++TTGN+GG+H+L + S T
Sbjct: 326 GGKGSAPFDDEGVRVAPRKVVKHGRVQGYFLSCYSARKLGLQTTGNAGGSHNLTLTSRLT 385
Query: 364 KSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGK 423
+ D+L ML+K+ TGL V ELMG G+N +TGDYS+GA G+W+E G+I Y V EITI+G
Sbjct: 386 QPGDDLDAMLQKLGTGLFVIELMGQGLNPVTGDYSRGASGFWVERGQIAYPVHEITIAGN 445
Query: 424 LQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
L+NM + I A+G+D + T GSIL+E M +AG
Sbjct: 446 LKNMLRGIAAVGADAYNYGAKTVGSILVERMKVAG 480
>gi|120610757|ref|YP_970435.1| microcin-processing peptidase 1 [Acidovorax citrulli AAC00-1]
gi|120589221|gb|ABM32661.1| microcin-processing peptidase 1 [Acidovorax citrulli AAC00-1]
Length = 485
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/453 (48%), Positives = 310/453 (68%), Gaps = 9/453 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F YS+ F++L L +A ++GA+ + E +EG G SV VRKG+++ +E+N DK++ +
Sbjct: 36 FSYSRGVFEELVDRALAHALRLGATDAGAEASEGFGLSVSVRKGELETVERNRDKSLGIT 95
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPD--ENTLEMNPLD 128
+Y+ + + GN+STSDF ++++ T+ AAY+IARFTA D AGLPD + +
Sbjct: 96 VYVGNRR----GNASTSDFSERAIEQTVQAAYDIARFTAEDPVAGLPDVADVAAPGTHRE 151
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
L+ PW ++ ++A IA CE+ A + I N+E V+ QQSHF A++HGF GY
Sbjct: 152 LDLFHPWAITSEEAARIALECEDAALRTHRRITNSEGAAVSAQQSHFFSAHTHGFRGGYA 211
Query: 189 FSKHIISISPIA-IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
S+H IS++PIA + G+ EMQRD WYSS D +L P +G YAA+R +SRL ++KI
Sbjct: 212 SSRHSISVAPIASLPGRNAEMQRDAWYSSMRDAAELSSPAAVGRYAAERALSRLGSRKIP 271
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
T +CPVLFE+PLA LL F + +SG +LYRKS+FL+DSLG+++F HI I EDP +
Sbjct: 272 TTECPVLFESPLAAGLLGGFTQAVSGGALYRKSSFLLDSLGRRVFPDHIDIDEDPFVARG 331
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
GSS FD EGV+ R VV G +QGYFLS+YSA+KLGMKTTGN+GG+H+L + S T+
Sbjct: 332 KGSSPFDEEGVRVAPRKVVDAGEVQGYFLSSYSARKLGMKTTGNAGGSHNLALTSRLTQP 391
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
D+L MLKK+ TGL V ELMG G+NY+TGDYS+GA G+W+ENG+I + V EITI+G L+
Sbjct: 392 GDDLDAMLKKLGTGLFVIELMGQGVNYVTGDYSRGASGFWVENGEIAFPVHEITIAGNLK 451
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+MF I A+G+D + T GS+L+ M +AG
Sbjct: 452 DMFLGIEAVGADAYNYGAKTVGSVLVNRMKVAG 484
>gi|326317881|ref|YP_004235553.1| peptidase U62 modulator of DNA gyrase [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323374717|gb|ADX46986.1| peptidase U62 modulator of DNA gyrase [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 484
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/453 (48%), Positives = 311/453 (68%), Gaps = 9/453 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F YS+ F++L L +A ++GA+ + E +EG G SV VRKG+++ +E+N DK++ +
Sbjct: 35 FSYSRGVFEELVDRALAHALRLGATDAGAEASEGCGLSVSVRKGELETVERNRDKSLGIT 94
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM--NPLD 128
+Y+ + + GN+STSDF ++++ T+ AAY+IARFTA D AGLPD + + +
Sbjct: 95 VYVGNRR----GNASTSDFSERAIEQTVQAAYDIARFTAEDPVAGLPDVSDVAAPGTHRE 150
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
L+ PW ++ ++A IA CE+ A + I N+E V+ QQSHF A++HGF GY
Sbjct: 151 LDLFHPWAITSEEAARIALECEDAALRTHRRITNSEGAAVSAQQSHFFSAHTHGFRGGYA 210
Query: 189 FSKHIISISPIA-IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
S+H IS++PIA + G+ EMQRD WYSS D +L P +G YAA+R +SRL ++KI
Sbjct: 211 SSRHSISVAPIASLPGRNAEMQRDAWYSSMRDAAELSSPAAVGRYAAERALSRLGSRKIP 270
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
T +C VLFE+PLA LL F + +SG +LYRKS+FL+DSLG+++F HI I EDP +
Sbjct: 271 TTECAVLFESPLAAGLLGGFTQAVSGGALYRKSSFLLDSLGRRVFPEHIDIDEDPFVARG 330
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
GSS FD EGV+ R VV G +QGYFLS+YSA+KLGMKTTGN+GG+H+L++ S T+
Sbjct: 331 KGSSPFDEEGVRVAPRKVVDAGEVQGYFLSSYSARKLGMKTTGNAGGSHNLVLTSRLTQP 390
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
D+L MLKK+ TGL V ELMG G+NY+TGDYS+GA G+W+ENG+I + V EITI+G L+
Sbjct: 391 GDDLDAMLKKLGTGLFVIELMGQGVNYVTGDYSRGASGFWVENGEIAFPVHEITIAGNLK 450
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+MF I A+G+D + T GS+L+ M +AG
Sbjct: 451 DMFLGIEAVGADAYNYGAKTVGSLLVNRMKVAG 483
>gi|407940211|ref|YP_006855852.1| microcin-processing peptidase 1 [Acidovorax sp. KKS102]
gi|407898005|gb|AFU47214.1| microcin-processing peptidase 1 [Acidovorax sp. KKS102]
Length = 480
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/457 (51%), Positives = 318/457 (69%), Gaps = 13/457 (2%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S F YS+ F++L L +AKK+GA+ + E +EG G SV VRKG+++ +E+N DK++
Sbjct: 29 SGFSYSRPFFEELVDRALAHAKKLGATDAGAEASEGCGLSVSVRKGELENVERNRDKSLG 88
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
V +YI + GN+STSDF K++ T+ AAY+IARFTA D AGLPD + ++ P D
Sbjct: 89 VTVYIGHRR----GNASTSDFSTKAIEQTVQAAYDIARFTAEDPVAGLPDAD--DIAPAD 142
Query: 129 ----FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
+L+ PW ++ ++A +A CE AF + I N+E GV+ QQSHF A++ GF
Sbjct: 143 THRDLQLFHPWAITSEEAAEMAMACEAAAFKTHRRITNSEGAGVSAQQSHFFSAHTRGFR 202
Query: 185 SGYPFSKHIISISPIA-IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKA 241
GY S+H S++PIA + GK EMQRD WYSS + L PE +G YAA+R +SRL +
Sbjct: 203 GGYASSRHSFSVAPIASLPGKNGEMQRDAWYSSMRNAADLASPEAVGRYAAQRALSRLGS 262
Query: 242 KKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPH 301
+KI T +CPVLFE+ LA LL F + ISG SLYRKS+FL+DSLGK +F HI I+EDP
Sbjct: 263 RKIPTTQCPVLFESTLASGLLGGFVQAISGGSLYRKSSFLLDSLGKMVFPKHIDILEDPF 322
Query: 302 ILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISN 361
ILG GSS FD EGV+ R VVK G ++GYFLS+YSA+KLGMKTTGN+GG+H+L++ S
Sbjct: 323 ILGGKGSSPFDEEGVRVAPRKVVKGGRVEGYFLSSYSARKLGMKTTGNAGGSHNLVMTSR 382
Query: 362 KTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITIS 421
T++SDNL ML+K+ TGL V ELMG G+NY+TGDYS+GA G+W+ENGKI + V EITI+
Sbjct: 383 LTQASDNLDAMLQKLGTGLFVVELMGQGVNYVTGDYSRGASGFWVENGKIAFPVHEITIA 442
Query: 422 GKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
G L++M K I A+G+D + T GSIL+ M +AG
Sbjct: 443 GNLKDMLKGIEAVGADAYNYGAKTVGSILVNRMKVAG 479
>gi|348617892|ref|ZP_08884426.1| Protein pmbA [Candidatus Glomeribacter gigasporarum BEG34]
gi|347816836|emb|CCD29080.1| Protein pmbA [Candidatus Glomeribacter gigasporarum BEG34]
Length = 451
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 218/448 (48%), Positives = 313/448 (69%), Gaps = 4/448 (0%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ + +++A +L A + GAS +++E +EG+GFSV VR+G ++ IE++ D+ V
Sbjct: 8 FPHTQDQLKEIAAGILRCAAQGGASSAAVEISEGSGFSVTVRRGALETIERHRDQAAGVT 67
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
I+I + G++ST+D S+ T+ AA + AR A D AGL D + LE P
Sbjct: 68 IWIGTRR----GDASTNDLSPDSIQSTVAAAIDFARHAAEDACAGLADAHCLEGAPPALD 123
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
L+ PW + + A +A R E AF+ + I N+E V Q F+LA SHGF++GYP+S
Sbjct: 124 LFHPWRIDTEAAAELARRAEQAAFDAGARIRNSEGATVCAQHGQFVLATSHGFLAGYPYS 183
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS +PIA G+ MQRD W SS + +L PE +G YAA+R ++RL+ + +S R CP
Sbjct: 184 RHSISCAPIAQHGQHMQRDGWSSSKRNATELAMPEAVGRYAAERALARLQPRALSARACP 243
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA LL F R +SG +LYR+++FLVD LG++IF+ HIQI E PH + G++
Sbjct: 244 VLFEAPLAAGLLGAFVRAVSGVALYRRASFLVDRLGERIFAPHIQIHEAPHQPRAMGAAP 303
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV+T+ R VV++GI+QGYFLSTYSA+KLGM+TTGN+GGAH L + S T+ D+L+
Sbjct: 304 FDQEGVRTRARDVVRDGIVQGYFLSTYSARKLGMQTTGNAGGAHQLALRSAHTRDKDDLR 363
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
MLKK++TGLL+TE+MG G+NY+TGDYS+GA G+W+E G+IQY VE IT++G L+ MFK
Sbjct: 364 AMLKKLDTGLLLTEVMGQGVNYVTGDYSRGAVGFWVERGEIQYPVEGITVAGNLKQMFKD 423
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IVA+G+DV ++ +GS+LIE M +AG
Sbjct: 424 IVAVGADVYANSAKETGSVLIEKMTVAG 451
>gi|451813181|ref|YP_007449634.1| PmbA protein [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
gi|451779150|gb|AGF50030.1| PmbA protein [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
Length = 446
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/445 (51%), Positives = 323/445 (72%), Gaps = 5/445 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
K FQ L + L A ++GA+ S E + G SV VRKG ++ IE+++D+ +N++++
Sbjct: 5 KEHFQDLIERSLKSANRLGANQSYAEISTVKGLSVSVRKGCVETIEKSHDRMLNIVVF-- 62
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
DGKK G++STSDF +L T+ AA++IAR+TA D +GLP+E+ L DFKLY
Sbjct: 63 DGKKS--GSASTSDFSPDALSKTVEAAWHIARYTAIDEASGLPEEDLLAKEFRDFKLYHL 120
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
W S++D IA + E A NF++ IVN + + V + QS+ LL N+ GF S++ +
Sbjct: 121 WSKSVEDMISIAKQTEEAAINFSNRIVNTDGSFVNSSQSYSLLGNTFGFFGSRISSQYSL 180
Query: 195 SISPIAIKGK-EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLF 253
S+ PIA + MQRD WY SN +P L P IG YAA+R+I+RL A++IST PV+F
Sbjct: 181 SVMPIAGDNQGNMQRDYWYDSNCNPLNLSDPVHIGKYAAERSIARLSARRISTGNFPVIF 240
Query: 254 EAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDN 313
EAP+A L+ F + SG +LYR ++FL SLGK +FS+HI IIEDPHI G+ GS+SFD+
Sbjct: 241 EAPVALGLIGSFVQAASGGALYRNASFLTGSLGKSVFSNHIDIIEDPHIDGAIGSTSFDS 300
Query: 314 EGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEML 373
EGV T KR VV G+I GYFLS+YSA+KLG+ TTGN+GG+H++ +IS+KTK +D+L M+
Sbjct: 301 EGVSTIKRSVVSKGVINGYFLSSYSARKLGLSTTGNAGGSHNICMISSKTKKTDDLMSMI 360
Query: 374 KKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVA 433
K+MN GLL+TEL+G G+NY+TGDYS+GAFG+W+ENG+IQ++V+EITI+G L++MF+QI+
Sbjct: 361 KRMNRGLLITELIGQGVNYVTGDYSRGAFGFWVENGEIQHAVQEITIAGNLRDMFRQILL 420
Query: 434 IGSDVLTRNSNTSGSILIENMIIAG 458
IGSDV++R + T+GS+LIENM IAG
Sbjct: 421 IGSDVISRGTKTTGSVLIENMSIAG 445
>gi|334132117|ref|ZP_08505878.1| Protein pmbA [Methyloversatilis universalis FAM5]
gi|333442763|gb|EGK70729.1| Protein pmbA [Methyloversatilis universalis FAM5]
Length = 446
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/452 (50%), Positives = 317/452 (70%), Gaps = 8/452 (1%)
Query: 7 NRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
+R F ++ + + +AQ +L++A+ GAS + ++ +EG G SV VR+G+++ IE N DK
Sbjct: 2 SRQGFSHTDASLRNIAQQLLDHARAGGASAAEVDVSEGFGQSVTVRRGEVETIEYNRDKG 61
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ V +Y+ G++ Y +S+SDF ++ T++AA +IARFTA D+ AGLPD++ L
Sbjct: 62 IGVTVYV--GQRRGY--ASSSDFSLDAMRATVDAALSIARFTAEDDAAGLPDKSLLANEF 117
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D LY PW L ++ A IA RCE+ AF + I N+E V+ QQS F+ ANS GFM+G
Sbjct: 118 RDLDLYHPWDLPVETAIDIARRCEDAAFAVSPDIRNSEGASVSAQQSQFVSANSLGFMAG 177
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
Y S+ +S S IA +G MQR++WY+S L E IG YAA+R +SRL A+++ T
Sbjct: 178 YASSRQYVSCSVIAGEGDGMQREDWYASRRAAGDLPPAEAIGEYAARRALSRLDARRVRT 237
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
+ PVLFEAPLA LL F + SG +LYRKS+FL+DSLGK+IF HI I E PH+ +
Sbjct: 238 TRVPVLFEAPLAIGLLGHFVQAASGGALYRKSSFLLDSLGKQIFPKHINISERPHLPRAM 297
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
GS FD++GV T+ R VV+NG++ GYFLSTYSA+KLGM+TTGN+GG+H+LI+ S T+S
Sbjct: 298 GSGMFDDDGVATRDREVVENGVLNGYFLSTYSARKLGMQTTGNAGGSHNLILQSG-TQSL 356
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
D+L +K+ GLLVTEL+G G+NY+TGDYS+GA GYWIENG+I Y V+EITI+G L++
Sbjct: 357 DDLIRGIKR---GLLVTELLGHGVNYVTGDYSRGAAGYWIENGEIAYPVQEITIAGNLRD 413
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
MFK I A+GSD L R S SGS+LI+ M IAG
Sbjct: 414 MFKGIQAVGSDALVRGSKQSGSVLIDRMRIAG 445
>gi|89901658|ref|YP_524129.1| peptidase U62, modulator of DNA gyrase [Rhodoferax ferrireducens
T118]
gi|89346395|gb|ABD70598.1| microcin-processing peptidase 1. Unknown type peptidase. MEROPS
family U62 [Rhodoferax ferrireducens T118]
Length = 468
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/451 (50%), Positives = 311/451 (68%), Gaps = 7/451 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F YS+S F+ L L +AKK+GAS + E +EG G SV VRKG+++ +E+N DK++ V
Sbjct: 21 FSYSRSFFEGLVDSALAHAKKLGASDAGAEASEGCGLSVSVRKGELENVERNRDKSLVVT 80
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM---NPL 127
+Y G++ GN+STSDF ++ T+ AAY+IARFTA D FA LPD +
Sbjct: 81 VY--SGQRR--GNASTSDFSHVAIEQTVQAAYDIARFTAEDPFAALPDVQDIAQPSEQRT 136
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ PW ++ + A IA CE A + I N+E V+ QQSHF A++HGF GY
Sbjct: 137 DLDLFFPWVINSEQAAAIAMACEAAAVQTDKRITNSEGAAVSAQQSHFFSAHTHGFRGGY 196
Query: 188 PFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTR 247
S+H +S+SPIA KG MQRD WYSS + +L PE +G YAA R +SRL ++KI+T
Sbjct: 197 ASSRHSLSVSPIAGKGSGMQRDAWYSSQRNADELASPEAVGRYAAARALSRLNSRKIATT 256
Query: 248 KCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFG 307
+CPVLFE+PLA LL F + ISG SLYRKS+FL+DSLG+++ + HI I+EDP + G
Sbjct: 257 ECPVLFESPLAAGLLGSFVQAISGGSLYRKSSFLLDSLGQQVLAKHIDILEDPFVKRGKG 316
Query: 308 SSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD 367
SS FD+EGV+ + R VV+ G +QGYFL +YSA+KLGMKTTGN+GG+H+LI+ S T+ D
Sbjct: 317 SSPFDDEGVRVKARQVVQAGRVQGYFLGSYSARKLGMKTTGNAGGSHNLILTSRLTRPGD 376
Query: 368 NLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNM 427
+L ML+K+ TGL VTELMG G+NY+TGDYS+GA G+W+E G+I Y V EITI+G +++M
Sbjct: 377 DLNAMLEKLGTGLFVTELMGSGVNYVTGDYSRGASGFWVEKGRIAYPVHEITIAGNMRDM 436
Query: 428 FKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
K I A+G+D + T GS+L++ M +AG
Sbjct: 437 LKGITAVGADTYNYGAKTIGSVLVDRMKVAG 467
>gi|388569764|ref|ZP_10156151.1| microcin-processing peptidase 1 [Hydrogenophaga sp. PBC]
gi|388263054|gb|EIK88657.1| microcin-processing peptidase 1 [Hydrogenophaga sp. PBC]
Length = 468
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/459 (49%), Positives = 316/459 (68%), Gaps = 15/459 (3%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F YS+ +F++L L +AK +GA+ ++ E +EG G SV VRK +++ +E+N DK++ V
Sbjct: 13 FQYSRHQFEELVDLALTHAKSLGAADAAAEVSEGAGLSVSVRKAELENVERNRDKSLGVT 72
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTL--EMNPL- 127
+Y+ G++ GN+STSDF ++ T+ AAY+IARFTA D AGLPD + E + L
Sbjct: 73 VYL--GQRR--GNASTSDFSAAAVRQTVQAAYDIARFTAEDPVAGLPDAQDVAAEADRLR 128
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHG----- 182
D L+ PW ++ + A +A CE AF + I N+E V+ QQSHF A+ G
Sbjct: 129 DLDLFHPWAITSEQAAELALACEAAAFATSKQITNSEGASVSAQQSHFFGAHMRGGQRGG 188
Query: 183 ---FMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRL 239
F GY S+H +S++PIA KG +MQRD WYSS P+ L PE++G YAA+R +SRL
Sbjct: 189 KGIFSGGYASSRHSLSVAPIAGKGAQMQRDYWYSSMRAPQDLASPEVVGRYAAERALSRL 248
Query: 240 KAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIED 299
+A+KI+T +CPVLFE+PLA LL F + ISG +LYRK++FL DSLGK ++H+ I ED
Sbjct: 249 RARKIATTECPVLFESPLAAGLLGAFVQAISGGALYRKTSFLADSLGKSAMAAHLDIDED 308
Query: 300 PHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIII 359
P + G GSS FD+EGV+T+ R VV G++QGYFLSTYSA+KLGM+TTGN+GG+H+L +
Sbjct: 309 PFVRGGKGSSPFDDEGVQTRARRVVDGGVVQGYFLSTYSARKLGMRTTGNAGGSHNLTLT 368
Query: 360 SNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEIT 419
S +T++ D+L MLKK+ GL VTELMG G+N +TGDYS+GA GYW+ENG I Y V+EIT
Sbjct: 369 SRRTQAGDDLDAMLKKLGRGLFVTELMGQGVNPVTGDYSRGASGYWVENGVIAYPVQEIT 428
Query: 420 ISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
I+G L++M I A+G+D + T GS+L+ M +AG
Sbjct: 429 IAGNLRDMLMGIEAVGADAYNYGAKTVGSVLVNRMKVAG 467
>gi|394989256|ref|ZP_10382090.1| peptidase U62, modulator of DNA gyrase [Sulfuricella denitrificans
skB26]
gi|393791675|dbj|GAB71729.1| peptidase U62, modulator of DNA gyrase [Sulfuricella denitrificans
skB26]
Length = 460
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/450 (50%), Positives = 308/450 (68%), Gaps = 8/450 (1%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S+F +S Q+ +D+L+ +K GA+ E ++G G +V VR+G+++ IE N DK +
Sbjct: 18 SRFSHSIETLSQITRDILSQSKLAGATACEAEVSQGFGQNVSVRRGEVETIEYNRDKGLG 77
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
V +Y D + G++STSD +++ DT+ AA +IAR+TASD FAGL DEN L D
Sbjct: 78 VTVYFGDKR----GHASTSDLSPQAIKDTVAAAVSIARYTASDEFAGLADENLLAREIPD 133
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
LY PW LS++ A A CE AF + I N+E V+TQ+S F+ NS GF++GYP
Sbjct: 134 LSLYHPWDLSVEQAIEQAKTCEAAAFAVDKRIDNSEGASVSTQESLFMYGNSLGFLAGYP 193
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
S+H IS + IA MQRD WYSS D L+ ++G A +RT+ RL A+KI T +
Sbjct: 194 SSRHDISCAVIAEDDGGMQRDYWYSSRRDATDLETAAVVGRKAGERTVRRLAARKIKTTE 253
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
CPVLFEAP+A L+ +SG SLYRKS+FL+DSLG+++F+ +QI E PHIL S
Sbjct: 254 CPVLFEAPIASGLIGHLVGAVSGGSLYRKSSFLLDSLGQQVFAPFVQIRELPHILKGLAS 313
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
S FDNEGV T++R ++K+G++QGYFL +YSA+KLGM +TGN+GG H+LII S S +
Sbjct: 314 SPFDNEGVATRERDLIKDGVLQGYFLGSYSARKLGMTSTGNAGGNHNLIIES----SGQD 369
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
+ +LK M GL+VTEL+G GIN +TGDYS+GA GYW+ENG+IQY VEEITI+G L++MF
Sbjct: 370 FEGLLKMMGKGLVVTELLGHGINPVTGDYSRGAAGYWVENGEIQYPVEEITIAGNLKDMF 429
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
KQI A+GSD+L + S GS+LIE M +AG
Sbjct: 430 KQITAVGSDILVQGSKQCGSVLIERMTVAG 459
>gi|257092194|ref|YP_003165835.1| peptidase U62 modulator of DNA gyrase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044718|gb|ACV33906.1| peptidase U62 modulator of DNA gyrase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 459
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/453 (50%), Positives = 307/453 (67%), Gaps = 11/453 (2%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S+F + Q+LA+D+L YA K GAS ++ ++G G SV VR G+++ IE N DK++
Sbjct: 14 SRFSHRFETLQELARDVLVYAAKQGASACEVDVSDGFGQSVTVRCGEVETIEYNRDKSIA 73
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP-- 126
V +Y+ K G +STSDF +L +T++AA NIARFTA+D AGLPD + L +
Sbjct: 74 VSVYLDQRK----GQASTSDFSPTALRETVDAALNIARFTAADPCAGLPDASLLATDTGS 129
Query: 127 -LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMS 185
LY PW LS++ A +A RCE AF + I N+E V+ Q+ F+ ANS GFM
Sbjct: 130 LPGLDLYHPWLLSVEAAVDLARRCEQAAFALSPQISNSEGATVSIQEGQFVSANSLGFMG 189
Query: 186 GYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
GYP S+H +S S IA + MQRD+WYS D + PE IG AA+R +SRL A+K+
Sbjct: 190 GYPTSRHYLSCSVIAGENDAMQRDDWYSIARDQAAIASPESIGERAAQRALSRLGARKVK 249
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
T + PVLFEAPLA L+ F SG SLYRK++FLVDSLGK++FS +QI E PH+ +
Sbjct: 250 TCRVPVLFEAPLAPSLIGSFVHAASGGSLYRKTSFLVDSLGKRVFSKKVQISERPHLPRA 309
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
S+ FD++GV T R VV+NG +QGYFLSTY+ +KLGM TTGN+GG+H+LII K
Sbjct: 310 LASTYFDSDGVATHDREVVRNGRLQGYFLSTYTGRKLGMPTTGNAGGSHNLIIHPGKR-- 367
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
+ + +LKKM GLLVTEL+G G+NY+TGDYS+GA G+WIE+G+I + VEEITI+G L+
Sbjct: 368 --DFRGLLKKMGRGLLVTELLGHGVNYVTGDYSRGAAGFWIEDGEIAHPVEEITIAGNLR 425
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+MF+ + A+G+DVL R S GS+LIE M +AG
Sbjct: 426 DMFRNVAAVGNDVLVRGSKHVGSLLIEQMKVAG 458
>gi|358636053|dbj|BAL23350.1| Zn-dependent protease, modulator of DNA gyrase [Azoarcus sp. KH32C]
Length = 446
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/448 (49%), Positives = 308/448 (68%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +S S+ Q++A ++L+YA+K GA+ + +EG G S VRKG++D IE N DK + V
Sbjct: 6 FSFSASQLQEMAGNILDYARKRGATACETDVSEGFGHSATVRKGEVDTIEYNRDKGIGVT 65
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ + G++STSDF + +L T++AA +IARFTA D AGL D + + D
Sbjct: 66 VYLGQQR----GHASTSDFTRDALEATVDAALSIARFTAPDPCAGLADAALMARDCPDLD 121
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW S++D+ + A RCE AF + I N+E V+TQ+SHF+ ANS GFM GY S
Sbjct: 122 LYHPWRPSVEDSIITARRCEEAAFAVSPKITNSEGASVSTQESHFVSANSAGFMGGYASS 181
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H +S S IA +G MQR+ WY S D +L + +G AA+R ++RL A+KI T + P
Sbjct: 182 RHSVSCSVIAGEGDGMQREYWYDSRRDASELMAADAVGQRAAERALARLGARKIKTCEAP 241
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA L+ F SG SLYRKS+FL+DSLG+ +FS + I E PH+ +FGSS
Sbjct: 242 VLFEAPLAVALIGNFVHATSGGSLYRKSSFLLDSLGQPVFSPIVNISERPHVPKAFGSSP 301
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD++GV T R VV +GI++GYFLSTYSA+KLG++TTGN+GG+H+LI+ S +
Sbjct: 302 FDSDGVATHDRDVVVDGILRGYFLSTYSARKLGLQTTGNAGGSHNLIVRSGDM----DFA 357
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
++K M GL+VTEL+G G+NY+TGDYS+GA G+W+E GKI++ VEEITI+G L++MF+
Sbjct: 358 ALVKHMERGLVVTELLGHGVNYVTGDYSRGAAGFWVEKGKIKHPVEEITIAGNLRDMFRG 417
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IVAIG+D L R + GS+LIE M IAG
Sbjct: 418 IVAIGNDALPRGAKHCGSLLIERMKIAG 445
>gi|332528706|ref|ZP_08404683.1| peptidase U62, modulator of DNA gyrase [Hylemonella gracilis ATCC
19624]
gi|332041772|gb|EGI78121.1| peptidase U62, modulator of DNA gyrase [Hylemonella gracilis ATCC
19624]
Length = 464
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/467 (48%), Positives = 314/467 (67%), Gaps = 13/467 (2%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIE 60
M +S F YS++ F+ L L +AKK+GAS + E +EG G SV VR+G+++ +E
Sbjct: 1 MNSTTTPQSGFSYSRATFESLVDQALAHAKKLGASAAGAEVSEGCGLSVSVRQGELENVE 60
Query: 61 QNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDEN 120
+N DK++ V +Y+ G++ GN+STSDF ++ T+ AAY+IARFTA D AGLPD +
Sbjct: 61 RNRDKSLGVTVYL--GQRR--GNASTSDFSLAAIEQTVQAAYDIARFTAEDPAAGLPDGD 116
Query: 121 T---LEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLL 177
L D L+ PW ++ + A IA E AF + I N+E V+ QQSHF
Sbjct: 117 DVVGLAEAGRDLDLFHPWAITSEQASDIARAAEAAAFKTDKRITNSEGASVSAQQSHFFS 176
Query: 178 AN------SHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYA 231
A+ + F GY S+H +S+SPIA +G MQRD WYSS P +L PE IG YA
Sbjct: 177 AHRAMDGSAPDFRGGYASSRHTVSVSPIAGRGDGMQRDYWYSSQRHPDELAAPEAIGRYA 236
Query: 232 AKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFS 291
A+R +SRLKA+KISTR+ PVLFE+PLA LL + +SG +LYRKS+FL+DSLGK++
Sbjct: 237 AERALSRLKARKISTREVPVLFESPLAAGLLGALVQALSGGALYRKSSFLLDSLGKQVLP 296
Query: 292 SHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSG 351
+HI ++EDP + GSS FD EGV+ + R V++ G + GYFLS+YSA+KLGMKTTGN+G
Sbjct: 297 AHIDLLEDPFVPRGKGSSPFDEEGVRVKARKVIEAGRVHGYFLSSYSARKLGMKTTGNAG 356
Query: 352 GAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKI 411
G+H+L++ S T+ D+L ML+K+ TGL VTELMG G+NY+TGDYS+GA GYW+ENG+I
Sbjct: 357 GSHNLVLSSRLTQPGDDLDAMLRKLGTGLFVTELMGQGVNYVTGDYSRGASGYWVENGRI 416
Query: 412 QYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+ VEEITI+G +++M I A+G+D + T GSIL+ + +AG
Sbjct: 417 VHPVEEITIAGNMKDMLLGIEALGADTYNYGAKTVGSILLNRLKVAG 463
>gi|224824973|ref|ZP_03698079.1| peptidase U62 modulator of DNA gyrase [Pseudogulbenkiania
ferrooxidans 2002]
gi|224602644|gb|EEG08821.1| peptidase U62 modulator of DNA gyrase [Pseudogulbenkiania
ferrooxidans 2002]
Length = 448
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/451 (48%), Positives = 311/451 (68%), Gaps = 8/451 (1%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
+ F Y++S + LA +L A++ GA+ ++ +EG G SV VR G+++ IE N DK ++
Sbjct: 4 TTFSYTRSHLESLAAQVLELARQQGATACEVDISEGTGQSVSVRLGEVETIEYNQDKGVD 63
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
V +Y K G++STSDF +L DT+ AA NIARFTA+D+ AGL + + L + D
Sbjct: 64 VTVYFGQKK----GHASTSDFTATALADTVGAAVNIARFTAADDCAGLAEPSLLATDFPD 119
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
LY PW L + +A +A CE A +S I N+E V+TQQS F+ ANSHGF+ G+P
Sbjct: 120 LALYHPWALPVAEAIELARECEQAARAVDSRISNSEGATVSTQQSQFIYANSHGFVGGFP 179
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
S+H +S + +A +G+ MQRD WYS+ + L+ +G A +RT+ RL A++I+T +
Sbjct: 180 SSRHSLSAAVVASEGESMQRDYWYSAARHREDLESAMQVGARAGERTVRRLNARRITTGQ 239
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
PVLFEAP+A L+ ISG +LYRKS+FL+DSLGK + S + I EDP +L FGS
Sbjct: 240 YPVLFEAPVAASLIGHLVSAISGGALYRKSSFLLDSLGKPVCSPCVVIDEDPFLLRGFGS 299
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
S FD+EGV+T R +V NG+++GY LS+YSA+KLGM+TTGN+GG H+LI+ S + D+
Sbjct: 300 SPFDSEGVETCARRLVDNGVLKGYMLSSYSARKLGMETTGNAGGPHNLIVHS----TGDS 355
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
++L KM TGLLVTEL+G G+N +TGDYS+GA G+W+ENG I ++VEEITI+G L++M
Sbjct: 356 FDDLLSKMGTGLLVTELLGHGVNTLTGDYSRGAAGFWVENGVIAHAVEEITIAGNLRDML 415
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+Q+V IG DVL R + GSILIE+M++AG+
Sbjct: 416 RQVVGIGDDVLVRGAKHVGSILIESMMVAGQ 446
>gi|291614835|ref|YP_003524992.1| peptidase U62 modulator of DNA gyrase [Sideroxydans lithotrophicus
ES-1]
gi|291584947|gb|ADE12605.1| peptidase U62 modulator of DNA gyrase [Sideroxydans lithotrophicus
ES-1]
Length = 448
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/453 (47%), Positives = 313/453 (69%), Gaps = 8/453 (1%)
Query: 7 NRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
N SK ++ QQ+A D+++YA++ GAS + E +EG G +V VR+GK++ IE N DK
Sbjct: 4 NASKVSHTADILQQIASDIVSYARQQGASACATEVSEGFGQAVTVRQGKVETIEYNRDKG 63
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+NV +YI G++ GN+S+SDF ++++ DTI+AA NIAR+TA D+ AGLPD + L
Sbjct: 64 INVSVYI--GQRR--GNASSSDFSRQAVRDTIDAALNIARYTAEDDCAGLPDADQLATEF 119
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D LY PW L+++ A +A CE AF + I N+E V + F+ ANS GF+ G
Sbjct: 120 PDLDLYHPWELNVEQAIQLASECEQAAFRTDRRISNSEGVTVNLNEGRFVQANSLGFIGG 179
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
YP S+H +S S IA KG MQRD WY S + +++ + E IG AA+RT+ RL A+K+ T
Sbjct: 180 YPSSRHSVSCSVIAGKGDSMQRDYWYGSARNAREILKVEEIGRIAAERTVRRLNARKLDT 239
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
+CPVLFEAP+A L F +SG SLYRK++FL+D L + +FS H+ I + P I
Sbjct: 240 MQCPVLFEAPVAGGLFGHFVGAVSGGSLYRKASFLLDQLDEPVFSGHVHIDDVPDIKRGL 299
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
SS FD+EGV+T++R +V+ G+++GYFL +YSA+KLGM+TTGN+GG H+L++
Sbjct: 300 ASSPFDDEGVRTRRRTIVEGGVLRGYFLGSYSARKLGMRTTGNAGGTHNLVVRPGPL--- 356
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+ +L++M GLLVTEL+G G+N +TGDYS+GA G+W+E+G+IQY VEEITI+G L+
Sbjct: 357 -DFNGLLRQMQRGLLVTELLGHGVNQVTGDYSRGAAGFWVEHGEIQYPVEEITIAGNLKE 415
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ IVA+G+DVL + + GS+LIENM +AG+
Sbjct: 416 MYQHIVAVGNDVLVQGARQCGSVLIENMTVAGR 448
>gi|347540412|ref|YP_004847837.1| C69 family peptidase [Pseudogulbenkiania sp. NH8B]
gi|345643590|dbj|BAK77423.1| peptidase U62, modulator of DNA gyrase [Pseudogulbenkiania sp.
NH8B]
Length = 448
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/451 (48%), Positives = 310/451 (68%), Gaps = 8/451 (1%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
+ F Y++S + LA +L A++ GA+ ++ +EG G SV VR G+++ IE N DK ++
Sbjct: 4 TTFSYTRSHLESLAAQVLELARQQGATACEVDISEGTGQSVSVRLGEVETIEYNQDKGVD 63
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
V +Y K G++STSDF +L DT+ AA NIARFTA D+ AGL + + L + D
Sbjct: 64 VTVYFGQKK----GHASTSDFTATALADTVGAAVNIARFTAEDDCAGLAEPSLLATDFPD 119
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
LY PW L + +A +A CE A +S I N+E V+TQQS F+ ANSHGF+ G+P
Sbjct: 120 LALYHPWALPVAEAIELARECEQAARAVDSRISNSEGATVSTQQSQFIYANSHGFVGGFP 179
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
S+H +S + +A +G+ MQRD WYS+ + L+ +G A +RT+ RL A++I+T +
Sbjct: 180 SSRHSLSAAVVASEGESMQRDYWYSAARHREDLESAMQVGARAGERTVRRLNARRITTGQ 239
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
PVLFEAP+A L+ ISG +LYRKS+FL+DSLGK + S + I EDP +L FGS
Sbjct: 240 YPVLFEAPVAASLIGHLVSAISGGALYRKSSFLLDSLGKPVCSPCVVIDEDPFLLRGFGS 299
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
S FD+EGV+T R +V NG+++GY LS+YSA+KLGM+TTGN+GG H+LI+ S + D+
Sbjct: 300 SPFDSEGVETCARRLVDNGVLKGYMLSSYSARKLGMETTGNAGGPHNLIVHS----TGDS 355
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
++L KM TGLLVTEL+G G+N +TGDYS+GA G+W+ENG I ++VEEITI+G L++M
Sbjct: 356 FDDLLSKMGTGLLVTELLGHGVNTLTGDYSRGAAGFWVENGVIAHAVEEITIAGNLRDML 415
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+Q+V IG DVL R + GSILIE+M++AG+
Sbjct: 416 RQVVGIGDDVLVRGAKHVGSILIESMMVAGQ 446
>gi|71906237|ref|YP_283824.1| microcin-processing peptidase 1 [Dechloromonas aromatica RCB]
gi|71845858|gb|AAZ45354.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Dechloromonas aromatica RCB]
Length = 447
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/451 (48%), Positives = 305/451 (67%), Gaps = 8/451 (1%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
+ F Y + QQLA D+L +AK GA+ ++ +EG G SV VR +++ IE N DK +
Sbjct: 5 AAFSYPFATLQQLADDVLKHAKVKGATACEVDVSEGFGQSVTVRCDEVETIEFNRDKGIG 64
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
+ IY G++ Y +STSDF ++L +T+ AA +IARFTA D+ AGL D + + D
Sbjct: 65 ITIY--SGQRKGY--ASTSDFSAQALRETVEAALDIARFTAEDDCAGLADAALMAKDFPD 120
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
LY PW L++++A A RCE AF+ + L+ N+E ++TQQ+HF+ ANS GFM GYP
Sbjct: 121 LDLYHPWALTVEEAIETARRCEQAAFDASPLVSNSEGASISTQQAHFVSANSLGFMGGYP 180
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
S+H IS S I+ + MQRD+WY+++ D +LD +G AA+R ++RL +K+ T +
Sbjct: 181 TSRHYISCSVISGEQDAMQRDDWYTTHRDASRLDDAAQVGRIAAERAVARLGGRKVKTGE 240
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
P++ EAPLA LL SG +LYRKS+FL+D LGKKI +QI E PHI GS
Sbjct: 241 FPIILEAPLAGGLLGSLVHAASGGALYRKSSFLLDQLGKKIMPDFVQIAERPHIKCGLGS 300
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
+SFD++GV T+ R VV NGI+QGYFLSTY+A+KLGM+TT N+GG+H+LII +
Sbjct: 301 ASFDSDGVATRDRDVVSNGILQGYFLSTYTARKLGMQTTANAGGSHNLIIQPGNL----D 356
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
L +L +M GLLVTEL+G GINY+TGDYS+GA GYW+E+GKI Y VEEITI+G L++M
Sbjct: 357 LDGLLAQMGRGLLVTELLGQGINYVTGDYSRGAAGYWVEDGKIAYPVEEITIAGNLKDML 416
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVA+G+DV R S +GSI+I M +AG+
Sbjct: 417 AGIVAVGNDVQIRGSKITGSIMINRMTVAGE 447
>gi|149928349|ref|ZP_01916590.1| putative pmba protein (tlde protein) [Limnobacter sp. MED105]
gi|149822934|gb|EDM82179.1| putative pmba protein (tlde protein) [Limnobacter sp. MED105]
Length = 450
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/452 (50%), Positives = 303/452 (67%), Gaps = 9/452 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F + FQ+L + L AK +GA+ +++ +E G SV VR G+I+ IE DK+ V
Sbjct: 3 FSFKSETFQELTEYALKKAKSLGATDCAVDISEAVGQSVSVRMGEIETIEHTRDKSFGVS 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++ GKK GN+S+SDF +++ I AA +IA++TA+D FAGLPDE + D
Sbjct: 63 VF--KGKKR--GNASSSDFSLEAIDSAIRAALDIAKYTAADKFAGLPDEENISKRHRDLD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS A A E AF+ + I N++ V+T+ HF ANS GF GYP+S
Sbjct: 119 LYHPWNLSTAKAVEKALAMEQAAFDVSKHIRNSDGANVSTESGHFYAANSKGFKGGYPYS 178
Query: 191 KHIISISPIA----IKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
+H +S+SPIA K MQRD WYSS K L +P IG YAA+R ++RL +K I+T
Sbjct: 179 RHSLSVSPIAQAKKSKDSPMQRDFWYSSERKAKDLAKPAKIGAYAAQRALARLGSKPITT 238
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
R CPV+FEAP+A L++ + +SG+SLYRK++FL++SLGK +++ HI I EDP I G+
Sbjct: 239 RNCPVIFEAPIAASLVSHYVGAVSGSSLYRKTSFLLNSLGKPVWAPHITIKEDPFIEGAH 298
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
GSS FD EGVK + R VVK G+ GYFLS+YSA+KLGM+TTGN+GG H+LI+ S KT S
Sbjct: 299 GSSPFDEEGVKVKARTVVKKGVCNGYFLSSYSARKLGMETTGNAGGTHNLILSSTKTVSG 358
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
L +LK M TGLLVTE+MG G+N +TGDYS+GAFGYW+ENG I + VEEITI+G L++
Sbjct: 359 -GLDALLKTMGTGLLVTEMMGQGVNGVTGDYSRGAFGYWVENGIIVHPVEEITIAGNLKD 417
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
M IVA+G D R S GSILIE+M +AG
Sbjct: 418 MLANIVAVGDDACWRGSKHVGSILIESMTVAG 449
>gi|217969979|ref|YP_002355213.1| peptidase U62 modulator of DNA gyrase [Thauera sp. MZ1T]
gi|217507306|gb|ACK54317.1| peptidase U62 modulator of DNA gyrase [Thauera sp. MZ1T]
Length = 448
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/453 (48%), Positives = 312/453 (68%), Gaps = 14/453 (3%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +S++ ++A D+L YA+K GAS + +EG G SV VR+G++D IE N DK + V
Sbjct: 6 FSFSQAHLAEIATDILKYARKHGASSCETDVSEGFGQSVAVRRGEVDTIEYNRDKGVGVT 65
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTL----EMNP 126
+Y+ G++ Y +STSDF KK+L T++AA +IARFTA D AGL D + +M
Sbjct: 66 VYL--GQQRGY--ASTSDFSKKALKATVDAALSIARFTAPDPCAGLADAALMAKAKDMPE 121
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
LD L+ PW + + A +A RCE+ AF + I N+E + QQSHF+ ANSHGF+ G
Sbjct: 122 LD--LFHPWNIDVAQAIELARRCEDAAFAVSPKIGNSEGANTSIQQSHFVSANSHGFLGG 179
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
Y ++H +S S IA +G MQR+ WY S DP +L E +G A +R ++RL AKKI T
Sbjct: 180 YATTRHGLSCSVIAGEGDAMQREYWYDSRRDPAELMVAEEVGRRAGERALARLGAKKIRT 239
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
+ PVLFEA LA L+ F + +SG SLYRKS+FL+DSLGK++FS + I E PH+ +F
Sbjct: 240 CEVPVLFEAQLAVALVGNFVQAVSGGSLYRKSSFLLDSLGKQVFSPVVSIAERPHLKKAF 299
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
GSS FD +GV T+ R VV +G++ GYFLS YSA+KLG++TT N+GG+H+LI+
Sbjct: 300 GSSPFDGDGVATRDREVVTDGVLNGYFLSAYSARKLGLQTTANAGGSHNLIV----KPGE 355
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+L ++++M+ GLLVTEL+G G+NY+TGDYS+GA G+W+E G+I+++VEEITI+G L++
Sbjct: 356 QDLAGLIRQMDRGLLVTELLGHGVNYVTGDYSRGAAGFWVEKGRIKHAVEEITIAGNLRD 415
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
MF+ IVA+G+D L R + GS+LIE M +AG+
Sbjct: 416 MFRGIVAVGNDALPRGAKLCGSVLIERMKVAGR 448
>gi|56475976|ref|YP_157565.1| Zn-dependent protease, modulator of DNA gyrase [Aromatoleum
aromaticum EbN1]
gi|56312019|emb|CAI06664.1| Zn-dependent protease, modulator of DNA gyrase [Aromatoleum
aromaticum EbN1]
Length = 453
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/449 (49%), Positives = 306/449 (68%), Gaps = 8/449 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +S ++A D+L +AKK GA+ + +EG G S VRKG++D IE N DK + V
Sbjct: 13 FSFSPDRLHEIAADVLKFAKKRGATACETDVSEGFGQSATVRKGEVDTIEYNRDKGIGVT 72
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
IY+ + G++STSDF K +L T+ AA +IARFTA D AGL D + + D
Sbjct: 73 IYVGQQR----GHASTSDFSKAALKATVEAAVSIARFTAPDPCAGLADPELMAKDCPDLD 128
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
L+ PW LS++DA A CE AF + I N+E V+TQQSHF+ ANS GF+ GY S
Sbjct: 129 LHHPWQLSVEDAITAARECEEAAFAVSPKITNSEGASVSTQQSHFVSANSAGFIGGYASS 188
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS S IA +G MQR+ WY S D L +++G AA+R ++RL A+KI T + P
Sbjct: 189 RHSISCSVIAGEGDAMQREYWYDSRRDAADLMASDLVGRRAAERALARLGARKIKTCEAP 248
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFEAPLA L+ F +SG SLYRKS+FL+DSLG+ +FS + I E PH+ FGSS
Sbjct: 249 VLFEAPLAVALVGNFVHAVSGGSLYRKSSFLLDSLGQPVFSPIVNISERPHVPKGFGSSP 308
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD++GV T+ R VV +G++QGYFLSTYSA+KLG++TTGN+GG+H+LI+ + +
Sbjct: 309 FDSDGVATRDREVVSDGVLQGYFLSTYSARKLGLQTTGNAGGSHNLIVGAGDM----DFP 364
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
++K M+ GL+VTEL+G G+NY+TGDYS+GA GYW+E GKI+++VEEITI+G L++MF+
Sbjct: 365 ALVKHMDRGLVVTELLGHGVNYVTGDYSRGAAGYWVEKGKIKHAVEEITIAGNLRDMFRS 424
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+D L R + GS+LIE M IAG+
Sbjct: 425 IVAIGNDALPRGAKHCGSVLIERMKIAGR 453
>gi|372487910|ref|YP_005027475.1| putative Zn-dependent protease-like protein [Dechlorosoma suillum
PS]
gi|359354463|gb|AEV25634.1| putative Zn-dependent protease-like protein [Dechlorosoma suillum
PS]
Length = 464
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/452 (48%), Positives = 304/452 (67%), Gaps = 11/452 (2%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNV 69
+F +++ QLA+D + A + GAS + ++ +EG G SV VR+G+++ IE N DK + V
Sbjct: 20 RFSLPQADLLQLARDTVALATRGGASAAEVDVSEGFGQSVSVRQGEVETIEYNRDKGIGV 79
Query: 70 IIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDF 129
+Y+ K G +STSDF +++L T++AA IAR+TA D AGLP++ L D
Sbjct: 80 TVYLGQRK----GYASTSDFSRQALAQTVDAALAIARYTAEDPCAGLPEKALLAKQWQDP 135
Query: 130 KLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPF 189
+LY PW LS++ A +A RCE+ AF + L+ N+E V+ Q+ F ANS GF GYP
Sbjct: 136 QLYYPWQLSVEGAIDLARRCEDAAFAVSPLVKNSEGATVSLQEGQFATANSLGFAGGYPS 195
Query: 190 SKHIISISPIA-IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
S+H I+ S IA KG+ EMQRD+WYS++ DP PE IG YAA+R +SRL +K+ T
Sbjct: 196 SRHYIACSVIAGKKGRNAEMQRDDWYSTHRDPADFPAPESIGDYAARRALSRLGGRKVKT 255
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
+ PV+FEAP+A LL F SG SLYRK++FLVDSLGK+IF+ I I E P +
Sbjct: 256 CEVPVIFEAPIASGLLGNFVYAASGGSLYRKASFLVDSLGKRIFAPGINISERPDLPKGL 315
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
S FDN+GV T+ R VV +G++ GYFLS Y+A+KLGM TTGN+GG H+L++ +
Sbjct: 316 ASGPFDNDGVATRSRQVVSDGVLNGYFLSVYTARKLGMTTTGNAGGCHNLVLEPGR---- 371
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
++L +++++ GLLVTEL+G G+NY+ GDYS+GA GYWIENG+I Y VEEITI+G L+
Sbjct: 372 EDLAGLIRQVKRGLLVTELLGQGVNYVNGDYSRGAAGYWIENGEIAYPVEEITIAGNLKE 431
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
MF I +G+DV+ R S +GSILI+ M +AG
Sbjct: 432 MFMNIAGVGNDVVVRGSKQTGSILIQRMTVAG 463
>gi|339484612|ref|YP_004696398.1| peptidase U62 modulator of DNA gyrase [Nitrosomonas sp. Is79A3]
gi|338806757|gb|AEJ02999.1| peptidase U62 modulator of DNA gyrase [Nitrosomonas sp. Is79A3]
Length = 452
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/458 (48%), Positives = 309/458 (67%), Gaps = 7/458 (1%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIE 60
M L + S+F Y S QQ+A+D+L +AKK GA+ ++G G +V VR+ ++ IE
Sbjct: 1 MNNLPVSDSRFSYPLSTLQQIAKDILAHAKKGGATACETNVSDGFGQTVTVRQNAVETIE 60
Query: 61 QNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDEN 120
N DK ++V +YI G+K G++STSDF +++ DT+ AA +IAR+TA D+ AGL D
Sbjct: 61 YNRDKGLSVTVYI--GQKR--GHASTSDFSPQAISDTVTAALSIARYTADDDCAGLADAE 116
Query: 121 TLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANS 180
L LY PW L+++ A +A CE A+ + I N+E ++ +S F+ ANS
Sbjct: 117 LLAKTYPHLNLYYPWELTVEGAIGLAKECEQAAYAVDKRITNSEGATISVSESQFIYANS 176
Query: 181 HGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLK 240
GFM GYP S+H IS + IA +G QRD WYS D L+ E IG A R+ +RL
Sbjct: 177 LGFMGGYPLSRHNISCAMIAEQGDSKQRDYWYSVARDAADLEAVESIGKKAGMRSAARLG 236
Query: 241 AKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDP 300
A+KI+T + PVLFEA +A L+ FA +SG +LYRKS+FL+DS+G+++F+ IQI+E P
Sbjct: 237 ARKIATCEVPVLFEASIASGLIGHFASAVSGGNLYRKSSFLLDSIGQQVFAPDIQILELP 296
Query: 301 HILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIIS 360
H+ SS+FD++GV T +R +V+NGI+QGYFLS+YSA+KLG++TTGN+GG H+LI+
Sbjct: 297 HLHKGLASSAFDDDGVATVERKIVENGIVQGYFLSSYSARKLGLRTTGNAGGTHNLIM-- 354
Query: 361 NKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITI 420
+ + +LKKM TGLLVTELMG GIN +TGDYS+GA G+W+ENG I Y VEEITI
Sbjct: 355 -QNAAPMRFDALLKKMGTGLLVTELMGHGINAVTGDYSRGASGFWVENGAISYPVEEITI 413
Query: 421 SGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+G L++MF+ I+AIG DV+ R S GS+LI+ M IAG
Sbjct: 414 AGNLKDMFRGILAIGDDVIVRGSKQCGSVLIDRMTIAG 451
>gi|451823317|ref|YP_007459591.1| PmbA protein [Candidatus Kinetoplastibacterium desouzaii TCC079E]
gi|451776117|gb|AGF47158.1| PmbA protein [Candidatus Kinetoplastibacterium desouzaii TCC079E]
Length = 455
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/447 (49%), Positives = 315/447 (70%), Gaps = 5/447 (1%)
Query: 13 YSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIY 72
Y + F L +L AK +GAS + + +E G SV VRK ID IE ++ +++++++
Sbjct: 12 YKQEYFNDLVNKILKSAKTVGASSAFVSISESKGLSVSVRKNDIDTIEHAHNSSLDLVVF 71
Query: 73 IQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLY 132
DG+K G++STSDF +++L T +A++IA+ TA D +GLPD + +D+ +Y
Sbjct: 72 --DGQKS--GSASTSDFSEEALRRTAESAWHIAKHTAVDVASGLPDPHLFPREIIDYGIY 127
Query: 133 TPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKH 192
W S D+ IA E+ A N +S I N + + + +++ L+ N+ GF+ +S +
Sbjct: 128 HEWDKSTDEIVEIAKIAESAALNVDSRITNTDGSFINCGENYSLIGNTLGFIGDCLYSSY 187
Query: 193 IISISPIAIKGKE-MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPV 251
+S+ PIA + MQRD W + + +P KL P ++G AA+R++SRL A++I T K PV
Sbjct: 188 SLSVVPIASESNGIMQRDYWSTHDCNPMKLLDPLLVGRIAAERSVSRLSARRIPTGKYPV 247
Query: 252 LFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSF 311
LFE+P+A L+ A+ I+GN+LYRKS+FLVDSLGK +F S+I +I+DPHI G+ GSSSF
Sbjct: 248 LFESPVALGLVGSLAQAINGNNLYRKSSFLVDSLGKNVFPSYIDVIDDPHIYGAIGSSSF 307
Query: 312 DNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKE 371
D EGVKT+KR +V G+I+GY LSTY+++KLGM+TTGN+GG+H+LI+ S T S DNL
Sbjct: 308 DAEGVKTKKREIVSEGVIRGYLLSTYTSRKLGMQTTGNAGGSHNLIMSSKNTHSEDNLDY 367
Query: 372 MLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQI 431
MLKKM+ GLLVTEL+G GINY+TGDYS+G FGYW+ENG IQY V+EITI+G L +MF +I
Sbjct: 368 MLKKMHRGLLVTELIGQGINYVTGDYSRGVFGYWVENGIIQYPVQEITIAGNLFDMFNKI 427
Query: 432 VAIGSDVLTRNSNTSGSILIENMIIAG 458
VAIGSDV+TR + T+GSILIE+M IAG
Sbjct: 428 VAIGSDVITRGNKTTGSILIEDMYIAG 454
>gi|302879553|ref|YP_003848117.1| peptidase U62 modulator of DNA gyrase [Gallionella
capsiferriformans ES-2]
gi|302582342|gb|ADL56353.1| peptidase U62 modulator of DNA gyrase [Gallionella
capsiferriformans ES-2]
Length = 447
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/449 (47%), Positives = 304/449 (67%), Gaps = 7/449 (1%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNV 69
+F S +++AQDML+YA++ GA+ +S E +EG G +V VR G+++ IE N DK + V
Sbjct: 5 RFANSAESLRRIAQDMLDYARQQGATSASAEVSEGFGQAVTVRHGEVETIEYNRDKGLGV 64
Query: 70 IIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDF 129
+Y + GN+STSDF +++ DT++AA +IAR+TA D+ +GLP+ ++L D
Sbjct: 65 TVYFGQQR----GNASTSDFSAQAVRDTVDAALSIARYTAKDDCSGLPEADSLASEFPDL 120
Query: 130 KLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPF 189
LY PW LS++ A +A CE A + + I N+E V ++ F+ ANS GF+ GYP
Sbjct: 121 DLYHPWDLSVEKAIELAAECEQAALDADPRIQNSEGATVNVHEAQFVFANSLGFIGGYPT 180
Query: 190 SKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKC 249
S+H +S S IA + M+RD WYS L +G AA+RT+ RL A++I+T +
Sbjct: 181 SRHSVSCSVIAEQMDAMERDYWYSVARSADDLLGAVAVGRIAAERTVRRLGARQIATMQV 240
Query: 250 PVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSS 309
PVLFEA +A LL F +SG SLYRKS+FL+D L K +FSSHIQI + P I SS
Sbjct: 241 PVLFEASVAASLLGHFVGAVSGGSLYRKSSFLLDQLDKPVFSSHIQISDVPDIRRGLASS 300
Query: 310 SFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNL 369
FD+EGVKTQ R +V++G+++GYFL +YSA+KLG+++TGNSGG H+LI+ + +L
Sbjct: 301 PFDDEGVKTQHRNIVEDGVLRGYFLGSYSARKLGLRSTGNSGGNHNLIL---QPCGELDL 357
Query: 370 KEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFK 429
+LK M+ GLLVTEL+G G+N ITGDYS+GA G+W+ENG+IQY V E+TI+G L+ M++
Sbjct: 358 AGLLKTMHRGLLVTELLGQGVNGITGDYSRGAAGFWVENGQIQYPVHEVTIAGNLKEMYR 417
Query: 430 QIVAIGSDVLTRNSNTSGSILIENMIIAG 458
IVA+GSDVL + S GSIL+E M +AG
Sbjct: 418 NIVAVGSDVLVQGSRQCGSILLEGMTVAG 446
>gi|325983607|ref|YP_004296009.1| peptidase U62 modulator of DNA gyrase [Nitrosomonas sp. AL212]
gi|325533126|gb|ADZ27847.1| peptidase U62 modulator of DNA gyrase [Nitrosomonas sp. AL212]
Length = 452
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/458 (46%), Positives = 312/458 (68%), Gaps = 7/458 (1%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIE 60
M L + ++F Y S QQ++QD+L YA+K GA+ ++G G +V VR+G ++ IE
Sbjct: 1 MNNLTVSETRFSYPISTLQQISQDILAYARKGGATACETNVSDGFGQTVTVRQGAVETIE 60
Query: 61 QNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDEN 120
N DK ++V +Y+ G+K G++STSDF +++ DT+ AA +IAR+TA D+ AGL +
Sbjct: 61 YNRDKGLSVTVYM--GQKR--GHASTSDFSPQAISDTVAAALSIARYTADDDCAGLAEAE 116
Query: 121 TLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANS 180
L + LY PW +S+++A +A CE + + I N+E ++ +S F+ ANS
Sbjct: 117 LLAKDYPVLDLYFPWQISVEEAIELARTCEQAGYAADKRIANSEGASISVSESQFIYANS 176
Query: 181 HGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLK 240
GF+ GYP S+H IS + IA G QRD WY D L+ E IG A KR+ +RL
Sbjct: 177 LGFLGGYPLSRHSISCAMIAEHGDSKQRDYWYGIARDAMDLEAVESIGKKAGKRSAARLG 236
Query: 241 AKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDP 300
A+KI T + PVLFEAP+A L+ FA +SG +LYR+S+FL++S+G+++F+ HIQI+E P
Sbjct: 237 ARKIDTCEVPVLFEAPIASSLIGHFASAVSGGNLYRQSSFLLNSIGQQVFAPHIQILELP 296
Query: 301 HILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIIS 360
H+ S +FD++GV T +R +V+NG++QGYFLS+YSA+KLG++TTGN+GG+H+LI+
Sbjct: 297 HLHKGLASGAFDDDGVATVERNIVENGVVQGYFLSSYSARKLGLRTTGNAGGSHNLIMRD 356
Query: 361 NKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITI 420
+ S D L L+KM TGLLVTEL+G GIN +TGDYS+GA G+W+E+G I + VEEITI
Sbjct: 357 DAGLSFDAL---LQKMGTGLLVTELLGHGINAVTGDYSRGASGFWVESGVISHPVEEITI 413
Query: 421 SGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+G L+NMF+ I+AIG DV+ R S GS+LI+ M +AG
Sbjct: 414 AGNLKNMFQGILAIGDDVIVRGSKQCGSVLIDRMTVAG 451
>gi|319778572|ref|YP_004129485.1| TldE/PmbA protein [Taylorella equigenitalis MCE9]
gi|397662344|ref|YP_006503044.1| putative protease [Taylorella equigenitalis ATCC 35865]
gi|317108596|gb|ADU91342.1| TldE/PmbA protein [Taylorella equigenitalis MCE9]
gi|394350523|gb|AFN36437.1| putative protease [Taylorella equigenitalis ATCC 35865]
gi|399114806|emb|CCG17602.1| putative protease [Taylorella equigenitalis 14/56]
Length = 442
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/444 (47%), Positives = 310/444 (69%), Gaps = 6/444 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
KSEF+ + L+ AK+ GA+ + E +E +G +V R I+ +E+ +D+ +++ ++
Sbjct: 4 KSEFEYFVKYALDIAKEKGATEAIAEVSESHGLTVSARNKSIETVEEMHDRGLSITVF-- 61
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K +++TS F ++S+ T++ A++IA++TA D FAGLP+ LD LY
Sbjct: 62 --KGKARASAATSLFTEESIKSTVSHAWDIAKYTAEDPFAGLPEPELYATEILDLDLYHD 119
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
W L +DA IA E A +++S I N++ V T + FLL S+GF++G+ + H +
Sbjct: 120 WNLKAEDAADIAIELEKAALDYSSEITNSDGASVQTGTASFLLGTSNGFLAGFDHTSHSL 179
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
+S IA KGK+MQR WYSS+ +P++L P IG YAAKRT+SRL A++I + PVLFE
Sbjct: 180 GLSVIAGKGKKMQRGYWYSSHRNPQRLSSPVDIGEYAAKRTLSRLGARRIKSGDYPVLFE 239
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
AP+A LL F++ ISG SLYR+ +FL +L +K+ S H+ I++DP I G+FGS SFD+E
Sbjct: 240 APIAITLLGSFSQAISGGSLYREMSFLKGALNEKVMSDHLTIVDDPFIKGAFGSGSFDDE 299
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+TQKR +V +GI++GY LSTY+A+KLGM TTGN+GG+H++ + + + + + + ML+
Sbjct: 300 GVRTQKRDLVVDGILKGYLLSTYTARKLGMTTTGNAGGSHNMSL--HSSLETPDFEGMLR 357
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
KM TGLLVTELMG GINY+TG YS+GAFGYW+ENG IQY + EITI+G L++MFK IVA+
Sbjct: 358 KMGTGLLVTELMGQGINYVTGQYSRGAFGYWVENGVIQYPIAEITIAGNLKDMFKSIVAV 417
Query: 435 GSDVLTRNSNTSGSILIENMIIAG 458
GSD+ T+ S T GSILIENM +AG
Sbjct: 418 GSDIYTKGSKTCGSILIENMSVAG 441
>gi|114330703|ref|YP_746925.1| C69 family peptidase [Nitrosomonas eutropha C91]
gi|114307717|gb|ABI58960.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Nitrosomonas eutropha C91]
Length = 454
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/448 (49%), Positives = 305/448 (68%), Gaps = 7/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F Y QQ+A D+L AKK GA + ++G+G +V VR+G+++ IE DK ++V
Sbjct: 13 FTYPYETLQQIANDVLTLAKKGGADACEMHVSDGSGQNVTVRQGEVETIEYTRDKGLSVT 72
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I G K GN+S+SDF +++ +TI+AA +IAR+TA D +AGL D++ L + D
Sbjct: 73 VHI--GHKR--GNASSSDFSPQAIRETISAALSIARYTADDIYAGLADKDLLATSFPDLD 128
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS++ A +A RCE A + I N+E V+ S F+ ANSHGF +GYP S
Sbjct: 129 LYHPWSLSVETAIELARRCEAAALATDKRITNSEGASVSAGASRFVYANSHGFNAGYPLS 188
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS + IA + MQRD WYS L+ E IG A RT++RL A+KI+T + P
Sbjct: 189 RHSISCAVIAGEQNNMQRDYWYSVARAASDLEAIEEIGQKAGMRTLARLGARKIATCEVP 248
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFE+ ++ LL F + ISG+SLYRKS+FL+DS+GK++F + IQI E PH+ S +
Sbjct: 249 VLFESTISSGLLGYFVKAISGSSLYRKSSFLLDSIGKQVFPATIQISELPHLPKGLASCA 308
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGV T R VV+NGI+QGYFL +Y+A+KLGM++TGN+GG H+LI+ ++ + D L
Sbjct: 309 FDDEGVATHPRKVVENGIVQGYFLGSYTARKLGMRSTGNAGGNHNLILENDVSLPFDAL- 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
LKKMN GLLVTEL+G G+N +TGDYS+GA G+W+ENG+I Y VEEITI+G L+ M
Sbjct: 368 --LKKMNKGLLVTELLGHGVNLVTGDYSQGAAGFWVENGEISYPVEEITIAGNLKEMLSG 425
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IVA+G D++ R S GS+LIE MIIAG
Sbjct: 426 IVAVGDDIIVRGSRHCGSLLIERMIIAG 453
>gi|30250130|ref|NP_842200.1| modulator of DNA gyrase [Nitrosomonas europaea ATCC 19718]
gi|30139237|emb|CAD86107.1| Putative modulator of DNA gyrase [Nitrosomonas europaea ATCC 19718]
Length = 455
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/448 (48%), Positives = 305/448 (68%), Gaps = 7/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F YS QQ+A D+L A K GA + +EG+G +V VR+G+++ IE DK +++
Sbjct: 14 FSYSVETLQQIADDVLTLAHKGGADACEMNVSEGSGQNVTVRQGEVETIEYTRDKGLSIT 73
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I G K GN+S+SDF +++ +T++AA +IAR+TA D +AGL D++ L + D
Sbjct: 74 VHI--GHKR--GNASSSDFSPQAIRETVSAALSIARYTADDIYAGLADQDLLATSFPDLD 129
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW L +++A +A +CE A + I N+E V+ SHF+ ANS GF +GYP S
Sbjct: 130 LYHPWSLPVEEAIELARQCEAAALATDKRITNSEGASVSAGASHFVYANSLGFCAGYPLS 189
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS + IA + MQRD WYS L+ E IG A R+++RL A KI+T + P
Sbjct: 190 RHSISCAVIAGEQNNMQRDYWYSVARAAGDLEAIEEIGKKAGMRSLARLGASKIATCEVP 249
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLFE+ +A L+ F + ISG SLYRKS+FL+DS+G+++F + IQI E PH+ S +
Sbjct: 250 VLFESTIASSLIGYFVQAISGGSLYRKSSFLLDSIGRQVFPATIQISELPHLQKGLASCA 309
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGV T R VV+NG++QGYFL +Y+A+KLGM++TGN+GG H+LI+ +N + S D L
Sbjct: 310 FDDEGVATHPRKVVENGVVQGYFLGSYTARKLGMRSTGNAGGNHNLIVENNVSLSFDAL- 368
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
LKKMN GLLVTEL+G G+N +TGDYS+GA G+W+ENG+I + VEEITI+G L+NM
Sbjct: 369 --LKKMNKGLLVTELLGHGVNLVTGDYSQGAAGFWVENGEITHPVEEITIAGNLKNMLSG 426
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IVA+G+DV+ R S GS+LIE M IAG
Sbjct: 427 IVAVGNDVIVRGSRQCGSLLIERMTIAG 454
>gi|429462952|ref|YP_007184415.1| PmbA protein [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|451811733|ref|YP_007448188.1| PmbA protein [Candidatus Kinetoplastibacterium crithidii TCC036E]
gi|429338466|gb|AFZ82889.1| PmbA protein [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|451776891|gb|AGF47890.1| PmbA protein [Candidatus Kinetoplastibacterium crithidii TCC036E]
Length = 454
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/442 (49%), Positives = 309/442 (69%), Gaps = 5/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+++ L A +GAS + +E G SV VRK ID IE +D++++++++ +GK
Sbjct: 16 LREVISRALKDAVDLGASDAVASISESKGLSVSVRKNDIDTIEHTHDRSLSLVVF--NGK 73
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G+S TSDF +S+ T+ AA+ IA+ TA DN +GLP+ N L DF +Y W
Sbjct: 74 RS--GSSFTSDFSIESIKKTVEAAFYIAKHTAIDNASGLPESNLLAQEQKDFDVYHQWDK 131
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ ++ IA E A FN I N + + + ++S+ L++N+ GF + +S + +S+
Sbjct: 132 TTEEIIDIAKISECSAMGFNDKITNTDGSFIDCEESYSLISNTLGFCGDHYYSDYSLSVV 191
Query: 198 PIAI-KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
PIA K MQRD W ++N +P KL P ++G AA+R +SR+ A++I T K PVLFEAP
Sbjct: 192 PIASGKNGSMQRDFWCTNNCNPTKLLDPVVVGRVAAERALSRIDARRIPTGKYPVLFEAP 251
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
+A L+ FA+ SGN+LYRKS+FLVD+LG+KIF I I++DPHI G GSSSFD+EGV
Sbjct: 252 VALGLIGSFAQASSGNNLYRKSSFLVDALGRKIFPDFIDIVDDPHIYGEIGSSSFDSEGV 311
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T+KR VV GI++GYFLSTY+A+KL M TTGN+GG+H+L I S +T D+L M+K+M
Sbjct: 312 ATKKRKVVSGGILEGYFLSTYTARKLDMFTTGNAGGSHNLYINSQRTLEEDSLDTMIKRM 371
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
+ GLLVTEL+G GINY+TGDYS+GAFGYW+ENGKIQ++V+E+TI+G L +MF +IVA+GS
Sbjct: 372 DKGLLVTELIGQGINYVTGDYSRGAFGYWVENGKIQHAVQEVTIAGNLLDMFSKIVAVGS 431
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D +TR + TSGSILIENM IAG
Sbjct: 432 DKITRGNKTSGSILIENMSIAG 453
>gi|74318166|ref|YP_315906.1| microcin-processing peptidase 1 [Thiobacillus denitrificans ATCC
25259]
gi|74057661|gb|AAZ98101.1| Zn-dependent protease, modulator of DNA gyrase [Thiobacillus
denitrificans ATCC 25259]
Length = 446
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/452 (47%), Positives = 301/452 (66%), Gaps = 8/452 (1%)
Query: 7 NRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
+RS+F Y++ + L++ ++ +A GA+ + E +EG G +V VR+G+I+ IE N DK
Sbjct: 2 SRSQFSYTRDQLITLSRMVIEHAVAKGATAADTEISEGVGQNVSVRQGEIETIEYNKDKG 61
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
V +YI G++ G++STSD + +L + A IAR+TA D+ AGLPD + L +
Sbjct: 62 AGVTVYI--GQRR--GHASTSDLSESALKSAVEKALTIARYTAEDDAAGLPDADRLATDV 117
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D LY PW L++++A A CE A + + N+E GV+T SHF+ ANS GF +G
Sbjct: 118 PDLDLYHPWTLTVEEAAETARACEAAALAVDKRLTNSEGAGVSTHASHFIYANSLGFCNG 177
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
Y S+H +S++ I MQRD WYSS +P L+ E +G A RT+ RL +K+ T
Sbjct: 178 YAGSRHGVSVAVIGEDKGAMQRDYWYSSARNPADLESAEAVGRVAGARTVRRLNGRKLDT 237
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
R CPV+FEAP+A L+ F +SG SLYRKS+FL+DSLG ++F+ + I E P +
Sbjct: 238 RSCPVVFEAPIATGLIGNFVAAVSGGSLYRKSSFLLDSLGTEVFAPLVNIREVPFLPAGL 297
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
GS+ FD+EGV +R +V++G++QGYFLS+YSA+KLGM TTGN+GG+H+L++ +
Sbjct: 298 GSAPFDSEGVACIERDIVRDGVVQGYFLSSYSARKLGMTTTGNAGGSHNLVVAPGEL--- 354
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+L +LKKM TGLLVTEL+G G N +TGDYS+GA G+W+ENG+IQY VEEITI+G L+
Sbjct: 355 -DLDGLLKKMGTGLLVTELLGQGANMVTGDYSRGAAGFWVENGEIQYPVEEITIAGNLKQ 413
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
MFK IVAIG DV R S GSILI+ M +AG
Sbjct: 414 MFKGIVAIGRDVERRGSKQVGSILIDRMTVAG 445
>gi|82703530|ref|YP_413096.1| peptidase U62, modulator of DNA gyrase [Nitrosospira multiformis
ATCC 25196]
gi|82411595|gb|ABB75704.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Nitrosospira multiformis ATCC 25196]
Length = 452
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/449 (48%), Positives = 305/449 (67%), Gaps = 7/449 (1%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNV 69
+F YS S QQ+AQD+LN+A+K GAS + ++G G +V VR+G+++ IE N DK ++V
Sbjct: 10 RFSYSFSVLQQIAQDVLNHARKGGASACETDVSDGFGQNVTVRRGQVETIEYNRDKGLSV 69
Query: 70 IIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDF 129
+Y+ G+K G++STSDF +++ DT+ AA +IAR TA+D+ AGL D + L D
Sbjct: 70 TVYV--GQKR--GHASTSDFSPQAISDTVTAALSIARHTAADDCAGLADPDLLAREFPDL 125
Query: 130 KLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPF 189
+LY PW L ++ A +A CE AF + I N+E V+ +S F+ ANS GFM GYP
Sbjct: 126 ELYFPWDLPVEQAIELAQACEAAAFAVDKRITNSEGASVSLGESQFVYANSLGFMGGYPS 185
Query: 190 SKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKC 249
S+H IS + IA MQRD WYS D L+ +G A R++ RL A+KI+T +
Sbjct: 186 SRHSISCAMIASHEDSMQRDYWYSVARDASDLEHAAAVGKKAGTRSVGRLGARKIATCEV 245
Query: 250 PVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSS 309
PVLFEAP+A L+ F +SG SLYRKS+FL+DS+GK+IF+ IQI E PH+ GS
Sbjct: 246 PVLFEAPIASSLIGHFVGAVSGGSLYRKSSFLLDSIGKQIFAPGIQIRERPHLKKGLGSG 305
Query: 310 SFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNL 369
FDNEGV T+ R +V+NG++QGYFL +YSA+KLG+ TTGN+GG H+L++ +
Sbjct: 306 PFDNEGVATRDRNIVENGVVQGYFLGSYSARKLGLVTTGNAGGNHNLVL---DNGAGLTF 362
Query: 370 KEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFK 429
E+L+KM G+LVTEL+G G+N +TGDYS+GA GYW+E+G+I+Y VEEITI+G L++M
Sbjct: 363 AELLRKMGKGVLVTELLGHGVNNVTGDYSRGAAGYWVEDGEIRYPVEEITIAGNLKDMLP 422
Query: 430 QIVAIGSDVLTRNSNTSGSILIENMIIAG 458
I A G+DV+ R S GS+LI+ M+IAG
Sbjct: 423 GISAAGNDVIVRGSKQCGSLLIDRMMIAG 451
>gi|437999560|ref|YP_007183293.1| PmbA protein [Candidatus Kinetoplastibacterium blastocrithidii (ex
Strigomonas culicis)]
gi|429338794|gb|AFZ83216.1| PmbA protein [Candidatus Kinetoplastibacterium blastocrithidii (ex
Strigomonas culicis)]
Length = 391
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/393 (53%), Positives = 292/393 (74%), Gaps = 5/393 (1%)
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+N++++ DGKK G++STSDF +L T+ AA++IAR+TA D +GLP+E+ L
Sbjct: 2 LNIVVF--DGKKS--GSASTSDFSPDALSKTVEAAWHIARYTAIDEASGLPEEDLLAKEF 57
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
DFKLY W S++D IA + E A NF++ IVN + + V + QS+ LL N+ GF
Sbjct: 58 RDFKLYHLWSKSVEDMISIAKQTEEAAINFSNRIVNTDGSFVNSSQSYSLLGNTFGFFGS 117
Query: 187 YPFSKHIISISPIAIKGK-EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
S++ +S+ PIA + MQRD WY SN +P L P IG YAA+R+I+RL A++IS
Sbjct: 118 RISSQYSLSVMPIAGDNQGNMQRDYWYDSNCNPLNLSDPVHIGKYAAERSIARLSARRIS 177
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
T PV+FEAP+A L+ F + SG +LYR ++FL SLGK +FS+HI IIEDPHI G+
Sbjct: 178 TGNFPVIFEAPVALGLIGSFVQAASGGALYRNASFLTGSLGKSVFSNHIDIIEDPHIDGA 237
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
GS+SFD+EGV T KR VV G+I GYFLS+YSA+KLG+ TTGN+GG+H++ +IS+KTK
Sbjct: 238 IGSTSFDSEGVSTIKRSVVSKGVINGYFLSSYSARKLGLSTTGNAGGSHNICMISSKTKK 297
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
+D+L M+K+MN GLL+TEL+G G+NY+TGDYS+GAFG+W+ENG+IQ++V+EITI+G L+
Sbjct: 298 TDDLMSMIKRMNRGLLITELIGQGVNYVTGDYSRGAFGFWVENGEIQHAVQEITIAGNLR 357
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+MF+QI+ IGSDV++R + T+GS+LIENM IAG
Sbjct: 358 DMFRQILLIGSDVISRGTKTTGSVLIENMSIAG 390
>gi|313201858|ref|YP_004040516.1| peptidase u62 modulator of DNA gyrase [Methylovorus sp. MP688]
gi|312441174|gb|ADQ85280.1| peptidase U62 modulator of DNA gyrase [Methylovorus sp. MP688]
Length = 455
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/448 (48%), Positives = 302/448 (67%), Gaps = 5/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ + ++++ +L AK GAS + E + G G +V VR G+ + IE N DK M+V
Sbjct: 12 FSHTLDDLREMSARVLALAKAAGASAAEAEVSFGVGQNVSVRMGETETIEYNRDKGMSVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y K G++STSD ++L DT+ AA NIAR+TA D F GL D + + D
Sbjct: 72 VYFGQQK----GHASTSDLNPQALQDTVAAACNIARYTAKDEFCGLADAALMARDVPDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
L+ PW +S+DDA +A CE+ A + I N+E V+T + F ANSHGF GY S
Sbjct: 128 LHHPWTISVDDAVRLATECEDAARAVDKRITNSEGASVSTYEGLFSYANSHGFSGGYLSS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS S IA + MQRD WYS+ + LD P+ IG A +RT+ RL ++I T + P
Sbjct: 188 RHSISCSVIAEEADAMQRDYWYSTARNADWLDSPKNIGQLAGERTVRRLGCRRIKTAQVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+A LA L++ +SG SLYRKS+FL+DSLGK + SS + I E PHI G+ S+
Sbjct: 248 VLFDASLASGLISHLISAVSGGSLYRKSSFLLDSLGKSVMSSIVNISEQPHIRGALASAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FDNEGV T+ R++V+NG++QGY LS+YSA+KLGM+TTGN+GG H+L ++S + K +++L
Sbjct: 308 FDNEGVATKSRMLVENGVLQGYVLSSYSARKLGMQTTGNAGGNHNL-LVSQQGKPAEDLN 366
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+L++M TGLLVTEL+G GIN +TGDYS+GA G+W+ENG I + VEEITI+G L++MF Q
Sbjct: 367 GLLRQMGTGLLVTELLGHGINMVTGDYSRGAAGFWVENGVIVHPVEEITIAGNLRDMFMQ 426
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IVAIG+DVL + S GSILIE M +AG
Sbjct: 427 IVAIGNDVLVQGSKQVGSILIEQMTVAG 454
>gi|348590675|ref|YP_004875137.1| TldE/PmbA protein [Taylorella asinigenitalis MCE3]
gi|347974579|gb|AEP37114.1| TldE/PmbA protein [Taylorella asinigenitalis MCE3]
Length = 442
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/444 (48%), Positives = 305/444 (68%), Gaps = 6/444 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
KS+F+ + L+ A K GAS + E +E +G +V R I+ +E+ +D+ +++ ++
Sbjct: 4 KSDFEYFVKFALDIATKKGASEAIAEISESHGLTVAARNKSIETVEEMHDRGLSITVF-- 61
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
+GK +++T+ ++S+ T+ A++IA++TA D FAGLP LD LY
Sbjct: 62 NGKAR--ASAATALLTEESIESTVGHAWDIAKYTAEDPFAGLPKPEEYATEILDLDLYHD 119
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
W L + A IA E+ A +F+ I N++ V T S FLL +S+GF+ GY + H +
Sbjct: 120 WSLDAESAGNIAIELESFALDFSDQITNSDGASVQTGCSSFLLGSSNGFLGGYKHTSHSL 179
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
+S IA KGK+MQR WY S+ +P+KL P+ IG YAAKRTISRL A++I + + PVLFE
Sbjct: 180 GLSVIAGKGKKMQRGYWYESHRNPRKLSSPQAIGEYAAKRTISRLGARRIKSGEYPVLFE 239
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
AP+A LL ++ ISG +LYR +FL +L +K+ S HI++++DP I ++GS SFD E
Sbjct: 240 APIAVTLLGALSQAISGGALYRDMSFLKGALNEKVMSDHIKVVDDPFIKQAYGSGSFDQE 299
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV TQKR +V +G+++GY LSTYSA+KLGM TTGN+GG+H++ I S+ T+S D + ML+
Sbjct: 300 GVSTQKRDLVVDGVLKGYLLSTYSARKLGMSTTGNAGGSHNMSIHSS-TESPD-FEGMLR 357
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGLLVTELMG GINY+TG YS+GAFGYW+ENG IQY V EITI+G L+++FK IV+I
Sbjct: 358 EMGTGLLVTELMGHGINYVTGQYSRGAFGYWVENGVIQYPVTEITIAGNLKDIFKSIVSI 417
Query: 435 GSDVLTRNSNTSGSILIENMIIAG 458
GSD T+ S TSGSILIE M +AG
Sbjct: 418 GSDSYTKGSKTSGSILIEKMSVAG 441
>gi|399116991|emb|CCG19803.1| putative protease [Taylorella asinigenitalis 14/45]
Length = 442
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/444 (48%), Positives = 302/444 (68%), Gaps = 6/444 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
KS+F+ + L+ A K GAS + E +E +G +V R I+ +E+ +D+ +++ ++
Sbjct: 4 KSDFEYFVKFALDIATKKGASEAIAEISESHGLTVAARNKSIETVEEMHDRGLSITVF-- 61
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K +++TS ++S+ T+ A++IA++TA D FAGLP LD LY
Sbjct: 62 --KGKARASAATSLLTEESIESTVGHAWDIAKYTAEDPFAGLPKPEEYGTEILDLDLYHD 119
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
W L + A IA E+ A +F+ I N++ V T S FLL +S+GF+ GY + H +
Sbjct: 120 WSLDAESAGNIAIELESFALDFSDQITNSDGASVQTGCSSFLLGSSNGFLGGYKHTSHSL 179
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
+S IA KGK+MQR WY S+ +P+KL P+ IG YAAKRTISRL A++I + + PVLFE
Sbjct: 180 GLSVIAGKGKKMQRGYWYESHRNPRKLSSPQAIGEYAAKRTISRLGARRIKSGEYPVLFE 239
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
AP+A LL ++ ISG +LYR +FL +L +K+ S HI++++DP I ++GS SFD E
Sbjct: 240 APIAVTLLGALSQAISGGALYRDMSFLKGALNEKVMSDHIKVVDDPFIKQAYGSGSFDQE 299
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV TQKR +V +G ++GY LSTYSA+KLGM TTGN+GG+H++ I S+ T+S D + ML+
Sbjct: 300 GVSTQKRDLVVDGELKGYLLSTYSARKLGMSTTGNAGGSHNMSIHSS-TESPD-FEGMLR 357
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGLLVTELMG GINY+TG YS+GAFGYW+ENG IQY V EITI+G L+++FK IV+I
Sbjct: 358 EMGTGLLVTELMGHGINYVTGQYSRGAFGYWVENGVIQYPVTEITIAGNLKDIFKSIVSI 417
Query: 435 GSDVLTRNSNTSGSILIENMIIAG 458
GSD T+ S TSGSILIE M +AG
Sbjct: 418 GSDSYTKGSKTSGSILIEKMSVAG 441
>gi|253997260|ref|YP_003049324.1| peptidase U62 modulator of DNA gyrase [Methylotenera mobilis JLW8]
gi|253983939|gb|ACT48797.1| peptidase U62 modulator of DNA gyrase [Methylotenera mobilis JLW8]
Length = 446
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/449 (47%), Positives = 295/449 (65%), Gaps = 8/449 (1%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S F Y+ E +Q+++D+L AK +GAS + E + G +V VR +++ IE N DK M+
Sbjct: 4 SGFSYTLDEIKQMSEDVLKVAKSLGASQAEAELSLSIGQNVSVRMQEVEHIEYNRDKGMS 63
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
V +Y GK+ G++STSD ++L DT+ AA NIA++TA D+F GL D + D
Sbjct: 64 VTVYF--GKQK--GHASTSDLSAQALKDTVAAACNIAKYTAKDDFCGLADAELMAKAIPD 119
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
L+ PW L++D+A L+A +CE A ++ I+N+E V+T F +NSHGF GYP
Sbjct: 120 LDLHHPWQLTVDEAALLAQQCEEAALAVDARIINSEGASVSTGTGFFAYSNSHGFTGGYP 179
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
S+H IS S IA MQRD WY++ L P IG A +RT+ RL ++KI T +
Sbjct: 180 SSRHGISCSVIAESDDSMQRDYWYATARTAADLQSPAEIGRIAGERTVKRLNSRKIKTCQ 239
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
PVLFEA LA L++ ISG +LYRKS+FL+DSLG++I S + I EDP + S
Sbjct: 240 VPVLFEASLASGLISTLISAISGGNLYRKSSFLLDSLGQQIASPLLNIYEDPFVKKGLAS 299
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
S FDNEGV T R +VK+G++QGY LS+YSA+KLG+KTTGN+GG H+LI+ S +
Sbjct: 300 SPFDNEGVATNARQLVKDGVLQGYVLSSYSARKLGLKTTGNAGGNHNLIVQSGAL----D 355
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
+LK+M TGL+VTEL+G G+N +TGDYS+GA GYW+ENG I + VEEITI+ + +M
Sbjct: 356 FAGLLKEMGTGLVVTELLGHGMNMVTGDYSRGAAGYWVENGVIVHPVEEITIASNMADML 415
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIA 457
K IVA+G+DVL + S GSILIE+M +A
Sbjct: 416 KMIVAVGNDVLVQGSKQVGSILIEHMTVA 444
>gi|91774939|ref|YP_544695.1| microcin-processing peptidase 1 [Methylobacillus flagellatus KT]
gi|91708926|gb|ABE48854.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Methylobacillus flagellatus KT]
Length = 432
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/438 (49%), Positives = 283/438 (64%), Gaps = 10/438 (2%)
Query: 21 LAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMF 80
+++++L AK GAS + E + G G +V VR G+ + IE N DK M+V +Y K
Sbjct: 1 MSEEVLRLAKVAGASSAEAEVSLGIGQNVSVRMGETETIEYNRDKGMSVTVYFGQQK--- 57
Query: 81 YGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSID 140
G++STSD +L DT+ AA NIAR+TA D F GL D L + D L+ PW +S+D
Sbjct: 58 -GHASTSDLSASALRDTVAAACNIARYTAQDEFCGLADPALLARDIPDLDLHHPWDISVD 116
Query: 141 DAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIA 200
+A +A CE A + I N+E V+T + F ANSHGF +GYP S+H +S S IA
Sbjct: 117 EALALALECEQAARFADPRITNSEGASVSTYEGLFSYANSHGFNAGYPSSRHGLSCSVIA 176
Query: 201 IKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFE 260
G MQRD WY+S P LD +G A +R RL KI T + PVLFEAPLA
Sbjct: 177 ESGDSMQRDYWYTSARHPGDLDSARAVGLRAGERAARRLGPGKIKTCQVPVLFEAPLASG 236
Query: 261 LLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQK 320
L++ ISG SLYR+S+FL+DSLGK++ SS + I E PHI SS FDNEGV T+
Sbjct: 237 LISHLVSAISGGSLYRQSSFLLDSLGKQVMSSLMSIEELPHIPRGLASSPFDNEGVATRG 296
Query: 321 RLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD-NLKEMLKKMNTG 379
RL++ NGI++GY L +YSA+KLGM+TTGN+GG H+L++ + D +L +L M TG
Sbjct: 297 RLLINNGILEGYMLGSYSARKLGMQTTGNAGGNHNLVV-----RHGDLDLAGLLNTMGTG 351
Query: 380 LLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVL 439
LLVTEL+G GIN +TGDYS+GA G+W+ENG I Y VEEITI+G L MF IVA+G+DVL
Sbjct: 352 LLVTELLGHGINMVTGDYSRGAAGFWVENGVIAYPVEEITIAGNLAEMFMNIVAVGNDVL 411
Query: 440 TRNSNTSGSILIENMIIA 457
+ S +GSILIE M +A
Sbjct: 412 VQGSKQTGSILIERMTVA 429
>gi|253999887|ref|YP_003051950.1| peptidase U62 modulator of DNA gyrase [Methylovorus glucosetrophus
SIP3-4]
gi|253986566|gb|ACT51423.1| peptidase U62 modulator of DNA gyrase [Methylovorus glucosetrophus
SIP3-4]
Length = 455
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/448 (48%), Positives = 300/448 (66%), Gaps = 5/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ + ++++ +L AK GAS + E + G G +V VR G+ + IE N DK M+V
Sbjct: 12 FSHTLDDLREMSARVLALAKAAGASAAEAEVSFGVGQNVSVRMGETETIEYNRDKGMSVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y K G++STSD ++L DT+ AA NIAR+TA D F GL D + + D
Sbjct: 72 VYFGQQK----GHASTSDLNPQALQDTVAAACNIARYTAKDEFCGLADAVLMARDVPDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
L+ PW +S+DDA +A CE+ A + I N+E V+T + F ANSHGF GY S
Sbjct: 128 LHHPWTISVDDAVRLATECEDAARAVDKRITNSEGASVSTYEGLFSYANSHGFSGGYLSS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS S IA + MQRD WYS+ + LD + IG +RT+ RL ++I T + P
Sbjct: 188 RHSISCSVIAEEADAMQRDYWYSTARNADWLDSSKNIGQLTGERTVRRLGCRRIKTAQVP 247
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+A LA L++ ISG SLYRKS+FL+DSLGK + SS + I E PHI G+ S+
Sbjct: 248 VLFDASLASGLISHLISAISGGSLYRKSSFLLDSLGKPVMSSIVNISEQPHIRGALASAP 307
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FDNEGV T+ R++V+NG++QGY LS+YSA+KLGM+TTGN+GG H+L ++S + K +++L
Sbjct: 308 FDNEGVATKSRMLVENGVLQGYVLSSYSARKLGMQTTGNAGGNHNL-LVSQQGKPAEDLN 366
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+L++M TGLLVTEL+G GIN +TGDYS+GA G+W+ENG I + VEEITI+G L++MF Q
Sbjct: 367 GLLRQMGTGLLVTELLGHGINMVTGDYSRGAAGFWVENGVIVHPVEEITIAGNLRDMFMQ 426
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IVAIG+DVL + S GSILIE M +AG
Sbjct: 427 IVAIGNDVLVQGSKQVGSILIEQMTVAG 454
>gi|297539345|ref|YP_003675114.1| peptidase U62 modulator of DNA gyrase [Methylotenera versatilis
301]
gi|297258692|gb|ADI30537.1| peptidase U62 modulator of DNA gyrase [Methylotenera versatilis
301]
Length = 446
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/449 (46%), Positives = 293/449 (65%), Gaps = 8/449 (1%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S F YS E +Q+++D+L AK +GAS + E + G +V VR +++ IE N DK M+
Sbjct: 4 SGFSYSLDEIKQMSRDVLRVAKDLGASSAEAELSLSIGQNVSVRLNEVENIEYNRDKGMS 63
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
V +Y K G++STSD ++ DT+ AA NIA++TA D F GL D N + LD
Sbjct: 64 VTVYFGQQK----GHASTSDLSPLAIKDTVAAACNIAKYTAKDEFCGLADPNLMAKEALD 119
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
L+ PW +S+++A +IA CE A ++ I N+E V+T +F +NSHGF GYP
Sbjct: 120 LDLHHPWNISVEEAIVIAKECEAAALGVDARITNSEGASVSTSTGYFAYSNSHGFTGGYP 179
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
S+H +S S IA MQRD WYS+ L+ IG A +RT+ RL +KKI T +
Sbjct: 180 SSRHGVSCSVIAESDDNMQRDYWYSTARAAVDLESAAAIGKKAGERTVRRLNSKKIKTCQ 239
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
PV+FEAPLA L++ ISG +LYRKS+FL+DSLGK++ S + I E+PH+ S
Sbjct: 240 VPVMFEAPLASGLISSLINAISGGNLYRKSSFLLDSLGKQVASPLLNIYEEPHLKKGLAS 299
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
S FD+EGV TQ R +V++G++QGY + +YSA+KLGM+TTGN+GG H+LI+ S + +
Sbjct: 300 SPFDSEGVATQSRQLVQDGVLQGYVMGSYSARKLGMQTTGNAGGNHNLIVQSG----AQD 355
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
+LK+M TGLLVTEL+G G+N +TGDYS+GA G+W+E+G I ++VEEITI+ + M
Sbjct: 356 FAGLLKQMGTGLLVTELLGSGMNMVTGDYSRGAAGFWVESGVIVHAVEEITIASNMAEML 415
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIA 457
K IVAIGSD+ + S GSILIE M +A
Sbjct: 416 KMIVAIGSDICIQGSKQVGSILIERMTVA 444
>gi|419797263|ref|ZP_14322756.1| TldD/PmbA family protein [Neisseria sicca VK64]
gi|385698475|gb|EIG28834.1| TldD/PmbA family protein [Neisseria sicca VK64]
Length = 443
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/449 (44%), Positives = 296/449 (65%), Gaps = 8/449 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L L+ AK +GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELTGLCGHALDLAKNMGAAAAEADFSESIGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G +ST+DF +K+L DT+ AA +IAR+TA D+ AGL D + + + D
Sbjct: 63 VYV--GKRK--GRASTADFSEKALQDTVKAAIDIARYTAEDDCAGLADASLMAQHVGDLD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y W LS + A +A +CE A + + I N+E GV T ++ N+HGF + +
Sbjct: 119 RYHEWDLSTEAAIELAKQCEQAALSADERIENSEGAGVQTGHYQYVYGNTHGFTAHQQGT 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS S +A MQRD WY + + +D PE IG AA+RT+ RL ++ I T P
Sbjct: 179 RHSISCSIVAADENGMQRDYWYDAACRHQDMDSPEQIGKTAAERTLRRLNSRNIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ +A L+ +SG +LYR+S+FL+DS+G+K+ + + E+PHI +FGS+
Sbjct: 239 VLFDTTVAGGLIGHLVGALSGGALYRQSSFLIDSIGRKVLPDFLSLREEPHIPRAFGSTY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGV TQ R V+++GI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDSEGVATQPRFVIRDGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G+N ITGDYS+GA G+W+ENG I + V+EITI+G+LQ+M+
Sbjct: 356 -LLKEMGTGLLVTELMGQGVNTITGDYSRGAAGFWVENGIISHPVQEITIAGRLQDMYLG 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IV +D L R+SN GS+LIE+M +AG+
Sbjct: 415 IVGTANDALRRSSNKIGSVLIESMTVAGE 443
>gi|255067987|ref|ZP_05319842.1| protein PmbA [Neisseria sicca ATCC 29256]
gi|255047764|gb|EET43228.1| protein PmbA [Neisseria sicca ATCC 29256]
Length = 453
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/449 (44%), Positives = 296/449 (65%), Gaps = 8/449 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L L+ AK +GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 13 FNHTASELTGLCGHALDLAKNMGAAAAEADFSESIGQSVSVRLGEIEQIEFQQDKSLDIT 72
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G +ST+DF +K+L DT+ AA +IAR+TA D+ AGL D + + + D
Sbjct: 73 VYV--GKRK--GRASTADFSEKALQDTVKAAIDIARYTAEDDCAGLADASLMARHVGDLD 128
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y W LS + A +A +CE A + + I N+E GV T ++ N+HGF + +
Sbjct: 129 RYHEWDLSTEAAIELAKQCEQAALSADERIENSEGAGVQTGHYQYVYGNTHGFTAHQQGT 188
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS S +A MQRD WY + + +D PE IG AA+RT+ RL ++ I T P
Sbjct: 189 RHSISCSIVAADENGMQRDYWYDAACRHQDMDSPEQIGKTAAERTLRRLNSRSIPTGSYP 248
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ +A L+ +SG +LYR+S+FL+DS+G+K+ + + E+PHI +FGS+
Sbjct: 249 VLFDTTVAGGLIGHLVGALSGGALYRQSSFLIDSIGRKVLPDFLSLREEPHIPRAFGSTY 308
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGV TQ R V+++GI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 309 FDSEGVATQPRFVIRDGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 365
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G+N ITGDYS+GA G+W+ENG I + V+EITI+G+LQ+M+
Sbjct: 366 -LLKEMGTGLLVTELMGQGVNTITGDYSRGAAGFWVENGVISHPVQEITIAGRLQDMYLG 424
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IV +D L R+SN GS+LIE+M +AG+
Sbjct: 425 IVGTANDALRRSSNKIGSVLIESMTVAGE 453
>gi|34498652|ref|NP_902867.1| pmbA protein [Chromobacterium violaceum ATCC 12472]
gi|34104505|gb|AAQ60863.1| pmbA protein [Chromobacterium violaceum ATCC 12472]
Length = 435
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/439 (46%), Positives = 293/439 (66%), Gaps = 8/439 (1%)
Query: 21 LAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMF 80
+A +L A + GAS + ++ +EG G +V VR +++ IE N DK ++V +Y+ GKK
Sbjct: 4 IAGRVLELASQQGASSAEVDVSEGVGQTVSVRLSEVETIEYNQDKGVSVTVYL--GKKK- 60
Query: 81 YGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSID 140
G++STSDF ++L DT+ AA +IAR+TA D+ AGL D L + D L+ PW L ++
Sbjct: 61 -GHASTSDFSDEALSDTVRAALDIARYTAEDDCAGLADPQLLADDLPDLDLFHPWQLPVE 119
Query: 141 DAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIA 200
+A +A RCE+ A ++ I N+E V+ Q + F+ ANS+GF G+ S+H +S + +A
Sbjct: 120 EAIELARRCEDAARAVDARIRNSEGASVSVQANQFVYANSNGFSGGFAGSRHSLSAAVVA 179
Query: 201 IKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFE 260
+ MQRD WYS+ L E IG A +R + RL +++ T + PVLFEAP+A
Sbjct: 180 EQDGVMQRDYWYSAARHQDDLASVEEIGRIAGERAVRRLGGRRVKTGQYPVLFEAPVAMS 239
Query: 261 LLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQK 320
LL A ISG +LYRKS+FL+D+LGK + +S + I EDP +L SS+FDNEGV T+
Sbjct: 240 LLGHLAAAISGGNLYRKSSFLLDALGKPVMASRVTIDEDPFLLRGLASSAFDNEGVATKA 299
Query: 321 RLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGL 380
R +V G++QGYFLS+YSA+KLGM+TTGN+GGAH+L++ S + ++ E+L +M +GL
Sbjct: 300 RRLVDGGVLQGYFLSSYSARKLGMQTTGNAGGAHNLVVHS----TGESFAEVLSRMGSGL 355
Query: 381 LVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLT 440
LVTEL+G G+N +TGDYS+GA G+W+ENG I Y VEEITI+G L++MF I AI D L
Sbjct: 356 LVTELLGQGVNTVTGDYSRGAAGFWVENGVIAYPVEEITIAGNLRDMFVNIEAIADDTLD 415
Query: 441 RNSNTSGSILIENMIIAGK 459
R GS+L+ M++AG+
Sbjct: 416 RGGRRIGSVLVGGMMVAGE 434
>gi|344942148|ref|ZP_08781436.1| peptidase U62 modulator of DNA gyrase [Methylobacter tundripaludum
SV96]
gi|344263340|gb|EGW23611.1| peptidase U62 modulator of DNA gyrase [Methylobacter tundripaludum
SV96]
Length = 462
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/459 (43%), Positives = 305/459 (66%), Gaps = 12/459 (2%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIE 60
+E++++N + + + Q +L+ A K GAS + ++ NG SV VR G ++ IE
Sbjct: 16 LEKIVQNHEQI----NRLKNTVQSILDEAAKQGASAAEAGLSQENGLSVSVRLGDVETIE 71
Query: 61 QNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDEN 120
+ D+ + V +Y GK+ G++ST+D S+ +T++AA +IAR+T+ D ++GLP++
Sbjct: 72 HHCDQGLGVTVYF--GKRK--GSASTTDLSPASIKETVSAACSIARYTSEDEYSGLPEKE 127
Query: 121 TLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANS 180
L D L PW + +D A +A CE+ A +++ I N+E V T Q ++ N+
Sbjct: 128 LLATEFPDLDLNHPWDIGVDGAIALAIECEDAARSYHEEITNSEGASVDTHQGIRVMGNT 187
Query: 181 HGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLK 240
GF+ GY ++H +S S +A +G MQRD WY+ + + L+ +G AA+RT+ RL+
Sbjct: 188 LGFLQGYASTRHSLSCSVLAQRGDSMQRDYWYTVARNARDLESAVSVGNKAAERTLRRLQ 247
Query: 241 AKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDP 300
A+ +STR+CPVL+ A A LL+ F ISG +LYRKS+FL+D+L ++F ++I E P
Sbjct: 248 ARSLSTRQCPVLYCAETASGLLSSFIGAISGGNLYRKSSFLLDALDTRVFPEFVRIHEQP 307
Query: 301 HILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIIS 360
++ G+ GS ++D EGV TQ R +V +GI++GY LSTYSA+KLGM++TGN+GG H+L I
Sbjct: 308 YLKGALGSGAYDGEGVATQTRDIVSDGILRGYVLSTYSARKLGMRSTGNAGGVHNLTIDP 367
Query: 361 NKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITI 420
K + + +LK++NTGLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY VEEITI
Sbjct: 368 GKL----DYQGLLKELNTGLLVTELMGQGVNMVTGDYSRGAAGFWVENGEIQYPVEEITI 423
Query: 421 SGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+G L++M K IVA+G+DV R + +GSIL+E M IAG+
Sbjct: 424 AGNLKDMLKNIVAVGNDVDYRGNIRTGSILVERMSIAGE 462
>gi|288576372|ref|ZP_05978677.2| protein PmbA [Neisseria mucosa ATCC 25996]
gi|288565646|gb|EFC87206.1| protein PmbA [Neisseria mucosa ATCC 25996]
Length = 453
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/449 (44%), Positives = 296/449 (65%), Gaps = 8/449 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L L+ AK +GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 13 FNHTASELTGLCGHALDLAKNMGAAAAEADFSESIGQSVSVRLGEIEQIEFQQDKSLDIT 72
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G +ST+DF +K+L DT+ AA +IAR+TA D+ AGL D + + + D
Sbjct: 73 VYV--GKRK--GRASTADFSEKALQDTVKAAIDIARYTAEDDCAGLADASLMAQHVGDLD 128
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y W LS + A +A +CE A + + I N+E GV T ++ N+HGF + +
Sbjct: 129 RYHEWDLSTEAAIELAKQCEQAALSADERIENSEGAGVQTGHYQYVYGNTHGFTAHQQGT 188
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS S +A MQRD WY + + +D PE IG AA+RT+ RL ++ I T P
Sbjct: 189 RHSISCSIVAADENGMQRDYWYDAACRHQDMDSPEQIGKTAAERTLRRLNSRSIPTGNYP 248
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ +A L+ +SG +LYR+S+FL+DS+G+K+ + + E+PHI +FGS+
Sbjct: 249 VLFDTTVAGGLIGHLVGALSGGALYRQSSFLIDSIGRKVLPDFLSLREEPHIPRAFGSTY 308
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGV TQ R V+++GI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 309 FDSEGVATQPRFVIRDGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 365
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G+N ITGDYS+GA G+W+ENG I + V+EITI+G+LQ+M+
Sbjct: 366 -LLKEMGTGLLVTELMGQGVNTITGDYSRGAAGFWVENGIISHPVQEITIAGRLQDMYLG 424
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IV +D L R+SN GS+LIE+M +AG+
Sbjct: 425 IVGTANDALRRSSNKIGSMLIESMTVAGE 453
>gi|225076844|ref|ZP_03720043.1| hypothetical protein NEIFLAOT_01895 [Neisseria flavescens
NRL30031/H210]
gi|224951830|gb|EEG33039.1| hypothetical protein NEIFLAOT_01895 [Neisseria flavescens
NRL30031/H210]
Length = 443
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/448 (44%), Positives = 294/448 (65%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ E +L L++AK+ GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTPDELLRLCGHTLDFAKQSGATSAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ K G +ST+DF +++L DT+ AA +IAR+TA D+ AGL D + + D
Sbjct: 63 VYVGQCK----GRASTADFSERALQDTVKAAIDIARYTAEDDCAGLADAALMATHIGDLD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y W LS + A +A +CE A + + I N+E V T ++ N+HGF + +
Sbjct: 119 RYHEWDLSTESAIDLAEQCEQAALSTDERIENSEGASVHTGHYQYVYGNTHGFAAHQQST 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S+ + +D PE+IG AA+RT+ RL ++ + T P
Sbjct: 179 HHSISCSVVASDEHGMQRDYWYDSSCRHEDMDAPELIGKTAAERTLRRLNSRSVPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
+LF+ +A L+ +SG +LYR+S+FL+DS+GK++ + + E+PHIL SF S+
Sbjct: 239 ILFDTTVAVGLIGHLIGALSGGALYRQSSFLIDSIGKQVLPEFLSLREEPHILRSFRSTY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV TQ R VVK+GI++GYFLS+YSAKKLGM+TTGN+GGAH+L + N T ++
Sbjct: 299 FDAEGVATQPRFVVKDGIVEGYFLSSYSAKKLGMQTTGNAGGAHNLYL--NHTHATQ--A 354
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
++LK+M TGLLVTELMG G+N ITGDYS+GA G+W+ENG I Y V+EITI+G+LQ+M++
Sbjct: 355 DLLKEMGTGLLVTELMGQGVNGITGDYSRGAAGFWVENGVIAYPVQEITIAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I+ + D L R+SN GSIL+ M +AG
Sbjct: 415 IIGVADDALRRSSNQIGSILVSKMTVAG 442
>gi|349608960|ref|ZP_08888372.1| hypothetical protein HMPREF1028_00347 [Neisseria sp. GT4A_CT1]
gi|348613307|gb|EGY62898.1| hypothetical protein HMPREF1028_00347 [Neisseria sp. GT4A_CT1]
Length = 443
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/449 (44%), Positives = 296/449 (65%), Gaps = 8/449 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L L+ AK +GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELTGLCGHALDLAKNMGAAAAEADFSESIGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G +ST+DF +K+L DT+ AA +IAR+TA D+ AGL D + + + D
Sbjct: 63 VYV--GKRK--GRASTADFSEKALQDTVKAAIDIARYTAEDDCAGLADASLMARHVGDLD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y W LS + A +A +CE A + + I N+E GV T ++ N+HGF + +
Sbjct: 119 RYHEWDLSTEAAIELAKQCEQAALSADERIENSEGAGVQTGHYQYVYGNTHGFTAHQQGT 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS S +A MQRD WY + + +D PE IG AA+RT+ RL ++ I T P
Sbjct: 179 RHSISCSIVAADENGMQRDYWYDAACRHQDMDSPEQIGKTAAERTLRRLNSRSIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ +A L+ +SG +LYR+S+FL+DS+G+K+ + + E+PHI +FGS+
Sbjct: 239 VLFDTTVAGGLIGHLVGALSGGALYRQSSFLIDSIGRKVLPDFLSLREEPHIPRAFGSTY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGV T+ R V+++GI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDSEGVATRPRFVIRDGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G+N ITGDYS+GA G+W+ENG I + V+EITI+G+LQ+M+
Sbjct: 356 -LLKEMGTGLLVTELMGQGVNTITGDYSRGAAGFWVENGIISHPVQEITIAGRLQDMYLG 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IV +D L R+SN GS+LIE+M +AG+
Sbjct: 415 IVGTANDALRRSSNKIGSVLIESMTVAGE 443
>gi|340361477|ref|ZP_08683903.1| U62 family microcin-processing peptidase [Neisseria macacae ATCC
33926]
gi|339888576|gb|EGQ78021.1| U62 family microcin-processing peptidase [Neisseria macacae ATCC
33926]
Length = 453
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/449 (44%), Positives = 296/449 (65%), Gaps = 8/449 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L L+ AK +GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 13 FNHTASELTGLCGHALDLAKNMGAAAAEADFSESIGQSVSVRLGEIEQIEFQQDKSLDIT 72
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G +ST+DF +K+L DT+ AA +IAR+TA D+ GL D + + + D
Sbjct: 73 VYV--GKRK--GRASTADFSEKALQDTVKAAIDIARYTAEDDCTGLADASLMARHVGDLD 128
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y W LS + A +A +CE A + + I N+E GV T ++ N+HGF + +
Sbjct: 129 RYHEWDLSTEAAIELAKQCEQAALSADERIENSEGAGVQTGHYQYVYGNTHGFTAHQQGT 188
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS S +A MQRD WY + + +D PE IG AA+RT+ RL ++ I T P
Sbjct: 189 RHSISCSIVAADENGMQRDYWYDAACCHQDMDGPEQIGKTAAERTLRRLNSRSIPTGSYP 248
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ +A L+ +SG +LYR+S+FL+DS+G+K+ + + E+PHI +FGS+
Sbjct: 249 VLFDTTVAGGLIGHLVGALSGGALYRQSSFLIDSIGRKVLPDFLSLREEPHIPRAFGSTY 308
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGV TQ+R V+++GI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 309 FDSEGVATQQRFVIRDGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 365
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G+N ITGDYS+GA G+W+ENG I + V+EITI+G+LQ+M+
Sbjct: 366 -LLKEMGTGLLVTELMGQGVNTITGDYSRGAAGFWVENGVISHPVQEITIAGRLQDMYLG 424
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IV +D L R+SN GS+LIE+M +AG+
Sbjct: 425 IVGTANDALRRSSNKIGSVLIESMTVAGE 453
>gi|261379843|ref|ZP_05984416.1| protein PmbA [Neisseria subflava NJ9703]
gi|284797537|gb|EFC52884.1| protein PmbA [Neisseria subflava NJ9703]
Length = 443
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/448 (44%), Positives = 293/448 (65%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ E +L L+ AK+ GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTPDELLRLCGHTLDLAKQSGATSAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ K G +ST+DF +++L DT+ AA +IAR+TA D+ AGL D + + D
Sbjct: 63 VYVGQRK----GRASTADFSERALQDTVKAAIDIARYTAEDDCAGLADAALMATHIGDLD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y W LS + A +A +CE A + + I N+E V T ++ N+HGF + +
Sbjct: 119 RYHEWDLSTESAIDLAKQCEQAALSTDKRIENSEGASVHTGHYQYVYGNTHGFAAHQQST 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S+ + +D PE+IG AA+RT+ RL ++ + T P
Sbjct: 179 HHSISCSVVASDEHGMQRDYWYDSSCRHEDMDAPELIGKTAAERTLRRLNSRSVPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ +A L+ +SG +LYR+S+FL+DS+GK++ + + E+PHIL SF S+
Sbjct: 239 VLFDTTVAVGLIGHLIGALSGGALYRQSSFLIDSIGKQVLPEFLSLREEPHILRSFRSTY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV TQ R VVK+G+++GYFLS+YSAKKLGM+TTGN+GGAH+L + N T ++
Sbjct: 299 FDAEGVATQPRFVVKDGVVEGYFLSSYSAKKLGMQTTGNAGGAHNLYL--NHTHATQ--A 354
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
++LK+M TGLLVTELMG G+N ITGDYS+GA G+W+ENG I Y V+EITI+G+LQ+M++
Sbjct: 355 DLLKEMGTGLLVTELMGQGVNTITGDYSRGAAGFWVENGVIAYPVQEITIAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I+ + D L R+SN GS+L+ M +AG
Sbjct: 415 IIGVADDALRRSSNQIGSVLVSKMTVAG 442
>gi|421565059|ref|ZP_16010845.1| microcin-processing peptidase 1 [Neisseria meningitidis NM3081]
gi|433536521|ref|ZP_20493029.1| modulator of DNA gyrase family protein [Neisseria meningitidis
77221]
gi|402345388|gb|EJU80505.1| microcin-processing peptidase 1 [Neisseria meningitidis NM3081]
gi|432274471|gb|ELL29559.1| modulator of DNA gyrase family protein [Neisseria meningitidis
77221]
Length = 443
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/448 (45%), Positives = 286/448 (63%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + LN AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLNLAKATGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G +ST+DF +K+L DT+ AA +IAR+TA D+ AGL D + + + D
Sbjct: 63 VYV--GKRK--GRASTADFSEKALQDTVKAAIDIARYTAEDDCAGLADASLMAQHIGDPD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY W L + A +A +CE A N + I N+E V T ++ N+HGF + +
Sbjct: 119 LYHEWDLDTEAAVGLAKQCEQAALNEDERIENSEGAAVQTGHYQYVYGNTHGFAAHRQGT 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S +D PE IG AA+RT+ RL ++ I T P
Sbjct: 179 HHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQTAARRTLRRLGSRSIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ ++ L+ +SG +LYR+S+FL+DS+GKK+ + + E+PHI SF SS
Sbjct: 239 VLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKKVLPDFLNLREEPHIPRSFRSSY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T R V++NGI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVENGVIAYPVHEITVAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI M +AG
Sbjct: 415 IVGVADDALRRSSNKIGSILIAGMTVAG 442
>gi|385339798|ref|YP_005893670.1| protein PmbA [Neisseria meningitidis G2136]
gi|416205478|ref|ZP_11620569.1| protein PmbA [Neisseria meningitidis 961-5945]
gi|433466974|ref|ZP_20424431.1| modulator of DNA gyrase family protein [Neisseria meningitidis
87255]
gi|325142115|gb|EGC64541.1| protein PmbA [Neisseria meningitidis 961-5945]
gi|325198042|gb|ADY93498.1| protein PmbA [Neisseria meningitidis G2136]
gi|432203550|gb|ELK59601.1| modulator of DNA gyrase family protein [Neisseria meningitidis
87255]
Length = 443
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/448 (45%), Positives = 286/448 (63%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKATGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G +ST+DF +++L DT+ AA +IAR+TA D+ AGL D + + + D
Sbjct: 63 VYV--GKRK--GRASTADFSEQALQDTVKAAIDIARYTAEDDCAGLADASLMAQHVGDLD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y W LS + A +A +CE A N + I N+E V T ++ N+HGF + +
Sbjct: 119 RYHEWDLSTEAAVELAKQCEQAALNEDERIENSEGAAVQTGHYQYVYGNTHGFAAHRQGT 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S +D PE IG AA+RT+ RL ++ I T P
Sbjct: 179 HHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQTAARRTLRRLGSRSIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ ++ L+ +SG +LYR+S+FL+DS+GKK+ + + E+PHI SF SS
Sbjct: 239 VLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKKVLPDFLNLREEPHIPRSFRSSY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T R V++NGI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVENGVIAYPVHEITVAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI M +AG
Sbjct: 415 IVGVADDALRRSSNKIGSILIAGMTVAG 442
>gi|241758683|ref|ZP_04756797.1| PmbA protein [Neisseria flavescens SK114]
gi|241321194|gb|EER57390.1| PmbA protein [Neisseria flavescens SK114]
Length = 443
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/448 (44%), Positives = 293/448 (65%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ E +L L+ AK+ GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTPDELLRLCGHTLDLAKQSGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ K G +ST+DF +++L D + AA +IAR+TA D+ AGL D + + D
Sbjct: 63 VYVGQRK----GRASTADFSERALQDMVKAAIDIARYTAEDDCAGLADAALMATHIGDLD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y W LS + A +A +CE A + + I N+E V T ++ N+HGF + +
Sbjct: 119 RYHEWDLSTESAIDLAKQCEQAALSTDERIENSEGASVHTGHYQYVYGNTHGFSAHQQST 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS + +A MQRD WY S+ + +D PE+IG AA+RT+ RL ++ + T P
Sbjct: 179 HHSISCNVVASDEHGMQRDYWYDSSCRHEDMDTPELIGKTAAERTLRRLNSRSVPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ +A L+ +SG +LYR+S+FL+DS+GK++ + + E+PHIL SF S+
Sbjct: 239 VLFDTTVAVGLIGHLIGALSGGALYRQSSFLIDSIGKQVLPEFLSLREEPHILRSFRSTY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV TQ R VVK+GII+GYFLS+YSAKKLGM+TTGN+GGAH+L + N T ++
Sbjct: 299 FDAEGVATQPRFVVKDGIIEGYFLSSYSAKKLGMQTTGNAGGAHNLYL--NHTHATQ--A 354
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
++LK+M TGLLVTELMG G+N ITGDYS+GA G+W+ENG I Y V+EITI+G+LQ+M++
Sbjct: 355 DLLKEMGTGLLVTELMGQGVNGITGDYSRGAAGFWVENGVIAYPVQEITIAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I+ + D L R+SN GSIL+ NM +AG
Sbjct: 415 IIGVADDALRRSSNQIGSILVSNMTVAG 442
>gi|261377439|ref|ZP_05982012.1| protein PmbA [Neisseria cinerea ATCC 14685]
gi|269146160|gb|EEZ72578.1| protein PmbA [Neisseria cinerea ATCC 14685]
Length = 443
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/448 (45%), Positives = 293/448 (65%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKATGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G +ST+DF +K+L DT+ AA +IAR+TA D+ AGL D + + + D
Sbjct: 63 VYV--GKRK--GRASTADFSEKALQDTVKAAIDIARYTAEDDCAGLADASLMAQHIGDLD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y W LS + A +A +CE A N + I N+E V T ++ N+HGF + +
Sbjct: 119 RYHEWDLSTEAAVELAKQCEQAALNEDEHIENSEGAAVQTGHYQYVYGNTHGFAAHQQGT 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS S +A MQRD WY S+ + +D P IG AA+RT+ RL ++ I T P
Sbjct: 179 RHSISCSVVAADENGMQRDYWYDSSCRHQDMDSPGQIGQTAAERTLRRLNSRSIPTGNYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+A ++ L+ +SG SLYR+S+FL+DS+GK++ + + E+PHI + GS+
Sbjct: 239 VLFDATVSGGLIGHLVGALSGGSLYRQSSFLIDSIGKQVLPDFLSLREEPHIPRASGSTY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGV T+ R V+++GII+GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDSEGVATRPRFVIRDGIIEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G+N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTELMGQGVNAITGDYSRGAAGFWVENGIIAYPVHEITVAGRLQDMYRN 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI +M +AG
Sbjct: 415 IVGVSDDALRRSSNQIGSILIGSMTVAG 442
>gi|319637796|ref|ZP_07992562.1| PmbA protein [Neisseria mucosa C102]
gi|317400951|gb|EFV81606.1| PmbA protein [Neisseria mucosa C102]
Length = 443
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/448 (44%), Positives = 293/448 (65%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ E +L L+ AK+ GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTPDELLRLCGHTLDLAKQSGATSAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ K G +ST+DF +++L DT+ AA +IAR+TA D+ AGL D + + D
Sbjct: 63 VYVGQRK----GRASTADFSERALQDTVKAAIDIARYTAEDDCAGLADAALMATHIGDLD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y W LS + A +A +CE A + + I N+E V T ++ N+HGF + +
Sbjct: 119 RYHEWDLSTESAIDLAKQCEQAALSTDKRIENSEGASVHTGHYQYVYGNTHGFAAHQQST 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S+ + +D PE+IG AA+RT+ RL ++ + T P
Sbjct: 179 HHSISCSVVASDEHGMQRDYWYDSSCRHEDMDAPELIGKTAAERTLRRLNSRSVPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ +A L+ +SG +LYR+S+FL+DS+GK++ + + E+PHIL SF S+
Sbjct: 239 VLFDTTVAVGLIGHLIGALSGGALYRQSSFLIDSIGKQVLPEFLSLREEPHILRSFRSTY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV TQ R VVK+G+++GYFL++YSAKKLGM+TTGN+GGAH+L + N T ++
Sbjct: 299 FDAEGVATQPRFVVKDGVVKGYFLNSYSAKKLGMQTTGNAGGAHNLYL--NHTHATQ--A 354
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
++LK+M TGLLVTELMG G+N ITGDYS+GA G+W+ENG I Y V+EITI+G+LQ+M++
Sbjct: 355 DLLKEMGTGLLVTELMGQGVNTITGDYSRGAAGFWVENGVIAYPVQEITIAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I+ + D L R+SN GS+L+ M +AG
Sbjct: 415 IIGVADDALRRSSNQIGSVLVSKMTVAG 442
>gi|421863078|ref|ZP_16294779.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379407|emb|CBX21974.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 443
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/449 (45%), Positives = 290/449 (64%), Gaps = 10/449 (2%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKATGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G +ST+DF +K+L DT+ AA +IAR+TA D+ AGL D + + + D
Sbjct: 63 VYV--GKRK--GRASTADFSEKALQDTVKAAIDIARYTAEDDCAGLADASLMAQHVGDLD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y W LS + A +A +CE A N + I N+E V T ++ N+HGF + +
Sbjct: 119 RYHEWDLSTEAAVELAKQCEQAALNEDERIENSEGAAVQTGHYQYVYGNTHGFAAHRQST 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S +D PE IG A +RT+ RL ++ I T P
Sbjct: 179 HHSISCSVVAADESGMQRDYWYDSACRYPDMDSPETIGQTAGRRTLRRLGSRSIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ ++ L+ +SG +LYR+S+FL+DS+GK++ + + E+PHI SF SS
Sbjct: 239 VLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKQVLPDFLNLREEPHIPRSFRSSY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLII-ISNKTKSSDNL 369
FD EGV T R V++NGI++GYFLS+YSA+KLGM+TTGN+GGAH+L + ++KT+S
Sbjct: 299 FDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHKTQS---- 354
Query: 370 KEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFK 429
++LK+M TGLLVTELMG G N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 355 -DLLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVENGVIAYPVHEITVAGRLQDMYR 413
Query: 430 QIVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI M +AG
Sbjct: 414 DIVGVADDALRRSSNKIGSILIAGMTVAG 442
>gi|417957339|ref|ZP_12600263.1| protein PmbA [Neisseria weaveri ATCC 51223]
gi|343968562|gb|EGV36789.1| protein PmbA [Neisseria weaveri ATCC 51223]
Length = 442
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/448 (44%), Positives = 290/448 (64%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +SK+E QL L+ AK+ GA+ + +F+E G SV VR +I+ IE DK++++
Sbjct: 2 FNHSKNELIQLCAQALDLAKQNGATSAEADFSESIGQSVSVRLSEIEQIEYQQDKSLDIT 61
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ K G +ST+DF ++L DT+ AA +IA++TA+D+ AGL D + +
Sbjct: 62 VYVGQRK----GRASTADFSPQALQDTVKAAVDIAKYTATDDCAGLADAAMMATQFGELD 117
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y W L ++A +A +CE A ++ I N+E +G+ T + NSHGFM+ +
Sbjct: 118 KYHEWQLPTEEAVELAKKCEAAALQYDERIHNSEGSGLQTGHYQHVYGNSHGFMAHQQGT 177
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS S +A MQRD WY P LD+PE IG AA+RT+ RL ++ I+T P
Sbjct: 178 RHSISCSVVAENSDGMQRDYWYDMACSPNDLDKPESIGRIAAERTVKRLGSRSIATGNHP 237
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F+ +A L+ +SG +LYR+S+FL+DSLGK + S I + E+PHI +FGS+
Sbjct: 238 VVFDTSIAGSLIGHLIGGLSGGALYRQSSFLLDSLGKTVLPSFIHLREEPHIPRAFGSTY 297
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T+ R V++NG++QGYFL +YSA+KLGM++TGN+GGAH+L + SD
Sbjct: 298 FDAEGVATKPRYVIENGVVQGYFLGSYSARKLGMQSTGNAGGAHNLHLNHTHATQSD--- 354
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK M +GLL+TELMG G+N +TGDYS+GA G+W+ENG I Y V+EITI+G+LQ M++
Sbjct: 355 -LLKTMGSGLLITELMGQGVNMLTGDYSRGAAGFWVENGIIAYPVQEITIAGRLQEMYQN 413
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I+ + D L R+SN GSILI +M +AG
Sbjct: 414 IIGVADDALKRSSNKIGSILISDMTVAG 441
>gi|345874198|ref|ZP_08826012.1| protein PmbA [Neisseria weaveri LMG 5135]
gi|343970471|gb|EGV38644.1| protein PmbA [Neisseria weaveri LMG 5135]
Length = 442
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/448 (44%), Positives = 289/448 (64%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +SK+E QL L+ AK+ GA+ + +F+E G SV VR +I+ IE DK++++
Sbjct: 2 FNHSKNELIQLCAQALDLAKQNGATSAEADFSESIGQSVSVRLSEIEQIEYQQDKSLDIT 61
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ K G +ST+DF ++L DT+ AA +IA++TA+D+ AGL D + +
Sbjct: 62 VYVGQRK----GRASTADFSPQALQDTVKAAVDIAKYTATDDCAGLADAAMMATQFGELD 117
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y W L ++A +A +CE A ++ I N+E G+ T + NSHGFM+ +
Sbjct: 118 KYHEWQLPTEEAVELAKKCEAAALQYDERIHNSEGAGLQTGHYQHVYGNSHGFMAHQQGT 177
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS S +A MQRD WY P LD+PE IG AA+RT+ RL ++ I+T P
Sbjct: 178 RHSISCSVVAENSDGMQRDYWYDMACSPNDLDKPESIGRIAAERTVKRLGSRSIATGNHP 237
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F+ +A L+ +SG +LYR+S+FL+DSLGK + S I + E+PHI +FGS+
Sbjct: 238 VVFDTSIAGSLIGHLIGGLSGGALYRQSSFLLDSLGKTVLPSFIHLREEPHIPRAFGSTY 297
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T+ R V++NG++QGYFL +YSA+KLGM++TGN+GGAH+L + SD
Sbjct: 298 FDAEGVATKPRYVIENGVVQGYFLGSYSARKLGMQSTGNAGGAHNLHLNHTHATQSD--- 354
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK M +GLL+TELMG G+N +TGDYS+GA G+W+ENG I Y V+EITI+G+LQ M++
Sbjct: 355 -LLKTMGSGLLITELMGQGVNMLTGDYSRGAAGFWVENGIIAYPVQEITIAGRLQEMYQN 413
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I+ + D L R+SN GSILI +M +AG
Sbjct: 414 IIGVADDALKRSSNKIGSILISDMTVAG 441
>gi|381151380|ref|ZP_09863249.1| putative Zn-dependent protease-like protein [Methylomicrobium album
BG8]
gi|380883352|gb|EIC29229.1| putative Zn-dependent protease-like protein [Methylomicrobium album
BG8]
Length = 443
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/443 (45%), Positives = 290/443 (65%), Gaps = 8/443 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E + + Q +L+ A + GAS + ++ NG SV R G ++ IE + D+ + V +Y D
Sbjct: 9 ELKAIVQSLLDEALRQGASAAEAGLSQENGLSVTARMGDVETIEHHRDQGLGVTVYF-DR 67
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
+K G++ST+ +++ DT+ AA +IAR+T +D+ AGLPD L D +L PW
Sbjct: 68 RK---GSASTTHLSPEAIKDTVAAACSIARYTNADDCAGLPDRELLATEFPDLQLNHPWP 124
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
+ + A +A CE+ A ++ I N+E V T Q +L N+ GF+ G ++H +S
Sbjct: 125 IDAEAAIALAIECEDVARGYDPEISNSEGASVNTHQGVHVLGNTLGFLHGTMSTRHSLSC 184
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
S +A +G MQRD WYS +P L+ +G AA+RT+ RL A+ +STR+CPVL+ A
Sbjct: 185 SVLAERGGNMQRDYWYSVARNPSDLESAIHVGQKAAQRTLRRLGARGLSTRQCPVLYAAE 244
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
+A LL F ISG LYRKS+FL+DSLGK+IF I I E PH++G+ GS+++D+EGV
Sbjct: 245 VAAGLLGSFIGAISGGVLYRKSSFLLDSLGKQIFPEFIHIHEQPHLVGALGSAAYDSEGV 304
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T+ +V G+++ Y L TYSA+KLGMK+TGN+GG H+L I + + MLK +
Sbjct: 305 ATRPHDIVSQGVVRSYVLGTYSARKLGMKSTGNAGGVHNLTI----DPGTQDFHGMLKLL 360
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
+TGLLVTELMG G+N +TGDYS+GA G+W+ENGKIQY VEEITI+G L+NMF+ IVA+G+
Sbjct: 361 DTGLLVTELMGQGVNMVTGDYSRGAAGFWVENGKIQYPVEEITIAGNLKNMFRNIVAVGN 420
Query: 437 DVLTRNSNTSGSILIENMIIAGK 459
DV R + +GSILIE M +AG+
Sbjct: 421 DVDLRGNVRTGSILIERMSVAGE 443
>gi|357406798|ref|YP_004918722.1| protein pmbA (protein tldE) [Methylomicrobium alcaliphilum 20Z]
gi|351719463|emb|CCE25139.1| Protein pmbA (Protein tldE) [Methylomicrobium alcaliphilum 20Z]
Length = 443
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/455 (43%), Positives = 296/455 (65%), Gaps = 12/455 (2%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
++NR + S + L Q +L+ AK GA+ + + +G SV R G ++ IE + D
Sbjct: 1 MQNREEI----SRLENLVQSILDEAKLQGATAAEAGLSVDSGLSVTARLGDVETIEHHRD 56
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + V +Y K G++ST+D S+ +T+ AA + AR+ + D +AGLP+++ L
Sbjct: 57 QGLGVTVYFGQRK----GSASTTDLSNASIKETVTAACSFARYGSEDPYAGLPEQDWLAT 112
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
D L+ PW L+ D A +A CE+ A ++++ I N+E VT+ Q +L NS GF+
Sbjct: 113 EFPDLDLFHPWSLAADRAIELAIACEDAARSYSTEITNSEGATVTSHQGIRVLGNSLGFL 172
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
G S+H IS + + +G MQRD WYS +P L+ + IG AA+RTI RL+ + +
Sbjct: 173 KGAESSRHSISCAVLGQRGDSMQRDYWYSVARNPDLLEAVDSIGRKAAERTIRRLQGRSL 232
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
STR+CPVL+ A +A L ISG +LYRKS+FL+++L +IF + I E P+++G
Sbjct: 233 STRQCPVLYSAEVASSLFGSLIGAISGGNLYRKSSFLLNALDTRIFPEFVHIHEQPYMVG 292
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
+ GS++FD EGVKT+ R +V GI++ Y LSTYSAKKLG+ +TGN+GG H+L++ S
Sbjct: 293 ALGSAAFDAEGVKTRARDIVAEGILKDYVLSTYSAKKLGLASTGNAGGVHNLVVDSG--- 349
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+D+ MLKK+ TGLLVTELMG G+ +TGDYS+GA G+W+ENG+IQY VEEITI+G L
Sbjct: 350 -TDDFTGMLKKLGTGLLVTELMGQGVKMVTGDYSRGAAGFWVENGEIQYPVEEITIAGNL 408
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++MFK +VA+G+DV R + +GS+LIE M IAG+
Sbjct: 409 KDMFKNLVAVGNDVDYRGNVRTGSVLIERMSIAGE 443
>gi|254804710|ref|YP_003082931.1| PmbA protein [Neisseria meningitidis alpha14]
gi|254668252|emb|CBA05098.1| PmbA protein [Neisseria meningitidis alpha14]
Length = 443
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/448 (45%), Positives = 286/448 (63%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKATGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G +ST+DF +K+L DT+ AA +IAR+TA D+ AGL D + + + D
Sbjct: 63 VYV--GKRK--GRASTADFSEKALQDTVKAAIDIARYTAEDDCAGLADASLMAQHIGDPD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY W L + A +A +CE A N + I N+E V T ++ N+HGF + +
Sbjct: 119 LYHEWDLDTEAAVGLAKQCEQAALNEDERIENSEGAAVQTGHYQYVYGNTHGFAAHRQGT 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S +D PE IG AA+RT+ RL ++ I T P
Sbjct: 179 HHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQTAARRTLRRLGSRSIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ ++ L+ +SG +LYR+S+FL+DS+GKK+ + + E+PHI SF SS
Sbjct: 239 VLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKKVLPDFLNLREEPHIPRSFRSSY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T R V++NGI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDAEGVATAPRFVIQNGIVKGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVT+LMG G N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTKLMGQGANTITGDYSRGAAGFWVENGIIAYPVHEITVAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI M +AG
Sbjct: 415 IVGVADDALRRSSNKIGSILIAGMTVAG 442
>gi|421537859|ref|ZP_15984041.1| microcin-processing peptidase 1 [Neisseria meningitidis 93003]
gi|402317896|gb|EJU53423.1| microcin-processing peptidase 1 [Neisseria meningitidis 93003]
Length = 443
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/448 (45%), Positives = 282/448 (62%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKATGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G + T+DF +++L DT+ AA +IAR TA D AGL D + + D
Sbjct: 63 VYV--GKRK--GRAGTADFSEQALRDTVRAAADIARHTAEDGCAGLADPELMAQHVGDLD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y W LS + A +A +CE A N + I N+E V T ++ N+HGF + +
Sbjct: 119 RYHEWDLSTEAAVGLAKQCEQAALNEDERIENSEGAAVQTGHYQYVYGNTHGFAAHRQGT 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S +D PE IG AA+RT+ RL ++ I T P
Sbjct: 179 HHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQTAARRTLRRLGSRSIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ ++ L+ +SG +LYR+S+FL+DS+GKK+ + + E+PHI SF SS
Sbjct: 239 VLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKKVLPDFLNLREEPHIPRSFRSSY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T R V++NGI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVENGVIAYPVHEITVAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI M +AG
Sbjct: 415 IVGVADDALRRSSNKIGSILIAGMTVAG 442
>gi|15676735|ref|NP_273880.1| pmbA protein [Neisseria meningitidis MC58]
gi|385851504|ref|YP_005898019.1| protein PmbA [Neisseria meningitidis M04-240196]
gi|385853477|ref|YP_005899991.1| protein PmbA [Neisseria meningitidis H44/76]
gi|385854969|ref|YP_005901482.1| protein PmbA [Neisseria meningitidis M01-240355]
gi|416162749|ref|ZP_11606816.1| protein PmbA [Neisseria meningitidis N1568]
gi|416197341|ref|ZP_11618551.1| protein PmbA [Neisseria meningitidis CU385]
gi|427827884|ref|ZP_18994905.1| modulator of DNA gyrase family protein [Neisseria meningitidis
H44/76]
gi|433464820|ref|ZP_20422305.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM422]
gi|433473238|ref|ZP_20430602.1| modulator of DNA gyrase family protein [Neisseria meningitidis
97021]
gi|433481788|ref|ZP_20439053.1| modulator of DNA gyrase family protein [Neisseria meningitidis
2006087]
gi|433483773|ref|ZP_20441001.1| modulator of DNA gyrase family protein [Neisseria meningitidis
2002038]
gi|433485973|ref|ZP_20443174.1| modulator of DNA gyrase family protein [Neisseria meningitidis
97014]
gi|433488069|ref|ZP_20445237.1| modulator of DNA gyrase family protein [Neisseria meningitidis
M13255]
gi|433490189|ref|ZP_20447318.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM418]
gi|433504557|ref|ZP_20461497.1| modulator of DNA gyrase family protein [Neisseria meningitidis
9506]
gi|433506857|ref|ZP_20463769.1| modulator of DNA gyrase family protein [Neisseria meningitidis
9757]
gi|433508918|ref|ZP_20465791.1| modulator of DNA gyrase family protein [Neisseria meningitidis
12888]
gi|433511102|ref|ZP_20467934.1| modulator of DNA gyrase family protein [Neisseria meningitidis
4119]
gi|7226074|gb|AAF41250.1| pmbA protein [Neisseria meningitidis MC58]
gi|316984244|gb|EFV63220.1| modulator of DNA gyrase family protein [Neisseria meningitidis
H44/76]
gi|325127942|gb|EGC50844.1| protein PmbA [Neisseria meningitidis N1568]
gi|325140013|gb|EGC62542.1| protein PmbA [Neisseria meningitidis CU385]
gi|325200481|gb|ADY95936.1| protein PmbA [Neisseria meningitidis H44/76]
gi|325203910|gb|ADY99363.1| protein PmbA [Neisseria meningitidis M01-240355]
gi|325206327|gb|ADZ01780.1| protein PmbA [Neisseria meningitidis M04-240196]
gi|389606074|emb|CCA44987.1| protein pmbA [Neisseria meningitidis alpha522]
gi|432204307|gb|ELK60352.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM422]
gi|432210839|gb|ELK66795.1| modulator of DNA gyrase family protein [Neisseria meningitidis
97021]
gi|432217619|gb|ELK73487.1| modulator of DNA gyrase family protein [Neisseria meningitidis
2006087]
gi|432221476|gb|ELK77286.1| modulator of DNA gyrase family protein [Neisseria meningitidis
2002038]
gi|432223019|gb|ELK78801.1| modulator of DNA gyrase family protein [Neisseria meningitidis
97014]
gi|432224535|gb|ELK80300.1| modulator of DNA gyrase family protein [Neisseria meningitidis
M13255]
gi|432228097|gb|ELK83798.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM418]
gi|432242072|gb|ELK97596.1| modulator of DNA gyrase family protein [Neisseria meningitidis
9506]
gi|432242646|gb|ELK98164.1| modulator of DNA gyrase family protein [Neisseria meningitidis
9757]
gi|432247732|gb|ELL03167.1| modulator of DNA gyrase family protein [Neisseria meningitidis
12888]
gi|432248593|gb|ELL04018.1| modulator of DNA gyrase family protein [Neisseria meningitidis
4119]
Length = 443
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/448 (45%), Positives = 283/448 (63%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKATGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G +ST+DF +K+L DT+ AA +IAR TA D AGL D + + D
Sbjct: 63 VYV--GKRK--GRASTADFSEKALQDTVKAAIDIARHTAEDGCAGLADACLMAKHIGDPD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY W L + A +A +CE A N + I N+E V T ++ N+HGF + +
Sbjct: 119 LYHEWDLDTEAAVGLAKQCEQAALNEDERIENSEGAAVQTGHYQYVYGNTHGFAAHRQGT 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S +D PE IG AA+RT+ RL ++ I T P
Sbjct: 179 HHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQTAARRTLRRLGSRSIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ ++ L+ +SG +LYR+S+FL+DS+GKK+ + + E+PHI SF SS
Sbjct: 239 VLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKKVLPDFLNLREEPHIPRSFRSSY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T R V++NGI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVENGVIAYPVHEITVAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI M +AG
Sbjct: 415 IVGVADDALRRSSNKIGSILIAGMTVAG 442
>gi|385324422|ref|YP_005878861.1| putative PmbA-like protein [Neisseria meningitidis 8013]
gi|421540015|ref|ZP_15986168.1| microcin-processing peptidase 1 [Neisseria meningitidis 93004]
gi|421544204|ref|ZP_15990282.1| microcin-processing peptidase 1 [Neisseria meningitidis NM140]
gi|421546314|ref|ZP_15992363.1| microcin-processing peptidase 1 [Neisseria meningitidis NM183]
gi|421552608|ref|ZP_15998582.1| microcin-processing peptidase 1 [Neisseria meningitidis NM576]
gi|261392809|emb|CAX50390.1| putative PmbA-like protein [Neisseria meningitidis 8013]
gi|402320299|gb|EJU55790.1| microcin-processing peptidase 1 [Neisseria meningitidis 93004]
gi|402324049|gb|EJU59487.1| microcin-processing peptidase 1 [Neisseria meningitidis NM183]
gi|402324316|gb|EJU59752.1| microcin-processing peptidase 1 [Neisseria meningitidis NM140]
gi|402331240|gb|EJU66581.1| microcin-processing peptidase 1 [Neisseria meningitidis NM576]
Length = 443
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/448 (45%), Positives = 282/448 (62%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKATGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G + T+DF +++L DT+ AA +IAR TA D AGL D + + D
Sbjct: 63 VYV--GKRK--GRAGTADFSEQALRDTVRAAADIARHTAEDGCAGLADPELMAQHIGDPD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY W L + A +A +CE A N + I N+E V T ++ N+HGF + +
Sbjct: 119 LYHEWDLDTEAAVGLAKQCEQAALNEDERIENSEGAAVQTGHYQYVYGNTHGFAAHRQGT 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S +D PE IG AA+RT+ RL ++ I T P
Sbjct: 179 HHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQTAARRTLRRLGSRSIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ ++ L+ +SG +LYR+S+FL+DS+GKK+ + + E+PHI SF SS
Sbjct: 239 VLFDTTISGGLIGHLVGALSGGALYRQSSFLIDSIGKKVLPDFLNLREEPHIPRSFRSSY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T R V++NGI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVENGVIAYPVHEITVAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI M +AG
Sbjct: 415 IVGVADDALRRSSNKIGSILIAGMTVAG 442
>gi|296315336|ref|ZP_06865277.1| protein PmbA [Neisseria polysaccharea ATCC 43768]
gi|296837713|gb|EFH21651.1| protein PmbA [Neisseria polysaccharea ATCC 43768]
Length = 443
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/448 (44%), Positives = 293/448 (65%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKATGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G +ST+DF +K+L DT+ AA +IAR+TA D+ AGL D + + + D
Sbjct: 63 VYV--GKRK--GRASTADFSEKALQDTVKAAIDIARYTAEDDCAGLADASLMAQHVGDLD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y W LS + A +A +CE A N + I N+E V T ++ N+HGF + +
Sbjct: 119 RYHEWDLSPEAAVELAKQCEQAALNEDERIENSEGAAVQTGHYQYVYGNTHGFAAHQQGT 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS S +A MQRD WY S+ + +D P IG AA+RT+ RL ++ I T P
Sbjct: 179 RHSISCSVVAADENGMQRDYWYDSSCRHQDMDSPAQIGQTAAERTLRRLNSRSIPTGNYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+A ++ L+ +SG +LYR+S+FL++S+GK+I + + E+PHI +FGS+
Sbjct: 239 VLFDATVSGGLIGHLVGALSGGALYRQSSFLINSIGKQILPDFLSLREEPHIPRAFGSTY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGV T+ R ++++GI++ YFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDSEGVATRPRFIIRDGIVESYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK++ TGLLVTELMG G+N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEVGTGLLVTELMGQGVNAITGDYSRGAAGFWVENGIIAYPVHEITVAGRLQDMYRN 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI +M +AG
Sbjct: 415 IVGVSDDALRRSSNQIGSILIGSMTVAG 442
>gi|421554590|ref|ZP_16000531.1| microcin-processing peptidase 1 [Neisseria meningitidis 98008]
gi|402332550|gb|EJU67875.1| microcin-processing peptidase 1 [Neisseria meningitidis 98008]
Length = 443
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/448 (45%), Positives = 282/448 (62%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKATGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G + T+DF +++L DT+ AA +IAR TA D AGL D + + D
Sbjct: 63 VYV--GKRK--GRAGTADFSEQALRDTVRAAADIARHTAEDGCAGLADACLMAKHIGDPD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY W L + A +A +CE A N + I N+E V T ++ N+HGF + +
Sbjct: 119 LYHEWDLDTEAAVGLAKQCEQAALNEDERIENSEGAAVQTGHYQYVYGNTHGFAAHRQGT 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S +D PE IG AA+RT+ RL ++ I T P
Sbjct: 179 HHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQTAARRTLRRLGSRSIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ ++ L+ +SG +LYR+S+FL+DS+GKK+ + + E+PHI SF SS
Sbjct: 239 VLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKKVLPDFLNLREEPHIPRSFRSSY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T R V++NGI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVENGVIAYPVHEITVAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI M +AG
Sbjct: 415 IVGVADDALRRSSNKIGSILIAGMTVAG 442
>gi|304387852|ref|ZP_07370026.1| U62 family microcin-processing peptidase [Neisseria meningitidis
ATCC 13091]
gi|304338117|gb|EFM04253.1| U62 family microcin-processing peptidase [Neisseria meningitidis
ATCC 13091]
Length = 443
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/448 (45%), Positives = 282/448 (62%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKATGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G + T+DF +++L DT+ AA +IAR TA D AGL D + + D
Sbjct: 63 VYV--GKRK--GRAGTADFSEQALRDTVRAAADIARHTAEDGCAGLADACLMAKHIGDPD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY W L + A +A +CE A N + I N+E V T ++ N+HGF + +
Sbjct: 119 LYHEWDLDTEAAVGLAKQCEQAALNEDERIENSEGAAVQTGHYQYVYGNTHGFAAHRQGT 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S +D PE IG AA+RT+ RL ++ I T P
Sbjct: 179 HHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQTAARRTLRRLGSRSIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ ++ L+ +SG +LYR+S+FL+DS+GKK+ + + E+PHI SF SS
Sbjct: 239 VLFDTTISGGLIGHLVGALSGGALYRQSSFLIDSIGKKVLPDFLNLREEPHIPRSFRSSY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T R V++NGI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVENGVIAYPVHEITVAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI M +AG
Sbjct: 415 IVGVADDALRRSSNKIGSILIAGMTVAG 442
>gi|416183668|ref|ZP_11612681.1| protein PmbA [Neisseria meningitidis M13399]
gi|416213878|ref|ZP_11622571.1| protein PmbA [Neisseria meningitidis M01-240013]
gi|325134025|gb|EGC56680.1| protein PmbA [Neisseria meningitidis M13399]
gi|325144131|gb|EGC66438.1| protein PmbA [Neisseria meningitidis M01-240013]
Length = 443
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/448 (45%), Positives = 281/448 (62%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKATGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G + T+DF +++L DT+ AA +IAR TA D AGL D + + D
Sbjct: 63 VYV--GKRK--GRAGTADFSEQALRDTVRAAADIARHTAEDGCAGLADPELMAQHIGDPD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY W L + A A +CE A N + I N+E V T ++ N+HGF + +
Sbjct: 119 LYHEWDLDTEAAVGFAKQCEQAALNEDERIENSEGAAVQTGHYQYVYGNTHGFAAHRQGT 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S +D PE IG AA+RT+ RL ++ I T P
Sbjct: 179 HHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQTAARRTLRRLGSRSIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ ++ L+ +SG +LYR+S+FL+DS+GKK+ + + E+PHI SF SS
Sbjct: 239 VLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKKVLPDFLNLREEPHIPRSFRSSY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T R V++NGI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVENGVIAYPVHEITVAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI M +AG
Sbjct: 415 IVGVADDALRRSSNKIGSILIAGMTVAG 442
>gi|421548583|ref|ZP_15994608.1| microcin-processing peptidase 1 [Neisseria meningitidis NM2781]
gi|421557053|ref|ZP_16002962.1| microcin-processing peptidase 1 [Neisseria meningitidis 80179]
gi|421558879|ref|ZP_16004757.1| microcin-processing peptidase 1 [Neisseria meningitidis 92045]
gi|254672380|emb|CBA05641.1| PmbA protein [Neisseria meningitidis alpha275]
gi|402326244|gb|EJU61649.1| microcin-processing peptidase 1 [Neisseria meningitidis NM2781]
gi|402335738|gb|EJU71002.1| microcin-processing peptidase 1 [Neisseria meningitidis 80179]
gi|402337622|gb|EJU72870.1| microcin-processing peptidase 1 [Neisseria meningitidis 92045]
Length = 443
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/448 (45%), Positives = 282/448 (62%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKATGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G + T+DF +++L DT+ AA +IAR TA D AGL D + + D
Sbjct: 63 VYV--GKRK--GRAGTADFSEQALRDTVRAAADIARHTAEDGCAGLADACLMAKHIGDPD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY W L + A +A +CE A N + I N+E V T ++ N+HGF + +
Sbjct: 119 LYHEWDLDTEAAVELAKQCEQAALNEDERIENSEGAAVQTGHYQYVYGNTHGFAAHRQGT 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S +D PE IG AA+RT+ RL ++ I T P
Sbjct: 179 HHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQTAARRTLRRLGSRSIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ ++ L+ +SG +LYR+S+FL+DS+GKK+ + + E+PHI SF SS
Sbjct: 239 VLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKKVLPDFLNLREEPHIPRSFRSSY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T R V++NGI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDAEGVATAPRFVIQNGIVKGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVENGVIAYPVHEITVAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI M +AG
Sbjct: 415 IVGVADDALRRSSNKIGSILIAGMTVAG 442
>gi|333982462|ref|YP_004511672.1| peptidase U62 [Methylomonas methanica MC09]
gi|333806503|gb|AEF99172.1| peptidase U62 modulator of DNA gyrase [Methylomonas methanica MC09]
Length = 443
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/442 (45%), Positives = 282/442 (63%), Gaps = 8/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+ + Q +L+ AK+ GA+ + F+ NG SV R G ++ IE + D+ + V +Y G+
Sbjct: 10 LKDVVQQLLDEAKQQGATGAEAAFSVDNGLSVSARLGDVETIEYHCDQGIGVTVYF--GR 67
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
K G++ST+D SL +T+ AA +IAR+ + D +AGLPD L D L PW +
Sbjct: 68 KK--GSASTNDVSTASLKETVKAACSIARYASEDEYAGLPDPELLATEFPDLDLNHPWDI 125
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ A +A CEN A +F+ I N+E V + Q + NS GF+ GY S+ IS S
Sbjct: 126 DAEKAIALAIECENAARHFDKAISNSEGASVNSHQGTRVFGNSLGFLQGYQSSRQSISCS 185
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
+A G MQRD WYS +P L+ + +G AA+RT++RL A+ +S R+CPVLF +
Sbjct: 186 VLAGSGDSMQRDYWYSVARNPALLESAQFVGEKAARRTVARLNARSLSPRQCPVLFAPEM 245
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ ISG+SLYRKS+FL+DSL +I ++I E P ++G GS+S+D EGV
Sbjct: 246 ASGLIGSLLGAISGSSLYRKSSFLLDSLDTQILPDFVRIHEQPLLVGGMGSASYDAEGVA 305
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
TQ R +V NGI++ Y LSTYSA+KLGM+TTGN+GG H+L + S + MLK +
Sbjct: 306 TQARDIVSNGILRSYVLSTYSARKLGMQTTGNAGGVHNLTVDSGDK----DFAGMLKLLG 361
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGLLVTELMG G+N +TGDYS+GA G+W+ENG IQY V+EITI+G L++M + IVAIG+D
Sbjct: 362 TGLLVTELMGQGVNRVTGDYSRGASGFWVENGVIQYPVQEITIAGNLKSMLRNIVAIGND 421
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
V R + GSIL+E M IAG+
Sbjct: 422 VDLRGNIRVGSILLEQMAIAGE 443
>gi|298369239|ref|ZP_06980557.1| PmbA protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298283242|gb|EFI24729.1| PmbA protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 443
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/448 (45%), Positives = 287/448 (64%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ E L L AKK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTPDELTDLCSRTLALAKKYGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y G++ G +ST+DF K+L DT+ AA +IAR+TA D+ AGL D + + P+D
Sbjct: 63 VYA--GRRK--GRASTADFSDKALVDTVRAAIDIARYTAEDDCAGLADADLMADKPIDLD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y W LS ++A +A +CE A + + I N+E V T ++ NSHGFM+ +
Sbjct: 119 RYHEWDLSAEEAAALAKQCEQAALDSDERIENSEGADVQTGHYQYVYGNSHGFMAHQQGT 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS S +A + M+RD WY S + L+ PE IG AA RT+ RL ++ I T P
Sbjct: 179 RHGISCSVVAADEQGMERDYWYDSACCHQDLETPEQIGRTAALRTVRRLDSRSIPTGTYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ ++ L+ A +SG +LYR+S+FL+DS+GKKI + + E+PHI +FGS
Sbjct: 239 VLFDTTMSGSLIGHLAGALSGGALYRQSSFLMDSIGKKILPDFVNLREEPHIPRAFGSCW 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGV T R V+KNGI++GYFLS+YSA+KLGM+TTGN+GG H+L + +D
Sbjct: 299 FDSEGVATHPRFVIKNGIVEGYFLSSYSARKLGMQTTGNAGGPHNLYLAPTHAAQAD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G+N ITGDYS+GA G+W+ENG I +SV EITI+G+LQ+M+
Sbjct: 356 -LLKEMGTGLLVTELMGQGVNTITGDYSRGAAGFWVENGVIAHSVHEITIAGRLQDMYLN 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I I D L R+ N GSILI M +AG
Sbjct: 415 IAGIADDALRRSPNKIGSILIAEMTVAG 442
>gi|349575524|ref|ZP_08887437.1| U62 family microcin-processing peptidase [Neisseria shayeganii 871]
gi|348012917|gb|EGY51850.1| U62 family microcin-processing peptidase [Neisseria shayeganii 871]
Length = 480
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/454 (43%), Positives = 283/454 (62%), Gaps = 9/454 (1%)
Query: 6 KNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDK 65
+ S F +SKSE L + +L+ A+ GA+ + + +E G SV VR +I+ IE DK
Sbjct: 34 RRESMFNHSKSELSVLCEQVLSLARAGGATAAEADISESVGQSVQVRLQEIEQIEYQQDK 93
Query: 66 NMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMN 125
++++ +Y+ K G +ST DF +L DT+ AA +IAR+TA D+ AGL D +
Sbjct: 94 SLDITVYVGQRK----GRASTGDFSPAALADTVRAAIDIARYTAEDDCAGLADAELMATE 149
Query: 126 PLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMS 185
D Y W L D+A +A RCE A + ++ I N+E GV T F+ NSHGF+
Sbjct: 150 TGDLASYFEWPLETDEAIELARRCEAAAQSADARISNSEGAGVQTGHYQFVYGNSHGFLQ 209
Query: 186 GYPFSKHIISISPIAIKGK-EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
S+H +S S +A MQRD W+ DP LD PE +G AA+RT+ RL A+ +
Sbjct: 210 HRQGSRHSLSCSMVAAGSDGRMQRDYWFDLARDPADLDSPEAVGRLAAERTVRRLNARSL 269
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
T PVLF+ +A L+ +SG +LYR+++FL DS+G+ I + + E+PH+
Sbjct: 270 PTGSYPVLFDTTVAGSLIGHLVGALSGGALYRQTSFLPDSIGRAILPPTLSLREEPHLPK 329
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
+ GS+ FD EGV T+ R V++NG+IQGYFLS+YSA+KLGM TT N+GGAH+L++ N T
Sbjct: 330 ALGSTYFDAEGVGTRPRFVIENGVIQGYFLSSYSARKLGMTTTANAGGAHNLML--NHTH 387
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ + +L++M +GLLVTELMG G+N ITGDYS+GA G+W+ENG I Y VEEITI+ +L
Sbjct: 388 A--DQAALLREMGSGLLVTELMGQGVNPITGDYSRGAAGFWVENGVIAYPVEEITIASRL 445
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
Q+M I + D L R++N GSILI M +AG
Sbjct: 446 QDMLPSIAGVADDALRRSANKVGSILIAEMTVAG 479
>gi|385328161|ref|YP_005882464.1| PmbA protein [Neisseria meningitidis alpha710]
gi|385856986|ref|YP_005903498.1| protein PmbA [Neisseria meningitidis NZ-05/33]
gi|416172317|ref|ZP_11608734.1| protein PmbA [Neisseria meningitidis OX99.30304]
gi|416188163|ref|ZP_11614632.1| protein PmbA [Neisseria meningitidis M0579]
gi|308389013|gb|ADO31333.1| PmbA [Neisseria meningitidis alpha710]
gi|325129991|gb|EGC52786.1| protein PmbA [Neisseria meningitidis OX99.30304]
gi|325135946|gb|EGC58556.1| protein PmbA [Neisseria meningitidis M0579]
gi|325207875|gb|ADZ03327.1| protein PmbA [Neisseria meningitidis NZ-05/33]
Length = 443
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/448 (45%), Positives = 292/448 (65%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKAAGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G +ST+DF +K+L DT+ AA +IAR+TA D+ AGL D + + + D
Sbjct: 63 VYV--GKRK--GRASTADFSEKALQDTVKAAIDIARYTAEDDCAGLADASLMAQHIGDPD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY W L + A +A +CE A N + I N+E V T ++ N+HGF + +
Sbjct: 119 LYHEWDLDTEAAVELAKQCEQAALNEDERIENSEGAAVQTGHYQYVYGNTHGFAAHQQGT 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS S +A MQRD WY S+ + +D P IG AA+RT+ RL ++ I T P
Sbjct: 179 RHSISCSVVAADENGMQRDYWYDSSCRHQDMDSPTQIGQTAAERTLRRLNSRSIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+A ++ L+ +SG SLYR+S+FL+DS+GK++ + + E+PHI +FGS+
Sbjct: 239 VLFDATVSGGLIGHLVGALSGGSLYRQSSFLIDSIGKQVLPDFLSLREEPHIPRAFGSTY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGV T+ R V+++GI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDSEGVATRPRFVIRDGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVENGVIAYPVHEITVAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI M +AG
Sbjct: 415 IVGVADDALRRSSNKIGSILIAGMTVAG 442
>gi|218767949|ref|YP_002342461.1| hypothetical protein NMA1048 [Neisseria meningitidis Z2491]
gi|385337784|ref|YP_005891657.1| putative PmbA-like protein [Neisseria meningitidis WUE 2594]
gi|433475442|ref|ZP_20432783.1| modulator of DNA gyrase family protein [Neisseria meningitidis
88050]
gi|433479406|ref|ZP_20436700.1| modulator of DNA gyrase family protein [Neisseria meningitidis
63041]
gi|433513192|ref|ZP_20469986.1| modulator of DNA gyrase family protein [Neisseria meningitidis
63049]
gi|433515264|ref|ZP_20472036.1| modulator of DNA gyrase family protein [Neisseria meningitidis
2004090]
gi|433517338|ref|ZP_20474087.1| modulator of DNA gyrase family protein [Neisseria meningitidis
96023]
gi|433519559|ref|ZP_20476280.1| modulator of DNA gyrase family protein [Neisseria meningitidis
65014]
gi|433523919|ref|ZP_20480584.1| modulator of DNA gyrase family protein [Neisseria meningitidis
97020]
gi|433527948|ref|ZP_20484559.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM3652]
gi|433530122|ref|ZP_20486715.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM3642]
gi|433532379|ref|ZP_20488945.1| modulator of DNA gyrase family protein [Neisseria meningitidis
2007056]
gi|433534088|ref|ZP_20490633.1| modulator of DNA gyrase family protein [Neisseria meningitidis
2001212]
gi|433540692|ref|ZP_20497147.1| modulator of DNA gyrase family protein [Neisseria meningitidis
63006]
gi|121051957|emb|CAM08265.1| hypothetical protein NMA1048 [Neisseria meningitidis Z2491]
gi|319410198|emb|CBY90536.1| putative PmbA-like protein [Neisseria meningitidis WUE 2594]
gi|432211260|gb|ELK67215.1| modulator of DNA gyrase family protein [Neisseria meningitidis
88050]
gi|432217209|gb|ELK73078.1| modulator of DNA gyrase family protein [Neisseria meningitidis
63041]
gi|432248869|gb|ELL04293.1| modulator of DNA gyrase family protein [Neisseria meningitidis
63049]
gi|432253852|gb|ELL09188.1| modulator of DNA gyrase family protein [Neisseria meningitidis
2004090]
gi|432254347|gb|ELL09682.1| modulator of DNA gyrase family protein [Neisseria meningitidis
96023]
gi|432255550|gb|ELL10879.1| modulator of DNA gyrase family protein [Neisseria meningitidis
65014]
gi|432260818|gb|ELL16076.1| modulator of DNA gyrase family protein [Neisseria meningitidis
97020]
gi|432266255|gb|ELL21443.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM3652]
gi|432268050|gb|ELL23222.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM3642]
gi|432268324|gb|ELL23495.1| modulator of DNA gyrase family protein [Neisseria meningitidis
2007056]
gi|432272598|gb|ELL27705.1| modulator of DNA gyrase family protein [Neisseria meningitidis
2001212]
gi|432277707|gb|ELL32753.1| modulator of DNA gyrase family protein [Neisseria meningitidis
63006]
Length = 443
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/448 (44%), Positives = 282/448 (62%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKATGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G + T+DF +++L DT+ AA +IAR TA D AGL D + + D
Sbjct: 63 VYV--GKRK--GRAGTADFSEQALRDTVRAAADIARHTAEDGCAGLADPELMAQHIGDPD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY W L + A +A +CE A N + I N+E V T ++ N++GF + +
Sbjct: 119 LYHEWDLDTEAAVGLAKQCEQAALNEDERIENSEGAAVQTGHYQYVYGNTYGFAAHRQST 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S +D PE IG AA+RT+ RL ++ I T P
Sbjct: 179 HHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQTAARRTLRRLGSRSIPTGNYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ ++ L+ +SG +LYR+S+FL+DS+GKK+ + + E+PHI SF SS
Sbjct: 239 VLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKKVLPDFLNLREEPHIPRSFRSSY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T R V++NGI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVENGVIAYPVHEITVAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI M +AG
Sbjct: 415 IVGVADDALRRSSNKIGSILIAGMTVAG 442
>gi|53802437|ref|YP_112914.1| pmbA protein [Methylococcus capsulatus str. Bath]
gi|53756198|gb|AAU90489.1| pmbA protein [Methylococcus capsulatus str. Bath]
Length = 444
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/441 (41%), Positives = 282/441 (63%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+ L + L A + GAS + + + G S+ VR G ++ IE + + + + +Y K
Sbjct: 11 LESLTRLCLEEAARQGASAAEVACSADQGLSLTVRLGAVETIEHHRSQGVGITVYYGQRK 70
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST+D +++L DT+ AA IAR+ A D AGLP+ L + D LY PW L
Sbjct: 71 ----GSASTTDLSERALTDTVGAACRIARYGAEDPCAGLPEAELLAKDIPDLDLYHPWTL 126
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ +A CEN A + I N+E + + +L NS GF+ GY S+H +S S
Sbjct: 127 DAEQGIELALACENAARGHSDAITNSEGASLNAFEGVRVLGNSLGFLHGYASSRHSLSCS 186
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
I + MQRD+W++ DP +L+ E +G AA+RT+ RL A+ +STR+CPVLF A +
Sbjct: 187 VIGERDGNMQRDDWWTVARDPAELESAEAVGRKAAERTVRRLGARGLSTRQCPVLFAADV 246
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ I G +LYRKS+FL+D++G++IF + I E PH+ GS+ +D EGV
Sbjct: 247 ASSLIGHLIAAIRGGNLYRKSSFLLDAVGQRIFPEFVHIHERPHLRRGLGSAPYDAEGVA 306
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T+ R +V++G+++ Y LSTYSA+KLG++TTGN+GG H+LI+ + ++ ++++M
Sbjct: 307 TRDRDLVRDGVLESYVLSTYSARKLGLQTTGNAGGVHNLIVAPGQ----EDCDTLIRRMG 362
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGL+VTEL+G G+N +TGDYS+GA GYW+ENG+I++ VEEITI+G L++MF +VAIG+D
Sbjct: 363 TGLIVTELLGQGVNIVTGDYSRGAAGYWVENGEIRFPVEEITIAGNLRDMFGHVVAIGND 422
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R + +GSILIE+M +AG
Sbjct: 423 VDLRGNIRTGSILIESMTVAG 443
>gi|329118569|ref|ZP_08247273.1| U62 family microcin-processing peptidase [Neisseria bacilliformis
ATCC BAA-1200]
gi|327465304|gb|EGF11585.1| U62 family microcin-processing peptidase [Neisseria bacilliformis
ATCC BAA-1200]
Length = 450
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/449 (44%), Positives = 286/449 (63%), Gaps = 8/449 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +S E L L+ AK+ GA+ + + +E G V VR +I+ IE DK++++
Sbjct: 10 FTHSPQELSDLCALALDIAKQKGATAAEADLSESVGQDVQVRLQEIEHIEHQQDKSLDIT 69
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ K G +ST+DF ++++ +T+ AA +IAR TA D+ AGL D + D
Sbjct: 70 VYLGQSK----GRASTADFSRRAIEETVCAALDIARHTAQDDCAGLADAELMAREFGDLD 125
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y PW LS ++A +A RCE A ++ + N+E V T F NSHGF+ +
Sbjct: 126 KYHPWELSAEEAAALARRCEAAALGADARVKNSEGADVQTSHYQFAYGNSHGFLQHERGT 185
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H +S S +A G MQRD WY ++LD E IG AA RT+ RL A + TR CP
Sbjct: 186 RHSVSCSVVAEAGGTMQRDYWYDLARSREELDSMENIGRTAALRTVRRLGAASLPTRNCP 245
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+A ++ L+ +SG +LYR+S+FL DSLG KI ++ + E+PHI ++GS+
Sbjct: 246 VLFDATVSGSLIGHLVGALSGGALYRQSSFLTDSLGTKILPQNLSLREEPHIPRAWGSTW 305
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGV T R V++NG+IQGYFLS+YSA+KLG+ TTGN+GGAH+LI+ N T +
Sbjct: 306 FDSEGVATCPRFVIENGVIQGYFLSSYSARKLGLATTGNAGGAHNLIL--NATCPTQ--A 361
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+L++M +GLLVTELMG G+N +TGDYS+GA G+W+ENG IQY VEEIT++G+LQ+MF
Sbjct: 362 GLLRQMGSGLLVTELMGQGVNMLTGDYSRGAAGFWVENGVIQYPVEEITVAGRLQDMFAD 421
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
I + D L R+S+ GSILI +M +AG+
Sbjct: 422 IAGVADDALRRSSHKVGSILIGSMTVAGQ 450
>gi|385342167|ref|YP_005896038.1| protein PmbA [Neisseria meningitidis M01-240149]
gi|325202373|gb|ADY97827.1| protein PmbA [Neisseria meningitidis M01-240149]
Length = 443
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/448 (45%), Positives = 289/448 (64%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKAAGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G +ST+DF +K+L DT+ AA +IAR+TA D+ AGL D + + + D
Sbjct: 63 VYV--GKRK--GRASTADFSEKALQDTVKAAIDIARYTAEDDCAGLADASLMAQHIGDPD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY W L + A +A +CE A N + I N+E V T ++ N+HGF + +
Sbjct: 119 LYHEWDLDTEAAVELAKQCEQAALNEDERIENSEGAAVQTGHYQYVYGNTHGFAAHQQGT 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS S +A MQRD WY S+ + +D P IG AA+RT+ RL ++ I T P
Sbjct: 179 RHSISCSVVAADENGMQRDYWYDSSCRHQDMDSPTQIGQTAAERTLRRLNSRSIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+A ++ L+ +SG SLYR+S+FL+DS+GK++ + + E+PHI SF SS
Sbjct: 239 VLFDATVSGGLIGHLVGALSGGSLYRQSSFLIDSIGKQVLPDFLNLREEPHIPRSFRSSY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T R V++NGI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVENGVIAYPVHEITVAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI M +AG
Sbjct: 415 IVGVADDALRRSSNKIGSILIAGMTVAG 442
>gi|421563055|ref|ZP_16008877.1| microcin-processing peptidase 1 [Neisseria meningitidis NM2795]
gi|421906622|ref|ZP_16336515.1| Protein pmbA [Neisseria meningitidis alpha704]
gi|393292370|emb|CCI72456.1| Protein pmbA [Neisseria meningitidis alpha704]
gi|402341762|gb|EJU76935.1| microcin-processing peptidase 1 [Neisseria meningitidis NM2795]
Length = 443
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/448 (44%), Positives = 281/448 (62%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKATGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G + T+DF +++L DT+ AA +IAR TA D AGL + + D
Sbjct: 63 VYV--GKRK--GRAGTADFSEQALRDTVRAAADIARHTAEDGCAGLAHPELMAQHIGDPD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY W L + A +A +CE A N + I N+E V T ++ N++GF + +
Sbjct: 119 LYHEWDLDTEAAVGLAKQCEQAALNEDERIENSEGAAVQTGHYQYVYGNTYGFAAHRQST 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S +D PE IG AA+RT+ RL ++ I T P
Sbjct: 179 HHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQTAARRTLRRLGSRSIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ ++ L+ +SG +LYR+S+FL+DS+GKK+ + + E+PHI SF SS
Sbjct: 239 VLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKKVLPDFLNLREEPHIPRSFRSSY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T R V++NGI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVENGVIAYPVHEITVAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI M +AG
Sbjct: 415 IVGVADDALRRSSNKIGSILIAGMTVAG 442
>gi|160872408|ref|ZP_02062540.1| TldD/PmbA family protein [Rickettsiella grylli]
gi|159121207|gb|EDP46545.1| TldD/PmbA family protein [Rickettsiella grylli]
Length = 453
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/449 (42%), Positives = 297/449 (66%), Gaps = 9/449 (2%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNV 69
+ I +++++ ++++ AKK G + + GFS+ +R ++ IE N +K++ V
Sbjct: 12 ELINKQADYKNQLIELMSRAKKRGVTQVEAHIHHDTGFSISIRNQDVETIEHNRNKSLGV 71
Query: 70 IIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDF 129
+Y K G++STSDF +++ +T+ AA +IARFT D F GL + + LE NPLD
Sbjct: 72 TVYFGYKK----GSASTSDFSSQAIENTVEAACHIARFTTEDPFNGLAESHFLEKNPLDL 127
Query: 130 KLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPF 189
LY PW + A + CE +A ++ + + EN ++TQ++ + NS+GF++GYP
Sbjct: 128 DLYHPWSIDPQHAIALGKTCEAKAMAIDNRLTS-ENVVLSTQEAIHVYGNSNGFLAGYPS 186
Query: 190 SKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKC 249
S H IS IA MQRD Y+ + DP +L E + AA T+ RL A+++ST
Sbjct: 187 SLHTISCHLIAKDKMGMQRDGSYTLSRDPNQLQSFEKLAEEAANTTLKRLNARRLSTCHA 246
Query: 250 PVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSS 309
P+LF + +A +++ F ISG +LYRK++FLVD LGK +F I I E PH+L + GS+
Sbjct: 247 PILFHSEIANHVISAFLNAISGGNLYRKASFLVDYLGKSVFDKKISIYEKPHLLNALGST 306
Query: 310 SFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNL 369
FD+EGV T R++V GI+QGY L++YSA+KLG++TTGN+GG H++++ +++ + L
Sbjct: 307 PFDDEGVCTSDRVLVNEGILQGYLLNSYSARKLGLQTTGNAGGFHNILLKTSQFE----L 362
Query: 370 KEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFK 429
+++K+M GLLVTE+MG GIN +TGDYS+GA GYW+ENG+IQY VEE+TI+G L++MF+
Sbjct: 363 NDLIKQMGKGLLVTEVMGQGINLVTGDYSRGAAGYWVENGEIQYPVEEVTIAGNLKDMFQ 422
Query: 430 QIVAIGSDVLTRNSNTSGSILIENMIIAG 458
I+AIG+D+ ++S +GSI IENM+IAG
Sbjct: 423 NIIAIGNDINYKSSIQTGSIFIENMMIAG 451
>gi|421550386|ref|ZP_15996391.1| microcin-processing peptidase 1 [Neisseria meningitidis 69166]
gi|433471173|ref|ZP_20428564.1| modulator of DNA gyrase family protein [Neisseria meningitidis
68094]
gi|433477321|ref|ZP_20434644.1| modulator of DNA gyrase family protein [Neisseria meningitidis
70012]
gi|433525636|ref|ZP_20482270.1| modulator of DNA gyrase family protein [Neisseria meningitidis
69096]
gi|433538713|ref|ZP_20495193.1| modulator of DNA gyrase family protein [Neisseria meningitidis
70030]
gi|402330601|gb|EJU65948.1| microcin-processing peptidase 1 [Neisseria meningitidis 69166]
gi|432209662|gb|ELK65629.1| modulator of DNA gyrase family protein [Neisseria meningitidis
68094]
gi|432216543|gb|ELK72424.1| modulator of DNA gyrase family protein [Neisseria meningitidis
70012]
gi|432261827|gb|ELL17072.1| modulator of DNA gyrase family protein [Neisseria meningitidis
69096]
gi|432274721|gb|ELL29808.1| modulator of DNA gyrase family protein [Neisseria meningitidis
70030]
Length = 443
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/448 (45%), Positives = 282/448 (62%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKAAGATAAEADFSESIGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G + T+DF +++L DT+ AA +IAR TA D AGL D + + D
Sbjct: 63 VYV--GKRK--GRAGTADFSEQALRDTVRAAADIARHTAEDGCAGLADPELMAQHIGDPD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY W L + A +A +CE A N + I N+E V T ++ N+HGF + +
Sbjct: 119 LYHEWDLDTEAAVGLAKQCEQAALNEDERIENSEGAAVQTGHYQYVYGNTHGFAAHRQGT 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S +D PE IG AA+RT+ RL ++ I T P
Sbjct: 179 HHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQTAARRTLRRLGSRSIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ ++ L+ +SG +LYR+S+FL+DS+GKK+ + + E+PHI SF SS
Sbjct: 239 VLFDTTISGGLIGHLVGALSGGALYRQSSFLIDSIGKKVLPDFLNLREEPHIPRSFRSSY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T R V++NGI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVENGVIAYPVHEITVAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI M +AG
Sbjct: 415 IVGVADDALRRSSNKIGSILIAGMTVAG 442
>gi|386817998|ref|ZP_10105216.1| microcin-processing peptidase 1 [Thiothrix nivea DSM 5205]
gi|386422574|gb|EIJ36409.1| microcin-processing peptidase 1 [Thiothrix nivea DSM 5205]
Length = 447
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/444 (44%), Positives = 283/444 (63%), Gaps = 8/444 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+EFQ +A+ +L+ AK GA+ + ++ ++ G SV VR G +D ++ + D+ +N+ +Y
Sbjct: 12 TEFQAMAEHVLDVAKAKGATAAEVDIDKSTGLSVEVRMGAVDKLQYHRDQGINLTVYFGH 71
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
K G +ST DF K++L DT++AA IAR+T+ D + GL D + LY PW
Sbjct: 72 RK----GFASTGDFSKQALADTLDAACRIARYTSEDEYNGLADPERMANEFPKLDLYHPW 127
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L + A +A + E A +S I N+E GV + L ANSH FM ++H +S
Sbjct: 128 ELDAEMAIEMALQAETVAREHDSRITNSEGAGVDSHAGLSLYANSHDFMGVRHSTRHSLS 187
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
+ +A +G MQRD WY+ + P L+ + +G AA+RT+ RL A +STR+ PVLF
Sbjct: 188 CAVVAQEGDSMQRDYWYTVSRVPGHLESADTVGAEAAQRTVRRLHACSLSTREAPVLFVP 247
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
LA L+ ISG S YRK++FL++S+G+++F +Q+ EDP I + GS S+D EG
Sbjct: 248 QLARGLVGHLVGAISGGSQYRKASFLLNSIGQQVFPEFVQLHEDPLIRQALGSRSYDGEG 307
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V TQ+R +VK+G+IQGYFL +YSA+KLGM+TTGN+ GA +L++ D +L++
Sbjct: 308 VATQQRDIVKDGVIQGYFLGSYSARKLGMQTTGNASGASNLLLADTGVSFVD----LLQQ 363
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGL+VTEL+G GIN ITGDYS+GA GYW+ENG I + VEE+TI+G L++MFK IV I
Sbjct: 364 MGTGLMVTELIGHGINSITGDYSRGAVGYWVENGMIVHPVEEVTIAGNLKDMFKGIVGIA 423
Query: 436 SDVLTRNSNTSGSILIENMIIAGK 459
DV R S +GSILI M IAG+
Sbjct: 424 DDVDERGSIRTGSILINKMTIAGQ 447
>gi|433521663|ref|ZP_20478358.1| modulator of DNA gyrase family protein [Neisseria meningitidis
61103]
gi|432260436|gb|ELL15695.1| modulator of DNA gyrase family protein [Neisseria meningitidis
61103]
Length = 443
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/448 (45%), Positives = 282/448 (62%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKAAGATAAEADFSESIGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G + T+DF +++L DT+ AA +IAR TA D AGL D + + D
Sbjct: 63 VYV--GKRK--GRAGTADFSEQALRDTVRAAADIARHTAEDGSAGLADPELMAQHIGDPD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY W L + A +A +CE A N + I N+E V T ++ N+HGF + +
Sbjct: 119 LYHEWDLDTEAAVGLAKQCEQAALNEDERIENSEGAAVQTGHYQYVYGNTHGFAAHRQGT 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S +D PE IG AA+RT+ RL ++ I T P
Sbjct: 179 HHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQTAARRTLRRLGSRSIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ ++ L+ +SG +LYR+S+FL+DS+GKK+ + + E+PHI SF SS
Sbjct: 239 VLFDTTISGGLIGHLVGALSGGALYRQSSFLIDSIGKKVLPDFLNLREEPHIPRSFRSSY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T R V++NGI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVENGVIAYPVHEITVAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI M +AG
Sbjct: 415 IVGVADDALRRSSNKIGSILIAGMTVAG 442
>gi|254448565|ref|ZP_05062024.1| PmbA protein [gamma proteobacterium HTCC5015]
gi|198261754|gb|EDY86040.1| PmbA protein [gamma proteobacterium HTCC5015]
Length = 447
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/448 (41%), Positives = 289/448 (64%), Gaps = 10/448 (2%)
Query: 13 YSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIY 72
+ + EF++L + L+ AK GA + + +G S VR G+++ +E++ + M + +Y
Sbjct: 7 FDRVEFERLVELALDEAKGQGADQAEASVSGMDGLSASVRLGEVESLERDRSQAMGITVY 66
Query: 73 IQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLY 132
+DG K G++ST+D + ++ D + +A +IARFT D+ AGL D + + D LY
Sbjct: 67 -RDGAK---GSASTTDLSEAAVRDAVRSACSIARFTQPDDCAGLADAELMTQHFPDLDLY 122
Query: 133 TPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKH 192
PW S ++A A CE A + I N++ + + + + ANSHGFM GY S+H
Sbjct: 123 HPWAPSPEEAIEQARACEAAARGLDKRIDNSDGASLNSHEGFAVYANSHGFMHGYASSRH 182
Query: 193 IISISPIA--IKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+S + +A ++QRD Y+S P+ LD PE +G AA+R+++RL +KI TR P
Sbjct: 183 GLSCAVLAKDPATGDVQRDYAYTSMRRPQDLDSPEAVGQLAAERSVARLNPQKIRTRTAP 242
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
+LF +A L+ F I G +LYR+++FL ++LG+ +F +Q E PHI + GS+S
Sbjct: 243 ILFTPEMARSLVGSFVGAIRGGALYRRASFLENALGETLFPEFVQFHERPHIPAAMGSAS 302
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
+DNEGV TQ+R +VK+G++QGY L +YSA+KLGM TTGN+GG H+L + + +D+
Sbjct: 303 YDNEGVATQERALVKDGVLQGYVLDSYSARKLGMATTGNAGGVHNLELAAG----ADDFN 358
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M+TGLLVTE+MG G+N +TGDYS+GA G+W+ENG++ Y V EIT++G+L+ M+K
Sbjct: 359 ALLKRMDTGLLVTEMMGSGVNGVTGDYSRGAAGFWVENGELAYPVAEITVAGQLREMYKN 418
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IVAIGSD+ R+S + SIL+E IAG
Sbjct: 419 IVAIGSDLDCRSSIRTPSILLEAATIAG 446
>gi|294668670|ref|ZP_06733766.1| protein PmbA [Neisseria elongata subsp. glycolytica ATCC 29315]
gi|291309432|gb|EFE50675.1| protein PmbA [Neisseria elongata subsp. glycolytica ATCC 29315]
Length = 460
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/456 (42%), Positives = 285/456 (62%), Gaps = 9/456 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
I+ + F +S E L L+ AK+ GA+ + + +E G SV VR +I+ IE D
Sbjct: 13 IQETTMFNHSPQELSDLCAFALSTAKQKGATAAEADLSESVGQSVQVRLQEIEQIEHQQD 72
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
K++++ +Y+ K G +ST+D +++ +T AA +IAR+TA D+ AGL D +
Sbjct: 73 KSLDITVYLGQSK----GRASTADLSSRAIEETAQAALDIARYTAGDDCAGLADAELMAA 128
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
D Y W L DA ++ RCE A + I N+E G+ T F+ NSHGF+
Sbjct: 129 EFGDLDKYHEWDLPSADAVELSLRCEAAAMQADGRIKNSEGAGIQTSHYQFVYGNSHGFL 188
Query: 185 SGYPFSKHIISISPIAIKGKE-MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKK 243
++H +S + +A G MQRD WY +LD E +G AA+RT+ RL A+
Sbjct: 189 QHQQGTRHSVSCAVVAEDGNGGMQRDYWYDLARSADELDSMEAVGRTAAERTVRRLNARS 248
Query: 244 ISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHIL 303
+ T PVLF+ ++ L+ +SG SLYR+S+FL+DSLGK+I + + E+PHI
Sbjct: 249 LPTGSYPVLFDTTVSASLIGHVVGGLSGGSLYRQSSFLLDSLGKQILPEFLSLREEPHIP 308
Query: 304 GSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKT 363
++ S+ FD+EGV T+ R V++NGI+QGYFLS+YSA+KLGM+TT N+GGAH+LI+ N T
Sbjct: 309 RAWSSTYFDSEGVATRPRFVIENGIVQGYFLSSYSARKLGMQTTANAGGAHNLIL--NAT 366
Query: 364 KSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGK 423
S E+L++M TGLLVTELMG G+N +TGDYS+GA G+W+ENG IQY VEEIT++G+
Sbjct: 367 CGSQ--AELLRRMGTGLLVTELMGQGVNMLTGDYSRGAAGFWVENGVIQYPVEEITVAGR 424
Query: 424 LQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
LQ+M I + D L R+S+ GSILI +M +AG+
Sbjct: 425 LQDMLLGIEGVADDALRRSSHKVGSILIGSMTVAGQ 460
>gi|292490407|ref|YP_003525846.1| peptidase U62 modulator of DNA gyrase [Nitrosococcus halophilus
Nc4]
gi|291579002|gb|ADE13459.1| peptidase U62 modulator of DNA gyrase [Nitrosococcus halophilus
Nc4]
Length = 445
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/439 (41%), Positives = 286/439 (65%), Gaps = 8/439 (1%)
Query: 21 LAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMF 80
+A+++LN A+ +GA+ + + + G SV VR G+++ + + DK + + +Y K
Sbjct: 15 MAEEVLNEARALGATAAEVGIDAQTGLSVSVRLGEVETVAHHRDKRLRITLYFGHRK--- 71
Query: 81 YGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSID 140
G++STSD +L +T+ A +IAR+TA+D +GL + + + + L PW LS +
Sbjct: 72 -GSASTSDLRPAALQETVRGAASIARYTAADPCSGLAEPELMARDIPELDLCHPWGLSGE 130
Query: 141 DAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIA 200
+A +A RCE +F++ IV +E ++T+Q + + ANSHGF+ GY ++H +S +A
Sbjct: 131 EAIAVARRCEEAGRSFDNRIVISEGAELSTRQGYRVYANSHGFLGGYASTRHSLSCVLVA 190
Query: 201 IKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFE 260
MQRD WY+ D ++++ E +G AA+RT++RL +++ T PVLF A +A
Sbjct: 191 RTEAGMQRDYWYTRARDWREMEPAEAVGIKAARRTVARLDPRRLPTGAVPVLFAAEVASR 250
Query: 261 LLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQK 320
L F I G +LYR+S+FL+D LGK+IF S +++ E PH+ + GS++FDNEGV TQ
Sbjct: 251 LFAHFVAAIGGGALYRRSSFLLDHLGKQIFPSFVRLHEQPHLPKALGSAAFDNEGVATQA 310
Query: 321 RLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGL 380
R +V +G++QGY L +Y+A+KLGMKTTGN+GG H+L + + S +LK+MN GL
Sbjct: 311 RDIVTDGVLQGYVLGSYAARKLGMKTTGNAGGVHNLTVDPGQHDQS----ALLKQMNRGL 366
Query: 381 LVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLT 440
LVTELMG G+N +TGDYS+GA G+W++ G+IQY V EIT++ L++MF I +G+D+
Sbjct: 367 LVTELMGMGVNLVTGDYSQGAAGFWVDKGEIQYPVSEITLASNLRDMFLGIGEVGTDMEM 426
Query: 441 RNSNTSGSILIENMIIAGK 459
R + +GS+LI+ M +AG+
Sbjct: 427 RGNIRTGSVLIDGMTVAGE 445
>gi|313668691|ref|YP_004048975.1| hypothetical protein NLA_13950 [Neisseria lactamica 020-06]
gi|313006153|emb|CBN87614.1| conserved hypothetical protein [Neisseria lactamica 020-06]
Length = 443
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/448 (44%), Positives = 285/448 (63%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKAAGATAAEADFSESIGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G + T+DF +++L DT+ AA +IAR TA D AGL D + + D
Sbjct: 63 VYV--GKRK--GRAGTADFSEQALRDTVRAAADIARHTAEDGCAGLADACLMARHIGDPD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY W L + A +A +CE A + +S I N+E V T ++ N+HGF + +
Sbjct: 119 LYHEWDLDTEAAVELAKQCEQAALDTDSRIENSEGAAVQTGHYQYVYGNTHGFAAHRQST 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S+ +D PE IG AA+RT+ RL ++ I T P
Sbjct: 179 HHSISCSVVAADKTGMQRDYWYDSSCRHPDMDSPETIGQTAARRTLRRLGSRSIPTGNYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ ++ L+ +SG +LYR+S+FL+DS+GK++ S + + E+PHI SF SS
Sbjct: 239 VLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKQVLSDFLNLREEPHIPRSFRSSY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T R V++NGI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVENGVIAYPVHEITVAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + +D R+SN GSILI M +AG
Sbjct: 415 IVGVANDAWRRSSNKIGSILIAGMTVAG 442
>gi|406940866|gb|EKD73512.1| hypothetical protein ACD_45C00295G0001 [uncultured bacterium]
Length = 444
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/441 (43%), Positives = 284/441 (64%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+ +A D+L A K GAS + ++ GFSV R G ++ +E N DK +++ +Y G+
Sbjct: 11 LKSIAVDILREASKQGASAAEVDIGVNKGFSVTARMGDVESVEYNQDKVVDIAVYF--GQ 68
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G SS SD +++ + AA +IARFT D+ AGL D++ L + D LY+PW +
Sbjct: 69 RT--GASSLSDLRPEAIKSAVEAACHIARFTDKDSCAGLADKDLLAFHYPDLDLYSPWGI 126
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
++++A +A CE A + I N+E V+T + + NSH F+ Y ++H IS +
Sbjct: 127 TVEEAIDMALTCEGMALAKDKRITNSEGVQVSTTEGWHIYGNSHDFIGSYGATRHDISCA 186
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G++MQRD Y+ + D + L+ E I ++TISRL AK+++TR PV+F A
Sbjct: 187 LIAKQGEDMQRDYNYTVSCDSRLLESLEFIAHTTVEKTISRLAAKQLTTRSVPVIFAAEQ 246
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A LL F ISG +LYRK++FL+D LG++IF HIQI E PH+L S GS+ FD GV
Sbjct: 247 ARSLLGHFVSAISGGNLYRKASFLLDQLGQRIFPEHIQIDEQPHLLKSLGSAPFDENGVV 306
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T+ + + GI+ Y L YSA+KLGM+TTGN+GG H+L++ + K +L +LK M+
Sbjct: 307 TRPNVFIDRGILHSYSLGVYSARKLGMQTTGNAGGVHNLLVSTGKK----DLSALLKTMD 362
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGLL+T+LMG GIN +TGDYS+GA G+W+E GKIQY VEEITI+G L++M+ +V +G D
Sbjct: 363 TGLLITDLMGQGINLVTGDYSRGATGFWVEQGKIQYPVEEITIAGNLRDMYAHLVEVGCD 422
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R + +GSIL+E+M +AG
Sbjct: 423 VDKRGNIQTGSILLESMTVAG 443
>gi|59800854|ref|YP_207566.1| hypothetical protein NGO0411 [Neisseria gonorrhoeae FA 1090]
gi|194098154|ref|YP_002001202.1| PmbA protein [Neisseria gonorrhoeae NCCP11945]
gi|240013729|ref|ZP_04720642.1| PmbA protein [Neisseria gonorrhoeae DGI18]
gi|240016167|ref|ZP_04722707.1| PmbA protein [Neisseria gonorrhoeae FA6140]
gi|240120799|ref|ZP_04733761.1| PmbA protein [Neisseria gonorrhoeae PID24-1]
gi|254493325|ref|ZP_05106496.1| pmbA protein [Neisseria gonorrhoeae 1291]
gi|268596459|ref|ZP_06130626.1| pmbA protein [Neisseria gonorrhoeae FA19]
gi|268598591|ref|ZP_06132758.1| pmbA protein [Neisseria gonorrhoeae MS11]
gi|268600944|ref|ZP_06135111.1| pmbA protein [Neisseria gonorrhoeae PID18]
gi|268603251|ref|ZP_06137418.1| pmbA protein [Neisseria gonorrhoeae PID1]
gi|268681731|ref|ZP_06148593.1| pmbA protein [Neisseria gonorrhoeae PID332]
gi|268683958|ref|ZP_06150820.1| pmbA protein [Neisseria gonorrhoeae SK-92-679]
gi|268686203|ref|ZP_06153065.1| pmbA protein [Neisseria gonorrhoeae SK-93-1035]
gi|291044244|ref|ZP_06569953.1| PmbA protein [Neisseria gonorrhoeae DGI2]
gi|293399441|ref|ZP_06643594.1| PmbA protein [Neisseria gonorrhoeae F62]
gi|59717749|gb|AAW89154.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|193933444|gb|ACF29268.1| PmbA protein [Neisseria gonorrhoeae NCCP11945]
gi|226512365|gb|EEH61710.1| pmbA protein [Neisseria gonorrhoeae 1291]
gi|268550247|gb|EEZ45266.1| pmbA protein [Neisseria gonorrhoeae FA19]
gi|268582722|gb|EEZ47398.1| pmbA protein [Neisseria gonorrhoeae MS11]
gi|268585075|gb|EEZ49751.1| pmbA protein [Neisseria gonorrhoeae PID18]
gi|268587382|gb|EEZ52058.1| pmbA protein [Neisseria gonorrhoeae PID1]
gi|268622015|gb|EEZ54415.1| pmbA protein [Neisseria gonorrhoeae PID332]
gi|268624242|gb|EEZ56642.1| pmbA protein [Neisseria gonorrhoeae SK-92-679]
gi|268626487|gb|EEZ58887.1| pmbA protein [Neisseria gonorrhoeae SK-93-1035]
gi|291011138|gb|EFE03134.1| PmbA protein [Neisseria gonorrhoeae DGI2]
gi|291610010|gb|EFF39132.1| PmbA protein [Neisseria gonorrhoeae F62]
Length = 443
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/448 (44%), Positives = 282/448 (62%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKAAGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G + T+DF +++L DT+ AA +IAR TA D AGL D + + D
Sbjct: 63 VYV--GKRK--GRAGTADFSEQALRDTVRAAADIARHTAEDGCAGLADPELMAQHIGDPD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY W L + A +A +CE A + +S I N+E V T ++ N+HGF + +
Sbjct: 119 LYHEWDLDTEAAVGLAKQCEQAALDTDSRIENSEGAAVQTGHYQYVYGNTHGFAAHRQST 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S +D PE IG AA+RT+ RL ++ I T P
Sbjct: 179 HHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQTAARRTLRRLGSRSIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ ++ L+ +SG +LYR+S+FL+DS+GKK+ + + E+PHI SF SS
Sbjct: 239 VLFDTTVSGGLIGHLVGTLSGGALYRQSSFLIDSIGKKVLPDFLNLREEPHIPRSFRSSY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T R V++NGI++GYFL +YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDAEGVATAPRFVIQNGIVEGYFLGSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVENGVIAYPVHEITVAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI M +AG
Sbjct: 415 IVGVADDALRRSSNKIGSILIAGMTVAG 442
>gi|418288069|ref|ZP_12900589.1| protein PmbA [Neisseria meningitidis NM233]
gi|418290312|ref|ZP_12902476.1| protein PmbA [Neisseria meningitidis NM220]
gi|421542241|ref|ZP_15988351.1| microcin-processing peptidase 1 [Neisseria meningitidis NM255]
gi|421561008|ref|ZP_16006861.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM2657]
gi|372201799|gb|EHP15680.1| protein PmbA [Neisseria meningitidis NM220]
gi|372202672|gb|EHP16453.1| protein PmbA [Neisseria meningitidis NM233]
gi|402318177|gb|EJU53702.1| microcin-processing peptidase 1 [Neisseria meningitidis NM255]
gi|402339488|gb|EJU74704.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM2657]
Length = 443
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/448 (45%), Positives = 282/448 (62%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKAAGATAAEADFSESIGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G + T+DF +++L DT+ AA +IAR TA D AGL D + + D
Sbjct: 63 VYV--GKRK--GRAGTADFSEQALRDTVRAAADIARHTAEDGCAGLADACLMAKHIGDPD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY W L + A +A +CE A N + I N+E V T ++ N+HGF + +
Sbjct: 119 LYHEWDLDTEAAVGLAKQCEQAALNEDERIENSEGAAVQTGHYQYVYGNTHGFAAHRQGT 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S +D PE IG AA+RT+ RL ++ I T P
Sbjct: 179 HHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQTAARRTLRRLGSRSIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ ++ L+ +SG +LYR+S+FL+DS+GKK+ + + E+PHI SF SS
Sbjct: 239 VLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKKVLPDFLNLREEPHIPRSFRSSY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T R V++NGI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVENGVIAYPVHEITVAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI M +AG
Sbjct: 415 IVGVADDALRRSSNKIGSILIAGMTVAG 442
>gi|121634617|ref|YP_974862.1| hypothetical protein NMC0777 [Neisseria meningitidis FAM18]
gi|161869774|ref|YP_001598942.1| pmbA protein [Neisseria meningitidis 053442]
gi|416178576|ref|ZP_11610627.1| protein PmbA [Neisseria meningitidis M6190]
gi|416192607|ref|ZP_11616713.1| protein PmbA [Neisseria meningitidis ES14902]
gi|433468981|ref|ZP_20426410.1| modulator of DNA gyrase family protein [Neisseria meningitidis
98080]
gi|433492327|ref|ZP_20449421.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM586]
gi|433494404|ref|ZP_20451474.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM762]
gi|433496588|ref|ZP_20453629.1| modulator of DNA gyrase family protein [Neisseria meningitidis
M7089]
gi|433498648|ref|ZP_20455657.1| modulator of DNA gyrase family protein [Neisseria meningitidis
M7124]
gi|433500616|ref|ZP_20457602.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM174]
gi|433502720|ref|ZP_20459685.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM126]
gi|120866323|emb|CAM10064.1| hypothetical protein NMC0777 [Neisseria meningitidis FAM18]
gi|161595327|gb|ABX72987.1| pmbA protein [Neisseria meningitidis 053442]
gi|325132020|gb|EGC54718.1| protein PmbA [Neisseria meningitidis M6190]
gi|325137774|gb|EGC60349.1| protein PmbA [Neisseria meningitidis ES14902]
gi|432205374|gb|ELK61404.1| modulator of DNA gyrase family protein [Neisseria meningitidis
98080]
gi|432229116|gb|ELK84809.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM586]
gi|432231078|gb|ELK86748.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM762]
gi|432234482|gb|ELK90102.1| modulator of DNA gyrase family protein [Neisseria meningitidis
M7124]
gi|432235288|gb|ELK90904.1| modulator of DNA gyrase family protein [Neisseria meningitidis
M7089]
gi|432235907|gb|ELK91516.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM174]
gi|432240816|gb|ELK96347.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM126]
Length = 443
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/448 (45%), Positives = 281/448 (62%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKAAGATAAEADFSESIGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G + T+DF +++L DT+ AA +IAR TA D AGL D + + D
Sbjct: 63 VYV--GKRK--GRAGTADFSEQALRDTVRAAADIARHTAEDGCAGLADPELMAQHIGDPD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY W L + A A +CE A N + I N+E V T ++ N+HGF + +
Sbjct: 119 LYHEWDLDTEAAVGFAKQCEQAALNEDERIENSEGAAVQTGHYQYVYGNTHGFAAHRQGT 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S +D PE IG AA+RT+ RL ++ I T P
Sbjct: 179 HHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQTAARRTLRRLGSRSIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ ++ L+ +SG +LYR+S+FL+DS+GKK+ + + E+PHI SF SS
Sbjct: 239 VLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKKVLPDFLNLREEPHIPRSFRSSY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T R V++NGI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVENGVIAYPVHEITVAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI M +AG
Sbjct: 415 IVGVADDALRRSSNKIGSILIAGMTVAG 442
>gi|114319574|ref|YP_741257.1| microcin-processing peptidase 1 [Alkalilimnicola ehrlichii MLHE-1]
gi|114225968|gb|ABI55767.1| microcin-processing peptidase 1 [Alkalilimnicola ehrlichii MLHE-1]
Length = 452
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/453 (38%), Positives = 290/453 (64%), Gaps = 9/453 (1%)
Query: 7 NRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
+R+ + + ++ + L Q L+ A+ +GA+ + G SV VRKG++D +E + D+
Sbjct: 9 SRTSGLPASADMEALIQQALDTARTLGATGAEAGLAFDLGLSVNVRKGEVDTLEHHRDRG 68
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
++V +Y K G+++T+DF +S+ +T+ AA +IAR+T+ D GL D +
Sbjct: 69 LSVTVYFGQRK----GSANTADFRPESIRETVQAACDIARYTSEDPAHGLADPELMPRQV 124
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
+ L PW L+ ++A +A RCE I N+E GV T + + NSHGF+
Sbjct: 125 PELDLEHPWALNPEEAIDLARRCEAAGLAEKG-ITNSEGAGVATHHTLRVYGNSHGFLGH 183
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
Y ++H ++ +A +G MQRD WY+ + P+ L++ E +G AA+RT++R+ A+++ T
Sbjct: 184 YAGTRHSMNCVMVAGEGDHMQRDYWYTVDRVPEALERAEDVGREAARRTLARMGARQLGT 243
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
R+ PVLF P+A L+ F I G +LYRK++FL+D LG+ +F +Q+ E+PH
Sbjct: 244 RRVPVLFAPPMARGLIGHFIGAIRGGALYRKASFLLDQLGQPVFPDFVQMREEPHRPRGL 303
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
GS FD+EGV T++R +V++G++QGY L +YSA++LGM+TTGN+GG H+L++
Sbjct: 304 GSVPFDHEGVATRERTLVRDGVLQGYVLDSYSARRLGMQTTGNAGGVHNLVV----EPGP 359
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
D+ +LK+M TGLLVTE+MG G+N +TGDYS+GA G+W+E+G+I + V+EIT++G L+
Sbjct: 360 DDQAALLKRMGTGLLVTEMMGQGVNPVTGDYSRGATGFWVEDGEIAHPVQEITVAGNLRE 419
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M+ + A+G DV R + +GS+L++ M +AG+
Sbjct: 420 MYAGLTAVGCDVDRRGNIHTGSLLVDAMTVAGE 452
>gi|421567276|ref|ZP_16013012.1| microcin-processing peptidase 1 [Neisseria meningitidis NM3001]
gi|402344287|gb|EJU79428.1| microcin-processing peptidase 1 [Neisseria meningitidis NM3001]
Length = 443
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/448 (45%), Positives = 282/448 (62%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKAAGATAAEADFSESIGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G + T+DF +++L DT+ AA +IAR TA D AGL D + + D
Sbjct: 63 VYV--GKRK--GRAGTADFSEQALRDTVRAAADIARHTAEDGCAGLADACLMAKHIGDPD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY W L + A +A +CE A N + I N+E V T ++ N+HGF + +
Sbjct: 119 LYHEWDLDTEAAVGLAKQCEQAALNEDERIENSEGAAVQTGHYQYVYGNTHGFAAHRQGT 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S +D PE IG AA+RT+ RL ++ I T P
Sbjct: 179 HHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQTAAERTLRRLNSRSIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ ++ L+ +SG +LYR+S+FL+DS+GKK+ + + E+PHI SF SS
Sbjct: 239 VLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKKVLPDFLNLREEPHIPRSFRSSY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T R V++NGI++GYFLS+YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G N ITGDYS+GA G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVENGVIAYPVHEITVAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI M +AG
Sbjct: 415 IVGVADDALRRSSNKIGSILIAGMTVAG 442
>gi|407716907|ref|YP_006838187.1| peptidase U62 modulator of DNA gyrase [Cycloclasticus sp. P1]
gi|407257243|gb|AFT67684.1| Peptidase U62 modulator of DNA gyrase [Cycloclasticus sp. P1]
Length = 451
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/442 (43%), Positives = 285/442 (64%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
+ + +A D+L AKK GA + G G SV R G+++ IE + D+ + + +Y
Sbjct: 17 QLKNIAADILLEAKKQGADQVETAISVGQGLSVNARLGEVETIEHHRDQGIGITVY---- 72
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++S++ ++ + ++AA IA++ D F+GLP++ L D LY PW
Sbjct: 73 KGHKKGSASSTKLDSAAIKEMVSAACAIAKYAEEDPFSGLPEQQYLATTFPDLSLYHPWT 132
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
+S D+A +A RCE+ A ++ I N+E + T + +LANS GF GYP S+H +S
Sbjct: 133 ISADEAIEMAVRCEDAARFYDKDISNSEGASIQTFEGTRVLANSLGFNHGYPASRHSMSC 192
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
S I + MQRD WY+ +D + +G A+KRTI+RL AK ISTRK P++F A
Sbjct: 193 SVIGERNGTMQRDYWYTVARQASAMDDAKKVGEMASKRTINRLGAKAISTRKSPIMFAAE 252
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
++ L+ F I G +LYRKS+FL+DSLG+++F S I I E P + + GS+++D+EGV
Sbjct: 253 VSGGLIGHFISAIRGGNLYRKSSFLLDSLGQQVFPSFIDIYEQPLLAQAMGSATYDSEGV 312
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T R +VK G+++GY LS+YSA+KLGMKTT N+GG H+L + S + + MLK+M
Sbjct: 313 ATSARNIVKAGVVEGYVLSSYSARKLGMKTTANAGGVHNLTVKSGEL----DFNGMLKEM 368
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
NTGLLVTEL+G G+N +TGDYS+GA G+W+ENG IQ+ VEE+TI+G L+++++ IVA+G+
Sbjct: 369 NTGLLVTELIGQGVNTMTGDYSRGAAGFWVENGVIQFPVEEVTIAGNLKDIYQSIVAVGN 428
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
DV R + +GSIL+ M IAG
Sbjct: 429 DVDLRGNTRTGSILVSEMTIAG 450
>gi|88811880|ref|ZP_01127133.1| pmbA protein [Nitrococcus mobilis Nb-231]
gi|88790764|gb|EAR21878.1| pmbA protein [Nitrococcus mobilis Nb-231]
Length = 453
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/450 (40%), Positives = 281/450 (62%), Gaps = 8/450 (1%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNV 69
+ + +K+E + + L A + GA+ + + G SV VR+G++D +E D+ + +
Sbjct: 12 RQLPAKAELAEPLGEALEEATRQGATAAEASVSSSFGLSVKVRQGEVDTLEHMRDRGLAI 71
Query: 70 IIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDF 129
+Y K G +S++DF + SL +T+ AA +IAR+T+ D AGL D + + D
Sbjct: 72 TVYFGQRK----GTASSADFSRASLVETVRAACDIARYTSEDPCAGLADAALMSTDAPDL 127
Query: 130 KLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPF 189
+L+ W + + A +A CE A + + N+E V+T Q + N+HGF+ GYP
Sbjct: 128 RLHYRWDIEPETAIDLARECEAAALGVDPRLTNSEGAEVSTHQGIHVYGNTHGFLDGYPA 187
Query: 190 SKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKC 249
S+H IS + + G+ MQRD WY++ DP L ++G A +RT+ RL A+++STR
Sbjct: 188 SQHSISCAVLGRSGESMQRDYWYTTARDPSALQTATVVGQEAGRRTVQRLGARRLSTRTV 247
Query: 250 PVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSS 309
PVLF A L F I G+SLYRK++FL+DSL ++F + + I E PH+ + GS+
Sbjct: 248 PVLFTPTAARSLFGHFLGAIQGSSLYRKASFLLDSLDTQVFPNWLSIEEQPHLPSALGSA 307
Query: 310 SFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNL 369
FD EGV T+ R +V+ G+++GY LS+YSA+KLGMKTTGN+GG H+L++ S
Sbjct: 308 PFDGEGVATRPRTLVEQGMLRGYVLSSYSARKLGMKTTGNAGGIHNLVVHPGAMDYS--- 364
Query: 370 KEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFK 429
++L+ M+ GL+V+ LMG G+N ITGDYS+GA G+W++ G++ Y VEEITI+G L+ MF+
Sbjct: 365 -QLLQDMHQGLVVSHLMGQGVNLITGDYSRGAAGFWVDKGEVVYPVEEITIAGHLKEMFE 423
Query: 430 QIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+I A+G DV R + +GS+L+E M +AG+
Sbjct: 424 RIRAVGLDVDIRGNIRTGSVLVEGMTVAGE 453
>gi|268594463|ref|ZP_06128630.1| pmbA protein [Neisseria gonorrhoeae 35/02]
gi|385335335|ref|YP_005889282.1| hypothetical protein NGTW08_0447 [Neisseria gonorrhoeae
TCDC-NG08107]
gi|268547852|gb|EEZ43270.1| pmbA protein [Neisseria gonorrhoeae 35/02]
gi|317163878|gb|ADV07419.1| hypothetical protein NGTW08_0447 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 443
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/448 (44%), Positives = 281/448 (62%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F ++ SE L + L+ AK GA+ + +F+E G SV VR G+I+ IE DK++++
Sbjct: 3 FNHTASELLDLCRRTLDLAKAAGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLDIT 62
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ GK+ G + T+DF +++L DT+ AA +IAR TA D AGL D + + D
Sbjct: 63 VYV--GKRK--GRAGTADFSEQALRDTVRAAADIARHTAEDGCAGLADPELMAQHIGDPD 118
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY W L + A +A +CE A + +S I N+E V T ++ N+HGF + +
Sbjct: 119 LYHEWDLDTEAAVGLAKQCEQAALDTDSRIENSEGAAVQTGHYQYVYGNTHGFAAHRQST 178
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A MQRD WY S +D PE IG AA+RT+ RL ++ I T P
Sbjct: 179 HHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQTAARRTLRRLGSRSIPTGSYP 238
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ ++ L+ +SG +LYR+S+FL+DS+GKK+ + + E+PHI SF SS
Sbjct: 239 VLFDTTVSGGLIGHLVGTLSGGALYRQSSFLIDSIGKKVLPDFLNLREEPHIPRSFRSSY 298
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T R V++NGI++GYFL +YSA+KLGM+TTGN+GGAH+L + SD
Sbjct: 299 FDAEGVATAPRFVIQNGIVEGYFLGSYSARKLGMQTTGNAGGAHNLYLNHTHETQSD--- 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G N ITGDYS+G G+W+ENG I Y V EIT++G+LQ+M++
Sbjct: 356 -LLKEMGTGLLVTELMGQGANTITGDYSRGVAGFWVENGVIAYPVHEITVAGRLQDMYRD 414
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+SN GSILI M +AG
Sbjct: 415 IVGVADDALRRSSNKIGSILIAGMTVAG 442
>gi|406936003|gb|EKD69827.1| hypothetical protein ACD_46C00721G0001 [uncultured bacterium]
Length = 446
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/435 (44%), Positives = 283/435 (65%), Gaps = 8/435 (1%)
Query: 24 DMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGN 83
D+L AKK+GA + + GF+V R+ ++ +E + DK + + ++ GK+ G+
Sbjct: 19 DILREAKKLGADQAEVNITANKGFNVMARENDVETVEYHQDKVIEITVFF--GKR--SGS 74
Query: 84 SSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAK 143
+S SD ++ + AA +IA+FT D AGL D++ + N L L PW ++++ A
Sbjct: 75 ASLSDIRSDAVRSAVEAACHIAKFTDEDPAAGLADKSDIAFNYLQLPLAYPWNITVEQAI 134
Query: 144 LIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKG 203
+A +CE EA ++ I++ E V T Q + ANS+GF+ +PF++H +S +A G
Sbjct: 135 ELACQCEREAVAYDKRIMSAEEVSVATSQVLHVHANSYGFLGIFPFTRHDVSCVLVAKDG 194
Query: 204 KEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLN 263
+MQRD Y+ +DPK L+ + AA RTI RL A++I T K PV+F A A L+
Sbjct: 195 NDMQRDYSYTVAADPKHLESISHVAKEAAMRTIKRLGARRIPTMKAPVIFAAEEARGLIG 254
Query: 264 IFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLV 323
FA I+G+++YRKS+FLVD LGK++F + + E PH++ GS+ FD++GV T+ +
Sbjct: 255 HFASAIAGSNIYRKSSFLVDHLGKQVFPKFMFMQEQPHLIRGLGSAPFDDDGVATRDNIF 314
Query: 324 VKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVT 383
+++GI+Q Y L YSA+KLGMKTTGN+GG H+LI+ + NL +LK+M TGLLVT
Sbjct: 315 IQDGILQNYSLGVYSARKLGMKTTGNAGGMHNLIV----KHGNQNLAALLKQMGTGLLVT 370
Query: 384 ELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNS 443
ELMG G+N +TGDYS+GA GYW+ENG+IQY V EITI+GKL +M+ IV IG+DV TR +
Sbjct: 371 ELMGQGVNILTGDYSRGAGGYWVENGEIQYPVHEITIAGKLPDMYTNIVDIGNDVDTRGN 430
Query: 444 NTSGSILIENMIIAG 458
+GSILIE M+IAG
Sbjct: 431 VHTGSILIEEMMIAG 445
>gi|381400917|ref|ZP_09925836.1| PmbA protein [Kingella kingae PYKK081]
gi|380834201|gb|EIC14050.1| PmbA protein [Kingella kingae PYKK081]
Length = 442
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/448 (41%), Positives = 282/448 (62%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +S Q A+ +L AK GA+ + ++ +E G SV VR I+ IE DK++++
Sbjct: 2 FQHSAHNLSQTAETVLQLAKLNGATAAEVDLSESLGQSVQVRLQDIEQIEHQQDKSLDIT 61
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ K G +ST+D +++ DT+ AA IAR+TA D+ +GL D + + + D
Sbjct: 62 VYVGQRK----GRASTADLSPQAIADTVQAACAIARYTAEDDCSGLADADLMAQHIGDLD 117
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y W LSI+ A +A +CE A +F++ I N++ V+T F+ AN+HGF +
Sbjct: 118 KYHEWQLSIEQAVELAKQCEQAALDFDARIQNSDGANVSTSHYQFVYANTHGFCQHQRGT 177
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A M+RD WY S+ D ++D E IG AA+RT+SRL A+ I+T
Sbjct: 178 CHSISCSLVAADAAGMERDYWYDSDCDAAQMDSVEQIGRIAAQRTVSRLNARSIATGSYS 237
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+ + ++ L+ +SG++LYR+++FL DSLGK I +H+ + E+PHI + GS+
Sbjct: 238 VVLDTTVSGSLIGHLVGGLSGSALYRQTSFLCDSLGKTILPTHLHLREEPHIPRALGSTY 297
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGV TQ R V++NG++QGYFL +YSA+KLGM++TGN+GGAH+L + + + D+
Sbjct: 298 FDSEGVATQPRFVIENGVVQGYFLGSYSARKLGMQSTGNAGGAHNLHL----SHTHDSQA 353
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+L+ M TGLL+TELMG G+N +TGDYS+GA G+W+ENG I Y V ITI+G L +M +
Sbjct: 354 ALLRDMGTGLLITELMGQGVNMLTGDYSRGAAGFWVENGVIAYPVSGITIAGSLHDMLRG 413
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I + D L R+ + GSI ++ M +AG
Sbjct: 414 IAGVADDSLRRSGSKIGSIWLDKMTVAG 441
>gi|303257755|ref|ZP_07343767.1| PmbA protein [Burkholderiales bacterium 1_1_47]
gi|331001193|ref|ZP_08324820.1| protein PmbA [Parasutterella excrementihominis YIT 11859]
gi|302859725|gb|EFL82804.1| PmbA protein [Burkholderiales bacterium 1_1_47]
gi|329569125|gb|EGG50917.1| protein PmbA [Parasutterella excrementihominis YIT 11859]
Length = 451
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/452 (41%), Positives = 276/452 (61%), Gaps = 4/452 (0%)
Query: 7 NRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
+++ I S E L L+ A +GA+ +S+E +E G V VR + + IE +D++
Sbjct: 2 SQTPTISSSEELGSLVSHALDTALSLGATSASVEVSEEKGTCVTVRNRETESIEHTHDRD 61
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ +Y+ K + +S+ DF K+S+ T+ AA ++AR+T D GLPD+ L NP
Sbjct: 62 FGITVYLGKSKAV----ASSGDFRKESILRTVKAALDMARYTTPDECNGLPDKERLCTNP 117
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
L+ PW +SI++ A E A + + +VN++ VTT F+L N+ GF+ G
Sbjct: 118 RQLDLFHPWNISIEEQVQKAVEAEKAALSVDKRVVNSDGAMVTTTIGSFILGNTEGFLHG 177
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
YPFS H I S IA MQ +W++S L P+ +G A +R + L A+ +ST
Sbjct: 178 YPFSDHSIDTSVIAEDQNGMQVGSWHTSGVSSMDLLSPQQVGMIAGQRAVDHLSARGLST 237
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
RKCPV+FEAP+A L F SG++LYRK++FL L K IF H+ I+E+P I +
Sbjct: 238 RKCPVVFEAPVAKSLFRTFVHAASGSALYRKTSFLEGMLNKPIFPDHLSILENPFIPRYW 297
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
GS+ FD+EGV+ +RLVV +G++ G FLS+YSA+KLGM TTGN+GG ++LI S
Sbjct: 298 GSAPFDDEGVRPSERLVVDHGVLSGLFLSSYSARKLGMTTTGNAGGPYNLIFSEAPEASE 357
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
L +L +M TGLLVTEL+G G+NY TGD+SKGA G+W+ENG+I Y VE IT++G L++
Sbjct: 358 KTLSALLSRMGTGLLVTELIGQGVNYTTGDFSKGASGFWVENGRIAYPVEGITVAGNLRD 417
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+F I A+ DV SGS+LI+ M +AG
Sbjct: 418 IFMSIEAMSDDVDLNGCYLSGSVLIKEMTVAG 449
>gi|253687540|ref|YP_003016730.1| peptidase U62 modulator of DNA gyrase [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251754118|gb|ACT12194.1| peptidase U62 modulator of DNA gyrase [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 454
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/442 (41%), Positives = 289/442 (65%), Gaps = 5/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q LA D+L++A GAS + + ++GN ++ VR G ID + QN + ++V +Y G+
Sbjct: 18 LQSLAGDVLDFAAAKGASQAVVSVSQGNRRTIRVRNGDIDTLTQNQSRFLSVTVYF--GQ 75
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G+ S++ F +++L D ++AA +A++ D +GLP+ + D L++ L
Sbjct: 76 RA--GSVSSTLFSREALRDAVDAASTLAKYADEDPCSGLPEPQHFARDIYDLALHSTDTL 133
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+++ A +A R E +A N +E+T +T+QQ F+LANS GF +GYP S H +
Sbjct: 134 TVEQALSLALRAE-QAANSTHEHGYSESTEITSQQGDFILANSAGFSAGYPTSLHTLWSH 192
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA + Q+ W++ P L +PE IG AA+R +++L A+K+STR+CPVLFEAP
Sbjct: 193 AIARNETQRQQGFWHTVGRAPSLLAEPEAIGHTAARRAVAQLGARKLSTRRCPVLFEAPA 252
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L++ +SG SLYR ++FL LG+ I + H+ + E+P I G+ S+ FD EGV
Sbjct: 253 AHSLIHHLVGALSGASLYRSTSFLGQCLGEAITAPHLSLYENPLIPGALASACFDTEGVA 312
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
R V+++GI QGYFLS+YSA++LG+ TTG++GGA++L + S++ +D+L +L++M+
Sbjct: 313 AVPRHVIRDGIAQGYFLSSYSARRLGLTTTGHAGGAYNLTLSSSQNPPADDLPMLLRRMH 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGLLVT L+G G+N +TGDYS+G G+W+ENG IQY VEEITI+G L+ + Q VA+G+D
Sbjct: 373 TGLLVTTLLGHGLNPMTGDYSQGVAGFWVENGDIQYPVEEITIAGNLKTLLLQCVALGAD 432
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
+ T+ + + GS+LIE M IAG+
Sbjct: 433 IHTQGNLSCGSLLIEEMQIAGQ 454
>gi|403057616|ref|YP_006645833.1| peptidase U62 modulator of DNA gyrase [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402804942|gb|AFR02580.1| peptidase U62 modulator of DNA gyrase [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 454
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/442 (41%), Positives = 290/442 (65%), Gaps = 5/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q LA D+L++A GAS + + ++GN ++ VR G ID + QN + ++V +Y G+
Sbjct: 18 LQSLAGDVLDFAAAKGASQAVVSVSQGNRRTIRVRNGDIDTLTQNQSRFLSVTVYF--GQ 75
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G S++ F K++L D ++AA +A++ D +GLP+ + D L+ L
Sbjct: 76 RA--GTVSSTLFSKEALQDAVDAASTLAKYADEDPCSGLPEAQHFARDIYDLALHNADTL 133
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+++ A +A R E +A N +E+T +T+QQ F+LANS GF +GYP S H +
Sbjct: 134 TVEQALSLALRAE-QAANTTHEHGYSESTEITSQQGDFILANSAGFSAGYPTSLHTLWSH 192
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA + Q+ W+++ P L PE IG AA+R +++L A+K+STR+CPVLF+AP+
Sbjct: 193 AIARNDTQRQQGFWHTTGRAPSLLATPETIGHTAAQRAVAQLGARKLSTRRCPVLFDAPV 252
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L++ +SG +LYR ++FL LG+ I + H+ + E+P I G+ S+ FD EGV
Sbjct: 253 AHSLVHHLVGALSGAALYRSTSFLGQCLGETITAPHLSLYENPFIPGALASACFDTEGVA 312
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
R V+ +G+ QGYFLS+YSA++LG+ TTG++GGA++L + S+++++ D+L +L++M+
Sbjct: 313 ATPRHVIHDGVAQGYFLSSYSARRLGLTTTGHAGGAYNLTVSSSQSRNDDDLPALLRQMH 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGLLVT L+G G+N +TGDYS+G G+W+ENG+IQY VEEITI+G L+ + Q VA+G+D
Sbjct: 373 TGLLVTTLLGHGLNPMTGDYSQGVAGFWVENGEIQYPVEEITIAGNLKTLLLQCVALGAD 432
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
+ T+ + + GS+LIE M IAG+
Sbjct: 433 IHTQGNLSCGSLLIEEMQIAGQ 454
>gi|198282889|ref|YP_002219210.1| peptidase U62 modulator of DNA gyrase [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218666455|ref|YP_002425090.1| pmbA protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198247410|gb|ACH83003.1| peptidase U62 modulator of DNA gyrase [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218518668|gb|ACK79254.1| pmbA protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 448
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/444 (46%), Positives = 280/444 (63%), Gaps = 9/444 (2%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
S Q+ DML+ A++ GAS + + G G SV VR G+++ IE + DK + V +Y+
Sbjct: 12 SVLTQIVDDMLHLAREQGASAAEASASTGKGLSVTVRLGEVESIEYHQDKGLGVTVYLGQ 71
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
K G++STSDF +K+L +T++AA IAR TA+D FAGL D D LY PW
Sbjct: 72 SK----GSASTSDFSRKALSETVSAALTIARHTAADPFAGLADPELFAKTFPDLDLYHPW 127
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
+ D A +A RCE A + I N+E + T + + NS GFM S+H +S
Sbjct: 128 SIDADSAADLARRCEAAARESDPRIHNSEGGSLGTGEGSSVYGNSLGFMGSSRSSRHSLS 187
Query: 196 ISPIA-IKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S IA + MQRD WY L PE IG AA+R + RL A+K++T K PVLFE
Sbjct: 188 CSVIAEDRNGGMQRDYWYDVARAADALATPETIGRTAAQRALRRLDARKVATTKAPVLFE 247
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L+ A ISG+SLYRKS+FLVDSLGK++F H+++ E+P GS SFD E
Sbjct: 248 NQVASSLIGHLASAISGSSLYRKSSFLVDSLGKQLFPEHVRVYEEPLRRRGLGSCSFDGE 307
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV T+ R +V G+++GY L +YSA+KL MKTTGN+GGAH+L + K +L E+L
Sbjct: 308 GVATRNRDIVSGGVLEGYILDSYSARKLNMKTTGNAGGAHNLTLQPGKA----SLDELLH 363
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M GLLVTEL+G GIN +TGDYS+GA G+W+E+G+IQY VEEITI+G LQ MF+ + A+
Sbjct: 364 QMGHGLLVTELIGFGINMVTGDYSRGAAGFWVEHGEIQYPVEEITIAGTLQGMFQGMRAV 423
Query: 435 GSDVLTRNSNTSGSILIENMIIAG 458
G+D+L + SILI+ M+IAG
Sbjct: 424 GNDLLIHGNTGCPSILIDEMMIAG 447
>gi|387131198|ref|YP_006294088.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Methylophaga sp. JAM7]
gi|386272487|gb|AFJ03401.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Methylophaga sp. JAM7]
Length = 441
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/445 (41%), Positives = 277/445 (62%), Gaps = 8/445 (1%)
Query: 13 YSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIY 72
Y+++ + A L +A+K+GAS + + + G G S+ VR+ +I+ +E NND + V ++
Sbjct: 4 YNEAALIEAADIALQHARKLGASEAEVGVSFGRGLSISVRQAEIETLEHNNDTGLAVTVF 63
Query: 73 IQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLY 132
+ K ++STSD +++ + + A NIARFT D +AGLP+ + + D LY
Sbjct: 64 LGKSKA----SASTSDLRPEAIQEAVAMACNIARFTQEDAYAGLPEASLMATTFPDLSLY 119
Query: 133 TPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKH 192
PW +S D A +A +CE + +S I N+E V+T + + NSHGF+ S+H
Sbjct: 120 HPWDISPDAAIELAMQCEQAGRDVDSRISNSEGASVSTHEGLRVYGNSHGFIGSRASSQH 179
Query: 193 IISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252
I S IA MQRD WY L IG AA+RT++RL + ++T PVL
Sbjct: 180 SIGCSLIAKDATGMQRDYWYDQARRAADLQDVVTIGKRAAQRTLARLSPQTVTTGHYPVL 239
Query: 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFD 312
F A +A L I G +LYR+S+FL+D LGK+IF + I E PH+ + GS+SFD
Sbjct: 240 FSAEIAGSLFGQLIAAIRGGALYRQSSFLLDKLGKQIFPEFMHIHEQPHLPTAMGSASFD 299
Query: 313 NEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEM 372
EGV TQ R ++++GI+QGY L TYSA+KLGM+TT N+GG H+L + + + +
Sbjct: 300 AEGVATQARDIIRDGILQGYVLDTYSARKLGMQTTANAGGVHNLTVAPGPM----DFEGL 355
Query: 373 LKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIV 432
LK+M+TG++VTE MG G N +TGDYS+GA G+W+ENG IQ++++E TI+G LQ+MFK IV
Sbjct: 356 LKQMDTGVIVTETMGMGTNIVTGDYSQGAAGFWVENGTIQHAIDEFTIAGSLQSMFKDIV 415
Query: 433 AIGSDVLTRNSNTSGSILIENMIIA 457
A+G+DV R + SGS+LI+ M++A
Sbjct: 416 AVGNDVDLRGNTRSGSVLIQQMMVA 440
>gi|333375197|ref|ZP_08467021.1| U62 family microcin-processing peptidase [Kingella kingae ATCC
23330]
gi|332971614|gb|EGK10564.1| U62 family microcin-processing peptidase [Kingella kingae ATCC
23330]
Length = 454
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/448 (41%), Positives = 280/448 (62%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +S Q A+ +L AK GA+ + ++ +E G SV VR I+ IE DK++++
Sbjct: 14 FQHSAHNLSQTAETVLQLAKLNGATAAEVDLSESLGQSVQVRLQDIEQIEHQQDKSLDIT 73
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ K G +ST+D +++ DT+ AA IAR+TA D+ +GL D N + + D
Sbjct: 74 VYVGQRK----GRASTADLSPQAIADTVQAACAIARYTAEDDCSGLADANLMAQHIGDLN 129
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y W LS A +A +CE A +F++ I N++ V+T F+ AN+HGF +
Sbjct: 130 KYHEWQLSSKQAVELAKQCEQAALDFDARIQNSDGANVSTSHYQFVYANTHGFCQHQRGT 189
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
H IS S +A M+RD WY S+ D ++D E IG AA+RT+SRL A+ I+T
Sbjct: 190 CHSISCSLVAADAAGMERDYWYDSDCDAAQMDSVEQIGRIAAQRTVSRLNARSIATGSYS 249
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+ + ++ L+ +SG++LYR+++FL DSLGK I +H+ + E+PHI + GS+
Sbjct: 250 VVLDTTVSGSLIGHLVGGLSGSALYRQTSFLCDSLGKTILPTHLHLREEPHIPRALGSTY 309
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGV TQ R V++NG++QGYFL +YSA+KLGM++TGN+GGAH+L + + + D+
Sbjct: 310 FDSEGVATQPRFVIENGVVQGYFLGSYSARKLGMQSTGNAGGAHNLHL----SHTHDSQA 365
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+L+ M TGLL+TELMG G+N +TGDYS+GA G+W+ENG I Y V ITI+G L +M +
Sbjct: 366 ALLRDMGTGLLITELMGQGVNMLTGDYSRGAAGFWVENGVIAYPVSGITIAGSLHDMLRG 425
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I + D L R+ + GSI ++ M +AG
Sbjct: 426 IAGVADDSLRRSGSKIGSIWLDKMTVAG 453
>gi|415986150|ref|ZP_11559644.1| pmbA protein [Acidithiobacillus sp. GGI-221]
gi|339834811|gb|EGQ62545.1| pmbA protein [Acidithiobacillus sp. GGI-221]
Length = 448
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/444 (45%), Positives = 280/444 (63%), Gaps = 9/444 (2%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
S Q+ DML+ A++ GAS + + G G SV VR G+++ IE + DK + V +Y+
Sbjct: 12 SVLTQIVDDMLHLAREQGASAAEASASTGKGLSVTVRLGEVESIEYHQDKGLGVTVYLGQ 71
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
K G+++TSDF +K+L +T++AA IAR TA+D FAGL D D LY PW
Sbjct: 72 SK----GSAATSDFSRKALSETVSAALTIARHTAADPFAGLADPELFAKTFPDLDLYHPW 127
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
+ D A +A RCE A + I N+E + T + + NS GFM S+H +S
Sbjct: 128 SIDADSAADLARRCEAAARESDPRIHNSEGGSLGTGEGSSVYGNSLGFMGSSRSSRHSLS 187
Query: 196 ISPIA-IKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S IA + MQRD WY L PE IG AA+R + RL A+K++T K PVLFE
Sbjct: 188 CSVIAEDRNGGMQRDYWYDVARAADALATPETIGRTAAQRALRRLDARKVATTKAPVLFE 247
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L+ A ISG+SLYRKS+FLVDSLGK++F H+++ E+P GS SFD E
Sbjct: 248 NQVASSLIGHLASAISGSSLYRKSSFLVDSLGKQLFPEHVRVYEEPLRRRGLGSCSFDGE 307
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV T+ R +V G+++GY L +YSA+KL MKTTGN+GGAH+L + K +L E+L
Sbjct: 308 GVATRNRDIVSGGVLEGYILDSYSARKLNMKTTGNAGGAHNLTLQPGKA----SLDELLH 363
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M GLLVTEL+G GIN +TGDYS+GA G+W+E+G+IQY VEEITI+G LQ MF+ + A+
Sbjct: 364 QMGHGLLVTELIGFGINMVTGDYSRGAAGFWVEHGEIQYPVEEITIAGTLQGMFQGMRAV 423
Query: 435 GSDVLTRNSNTSGSILIENMIIAG 458
G+D+L + SILI+ M+IAG
Sbjct: 424 GNDLLIHGNTGCPSILIDEMMIAG 447
>gi|392307065|ref|ZP_10269599.1| hypothetical protein PcitN1_00215 [Pseudoalteromonas citrea NCIMB
1889]
Length = 449
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/449 (41%), Positives = 282/449 (62%), Gaps = 9/449 (2%)
Query: 12 IYSK-SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
IY + + +Q ++L +AKK+GA+ S + +G SV R G++D IE N D + +
Sbjct: 9 IYQQIDDVKQAVSEVLAHAKKLGATASEAAMSSTSGLSVSTRMGEVDTIEFNQDGGLGIS 68
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ + K G++ST+D +L + A +IA+FT+ D G+ DE LEM+P D
Sbjct: 69 VYVGNHK----GSASTADLSPAALRSVVEKAIDIAKFTSDDPCNGVADEQLLEMSPPDLD 124
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW +S + E A F+S IVN++ + Q + NSHG ++G+P +
Sbjct: 125 LYHPWDVSPEQGIEFCLEAEKAALEFDSRIVNSDGASFASHQGLRVYGNSHGLVAGFPRT 184
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H +S I G+ MQRD+ Y+ + + L ++G AA+ T+++L ++KI T K P
Sbjct: 185 RHTLSTMVIGQDGEHMQRDSAYTISREQSGLKGAGLVGVEAAESTLAKLNSQKIKTMKSP 244
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F A +A L I G +LYRKSTFL++SL ++F+ + I+E PH+L SS
Sbjct: 245 VVFRADIANSLFGHLVSAIGGGALYRKSTFLLESLNTQVFNPCVSIMERPHLLKGLASSP 304
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGVKT+ R ++ G +Q Y L++Y+A+KLGM TG++GG H+ ++ ++ D+L
Sbjct: 305 FDSEGVKTRDRDIISGGELQTYLLASYAARKLGMTATGHAGGIHNWLV----QQTHDDLH 360
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+L+ M TGLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G LQ+MFK
Sbjct: 361 AVLQTMGTGLLVTELMGQGVNTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLQDMFKG 420
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
I AIG D+ R S +GS+LIE+M +AG+
Sbjct: 421 IQAIGGDIEVRGSVQTGSVLIESMQVAGE 449
>gi|255020811|ref|ZP_05292867.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Acidithiobacillus caldus ATCC 51756]
gi|340781380|ref|YP_004747987.1| TldE/TldD proteolytic complex protein TldE/PmbA [Acidithiobacillus
caldus SM-1]
gi|254969602|gb|EET27108.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Acidithiobacillus caldus ATCC 51756]
gi|340555533|gb|AEK57287.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Acidithiobacillus caldus SM-1]
Length = 447
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/445 (45%), Positives = 279/445 (62%), Gaps = 8/445 (1%)
Query: 14 SKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYI 73
S +E + + L A+++GAS + + G SV VR G+++ IE + DK++ V +Y+
Sbjct: 10 SAAELSAIVEQALGLARRVGASAAEASASSSKGLSVSVRLGEVESIEYHRDKSLGVTVYV 69
Query: 74 QDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYT 133
K G++STSDF K+L +T+ AA IAR T +D AGL D L D LY
Sbjct: 70 GQAK----GSASTSDFSAKALEETVQAALAIARHTFADPHAGLADPAWLAREFPDLDLYH 125
Query: 134 PWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHI 193
PW + D A +A RCE A + + I N+E V T + + NS F+ S+H
Sbjct: 126 PWDIDADAAAELARRCEAAARDSDPRICNSEGASVATGEGLTVYGNSEDFLGVSRGSRHS 185
Query: 194 ISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLF 253
+S S +A + MQRD WY + K L E IG AA+RT+ RL A+KI+T + PVLF
Sbjct: 186 LSCSVLAGDDQGMQRDYWYDVARNAKALAAAEDIGRIAAQRTLRRLGARKIATTRAPVLF 245
Query: 254 EAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDN 313
E +A LL FA ISG +LYR+S+FL DSLGK+IF+ I+I E+P GS+SFD
Sbjct: 246 ENQVAASLLGHFASAISGGNLYRRSSFLQDSLGKRIFAEGIRIYEEPLRPRGLGSASFDA 305
Query: 314 EGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEML 373
EGV T R +V++G++QGY L +YSA+KL M +TGN+GGAH+L + +LKE+L
Sbjct: 306 EGVATHDRDLVQDGVLQGYLLDSYSARKLDMASTGNAGGAHNLTL----NPGQGHLKELL 361
Query: 374 KKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVA 433
M GLLVTEL+G G+N +TGDYS+GA G+W+ENG+IQY VEEITI+G LQ+MF +IVA
Sbjct: 362 HTMGRGLLVTELIGFGVNTLTGDYSRGAAGFWVENGEIQYPVEEITIAGTLQDMFARIVA 421
Query: 434 IGSDVLTRNSNTSGSILIENMIIAG 458
+G D+L + S+LIE+M IAG
Sbjct: 422 VGEDMLIHGNVGCPSVLIEDMTIAG 446
>gi|350570762|ref|ZP_08939108.1| U62 family microcin-processing peptidase [Neisseria wadsworthii
9715]
gi|349794710|gb|EGZ48520.1| U62 family microcin-processing peptidase [Neisseria wadsworthii
9715]
Length = 442
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/448 (43%), Positives = 280/448 (62%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +S E +L +L+ AK+ GA+ + + +E G SV VR +I+ IE DK++++
Sbjct: 2 FHHSSEEMGRLCAQVLDLAKQKGATAAEADLSESLGQSVQVRLQQIEQIEYQQDKSLDLT 61
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ K G +ST+DF +L +T+ +A +IA++TA D+ AGL D + D
Sbjct: 62 VYVGQRK----GRASTADFSPTALAETVQSAIDIAKYTAEDDCAGLADAELIANQFGDLD 117
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y W LS +DA +A RCE A + + I N+E GV T F+ N+HGF+ +
Sbjct: 118 KYHEWNLSSEDAVALAMRCEAAALDADKRIQNSEGAGVQTYHYQFVYGNTHGFLQHQRGT 177
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS S +A MQRD WY + L E IG AA+RT+ RL AK + T P
Sbjct: 178 RHSISCSVVAADESGMQRDYWYDTARSAAGLAGVESIGGTAAERTVRRLGAKSVPTGNYP 237
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+ +A L+ +SG SLYR+S+FL DSLGK+IFS I + E+PHI + S+
Sbjct: 238 VLFDTTIASSLIGHLVGGLSGGSLYRQSSFLTDSLGKQIFSDFINLREEPHIPQGWSSTY 297
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD +GV T+ R VV+ G++QGYFL++YSA+KLG++TT N+GGAH+LI+ +
Sbjct: 298 FDADGVATKPRFVVEQGMVQGYFLNSYSARKLGLQTTANAGGAHNLILAPTHADQA---- 353
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK+M TGLLVTELMG G+N +TGDYS+GA G+W+ENG I Y VEEITI+ +LQ+MF
Sbjct: 354 ALLKEMGTGLLVTELMGQGVNMLTGDYSRGAAGFWVENGVIAYPVEEITIASRLQDMFMN 413
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IV + D L R+S+ GS+L+E M +AG
Sbjct: 414 IVGVADDALRRSSHKVGSLLVEEMTVAG 441
>gi|345877214|ref|ZP_08828968.1| hypothetical protein Rifp1Sym_ap00190 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225763|gb|EGV52112.1| hypothetical protein Rifp1Sym_ap00190 [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 461
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/445 (42%), Positives = 279/445 (62%), Gaps = 8/445 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ + Q++L AK+ GAS + + G S+ VR G+ + IE D M V +Y
Sbjct: 25 QQRLEATVQEVLAEAKRQGASAAEAGVSSDAGLSLTVRLGEPETIEHTRDNGMGVTVYFG 84
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K G++STSD +L +T++AA N AR+T+ D GL D + + L P
Sbjct: 85 QRK----GSASTSDMSPAALRETVSAACNFARYTSKDECTGLADAELMASELPELDLCHP 140
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
W L ++ A IA CEN A + I N+E + +Q + NSHGF+ GY ++H +
Sbjct: 141 WELPVEQAIEIALACENAARQRDPRISNSEGASLDSQLGVQVYGNSHGFIGGYAGTRHSL 200
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S + + + EMQR+ WY+ D +LD P+ +G AA RT++RL A++I T++ VLF+
Sbjct: 201 SCAVVGEQDGEMQRNYWYTLARDATQLDSPQQVGETAADRTLARLGARRIPTQQAAVLFQ 260
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
A +A LL F I G++LYRK++FL+D L +++F +I+I E P + G SS+FDNE
Sbjct: 261 ADVAVGLLRSFIGAIRGSALYRKASFLLDHLDRQVFPENIRIHELPRLRGGLASSAFDNE 320
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV T++R V +GI++ Y L +Y+A+KLGM+TTGN+GG +L I S S + + +L+
Sbjct: 321 GVATRERDFVSDGILRSYVLDSYAARKLGMQTTGNAGGVRNLRISSG----SLDRQGLLQ 376
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
KM+TGLLVTELMG G+N +TGDYS+GA G+W+E G IQY VEEITI+G L+ MF ++ +
Sbjct: 377 KMDTGLLVTELMGQGVNTVTGDYSRGAAGFWVEGGVIQYPVEEITIAGNLREMFMGLLEV 436
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
G+DV TR S SGS LIE M+IAG+
Sbjct: 437 GTDVETRTSVQSGSWLIERMMIAGE 461
>gi|381159303|ref|ZP_09868536.1| putative Zn-dependent protease-like protein [Thiorhodovibrio sp.
970]
gi|380880661|gb|EIC22752.1| putative Zn-dependent protease-like protein [Thiorhodovibrio sp.
970]
Length = 462
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/441 (41%), Positives = 269/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+Q +D+L AK+ GAS + NG + VR G+++ +E D+ + + +Y G
Sbjct: 29 LRQTLEDLLAEAKRCGASAAEAAVTNSNGLEISVRLGEVETVEHTRDRGLGITVYF--GH 86
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G++STSDF +++ D + A N+AR T D AGL D + LD L PW L
Sbjct: 87 RT--GSASTSDFSPEAVRDAVQRACNLARHTQEDPCAGLADAALMASQVLDLDLNHPWAL 144
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
S+DDA +A CE+ A + IVN+E ++T + NSHGF+ GYP ++H +S +
Sbjct: 145 SVDDATALAIACEDAARATDPRIVNSEGASLSTHSGLKIYGNSHGFIGGYPSTRHGMSCA 204
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
+A + MQRD W++S +L +G AA+RT++RL +++ TRK PVLF A L
Sbjct: 205 VVASQDDSMQRDYWWTSARAANELQAATEVGREAARRTVARLGGRRLGTRKAPVLFRADL 264
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A LL A I+G +LYRKS+FL+D LGK+IF ++I E PH+ S+ FD +G+
Sbjct: 265 ASSLLRALAGAINGGNLYRKSSFLLDQLGKRIFPPWVEIFEQPHLPRGLASAPFDGDGLA 324
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
TQ + V G ++ Y L YSA +LG+ +T N+GG +L I T + K ML+++
Sbjct: 325 TQAKHFVSGGELKSYVLDHYSACRLGLTSTANAGGPRNLAI----TMGELDRKAMLRELG 380
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGL VTELMG G+N +TGDYS+GA G+W+ENG+IQ+ VEE+TI+G L+ MF+ +VA+G+D
Sbjct: 381 TGLFVTELMGQGVNMVTGDYSRGASGFWVENGEIQHPVEEVTIAGNLKTMFENLVAVGND 440
Query: 438 VLTRNSNTSGSILIENMIIAG 458
S +GS L+E M IAG
Sbjct: 441 CDYPGSTRTGSWLVERMTIAG 461
>gi|345864201|ref|ZP_08816405.1| protein PmbA [endosymbiont of Tevnia jerichonana (vent Tica)]
gi|345124732|gb|EGW54608.1| protein PmbA [endosymbiont of Tevnia jerichonana (vent Tica)]
Length = 444
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/445 (42%), Positives = 279/445 (62%), Gaps = 8/445 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ + Q++L AK+ GAS + + G S+ VR G+ + IE D M V +Y
Sbjct: 8 QQRLEATVQEVLAEAKRQGASAAEAGVSSDAGLSLTVRLGEPETIEHTRDNGMGVTVYFG 67
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K G++STSD +L +T++AA N AR+T+ D GL D + + L P
Sbjct: 68 QRK----GSASTSDMSPAALRETVSAACNFARYTSKDECTGLADAELMASELPELDLCHP 123
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
W L ++ A IA CEN A + I N+E + +Q + NSHGF+ GY ++H +
Sbjct: 124 WELPVEQAIEIALACENAARQRDPRISNSEGASLDSQLGVQVYGNSHGFIGGYAGTRHSL 183
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S + + + EMQR+ WY+ D +LD P+ +G AA RT++RL A++I T++ VLF+
Sbjct: 184 SCAVVGEQDGEMQRNYWYTLARDATQLDSPQQVGETAADRTLARLGARRIPTQQAAVLFQ 243
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
A +A LL F I G++LYRK++FL+D L +++F +I+I E P + G SS+FDNE
Sbjct: 244 ADVAVGLLRSFIGAIRGSALYRKASFLLDHLDRQVFPENIRIHELPRLRGGLASSAFDNE 303
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV T++R V +GI++ Y L +Y+A+KLGM+TTGN+GG +L I S S + + +L+
Sbjct: 304 GVATRERDFVSDGILRSYVLDSYAARKLGMQTTGNAGGVRNLRISSG----SLDRQGLLQ 359
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
KM+TGLLVTELMG G+N +TGDYS+GA G+W+E G IQY VEEITI+G L+ MF ++ +
Sbjct: 360 KMDTGLLVTELMGQGVNTVTGDYSRGAAGFWVEGGVIQYPVEEITIAGNLREMFMGLLEV 419
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
G+DV TR S SGS LIE M+IAG+
Sbjct: 420 GTDVETRTSVQSGSWLIERMMIAGE 444
>gi|119470398|ref|ZP_01613126.1| putative enzyme for maturation of Microcin B17 and degradation of
CcdA [Alteromonadales bacterium TW-7]
gi|119446323|gb|EAW27599.1| putative enzyme for maturation of Microcin B17 and degradation of
CcdA [Alteromonadales bacterium TW-7]
Length = 449
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/448 (41%), Positives = 281/448 (62%), Gaps = 9/448 (2%)
Query: 12 IYSK-SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
IYS+ S+ + ++L +AKK+GA+ + + +G SV R G+++ IE N D + +
Sbjct: 9 IYSQISQIKDAVAEVLEHAKKLGATAAEAAMSSTSGLSVSTRMGEVETIEFNQDGGLGIS 68
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ + K G++ST+D K+L + A +IA+FT+ D F G+ D+ LE NP D
Sbjct: 69 VYVGNNK----GSASTADLNPKTLRTVVEKAIDIAKFTSDDPFNGVADKELLEFNPQDLD 124
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW +S + + + E A N + IVN++ ++ Q + NSHG ++G+P +
Sbjct: 125 LYHPWDVSPEQGIELCHTAEQAALNADERIVNSDGASFSSHQGLRVYGNSHGLIAGFPRT 184
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS I G++MQRD+ Y+ D L +G AA T+++L ++K+ T K P
Sbjct: 185 RHSISTMVIGKDGEQMQRDSAYTVARDQAGLTDAAAVGLEAASETLAKLNSQKLGTMKVP 244
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F A +A L I G +LYRKS+FL+DSLG ++FS + I E PHIL SS
Sbjct: 245 VVFRADIANSLFGHLVSAIGGGALYRKSSFLLDSLGTQVFSHCVNIAERPHILKGLASSP 304
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGVKT R +++ G +Q Y L++Y+A+K+ M TG++GG H+ ++ ++ ++LK
Sbjct: 305 FDSEGVKTVDREIIQGGELQTYLLASYAARKMNMTPTGHAGGIHNWLV----EQTHNDLK 360
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK M TGLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MFK
Sbjct: 361 ALLKTMGTGLLVTELMGQGVNTVTGDYSRGAGGFWVENGEIQYPVSEITIAGNLKDMFKG 420
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I AIG D+ R +GS+LIE M IAG
Sbjct: 421 ISAIGGDIERRGGIQTGSVLIEQMQIAG 448
>gi|350559561|ref|ZP_08928401.1| peptidase U62 modulator of DNA gyrase [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349781829|gb|EGZ36112.1| peptidase U62 modulator of DNA gyrase [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 452
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/446 (39%), Positives = 275/446 (61%), Gaps = 6/446 (1%)
Query: 13 YSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIY 72
++ Q+ +L +A+ GAS + + + G SV VR+G+++ +E D+ M ++ Y
Sbjct: 12 HTAESLQERVARVLEHARACGASAAQVVVSHNVGLSVTVRRGEVETLEHERDQQMALVAY 71
Query: 73 IQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLY 132
K G++ST+DF +L +T AA IAR T D ++GLP+ + + D +L
Sbjct: 72 FGQAK----GSASTTDFSPGALRETAEAACRIARHTEPDPWSGLPEADAQARDWPDLELD 127
Query: 133 TPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKH 192
PW D A +A E F + + N+E V T+++ F L +S GFM GY ++H
Sbjct: 128 HPWDCPSDQAIELARSTEAAGFALDPRVDNSEGASVGTRRAMFWLGDSQGFMGGYCSTRH 187
Query: 193 IISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252
IS + +A MQRD Y+ D L + E +G AA+R + RL A+K++TR CPVL
Sbjct: 188 TISCALVARDAGGMQRDYEYTVARDAGDLAEAETVGRVAAERALRRLGARKLATRTCPVL 247
Query: 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFD 312
F +A L+ F R I G++ YR+S+FL+D+ G+++F +QI E P + G+ GS+ FD
Sbjct: 248 FVPEMARSLIGSFTRAIGGSAQYRRSSFLLDAAGQQVFPDWMQIDERPLLPGALGSAPFD 307
Query: 313 NEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEM 372
EGV+T++R +V G+++ Y L +YSA++LG++TTGN+GGA ++ + ++
Sbjct: 308 GEGVRTRERALVAGGVLESYILDSYSARRLGLQTTGNAGGARNVTV--RPYPGDRGFADL 365
Query: 373 LKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIV 432
L M TGLLVTEL+G G+N +TGDYS+GA G+W+ENG I Y VEEITI+G L++M+++I
Sbjct: 366 LADMGTGLLVTELIGQGVNQVTGDYSRGAAGFWVENGAIAYPVEEITIAGNLRDMYRRIA 425
Query: 433 AIGSDVLTRNSNTSGSILIENMIIAG 458
A+G+D R + +GS+LIE+M +AG
Sbjct: 426 AVGNDTDLRGNTRTGSVLIESMTVAG 451
>gi|50120208|ref|YP_049375.1| suppressor of the inhibitory activity of the carbon storage
regulator CsrA [Pectobacterium atrosepticum SCRI1043]
gi|49610734|emb|CAG74179.1| putative suppressor of the inhibitory activity of the carbon
storage regulator CsrA [Pectobacterium atrosepticum
SCRI1043]
Length = 454
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/442 (41%), Positives = 288/442 (65%), Gaps = 5/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q LA D+L++A GAS + + ++GN ++ VR G ID + QN ++V +Y G+
Sbjct: 18 LQSLAGDVLDFAAAKGASQAVVSISQGNRRTIRVRNGDIDTLTQNQSHFLSVTVYF--GQ 75
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G S++ F K++L D ++AA +A++ D +GLP+ + D L+ L
Sbjct: 76 RA--GTVSSTLFSKEALQDAVDAASTLAKYADEDPCSGLPEAQHFARDIYDLALHNADTL 133
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+++ A +A R E +A N +E++ +T+QQ F+LANS GF +GYP S H +
Sbjct: 134 TVEQALSLALRAE-QAANTTHEHGYSESSEITSQQGDFILANSAGFSAGYPTSLHTLWSH 192
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA + Q+ W+++ P L PE IG AA+R +++L A+K+STR+CPVLF+AP+
Sbjct: 193 AIAHNDTQRQQGFWHTTGRAPSLLASPEAIGHTAAQRAVAQLGARKLSTRRCPVLFDAPV 252
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L++ +SG +LYR ++FL LG+ I + H+ + E+P I G+ S+ FD EGV
Sbjct: 253 AHSLIHHLVGALSGAALYRSTSFLGQCLGETITAPHLSLYENPFIPGALASACFDAEGVA 312
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T R V+ +GI QGYFLS+YSA++LG+ TTG++GGA++L + S+++ + D+L +L++M+
Sbjct: 313 TAPRHVIHDGIAQGYFLSSYSARRLGLTTTGHAGGAYNLSVSSSQSHAGDDLPALLRQMH 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGLLVT L+G G+N +TGDYS+G G+W+ENG+IQY VEEITI+G L+ + VA+G+D
Sbjct: 373 TGLLVTTLLGHGLNPMTGDYSQGVAGFWVENGEIQYPVEEITIAGNLKTLLLHCVALGAD 432
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
+ T+ + + GS+LIE M IAG+
Sbjct: 433 IHTQGNLSCGSLLIEEMQIAGQ 454
>gi|407893327|ref|ZP_11152357.1| peptidase U62 modulator of DNA gyrase [Diplorickettsia massiliensis
20B]
Length = 453
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/460 (40%), Positives = 288/460 (62%), Gaps = 11/460 (2%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIE 60
M I + F K++++ L +++ AKK GA+ G++V VR +++ IE
Sbjct: 1 MPTPIPTSTTFPTKKADYESLLTEIIARAKKKGATQVEAGITHNLGYTVTVRGKEVETIE 60
Query: 61 QNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDEN 120
+ K + + +Y K G++++ DF + ++ + I A ++ARFTA D F+GL D
Sbjct: 61 HHRSKALGMTVYFDQRK----GSATSVDFSQSAIENLIANACHMARFTALDPFSGLADPA 116
Query: 121 TLEMNP-LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLAN 179
L P LY PW L+ A + CE +A + I+++E + T +S + AN
Sbjct: 117 LLAKPPYASLDLYHPWSLTPQQAIELGVECEAKALALDPRILHSEGVTIATDESFYFYAN 176
Query: 180 SHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRL 239
SH F+ YP S+H IS S +A MQRD Y+ P L + +AA+ T+ RL
Sbjct: 177 SHNFLGSYPTSRHSISCSLVAKDKGGMQRDGDYTVTRVPSALSSTTQLAAHAAQATVRRL 236
Query: 240 KAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIED 299
A++++T + PVLF + +A L++ F ISG +LYR ++FLV+ LGK IF+ I + E
Sbjct: 237 NARRLATCQVPVLFRSDVAHSLVSHFLGAISGGNLYRNASFLVNQLGKPIFAPSITLHEQ 296
Query: 300 PHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIII 359
PH+ GS+ FD+EGV TQ R +V G++QGY LS+YSA+KLG+++TGN+GGAH++I+
Sbjct: 297 PHLQQGLGSAPFDSEGVMTQNRTLVAKGVLQGYLLSSYSARKLGLQSTGNAGGAHNIIV- 355
Query: 360 SNKTKSSD-NLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEI 418
++SD +L ++KKM+ GL VTEL+G G N +TGDYS+GA G+W+ENG+IQY VEEI
Sbjct: 356 ----ETSDLDLTSLIKKMHRGLFVTELLGQGTNLVTGDYSRGAAGFWVENGEIQYPVEEI 411
Query: 419 TISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
TI+G L+ M++QIVA+G+D+ R+S +GSIL+ENM +AG
Sbjct: 412 TIAGNLKEMYQQIVAVGNDIDPRSSILTGSILVENMTVAG 451
>gi|392539909|ref|ZP_10287046.1| hypothetical protein Pmarm_17457 [Pseudoalteromonas marina mano4]
Length = 449
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/448 (41%), Positives = 281/448 (62%), Gaps = 9/448 (2%)
Query: 12 IYSK-SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
IYS+ S+ + ++L +AKK+GA+ + + +G SV R G+++ IE N D + +
Sbjct: 9 IYSQISQIKDAVAEVLEHAKKLGATAAEAAMSSTSGLSVSTRMGEVETIEFNQDGGLGIS 68
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ + K G++ST+D K+L + A +IA+FT+ D F G+ D+ LE NP D
Sbjct: 69 VYVGNNK----GSASTADLNPKTLRTVVEKAIDIAKFTSDDPFNGVADKELLEFNPQDLD 124
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW +S + + + E A N + IVN++ ++ Q + NSHG ++G+P +
Sbjct: 125 LYHPWDVSPEQGIELCHTAEQAALNADERIVNSDGASFSSHQGLRVYGNSHGLIAGFPRT 184
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS I G++MQRD+ Y+ D L +G AA T+++L ++K+ T K P
Sbjct: 185 RHSISTMVIGKDGEQMQRDSAYTVARDQAGLTDAAAVGLEAASETLAKLNSQKLGTMKVP 244
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F A +A L I G +LYRKS+FL+DSLG ++FS + I E PHIL SS
Sbjct: 245 VIFRADIANSLFGHLVSAIGGGALYRKSSFLLDSLGTQVFSHCVNIAERPHILKGLASSP 304
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGVKT R +++ G +Q Y L++Y+A+K+ M TG++GG H+ ++ ++ ++L+
Sbjct: 305 FDSEGVKTVDREIIQGGELQTYLLASYAARKMNMTPTGHAGGIHNWLV----EQTHNDLQ 360
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK M TGLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MFK
Sbjct: 361 ALLKTMGTGLLVTELMGQGVNTVTGDYSRGAGGFWVENGEIQYPVSEITIAGNLKDMFKG 420
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I AIG D+ R +GS+LIE M IAG
Sbjct: 421 ISAIGGDIERRGGIQTGSVLIEQMQIAG 448
>gi|359451853|ref|ZP_09241231.1| PmbA protein [Pseudoalteromonas sp. BSi20480]
gi|358042311|dbj|GAA77480.1| PmbA protein [Pseudoalteromonas sp. BSi20480]
Length = 449
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/448 (41%), Positives = 281/448 (62%), Gaps = 9/448 (2%)
Query: 12 IYSK-SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
IYS+ S+ + ++L +AKK+GA+ + + +G SV R G+++ IE N D + +
Sbjct: 9 IYSQISQVKDAVAEVLEHAKKLGATAAEAAMSSTSGLSVSTRMGEVETIEFNQDGGLGIS 68
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ + K G++ST+D K+L + A +IA+FT+ D F G+ D+ LE NP D
Sbjct: 69 VYVGNNK----GSASTADLNPKTLRTVVEKAIDIAKFTSDDPFNGVADKELLEFNPQDLD 124
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW +S + + + E A N + IVN++ ++ Q + NSHG ++G+P +
Sbjct: 125 LYHPWDVSPEQGIELCHTAEQAALNADERIVNSDGASFSSHQGLRVYGNSHGLIAGFPRT 184
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS I G++MQRD+ Y+ D L +G AA T+++L ++K+ T K P
Sbjct: 185 RHSISTMVIGKDGEQMQRDSAYTVARDQAGLTDAAAVGLEAASETLAKLNSQKLGTMKVP 244
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F A +A L I G +LYRKS+FL+DSLG ++FS + I E PHIL SS
Sbjct: 245 VVFRADIANSLFGHLVSAIGGGALYRKSSFLLDSLGTQVFSHCVNIAERPHILKGLASSP 304
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGVKT R +++ G +Q Y L++Y+A+K+ M TG++GG H+ ++ ++ ++L+
Sbjct: 305 FDSEGVKTVDREIIQGGELQTYLLASYAARKMNMTPTGHAGGIHNWLV----EQTHNDLQ 360
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK M TGLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MFK
Sbjct: 361 ALLKTMGTGLLVTELMGQGVNTVTGDYSRGAGGFWVENGEIQYPVSEITIAGNLKDMFKG 420
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I AIG D+ R +GS+LIE M IAG
Sbjct: 421 ISAIGGDIERRGGIQTGSVLIEQMQIAG 448
>gi|404378511|ref|ZP_10983602.1| hypothetical protein HMPREF9021_00590 [Simonsiella muelleri ATCC
29453]
gi|294483638|gb|EFG31322.1| hypothetical protein HMPREF9021_00590 [Simonsiella muelleri ATCC
29453]
Length = 442
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/448 (41%), Positives = 284/448 (63%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +S + + LA L A++ GA+ + + +E G V +R +ID IE DK+++V
Sbjct: 2 FQHSADDLRLLAAQTLQLAREKGATAAETDISESLGQGVQIRLQEIDQIEFQQDKSLDVT 61
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ K G +ST+DF +++L +T+ AA +IAR+TA D FAGL D + + + D
Sbjct: 62 VYVGQRK----GRASTADFSERALRETVQAAVDIARYTAEDEFAGLADVHLMATHCPDLD 117
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y W LS + A +A CE ++ I N++ GV T ++ AN+H F+ +
Sbjct: 118 KYHEWALSTEAAIELAKNCEQAGLASDARIQNSDGAGVQTSHFQYVYANTHDFLQHQCGT 177
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS S +A + M+RD WY + D K+L+ E IG AA+R + RL A+ + T P
Sbjct: 178 RHAISCSLVASDAQGMERDYWYDVSCDFKQLESAESIGQRAAERVVRRLGARSVPTGSYP 237
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
++F+A ++ L+N +SG +LYR+++FL++SLGK+I + + E+PH+ + GS+
Sbjct: 238 IVFDATVSGSLINHVVGGLSGGALYRENSFLLNSLGKQILPDFVNLREEPHLAHTLGSTY 297
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV TQ R V++ G++QGYFLS+YSA+KLGM+TT N+GGAH+L + N T S
Sbjct: 298 FDGEGVATQPRFVIEKGMVQGYFLSSYSARKLGMQTTANAGGAHNLFL--NHTHESQ--A 353
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
++L+ M TGLL+TELMG G+N +TGDYS+GA G+W+ENG + Y V EITI+G+LQ+M
Sbjct: 354 DLLRDMGTGLLITELMGQGVNMLTGDYSRGAAGFWVENGVVAYPVSEITIAGRLQDMLFN 413
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I I +D L RN++ GSI ++ M +AG
Sbjct: 414 IKGISNDALCRNASKIGSIWVDEMTVAG 441
>gi|384086419|ref|ZP_09997594.1| pmbA protein, partial [Acidithiobacillus thiooxidans ATCC 19377]
Length = 428
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/429 (45%), Positives = 270/429 (62%), Gaps = 11/429 (2%)
Query: 33 GASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKK 92
G + + + G G SV VR G+++ IE N DK M V +Y+ K G++STSDF +K
Sbjct: 9 GGTAAEAAASTGKGLSVTVRLGEVESIEYNQDKGMGVTVYLGQSK----GSASTSDFSRK 64
Query: 93 SLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENE 152
++ +T+ AA IAR T++D F+GL D D LY PW + D A +A RCE
Sbjct: 65 AIAETVEAALTIARHTSADPFSGLADPELFAREFPDLNLYHPWSIDADLAAELARRCEAA 124
Query: 153 AFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIA--IKGKEMQRDN 210
A + + I N+E + T + + ANS GF+ S+H +S S IA +KG MQRD
Sbjct: 125 ARDSDPRIHNSEGGSLGTSEGLSVYANSLGFVGKRQSSQHSLSCSVIAEDLKGG-MQRDY 183
Query: 211 WYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLIS 270
WY + L PE IG AA+R + RL A+K+ T + PV+FE +A +L A IS
Sbjct: 184 WYDVARNASALASPESIGKIAAERAVRRLDARKLPTTRAPVIFENQVASSILGHLASAIS 243
Query: 271 GNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQ 330
G SLYRKS+FL+DSLGK +F HI+I E+P GS+SFD+EGV T R ++ GI+Q
Sbjct: 244 GGSLYRKSSFLLDSLGKTLFPEHIRIYEEPLRPKGLGSASFDSEGVATCNRDIISEGILQ 303
Query: 331 GYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGI 390
GY L +YS +KL M TTGN+GG H+L + S +L+EM+++M GLLVTEL+G GI
Sbjct: 304 GYILDSYSGRKLQMPTTGNAGGVHNLTL----EPGSRSLQEMIREMGRGLLVTELIGFGI 359
Query: 391 NYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSIL 450
N +TGDYS+GA G+WIENG+IQY VEEITI+G LQ MFK + +G+D+L + SIL
Sbjct: 360 NMVTGDYSRGAAGFWIENGEIQYPVEEITIAGSLQAMFKGMQMVGNDLLIHGNTGCSSIL 419
Query: 451 IENMIIAGK 459
I+ M+IAG+
Sbjct: 420 IDEMMIAGE 428
>gi|227114379|ref|ZP_03828035.1| putative suppressor of the inhibitory activity of the carbon
storage regulator CsrA [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 454
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/442 (40%), Positives = 287/442 (64%), Gaps = 5/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q LA D+L++A GAS + + ++GN ++ VR G ID + QN + ++V +Y G+
Sbjct: 18 LQSLAGDVLDFAATKGASQAVVSISQGNRRTIRVRNGDIDTLTQNQSRFLSVTVYF--GQ 75
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G S++ F K++L D ++AA +A++ D +GLP+ D L+ L
Sbjct: 76 RA--GTVSSTLFSKEALQDAVDAASTLAKYADEDPCSGLPEAQHFAREIYDLALHNADTL 133
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+++ A +A R E +A N +E+T +T+QQ F+LANS GF +GYP S H +
Sbjct: 134 TVEQALSLALRAE-QAANTTHEHGYSESTEITSQQGDFILANSAGFSAGYPTSLHTLWSH 192
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA + Q+ W+++ P L PE IG AA+R +++L A+K+STR+CPVLF+AP+
Sbjct: 193 AIARNDTQRQQGFWHTTGRAPSLLASPEAIGHTAAQRAVAQLGAQKLSTRRCPVLFDAPV 252
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
L++ +SG +LYR ++FL LG+ I + H+ + E+P I G+ S+ FD EGV
Sbjct: 253 THSLIHHLVGALSGAALYRSTSFLGQCLGETITAPHLSLYENPFIPGALASACFDAEGVA 312
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
R V+ +GI QGYFLS+YSA++LG+ TTG++GGA++L + S+++++ D+L +L++M+
Sbjct: 313 AAPRHVIHDGIAQGYFLSSYSARRLGLTTTGHAGGAYNLTVSSSQSRNDDDLPALLRQMH 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGLLVT L+G G+N +TGDYS+G G+W+ENG+IQY VEEITI+G L+ + VA+G+D
Sbjct: 373 TGLLVTTLLGHGLNPMTGDYSQGVAGFWVENGEIQYPVEEITIAGNLKTLLLHCVALGAD 432
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
+ T+ + + GS+LIE M IAG+
Sbjct: 433 IHTQGNLSCGSLLIEEMQIAGQ 454
>gi|121998912|ref|YP_001003699.1| C69 family peptidase [Halorhodospira halophila SL1]
gi|121590317|gb|ABM62897.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Halorhodospira halophila SL1]
Length = 448
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/442 (39%), Positives = 276/442 (62%), Gaps = 7/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+ L Q L+ A++ GA + + G SV VRKG+ID +E + ++M V +Y G+
Sbjct: 14 LEDLVQQALDEARQHGADAAEAACSGDVGLSVNVRKGEIDTLEHHRGRDMGVTVYF-GGR 72
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
K G++S + ++++ D + AA +IAR+T+ D GL + ++P D L PW L
Sbjct: 73 K---GSASAGELSEQAVRDAVQAACDIARYTSEDPANGLAPAERMAVHPPDLDLDHPWPL 129
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ DDA +A CE+ A + I N E GV+ + NSHGF S P S+H I
Sbjct: 130 AADDAVELARDCESAAVEADPRIENTEGAGVSIHRGLHAYGNSHGFFSVLPESRHSIHCV 189
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
+A +G+ MQRD WY+ DP L+ +G AA+ ++RL A+ +ST + PVLF AP+
Sbjct: 190 AVAGRGEAMQRDYWYTVARDPAALEDARSVGRQAAEHAVARLGAESLSTERVPVLFRAPV 249
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ + G++LYR+++FLVDS G+++F + +Q++E PHI + GS++FD EGV
Sbjct: 250 ARGLVGHLVSAVRGSALYRQASFLVDSAGEQLFPAWLQMVERPHIRQALGSTAFDAEGVA 309
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T +V++G++Q Y L +YSA++LG++TT N+GG H+L + + ++ + ++++M
Sbjct: 310 TADSALVQDGVLQRYVLDSYSARRLGLETTANAGGVHNLEV---SGGAGEDFEGLIRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GL+VTELMG G+N +TGDYS+GA G+W+ENG I V+EITI+G L+++F I +GSD
Sbjct: 367 RGLVVTELMGQGVNLVTGDYSRGAAGFWVENGVIDRPVQEITIAGHLRDLFAGIQVVGSD 426
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
V R + GSIL+E M +AG+
Sbjct: 427 VDRRGNIRCGSILVEEMTVAGQ 448
>gi|406915398|gb|EKD54485.1| hypothetical protein ACD_60C00079G0038 [uncultured bacterium]
Length = 444
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/448 (42%), Positives = 286/448 (63%), Gaps = 9/448 (2%)
Query: 12 IYSKSEF-QQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
+++ E+ + +A D+L AKK GAS + ++ + GFSV R G ++ +E + DK +++
Sbjct: 4 VWNNPEYLKNIAADILKEAKKRGASAAEVDVSAQKGFSVTARMGDVESVEYHQDKTVDIT 63
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y G++ G+SS SD ++ + AA +IARFT D L D++ L D +
Sbjct: 64 VYF--GERT--GSSSLSDLRLDAINAAVEAACHIARFTDKDPCTRLADKDLLAFQYPDLQ 119
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
L +PW +++ +A +A CE +A + I N+E V+T + + NS GF+ Y +
Sbjct: 120 LCSPWHITVPEAIELALACEKKALAKDPRIQNSEGAEVSTTEGCHVYGNSQGFIGLYAAT 179
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS IA + EMQRD Y+ +SDP L+ + + AAK+T+ RL AK+++TR+ P
Sbjct: 180 RHDISCVLIAKQKDEMQRDYSYTVSSDPALLESIDWVAADAAKKTVRRLGAKQLTTRRVP 239
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F A A LL F ISG++LYRKS+FL+D L ++F HI+I E PH+L S GS+
Sbjct: 240 VIFAAEEARTLLGHFVAAISGSNLYRKSSFLLDQLNTRVFPEHIRIEEKPHLLKSLGSAP 299
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+ GV T + V G++Q Y L YSA KLGM+TTGN+GG H+L I + S +L
Sbjct: 300 FDDNGVATCPNVFVDQGVLQKYALGIYSACKLGMQTTGNAGGVHNLCI----SAGSKDLT 355
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK M TGLL+T+LMG G+N +TGDYS+GA G+W+E G IQY VEEITI+G L++M+ +
Sbjct: 356 SLLKTMGTGLLITDLMGHGVNLLTGDYSRGATGFWVEGGNIQYPVEEITIAGNLRDMYAK 415
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I+ +GSD+ R + +GSILIENM++AG
Sbjct: 416 ILEVGSDIDKRGNIQTGSILIENMMVAG 443
>gi|350551398|ref|ZP_08920613.1| peptidase U62 modulator of DNA gyrase [Thiorhodospira sibirica ATCC
700588]
gi|349797008|gb|EGZ50786.1| peptidase U62 modulator of DNA gyrase [Thiorhodospira sibirica ATCC
700588]
Length = 447
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/446 (41%), Positives = 279/446 (62%), Gaps = 8/446 (1%)
Query: 14 SKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYI 73
+K L + +L+ A+ GA+ + + G SV VR G+++ +E + D+ + V +Y+
Sbjct: 10 TKDALHALVEQVLHEARLAGATAAEAAVSCNTGLSVNVRLGEVETLEYHQDQGVGVTVYL 69
Query: 74 QDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYT 133
K G++STSD +L +T+ AA IAR+TA+D +AGL D + D L
Sbjct: 70 GQSK----GSASTSDLSPAALKETVAAACRIARYTANDPYAGLADAALMAYTYPDLDLDH 125
Query: 134 PWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHI 193
PW LS ++A +A CE+ A + ++ I N+E GV + + + NSHGF+ GY ++H
Sbjct: 126 PWSLSAEEAIALARACEDHARSVDARITNSEGAGVDSFRGTAVYGNSHGFIGGYTSTRHA 185
Query: 194 ISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLF 253
+S + IA + ++MQRD WYS + L IG AA+R +SRL A+++STR+CPVLF
Sbjct: 186 LSCTVIAQQDEDMQRDYWYSVARQAEGLASAHEIGSKAAQRALSRLGARQLSTRQCPVLF 245
Query: 254 EAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDN 313
+A L+ F + G SLYRK++FL+DSLG ++F + ++I E PHI + GS+ FD
Sbjct: 246 SPEVARSLIGHFIGAVRGGSLYRKASFLLDSLGTQVFPAQVRIHEAPHIPMALGSAPFDG 305
Query: 314 EGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEML 373
EGV R +V++G++QGY LS YSA++L M+TTGN+GG +L I + +L
Sbjct: 306 EGVAITARDLVRDGVVQGYVLSAYSARRLNMQTTGNAGGVRNLSIDPTHLDQA----SLL 361
Query: 374 KKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVA 433
+M TGLLVTEL+G G+N +TGDYS+GA G+W+ENG I Y V EITI+G L+ MF +V
Sbjct: 362 AEMGTGLLVTELIGQGVNSVTGDYSRGASGFWVENGVIAYPVHEITIAGNLREMFMHLVG 421
Query: 434 IGSDVLTRNSNTSGSILIENMIIAGK 459
IG D+ R + +GS+L+E M +AG+
Sbjct: 422 IGGDIDPRGNIRTGSLLLERMTLAGE 447
>gi|354598575|ref|ZP_09016592.1| peptidase U62 modulator of DNA gyrase [Brenneria sp. EniD312]
gi|353676510|gb|EHD22543.1| peptidase U62 modulator of DNA gyrase [Brenneria sp. EniD312]
Length = 456
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/439 (40%), Positives = 280/439 (63%), Gaps = 4/439 (0%)
Query: 21 LAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMF 80
+A+ L+ A GA SS+ ++G+ ++ VR G +D + QN+ + ++V +Y G++
Sbjct: 22 VAEQALSLAAAKGAGQSSVNVSQGDRRNIRVRNGDLDTLTQNHSQFLSVTVYF--GQRS- 78
Query: 81 YGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSID 140
G + + F ++L + + +A +A++ D + GLPD+ L + D KLY P L+++
Sbjct: 79 -GTVTATQFTSEALQEAVESACMLAKYGDEDPYGGLPDQQRLATDIRDLKLYEPESLTVE 137
Query: 141 DAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIA 200
A +A R E A + +E+T + +QQS F+LANS GF +GYP S H + +A
Sbjct: 138 QALALALRAEKAADDAQPGRCYSESTEIASQQSEFILANSVGFCAGYPSSFHSLWNQSLA 197
Query: 201 IKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFE 260
+ ++ W + P +L PEIIG AA R +++L A+K+STR+CPVLFEAP+A
Sbjct: 198 RDDTQRRQGYWGMTRRSPAQLGHPEIIGATAAGRALAQLGAQKLSTRRCPVLFEAPVAHS 257
Query: 261 LLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQK 320
L++ +SG +LYR S+FL LG+ I + H+ + EDP I S+ FD+EGV
Sbjct: 258 LIHHLVNALSGGALYRASSFLGPCLGESIIAPHLSLHEDPFIPTGLASACFDSEGVAAST 317
Query: 321 RLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGL 380
R ++ G+ +GYFLS+YSA++LG+ TTGN+GGA++L + S++ + D+L + +K++ GL
Sbjct: 318 RPIIHQGLAKGYFLSSYSARRLGLVTTGNAGGAYNLTVNSSQNQPGDDLPALRRKLHNGL 377
Query: 381 LVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLT 440
LVT L+G G+N ITGDYS+G G+W+ENG+IQY VEEITI+G L+ M +Q VA+G+D T
Sbjct: 378 LVTTLLGQGLNPITGDYSQGVSGFWVENGEIQYPVEEITIAGNLKTMLRQCVALGADAHT 437
Query: 441 RNSNTSGSILIENMIIAGK 459
+ T GS+LIE M +AG+
Sbjct: 438 QGQLTCGSMLIEEMQVAGR 456
>gi|90407769|ref|ZP_01215947.1| Predicted inactivated Zn-dependent protease [Psychromonas sp.
CNPT3]
gi|90311129|gb|EAS39236.1| Predicted inactivated Zn-dependent protease [Psychromonas sp.
CNPT3]
Length = 442
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/448 (43%), Positives = 281/448 (62%), Gaps = 7/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
I K + + QD L AKK+GA + + + +G SV R G+++ IE N D M +
Sbjct: 1 MIEQKKQLENAVQDALMIAKKLGADQAEVALGKSSGISVNTRLGEVENIEFNLDGAMGIS 60
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+Q+ K G++ST+D ++++ T+ AA +IA++T+ D FAGL D + LE + LD
Sbjct: 61 VYVQNCK----GSASTADLSPEAIHATVKAAIDIAKYTSKDTFAGLLDTDCLERSVLDLD 116
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY P L+ D+ +A CE A N + LIVN++ V + S + NS+ F+ Y S
Sbjct: 117 LYHPSALNTDELLALAKECEEFALNSDPLIVNSDGAAVNSHSSLRVYGNSNDFLESYASS 176
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H +S IA KG+EMQRD+ Y+S D + L + + A KR++ RL A KI T++
Sbjct: 177 RHSLSCVLIAQKGEEMQRDHSYTSARDMRDLYSAQWVANDAVKRSVERLGAVKIKTQETA 236
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F +A L F ISG +LYRKSTFL+DSL +KIF + I E PHI+ SS
Sbjct: 237 VIFSPEVATSLFGHFVGAISGMNLYRKSTFLLDSLNQKIFPDWMNIEEKPHIIKGIASSP 296
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EG KT+ L+V++G++Q Y L+ Y+A+KL M++TG+SGG H+ + SN +L
Sbjct: 297 FDQEGGKTKDALIVQDGVLQTYLLTGYAARKLKMQSTGHSGGIHNWFVKSN---CDLDLA 353
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+ K+M GL VTELMG G+N +TGDYS+GA G+WIENG I Y V EITI+GKLQ+MF
Sbjct: 354 GLFKEMGNGLFVTELMGQGVNMVTGDYSRGAAGFWIENGVIAYPVHEITIAGKLQDMFMD 413
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
+ AIGSDV R+S +GSILI M +AG
Sbjct: 414 MQAIGSDVDPRSSLKTGSILISKMKVAG 441
>gi|406980050|gb|EKE01717.1| hypothetical protein ACD_21C00067G0001 [uncultured bacterium]
Length = 454
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 186/447 (41%), Positives = 289/447 (64%), Gaps = 10/447 (2%)
Query: 13 YSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIY 72
+ ++ F+ L D++N AKK GA+ ++ + +GFS+ VRK K++ IE +N K + V +Y
Sbjct: 16 FDETRFRDLTNDVINQAKKHGATAVEVDADISSGFSINVRKNKVETIEHSNGKTLGVTVY 75
Query: 73 IQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLY 132
G + G+++ SD +S++ + A +IARFT D F GL D + + D +Y
Sbjct: 76 F--GYRT--GSATASDLTPQSVHTMVEKACHIARFTNEDPFVGLADPELMAYDYHDLDIY 131
Query: 133 TPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKH 192
PW ++I++A + ENE F ++ + N+E ++T ++ + ANSHGF +KH
Sbjct: 132 HPWQINIEEAIALTKNAENEGFAYDKRLTNSEGASLSTFKAFDIYANSHGFCGTTASTKH 191
Query: 193 IISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252
+ S IA +MQRD +Y+ D L+ + AAKRT++RL A++I+TRKCP++
Sbjct: 192 SFACSFIAEHKNDMQRDYYYTVAHDACDLENANHVARKAAKRTVNRLNAQRITTRKCPII 251
Query: 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFD 312
F A +A L+ F I G ++YRKS+FL++ L K +F+ HI I E+PH+ + GS++FD
Sbjct: 252 FAAEIAGSLIGNFIGAIHGGNIYRKSSFLLNHLHKPVFAKHINIEENPHLPKALGSAAFD 311
Query: 313 NEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD-NLKE 371
EGVK + +V +G++Q Y L +YSA+KL MKTTGN+GG H++I+ K+SD +L
Sbjct: 312 GEGVKLSRNNIVVDGVLQRYVLDSYSARKLKMKTTGNAGGVHNVIL-----KTSDLDLNG 366
Query: 372 MLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQI 431
+L+KM TGLLVTELMGDG+N +TGDYS+G FGYWIENG++QY V TI+ L++M +
Sbjct: 367 LLRKMGTGLLVTELMGDGVNIVTGDYSRGVFGYWIENGRVQYPVIGATIASNLKDMLLNV 426
Query: 432 VAIGSDVLTRNSNTSGSILIENMIIAG 458
V +G+DV R++ +GSIL++ M +AG
Sbjct: 427 VDVGNDVDHRSNILTGSILLDKMTVAG 453
>gi|392549048|ref|ZP_10296185.1| hypothetical protein PrubA2_21967 [Pseudoalteromonas rubra ATCC
29570]
Length = 448
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 177/443 (39%), Positives = 277/443 (62%), Gaps = 8/443 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E +Q D+L+YAK++GA+ + + +G SV R G+++ IE N D + + +Y+
Sbjct: 14 EVKQAVSDVLDYAKQLGATSAEASMSRTSGLSVSTRMGEVETIEFNQDGGLGLSVYVGQH 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++ST+D ++L + A IA+FT+ D G+ D + D L+ PW
Sbjct: 74 K----GSASTADLGPEALRSVVEKAVEIAKFTSDDPCNGVADAELMPEVVPDLDLFHPWS 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
L+ ++ E A N++ IVN++ V + Q + NSHGF++G+P ++H +S
Sbjct: 130 LTPEEGVKRCLEAEQAALNYDERIVNSDGASVASHQGLRVYGNSHGFLAGFPRTRHTLST 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
I + MQRDN YS +L + +G AA+ T+++L ++K+ T + PV+F A
Sbjct: 190 MVIGEENGVMQRDNAYSITRVHSQLRDAKAVGIEAAESTLAKLNSRKLETMRVPVVFRAD 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
+A L I G +LYRKS+FL+DSLG +FSS + I E PH+L + SS FD EGV
Sbjct: 250 IANSLFGHLVSAIGGGALYRKSSFLLDSLGTDVFSSCVSIKEQPHLLQALASSPFDAEGV 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
+T +R ++K G+++ Y L +Y+A++LGM++TG++GG H+ ++ + + +L +L+ M
Sbjct: 310 QTTERDIIKGGVLETYLLPSYAARRLGMRSTGHAGGIHNWLVQATEP----DLAALLRTM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MFK I AIG
Sbjct: 366 GRGLLVTELMGQGVNTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFKSIQAIGG 425
Query: 437 DVLTRNSNTSGSILIENMIIAGK 459
D+ TR + +GS+LIENM IAG+
Sbjct: 426 DIETRGAVQTGSVLIENMQIAGQ 448
>gi|409201257|ref|ZP_11229460.1| hypothetical protein PflaJ_07940 [Pseudoalteromonas flavipulchra
JG1]
Length = 449
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 176/436 (40%), Positives = 280/436 (64%), Gaps = 8/436 (1%)
Query: 24 DMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGN 83
D+L +AKK+GA+ + + +G SV R G+++ IE N D + + +Y+ + K G+
Sbjct: 22 DVLAHAKKLGATSAEAAMSSTSGLSVSTRMGEVETIEFNQDGGLGISVYVGNHK----GS 77
Query: 84 SSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAK 143
+ST+D ++L + A +IARFT+ D G+ D+ LEM+P D L+ PW +S D+A
Sbjct: 78 ASTADLSPEALRSVVEKAVDIARFTSDDPCNGVADKALLEMSPADLDLFHPWQVSPDEAI 137
Query: 144 LIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKG 203
E A F+ IVN++ +++ Q + NSHG ++G+P ++H +S I +G
Sbjct: 138 EQCITAEKAALAFDPRIVNSDGASLSSHQGIRVYGNSHGLIAGFPRTRHSLSTMVIGKEG 197
Query: 204 KEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLN 263
++MQRD+ Y+ + +L PE +G AA+ T+++L ++K+STRK PV+F A +A L
Sbjct: 198 EQMQRDSAYALSRVHTELKSPEEVGLEAAQSTLAKLGSRKVSTRKVPVIFRADIANSLFG 257
Query: 264 IFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLV 323
I G +LYRKS+FL+DSL +IF+ + I E PH+L SS FD+EGVKT R +
Sbjct: 258 HLVSGIGGGALYRKSSFLLDSLDTQIFNRCVNIEEKPHLLRGLASSPFDSEGVKTIDREI 317
Query: 324 VKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVT 383
+ +G++ Y L++Y+A+++ M+ TG++GG H+ ++ + D+L +L M TGLLVT
Sbjct: 318 ITDGVLNTYLLASYAARRMNMQATGHAGGIHNWLV----KPTHDDLTSLLASMGTGLLVT 373
Query: 384 ELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNS 443
ELMG G+N +TGDYS+GA G+W+ENG++QY V EITI+G L++MF I +G+D+ R +
Sbjct: 374 ELMGQGVNTVTGDYSRGAAGFWVENGELQYPVSEITIAGNLKDMFMGIEGVGADIECRGA 433
Query: 444 NTSGSILIENMIIAGK 459
+GSIL+ NM IAG+
Sbjct: 434 VQTGSILLNNMQIAGE 449
>gi|325266025|ref|ZP_08132711.1| U62 family microcin-processing peptidase [Kingella denitrificans
ATCC 33394]
gi|324982663|gb|EGC18289.1| U62 family microcin-processing peptidase [Kingella denitrificans
ATCC 33394]
Length = 449
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 182/455 (40%), Positives = 281/455 (61%), Gaps = 8/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K ++ F ++ ++F AQ +L A++ GA + ++ +E G SV VR +I+ IE D
Sbjct: 1 MKVKNMFQHTSTQFIDTAQSVLALARQKGAGSAEVDVSESLGQSVSVRLQEIEQIEHQQD 60
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
K++++ +Y K G +ST+D ++L T+ AA +IAR+TA D +AGL D + +
Sbjct: 61 KSLDITVYFGQRK----GRASTADLSPQALEATVQAACDIARYTAEDEYAGLADADLMAN 116
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
D Y W LS ++A +A +CE + IVN++ ++ F+ AN+HGF
Sbjct: 117 TVGDLDKYHEWNLSSEEAVALAKQCEQAGLEADGRIVNSDGANLSISHYQFVYANTHGFC 176
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
++H IS S +A G M+RD W+ P+ L+ E IG A++R + RL A+ +
Sbjct: 177 QHQKGTRHSISCSLVADGGDGMERDYWFDVACRPQDLESAEHIGRTASQRAVRRLNARSL 236
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
T + PV+F+ +A L+ +SG SLYR+++FL DSLGK I +H+ + E+PHI
Sbjct: 237 PTGQYPVVFDTTIAGSLIGHLIGGLSGPSLYRQASFLCDSLGKTILPTHLDLREEPHIPR 296
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
SS FD EGV T+ R V++ G++QGYFL++Y+A+KLGM++T N+GGAHHLI+ T
Sbjct: 297 GLNSSYFDAEGVATRARSVIEKGVVQGYFLNSYAARKLGMQSTANAGGAHHLIL----TH 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ D +LK M +GLLVTELMG G+N +TGDYS+GA G+W+ENG I + V ITI+ L
Sbjct: 353 THDTQAALLKDMGSGLLVTELMGQGVNILTGDYSRGAAGFWVENGVISHPVSGITIADNL 412
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M I + +DVL R+S+ GSI +E M +AG+
Sbjct: 413 RDMLCNIAGVANDVLYRSSHHIGSIWLEKMTVAGE 447
>gi|392543341|ref|ZP_10290478.1| hypothetical protein PpisJ2_16182 [Pseudoalteromonas piscicida JCM
20779]
Length = 449
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 176/436 (40%), Positives = 278/436 (63%), Gaps = 8/436 (1%)
Query: 24 DMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGN 83
D+L +AKK+GA+ + + +G SV R G+++ IE N D + + +Y+ + K G+
Sbjct: 22 DVLAHAKKLGATSAEAAMSSTSGLSVSTRMGEVETIEFNQDGGLGISVYVGNHK----GS 77
Query: 84 SSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAK 143
+ST+D ++L + A +IARFT+ D G+ D+ LEM+P D L+ PW +S D+A
Sbjct: 78 ASTADLSPEALRSVVEKAIDIARFTSDDPCNGVADKALLEMSPTDLDLFHPWQVSPDEAI 137
Query: 144 LIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKG 203
E A F+ IVN++ +++ Q + NSHG ++G+P ++H +S I +G
Sbjct: 138 EQCIAAEKAALEFDPRIVNSDGASLSSHQGIRVYGNSHGLIAGFPRTRHSLSTMVIGKEG 197
Query: 204 KEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLN 263
++MQRD+ Y+ + +L PE +G AA+ T+++L ++K+STRK PV+F A +A L
Sbjct: 198 EQMQRDSAYTLSRVHSELKSPEEVGLEAAQSTLAKLGSRKVSTRKVPVIFRADIANSLFG 257
Query: 264 IFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLV 323
I G +LYRKS+FL+DSL +IF+ + I E PH+L SS FD+EGVKT R +
Sbjct: 258 HLVSGIGGGALYRKSSFLLDSLDTQIFNRCVNIEEKPHLLRGLASSPFDSEGVKTIDREI 317
Query: 324 VKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVT 383
+ +G++ Y L++Y+A+++ M+ TG++GG H+ ++ + D+L +L M TGLLVT
Sbjct: 318 ITDGVLNTYLLASYAARRMNMQATGHAGGIHNWLV----KPTHDDLTSLLASMGTGLLVT 373
Query: 384 ELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNS 443
ELMG G+N +TGDYS+GA G+W+ENG++QY V EITI+G L++MF I IG D+ R +
Sbjct: 374 ELMGQGVNTVTGDYSRGAAGFWVENGELQYPVSEITIAGNLKDMFMGIEGIGGDIECRGA 433
Query: 444 NTSGSILIENMIIAGK 459
+GSIL+ M IAG+
Sbjct: 434 VQTGSILLNTMQIAGE 449
>gi|359439298|ref|ZP_09229274.1| PmbA protein [Pseudoalteromonas sp. BSi20311]
gi|358025968|dbj|GAA65523.1| PmbA protein [Pseudoalteromonas sp. BSi20311]
Length = 449
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 181/448 (40%), Positives = 278/448 (62%), Gaps = 9/448 (2%)
Query: 12 IYSK-SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
IYS+ S+ + ++L +AKK+GA+ + + +G SV R G+++ IE N D + +
Sbjct: 9 IYSQISQVKDAVSEVLEHAKKLGATAAEAAMSSTSGLSVSTRMGEVETIEFNQDGGLGIS 68
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ + K G++ST+D K+L + A +IA+FT+ D G+ D+ LE +P D
Sbjct: 69 VYVGNNK----GSASTADLNPKTLRSVVEKAIDIAKFTSDDPCNGIADKELLEFSPKDLD 124
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
L+ PW +S + + + E A N + IVN++ ++ Q + NSHG ++GYP +
Sbjct: 125 LFHPWDVSPEQGIDLCHAAEQAALNADERIVNSDGASFSSHQGLRVYGNSHGLIAGYPRT 184
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS I +G+ MQRD+ Y+ + D L +G AA T+++L ++K+ T K P
Sbjct: 185 RHSISTMVIGKEGEHMQRDSAYTISRDQAGLKDAASVGLEAAAETLAKLNSQKLGTMKVP 244
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F A +A L I G +LYRKS+FL+DSLG ++FS + I E PH+L SS
Sbjct: 245 VIFRADIANSLFGHLVSAIGGGALYRKSSFLLDSLGTQVFSKTVNISERPHLLKGLASSP 304
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGVKT R ++ G +Q Y L++Y+A+K+ M TG++GG H+ ++ ++ +L
Sbjct: 305 FDSEGVKTLDREIIHGGELQTYLLASYAARKMNMTPTGHAGGIHNWLV----EQTHQDLA 360
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK M TGLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MFK
Sbjct: 361 ALLKTMGTGLLVTELMGQGVNTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFKG 420
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I AIG D+ R +GS+LIE M +AG
Sbjct: 421 ISAIGGDIERRGGIQTGSVLIEQMQVAG 448
>gi|344199157|ref|YP_004783483.1| peptidase U62 modulator of DNA gyrase [Acidithiobacillus
ferrivorans SS3]
gi|343774601|gb|AEM47157.1| peptidase U62 modulator of DNA gyrase [Acidithiobacillus
ferrivorans SS3]
Length = 448
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 199/442 (45%), Positives = 281/442 (63%), Gaps = 9/442 (2%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ DML+ A++ GAS + + G SV VR G+++ IE + DK + V +Y+ K
Sbjct: 14 LTQIVDDMLDLAREQGASAAEASASTSKGLSVTVRLGEVESIEYHQDKGLGVTVYLGQSK 73
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STSDF +K+L +T++AA IAR TA+D FAGL D N + LY PW +
Sbjct: 74 ----GSASTSDFSRKALSETVSAALTIARHTAADPFAGLADPALFATNFPELDLYHPWSI 129
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A +A RCE A + ++ I N+E + T + + N+ GF+ S+H +S S
Sbjct: 130 DADTAADLARRCEVAARDSDARIHNSEGGSLGTGEGVSVYGNTLGFIGSSRSSRHSLSCS 189
Query: 198 PIAIKGKE-MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA K MQRD WY L PE IG AA+R + RL A+K++T + PVLFE
Sbjct: 190 VIAEDTKGGMQRDYWYDVARAAAALASPEAIGKTAAQRALRRLDARKVATTRAPVLFENQ 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
+A ++ A ISG SLYRKS+FLVDSLGK++F HI+I E+P GSSSFD EGV
Sbjct: 250 VAASVIGHLASAISGGSLYRKSSFLVDSLGKQLFPEHIRIYEEPLRRRGLGSSSFDGEGV 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T+ R ++ +G+++GY L +YSA+KL MKTTGN+GGAH+L + +L+++L++M
Sbjct: 310 ATRNRDIIADGVLEGYILDSYSARKLNMKTTGNAGGAHNLTLQPGDA----SLEDLLRQM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTEL+G GIN +TGDYS+GA G+W+E+G+IQY VEEITI+ LQ MF+ + +GS
Sbjct: 366 GHGLLVTELIGFGINMVTGDYSRGAAGFWVEHGEIQYPVEEITIASTLQAMFQGMSVVGS 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+L + SILI+ M+IAG
Sbjct: 426 DMLIHGNTGCPSILIDEMMIAG 447
>gi|359434088|ref|ZP_09224380.1| PmbA protein [Pseudoalteromonas sp. BSi20652]
gi|357919238|dbj|GAA60629.1| PmbA protein [Pseudoalteromonas sp. BSi20652]
Length = 449
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 185/448 (41%), Positives = 284/448 (63%), Gaps = 9/448 (2%)
Query: 12 IYSK-SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
IYS+ S+ + ++L +AKK+GA+ + + +G SV R G+++ IE N D + +
Sbjct: 9 IYSQISQVKDAVAEVLEHAKKLGATAAEAAMSSTSGLSVSTRMGEVETIEFNQDGGLGIS 68
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ + K G++ST+D K+L + A +IA+FT+ D F G+ D+ LE NP D
Sbjct: 69 VYVGNNK----GSASTADLNPKTLRTVVEKAIDIAKFTSDDPFNGVADKELLEFNPKDLD 124
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW +S ++ + + E A N + IVN++ ++ Q + NSHG ++G+P +
Sbjct: 125 LYHPWDVSPEEGIELCHAAEQAALNADERIVNSDGASFSSHQGLRVYGNSHGLITGFPRT 184
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS I G++MQRD+ Y+ + D L+ +G AA T+++L ++K+ T K P
Sbjct: 185 RHSISTMVIGKDGEQMQRDSAYTVSRDQAGLNDAAAVGLEAAAETLAKLNSQKLGTMKVP 244
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F A +A L I G +LYRKS+FL+DSLG ++FS+ + I E PHIL SS
Sbjct: 245 VIFRADIANSLFGHLVSAIGGGALYRKSSFLLDSLGTQVFSNCVNIAERPHILKGLASSP 304
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGVKT R +++ G +Q Y L++Y+A+K+ M TG++GG H+ ++ ++ ++L
Sbjct: 305 FDSEGVKTFDREIIQGGELQTYLLASYAARKMNMTPTGHAGGIHNWLV----EQTHNDLT 360
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK M TGLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MFK
Sbjct: 361 ALLKTMGTGLLVTELMGQGVNIVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFKG 420
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I AIG D+ R +GS+LIE M IAG
Sbjct: 421 ISAIGGDIERRGGIQTGSVLIEQMQIAG 448
>gi|359445476|ref|ZP_09235210.1| PmbA protein [Pseudoalteromonas sp. BSi20439]
gi|358040663|dbj|GAA71459.1| PmbA protein [Pseudoalteromonas sp. BSi20439]
Length = 449
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 181/448 (40%), Positives = 277/448 (61%), Gaps = 9/448 (2%)
Query: 12 IYSK-SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
IYS+ S+ + ++L +AKK+GA+ + + +G SV R G+++ IE N D + +
Sbjct: 9 IYSQISQVKDAVSEVLEHAKKLGATAAEAAMSSTSGLSVSTRMGEVETIEFNQDGGLGIS 68
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ + K G++ST+D K+L + A +IA+FT+ D G+ D+ LE +P D
Sbjct: 69 VYVGNNK----GSASTADLNPKTLRSVVEKAIDIAKFTSDDPCNGIADKELLEFSPKDLD 124
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
L+ PW +S + + + E A N + IVN++ ++ Q + NSHG ++GYP +
Sbjct: 125 LFHPWDVSPEQGIDLCHAAEQAALNADERIVNSDGASFSSHQGLRVYGNSHGLIAGYPRT 184
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS I +G+ MQRD+ Y+ + D L +G AA T+++L ++K+ T K P
Sbjct: 185 RHSISTMVIGKEGEHMQRDSAYTISRDQAGLKDAASVGLEAAAETLAKLNSQKLGTMKVP 244
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F A +A L I G +LYRKS+FL+DSLG ++FS + I E PH+L SS
Sbjct: 245 VIFRADIANSLFGHLVSAIGGGALYRKSSFLLDSLGTQVFSKTVNISERPHLLKGLASSP 304
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGVKT R ++ G +Q Y L +Y+A+K+ M TG++GG H+ ++ ++ +L
Sbjct: 305 FDSEGVKTLDREIIHGGELQTYLLVSYAARKMNMTPTGHAGGIHNWLV----EQTHQDLA 360
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK M TGLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MFK
Sbjct: 361 ALLKTMGTGLLVTELMGQGVNTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFKG 420
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I AIG D+ R +GS+LIE M +AG
Sbjct: 421 ISAIGGDIERRGGIQTGSVLIEQMQVAG 448
>gi|392555759|ref|ZP_10302896.1| hypothetical protein PundN2_10017 [Pseudoalteromonas undina NCIMB
2128]
Length = 449
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 181/448 (40%), Positives = 278/448 (62%), Gaps = 9/448 (2%)
Query: 12 IYSK-SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
IYS+ S+ + ++L +AKK+GA+ + + +G SV R G+++ IE N D + +
Sbjct: 9 IYSQISQVKDAVSEVLEHAKKLGATAAEAAMSSTSGLSVSTRMGEVETIEFNQDGGLGIS 68
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ + K G++ST+D K+L + A +IA+FT+ D G+ D+ LE +P D
Sbjct: 69 VYVGNNK----GSASTADLNPKTLRTVVEKAIDIAKFTSDDPCNGIADKELLEFSPKDLD 124
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
L+ PW +S + + + E A N + IVN++ ++ Q + NSHG ++GYP +
Sbjct: 125 LFHPWDVSPEQGIDLCHAAEQAALNADERIVNSDGASFSSHQGLRVYGNSHGLIAGYPRT 184
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS I +G+ MQRD+ Y+ + D L +G AA T+++L ++K+ T K P
Sbjct: 185 RHSISTMVIGKEGEHMQRDSAYTISRDQAGLKDAASVGLEAAAETLAKLNSRKLGTMKVP 244
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F A +A L I G +LYRKS+FL+DSLG ++FS + I E PH+L SS
Sbjct: 245 VIFRADIANSLFGHLVSAIGGGALYRKSSFLLDSLGTQVFSKTVNISERPHLLKGLASSP 304
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGVKT R ++ G +Q Y L++Y+A+K+ M TG++GG H+ ++ ++ +L
Sbjct: 305 FDSEGVKTLDREIIHGGELQTYLLASYAARKMNMTPTGHAGGIHNWLV----EQTHQDLA 360
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK M TGLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L+++FK
Sbjct: 361 TLLKTMGTGLLVTELMGQGVNTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLRDIFKG 420
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I AIG D+ R +GS+LIE M IAG
Sbjct: 421 ISAIGGDIERRGGIQTGSVLIEQMQIAG 448
>gi|359455112|ref|ZP_09244359.1| PmbA protein [Pseudoalteromonas sp. BSi20495]
gi|358047827|dbj|GAA80608.1| PmbA protein [Pseudoalteromonas sp. BSi20495]
Length = 449
Score = 363 bits (933), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 185/448 (41%), Positives = 282/448 (62%), Gaps = 9/448 (2%)
Query: 12 IYSK-SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
IYS+ S+ + ++L +AKK+GA+ + + +G SV R G+++ IE N D + +
Sbjct: 9 IYSQISQVKDAVSEVLEHAKKLGATAAEAAMSSTSGLSVSTRMGEVETIEFNQDGGLGIS 68
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ + K G++ST+D K+L + A +IA+FT+ D F G+ D+ LE NP D
Sbjct: 69 VYVGNNK----GSASTADLNPKTLRTVVEKAIDIAKFTSDDPFNGVADKELLEFNPKDLD 124
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW +S ++ + + E A N + IVN++ ++ Q + NSHG ++G+P +
Sbjct: 125 LYHPWDVSPEEGIELCHAAEQAALNADERIVNSDGASFSSHQGLRVYGNSHGLIAGFPRT 184
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS I G+ MQRD+ Y+ D L+ +G AA T+++L ++K+ T K P
Sbjct: 185 RHSISTMVIGQDGEHMQRDSAYTVARDQAGLNDAAAVGLEAAAETLAKLNSQKLGTMKVP 244
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F A +A L I G +LYRKS+FL+DSLG ++FS+ + I E PHIL SS
Sbjct: 245 VIFRADIANSLFGHLVSAIGGGALYRKSSFLLDSLGTQVFSNCVNIAERPHILKGLASSP 304
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGVKT R +++ G +Q Y L++Y+A+K+ M TG++GG H+ ++ ++ ++L
Sbjct: 305 FDSEGVKTFDREIIQGGELQTYLLASYAARKMNMTPTGHAGGIHNWLV----EQTHNDLT 360
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK M TGLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MFK
Sbjct: 361 ALLKTMGTGLLVTELMGQGVNTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFKG 420
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I AIG D+ R +GS+LIE M IAG
Sbjct: 421 ISAIGGDIERRGGIQTGSVLIEQMQIAG 448
>gi|414071030|ref|ZP_11407006.1| PmbA protein [Pseudoalteromonas sp. Bsw20308]
gi|410806536|gb|EKS12526.1| PmbA protein [Pseudoalteromonas sp. Bsw20308]
Length = 449
Score = 363 bits (933), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 185/448 (41%), Positives = 283/448 (63%), Gaps = 9/448 (2%)
Query: 12 IYSK-SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
IYS+ S+ + ++L +AKK+GA+ + + +G SV R G+++ IE N D + +
Sbjct: 9 IYSQISQVKDAVAEVLEHAKKLGATAAEAAMSSTSGLSVSTRMGEVETIEFNQDGGLGIS 68
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ + K G++ST+D K+L + A +IA+FT+ D F G+ D+ LE NP D
Sbjct: 69 VYVGNNK----GSASTADLNPKTLRTVVEKAIDIAKFTSDDPFNGVADKELLEFNPKDLD 124
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW +S ++ + + E A N + IVN++ ++ Q + NSHG ++G+P +
Sbjct: 125 LYHPWDVSPEEGIELCHAAEQAALNADERIVNSDGASFSSHQGLRVYGNSHGLIAGFPRT 184
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS I G+ MQRD+ Y+ D L+ +G AA T+++L ++K+ T K P
Sbjct: 185 RHSISTMVIGQDGEHMQRDSAYTVARDQAGLNDAAAVGLEAAAETLAKLNSQKLGTMKVP 244
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F A +A L I G +LYRKS+FL+DSLG ++FS+ + I E PHIL SS
Sbjct: 245 VIFRADIANSLFGHLVSAIGGGALYRKSSFLLDSLGTQVFSNCVNIAERPHILKGLASSP 304
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGVKT R +++ G +Q Y L++Y+A+K+ M TG++GG H+ ++ ++ ++L
Sbjct: 305 FDSEGVKTFDREIIQGGELQTYLLASYAARKMNMMPTGHAGGIHNWLV----EQTHNDLT 360
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK M+TGLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MFK
Sbjct: 361 ALLKTMDTGLLVTELMGQGVNTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFKG 420
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I AIG D+ R +GS+LIE M IAG
Sbjct: 421 ISAIGGDIERRGGIQTGSVLIEQMQIAG 448
>gi|359441064|ref|ZP_09230969.1| PmbA protein [Pseudoalteromonas sp. BSi20429]
gi|392534055|ref|ZP_10281192.1| hypothetical protein ParcA3_08486 [Pseudoalteromonas arctica A
37-1-2]
gi|358037077|dbj|GAA67218.1| PmbA protein [Pseudoalteromonas sp. BSi20429]
Length = 449
Score = 363 bits (933), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 185/448 (41%), Positives = 283/448 (63%), Gaps = 9/448 (2%)
Query: 12 IYSK-SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
IYS+ S+ + ++L +AKK+GA+ + + +G SV R G+++ IE N D + +
Sbjct: 9 IYSQISQVKDAVAEVLEHAKKLGATAAEAAMSSTSGLSVSTRMGEVETIEFNQDGGLGIS 68
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ + K G++ST+D K+L + A +IA+FT+ D F G+ D+ LE NP D
Sbjct: 69 VYVGNNK----GSASTADLNPKTLRMVVEKAIDIAKFTSDDPFNGVADKELLEFNPKDLD 124
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW +S ++ + + E A N + IVN++ ++ Q + NSHG ++G+P +
Sbjct: 125 LYHPWDVSPEEGIELCHAAEQAALNADERIVNSDGASFSSHQGLRVYGNSHGLITGFPRT 184
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS I G++MQRD+ Y+ D L+ +G AA T+++L ++K+ T K P
Sbjct: 185 RHSISTMVIGQDGEQMQRDSAYTVARDQAGLNDAAAVGLEAAAETLAKLNSQKLGTMKVP 244
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F A +A L I G +LYRKS+FL+DSLG ++FS+ + I E PHIL SS
Sbjct: 245 VIFRADIANSLFGHLVSAIGGGALYRKSSFLLDSLGTQVFSNCVNIAERPHILKGLASSP 304
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGVKT R +++ G +Q Y L++Y+A+K+ M TG++GG H+ ++ ++ ++L
Sbjct: 305 FDSEGVKTFDREIIQGGELQTYLLASYAARKMNMTPTGHAGGIHNWLV----EQTHNDLT 360
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK M TGLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MFK
Sbjct: 361 ALLKTMGTGLLVTELMGQGVNTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFKG 420
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I AIG D+ R +GS+LIE M IAG
Sbjct: 421 ISAIGGDIERRGGIQTGSVLIEQMQIAG 448
>gi|225024596|ref|ZP_03713788.1| hypothetical protein EIKCOROL_01473 [Eikenella corrodens ATCC
23834]
gi|224942645|gb|EEG23854.1| hypothetical protein EIKCOROL_01473 [Eikenella corrodens ATCC
23834]
Length = 442
Score = 363 bits (932), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 186/448 (41%), Positives = 282/448 (62%), Gaps = 8/448 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +S+ + + L AK GA+ + + +E G SV VR +I+ IE DK++++
Sbjct: 2 FNHSEQTLRDVCAQALELAKAGGATAAEADVSESIGQSVQVRLQEIEHIEYQQDKSLDLT 61
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ G++ G +ST+DF ++ DT+ AA +IAR+TA D AGL + + D +
Sbjct: 62 VYV--GRRK--GRASTADFSPAAIADTVRAALDIARYTAEDPCAGLAEAALMATEFPDLQ 117
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
Y W LS +A +A R E A +S I N+E + T ++ NSHGFM S
Sbjct: 118 SYYEWPLSTAEAAELARRSEAAARAADSRISNSEGAYIQTGHYQYVYGNSHGFMQHQRSS 177
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H +S S +A G MQRD WY LD PE IG AA+R + RL A+ + T P
Sbjct: 178 RHSLSCSVVAGSGSGMQRDYWYDLARSSADLDTPEHIGQTAARRAVQRLGAQSLPTGSYP 237
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF+A ++ L+ A +SG +LYR+++FL DS+G++I + + + E+PH+ + S++
Sbjct: 238 VLFDATVSGSLIGHLAGALSGGALYRQTSFLQDSIGRQILPAALSLREEPHLPKALASTA 297
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD EGV T+ R V++NGIIQGYFLS+YSA+KLG+ TT N+GGAH+LI+ + + +
Sbjct: 298 FDAEGVATRPRFVIENGIIQGYFLSSYSARKLGLPTTANAGGAHNLIL----SHTHPSQA 353
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
E+L++M +GLLVTELMG G+N +TGDYS+GA G+W+ENG+I Y V+EITI+ +LQ+M
Sbjct: 354 ELLREMGSGLLVTELMGQGVNTLTGDYSRGAAGFWVENGQIAYPVQEITIASRLQDMLPN 413
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I +D L R+++ +GS+L+E M +AG
Sbjct: 414 IAGAANDALKRSAHKTGSLLLEQMTVAG 441
>gi|422349956|ref|ZP_16430844.1| hypothetical protein HMPREF9465_01734 [Sutterella wadsworthensis
2_1_59BFAA]
gi|404657805|gb|EKB30687.1| hypothetical protein HMPREF9465_01734 [Sutterella wadsworthensis
2_1_59BFAA]
Length = 446
Score = 363 bits (932), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 280/441 (63%), Gaps = 4/441 (0%)
Query: 19 QQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKK 78
++LA+ + +K +GA +S E + G SV VR G++D +E ++ + + +I G+K
Sbjct: 10 EELARWTVERSKSLGADCASAEVSHDKGLSVTVRMGEVDAVEHTEERVLTLNAWIG-GRK 68
Query: 79 MFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLS 138
G +ST+DF ++SL + AA +IAR +A D AGLP+ L+ + D L+ P+
Sbjct: 69 ---GCASTADFSERSLEAAVQAAVDIARVSAEDPAAGLPEAEDLQADMRDLSLWHPFEGG 125
Query: 139 IDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISP 198
+ +A +A E F + IVN++ T +T F LANS GF +GY +S+H + +P
Sbjct: 126 VQEAVRLASAVEEAVFEADERIVNSDGTNFSTSSGEFTLANSLGFCAGYRYSRHDMDAAP 185
Query: 199 IAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLA 258
IA MQRD W++ + L P +G AA RT++RL A+ +S+R+ VLF+AP+A
Sbjct: 186 IAEDDSGMQRDGWWTQGRAVEDLLDPAELGRTAAGRTVARLGARPLSSRRARVLFDAPVA 245
Query: 259 FELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKT 318
LL+I L++G + YR ++ L LG++I +H+ + EDP+++ + GS FD+EG
Sbjct: 246 TGLLDILEELLNGRAWYRHASCLEGRLGERILPAHVFVEEDPYLMRALGSGVFDDEGCAG 305
Query: 319 QKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNT 378
++R++V +G I+G FLS+YSA++LGM+TTGN GGA++L + S +T+ D + ML+++ T
Sbjct: 306 RRRMIVSDGRIEGIFLSSYSARRLGMRTTGNLGGAYNLRLSSTETRPEDTRRAMLERLGT 365
Query: 379 GLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDV 438
G LVTEL+G G+N ++GDYS+GA G+W+ENG+I VE +TI+ + M K I AIG+D
Sbjct: 366 GFLVTELIGQGLNAVSGDYSRGASGFWVENGRIVAPVEGVTIASNILTMMKTIEAIGADE 425
Query: 439 LTRNSNTSGSILIENMIIAGK 459
SGS+LI ++++AG+
Sbjct: 426 HDTGVRRSGSLLIPDLMLAGE 446
>gi|332533760|ref|ZP_08409618.1| putative enzyme for maturation of Microcin B17 and degradation of
CcdA [Pseudoalteromonas haloplanktis ANT/505]
gi|332036815|gb|EGI73277.1| putative enzyme for maturation of Microcin B17 and degradation of
CcdA [Pseudoalteromonas haloplanktis ANT/505]
Length = 449
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 185/448 (41%), Positives = 282/448 (62%), Gaps = 9/448 (2%)
Query: 12 IYSK-SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
IYS+ S+ + ++L +AKK+GA+ + + +G SV R G+++ IE N D + +
Sbjct: 9 IYSQISQVKDAVAEVLEHAKKLGATAAEAAMSSTSGLSVSTRMGEVETIEFNQDGGLGIS 68
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ + K G++ST+D K+L + A +IA+FT+ D F G+ D+ LE NP D
Sbjct: 69 VYVGNNK----GSASTADLNPKTLRTVVEKAIDIAKFTSDDPFNGVADKELLEFNPKDLD 124
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW +S ++ + + E A N + IVN++ ++ Q + NSHG ++G+P +
Sbjct: 125 LYHPWDVSPEEGIELCHAAEQAALNADERIVNSDGASFSSHQGLRVYGNSHGLIAGFPRT 184
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS I G+ MQRD+ Y+ D L+ +G AA T+++L ++K+ T K P
Sbjct: 185 RHSISTMVIGKDGEHMQRDSAYTVARDQAGLNDAAAVGLEAAAETLAKLNSQKLGTMKVP 244
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F A +A L I G +LYRKS+FL+DSLG ++FS+ + I E PHIL SS
Sbjct: 245 VIFRADIANSLFGHLVSAIGGGALYRKSSFLLDSLGTQVFSNCVNIAERPHILKGLASSP 304
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGVKT R +++ G +Q Y L++Y+A+K+ M TG++GG H+ ++ ++ ++L
Sbjct: 305 FDSEGVKTFDREIIQGGELQTYLLASYAARKMNMTPTGHAGGIHNWLV----EQTHNDLT 360
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK M TGLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MFK
Sbjct: 361 ALLKTMGTGLLVTELMGQGVNTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFKG 420
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I AIG D+ R +GS+LIE M IAG
Sbjct: 421 ISAIGGDIERRGGIQTGSVLIEQMQIAG 448
>gi|315125381|ref|YP_004067384.1| hypothetical protein PSM_A0278 [Pseudoalteromonas sp. SM9913]
gi|315013894|gb|ADT67232.1| hypothetical protein PSM_A0278 [Pseudoalteromonas sp. SM9913]
Length = 449
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 180/448 (40%), Positives = 277/448 (61%), Gaps = 9/448 (2%)
Query: 12 IYSK-SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
IYS+ S+ + ++L +AKK+GA+ + + +G SV R G+++ IE N D + +
Sbjct: 9 IYSQISQVKDAVSEVLEHAKKLGATAAEAAMSSTSGLSVSTRMGEVETIEFNQDGGLGIS 68
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ + K G++ST+D K+L + A +IA+FT+ D G+ D+ LE P D
Sbjct: 69 VYVGNNK----GSASTADLNPKTLRAVVEKAIDIAKFTSDDPCNGIADKELLEFAPKDLD 124
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
L+ PW +S + + + E A N + IVN++ ++ Q + NSHG ++G+P +
Sbjct: 125 LFHPWDVSPEQGIDLCHAAEQAALNADERIVNSDGASFSSHQGLRVYGNSHGLIAGFPRT 184
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS I +G+ MQRD+ Y+ + D L +G AA T+++L ++K+ T K P
Sbjct: 185 RHSISTMVIGKEGEHMQRDSAYTISRDQAGLKDAASVGLEAAAETLAKLNSQKLGTMKVP 244
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F A +A L I G +LYRKS+FL+DSLG ++FS + I E PH+L SS
Sbjct: 245 VIFRADIANSLFGHLVSAIGGGALYRKSSFLLDSLGTQVFSKTVNISERPHLLKGLASSP 304
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGVKT R ++ G +Q Y L++Y+A+K+ M TG++GG H+ ++ ++ +L
Sbjct: 305 FDSEGVKTLDREIIHGGELQTYLLASYAARKMNMTPTGHAGGIHNWLV----EQTHQDLT 360
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK M TGLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MFK
Sbjct: 361 ALLKTMGTGLLVTELMGQGVNTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFKG 420
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I AIG D+ R +GS+LIE M +AG
Sbjct: 421 ISAIGGDIERRGGIQTGSVLIEQMQVAG 448
>gi|374621950|ref|ZP_09694479.1| microcin-processing peptidase 1 [Ectothiorhodospira sp. PHS-1]
gi|373941080|gb|EHQ51625.1| microcin-processing peptidase 1 [Ectothiorhodospira sp. PHS-1]
Length = 447
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 185/447 (41%), Positives = 281/447 (62%), Gaps = 8/447 (1%)
Query: 12 IYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVII 71
+ +QL +L+ A++ GA+ + + + G SV VR G+++ +E + D+ + V +
Sbjct: 8 VLDAQALEQLVGQVLDEARRAGATAAEVAVSHDTGLSVNVRLGEVETLEFHRDQVVGVTV 67
Query: 72 YIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKL 131
YI G++ G++S+SD +SL + AA IAR+TA D AGL D + + L
Sbjct: 68 YI--GRRK--GSASSSDLRARSLREVAEAACRIARYTAEDPCAGLADAGLMARDYPALDL 123
Query: 132 YTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSK 191
PW L DDA IA RCE A ++ IVN+E V T + + N+HGF+ GY ++
Sbjct: 124 DHPWDLEADDAIEIARRCEAAARAEDARIVNSEGGSVNTFRGTAIYGNTHGFVGGYAATR 183
Query: 192 HIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPV 251
H +S S +A G M+RD WY+ + L+ PE +G AA+R + RL A+++STR+ PV
Sbjct: 184 HSLSCSVLAGDGGTMERDYWYTVAREAGALETPESVGVEAARRAVRRLNARRLSTRRVPV 243
Query: 252 LFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSF 311
L+ +A +L F I G++LYRKS+FLVD LG++IF + I E PHI + GS+ F
Sbjct: 244 LYAPDVARSMLGHFVAAIRGSALYRKSSFLVDRLGERIFPEFVHIHEQPHIPRALGSAPF 303
Query: 312 DNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKE 371
D EGV T+ R +V++G ++ Y L +YS +KLGM+TTGN+GG +L I + + +
Sbjct: 304 DGEGVATRARDLVRDGHLESYALDSYSGRKLGMETTGNAGGVRNLTI----DPGTGDARA 359
Query: 372 MLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQI 431
+L++M TGLLVTEL+G GIN + GDYS+GA G+W+ENG+I Y V EIT++G L++MF +
Sbjct: 360 LLREMGTGLLVTELIGHGINMVNGDYSRGAAGFWVENGEILYPVSEITVAGNLKDMFMNL 419
Query: 432 VAIGSDVLTRNSNTSGSILIENMIIAG 458
VA+GSDV R + +GS+LI+ + +AG
Sbjct: 420 VAVGSDVDLRANIRTGSLLIDGLTVAG 446
>gi|335042169|ref|ZP_08535196.1| putative Zn-dependent protease [Methylophaga aminisulfidivorans MP]
gi|333788783|gb|EGL54665.1| putative Zn-dependent protease [Methylophaga aminisulfidivorans MP]
Length = 444
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 185/441 (41%), Positives = 272/441 (61%), Gaps = 7/441 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E ++ A+ L AKK GAS + + + G SV VR+ +++ +E NND + + +Y
Sbjct: 9 ELERAAEMALTEAKKQGASAAEVGISHSEGLSVTVRQREVETLEHNNDTGLGITVYFGHS 68
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K +SSTSD + ++ + + AA NIA+ T +D AGL D N + + LY PW
Sbjct: 69 K----ASSSTSDLSEAAIAEAVKAACNIAKHTQADEAAGLADANLMATAFPELSLYHPWA 124
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
+ +D A IA CE + +S I N+E V++ + ANSHGF+ S+H +S
Sbjct: 125 IDVDKAIDIATLCEQAGLDSDSRISNSEGATVSSHSGQRVYANSHGFIGATQSSRHSLSA 184
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
+ IA + MQRD WY D L E IG AA+RT+SRL A ++ T PV+F A
Sbjct: 185 TLIAQDERGMQRDYWYDIKRDANDLASAESIGLKAAERTLSRLGAGEVKTGSYPVIFTAQ 244
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
+A L I G +LYRK++FL+D G++IF I + E PHIL + GS+SFD EGV
Sbjct: 245 MAPSLFGQLISAIRGGALYRKASFLLDKKGEQIFPEFIHVHEQPHILKALGSASFDGEGV 304
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
TQ R ++ +G++QGY L +Y+A++LGM+TTGN+GG H+L I S+ + +L ++K+M
Sbjct: 305 ATQNRDIILDGVLQGYVLDSYAARRLGMQTTGNAGGVHNLTIDSS---TDADLAALIKQM 361
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
+ G++VTE MG G+N + GDYS+GA G+W+ENG+IQY V+E TI+ LQ+MF IV +GS
Sbjct: 362 DKGIIVTETMGMGVNIVNGDYSQGAAGFWVENGQIQYPVDEFTIASNLQDMFMGIVDVGS 421
Query: 437 DVLTRNSNTSGSILIENMIIA 457
DV R + GS+L+E M+IA
Sbjct: 422 DVDIRGNTRCGSVLLEKMMIA 442
>gi|288942221|ref|YP_003444461.1| peptidase U62 modulator of DNA gyrase [Allochromatium vinosum DSM
180]
gi|288897593|gb|ADC63429.1| peptidase U62 modulator of DNA gyrase [Allochromatium vinosum DSM
180]
Length = 449
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 177/444 (39%), Positives = 267/444 (60%), Gaps = 8/444 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ QQ+ +D+L AK+ GAS + G V VR G+++ +E D + V +Y
Sbjct: 14 ARLQQIIEDLLKEAKRQGASAAEASVGGSAGLEVAVRLGEVETVEHTRDNGLGVTLYFGH 73
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
K G++STSD ++ D ++AA IA+ T D A L + D L PW
Sbjct: 74 RK----GSASTSDLSPAAVRDAVSAARAIAQHTQDDPCAHLAPPELMATEIPDLDLCHPW 129
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
+ ++ A +A CE+ A + IVN+E ++T + NSHGF+ GYP ++H ++
Sbjct: 130 AIEVEQAIELAIACEDAARAHDPRIVNSEGASLSTHLGIHVAGNSHGFLGGYPTTRHSLN 189
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
+ I G+ MQRD W+++ LD +G AA+RT++RL A+++ TR+ PVLF A
Sbjct: 190 CAVIGQDGELMQRDYWWTTARAAADLDSARSVGERAAERTVARLGARRLGTREAPVLFRA 249
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A LL I+G SLYR+S+FL+D LG++IF ++I E PH+L S+ +D +G
Sbjct: 250 EVATGLLRSLVSAINGASLYRRSSFLLDHLGQRIFPEFVRIHEQPHLLRGLSSAPYDGDG 309
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V T+ + +V++G++Q Y L TYS +LGM TTGN+GG +L I + +L++
Sbjct: 310 VATRAKDLVRDGVLQTYVLDTYSGCRLGMPTTGNAGGVRNLAIEMGDLDRA----ALLRE 365
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGL+VTELMG G+N +TGDYS+GA G+W+ENG+IQY VEEITI+G L+ MF +VA+G
Sbjct: 366 MGTGLMVTELMGHGVNPVTGDYSRGASGFWVENGEIQYPVEEITIAGNLKQMFAGLVAVG 425
Query: 436 SDVLTRNSNTSGSILIENMIIAGK 459
+D S +GS LI+ M IAG+
Sbjct: 426 NDCDFPGSTRTGSWLIDRMTIAGE 449
>gi|430762663|ref|YP_007218520.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Thioalkalivibrio nitratireducens DSM 14787]
gi|430012287|gb|AGA35039.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Thioalkalivibrio nitratireducens DSM 14787]
Length = 452
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 176/446 (39%), Positives = 275/446 (61%), Gaps = 6/446 (1%)
Query: 13 YSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIY 72
++ Q+ +L + + GAS + + + G SV VR+G+++ +E D+ M ++ Y
Sbjct: 12 HTPESLQERVARVLEHTRACGASAAQVVVSHNVGLSVTVRRGEVETLEHERDQQMALVAY 71
Query: 73 IQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLY 132
+ G +ST+DF +L T AA IAR T D +AGLPD +T + + +L
Sbjct: 72 FGQSR----GAASTTDFSPAALQQTAEAACRIARHTEPDPWAGLPDADTQARDWPELELD 127
Query: 133 TPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKH 192
PW D A +A R E F + + N+E V T+++ F L ++ GFM GY ++H
Sbjct: 128 HPWDCPSDQAIELARRTEAAGFALDPRVDNSEGASVGTRRAMFWLGDTQGFMGGYCSTRH 187
Query: 193 IISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252
+S + +A MQRD YS D L + E IG AA+R + RL A+K+ TR+CPVL
Sbjct: 188 TLSCALVARDAGGMQRDYEYSVARDAVHLAEAEAIGRAAAERALRRLGARKLGTRQCPVL 247
Query: 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFD 312
F +A L+ F R I G++ YR+S+FL+D+ G+ +F +QI E P + G+ GS+ FD
Sbjct: 248 FMPEMARSLIGSFTRAIGGSAQYRRSSFLLDAAGQAVFPDWMQIDELPLLPGALGSAPFD 307
Query: 313 NEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEM 372
EGV+T++R ++ G+++GY L +YSA++LG++TTGN+GGA ++ + + ++
Sbjct: 308 GEGVRTRERALIAGGVLEGYILDSYSARRLGLQTTGNAGGARNVTVRPH--PGDRGFTDL 365
Query: 373 LKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIV 432
L M TGLLVTEL+G G+N +TGDYS+GA G+W+ENG I Y VEEITI+G L++M+++I
Sbjct: 366 LADMGTGLLVTELIGQGVNAVTGDYSRGAAGFWVENGAIAYPVEEITIAGNLRDMYRRIA 425
Query: 433 AIGSDVLTRNSNTSGSILIENMIIAG 458
A+G+D R + +GS+LIE+M +AG
Sbjct: 426 AVGNDTDLRGNTRTGSVLIESMTVAG 451
>gi|154706071|ref|YP_001424149.1| microcin-processing peptidase 1 [Coxiella burnetii Dugway
5J108-111]
gi|154355357|gb|ABS76819.1| microcin-processing peptidase 1 [Coxiella burnetii Dugway
5J108-111]
Length = 440
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 187/414 (45%), Positives = 263/414 (63%), Gaps = 8/414 (1%)
Query: 46 GFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIA 105
GFSV VR G ++ +E + +M++ +Y Q GN+ TSD +++ A +
Sbjct: 35 GFSVDVRLGDVETLEHHRKNSMDITVYHQQRT----GNACTSDLSLEAMERAFEKASAMT 90
Query: 106 RFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNEN 165
+FT D AGL D N + + D L PW +++ A +A CE A N + I +E
Sbjct: 91 QFTQEDPCAGLADANQMARDYPDLALSHPWNITLKQAISLAIECETLARNHDPRIKQSEG 150
Query: 166 TGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPE 225
++T + + NSHGF+ YP + H + IA + + MQRD+ Y+ DPKKL E
Sbjct: 151 ANLSTYRIFNIYGNSHGFLGYYPSTWHTLGCELIAEQDRFMQRDHDYTLARDPKKLSSIE 210
Query: 226 IIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSL 285
I A++TI RL A+++STR+CPV+F AP+A +L F ISG++LYR ++FL + L
Sbjct: 211 TIAIQTAEKTIRRLGARRLSTRQCPVIFNAPVARSVLRSFISAISGSNLYRGTSFLQNQL 270
Query: 286 GKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMK 345
++IF + I +DPH+ G GS+SFD GVKT+K V+NG++ Y L TYSAKKL M+
Sbjct: 271 HQQIFPEFVSIYQDPHLPGEIGSTSFDESGVKTRKINFVENGVLTHYVLGTYSAKKLAME 330
Query: 346 TTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYW 405
TTGNSGG ++L I T S NL +LK+M GLLVTELMG G+N ITG+YS+GAFG+W
Sbjct: 331 TTGNSGGVYNLFI----TTSDKNLTGLLKEMQCGLLVTELMGQGVNLITGNYSRGAFGFW 386
Query: 406 IENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IENG+IQY VEEITI+G L++MFKQI IG+D+ R + +GSILIE M +AG+
Sbjct: 387 IENGEIQYPVEEITIAGNLKDMFKQIQLIGNDIDPRGNIKTGSILIEQMTVAGE 440
>gi|220935432|ref|YP_002514331.1| microcin-processing peptidase 1 [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219996742|gb|ACL73344.1| microcin-processing peptidase 1 [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 434
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 180/442 (40%), Positives = 277/442 (62%), Gaps = 8/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+ + + ML+ A+K GAS + + G SV VR G+++ +E + D+ + + +Y K
Sbjct: 1 MESIVEQMLDEARKAGASSAEAAASNDLGLSVNVRLGEVETLEHHKDQGVAITVYFGQRK 60
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G +STSD ++L + + AA IAR+TA D+ AGL D + + D L PW L
Sbjct: 61 ----GTASTSDLAPEALREAVQAACRIARYTAEDSCAGLADPALMAKDWPDLDLDHPWDL 116
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
S++ A +A CE A F++ I+N+E T + + NSHGF+ Y ++H +S S
Sbjct: 117 SVEHAIELARACEATAREFDARIINSEGASTNTMRGMAVYGNSHGFLGAYTGTRHSLSCS 176
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
+A K MQRD WYS D L+ PE +G AA+R + RL ++++TR+CP ++ +
Sbjct: 177 VVAADEKGMQRDYWYSVARDAAGLESPEAVGREAARRAVRRLGGRRLTTRQCPAIYVPEM 236
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ F + G +LYRK++FLVD+LG+ +F ++I E PH+ G+ GS FD+EGV
Sbjct: 237 ARSLIGHFVGAVRGGALYRKASFLVDALGQSVFPDFVRIHEQPHLPGALGSVPFDSEGVA 296
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T+ R +V G++QGY L +YSA+KLGM TTGN+GG H+L I +L ++++ +
Sbjct: 297 TRPRDLVTGGVLQGYVLDSYSARKLGMSTTGNAGGVHNLTI----EPGEQDLDDLIRTLG 352
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGLLVTEL+G GIN +TGDYS+GA G+W+ENG+I Y VEEIT++G L+ + K I A+G D
Sbjct: 353 TGLLVTELIGHGINLVTGDYSRGAAGFWVENGEIAYPVEEITVAGNLRQLLKGIQAVGRD 412
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
V ++ +GS+L+E + +AG+
Sbjct: 413 VNVDSNIRTGSLLLEQVTVAGE 434
>gi|238021498|ref|ZP_04601924.1| hypothetical protein GCWU000324_01398 [Kingella oralis ATCC 51147]
gi|237868478|gb|EEP69484.1| hypothetical protein GCWU000324_01398 [Kingella oralis ATCC 51147]
Length = 442
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 183/429 (42%), Positives = 270/429 (62%), Gaps = 8/429 (1%)
Query: 30 KKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDF 89
K+ GA+ + ++ +E G SV VR +I+ IE DK++++ +++ K G +ST+D
Sbjct: 21 KQKGATAAEVDLSESLGQSVQVRWREIEQIEYQQDKSLDITVFVGHSK----GRASTADL 76
Query: 90 CKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRC 149
+L T+ AA +IAR+TA+D FAG+ D + + + D Y W LS ++A IA C
Sbjct: 77 SPAALASTVQAACDIARYTAADPFAGIADASLMATHIADLDRYHEWDLSSENAIAIAKEC 136
Query: 150 ENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRD 209
E A + +S I N+E + T F+ ANSHGF ++H +S S +A M+RD
Sbjct: 137 EEAALSSDSRISNSEGASINTSHFQFVYANSHGFCQHQRGTRHSLSCSVVASDANGMERD 196
Query: 210 NWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLI 269
WY D + LD P IG AA+R RL + ++T P+LF+A +A L+ +
Sbjct: 197 YWYDIACDRQDLDTPAHIGNIAAERATRRLAPQSVATGSYPILFDATVANSLIGHIVGGL 256
Query: 270 SGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGII 329
+G +LYR+S+FL DSLG +I S I + E+PHI + GS+ FD+EGV TQ R V++NGI+
Sbjct: 257 TGGALYRQSSFLQDSLGTQILPSFISLREEPHIPRALGSTYFDSEGVATQPRFVIENGIV 316
Query: 330 QGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDG 389
+GYFL +YSA+KL +TGN+GGAH+L + T ++++ +ML +M TGLL+TELMG G
Sbjct: 317 RGYFLDSYSARKLKQTSTGNAGGAHNLYL----TATAESQAQMLSQMGTGLLITELMGQG 372
Query: 390 INYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSI 449
+N +TGDYS+GA G+W+ENG I++ V ITI+G L+ M + IVA GSD S+ GSI
Sbjct: 373 VNMLTGDYSRGAAGFWVENGIIRHPVSGITIAGSLKEMLRNIVATGSDFRRNASSKIGSI 432
Query: 450 LIENMIIAG 458
LI NM +AG
Sbjct: 433 LISNMTVAG 441
>gi|374260759|ref|ZP_09619353.1| hypothetical protein LDG_5708 [Legionella drancourtii LLAP12]
gi|363538925|gb|EHL32325.1| hypothetical protein LDG_5708 [Legionella drancourtii LLAP12]
Length = 452
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 187/453 (41%), Positives = 285/453 (62%), Gaps = 8/453 (1%)
Query: 7 NRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
N S+ S +E L D+L AKK GA+ + + N GFSV VR G ++ + + DK
Sbjct: 8 NNSEVHKSITELTSLMNDVLELAKKEGATDAMVAVNNDRGFSVDVRMGAVETVAFSEDKG 67
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +YI K G +S++D ++L + AA +IAR +A D+ GL D+ +
Sbjct: 68 VGLTVYIGQRK----GGASSTDTSPEALRTMVKAACDIARVSAEDSCFGLADKELMTKEH 123
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D L+ PW + A +A +CE+ A + + I N++ V++ +SH AN++G
Sbjct: 124 PDLDLFHPWDVDPQQAIDLALKCESYALSLDKRITNSDGVNVSSYESHHGFANTNGGFGF 183
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
++H +S S IA +G+EMQRD Y++ + K L P +I A +R +SRL A++I T
Sbjct: 184 VHSTRHGLSCSLIAAEGEEMQRDYDYTTVRNAKDLVDPLVIAQNAVERALSRLGARQIKT 243
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
+ PV+F + ++ L F ISG++LYRK+TFL+DS+G++IF I+I E PH+LG+
Sbjct: 244 QTTPVIFSSRVSSGLFASFINAISGSNLYRKNTFLLDSIGQQIFPEFIRIYEQPHLLGAL 303
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
GSS FD+EGV T+ L+V NG + Y L +YSA++LG+KTT NS G H+L + ++
Sbjct: 304 GSSPFDSEGVPTRPNLIVDNGRVMQYVLGSYSARRLGLKTTANSDGVHNLTV----DPTT 359
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+L E+L +M TGLLVTELMG G+N +TGDYS+GA GYW+ENG IQ+ V+EITI+G L+
Sbjct: 360 GDLSELLNEMGTGLLVTELMGQGVNGVTGDYSRGASGYWVENGVIQFPVDEITIAGNLKE 419
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
MF+ I+A+G+D+ GS+LIE M++AG+
Sbjct: 420 MFQSILAVGNDINPNIPMRCGSVLIEKMMVAGE 452
>gi|289209145|ref|YP_003461211.1| peptidase U62 modulator of DNA gyrase [Thioalkalivibrio sp. K90mix]
gi|288944776|gb|ADC72475.1| peptidase U62 modulator of DNA gyrase [Thioalkalivibrio sp. K90mix]
Length = 457
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 179/447 (40%), Positives = 275/447 (61%), Gaps = 8/447 (1%)
Query: 13 YSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIY 72
+S Q Q L+ A+ GAS + G + VRKG+I+ +E D+++++I Y
Sbjct: 19 HSADSLQDRVQRTLDAARAQGASDVQAVVSHSVGLELSVRKGEIETLEYERDQSLSLIAY 78
Query: 73 IQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLY 132
K G +ST+DF +++L DT+ AA IAR+T D AG+PD D L
Sbjct: 79 FGQSK----GAASTTDFGEQALLDTVEAACRIARYTEPDPHAGMPDPALKAGEWDDLDLD 134
Query: 133 TPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKH 192
PW + A +A E F +S I N+E V+T+++ L +S GFM GY ++H
Sbjct: 135 HPWDCDAEQATELARAIEAAGFAADSRIENSEGASVSTRRAIAFLGDSQGFMGGYRSTRH 194
Query: 193 IISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252
+S + +A MQRD Y+ LD E IG AA+RT+ RL +K+STR CPVL
Sbjct: 195 SMSCALVARDDAGMQRDYAYTVARHAADLDACEAIGRQAAERTVRRLGGRKLSTRSCPVL 254
Query: 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFD 312
F +A L+ F R ISG + YR S+FL++++G+ +F +QI E P + GS+ FD
Sbjct: 255 FAPEMARTLIGSFTRAISGPAQYRHSSFLLNAVGESVFPDWMQIEERPLTPRALGSAPFD 314
Query: 313 NEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEM 372
EGV+T+ R +V +G++Q Y L +Y+A++LG+++TGN+GGA ++ + + + +
Sbjct: 315 GEGVRTRNRPLVADGVLQSYTLDSYAARRLGLESTGNAGGARNVTVKPGER----DFAAL 370
Query: 373 LKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIV 432
L +M TG LVTEL+G G+N +TGDYS+GA G+W+ENG+IQY VEEITI+G L++++++IV
Sbjct: 371 LAEMGTGFLVTELIGQGVNAVTGDYSRGAAGFWVENGEIQYPVEEITIAGNLKDIYQRIV 430
Query: 433 AIGSDVLTRNSNTSGSILIENMIIAGK 459
A+G+DV R + +GSIL+E+M +AG+
Sbjct: 431 AVGTDVDRRGNIHTGSILVESMTVAGE 457
>gi|71279303|ref|YP_271199.1| pmbA protein [Colwellia psychrerythraea 34H]
gi|71145043|gb|AAZ25516.1| pmbA protein [Colwellia psychrerythraea 34H]
Length = 453
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 182/443 (41%), Positives = 276/443 (62%), Gaps = 6/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
SE ++ +L AK +GA + + + G SV R G+++ +E ND + + +Y ++
Sbjct: 16 SEVKERVATVLELAKSLGADGAEVAMSRQQGLSVSTRMGEVENVEFTNDGGLGITVY-RE 74
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
G+K G++ST+D +++L T+ AA NIA++T+ D+ +GL D++ L M P+D LY P
Sbjct: 75 GRK---GSASTADLSEQALLKTVTAAVNIAKYTSVDDCSGLADKSLLAMQPIDLDLYHPH 131
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
+S ++A +A CE A + + N++ T + NSHG + GYP ++H +S
Sbjct: 132 EISTEEAIELAKECEESALAVDPRVSNSDGASFDTFAGFKVYGNSHGQLVGYPSTRHSLS 191
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
IA G +M+RD Y+ N + L+ + +G A++ +SRLK + I T K PVLF +
Sbjct: 192 CVMIASDGDDMERDYAYTVNREFSLLESAKNVGLQASQEVLSRLKPQTIPTGKVPVLFRS 251
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A + F ISG +LYRKS+FL+D +GK +F + I E PHI + SS+FD+EG
Sbjct: 252 DIANTIWGHFIAAISGGNLYRKSSFLLDEIGKDVFPKFLNISERPHIAKALASSAFDSEG 311
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V TQ R ++ G +Q Y L++YSA+KLG+ TTG++GG H+ ++ + S MLK
Sbjct: 312 VLTQDREIISQGALQTYLLTSYSARKLGLTTTGHAGGIHNWLVDAQGHDGS--FDAMLKT 369
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
+ TGLLVTELMG G+N + GDYS+GA G+W+ENG+I Y V EITI+G L MFK IVA+G
Sbjct: 370 LGTGLLVTELMGQGVNVVNGDYSRGASGFWVENGEIAYPVSEITIAGNLAQMFKGIVAVG 429
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
SDV R S +GSILI+ + +AG
Sbjct: 430 SDVDMRGSIRTGSILIDELQVAG 452
>gi|77361662|ref|YP_341237.1| hypothetical protein PSHAa2747 [Pseudoalteromonas haloplanktis
TAC125]
gi|76876573|emb|CAI87795.1| putative enzyme for maturation of Microcin B17 and degradation of
CcdA [Pseudoalteromonas haloplanktis TAC125]
Length = 449
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 184/448 (41%), Positives = 279/448 (62%), Gaps = 9/448 (2%)
Query: 12 IYSK-SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
IYS+ S+ + +L +AKK+GA+ + + +G SV R G+++ IE N D + +
Sbjct: 9 IYSQISQVKDAVAAVLEHAKKLGATAAEAAMSSTSGLSVSTRMGEVETIEFNQDGGLGIS 68
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ + K G++ST+D K+L + A +IA+FT+ D F G+ D+ LE P D
Sbjct: 69 VYVGNNK----GSASTADLSPKTLRTVVEKAIDIAKFTSDDPFNGVADKELLEFAPKDLD 124
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW +S + + E A N + IVN++ ++ Q + NSHG ++G+P +
Sbjct: 125 LYHPWDVSPEQGIEFCHAAEQAALNADERIVNSDGASFSSHQGLRVYGNSHGLIAGFPRT 184
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H IS I G++MQRD+ Y+ D L+ +G AA T+++L ++K+ T K P
Sbjct: 185 RHSISTMVIGKDGEQMQRDSAYTVARDQAGLNDAAAVGLEAAAETLAKLNSQKLGTMKVP 244
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F A +A L I G +LYRKS+FL+DSLG ++FS+ + I E PHIL SS
Sbjct: 245 VIFRADIANSLFGHLVSAIGGGALYRKSSFLLDSLGTQVFSNCVNIAERPHILKGLASSP 304
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGVKT R +++ G +Q Y L++Y+A+K+ M TG++GG H+ ++ ++ ++L
Sbjct: 305 FDSEGVKTFDREIIQGGELQTYLLASYAARKMNMTPTGHAGGIHNWLV----EQTHNDLT 360
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+LK M TGLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MFK
Sbjct: 361 ALLKTMGTGLLVTELMGQGVNTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFKG 420
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I AIG D+ R +GS+LIE M IAG
Sbjct: 421 ISAIGGDIERRGGIQTGSVLIEQMQIAG 448
>gi|344338214|ref|ZP_08769147.1| peptidase U62 modulator of DNA gyrase [Thiocapsa marina 5811]
gi|343802268|gb|EGV20209.1| peptidase U62 modulator of DNA gyrase [Thiocapsa marina 5811]
Length = 449
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 170/445 (38%), Positives = 273/445 (61%), Gaps = 10/445 (2%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ +Q +D+L AK+ GA+ + G V VR G+++ +E D + + +Y +
Sbjct: 14 ARLKQTIEDLLKEAKRRGATAAEASVGSSAGLEVSVRLGEVETVEHTRDNGLGITVYFGN 73
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
K G++STSD +L D + AA IA T D A L D + D LY PW
Sbjct: 74 RK----GSASTSDLSTGALRDAVKAACAIAEHTQEDPCAHLADAALMAAEIPDLDLYHPW 129
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L ++DA IA CE+ A ++ IVN+E ++T + NSHGF++GYP S+H +S
Sbjct: 130 HLGVEDAIEIAAACEDSARGYDPRIVNSEGASLSTHTGIQVYGNSHGFVAGYPTSRHGLS 189
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
+ I +G+ +QRD+W++S LD ++G AA+RT++RL ++++ T + PVLF A
Sbjct: 190 CAVIGQEGESLQRDHWWTSARAAADLDSARMVGERAAERTVARLGSRRVPTCQVPVLFRA 249
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L+ I G S+YR+++FL+D LG++IF ++I E+PH+ S+ FD +G
Sbjct: 250 EVATGLIRSLVSAIQGGSIYRRTSFLLDYLGERIFPDFVRIHEEPHLPRGLSSAPFDGDG 309
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLII-ISNKTKSSDNLKEMLK 374
V T+ + ++ +G++Q Y L YS +LGM+TTGN+GG +L I + + +++ +L+
Sbjct: 310 VATRAKDLITDGVLQTYLLDAYSGCRLGMQTTGNAGGVRNLRIGMGDLDRAA-----LLR 364
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGL+VTELMG G+N +TGDYS+GA G+W+E G+I++ VEEITI+G L+ M+ ++A+
Sbjct: 365 EMGTGLMVTELMGHGVNPVTGDYSRGAAGFWVEGGEIRHPVEEITIAGNLKQMYAGLLAV 424
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
G+D S +GS LI+ M IAG+
Sbjct: 425 GNDCDYSGSTRTGSWLIDKMTIAGE 449
>gi|153209298|ref|ZP_01947333.1| TldD/PmbA family protein [Coxiella burnetii 'MSU Goat Q177']
gi|212219035|ref|YP_002305822.1| microcin-processing peptidase 1 [Coxiella burnetii CbuK_Q154]
gi|120575414|gb|EAX32038.1| TldD/PmbA family protein [Coxiella burnetii 'MSU Goat Q177']
gi|212013297|gb|ACJ20677.1| microcin-processing peptidase 1 [Coxiella burnetii CbuK_Q154]
Length = 440
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 185/414 (44%), Positives = 260/414 (62%), Gaps = 8/414 (1%)
Query: 46 GFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIA 105
GFSV VR G ++ +E + +M++ +Y Q GN+ TSD +++ A +
Sbjct: 35 GFSVDVRLGDVETLEHHRKNSMDITVYHQQRT----GNACTSDLSLEAMERAFEKASAMT 90
Query: 106 RFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNEN 165
+FT D AGL D N + + D L PW ++ A +A CE A N + I +E
Sbjct: 91 QFTQEDPCAGLADANQMARDYPDLALSHPWNITPKQAISLAIECETLARNHDPRIKQSEG 150
Query: 166 TGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPE 225
++T + + NSHGF+ YP + H + IA + + MQRD+ Y+ DPKKL E
Sbjct: 151 ANLSTYRIFNIYGNSHGFLGYYPSTWHTLGCELIAEQDRFMQRDHDYTLARDPKKLSSIE 210
Query: 226 IIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSL 285
I A++TI RL A+++STR+CPV+F AP+A +L F ISG++LYR ++FL + L
Sbjct: 211 TIAIQTAEKTIRRLGARRLSTRQCPVIFNAPVARSVLRSFISAISGSNLYRGTSFLQNQL 270
Query: 286 GKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMK 345
++IF + I +DPH+ G GS+ FD GVKT+K V+NG++ Y L TYSAKKL M+
Sbjct: 271 HQQIFPEFVSIYQDPHLPGEIGSTPFDESGVKTRKVNFVENGVLTHYVLGTYSAKKLAME 330
Query: 346 TTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYW 405
TTGNSGG ++L I T NL +LK+M GLLVTELMG G+N ITG+YS+GAFG+W
Sbjct: 331 TTGNSGGVYNLFI----TTGDKNLTGLLKEMQCGLLVTELMGQGVNLITGNYSRGAFGFW 386
Query: 406 IENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IENG+IQY VEEITI+G L++MFKQI IG+D+ R + +GSILIE M +AG+
Sbjct: 387 IENGEIQYPVEEITIAGNLKDMFKQIQLIGNDIDPRGNIKTGSILIEQMTVAGE 440
>gi|390952310|ref|YP_006416069.1| microcin-processing peptidase 1 [Thiocystis violascens DSM 198]
gi|390428879|gb|AFL75944.1| microcin-processing peptidase 1 [Thiocystis violascens DSM 198]
Length = 449
Score = 357 bits (916), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 173/445 (38%), Positives = 272/445 (61%), Gaps = 10/445 (2%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ Q + +D+L AK+ GAS + G V VR G+++ +E D + + +Y
Sbjct: 14 ARLQTIIEDLLKEAKREGASAAEASVGSSAGLEVAVRLGEVETVEHTRDNGLGITVYFGH 73
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
K G+SSTSD ++ D + AA IA T D A L + + + + LY PW
Sbjct: 74 RK----GSSSTSDLSPGAVRDAVKAACAIATHTQEDRCAHLAEPELMATDFPELDLYHPW 129
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
+ +++A +A CE+ A +++ IVN+E ++TQ + N+ GFM GYP ++H +
Sbjct: 130 SIEVEEAIALAVACEDAARDYDPRIVNSEGASLSTQFGIHVAGNTQGFMGGYPTTRHSLD 189
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
+ I +G MQRD+W+++ L+ +G AA+RT++RL A+++ T++ PVLF A
Sbjct: 190 CAVIGQEGDLMQRDSWWTTARSALDLEPARQVGERAAERTVARLGARRLGTQESPVLFRA 249
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A LL ISG S+YR+S+FL+D LG++IF ++I E+PH+ S+ FD +
Sbjct: 250 DVATGLLRSLMSAISGGSIYRRSSFLLDHLGERIFPEFVRIHEEPHLPRGLASAPFDGDC 309
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLII-ISNKTKSSDNLKEMLK 374
V T+ + +V G++Q Y LS YS +LG+ TTGN+GG +L I + +K +++ ML+
Sbjct: 310 VATRAKDLVSGGVLQTYLLSVYSGCRLGLPTTGNAGGVRNLRIEMGDKDRAA-----MLR 364
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
++ TGL+VTELMG G+N +TGDYS+GA G+W+ENG+IQY VEEITI+G L+ MF +VA+
Sbjct: 365 ELGTGLMVTELMGHGVNAVTGDYSRGASGFWVENGEIQYPVEEITIAGNLKKMFAGLVAV 424
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
G+D S +GS LI+ M IAG+
Sbjct: 425 GNDCDFPGSTRTGSWLIDRMTIAGE 449
>gi|212212794|ref|YP_002303730.1| microcin-processing peptidase 1 [Coxiella burnetii CbuG_Q212]
gi|212011204|gb|ACJ18585.1| microcin-processing peptidase 1 [Coxiella burnetii CbuG_Q212]
Length = 440
Score = 357 bits (916), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 185/414 (44%), Positives = 260/414 (62%), Gaps = 8/414 (1%)
Query: 46 GFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIA 105
GFSV VR G ++ +E + +M++ +Y Q GN+ TSD +++ A +
Sbjct: 35 GFSVDVRLGDVETLEHHRKNSMDITVYHQQRT----GNACTSDLSLEAMERAFEKASAMT 90
Query: 106 RFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNEN 165
+FT D AGL D N + + D L PW ++ A +A CE A N + I +E
Sbjct: 91 QFTQEDPCAGLADANQMARDYPDLALSHPWNITPKQAISLAIECETLARNHDPRIKQSEG 150
Query: 166 TGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPE 225
++T + + NSHGF+ YP + H + IA + + MQRD+ Y+ DPKKL E
Sbjct: 151 ANLSTYRIFNIYGNSHGFLGYYPSTWHTLGCELIAEQDRFMQRDHDYTLARDPKKLSSIE 210
Query: 226 IIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSL 285
I A++TI RL A+++STR+CPV+F AP+A +L F ISG++LYR ++FL + L
Sbjct: 211 TIAIQTAEKTIRRLGARRLSTRQCPVIFNAPVARSVLRSFISAISGSNLYRGTSFLQNQL 270
Query: 286 GKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMK 345
++IF + I +DPH+ G GS+ FD GVKT+K V+NG++ Y L TYSAKKL M+
Sbjct: 271 HQQIFPEFVSIYQDPHLPGEIGSTPFDESGVKTRKINFVENGVLTHYVLGTYSAKKLAME 330
Query: 346 TTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYW 405
TTGNSGG ++L I T NL +LK+M GLLVTELMG G+N ITG+YS+GAFG+W
Sbjct: 331 TTGNSGGVYNLFI----TTGDKNLTGLLKEMQCGLLVTELMGQGVNLITGNYSRGAFGFW 386
Query: 406 IENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IENG+IQY VEEITI+G L++MFKQI IG+D+ R + +GSILIE M +AG+
Sbjct: 387 IENGEIQYPVEEITIAGNLKDMFKQIQLIGNDIDPRGNIKTGSILIEQMTVAGE 440
>gi|406943884|gb|EKD75779.1| hypothetical protein ACD_44C00029G0002 [uncultured bacterium]
Length = 447
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 185/455 (40%), Positives = 292/455 (64%), Gaps = 8/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+ + K S + + +A +L+++KK GA+ + + + G GF+ VR G+++ +E +
Sbjct: 1 MSTQEKTPLSFEKLKNIAHHILDFSKKQGATDAEVSISNGLGFTTQVRLGEVETLEYHRS 60
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
K + + +Y K G +S S + +L + ++AA +IA++T+ DN AGL ++ L
Sbjct: 61 KGIGITVYFGQKK----GTTSLSAIEETALNEAVSAACHIAKYTSEDNCAGLIEKKFLAF 116
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
N D KL+ PW ++ + +A EN ++ I N+E ++T ++HF+ ANS GF
Sbjct: 117 NYPDLKLFYPWSITPEQGIELAKEVENIGRAYDKRISNSEGATLSTHENHFVYANSIGFC 176
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S + ++ + IA + MQRD YS DP +L + I AA + + RL AKK+
Sbjct: 177 GHYSSSFYNLNCTLIANENDRMQRDYGYSIARDPLELFSAKEIAKEAATKVLRRLGAKKL 236
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
STRK PV+F + ++ L++ F I G++LYRKS+FL D L K +F SHIQI E+P I+
Sbjct: 237 STRKTPVIFSSNVSPALISHFLAAIRGSNLYRKSSFLCDYLEKPVFPSHIQIREEPFIIK 296
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EG + R ++ GI++ YFL++Y+A+KLGM+ TGN+GG H++++ +
Sbjct: 297 GLASAPFDDEGATPRPRDLIHQGILKSYFLNSYTARKLGMEPTGNAGGIHNILV----SH 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
S+D +E+LKKM+TGL++TELMG GIN + GDYS+GA G+W+E G+IQY VEEITI+G L
Sbjct: 353 SADTFEELLKKMDTGLVITELMGQGINLVNGDYSRGATGFWVEKGEIQYPVEEITIAGNL 412
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+NMF I+AIG+D+ R+S +GSILI+ M IAG+
Sbjct: 413 KNMFMGILAIGTDIEKRSSIQTGSILIDEMTIAGE 447
>gi|29654075|ref|NP_819767.1| TldD/PmbA family protein [Coxiella burnetii RSA 493]
gi|161829812|ref|YP_001596947.1| TldD/PmbA family protein [Coxiella burnetii RSA 331]
gi|29541341|gb|AAO90281.1| microcin-processing peptidase 1 [Coxiella burnetii RSA 493]
gi|161761679|gb|ABX77321.1| TldD/PmbA family protein [Coxiella burnetii RSA 331]
Length = 440
Score = 357 bits (915), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 185/414 (44%), Positives = 260/414 (62%), Gaps = 8/414 (1%)
Query: 46 GFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIA 105
GFSV VR G ++ +E + +M++ +Y Q GN+ TSD +++ A +
Sbjct: 35 GFSVDVRLGDVETLEHHRKNSMDITVYHQQRT----GNACTSDLSLEAMERAFEKASAMT 90
Query: 106 RFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNEN 165
+FT D AGL D N + + D L PW ++ A +A CE A N + I +E
Sbjct: 91 QFTQEDPCAGLADANQMARDYPDLVLSHPWNITPKQAISLAIECETLARNHDPRIKQSEG 150
Query: 166 TGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPE 225
++T + + NSHGF+ YP + H + IA + + MQRD+ Y+ DPKKL E
Sbjct: 151 ANLSTYRIFNIYGNSHGFLGYYPSTWHTLGCELIAEQDRFMQRDHDYTLARDPKKLSSIE 210
Query: 226 IIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSL 285
I A++TI RL A+++STR+CPV+F AP+A +L F ISG++LYR ++FL + L
Sbjct: 211 TIAIQTAEKTIRRLGARRLSTRQCPVIFNAPVARSVLRSFISAISGSNLYRGTSFLQNQL 270
Query: 286 GKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMK 345
++IF + I +DPH+ G GS+ FD GVKT+K V+NG++ Y L TYSAKKL M+
Sbjct: 271 HQQIFPEFVSIYQDPHLPGEIGSTPFDESGVKTRKINFVENGVLTHYVLGTYSAKKLAME 330
Query: 346 TTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYW 405
TTGNSGG ++L I T NL +LK+M GLLVTELMG G+N ITG+YS+GAFG+W
Sbjct: 331 TTGNSGGVYNLFI----TTGDKNLTGLLKEMQCGLLVTELMGQGVNLITGNYSRGAFGFW 386
Query: 406 IENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IENG+IQY VEEITI+G L++MFKQI IG+D+ R + +GSILIE M +AG+
Sbjct: 387 IENGEIQYPVEEITIAGNLKDMFKQIQLIGNDIDPRGNIKTGSILIEQMTVAGE 440
>gi|398876187|ref|ZP_10631346.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM67]
gi|398882958|ref|ZP_10637920.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM60]
gi|398197736|gb|EJM84709.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM60]
gi|398205118|gb|EJM91907.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM67]
Length = 448
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 180/441 (40%), Positives = 271/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D AGL D + + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAKHTSEDEAAGLADAALMAKDLQDFDLFHQWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A +A CE AF +S I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEMALSCEAAAFATDSRIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGNLLADPASIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG SLYRKS+FL +LG+K+F + I E PH++ + GSS+FD +G+
Sbjct: 251 AGGLFGSFLSAISGGSLYRKSSFLEGTLGQKLFPEWLTIDERPHLMRAMGSSAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TYS +KLGM +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVEKGELVSYILGTYSGRKLGMPSTANAGGVHNLFV----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGQGLNMVTGDYSRGAAGYWVENGEIQFAVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|442609594|ref|ZP_21024331.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
gi|441749066|emb|CCQ10393.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 449
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 177/443 (39%), Positives = 274/443 (61%), Gaps = 8/443 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E +Q +++L+YA+ +GA+ + + +G SV R G++D IE N D + + +Y+ +
Sbjct: 15 EVKQAVKEVLDYAQSLGATAAEAAMSSTSGLSVSTRLGEVDTIEFNQDGGLGISVYVGNH 74
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++ST+D K++L + A IA+FT+ D GL ++ + + D LY P
Sbjct: 75 K----GSASTADLSKEALRSVVKKAVEIAKFTSDDPCNGLAEKALMAFDYPDLDLYHPAN 130
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
+S D + E A + I+N++ + Q + NSHGF++GYP ++H +S
Sbjct: 131 VSPDTGIALCKAAEEAALAHDKRIINSDGATFASHQGLRVYGNSHGFLAGYPRTRHTLST 190
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
I +GK MQRD+ YS + +L P+ IG AA+ T+++L +K+ T+K PV+F A
Sbjct: 191 MVIGKEGKHMQRDSAYSVSRIYSELKAPQAIGIEAAESTVAKLNCQKVPTQKVPVIFRAD 250
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
+A L I G +LYRKS+FL+DSLGK +F+S + I E PH+ SS FD+EGV
Sbjct: 251 IANSLFGHLVSAIGGGALYRKSSFLLDSLGKPVFNSCVSISERPHLPKGLASSPFDSEGV 310
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T+++ ++ NG +Q Y L++Y+AKKL M+ TG++GG H+ ++ + L +LK M
Sbjct: 311 ITKEKEIIINGELQTYLLASYAAKKLKMQATGHAGGIHNWLV----QPTQGGLASLLKTM 366
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
TGLLVTELMG G+N +TGDYS+GA G+WIENG++Q+ V EITI+G L++MF + AIG
Sbjct: 367 GTGLLVTELMGQGVNTVTGDYSRGAAGFWIENGEVQFPVSEITIAGNLKDMFMNVAAIGD 426
Query: 437 DVLTRNSNTSGSILIENMIIAGK 459
D+ R S +GS+LI M IAG+
Sbjct: 427 DIEKRGSVQTGSVLISQMQIAGQ 449
>gi|387128285|ref|YP_006296890.1| TldE/PmbA protein [Methylophaga sp. JAM1]
gi|386275347|gb|AFI85245.1| TldE/PmbA protein [Methylophaga sp. JAM1]
Length = 441
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 174/429 (40%), Positives = 270/429 (62%), Gaps = 8/429 (1%)
Query: 30 KKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDF 89
KK+GA+ + + ++ G SV VR+G+I+ +E N D + V +++ K ++STSD
Sbjct: 21 KKLGATAAEVGISQSQGLSVNVRQGEIETLEHNKDTGLGVTVFLGQSK----ASASTSDL 76
Query: 90 CKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRC 149
+++++T+ A +IA+ T D FAGL D + + D LY PW LS + A +A C
Sbjct: 77 RPEAIHETVAMACSIAQHTQEDKFAGLADAELMATSFPDLHLYYPWDLSPEQAIALAMEC 136
Query: 150 ENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRD 209
E ++ LI N+E V + + + ANSHGF+ S+H + + IA MQRD
Sbjct: 137 EQAGREYDPLISNSEGASVASHEDQRIYANSHGFIGQTQSSRHSLFCTLIARDEAGMQRD 196
Query: 210 NWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLI 269
WY D + L +G AA++T+ RL A++I T PV+F A +A L I
Sbjct: 197 YWYDVARDSQDLVSAVSVGRKAAEKTLKRLNAREIETGHYPVIFAAEVASSLFGQLVGGI 256
Query: 270 SGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGII 329
G++LYRKS+FL+D LG++IF + + I E PH+ + GSS+FD EGV TQ R ++++G++
Sbjct: 257 RGSALYRKSSFLLDKLGEQIFPAFMHIHEQPHLFKALGSSAFDAEGVATQNRDIIRDGVL 316
Query: 330 QGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDG 389
QGY L +YSA++L M TT N+GG H+L + SN + ++MLK M+ G++VTE MG G
Sbjct: 317 QGYVLDSYSARRLNMTTTANAGGIHNLTVDSNDL----SFQDMLKAMDRGVIVTETMGMG 372
Query: 390 INYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSI 449
+N + GDYS+GA G+W+ENG+IQY+++E TI+G+LQ+MFK I A+ +DV R++ SGS+
Sbjct: 373 VNIVNGDYSQGAAGFWVENGEIQYAIDEFTIAGQLQDMFKGIQAVANDVDLRSNIRSGSV 432
Query: 450 LIENMIIAG 458
I+ M++A
Sbjct: 433 WIDKMMVAA 441
>gi|88861170|ref|ZP_01135804.1| putative enzyme for maturation of Microcin B17 and degradation of
CcdA [Pseudoalteromonas tunicata D2]
gi|88816892|gb|EAR26713.1| putative enzyme for maturation of Microcin B17 and degradation of
CcdA [Pseudoalteromonas tunicata D2]
Length = 449
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 178/453 (39%), Positives = 280/453 (61%), Gaps = 9/453 (1%)
Query: 7 NRSKFIYSK-SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDK 65
R +Y + +E +Q + L AK +GA+ + + +G SV R G+++ IE N D
Sbjct: 4 QREDTVYQQIAEIKQAVEQALEQAKALGATAAEAAMSSTSGLSVTTRLGEVETIEFNQDG 63
Query: 66 NMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMN 125
+ + +Y+ + K G++ST+D ++L + A IA++T+ D GL D++ LE+N
Sbjct: 64 ALGISVYVGNKK----GSASTADLSPEALKSVVAKAIEIAKYTSEDPCNGLADKDLLELN 119
Query: 126 PLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMS 185
P D LY PW +S + + + E A F+ IVN++ ++ Q + NSHGF++
Sbjct: 120 PPDLDLYHPWDVSPEHGIELCQQAEEAAMGFDKRIVNSDGASFSSHQGIRIYGNSHGFIA 179
Query: 186 GYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
G+P ++H IS I G++M+RD+ Y+ + L + +G AA T+++L ++KI+
Sbjct: 180 GFPRTRHSISCMVIGQDGEQMERDSAYTLSRLQSGLKCAKSVGIEAASETLAKLNSRKIA 239
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
T K PV+F A +A L I G +LYRKS+FL+DSLG +IFS + ++E PHIL
Sbjct: 240 TGKYPVVFRADIANSLFGHLVSAIGGGALYRKSSFLLDSLGTQIFSDVVNVVERPHILQG 299
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
S+ FD+EGV+TQ R +++NG+++ Y L TY+++++ M TG++GG H+ +I + +
Sbjct: 300 LASTPFDSEGVRTQDRTIIENGVLETYLLGTYASRQMKMTATGHAGGIHNWLI----SAT 355
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
+L +L M TGLLVTELMG G+N + GDYS+GA G+W+ENG+IQY V EITI+G L+
Sbjct: 356 EPDLAALLNTMGTGLLVTELMGQGVNTVNGDYSRGAAGFWVENGQIQYPVSEITIAGNLK 415
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
MFK IVA+G D R S +GSIL+ M +AG
Sbjct: 416 EMFKDIVALGGDFDLRGSVNTGSILLSKMQVAG 448
>gi|345871561|ref|ZP_08823505.1| peptidase U62 modulator of DNA gyrase [Thiorhodococcus drewsii AZ1]
gi|343920219|gb|EGV30955.1| peptidase U62 modulator of DNA gyrase [Thiorhodococcus drewsii AZ1]
Length = 449
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 178/444 (40%), Positives = 270/444 (60%), Gaps = 8/444 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ Q++ +DML AK+ GAS + G V VR G+++ +E D ++V +Y
Sbjct: 14 TRLQEIIEDMLKEAKRQGASDAEASVGSSAGLEVAVRLGEVETVEHTRDNGLSVTVYFGH 73
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
K G++STSD ++ D ++AA IA T D A L + + D LY PW
Sbjct: 74 SK----GSASTSDLSPGAIRDAVSAACAIAAHTQEDRCAHLAEAELMATEVPDLDLYHPW 129
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
+ +D+A +A CE+ A +++ IVN+E ++T + NS GF+ GYP ++H ++
Sbjct: 130 SIGVDEAIELAVSCEDAARAYDTRIVNSEGASLSTHFGIHIAGNSRGFIGGYPTTRHGLN 189
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
+ I G MQRD W+++ LD +G AA RT++RL +++ TR+ PV+F A
Sbjct: 190 CAVIGQDGDAMQRDFWWTTARCAADLDTARSVGERAAARTVARLGGRRLDTREAPVMFRA 249
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A LL ISG+S+YR+S+FL+D LG++IF ++I E+PH+ S+ FD +G
Sbjct: 250 EVATGLLRSLLGAISGSSIYRRSSFLLDRLGERIFPEFVRIHEEPHLRRGLSSAPFDGDG 309
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V T+ + +V++GI+Q Y L TYS +LGM TTGN+GG +L I + + ML++
Sbjct: 310 VATRAKDLVRDGILQTYVLDTYSGCRLGMPTTGNAGGVRNLRIEMGELDRAG----MLRE 365
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY VEEITI+G L++MF +VA+G
Sbjct: 366 MGTGLLVTELMGHGVNNVTGDYSRGASGFWVENGEIQYPVEEITIAGNLKDMFAGLVAVG 425
Query: 436 SDVLTRNSNTSGSILIENMIIAGK 459
+D +GS LI+ M IAG+
Sbjct: 426 NDCDFPGGTRTGSWLIDRMTIAGE 449
>gi|392552624|ref|ZP_10299761.1| hypothetical protein PspoU_15288 [Pseudoalteromonas spongiae
UST010723-006]
Length = 449
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 180/443 (40%), Positives = 276/443 (62%), Gaps = 8/443 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E +Q + L+YAK++GAS + + +G SV R G+++ IE N D + + +Y+ +
Sbjct: 15 EVKQAVSEALDYAKQLGASSAEAAMSSTSGLSVSTRLGELETIEYNQDGALGISVYVGNK 74
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++ST+D ++L ++ A IA++T+ D G+ D+ L+ P D LY PW
Sbjct: 75 K----GSASTADLSPEALKTVVSKAVEIAKYTSEDPCNGIADKELLDFAPQDLDLYHPWQ 130
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + + + E A F+S I N++ ++ + NS+G + G+P S+H IS
Sbjct: 131 VTAEQGIDLCKQAEAAAMQFDSRISNSDGASFSSHNGLRVYGNSYGQLVGFPRSRHSISC 190
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
I + MQRD+ Y+ + L E +G AA+ TI+RL ++I T K PV+F A
Sbjct: 191 MVIGEENGMMQRDSAYTIARKQEGLSSAESVGIEAAEETIARLNCRRIPTGKYPVVFRAD 250
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
+A L I G +LYRKS+FL+DSLG ++FS + I E PHILG SS+ D+EGV
Sbjct: 251 IASSLFGHLVSAIGGGALYRKSSFLLDSLGSQVFSDKVNIQERPHILGGLASSAVDSEGV 310
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
KT R ++K G +Q Y L++Y+++KLGM+ TG++GG H+ ++ S +LK +L +M
Sbjct: 311 KTIDREIIKGGELQTYLLASYASRKLGMQATGHAGGIHNWLV----EASHQDLKNVLNEM 366
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
TGLLVTE+MG G+N +TGDYS+GA G+W+ENG+IQY V E+TI+G L++MF ++ AIG
Sbjct: 367 GTGLLVTEVMGQGVNIVTGDYSRGAAGFWVENGEIQYPVSEVTIAGNLKDMFLKVAAIGG 426
Query: 437 DVLTRNSNTSGSILIENMIIAGK 459
DV R S +GSILIE+M IAG+
Sbjct: 427 DVDVRGSIQTGSILIESMSIAGE 449
>gi|397667498|ref|YP_006509035.1| peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Legionella pneumophila subsp.
pneumophila]
gi|395130909|emb|CCD09158.1| peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Legionella pneumophila subsp.
pneumophila]
Length = 452
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 183/453 (40%), Positives = 285/453 (62%), Gaps = 8/453 (1%)
Query: 7 NRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
N S+ S ++ ++ +D+L AKK GA+ +++ N GFSV VR G+++ + + DK
Sbjct: 8 NNSEVYKSTTDLNRVIKDVLELAKKEGATDAAVAVNYDRGFSVDVRMGEVETVAFSEDKG 67
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +YI K G +S++D ++L + AA IA+ +A D GL D+ + N
Sbjct: 68 VGLTVYIGQRK----GGASSTDTSPEALQSLVKAACEIAKVSAEDPCFGLADKELMTKNH 123
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D LY W ++ A +A +CE+ A + + I N++ V++ +SH AN+HG
Sbjct: 124 PDLDLYHSWDITPQQAIDLALKCESHALSLDKRITNSDGVNVSSYESHHGYANTHGGEGF 183
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
++H IS S IA +G EMQRD Y++ + + L ++I A +R +SRL +K+I T
Sbjct: 184 IHSTRHSISCSVIAKEGDEMQRDYDYTTARNAENLVSADLIAAKAVERALSRLGSKQIKT 243
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
+ PV+F + ++ LL F ISG++LYRK++FL+DS+G+++F + I E PH+ G+
Sbjct: 244 QMTPVIFSSRVSSGLLGSFVSAISGSNLYRKNSFLLDSIGQQLFPEFVHIYEQPHLKGAL 303
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
GS+ FD EGV T+ ++V+ G + Y L +YSA+K+G+KTT NS G H+L I +
Sbjct: 304 GSAPFDGEGVPTRPNVLVEKGRLLQYVLGSYSARKMGLKTTANSDGVHNLTI----DPTC 359
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+L ++LK M GLLVTELMG G+N ITGDYS+GA GYW+E+G IQY V++ITI+G L+
Sbjct: 360 GDLGDLLKMMRKGLLVTELMGQGVNGITGDYSRGASGYWVEDGVIQYPVDQITIAGNLKE 419
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ I+A+GSD+ S GSILIENM++AGK
Sbjct: 420 MYRMILAVGSDINPNISMRCGSILIENMMVAGK 452
>gi|397664225|ref|YP_006505763.1| peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Legionella pneumophila subsp.
pneumophila]
gi|395127636|emb|CCD05835.1| peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Legionella pneumophila subsp.
pneumophila]
Length = 452
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 183/453 (40%), Positives = 285/453 (62%), Gaps = 8/453 (1%)
Query: 7 NRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
N S+ S ++ ++ +D+L AKK GA+ +++ N GFSV VR G+++ + + DK
Sbjct: 8 NNSEVYKSTTDLNRVIKDVLELAKKEGATDAAVAVNYDRGFSVDVRMGEVETVAFSEDKG 67
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +YI K G +S++D ++L + AA IA+ +A D GL D+ + N
Sbjct: 68 VGLTVYIGQRK----GGASSTDTSPEALQSLVKAACEIAKVSAEDPCFGLADKELMTKNH 123
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D LY W ++ A +A +CE+ A + + I N++ V++ +SH AN+HG
Sbjct: 124 PDLDLYHSWDITPQQAIDLALKCESHALSLDKRITNSDGVNVSSYESHHGYANTHGGEGF 183
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
++H +S S IA +G EMQRD Y++ + + L ++I A +R +SRL +K+I T
Sbjct: 184 IHSTRHSVSCSVIAKEGDEMQRDYDYTTARNAENLVSADLIAAKAVERALSRLGSKQIKT 243
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
+ PV+F + ++ LL F ISG++LYRK++FL+DS+G+++F + I E PH+ G+
Sbjct: 244 QMTPVIFSSRVSSGLLGSFVSAISGSNLYRKNSFLLDSIGQQLFPEFVHIYEQPHLKGAL 303
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
GS+ FD EGV T+ ++V+ G + Y L +YSA+K+G+KTT NS G H+L I +
Sbjct: 304 GSAPFDGEGVPTRPNVLVEKGRLLQYVLGSYSARKMGLKTTANSDGVHNLTI----DPTC 359
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+L ++LK M GLLVTELMG G+N ITGDYS+GA GYW+E+G IQY V++ITI+G L+
Sbjct: 360 GDLGDLLKMMRKGLLVTELMGQGVNGITGDYSRGASGYWVEDGVIQYPVDQITIAGNLKE 419
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ I+AIGSD+ S GSILIENM++AGK
Sbjct: 420 MYRMILAIGSDINPNISMRCGSILIENMMVAGK 452
>gi|407366432|ref|ZP_11112964.1| microcin-processing peptidase 1 [Pseudomonas mandelii JR-1]
Length = 448
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 179/441 (40%), Positives = 270/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D + + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAKHTSEDEASGLADAALMARDLQDFDLFHEWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF +S I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEQALTCEAAAFAADSRIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGNLLADPVSIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG SLYRKS+FL +LG+K+F + I E PH++ + GSS+FD +G+
Sbjct: 251 AGGLFGSFLSAISGGSLYRKSSFLEGTLGQKLFPEWLTIDERPHLMRAMGSSAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TYS +KLGM +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVEKGELVSYILGTYSGRKLGMPSTANAGGVHNLFV----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGQGLNMVTGDYSRGAAGYWVENGEIQFAVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|336317047|ref|ZP_08571925.1| Putative Zn-dependent protease-like protein [Rheinheimera sp. A13L]
gi|335878699|gb|EGM76620.1| Putative Zn-dependent protease-like protein [Rheinheimera sp. A13L]
Length = 448
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/443 (40%), Positives = 264/443 (59%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+E + +L +AK++GAS + N G SV R G+++ +E N D + + IY+
Sbjct: 13 AEVKDAVSQVLAHAKQLGASSAEASMNRTRGLSVETRHGEVETVEFNQDGGLGISIYVGQ 72
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
K G++ST+D +L T+ AA +IAR+T+ D AGL D + LE++P D L+ P
Sbjct: 73 RK----GSASTADLSPAALKRTVEAAIDIARYTSEDPHAGLADASWLELSPPDLDLFHPA 128
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
+S + A E AF +++ I N+E ++ Q + NSHG + GYP S+H +S
Sbjct: 129 SVSTEQAIEWCKASEEAAFAYDARITNSEGASFSSHQGLKVYGNSHGQLVGYPSSRHSLS 188
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I G +MQRD Y+ + L P IG AA T+ RL +K+ T+K PV+F A
Sbjct: 189 CVVIGEDGDDMQRDYSYTVARELGALLDPAQIGREAALETVQRLNGRKLGTQKVPVIFRA 248
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A + ISG S+YRKS+FL+D +G+ + S + IIE PH+ + SS FD EG
Sbjct: 249 DIASSIFGHLVSAISGGSIYRKSSFLLDKVGQPVMSDKVTIIERPHLKQALASSPFDGEG 308
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
VKT+ V+ NG++ Y ++YS +KLG+ +TG++GG H+ ++ + +L ++ +
Sbjct: 309 VKTRDLTVLDNGVLNTYLTTSYSGRKLGLPSTGHAGGIHNWLVQHGEA----DLAQLCRD 364
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M GLLVTELMG G+N +TGDYS+GA G+WIENG+IQ+ V EITI+G LQ MF I AIG
Sbjct: 365 MGRGLLVTELMGQGVNTVTGDYSRGAAGFWIENGQIQFPVSEITIAGTLQQMFMDIQAIG 424
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
DV R +GS+LI M IAG
Sbjct: 425 KDVDPRGGVLTGSVLIGQMQIAG 447
>gi|54294658|ref|YP_127073.1| hypothetical protein lpl1735 [Legionella pneumophila str. Lens]
gi|53754490|emb|CAH15974.1| hypothetical protein lpl1735 [Legionella pneumophila str. Lens]
Length = 452
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/453 (40%), Positives = 287/453 (63%), Gaps = 8/453 (1%)
Query: 7 NRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
N S+ S ++ ++ +D+L AKK GA+ +++ N GFSV VR G+++ + + DK
Sbjct: 8 NNSEVYKSTTDLNRVIKDVLELAKKEGATDAAVAVNYDRGFSVDVRMGEVETVAFSEDKG 67
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +YI G++ G +S++D ++L + AA IA+ +A D GL D+ + N
Sbjct: 68 VGLTVYI--GRRK--GGASSTDTSLEALQSLVKAACEIAKVSAEDPCFGLADKELMTKNH 123
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D LY W ++ A +A +CE+ A + + I N++ V++ +SH AN+HG
Sbjct: 124 PDLDLYHSWDITPQQAIDLALKCESHALSLDKRITNSDGVNVSSYESHHGYANTHGGEGF 183
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
++H +S S IA +G EMQRD Y++ + + L ++I A +R +SRL +K+I T
Sbjct: 184 IHSTRHSVSCSVIAKEGDEMQRDYDYTTARNAENLVSADLIAAKAVERALSRLGSKQIKT 243
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
+ PV+F + ++ LL F ISG++LYRK++FL+DS+G+++F + I E PH+ G+
Sbjct: 244 QMTPVIFSSRVSSGLLGSFVSAISGSNLYRKNSFLLDSIGQQLFPEFVHIYEQPHLKGAL 303
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
GS+ FD EGV T+ ++V+ G + Y L +YSA+K+G+KTT NS G H+L I +
Sbjct: 304 GSAPFDGEGVPTRPNVLVEKGRLLQYVLGSYSARKMGLKTTANSDGVHNLTI----DPTC 359
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+L ++LK M GLLVTELMG G+N ITGDYS+GA GYW+E+G IQY V++ITI+G L+
Sbjct: 360 GDLGDLLKMMRNGLLVTELMGQGVNGITGDYSRGASGYWVEDGVIQYPVDQITIAGNLKE 419
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ I+AIGSD+ S GSILIENM++AGK
Sbjct: 420 MYRMILAIGSDINPNISMRCGSILIENMMVAGK 452
>gi|330807544|ref|YP_004352006.1| protein tldE, (protein pmbA) [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375652|gb|AEA67002.1| protein tldE, (protein pmbA) [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 452
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/441 (40%), Positives = 269/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + +L AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 19 LQEQVEQILAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 78
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D + DF L+ W +
Sbjct: 79 ----GSASTSASGPEAIRETVAAALAIAQHTSEDEASGLADAALMCKELRDFDLFHAWDI 134
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A RCE AF +S I N + T + T Q + NSHGF+ GY ++H +S
Sbjct: 135 TPEQAIEQALRCEAAAFEADSRIKNADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSCV 194
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 195 MIAEANGQMQRDYWYDVNRQGTLLADPVSIGQKAAQRAASRLGARPVPTCEVPVLFSAEL 254
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F +SG +LYRKS+FL +LG+K+F + I E PH++ + GSS+FD +G+
Sbjct: 255 AGGLFGSFLSAVSGGNLYRKSSFLEGALGQKLFPEWMTIDERPHLMQAMGSSAFDGDGLA 314
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y L TYS +KLGM +T N+GG H+L + T ++ +L++M
Sbjct: 315 TYAKPFVENGELVSYILGTYSGRKLGMPSTANAGGVHNLFV----THGEEDQAALLRRMG 370
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+G+D
Sbjct: 371 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGND 430
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 431 LELRSNIRTGSVLIERMTVAG 451
>gi|395798217|ref|ZP_10477502.1| putative modulation of DNA gyrase-like protein [Pseudomonas sp.
Ag1]
gi|421142179|ref|ZP_15602155.1| Peptidase U62, modulator of DNA gyrase [Pseudomonas fluorescens
BBc6R8]
gi|395337406|gb|EJF69262.1| putative modulation of DNA gyrase-like protein [Pseudomonas sp.
Ag1]
gi|404506573|gb|EKA20567.1| Peptidase U62, modulator of DNA gyrase [Pseudomonas fluorescens
BBc6R8]
Length = 448
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 178/441 (40%), Positives = 274/441 (62%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D + + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAKHTSEDESSGLADAALMARDLKDFDLFHAWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF+ +S I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEQALTCEAAAFDADSRIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N + L P +IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEANGQMQRDYWYDVNRQGELLMDPVLIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL ++G+K+F + I E PH++ + GSSSFD +G+
Sbjct: 251 AGGLFGSFLGAISGGNLYRKSSFLEGAIGQKLFPEWLTIDERPHLMRAMGSSSFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y L TY+ +KLG+ +T NSGG H+L I T ++ +L++M
Sbjct: 311 TYAKPFVENGELVSYVLGTYAGRKLGLPSTANSGGVHNLFI----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIEKMTVAG 447
>gi|423695359|ref|ZP_17669849.1| PmbA protein [Pseudomonas fluorescens Q8r1-96]
gi|388009120|gb|EIK70371.1| PmbA protein [Pseudomonas fluorescens Q8r1-96]
Length = 448
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 179/441 (40%), Positives = 269/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + +L AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQILAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAQHTSEDEASGLADAALMCKELRDFDLFHAWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A RCE AF +S I N + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEQALRCEAAAFEADSRIKNADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEANGQMQRDYWYDVNRQGTLLADPVSIGQKAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F +SG +LYRKS+FL +LG+K+F + I E PH++ + GSS+FD +G+
Sbjct: 251 AGGLFGSFLSAVSGGNLYRKSSFLEGALGQKLFPEWMTIDERPHLMQAMGSSAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y L TYS +KLGM +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVENGELVSYILGTYSGRKLGMPSTANAGGVHNLFV----THGEEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|148359315|ref|YP_001250522.1| peptide maturation protein PmbA [Legionella pneumophila str. Corby]
gi|296107362|ref|YP_003619062.1| peptide maturation protein [Legionella pneumophila 2300/99 Alcoy]
gi|148281088|gb|ABQ55176.1| peptide maturation protein PmbA [Legionella pneumophila str. Corby]
gi|295649263|gb|ADG25110.1| peptide maturation protein [Legionella pneumophila 2300/99 Alcoy]
gi|307610471|emb|CBX00042.1| hypothetical protein LPW_17981 [Legionella pneumophila 130b]
Length = 452
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 181/453 (39%), Positives = 285/453 (62%), Gaps = 8/453 (1%)
Query: 7 NRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
N S+ S ++ ++ +D+L AKK GA+ +++ N GFSV VR G+++ + + DK
Sbjct: 8 NNSEVYKSTTDLNRVIKDVLELAKKEGATDAAVAVNYDRGFSVDVRMGEVETVAFSEDKG 67
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +YI K G +S++D ++L + AA IA+ +A D GL D+ + N
Sbjct: 68 VGLTVYIGQRK----GGASSTDTSPEALQSLVKAACEIAKVSAEDPCFGLADKELMTKNH 123
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D LY W ++ A +A +CE+ A + + I N++ V++ +SH AN+HG
Sbjct: 124 PDLDLYHSWDITPQHAIDLALKCESHALSLDKRITNSDGVNVSSYESHHGYANTHGGEGF 183
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
++H +S S IA +G EMQRD Y++ + + L ++I A +R +SRL +K+I T
Sbjct: 184 IHSTRHSVSCSVIAKEGDEMQRDYDYTTARNAENLVSADLIAAKAVERALSRLGSKQIKT 243
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
+ PV+F + ++ LL F ISG++LYRK++FL+DS+G+++F + I E PH+ G+
Sbjct: 244 QMTPVIFSSRVSSGLLGSFVSAISGSNLYRKNSFLLDSIGQQLFPEFVHIYEQPHLKGAL 303
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
GS+ FD EGV T+ ++V+ G + Y L +YSA+K+G++TT NS G H+L I +
Sbjct: 304 GSAPFDGEGVPTRPNVLVEKGRLLQYVLGSYSARKMGLRTTANSDGVHNLTI----DPTC 359
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+L ++LK M GLLVTELMG G+N ITGDYS+GA GYW+E+G IQY V++ITI+G L+
Sbjct: 360 GDLGDLLKMMRKGLLVTELMGQGVNGITGDYSRGASGYWVEDGVIQYPVDQITIAGNLKE 419
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ I+A+GSD+ S GSILIENM++AGK
Sbjct: 420 MYRMILAVGSDINPNISMRCGSILIENMMVAGK 452
>gi|410090490|ref|ZP_11287084.1| pmbA protein [Pseudomonas viridiflava UASWS0038]
gi|409762214|gb|EKN47239.1| pmbA protein [Pseudomonas viridiflava UASWS0038]
Length = 448
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 178/442 (40%), Positives = 272/442 (61%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+
Sbjct: 14 ELQEQVEQIIAEARRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++ +T+ AA IA T+ D +GL D + + DF LY W
Sbjct: 74 K----GSASTSATGADAIRETVAAALAIAEHTSEDESSGLADAALMARDIQDFDLYHAWD 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + + A CE AF+ + I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 130 ITPEQSIEKALLCEAAAFDADPRIKNADGTTLNTHQGCRVYGNSNGFIGGYASTRHSLSC 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L E IG AA+R SRL A+ + T + PVLF A
Sbjct: 190 VMIAEGEGQMQRDYWYDVNRQGQLLADAESIGRKAAQRAASRLGARPVPTCEVPVLFSAE 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L ISG +LYRKS+FL DSLG+++F + I E PH++G+ GSS+FD++G+
Sbjct: 250 LAGGLFGSLLGAISGGTLYRKSSFLQDSLGQRLFPEWMTIDERPHLMGAMGSSAFDSDGL 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+ G + Y LSTYS +KLGM +T N+GG H+L + T +++ ++++M
Sbjct: 310 ATYAKPFVEKGDLVSYILSTYSGRKLGMPSTANAGGVHNLFV----THGTEDQDALIRRM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GS
Sbjct: 366 GRGLLVTELMGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGS 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
DV R++ +GS+LIE M +AG
Sbjct: 426 DVELRSNIRTGSVLIERMTVAG 447
>gi|52841998|ref|YP_095797.1| peptide maturation protein PmbA [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378777632|ref|YP_005186070.1| peptide maturation protein PmbA [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|52629109|gb|AAU27850.1| peptide maturation protein PmbA [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364508447|gb|AEW51971.1| peptide maturation protein PmbA [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 471
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 181/453 (39%), Positives = 285/453 (62%), Gaps = 8/453 (1%)
Query: 7 NRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
N S+ S ++ ++ +D+L AKK GA+ +++ N GFSV VR G+++ + + DK
Sbjct: 27 NNSEVYKSTTDLNRVIKDVLELAKKEGATDAAVAVNYDRGFSVDVRMGEVETVAFSEDKG 86
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +YI K G +S++D ++L + AA IA+ +A D GL D+ + N
Sbjct: 87 VGLTVYIGQRK----GGASSTDTSPEALQSLVKAACEIAKVSAEDPCFGLADKELMTKNH 142
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D LY W ++ A +A +CE+ A + + I N++ V++ +SH AN+HG
Sbjct: 143 PDLDLYHSWDITPQHAIDLALKCESHALSLDKRITNSDGVNVSSYESHHGYANTHGGEGF 202
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
++H +S S IA +G EMQRD Y++ + + L ++I A +R +SRL +K+I T
Sbjct: 203 IHSTRHSVSCSVIAKEGDEMQRDYDYTTARNAENLVSADLIAAKAVERALSRLGSKQIKT 262
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
+ PV+F + ++ LL F ISG++LYRK++FL+DS+G+++F + I E PH+ G+
Sbjct: 263 QMTPVIFSSRVSSGLLGSFVSAISGSNLYRKNSFLLDSIGQQLFPEFVHIYEQPHLKGAL 322
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
GS+ FD EGV T+ ++V+ G + Y L +YSA+K+G++TT NS G H+L I +
Sbjct: 323 GSAPFDGEGVPTRPNVLVEKGRLLQYVLGSYSARKMGLRTTANSDGVHNLTI----DPTC 378
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+L ++LK M GLLVTELMG G+N ITGDYS+GA GYW+E+G IQY V++ITI+G L+
Sbjct: 379 GDLGDLLKMMRKGLLVTELMGQGVNGITGDYSRGASGYWVEDGVIQYPVDQITIAGNLKE 438
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ I+A+GSD+ S GSILIENM++AGK
Sbjct: 439 MYRMILAVGSDINPNISMRCGSILIENMMVAGK 471
>gi|388456661|ref|ZP_10138956.1| hypothetical protein FdumT_08812 [Fluoribacter dumoffii Tex-KL]
Length = 452
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 181/453 (39%), Positives = 289/453 (63%), Gaps = 8/453 (1%)
Query: 7 NRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
N S+ S ++ QL D+L AKK GA+ + + N GFSV VR G+++ + + DK
Sbjct: 8 NNSEVHKSTTDLTQLMNDVLQLAKKEGATDAMVAVNNDKGFSVDVRMGEVETVAFSEDKG 67
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +YI K G +S++D +L + AA +IAR +A D GL D+ + N
Sbjct: 68 VGLTVYIGQRK----GGASSTDTSPAALEAMVKAACDIARVSAEDPCFGLADKELMSPNH 123
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D L+ W ++ A +A CE A + + I+N++ V++ +SH AN++G
Sbjct: 124 PDLDLFHLWDINPQQAIEMALDCEKYALSLDKRIINSDGVNVSSYESHHGFANTNGGSGF 183
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
++H +S S IA G+EMQRD Y++ +P++L +I A +R +SRL A++I+T
Sbjct: 184 IHSTRHGLSCSLIAKDGEEMQRDYDYTTARNPRELIDFHVIAKNAVERAVSRLGAQQIAT 243
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
++ V+F + ++ L + F ISG++LYR++TFL+DS+G+++F I++ E PH+LG+
Sbjct: 244 QETAVIFSSRISSGLFSSFINAISGSNLYRRNTFLLDSIGQQVFPEFIRVYEQPHLLGAL 303
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
GSS FD+EGV T+ ++V+ G + Y L +YSA+++G+KTT N+ G H+L I ++
Sbjct: 304 GSSPFDSEGVPTRANILVEKGRVMQYVLGSYSARRMGLKTTANADGVHNLTI----EPTA 359
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+L ++LK ++ GLLVTELMG GIN +TGDYS+GA GYW+E GKIQY V+EITI+G L++
Sbjct: 360 GDLADLLKGIDKGLLVTELMGQGINGVTGDYSRGASGYWVEGGKIQYPVDEITIAGNLKD 419
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
MFK I+A+G+D+ + GS+LIE M++AGK
Sbjct: 420 MFKGILAVGNDINPNIATRCGSVLIEKMMVAGK 452
>gi|398948220|ref|ZP_10672634.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM33]
gi|398160874|gb|EJM49125.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM33]
Length = 448
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 177/441 (40%), Positives = 270/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEARRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D + + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAKHTSEDEASGLADAALMARDLQDFDLFHQWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF +S I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEQALTCEAAAFAADSRIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGNLLADPVSIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG SLYRKS+FL +LG+K+F + I E PH++ + GS++FD +G+
Sbjct: 251 AGGLFGSFLSAISGGSLYRKSSFLEGTLGQKLFPEWLTIDERPHLMRAMGSAAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TYS +KLGM +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVEKGELVSYILGTYSGRKLGMPSTANAGGVHNLFV----THGEEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGQGLNMVTGDYSRGAAGYWVENGEIQFAVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|312958987|ref|ZP_07773506.1| peptidase U62, modulator of DNA gyrase [Pseudomonas fluorescens
WH6]
gi|311286757|gb|EFQ65319.1| peptidase U62, modulator of DNA gyrase [Pseudomonas fluorescens
WH6]
Length = 448
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 177/441 (40%), Positives = 274/441 (62%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + +L AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQILAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D+ + + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAKHTSEDESSGLADKALMARDLKDFDLFHAWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF+ +S I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEQALTCEAAAFDADSRIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N + L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEANGQMQRDYWYDVNRQGELLADPVSIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL ++G+K+F + I E PH++ + GSS+FD +G+
Sbjct: 251 AGGLFGSFLGAISGGNLYRKSSFLEGAIGQKLFPEWLTIDERPHLMRAMGSSAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y L TY+ +KLG+ +T NSGG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVENGELVSYVLGTYAGRKLGLPSTANSGGVHNLFV----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|54297684|ref|YP_124053.1| hypothetical protein lpp1735 [Legionella pneumophila str. Paris]
gi|53751469|emb|CAH12887.1| hypothetical protein lpp1735 [Legionella pneumophila str. Paris]
Length = 452
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 182/453 (40%), Positives = 285/453 (62%), Gaps = 8/453 (1%)
Query: 7 NRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
N S+ S ++ ++ +D+L AKK GA+ +++ N GFSV VR G+++ + + DK
Sbjct: 8 NNSEVYKSTTDLNRVIKDVLELAKKEGATDAAVAVNYDRGFSVDVRMGEVETVAFSEDKG 67
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +YI K G +S++D ++L + AA IA+ +A + GL D+ + N
Sbjct: 68 VGLTVYIGQRK----GGASSTDTSPEALQSLVKAACEIAKVSAEEPCFGLADKELMTKNH 123
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D LY W ++ A +A +CE+ A + + I N++ V++ +SH AN+HG
Sbjct: 124 PDLDLYHSWDITPQQAIDLALKCESHALSLDKRITNSDGVNVSSYESHHGYANTHGGEGF 183
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
++H IS S IA +G EMQRD Y++ + + L ++I A +R +SRL +K+I T
Sbjct: 184 IHSTRHSISCSVIAKEGDEMQRDYDYTTARNAENLVSADLIAAKAVERALSRLGSKQIKT 243
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
+ PV+F + ++ LL F ISG++LYRK++FL+DS+G+++F + I E PH+ G+
Sbjct: 244 QMTPVIFSSRVSSGLLGSFVSAISGSNLYRKNSFLLDSIGQQLFPEFVHIYEQPHLKGAL 303
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
GS+ FD EGV T+ ++V+ G + Y L +YSA+K+G+KTT NS G H+L I +
Sbjct: 304 GSAPFDGEGVPTRPNVLVEKGRLLQYVLGSYSARKMGLKTTANSDGVHNLTI----DPTC 359
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+L ++LK M GLLVTELMG G+N ITGDYS+GA GYW+E+G IQY V++ITI+G L+
Sbjct: 360 GDLGDLLKMMRKGLLVTELMGQGVNGITGDYSRGASGYWVEDGVIQYPVDQITIAGNLKE 419
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ I+A+GSD+ S GSILIENM++AGK
Sbjct: 420 MYRMILAVGSDINPNISMRCGSILIENMMVAGK 452
>gi|423093546|ref|ZP_17081342.1| PmbA protein [Pseudomonas fluorescens Q2-87]
gi|397889047|gb|EJL05530.1| PmbA protein [Pseudomonas fluorescens Q2-87]
Length = 448
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 178/441 (40%), Positives = 268/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + +L AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQILAQAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS ++ +T+ AA IA+ T+ D +GL D + DF L+ W +
Sbjct: 75 ----GSASTSASGPDAIRETVAAALAIAKHTSEDEASGLADAALMCKELRDFDLFHAWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A RCE AF +S I N + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEQALRCEAAAFEADSRIKNADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY + L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEANGQMQRDYWYDVSRQGTLLADPVSIGVKAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F +SG +LYRKS+FL +LG+K+F + I E PH++ + GSS+FD +G+
Sbjct: 251 AGGLFGSFLSAVSGGNLYRKSSFLEGALGQKLFPEWMTIDERPHLMQAMGSSAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y L TYS +KLGM +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVENGELVSYILGTYSGRKLGMPSTANAGGVHNLFV----THGEEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|237798591|ref|ZP_04587052.1| pmbA protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331021444|gb|EGI01501.1| pmbA protein [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 448
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 178/442 (40%), Positives = 273/442 (61%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+
Sbjct: 14 ELQEQVEQIIAEARRQGASACEVAVSVDQGLSTSVRQREVETVEFNRDQGFGITLYVGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++ +T+ AA IA T+ D +GL D + +DF LY W
Sbjct: 74 K----GSASTSATGADAIRETVAAALAIAEHTSEDESSGLADAALMAKEVMDFDLYHAWD 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + A A CE AF+ +S I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 130 ITPEQAIEQALTCEAAAFDADSRIKNADGTTLNTHQGCRVYGNSNGFVGGYASTRHSLSC 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L + IG AA R SRL A+ + T + PVLF A
Sbjct: 190 VMIAEGDGQMQRDYWYDVNRKGQLLADAQSIGRKAALRAASRLGARPVPTCEVPVLFAAE 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L F ISG +LYRKS+FL SLG+++F + I E PH++ + GSS+FD++G+
Sbjct: 250 LAGGLFGSFLGAISGGNLYRKSSFLEGSLGQRLFPEWMTIDERPHLMHAMGSSAFDSDGL 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+NG + Y LSTYS +KLGM +T N+GG H+L + T +++ ++++M
Sbjct: 310 ATYAKPFVENGDLVSYILSTYSGRKLGMPSTANAGGVHNLFV----THGTEDQDALIRRM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GS
Sbjct: 366 GRGLLVTELMGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGS 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GS+LIE M++AG
Sbjct: 426 DLELRSNIRTGSVLIERMMVAG 447
>gi|387892085|ref|YP_006322382.1| PmbA protein [Pseudomonas fluorescens A506]
gi|387162877|gb|AFJ58076.1| PmbA protein [Pseudomonas fluorescens A506]
Length = 448
Score = 350 bits (899), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 272/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + +L AK+ GAS + + G S VR+ +++ +E N D+ + +Y K
Sbjct: 15 LQEQVEQILAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYAGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D+ + + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAKHTSEDESSGLADKALMAKDVQDFDLFHAWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A +A CE AF+ ++ I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIELALTCEAAAFDADARIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEANGQMQRDYWYDVNRQGDLLADPASIGLRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL ++G+K+F + I E PH++ + GSSSFD +G+
Sbjct: 251 AGGLFGSFLGAISGGNLYRKSSFLEGAIGQKLFPEWLTIDERPHLMRAMGSSSFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TY+ +KLG+ +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVEQGELVSYVLGTYAGRKLGLPSTANAGGVHNLFV----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|425897550|ref|ZP_18874141.1| PmbA protein [Pseudomonas chlororaphis subsp. aureofaciens 30-84]
gi|397891838|gb|EJL08316.1| PmbA protein [Pseudomonas chlororaphis subsp. aureofaciens 30-84]
Length = 448
Score = 350 bits (898), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 272/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D + + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAKHTSEDESSGLADAALMARDVPDFDLFHAWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF +S I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIERALTCEAAAFAADSRIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGHLLTDPVTIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL +LG+++F + I E PH++ + GSS+FD +G+
Sbjct: 251 AGGLFGSFLGAISGGNLYRKSSFLEGALGQRLFPEWLTIDERPHLMRALGSSAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y L TYS +KLG+ +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVENGELVSYVLGTYSGRKLGLPSTANAGGVHNLFV----THGEEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MFKQI+A+G+D
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFKQIIAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M++AG
Sbjct: 427 LELRSNIRTGSVLIERMMVAG 447
>gi|386826594|ref|ZP_10113701.1| putative Zn-dependent protease-like protein [Beggiatoa alba B18LD]
gi|386427478|gb|EIJ41306.1| putative Zn-dependent protease-like protein [Beggiatoa alba B18LD]
Length = 441
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 173/444 (38%), Positives = 279/444 (62%), Gaps = 10/444 (2%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
EF+Q +L AK GAS + +G +V VR+ +D IE + K+ + +Y+
Sbjct: 5 EFEQRLAHVLEKAKHYGASSAEASLRLTHGQTVTVRQQNVDTIEHHQGKSFAISVYMGQQ 64
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++ ++D + ++ +TI AA +IAR T D + GL D N + LD LY PW
Sbjct: 65 K----GSAGSNDLSETAIEETIQAACDIARHTQGDEYIGLADANLMATQILDLDLYHPWT 120
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
+S ++A +A R E+ A ++ I ++ ++ ++ N+HGF+ G+ ++H ++
Sbjct: 121 ISTEEAIELAKRMEHAACAVDTRIKSSADSRISKNAVIRYYGNTHGFIGGWQSTRHSLNC 180
Query: 197 SPIAIKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
IA + +MQRD+WY+++ DP+ LD E +G AA+R + L + + T++ P+LF
Sbjct: 181 RAIAQESPTGQMQRDSWYTASRDPQLLDVAENVGRIAAERALRYLNPRSLPTQQAPILFS 240
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
AP+A L+ I G SLYRK++FL+D++G++IFS + I E+PH+L S+ FD E
Sbjct: 241 APMAVGLIGHLISAIQGASLYRKASFLLDTVGEQIFSPIVNIRENPHLLKGLASAPFDGE 300
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV T+ R +++ G++QGY L +Y+A++LG++TTGN+G +L I S ++ NL +L+
Sbjct: 301 GVATKARELIRGGVLQGYILDSYTARRLGLQTTGNAGSVFNLTIDS----TTGNLDSLLQ 356
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
++ TGL VTELMG G+N +TG YS+GA G+W+ENG IQY V+EITI+G L++MF+ + AI
Sbjct: 357 QLGTGLYVTELMGQGVNLLTGHYSRGASGFWVENGVIQYPVQEITIAGNLKDMFQSVQAI 416
Query: 435 GSDVLTRNSNTSGSILIENMIIAG 458
G+D+ R S +GS L+ M IAG
Sbjct: 417 GNDLEKRGSVLTGSWLLAPMTIAG 440
>gi|378948868|ref|YP_005206356.1| protein TldE [Pseudomonas fluorescens F113]
gi|359758882|gb|AEV60961.1| TldE [Pseudomonas fluorescens F113]
Length = 448
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 177/441 (40%), Positives = 269/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + +L AK+ GA+ + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQILAEAKRQGATACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAKHTSEDEASGLADAALMCKELRDFDLFHAWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A RCE AF +S I N + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEQALRCEAAAFEADSRIKNADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY + L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEANGQMQRDYWYDVSRQGTLLADPVSIGQKAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F +SG +LYRKS+FL +LG+K+F + I E PH++ + GSS+FD +G+
Sbjct: 251 AGGLFGSFLSAVSGGNLYRKSSFLEGALGQKLFPEWMTIDERPHLMQAMGSSAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y L TYS +KLGM +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVENGELVSYILGTYSGRKLGMPSTANAGGVHNLFV----THGEEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|395497138|ref|ZP_10428717.1| putative modulation of DNA gyrase-like protein [Pseudomonas sp.
PAMC 25886]
Length = 448
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 177/441 (40%), Positives = 272/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D + + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAKHTSEDESSGLADAALMARDLKDFDLFHAWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF+ +S I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEQALTCEAAAFDADSRIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEANGQMQRDYWYDVNRQGDLLADPVSIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL ++G+K+F + I E PH++ + GSSSFD +G+
Sbjct: 251 AGGLFGSFLGAISGGNLYRKSSFLEGAIGQKLFPEWLTIDERPHLMRAMGSSSFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y L TY+ +KLG+ +T N+GG H+L I T ++ +L++M
Sbjct: 311 TYAKPFVENGELVSYVLGTYAGRKLGLPSTANAGGVHNLFI----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIEKMTVAG 447
>gi|406945511|gb|EKD76978.1| hypothetical protein ACD_42C00513G0002 [uncultured bacterium]
Length = 435
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 174/419 (41%), Positives = 272/419 (64%), Gaps = 9/419 (2%)
Query: 41 FNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINA 100
++ +GF+V R G+++ +E + +KN +V +Y D + G++S+SDF +++ TI
Sbjct: 26 LSQSSGFTVDARLGEVETLEHHLNKNFSVTVY-HDQRT---GHASSSDFSVEAIQKTIEK 81
Query: 101 AYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLI 160
A +IA F++ D FAGL D + L M+ D LY PW ++ DA +A CE +A +F+ I
Sbjct: 82 AVSIASFSSQDIFAGLADVSRLAMHYPDCDLYHPWNITPPDAIQLAIACEKKALSFDKRI 141
Query: 161 VNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKK 220
VN++ + + + L AN+ GF+ + SK +IS S +A + +MQRD+ Y+ K
Sbjct: 142 VNSDGASICSNHAEILYANTLGFLGEFKSSKQVISCSVVASENNKMQRDSDYTIARHAKD 201
Query: 221 LDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTF 280
L + + AA++T+ RL ++ T+ CPV+FEA +A LL F ISG +LYR+S+F
Sbjct: 202 LWSADQVAISAAEKTVRRLNPMRVKTQTCPVIFEASIAKSLLGHFVTAISGGNLYRQSSF 261
Query: 281 LVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAK 340
L+++LGK IF HI I + PH+L + GS FD++GV T + +++G ++ Y L TYSA+
Sbjct: 262 LLNALGKPIFPVHINIFQQPHLLSAMGSRPFDHDGVATIDQHYIRDGQLENYVLGTYSAR 321
Query: 341 KLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKG 400
KLGM+TTGN+GG +L + S ++ ++++KM+ GL +TELMG G+N TGDYS+G
Sbjct: 322 KLGMQTTGNAGGVFNLGV-----NGSGSVSDLIRKMDRGLFITELMGQGVNITTGDYSRG 376
Query: 401 AFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
A G+W+E G+IQ+ VEEITI+G L+NMF I+AI DV R + +GSILI+ M +AG+
Sbjct: 377 ASGFWVEKGEIQFPVEEITIAGNLKNMFAGIIAIADDVDVRGTIRAGSILIDQMTVAGE 435
>gi|407791157|ref|ZP_11138245.1| putative Zn-dependent protease-like protein [Gallaecimonas
xiamenensis 3-C-1]
gi|407201495|gb|EKE71495.1| putative Zn-dependent protease-like protein [Gallaecimonas
xiamenensis 3-C-1]
Length = 444
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 182/452 (40%), Positives = 270/452 (59%), Gaps = 12/452 (2%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S I + L L+YAK++G + + + + G SV R G+++ IE N D +
Sbjct: 2 SDIIQDMKAVEALVGQGLDYAKQLGVTGAEMAISRQTGISVSTRLGEVENIEFNKDGALG 61
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
V ++ K G++STSD +++ + + AA IAR T+ D G+ D + L + D
Sbjct: 62 VTVFRGKAK----GSASTSDLRVEAIREAVEAADRIARLTSEDEANGMADPDMLALAYPD 117
Query: 129 FKLYTPWFLSIDDAKLIAY--RCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
LY P +D A+ IAY RCE A + I N++ + + N+ G +
Sbjct: 118 LGLYHP--ADLDPAQAIAYAKRCEEAALAADPRISNSDGASFASHTGFKVYGNTAGMLGS 175
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
YP S+H +S IA G++M+RD YS LD E +G AA+ T++RL A+K+ T
Sbjct: 176 YPSSRHSLSCVVIAKDGEQMERDYDYSIARRLDLLDDAEALGRSAARNTLARLGAQKLGT 235
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
+ PVLF+A +A L ISG SLYR+S+FL+DSLG ++ +QI EDPH+LG
Sbjct: 236 MQVPVLFQADVATGLWGHLVGAISGGSLYRRSSFLLDSLGTQVLPDFVQISEDPHVLGGL 295
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
S+ FD+EGV+T KR ++ G++Q Y L++YS ++LGM+TTG++GG H+ + N
Sbjct: 296 ASTPFDSEGVRTVKRNIIDGGVLQTYLLTSYSGRRLGMQTTGHAGGIHNWYVKGN----G 351
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
D+ M+K+++ GL+VTELMG GIN +TGDYS+GA G+W+ENG+IQY V EITI+G L++
Sbjct: 352 DDFAAMVKRLDRGLIVTELMGQGINMVTGDYSRGAGGFWVENGQIQYPVSEITIAGNLKD 411
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
M I AIGSD R +GS+LI+ M IAG
Sbjct: 412 MLMGISAIGSDEERRGGIHTGSVLIDRMTIAG 443
>gi|398961830|ref|ZP_10678947.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM30]
gi|398151903|gb|EJM40437.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM30]
Length = 448
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 270/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEARRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS ++ +T+ AA IA+ T+ D +GL D + + DF L+ W +
Sbjct: 75 ----GSASTSATGPDAIRETVAAALAIAKHTSEDEASGLADAALMARDVQDFDLFHEWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF+ ++ I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEKALLCEAAAFDADARIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGSLLADPVSIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F +SG SLYRKS+FL +LG+K+F + I E PH++ + GS+S+D +G+
Sbjct: 251 AGGLFGSFLSAVSGGSLYRKSSFLEGTLGQKLFPEWLTIDERPHLMRAMGSASYDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TYS +KLGM +T N+GG H+L + T ++ +LK+M
Sbjct: 311 TYAKPFVEKGELVSYILGTYSGRKLGMPSTANAGGVHNLFV----THGDEDQAALLKRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|384428571|ref|YP_005637931.1| PmbA protein [Xanthomonas campestris pv. raphani 756C]
gi|341937674|gb|AEL07813.1| PmbA protein [Xanthomonas campestris pv. raphani 756C]
Length = 455
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 269/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+++Q +L A+ GA+ + + +E G V VR G+++ +E D+ + V +Y GK
Sbjct: 21 LTEISQRLLERARAAGATQAEVSCSEERGLDVNVRLGEVETVESTRDRGIAVTVYF--GK 78
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G++ST+D + SL T+ A IAR+T D AGL D + + + + PW L
Sbjct: 79 R--KGSASTADLQESSLEATVAQACAIARYTEDDPAAGLADAELMAHDFPELDSWHPWAL 136
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A +A CEN ++ I N++ +T S + ANSHGF+ + H IS +
Sbjct: 137 DADTAVDLALACENAGRQADARISNSDGASASTGLSLSVYANSHGFIGRERGTHHSISCA 196
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD WYSS + L+ P+ IG +AA RT++RL+ + + T + PVLF +
Sbjct: 197 LIAGQGDGMQRDGWYSSALAREDLEAPDAIGRHAAARTVARLQPRSLPTGQLPVLFAPEV 256
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G ++F I E PH+ S++FD EGV
Sbjct: 257 ARSLVGHLLGAVSGGALYRRASFLLDSVGTQLFPDWFGIEELPHLRRGMRSAAFDGEGVA 316
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T++ +V G++Q Y L +YSA+KLG++TT N+GG H+L + SN + +L M+ M+
Sbjct: 317 TRRSALVDGGVLQRYVLGSYSARKLGLQTTANAGGVHNLQVTSN----AGDLASMVAGMS 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG+G+N +TGDYS+GA G+W+ENG+I Y V+ +TI+G L++MF I A+GSD
Sbjct: 373 RGLLVTELMGNGVNAVTGDYSRGAGGFWVENGEIAYPVDGLTIAGNLRDMFAGIEAVGSD 432
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ GS+LI M +AG
Sbjct: 433 VDPRSHVKIGSVLINRMTVAG 453
>gi|423689960|ref|ZP_17664480.1| PmbA protein [Pseudomonas fluorescens SS101]
gi|387998943|gb|EIK60272.1| PmbA protein [Pseudomonas fluorescens SS101]
Length = 448
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 271/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + +L AK+ GAS + + G S VR+ +++ +E N D+ + +Y K
Sbjct: 15 LQEQVEQILAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYAGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D+ + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAKHTSEDESSGLADKALMAKEVQDFDLFHAWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A +A CE AF+ ++ I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIELALTCEAAAFDADARIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEANGQMQRDYWYDVNRQGDLLADPASIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL ++G+K+F + I E PH++ + GSSSFD +G+
Sbjct: 251 AGGLFGSFLGAISGGNLYRKSSFLEGAIGQKLFPEWLTIDERPHLMRAMGSSSFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TY+ +KLG+ +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVEKGELVSYVLGTYAGRKLGLPSTANAGGVHNLFV----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|77457074|ref|YP_346579.1| microcin-processing peptidase 1 [Pseudomonas fluorescens Pf0-1]
gi|77381077|gb|ABA72590.1| putative modulation of DNA gyrase-related protein [Pseudomonas
fluorescens Pf0-1]
Length = 448
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 270/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEARRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS ++ +T+ AA IA+ T+ D +GL D + + DF L+ W +
Sbjct: 75 ----GSASTSATGPDAIRETVAAALAIAKHTSEDEASGLADAALMARDIQDFDLFHQWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF+ ++ I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEKALLCEAAAFDADARIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGSLLADPVSIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG SLYRKS+FL +LG+K+F + I E PH++ + GS+S+D +G+
Sbjct: 251 AGGLFGSFLSAISGGSLYRKSSFLEGTLGQKLFPEWLTIDERPHLMRAMGSASYDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TYS +KLGM +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVEKGELVSYILGTYSGRKLGMPSTANAGGVHNLFV----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|388470272|ref|ZP_10144481.1| PmbA protein [Pseudomonas synxantha BG33R]
gi|388006969|gb|EIK68235.1| PmbA protein [Pseudomonas synxantha BG33R]
Length = 448
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 177/441 (40%), Positives = 271/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + +L AK+ GAS + + G S VR+ +++ +E N D+ + +Y K
Sbjct: 15 LQEQVEQILAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYAGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D+ + + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAKHTSEDESSGLADKALMARDVQDFDLFHAWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF+ + I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEQALICEAAAFDTDPRIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEANGQMQRDYWYDVNRQGDLLADPVSIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL ++G+K+F + I E PH++ + GSSSFD +G+
Sbjct: 251 AGGLFGSFLGAISGGNLYRKSSFLEGAIGQKLFPEWLTIDERPHLMRAMGSSSFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y L TY+ +KLG+ +T NSGG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVENGELVSYVLGTYAGRKLGLPSTANSGGVHNLFV----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGQGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|440738949|ref|ZP_20918471.1| putative modulation of DNA gyrase-like protein [Pseudomonas
fluorescens BRIP34879]
gi|447915230|ref|YP_007395798.1| putative modulation of DNA gyrase-like protein [Pseudomonas poae
RE*1-1-14]
gi|440380321|gb|ELQ16888.1| putative modulation of DNA gyrase-like protein [Pseudomonas
fluorescens BRIP34879]
gi|445199093|gb|AGE24302.1| putative modulation of DNA gyrase-like protein [Pseudomonas poae
RE*1-1-14]
Length = 448
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 272/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + +L AK+ GA + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQILAEAKRQGAGACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS ++ +T+ AA IAR T+ D +GL D+ + + DF L+ W +
Sbjct: 75 ----GSASTSASGPDAIRETVAAALAIARHTSEDESSGLADKALMARDVQDFDLFHAWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF+ ++ I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEQALTCEAAAFDADARIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N + L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEANGQMQRDYWYDVNRQGELLADPVSIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL ++G+K+F + I E PH++ + GSSSFD +G+
Sbjct: 251 AGGLFGSFLGAISGGNLYRKSSFLEGAIGQKLFPEWMTIDERPHLMRAMGSSSFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TY+A+KLG+ +T N+GG H+L + + ++ +L++M
Sbjct: 311 TYAKPFVEQGELVSYVLGTYAARKLGLPSTANAGGVHNLFV----SHGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MF+QIVA+G+D
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFRQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|188990954|ref|YP_001902964.1| modulator of DNA gyrase; peptidase U62 protein PmbA [Xanthomonas
campestris pv. campestris str. B100]
gi|167732714|emb|CAP50908.1| Putative modulator of DNA gyrase; peptidase U62 protein PmbA
[Xanthomonas campestris pv. campestris]
Length = 470
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 268/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++Q +L A+ GA+ + + +E G V VR G+++ +E D+ + V +Y GK
Sbjct: 36 LTDISQRLLERARAAGATQAEVSCSEERGLDVNVRLGEVETVESTRDRGIAVTVYF--GK 93
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G++ST+D + SL T+ A IAR+T D AGL D + + + + PW L
Sbjct: 94 R--KGSASTADLQESSLEATVAQACAIARYTEDDPAAGLADAELMARDFPELDSWHPWAL 151
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A +A CEN ++ I N++ +T S + ANSHGF+ + H IS +
Sbjct: 152 DADTAVDLALACENAGRQADARISNSDGASASTGLSLSVYANSHGFIGRERGTHHSISCA 211
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD WYSS + L+ P+ IG +AA RT++RL+ + + T + PVLF +
Sbjct: 212 LIAGQGDGMQRDGWYSSALAREDLEAPDAIGRHAAARTVARLQPRSLPTGQLPVLFAPEV 271
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G ++F I E PH+ S++FD EGV
Sbjct: 272 ARSLVGHLLGAVSGGALYRRASFLLDSVGTQLFPDWFGIEELPHLRRGLRSAAFDGEGVA 331
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T++ +V G++Q Y L +YSA+KLG++TT N+GG H+L + +N + +L M+ M+
Sbjct: 332 TRRSALVDGGVLQRYVLGSYSARKLGLQTTANAGGVHNLQVTAN----AGDLASMVAGMS 387
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG+G+N +TGDYS+GA G+W+ENG+I Y V+ +TI+G L++MF I A+GSD
Sbjct: 388 RGLLVTELMGNGVNAVTGDYSRGAGGFWVENGEIAYPVDGLTIAGNLRDMFAGIEAVGSD 447
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ GS+LI M +AG
Sbjct: 448 VDPRSHVKIGSVLINRMTVAG 468
>gi|21232035|ref|NP_637952.1| PmbA protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66767838|ref|YP_242600.1| PmbA protein [Xanthomonas campestris pv. campestris str. 8004]
gi|21113774|gb|AAM41876.1| PmbA protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66573170|gb|AAY48580.1| PmbA protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 455
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 268/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++Q +L A+ GA+ + + +E G V VR G+++ +E D+ + V +Y GK
Sbjct: 21 LTDISQRLLERARAAGATQAEVSCSEERGLDVNVRLGEVETVESTRDRGIAVTVYF--GK 78
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G++ST+D + SL T+ A IAR+T D AGL D + + + + PW L
Sbjct: 79 R--KGSASTADLQESSLEATVAQACAIARYTEDDPAAGLADAELMARDFPELDSWHPWAL 136
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A +A CEN ++ I N++ +T S + ANSHGF+ + H IS +
Sbjct: 137 DADTAVDLALACENAGRQADARISNSDGASASTGLSLSVYANSHGFIGRERGTHHSISCA 196
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD WYSS + L+ P+ IG +AA RT++RL+ + + T + PVLF +
Sbjct: 197 LIAGQGDGMQRDGWYSSALAREDLEAPDAIGRHAAARTVARLQPRSLPTGQLPVLFAPEV 256
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G ++F I E PH+ S++FD EGV
Sbjct: 257 ARSLVGHLLGAVSGGALYRRASFLLDSVGTQLFPDWFGIEELPHLRRGLRSAAFDGEGVA 316
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T++ +V G++Q Y L +YSA+KLG++TT N+GG H+L + +N + +L M+ M+
Sbjct: 317 TRRSALVDGGVLQRYVLGSYSARKLGLQTTANAGGVHNLQVTAN----AGDLASMVAGMS 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG+G+N +TGDYS+GA G+W+ENG+I Y V+ +TI+G L++MF I A+GSD
Sbjct: 373 RGLLVTELMGNGVNAVTGDYSRGAGGFWVENGEIAYPVDGLTIAGNLRDMFAGIEAVGSD 432
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ GS+LI M +AG
Sbjct: 433 VDPRSHVKIGSVLINRMTVAG 453
>gi|346642739|ref|YP_258036.2| PmbA protein [Pseudomonas protegens Pf-5]
gi|341579876|gb|AAY90192.2| PmbA protein [Pseudomonas protegens Pf-5]
Length = 448
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 272/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYLGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D + + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAKHTSEDEASGLADAALMAKDLQDFDLFHAWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF +S I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEQALTCEAAAFAADSRIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N + L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGQLLADPVSIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL +LG+++F + I E PH++ + GSS+FD +G+
Sbjct: 251 AGGLFGSFLGAISGGNLYRKSSFLEGALGQQLFPQWMTIDERPHLMRAMGSSAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + +++G + Y L TYS +KLGM +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFIQDGELVSYVLGTYSGRKLGMPSTANAGGVHNLFV----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G L++MFKQI+A+G+D
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNLRDMFKQILAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|332290162|ref|YP_004421014.1| peptidase PmbA [Gallibacterium anatis UMN179]
gi|330433058|gb|AEC18117.1| peptidase PmbA [Gallibacterium anatis UMN179]
Length = 449
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 185/448 (41%), Positives = 285/448 (63%), Gaps = 13/448 (2%)
Query: 17 EFQQLA-QDMLNYA----KKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVII 71
E QQ A +D++ YA +K GAS + + + +G SV R G+I+ +E NND M + +
Sbjct: 10 EQQQTALKDVVAYALSLAEKAGAS-AEVGMTKVSGLSVSTRLGEIENLEFNNDGAMGISV 68
Query: 72 YIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKL 131
YI + K GN+STSD ++++ T+ +A +IA++T+ D GL + +E NP D +L
Sbjct: 69 YIGNKK----GNASTSDLSEQAIKRTVESALSIAKYTSEDPCTGLAPKALMEFNPPDLQL 124
Query: 132 YTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSK 191
Y P +S+D A +A E A N++ IVN+E G + + + N++G ++ YP S+
Sbjct: 125 YHPADISVDQAVALALEAEKTALNYDKKIVNSEGGGFNSSEGIRVYGNTYGVLNSYPSSR 184
Query: 192 HIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPV 251
+ +S S IA + ++RD Y+ + +L +G A++T++RL +K+ST PV
Sbjct: 185 YSLSCSVIAAENDHLERDYEYTISRKFNELATATWVGERCAQKTLARLNPQKLSTLNVPV 244
Query: 252 LFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSF 311
+F +A ++ A ISG +LYRKS+FL+D LG+ I I E PH+L S+ F
Sbjct: 245 IFLNDVATGIIGHLASAISGGALYRKSSFLLDKLGETILPDWFVIEERPHLLAQLASTPF 304
Query: 312 DNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKE 371
D+EGVKT+ ++ +G++Q Y L++YSAKKLGM+TTG++GG H+ ++ K S L
Sbjct: 305 DSEGVKTRDHNIIVDGVLQTYLLTSYSAKKLGMQTTGHAGGIHNWLV---KANSGGGLNA 361
Query: 372 MLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQI 431
+LK+M TGLLVTELMG G+N +TGDYS+GA G+W+ENG+I++ V EITI+ L MFKQI
Sbjct: 362 LLKQMGTGLLVTELMGQGVNLVTGDYSRGASGFWVENGEIKFPVSEITIASSLPEMFKQI 421
Query: 432 VAIGSDVLTRNSNTSGSILIENMIIAGK 459
VA+G D+ R++ +GSILIE M I+G+
Sbjct: 422 VAVGDDIELRSNIRTGSILIEQMKISGE 449
>gi|28871598|ref|NP_794217.1| pmbA protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213966621|ref|ZP_03394772.1| pmbA protein [Pseudomonas syringae pv. tomato T1]
gi|301383131|ref|ZP_07231549.1| pmbA protein [Pseudomonas syringae pv. tomato Max13]
gi|302063719|ref|ZP_07255260.1| pmbA protein [Pseudomonas syringae pv. tomato K40]
gi|302133807|ref|ZP_07259797.1| pmbA protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28854850|gb|AAO57912.1| pmbA protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213928471|gb|EEB62015.1| pmbA protein [Pseudomonas syringae pv. tomato T1]
Length = 448
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 179/442 (40%), Positives = 271/442 (61%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+
Sbjct: 14 ELQEQVEQIIAEARRQGASACEVAVSVDQGLSTSVRQREVETVEFNRDQGFGITLYVGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++ +T+ AA IA T+ D +GL D + +DF LY W
Sbjct: 74 K----GSASTSATGADAIRETVAAALAIAEHTSEDESSGLADAALMAKEVMDFDLYHTWD 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + A A CE AF+ +S I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 130 ITPEQAIEKALICEAAAFDADSRIKNADGTTLNTHQGCRVYGNSNGFIGGYASTRHSLSC 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L + IG AA R SRL A+ + T + PVLF A
Sbjct: 190 VMIAEGEGQMQRDYWYDVNRKGELLVDAQSIGRKAALRAASRLGARPVPTCEVPVLFAAE 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L F ISG SLYRKS+FL +LG+++F + I E PH+ + GSS+FD++G+
Sbjct: 250 LAGGLFGSFLGAISGGSLYRKSSFLEGTLGQRLFPEWMTIDERPHLKHAMGSSAFDSDGL 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+NG + Y LSTYS +KLGM +T N+GG H+L + T S++ ++++M
Sbjct: 310 ATYAKPFVENGDLVSYILSTYSGRKLGMPSTANAGGVHNLFV----THGSEDQAALIRRM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GS
Sbjct: 366 GRGLLVTELMGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGS 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GS+LIE M +AG
Sbjct: 426 DLELRSNIRTGSVLIERMTVAG 447
>gi|398853748|ref|ZP_10610343.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM80]
gi|398238828|gb|EJN24550.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM80]
Length = 448
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 270/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D + DF L+ W +
Sbjct: 75 ----GSASTSATGPEAIRETVAAALAIAKHTSEDEASGLADAALMAREQQDFDLFHEWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF+ ++ I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEKALICEAAAFDADARIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY + L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVSRQGTLLADPVSIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F +SG SLYRKS+FL +LG+K+F + I E PH++ + GS+S+D +G+
Sbjct: 251 AGGLFGSFLSAVSGGSLYRKSSFLEGTLGQKLFPEWLTIDERPHLMRAMGSASYDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TYS +KLGM +T N+GG H+L + T ++ +LK+M
Sbjct: 311 TYAKPFVEKGELVSYILGTYSGRKLGMPSTANAGGVHNLFV----THGDEDQAALLKRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|422658055|ref|ZP_16720492.1| pmbA protein [Pseudomonas syringae pv. lachrymans str. M302278]
gi|331016678|gb|EGH96734.1| pmbA protein [Pseudomonas syringae pv. lachrymans str. M302278]
Length = 448
Score = 347 bits (891), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 179/442 (40%), Positives = 271/442 (61%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+
Sbjct: 14 ELQEQVEHIIAEARRQGASACEVAVSVDQGLSTSVRQREVETVEFNRDQGFGITLYVGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++ +T+ AA IA T+ D +GL D + +DF LY W
Sbjct: 74 K----GSASTSATGADAIRETVAAALAIAEHTSEDESSGLADAALMAKEVMDFDLYHTWD 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + A A CE AF+ +S I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 130 ITPEQAIEKALICEAAAFDADSRIKNADGTTLNTHQGCRVYGNSNGFIGGYASTRHSLSC 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L + IG AA R SRL A+ + T + PVLF A
Sbjct: 190 VMIAEGEGQMQRDYWYDVNRKGELLVDAQSIGRKAALRAASRLGARPVPTCEVPVLFAAE 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L F ISG SLYRKS+FL +LG+++F + I E PH+ + GSS+FD++G+
Sbjct: 250 LAGGLFGSFLGAISGGSLYRKSSFLEGTLGQRLFPEWMTIDERPHLKHAMGSSAFDSDGL 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+NG + Y LSTYS +KLGM +T N+GG H+L + T S++ ++++M
Sbjct: 310 ATYAKPFVENGDLVSYILSTYSGRKLGMPSTANAGGVHNLFV----THGSEDQAALIRRM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GS
Sbjct: 366 GRGLLVTELMGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGS 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GS+LIE M +AG
Sbjct: 426 DLELRSNIRTGSVLIERMTVAG 447
>gi|398976058|ref|ZP_10686020.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM25]
gi|398139610|gb|EJM28605.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM25]
Length = 448
Score = 347 bits (890), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 270/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS ++ +T+ AA IA+ T+ D +GL D + + DF L+ W +
Sbjct: 75 ----GSASTSATGPDAIRETVAAALAIAKHTSEDEASGLADAALMARDIQDFDLFHQWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF+ ++ I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEKALLCEAAAFDADARIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGSLLADPVSIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG SLYRKS+FL +LG+K+F + I E PH++ + GS+S+D +G+
Sbjct: 251 AGGLFGSFLSAISGGSLYRKSSFLEGTLGQKLFPEWLTIDERPHLMRAMGSASYDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TYS +KLGM +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVEKGELVSYILGTYSGRKLGMPSTANAGGVHNLFV----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+E+G+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVEDGEIQFAVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIEKMTVAG 447
>gi|421524400|ref|ZP_15971023.1| PmbA protein [Pseudomonas putida LS46]
gi|402751829|gb|EJX12340.1| PmbA protein [Pseudomonas putida LS46]
Length = 448
Score = 347 bits (890), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 268/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEAIIAEARRQGASACEVAVSLEQGLSTTVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IAR T+ D +GL D + D LY W +
Sbjct: 75 ----GSASTSASGPEAIRETVTAALAIARHTSEDECSGLADAALMAREIPDLDLYHDWGI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ A +A CE AF+ + I+N + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 EPEKAIEMALACEAAAFDADPRILNADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEGDGQMQRDYWYDVNRQGNLLADPSSIGVRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL ++G+++F S + + E PHI + GS++FD +G+
Sbjct: 251 AGGLFGSFLSAISGGNLYRKSSFLEGTIGQRLFPSWLTLDERPHIPRALGSAAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V G + Y L TYS +KLG+ +T NSGG H+L + + ++ ++++M
Sbjct: 311 TYAKPFVDKGELVSYLLGTYSGRKLGLPSTANSGGVHNLFV----SHGVEDQAALIRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MF+QIVAIGSD
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQHAVQEVTIAGNMKDMFQQIVAIGSD 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ TR++ +GS+LIE M +AG
Sbjct: 427 LETRSNIHTGSVLIERMTVAG 447
>gi|229588416|ref|YP_002870535.1| putative modulation of DNA gyrase-like protein [Pseudomonas
fluorescens SBW25]
gi|229360282|emb|CAY47139.1| putative modulation of DNA gyrase-related protein [Pseudomonas
fluorescens SBW25]
Length = 452
Score = 347 bits (890), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 273/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + +L AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 19 LQEQVEQILAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 78
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D+ + + DF L+ W +
Sbjct: 79 ----GSASTSASGPEAIRETVAAALAIAKHTSEDESSGLADKALMAKDLKDFDLFHAWDI 134
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF+ ++ I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 135 TPEQAIEQALTCEAAAFDADARIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 194
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 195 MIAEANGQMQRDYWYDVNRQGDLLADPVSIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 254
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL ++G+K+F + I E PH++ + GS+SFD +G+
Sbjct: 255 AGGLFGSFLGAISGGNLYRKSSFLEGAIGQKLFPEWLTIDERPHLMRAMGSTSFDGDGLA 314
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V++G + Y L TY+ +KLG+ +T NSGG H+L + T ++ +L++M
Sbjct: 315 TYAKPFVESGELVSYVLGTYAGRKLGLPSTANSGGVHNLFV----THGDEDQAALLRRMG 370
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 371 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFKQIVAVGND 430
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 431 LELRSNIRTGSVLIERMTVAG 451
>gi|398986907|ref|ZP_10691763.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM24]
gi|399014488|ref|ZP_10716779.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM16]
gi|398111053|gb|EJM00945.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM16]
gi|398151480|gb|EJM40028.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM24]
Length = 448
Score = 347 bits (890), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 268/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS ++ +T+ AA IA+ T+ D +GL D + DF L+ W +
Sbjct: 75 ----GSASTSATGPDAIRETVAAALAIAKHTSEDEASGLADAALMAKEQHDFDLFHEWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF+ ++ I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEKALLCEAAAFDADARIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGSLLADPVSIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F +SG SLYRKS+FL +LG+K+F + I E PH++ + GS+S+D +G+
Sbjct: 251 AGGLFGSFLSAVSGGSLYRKSSFLEGTLGQKLFPEWLTIDERPHLMRAMGSASYDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TYS +KLGM +T N+GG H+L + T ++ +LK+M
Sbjct: 311 TYAKPFVEKGELVSYILGTYSGRKLGMPSTANAGGVHNLFV----THGDEDQAALLKRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +G +LIE M +AG
Sbjct: 427 LELRSNIRTGCVLIERMTVAG 447
>gi|386010605|ref|YP_005928882.1| PmbA protein [Pseudomonas putida BIRD-1]
gi|313497311|gb|ADR58677.1| PmbA [Pseudomonas putida BIRD-1]
Length = 448
Score = 347 bits (890), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 268/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEAIIAEARRQGASACEVAVSLEQGLSTTVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IAR T+ D +GL D + D LY W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIARHTSEDECSGLADAALMAREIPDLDLYHDWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ A +A CE AF+ + I+N + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 EPEKAIEMALACEAAAFDADPRILNADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEGDGQMQRDYWYDVNRQGNLLADPSSIGLRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL ++G+++F S + + E PHI + GS++FD +G+
Sbjct: 251 AGGLFGSFLSAISGGNLYRKSSFLEGTIGQRLFPSWLTLDERPHIPRALGSAAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V G + Y L TYS +KLG+ +T NSGG H+L + + ++ ++++M
Sbjct: 311 TYAKPFVDKGELVSYLLGTYSGRKLGLPSTANSGGVHNLFV----SHGVEDQAALIRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MF+QIVAIGSD
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQHAVQEVTIAGNMKDMFQQIVAIGSD 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ TR++ +GS+LIE M +AG
Sbjct: 427 LETRSNIHTGSVLIERMTVAG 447
>gi|422615811|ref|ZP_16684518.1| pmbA protein [Pseudomonas syringae pv. japonica str. M301072]
gi|330895279|gb|EGH27617.1| pmbA protein [Pseudomonas syringae pv. japonica str. M301072]
Length = 448
Score = 347 bits (890), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 178/442 (40%), Positives = 270/442 (61%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+
Sbjct: 14 ELQEQVEQIIAEARRQGASACEVAVSVDQGLSTSVRQREVETVEFNRDQGFGITLYVGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++ +T+ AA IA T+ D +GL D + +DF LY W
Sbjct: 74 K----GSASTSATGADAIRETVAAALAIAEHTSEDESSGLADAALMAKEVMDFDLYHTWD 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + A A CE AF+ +S I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 130 ITPEQAIEKALLCEAAAFDADSRIKNADGTTLNTHQGCRVYGNSNGFIGGYASTRHSLSC 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L + IG AA R SRL A+ + T + PVLF A
Sbjct: 190 VMIAEGEGQMQRDYWYDVNRQGELLADAQSIGRKAALRAASRLGARPVPTCEVPVLFAAE 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L F ISG +LYRKS+FL +LG+++F + I E PH+ + GSS+FD++G+
Sbjct: 250 LAGGLFGSFLGAISGGTLYRKSSFLEGALGQRLFPEWMTIDERPHLKHAMGSSAFDSDGL 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+ G + Y LSTYS +KLGM +T N+GG H+L + T SD+ ++++M
Sbjct: 310 ATFAKPFVEGGDLVSYVLSTYSGRKLGMPSTANAGGVHNLFV----THGSDDQAALIRRM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GS
Sbjct: 366 GRGLLVTELMGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGS 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GS+LIE M +AG
Sbjct: 426 DLELRSNIRTGSVLIERMTVAG 447
>gi|148546225|ref|YP_001266327.1| C69 family peptidase [Pseudomonas putida F1]
gi|148510283|gb|ABQ77143.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Pseudomonas putida F1]
Length = 448
Score = 347 bits (889), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 268/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEAIIAEARRQGASACEVAVSLEQGLSTTVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IAR T+ D +GL D + D LY W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIARHTSEDECSGLADAALMAREIPDLDLYHDWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ A +A CE AF+ + I+N + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 EPEKAIEMALACEAAAFDADPRILNADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEGDGQMQRDYWYDVNRQGNLLADPSSIGMRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL ++G+++F S + + E PHI + GS++FD +G+
Sbjct: 251 AGGLFGSFLSAISGGNLYRKSSFLEGTIGQRLFPSWLTLDERPHIPRALGSAAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V G + Y L TYS +KLG+ +T NSGG H+L + + ++ ++++M
Sbjct: 311 TYAKPFVDKGELVSYLLGTYSGRKLGLPSTANSGGVHNLFV----SHGVEDQAALIRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MF+QIVAIGSD
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQHAVQEVTIAGNMKDMFQQIVAIGSD 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ TR++ +GS+LIE M +AG
Sbjct: 427 LETRSNIHTGSVLIERMTVAG 447
>gi|408823036|ref|ZP_11207926.1| peptidase U62 modulator of DNA gyrase [Pseudomonas geniculata N1]
Length = 455
Score = 347 bits (889), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 172/438 (39%), Positives = 272/438 (62%), Gaps = 8/438 (1%)
Query: 21 LAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMF 80
L+Q +L+ A+ +GAS + + +E G V VR G+++ ++ D+ + V +Y K
Sbjct: 24 LSQQLLDRARALGASQAEVSCSEDRGLEVNVRLGEVETVQSTRDRGIAVTVYFGQRK--- 80
Query: 81 YGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSID 140
G++ST D + SL T+ A IAR T D AGL + + + D + PW L D
Sbjct: 81 -GSASTGDLNEASLAATVEQACAIARHTEDDPAAGLAEAALMATDFPDLDSWHPWALQAD 139
Query: 141 DAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIA 200
+A +A CEN ++ I N++ V++ QS + ANSHGF + H + + IA
Sbjct: 140 EAVDLALACENAGREADAQIRNSDGASVSSMQSLSVYANSHGFFGRERGTHHSVGCALIA 199
Query: 201 IKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFE 260
+G MQRD WY+S + L++ ++G AA+RT++RL+ + ++T PVLF +A
Sbjct: 200 GQGDGMQRDGWYTSALAREDLEEVGLVGRRAAERTVARLQPRSMATGSMPVLFAPEVARS 259
Query: 261 LLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQK 320
L+ +SG +LYR+++FL+DS+G+++F +QI E PH+ S++FD +GV T+
Sbjct: 260 LVGHLLSAVSGGALYRQASFLLDSVGQQLFPDWMQIEELPHLRRGLRSAAFDGDGVATRA 319
Query: 321 RLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGL 380
+V++G++Q Y L +YSA+KLG++TT N+GG H+L + +N + +L+E+ ++M GL
Sbjct: 320 SALVRDGVLQRYVLGSYSARKLGLQTTANAGGVHNLQLAAN----AGSLQEIARQMGDGL 375
Query: 381 LVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLT 440
LVTELMG G+N +TGDYS+GA G+ +ENG+IQY V+ ITI+G L+ MF I A+GSDV
Sbjct: 376 LVTELMGQGVNGVTGDYSRGAGGFRVENGEIQYPVDGITIAGNLREMFSSIEAVGSDVDP 435
Query: 441 RNSNTSGSILIENMIIAG 458
R+ +GSIL+ M IAG
Sbjct: 436 RSHIRTGSILLGRMTIAG 453
>gi|422644471|ref|ZP_16707609.1| pmbA protein [Pseudomonas syringae pv. maculicola str. ES4326]
gi|330958023|gb|EGH58283.1| pmbA protein [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 448
Score = 347 bits (889), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 177/442 (40%), Positives = 271/442 (61%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+
Sbjct: 14 ELQEQVEQIIAEARRQGASACEVAVSVDQGLSTSVRQREVETVEFNRDQGFGITLYVGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS +++ +T+ AA IA T+ D +GL D + +DF LY W
Sbjct: 74 K----GSASTSATGAEAIRETVAAALAIAEHTSEDESSGLADAALMAKETMDFDLYHAWD 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + A A CE AF +S I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 130 ITPEQAIEKALICEAAAFAADSRIKNADGTTLNTHQGCRVYGNSNGFIGGYASTRHSLSC 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N L E IG AA+R SRL A+ + T + PVLF A
Sbjct: 190 VMIAEGEGQMQRDYWYDVNRKGPLLADAESIGRKAAQRAASRLGARPVPTCEVPVLFAAE 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L F ISG +LYRKS+FL +LG+++F + I E PH++ + GSS+FD++G+
Sbjct: 250 LAGGLFGSFLGAISGGNLYRKSSFLEGTLGQRLFPEWMTIDERPHLMHAMGSSAFDSDGL 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V G + Y LSTYS +KLGM +T N+GG H+L + T S++ ++++M
Sbjct: 310 ATYAKPFVDKGDLVSYVLSTYSGRKLGMPSTANAGGVHNLFV----THGSEDQDALIRRM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GS
Sbjct: 366 GRGLLVTELMGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGS 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GS+LI+ M++AG
Sbjct: 426 DLELRSNIRTGSVLIKRMMVAG 447
>gi|26987678|ref|NP_743103.1| pmbA protein [Pseudomonas putida KT2440]
gi|24982363|gb|AAN66567.1|AE016285_5 pmbA protein [Pseudomonas putida KT2440]
Length = 452
Score = 347 bits (889), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 268/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 19 LQEQVEAIIAEARRQGASACEVAVSLEQGLSTTVRQREVETVEFNRDQGFGITLYVGQRK 78
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IAR T+ D +GL D + D LY W +
Sbjct: 79 ----GSASTSASGPEAIRETVAAALAIARHTSEDECSGLADAALMAREIPDLDLYHDWDI 134
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ A +A CE AF+ + I+N + T + T Q + NSHGF+ GY ++H +S
Sbjct: 135 EPEKAIEMALACEAAAFDADPRILNADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSCV 194
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 195 MIAEGDGQMQRDYWYDVNRQGNLLADPSSIGLRAAQRAASRLGARPVPTCEVPVLFSAEL 254
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL ++G+++F S + + E PHI + GS++FD +G+
Sbjct: 255 AGGLFGSFLSAISGGNLYRKSSFLEGTIGQRLFPSWLTLDERPHIPRALGSAAFDGDGLA 314
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V G + Y L TYS +KLG+ +T NSGG H+L + + ++ ++++M
Sbjct: 315 TYAKPFVDKGELVSYLLGTYSGRKLGLPSTANSGGVHNLFV----SHGVEDQAALIRRMG 370
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MF+QIVAIGSD
Sbjct: 371 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQHAVQEVTIAGNMKDMFQQIVAIGSD 430
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ TR++ +GS+LIE M +AG
Sbjct: 431 LETRSNIHTGSVLIERMTVAG 451
>gi|397697809|ref|YP_006535692.1| pmbA protein [Pseudomonas putida DOT-T1E]
gi|397334539|gb|AFO50898.1| pmbA protein [Pseudomonas putida DOT-T1E]
Length = 448
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 268/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEAIIAEARRQGASACEVAVSLEQGLSTTVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IAR T+ D +GL D + D LY W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIARHTSEDECSGLADAALMAREIPDLDLYHDWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ A +A CE AF+ + I+N + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 EPEKAIEMALACEAAAFDADPRILNADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEGDGQMQRDYWYDVNRQGNLLADPSSIGVRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL ++G+++F S + + E PHI + GS++FD +G+
Sbjct: 251 AGGLFGSFLSAISGGNLYRKSSFLEGTIGQRLFPSWLTLDERPHIPRALGSAAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V G + Y L TYS +KLG+ +T NSGG H+L + + ++ ++++M
Sbjct: 311 TYAKPFVDKGELVSYLLGTYSGRKLGLPSTANSGGVHNLFV----SHGVEDQAALIRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MF+QIVAIGSD
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQHAVQEVTIAGNMKDMFQQIVAIGSD 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ TR++ +GS+LIE M +AG
Sbjct: 427 LETRSNIHTGSVLIERMTVAG 447
>gi|397171422|ref|ZP_10494828.1| hypothetical protein AEST_25940 [Alishewanella aestuarii B11]
gi|396086957|gb|EJI84561.1| hypothetical protein AEST_25940 [Alishewanella aestuarii B11]
Length = 446
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 176/443 (39%), Positives = 273/443 (61%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+E ++ +L +AKK+GAS + + G SV R G+++ +E N D + + +Y
Sbjct: 11 AEVKEAVSQVLAHAKKLGASSAEASMSRTRGLSVETRHGEVETVEFNQDGGLGISLYFGQ 70
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
K G++ST+D ++L T+ AA +IAR+T+ D AG+ D + LE NP + LY P
Sbjct: 71 RK----GSASTADLSPQALKRTVEAAADIARYTSEDPHAGVADASWLEFNPPELDLYYPD 126
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
+S + A ++ E AF +S I N+E +T Q + NSHG + GYP S+H S
Sbjct: 127 SISTEQAIVLCAAAEEAAFAEDSRITNSEGASFSTHQGLKVYGNSHGQLVGYPSSRHSFS 186
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I G +MQRD Y+ L P +G AA+ T++RL+ +K+ T+K PVLF A
Sbjct: 187 CVVIGEAGDDMQRDYSYTVARRYADLLDPRQVGREAARETVARLQPRKVPTQKVPVLFRA 246
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L ISG S+YRKS+FL+D +G++I + + I+E PH+ + SS FD+EG
Sbjct: 247 DIASSLFGHLVSAISGGSIYRKSSFLLDKVGQQIMAPGLTILEKPHLNQALASSPFDSEG 306
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
VKT+ V++ GI+ Y ++YSA+KLGM +TG++GG H+ ++ S++L + ++
Sbjct: 307 VKTRDLAVIEQGILTTYLTTSYSARKLGMASTGHAGGIHNWLV----QHGSEDLLALCRQ 362
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M GLLVTELMG G+N +TGDYS+GA G+W+E+G+IQ+ V E+TI+G L+++F IVA+G
Sbjct: 363 MGKGLLVTELMGQGVNTVTGDYSRGASGFWVEHGEIQFPVAEVTIAGNLKDIFMNIVAVG 422
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
+DV R +GS+L+ M +AG
Sbjct: 423 NDVDRRGGVHTGSVLVSQMQLAG 445
>gi|431800961|ref|YP_007227864.1| C69 family peptidase [Pseudomonas putida HB3267]
gi|430791726|gb|AGA71921.1| C69 family peptidase [Pseudomonas putida HB3267]
Length = 448
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 173/441 (39%), Positives = 269/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEAIIAEARRQGASACEVAVSLEQGLSTTVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IAR T+ D +GL D + + D LY W L
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIARHTSEDECSGLADAALMARDIPDLDLYHDWNL 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ A +A CE AF+ + I+N + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 EPEKAIEMALACEAAAFDADPRILNADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEGDGQMQRDYWYDVNRQGNLLADPRSIGMRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL ++G+++F + + + E PHI + GS++FD +G+
Sbjct: 251 AGGLFGSFLSAISGGNLYRKSSFLEGTIGQRLFPTWLTLDERPHIPRALGSAAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V G + Y L TYS +KLG+ +T N+GG H+L + + ++ ++++M
Sbjct: 311 TYSKPFVDKGELVSYLLGTYSGRKLGLPSTANAGGVHNLFV----SHGVEDQAALIRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MF+QIVAIGSD
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQHAVQEVTIAGNMKDMFQQIVAIGSD 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ TR++ +GS+LIE M +AG
Sbjct: 427 LETRSNIHTGSVLIERMTVAG 447
>gi|21243492|ref|NP_643074.1| PmbA protein [Xanthomonas axonopodis pv. citri str. 306]
gi|21109052|gb|AAM37610.1| PmbA protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 455
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 176/441 (39%), Positives = 266/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++Q +L A+ GA+ + + +E G V VR G ++ +E D+ + V +Y GK
Sbjct: 21 LTDISQRLLERARAAGATQAEVSCSEERGLDVNVRLGDVETVESTRDRGIAVTVYF--GK 78
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G++ST+D + SL T+ A IARFT D AGL D + + + PW L
Sbjct: 79 R--KGSASTADLQESSLESTVAQACAIARFTEDDVAAGLADPELMAREFPELDSWHPWAL 136
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A +A CE + ++ I N++ +T S + ANSHGF+ + H IS +
Sbjct: 137 DADTAVDLALACETAGRDADARISNSDGASASTGLSLSVYANSHGFVGRERGTHHSISCA 196
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD WYSS + L+ P+ IG +AA RT++RL+ + + T + PVLF +
Sbjct: 197 LIAGQGDGMQRDGWYSSALAREDLEAPDAIGRHAAARTVARLQPRSLPTGQLPVLFAPEV 256
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G K+F I E PH+ S++FD EGV
Sbjct: 257 ARSLVGHLLGAVSGGALYRRASFLLDSVGSKLFPDWFNIEELPHLRRGLRSAAFDGEGVA 316
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T++ +V +G++Q Y L +YSA+KLG++TT N+GG H+L + +N + +L M+ M+
Sbjct: 317 TRRSALVTDGVLQRYVLGSYSARKLGLQTTANAGGVHNLQVTAN----AGDLASMIAGMS 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG+G+N +TGDYS+GA G+WIENG I Y V+ +TI+G L++MF I A+GSD
Sbjct: 373 RGLLVTELMGNGVNPVTGDYSRGAGGFWIENGVIAYPVDGLTIAGNLRDMFAGIEAVGSD 432
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ GS+LI M +AG
Sbjct: 433 VDPRSHVKIGSVLINRMTVAG 453
>gi|395447392|ref|YP_006387645.1| pmbA protein [Pseudomonas putida ND6]
gi|388561389|gb|AFK70530.1| pmbA protein [Pseudomonas putida ND6]
Length = 452
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 268/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 19 LQEQVEAIIAEARRQGASACEVAVSLEQGLSTTVRQREVETVEFNRDQGFGITLYVGQRK 78
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IAR T+ D +GL D + D LY W +
Sbjct: 79 ----GSASTSASGPEAIRETVAAALAIARHTSEDECSGLADAALMAREIPDLDLYHDWDI 134
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ A +A CE AF+ + I+N + T + T Q + NSHGF+ GY ++H +S
Sbjct: 135 EPEKAIEMALACEAAAFDADPRILNADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSCV 194
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 195 MIAEGNGQMQRDYWYDVNRQGNLLADPSSIGMRAAQRAASRLGARPVPTCEVPVLFSAEL 254
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL ++G+++F S + + E PHI + GS++FD +G+
Sbjct: 255 AGGLFGSFLSAISGGNLYRKSSFLEGTIGQRLFPSWLTLDERPHIPRALGSAAFDGDGLA 314
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V G + Y L TYS +KLG+ +T NSGG H+L + + ++ ++++M
Sbjct: 315 TYAKPFVDKGELVSYLLGTYSGRKLGLPSTANSGGVHNLFV----SHGVEDQAALIRRMG 370
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MF+QIVAIGSD
Sbjct: 371 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQHAVQEVTIAGNMKDMFQQIVAIGSD 430
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ TR++ +GS+LIE M +AG
Sbjct: 431 LETRSNIHTGSVLIERMTVAG 451
>gi|254524755|ref|ZP_05136810.1| PmbA protein [Stenotrophomonas sp. SKA14]
gi|219722346|gb|EED40871.1| PmbA protein [Stenotrophomonas sp. SKA14]
Length = 455
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 272/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
L+Q +L+ A+ +GAS + + +E G V VR G+++ ++ D+ + V +Y GK
Sbjct: 21 LADLSQQLLDRARALGASQAEVSCSEDRGLEVNVRLGEVETVQSTRDRGIAVTVYF--GK 78
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G++ST D + SL T+ A IAR T D AGL + + + D + PW L
Sbjct: 79 R--KGSASTGDLNEASLAATVEQACAIARHTEDDPAAGLAEAALMATDFPDLDGWHPWAL 136
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D+A +A CEN N+ I N++ V++ QS + ANSHGF+ + H + +
Sbjct: 137 QADEAVDLALACENAGREANAEIRNSDGASVSSMQSLSVYANSHGFIGRERGTHHSVGCA 196
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA G MQRD WY+S + L+ +G AA+RT++RL+ + ++T PVLF +
Sbjct: 197 LIAGLGDGMQRDGWYTSALAREDLEDVGQVGRQAAERTVARLRPRSMATGSMPVLFAPEV 256
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G+++F +QI E PH+ S++FD +GV
Sbjct: 257 ARSLVGHLLSAVSGGALYRQASFLLDSVGQRLFPEWMQIEELPHLRRGLRSAAFDGDGVA 316
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T+ +V++G++Q Y L +YSA+KLG++TT N+GG H+L + +N + +L+E+ ++M
Sbjct: 317 TRASALVRDGVLQRYVLGSYSARKLGLQTTANAGGVHNLQLAAN----AGSLQEIARQMG 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+ +ENG+IQY V+ ITI+G L+ MF I A+GSD
Sbjct: 373 DGLLVTELMGQGVNGVTGDYSRGAGGFRVENGEIQYPVDGITIAGNLREMFSSIEAVGSD 432
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ +GSIL+ M IAG
Sbjct: 433 VDPRSHVRTGSILLGRMTIAG 453
>gi|418516414|ref|ZP_13082588.1| PmbA protein [Xanthomonas axonopodis pv. malvacearum str. GSPB1386]
gi|418519721|ref|ZP_13085773.1| PmbA protein [Xanthomonas axonopodis pv. malvacearum str. GSPB2388]
gi|410705165|gb|EKQ63644.1| PmbA protein [Xanthomonas axonopodis pv. malvacearum str. GSPB2388]
gi|410706953|gb|EKQ65409.1| PmbA protein [Xanthomonas axonopodis pv. malvacearum str. GSPB1386]
Length = 455
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 176/441 (39%), Positives = 265/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++Q +L A+ GA+ + + +E G V VR G ++ +E D+ + V +Y GK
Sbjct: 21 LTDISQRLLERARAAGATQAEVSCSEERGLDVNVRLGDVETVESTRDRGIAVTVYF--GK 78
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G++ST+D SL T+ A IARFT D AGL D + + + PW L
Sbjct: 79 R--KGSASTADLQASSLESTVAQACAIARFTEDDVAAGLADPELMAREFPELDSWHPWAL 136
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A +A CE + ++ I N++ +T S + ANSHGF+ + H IS +
Sbjct: 137 DADTAVDLALACETAGRDADARISNSDGASASTGLSLSVYANSHGFVGRERGTHHSISCA 196
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD WYSS + L+ P+ IG +AA RT++RL+ + + T + PVLF +
Sbjct: 197 LIAGQGDGMQRDGWYSSALAREDLEAPDAIGRHAAARTVARLQPRSLPTGQLPVLFAPEV 256
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G K+F I E PH+ S++FD EGV
Sbjct: 257 ARSLVGHLLGAVSGGALYRRASFLLDSVGSKLFPDWFNIEELPHLRRGLRSAAFDGEGVA 316
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T++ +V +G++Q Y L +YSA+KLG++TT N+GG H+L + +N + +L M+ M+
Sbjct: 317 TRRSALVTDGVLQRYVLGSYSARKLGLRTTANAGGVHNLQVTAN----AGDLASMIAGMS 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG+G+N +TGDYS+GA G+WIENG I Y V+ +TI+G L++MF I A+GSD
Sbjct: 373 RGLLVTELMGNGVNPVTGDYSRGAGGFWIENGVIAYPVDGLTIAGNLRDMFAGIEAVGSD 432
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ GS+LI M +AG
Sbjct: 433 VDPRSHVKIGSVLINRMTVAG 453
>gi|422629099|ref|ZP_16694305.1| peptidase U62, modulator of DNA gyrase [Pseudomonas syringae pv.
pisi str. 1704B]
gi|440722165|ref|ZP_20902548.1| C69 family peptidase [Pseudomonas syringae BRIP34876]
gi|440725877|ref|ZP_20906137.1| C69 family peptidase [Pseudomonas syringae BRIP34881]
gi|443642389|ref|ZP_21126239.1| Putative Zn-dependent protease/modulator of DNA gyrase, TldE/PmbA
family [Pseudomonas syringae pv. syringae B64]
gi|330937979|gb|EGH41762.1| peptidase U62, modulator of DNA gyrase [Pseudomonas syringae pv.
pisi str. 1704B]
gi|440361694|gb|ELP98911.1| C69 family peptidase [Pseudomonas syringae BRIP34876]
gi|440367764|gb|ELQ04819.1| C69 family peptidase [Pseudomonas syringae BRIP34881]
gi|443282406|gb|ELS41411.1| Putative Zn-dependent protease/modulator of DNA gyrase, TldE/PmbA
family [Pseudomonas syringae pv. syringae B64]
Length = 448
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 178/442 (40%), Positives = 269/442 (60%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+
Sbjct: 14 ELQEQVEQIIAEARRQGASACEVAVSVDQGLSTSVRQREVETVEFNRDQGFGITLYVGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++ +T+ AA IA T+ D +GL D + +DF LY W
Sbjct: 74 K----GSASTSATGADAIRETVAAALAIAEHTSEDESSGLADAALMAKEVMDFDLYHTWD 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + A A CE AF+ +S I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 130 ITPEQAIEKALLCEAAAFDADSRIKNADGTTLNTHQGCRVYGNSNGFIGGYASTRHSLSC 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L + IG AA R SRL A+ + T + PVLF A
Sbjct: 190 VMIAEGEGQMQRDYWYDVNRQGELLADAQSIGRKAALRAASRLGARPVPTCEVPVLFAAE 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L F ISG +LYRKS+FL +LG+++F + I E PH+ + GSS+FD++G+
Sbjct: 250 LAGGLFGSFLGAISGGTLYRKSSFLEGALGQRLFPEWMTIDERPHLKHAMGSSAFDSDGL 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V G + Y LSTYS +KLGM +T N+GG H+L + T SD+ ++++M
Sbjct: 310 ATFAKPFVAGGDLVSYVLSTYSGRKLGMPSTANAGGVHNLFV----THGSDDQAALIRRM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GS
Sbjct: 366 GRGLLVTELMGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGS 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GS+LIE M +AG
Sbjct: 426 DLELRSNIRTGSVLIERMTVAG 447
>gi|66047381|ref|YP_237222.1| C69 family peptidase [Pseudomonas syringae pv. syringae B728a]
gi|63258088|gb|AAY39184.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Pseudomonas syringae pv. syringae B728a]
Length = 448
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 177/442 (40%), Positives = 270/442 (61%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+
Sbjct: 14 ELQEQVEQIIAEARRQGASACEVAVSVDQGLSTSVRQREVETVEFNRDQGFGITLYVGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++ +T+ AA IA T+ D +GL D + +DF LY W
Sbjct: 74 K----GSASTSATGADAIRETVAAALAIAEHTSEDESSGLADAALMAKEVMDFDLYHTWD 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + A A CE AF+ +S I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 130 ITPEQAIEKALLCEAAAFDADSRIKNADGTTLNTHQGCRVYGNSNGFIGGYASTRHSLSC 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L + IG AA R SRL A+ + T + PVLF A
Sbjct: 190 VMIAEGEGQMQRDYWYDVNRQGELLADAQSIGRKAALRAASRLGARPVPTCEVPVLFAAE 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L F ISG +LYRKS+FL +LG+++F + I E PH+ + GSS+FD++G+
Sbjct: 250 LAGGLFGSFLGAISGGTLYRKSSFLEGALGQRLFPEWMTIDERPHLRHAMGSSAFDSDGL 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V G + Y LSTYS +KLGM +T N+GG H+L + + SD+ ++++M
Sbjct: 310 ATFAKPFVAGGDLVSYVLSTYSGRKLGMPSTANAGGVHNLFV----SHGSDDQAALIRRM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GS
Sbjct: 366 GRGLLVTELMGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGS 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GS+LIE M++AG
Sbjct: 426 DLELRSNIRTGSVLIERMMVAG 447
>gi|422590204|ref|ZP_16664861.1| pmbA protein [Pseudomonas syringae pv. morsprunorum str. M302280]
gi|330877201|gb|EGH11350.1| pmbA protein [Pseudomonas syringae pv. morsprunorum str. M302280]
Length = 448
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 178/442 (40%), Positives = 271/442 (61%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+
Sbjct: 14 ELQEQVEQIIAEARRQGASACEVAVSVDQGLSTSVRQREVETVEFNRDQGFGITLYVGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++ +T+ AA IA T+ D +GL D + +DF LY W
Sbjct: 74 K----GSASTSATGADAIRETVAAALAIAEHTSEDESSGLADAALMAKEVMDFDLYHTWD 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + A A CE AF+ +S I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 130 ITPEQAIEKALICEAAAFDADSRIKNADGTTLNTHQGCRVYGNSNGFIGGYASTRHSLSC 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L + IG AA R SRL A+ + T + PVLF A
Sbjct: 190 VMIAEGEGQMQRDYWYDVNRKGELLVDAQSIGRKAALRAASRLGARPVPTCEVPVLFAAE 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L F ISG +LYRKS+FL +LG+++F + I E PH+ + GSS+FD++G+
Sbjct: 250 LAGGLFGSFLGAISGGNLYRKSSFLEGTLGQRLFPEWMTIDERPHLKHAMGSSAFDSDGL 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+NG + Y LSTYS +KLGM +T N+GG H+L + T S++ ++++M
Sbjct: 310 ATYAKPFVENGDLVSYILSTYSGRKLGMPSTANAGGVHNLFV----THGSEDQAALIRRM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GS
Sbjct: 366 GRGLLVTELMGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGS 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GS+LIE M +AG
Sbjct: 426 DLELRSNIRTGSVLIERMTVAG 447
>gi|422637883|ref|ZP_16701315.1| pmbA protein [Pseudomonas syringae Cit 7]
gi|440742376|ref|ZP_20921701.1| pmbA protein [Pseudomonas syringae BRIP39023]
gi|330950279|gb|EGH50539.1| pmbA protein [Pseudomonas syringae Cit 7]
gi|440377213|gb|ELQ13862.1| pmbA protein [Pseudomonas syringae BRIP39023]
Length = 448
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 178/442 (40%), Positives = 269/442 (60%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+
Sbjct: 14 ELQEQVEQIIAEARRQGASACEVAVSVDQGLSTSVRQREVETVEFNRDQGFGITLYVGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++ +T+ AA IA T+ D +GL D + +DF LY W
Sbjct: 74 K----GSASTSATGADAIRETVAAALAIAEHTSEDESSGLADAALMAKEVMDFDLYHTWD 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + A A CE AF+ +S I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 130 ITPEQAIEKALICEAAAFDADSRIKNADGTTLNTHQGCRVYGNSNGFIGGYASTRHSLSC 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L + IG AA R SRL A+ + T + PVLF A
Sbjct: 190 VMIAEGEGQMQRDYWYDVNRQGELLADAQSIGRKAALRAASRLGARPVPTCEVPVLFAAE 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L F ISG +LYRKS+FL +LG+++F + I E PH+ + GSS+FD++G+
Sbjct: 250 LAGGLFGSFLGAISGGTLYRKSSFLEGALGQRLFPEWMTIDERPHLKHAMGSSAFDSDGL 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V G + Y LSTYS +KLGM +T N+GG H+L + T SD+ ++++M
Sbjct: 310 ATFAKPFVAGGDLVSYVLSTYSGRKLGMPSTANAGGVHNLFV----THGSDDQAALIRRM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GS
Sbjct: 366 GRGLLVTELMGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGS 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GS+LIE M +AG
Sbjct: 426 DLELRSNIRTGSVLIERMTVAG 447
>gi|424073705|ref|ZP_17811120.1| pmbA protein [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|407995517|gb|EKG36040.1| pmbA protein [Pseudomonas syringae pv. avellanae str. ISPaVe037]
Length = 452
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 178/442 (40%), Positives = 269/442 (60%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+
Sbjct: 18 ELQEQVEQIIAEARRQGASACEVAVSVDQGLSTSVRQREVETVEFNRDQGFGITLYVGQR 77
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++ +T+ AA IA T+ D +GL D + +DF LY W
Sbjct: 78 K----GSASTSATGADAIRETVAAALAIAEHTSEDESSGLADAALMAKEVMDFDLYHTWD 133
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + A A CE AF+ +S I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 134 ITPEQAIEKALLCEAAAFDADSRIKNADGTTLNTHQGCRVYGNSNGFIGGYASTRHSLSC 193
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N L + IG AA R SRL A+ + T + PVLF A
Sbjct: 194 VMIAEGEGQMQRDYWYDVNRKGDLLADAQSIGRKAALRAASRLGARPVPTCEVPVLFAAE 253
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L F ISG +LYRKS+FL +LG+++F + I E PH+ + GSS+FD++G+
Sbjct: 254 LAGGLFGSFLGAISGGTLYRKSSFLEGALGQRLFPEWMTIDERPHLKHAMGSSAFDSDGL 313
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+ G + Y LSTYS +KLGM +T N+GG H+L + T SD+ ++++M
Sbjct: 314 ATFAKPFVEGGDLVSYVLSTYSGRKLGMPSTANAGGVHNLFV----THGSDDQAALIRRM 369
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GS
Sbjct: 370 GRGLLVTELMGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGS 429
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GS+LIE M +AG
Sbjct: 430 DLELRSNIRTGSVLIERMTVAG 451
>gi|422668757|ref|ZP_16728611.1| pmbA protein [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|330981120|gb|EGH79223.1| pmbA protein [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 448
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/442 (40%), Positives = 270/442 (61%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+
Sbjct: 14 ELQEQVEQIIAEARRQGASACEVAVSVDQGLSTSVRQREVETVEFNRDQGFGITLYVGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++ +T+ AA IA T+ D +GL D + +DF LY W
Sbjct: 74 K----GSASTSATGADAIRETVAAALAIAEHTSEDESSGLADAALMAKEVMDFDLYHTWD 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + + A CE AF+ +S I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 130 ITPEQSIEKALLCEAAAFDADSRIKNADGTTLNTHQGCRVYGNSNGFIGGYASTRHSLSC 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L + IG AA R SRL A+ + T + PVLF A
Sbjct: 190 VMIAEGEGQMQRDYWYDVNRQGELLADAQSIGRKAALRAASRLGARPVPTCEVPVLFAAE 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L F ISG +LYRKS+FL +LG+++F + I E PH+ + GSS+FD++G+
Sbjct: 250 LAGGLFGSFLGAISGGTLYRKSSFLEGALGQRLFPEWMTIDERPHLKHAMGSSAFDSDGL 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+ G + Y LSTYS +KLGM +T N+GG H+L + T SD+ ++++M
Sbjct: 310 ATFAKPFVEGGDLVSYVLSTYSGRKLGMPSTANAGGVHNLFV----THGSDDQAALIRRM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GS
Sbjct: 366 GRGLLVTELMGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGS 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GS+LIE M +AG
Sbjct: 426 DLELRSNIRTGSVLIERMTVAG 447
>gi|422300004|ref|ZP_16387547.1| pmbA protein [Pseudomonas avellanae BPIC 631]
gi|407987929|gb|EKG30599.1| pmbA protein [Pseudomonas avellanae BPIC 631]
Length = 452
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 178/442 (40%), Positives = 271/442 (61%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+
Sbjct: 18 ELQEQVEQIIAEARRQGASACEVAVSVDQGLSTSVRQREVETVEFNRDQGFGITLYVGQR 77
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++ +T+ AA IA T+ D +GL D + +DF LY W
Sbjct: 78 K----GSASTSATGADAIRETVAAALAIAEHTSEDESSGLADAALMAKEVMDFDLYHTWD 133
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + A A CE AF+ +S I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 134 ITPEQAIEKALICEAAAFDADSRIKNADGTTLNTHQGCRVYGNSNGFIGGYASTRHSLSC 193
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L + IG AA R SRL A+ + T + PVLF A
Sbjct: 194 VMIAEGEGQMQRDYWYDVNRKGELLVDAQSIGRKAALRAASRLGARPVPTCEVPVLFAAE 253
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L F ISG +LYRKS+FL +LG+++F + I E PH+ + GSS+FD++G+
Sbjct: 254 LAGGLFGSFLGAISGGNLYRKSSFLEGTLGQRLFPEWMTIDERPHLKHAMGSSAFDSDGL 313
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+NG + Y LSTYS +KLGM +T N+GG H+L + T S++ ++++M
Sbjct: 314 ATYAKPFVENGDLVSYILSTYSGRKLGMPSTANAGGVHNLFV----THGSEDQAALIRRM 369
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GS
Sbjct: 370 GRGLLVTELMGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGS 429
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GS+LIE M +AG
Sbjct: 430 DLELRSNIRTGSVLIERMTVAG 451
>gi|390993163|ref|ZP_10263355.1| modulator of DNA gyrase family protein [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|372552097|emb|CCF70330.1| modulator of DNA gyrase family protein [Xanthomonas axonopodis pv.
punicae str. LMG 859]
Length = 455
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 266/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++Q +L A+ GA+ + + +E G V VR G ++ +E D+ + V +Y GK
Sbjct: 21 LTDISQRLLERARAAGATQAEVSCSEERGLDVNVRLGDVETVESTRDRGIAVTVYF--GK 78
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G++ST+D + SL T+ A IARFT D AGL D + + + PW L
Sbjct: 79 R--KGSASTADLQESSLESTVAQACAIARFTEDDVAAGLADPELMAREFPELDSWHPWAL 136
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A +A CE + ++ I N++ +T S + ANSHGF+ + H IS +
Sbjct: 137 DADTAVDLALACETAGRDADARISNSDGASASTGLSLSVYANSHGFVGRERGTHHSISCA 196
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD WYSS + L+ P+ IG +AA RT++RL+ + + T + PVLF +
Sbjct: 197 LIAGQGDGMQRDGWYSSALAREDLEAPDAIGRHAAARTVARLQPRSLPTGQLPVLFAPEV 256
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G K+F I E PH+ S++FD EGV
Sbjct: 257 ARSLVGHLLGAVSGGALYRRASFLLDSVGSKLFPDWFNIEELPHLRRGLRSAAFDGEGVA 316
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T++ ++ +G++Q Y L +YSA+KLG++TT N+GG H+L + +N + +L M+ M+
Sbjct: 317 TRRSALITDGVLQRYVLGSYSARKLGLQTTANAGGVHNLQVTAN----AGDLASMIAGMS 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG+G+N +TGDYS+GA G+WIENG I Y V+ +TI+G L++MF I A+GSD
Sbjct: 373 RGLLVTELMGNGVNPVTGDYSRGAGGFWIENGVIAYPVDGLTIAGNLRDMFAGIEAVGSD 432
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ GS+LI M +AG
Sbjct: 433 VDPRSHVKIGSVLINRMTVAG 453
>gi|302185322|ref|ZP_07261995.1| pmbA protein [Pseudomonas syringae pv. syringae 642]
Length = 448
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/442 (40%), Positives = 270/442 (61%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+
Sbjct: 14 ELQEQVEQIIAEARRQGASACEVAVSVDQGLSTSVRQREVETVEFNRDQGFGITLYVGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++ +T+ AA IA T+ D +GL D + +DF LY W
Sbjct: 74 K----GSASTSATGADAIRETVAAALAIAEHTSEDESSGLADAALMAKEVMDFDLYHTWD 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + A A CE AF+ +S I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 130 ITPEQAIEKALLCEAAAFDADSRIKNADGTTLNTHQGCRVYGNSNGFIGGYASTRHSLSC 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L + IG AA R SRL A+ + T + PVLF A
Sbjct: 190 VMIAEGEGQMQRDYWYDVNRQGELLADAQSIGRKAALRAASRLGARPVPTCEVPVLFAAE 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L F ISG +LYRKS+FL +LG+++F + I E PH+ + GSS+FD++G+
Sbjct: 250 LAGGLFGSFLGAISGGTLYRKSSFLEGALGQRLFPEWMTIDERPHLKHAMGSSAFDSDGL 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+ G + Y LSTYS +KLGM +T N+GG H+L + T S++ ++++M
Sbjct: 310 ATFAKPFVEGGDLVSYVLSTYSGRKLGMPSTANAGGVHNLFV----THGSEDQAALIRRM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GS
Sbjct: 366 GRGLLVTELMGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGS 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GS+LIE M +AG
Sbjct: 426 DLELRSNIRTGSVLIERMTVAG 447
>gi|319787812|ref|YP_004147287.1| peptidase U62 modulator of DNA gyrase [Pseudoxanthomonas suwonensis
11-1]
gi|317466324|gb|ADV28056.1| peptidase U62 modulator of DNA gyrase [Pseudoxanthomonas suwonensis
11-1]
Length = 451
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 170/441 (38%), Positives = 269/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+L+Q +L A+ +GA+ + + +E G +V VR G+++ +E +ND+ + V +Y K
Sbjct: 17 LAELSQRLLARARALGATQAEVSCSEERGLNVSVRMGEVETVESSNDRGIAVTVYFGQRK 76
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST+D + SL T+ A IAR+T D AGL D + D + PW L
Sbjct: 77 ----GSASTADLHESSLEATVEQACAIARYTEDDEAAGLADAELMAREFPDLDTWHPWRL 132
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D+A +A CE + + N++ + +S + ANSHGF+ ++H + ++
Sbjct: 133 DADEAVELALACEAAGREADPRVANSDGASFGSGESLSVYANSHGFIGRERETQHSLGLA 192
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA G++MQRD WYS + L+ P IG AA+R +SRL+ + ++T + PVLF A +
Sbjct: 193 LIAGHGEQMQRDGWYSIGLAREDLETPVAIGRRAAERAVSRLQPRTVATGEYPVLFSAEV 252
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A LL +SG +LYRK++FL+DS+G ++F + I E P +L SS+FD +GV
Sbjct: 253 ARSLLGHLLGAVSGGALYRKASFLLDSVGTRLFPEWLSINERPLLLHGLRSSAFDADGVA 312
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T+ +V +G++ Y L +YSA+KLG++TT N+GG H+L + +N + +L EM + M
Sbjct: 313 TRDNPLVVDGVLHRYVLGSYSARKLGLQTTANAGGVHNLQVSAN----AGSLAEMARGMG 368
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+WIE+G++ + V+E+TI+G L+ MF I A+GS+
Sbjct: 369 RGLLVTELMGQGVNGVTGDYSRGAAGFWIEDGQVAFPVDELTIAGNLRTMFAAIEAVGSE 428
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ +G IL+ M +AG
Sbjct: 429 VDPRSHIRTGPILVGRMTVAG 449
>gi|294625516|ref|ZP_06704144.1| PmbA protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|294666076|ref|ZP_06731335.1| PmbA protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|292600185|gb|EFF44294.1| PmbA protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292604135|gb|EFF47527.1| PmbA protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 455
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 266/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++Q +L A+ GA+ + + +E G V VR G ++ +E D+ + V +Y GK
Sbjct: 21 LTDISQRLLERARAAGATQAEVSCSEERGLDVNVRLGDVETVESTRDRGIAVTVYF--GK 78
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G++ST+D SL T+ A IARFT D AGL D + + + PW L
Sbjct: 79 R--KGSASTADLQDSSLESTVAQACAIARFTEDDVAAGLADPELMAREFPELDSWHPWAL 136
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A +A CE + ++ I N++ +T S + ANSHGF+ + H IS +
Sbjct: 137 DADTAVDLALACETAGRDADARISNSDGASASTGLSLSVYANSHGFIGRERGTHHSISCA 196
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD WYSS + L+ P+ IG +AA+RT++RL+ + + T + PVLF +
Sbjct: 197 LIAGQGDGMQRDGWYSSALAREDLEAPDAIGRHAAERTVARLQPRSLPTGQLPVLFAPEV 256
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G K+F I E PH+ S++FD EGV
Sbjct: 257 ARSLVGHLLGAVSGGALYRRASFLLDSVGSKLFPDWFNIEELPHLRRGLRSAAFDGEGVA 316
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T++ ++ +G++Q Y L +YSA+KLG++TT N+GG H+L + +N + +L M+ M+
Sbjct: 317 TRRSALITDGVLQRYVLGSYSARKLGLQTTANAGGVHNLQVTAN----AGDLASMIAGMS 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG+G+N +TGDYS+GA G+WIENG I Y V+ +T++G L++MF I A+GSD
Sbjct: 373 RGLLVTELMGNGVNPVTGDYSRGAGGFWIENGVIAYPVDGLTVAGNLRDMFAGIEAVGSD 432
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ GS+LI M +AG
Sbjct: 433 VDPRSHVKIGSVLINRMTVAG 453
>gi|422596786|ref|ZP_16671065.1| pmbA protein [Pseudomonas syringae pv. lachrymans str. M301315]
gi|330987082|gb|EGH85185.1| pmbA protein [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 448
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 177/442 (40%), Positives = 270/442 (61%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+
Sbjct: 14 ELQEQVEQIIAEARRQGASACEVAVSVDQGLSTSVRQREVETVEFNRDQGFGITLYVGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++ +T+ AA IA T+ D +GL D + +DF LY W
Sbjct: 74 K----GSASTSATGADAIRETVAAALAIAEHTSEDESSGLADAALMAKEVMDFDLYHTWD 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + A A CE AF+ +S I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 130 ITPEQAIEKALTCEAAAFDADSRIKNADGTTLNTHQGCRVYGNSNGFVGGYASTRHSLSC 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L + IG AA R SRL A+ + T + PVLF A
Sbjct: 190 VMIAEGEGQMQRDYWYDVNRQGELLADAQSIGRKAALRAASRLGARPVPTCEVPVLFAAE 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L F ISG +LYRKS+FL +LG+++F + I E PH+ + GSS+FD++G+
Sbjct: 250 LAGGLFGSFLGAISGGNLYRKSSFLEGALGQRLFPEWMTIDERPHLKHAMGSSAFDSDGL 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+ G + Y LSTYS +KLGM +T N+GG H+L + T S++ ++++M
Sbjct: 310 ATFAKPFVEGGDLVSYVLSTYSGRKLGMPSTANAGGVHNLFV----THGSEDQAALIRRM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GS
Sbjct: 366 GRGLLVTELMGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGS 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GS+LIE M +AG
Sbjct: 426 DLELRSNIRTGSVLIERMTVAG 447
>gi|381171851|ref|ZP_09880990.1| modulator of DNA gyrase family protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380687680|emb|CCG37477.1| modulator of DNA gyrase family protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 455
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 266/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++Q +L A+ GA+ + + +E G V VR G ++ +E D+ + V +Y GK
Sbjct: 21 LTDISQRLLERARAAGATQAEVSCSEERGLDVNVRLGDVETVESTRDRGIAVTVYF--GK 78
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G++ST+D + SL T+ A IARFT D AGL D + + + PW L
Sbjct: 79 R--KGSASTADLQESSLESTVAQACAIARFTEDDVAAGLADPELMAREFPELDGWHPWAL 136
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A +A CE + ++ I N++ +T S + ANSHGF+ + H IS +
Sbjct: 137 DADTAVDLALACETAGRDADARISNSDGASASTGLSLSVYANSHGFVGRERGTHHSISCA 196
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD WYSS + L+ P+ IG +AA RT++RL+ + + T + PVLF +
Sbjct: 197 LIAGQGDGMQRDGWYSSALAREDLEAPDAIGRHAAARTVARLQPRSLPTGQLPVLFAPEV 256
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G K+F I E PH+ S++FD EGV
Sbjct: 257 ARSLVGHLLGAVSGGALYRRASFLLDSVGSKLFPDWFNIEELPHLRRGLRSAAFDGEGVA 316
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T++ ++ +G++Q Y L +YSA+KLG++TT N+GG H+L + +N + +L M+ M+
Sbjct: 317 TRRSALITDGVLQRYVLGSYSARKLGLQTTANAGGVHNLQVTAN----AGDLASMIAGMS 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG+G+N +TGDYS+GA G+WIENG I Y V+ +T++G L++MF I A+GSD
Sbjct: 373 RGLLVTELMGNGVNPVTGDYSRGAGGFWIENGVIAYPVDGLTVAGNLRDMFAGIEAVGSD 432
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ GS+LI M +AG
Sbjct: 433 VDPRSHVKIGSVLINRMTVAG 453
>gi|398845231|ref|ZP_10602273.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM84]
gi|398253774|gb|EJN38889.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM84]
Length = 448
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 173/441 (39%), Positives = 267/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEAIIAEARRQGASACEVAVSLEQGLSTTVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS ++ +T+ AA IA+ T+ D +GL D + D LY W +
Sbjct: 75 ----GSASTSASGPDAIRETVAAALAIAKHTSEDECSGLADAALMAREIPDLDLYHDWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ A +A CE AF+ + I+N + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 EPEQAIEMALTCEAAAFDADPRILNADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEGDGQMQRDYWYDVNRQGNLLADPRSIGLRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL ++G+++F S + + E PHI + GS++FD +G+
Sbjct: 251 AGGLFGSFLSAISGGNLYRKSSFLDGAMGQRLFPSWLTLDERPHIPRALGSAAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V G + Y L TYS +KLG+ +T N+GG H+L + T ++ ++++M
Sbjct: 311 TYAKPFVDKGELVSYLLGTYSGRKLGLPSTANAGGVHNLYV----THGVEDQAALIRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MF+QIVAIGSD
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQHAVQEVTIAGNMKDMFQQIVAIGSD 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ TR++ +GS+LIE M +AG
Sbjct: 427 LETRSNIHTGSVLIERMTVAG 447
>gi|170723434|ref|YP_001751122.1| peptidase U62 modulator of DNA gyrase [Pseudomonas putida W619]
gi|169761437|gb|ACA74753.1| peptidase U62 modulator of DNA gyrase [Pseudomonas putida W619]
Length = 448
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 176/441 (39%), Positives = 267/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ A + GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEAIIAEASRQGASACEVAVSLEQGLSTTVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IAR T+ D +GL D + D LY W L
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIARHTSEDECSGLADAALMAREIPDLDLYHDWDL 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ A +A CE AF+ + I+N + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 EPEKAIEMALACEAAAFDADPRILNADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N + L P IG AA R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEGEGQMQRDYWYDVNRQGQLLADPRSIGQRAALRAASRLGARPVKTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL ++G+++F S + + E PHI + GS++FD +G+
Sbjct: 251 AGGLFGSFLSAISGGNLYRKSSFLDGAIGQRLFPSWLTLDERPHIPRALGSAAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V G + Y L TYS +KLG+ +T NSGG H+L + T ++ ++++M
Sbjct: 311 TYAKPFVDKGELVSYLLGTYSGRKLGLPSTANSGGVHNLYV----THGIEDQAALIRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MF+QIVAIGSD
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQHAVQEVTIAGNMKDMFQQIVAIGSD 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ TR++ +GS+LIE M +AG
Sbjct: 427 LETRSNIHTGSVLIERMTVAG 447
>gi|237807038|ref|YP_002891478.1| peptidase U62 modulator of DNA gyrase [Tolumonas auensis DSM 9187]
gi|237499299|gb|ACQ91892.1| peptidase U62 modulator of DNA gyrase [Tolumonas auensis DSM 9187]
Length = 447
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 180/454 (39%), Positives = 276/454 (60%), Gaps = 8/454 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+ ++ + + + + +Q+ D L+ A+++GA + I ++ G SV R G+++ IE N D
Sbjct: 1 MNSQEQILQEQHKLEQVVTDALHIAQELGADTAEISISKQTGISVNTRGGEVENIEFNKD 60
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + IY +DG+K G+SST+D ++ I AA I+R+TA D+ AGL D +
Sbjct: 61 GALGIAIY-RDGRK---GSSSTADLSIGAIRRCIEAALEISRYTAVDSCAGLADRELMAW 116
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
+ + L P L + +A RCE A + + I +++ ++ + N+HGF+
Sbjct: 117 DAPELDLLYPVALEPEYGIELARRCELHALSLDKRIKQSDSGSFSSHHGIKVYGNTHGFV 176
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
GY S+H +S I + +MQRD YS+ + L PE I A RT+S L +KI
Sbjct: 177 KGYAASRHSLSCVLIGEQDGDMQRDYSYSTARELSDLWTPERIAEDAVSRTVSHLGGRKI 236
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
+T + PVLF A L ISG +LYRKSTFL+DSLG+++F + I E H+
Sbjct: 237 ATTEVPVLFLPEAANSLFGHLVSAISGGNLYRKSTFLLDSLGQQLFPDWLHINEFAHLPK 296
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
SS FD EGV+TQ R ++++G++Q Y L+ YSA+KLGM++TG++GG H+ +
Sbjct: 297 GLASSPFDGEGVRTQDRAIIQSGVLQTYLLTAYSARKLGMQSTGHAGGIHNWFV----EG 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
L +L++M TGL+V+ELMG G+N +TGDYS+GA G+W+ENG+I Y VEEITI+G L
Sbjct: 353 QGQTLDALLQQMGTGLVVSELMGQGVNIVTGDYSRGATGFWVENGQIVYPVEEITIAGNL 412
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+ MF+QIVA+G+D+ R S SGS+L+E M IAG
Sbjct: 413 KEMFRQIVAVGNDIDPRCSLQSGSVLLERMKIAG 446
>gi|348030600|ref|YP_004873286.1| pmbA protein [Glaciecola nitratireducens FR1064]
gi|347947943|gb|AEP31293.1| pmbA protein [Glaciecola nitratireducens FR1064]
Length = 443
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 185/443 (41%), Positives = 274/443 (61%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+E Q + D L A + GA+ + ++ G +V R +++ +E ND + + +++
Sbjct: 8 AEIQNVVDDALRLAIQKGATAAEASMSKVQGIAVSSRLKEVETVEFTNDGGLGIAVFV-- 65
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
GKK G++ST+D +L T+ A IA++T D+ AG+ D+ + + D LY P
Sbjct: 66 GKKK--GSASTADLSPAALRLTVEKAVEIAKYTNEDDCAGIADKEFIAADIPDLDLYHPI 123
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L +A E + +S IVN++ + N+HG +GY S++ +S
Sbjct: 124 ELDTQAGIKLAIEAETAGMDSDSKIVNSDGASYNANLGVRVYGNTHGINAGYASSRYSLS 183
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
IA G++MQR+ Y+ N + LD +G AAK T+SRL AKKI+T K PVLF
Sbjct: 184 CVLIAQDGEDMQRNYSYTMNREAHLLDSAYKVGIDAAKETLSRLGAKKINTAKVPVLFHR 243
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A E+ F ISG SLYR+S+FL+DSLG K+F + I E PH+L SS FDNEG
Sbjct: 244 DIASEIFGHFVSAISGGSLYRQSSFLLDSLGTKVFPDWLTINEKPHLLKGLASSPFDNEG 303
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+TQ +V++G++Q Y L++YSA+KL M+T G++GG H+ ++ S T SD KE+L+K
Sbjct: 304 VRTQDMTIVESGVLQHYLLTSYSARKLKMQTNGHAGGIHNWLLSS--TGESD--KELLEK 359
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGL+VTELMG G+N + GDYS+GA G+W+ENG IQY V EITI+G LQ+MF+ I+AIG
Sbjct: 360 MGTGLIVTELMGQGVNIVNGDYSRGAAGFWVENGIIQYPVHEITIAGNLQDMFQNIIAIG 419
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
++ R+S +GSILIE+M +AG
Sbjct: 420 AETELRSSIQTGSILIESMQVAG 442
>gi|431931913|ref|YP_007244959.1| Zn-dependent protease-like protein [Thioflavicoccus mobilis 8321]
gi|431830216|gb|AGA91329.1| putative Zn-dependent protease-like protein [Thioflavicoccus
mobilis 8321]
Length = 449
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 176/442 (39%), Positives = 268/442 (60%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
+ + + +L + + GA+ + + G V VR G+++ IE D + V +Y
Sbjct: 15 QLRDSVEAILTESARQGATAAEAAVSTRAGLEVAVRLGEVETIEHTRDNGLGVTVYFGHR 74
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STSD +L + + AA IAR+T D +A L D + D LY PW
Sbjct: 75 K----GSASTSDLSPAALREAVAAACAIARYTEEDPYAALADAERMARTVPDLDLYHPWS 130
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ +DA +A CE+ A + I N+E +++ + NSHGF+ GYP ++H +S
Sbjct: 131 ITPEDAVALAIACEDAARTHDPRITNSEGASLSSHWGIQVYGNSHGFIGGYPTTRHGLSC 190
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
+ I G MQRD W+S+ P+ L+Q +G AA++T++RL A+ I+TR+ PVLF+A
Sbjct: 191 AVIGETGGNMQRDYWWSTARAPEDLEQAAQVGRRAAEKTLARLGARPIATRQAPVLFQAE 250
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
+A LL I G+SLYR+++FLVD LG+ IF S + I E P + S+ FD +GV
Sbjct: 251 VAAGLLRQLIGAIQGSSLYRRASFLVDQLGEAIFPSFVHIHERPLLPRGLASAPFDGDGV 310
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + ++++GI+Q Y L +Y+A+KLGM+TTGN+GG +L I + + +L++M
Sbjct: 311 ATADKDLIRDGILQSYVLDSYAARKLGMETTGNAGGVRNLAIDMGEL----DRPALLREM 366
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
TGLLVTELMG G+N +TGDYS+GA G WIE G++++ VEEITI+G L+ MF +VA+G+
Sbjct: 367 GTGLLVTELMGHGVNLVTGDYSRGAAGLWIEGGEVKHPVEEITIAGNLKEMFAGVVAVGN 426
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D S +GS LI+NM IAG
Sbjct: 427 DCDFSGSTRTGSWLIDNMTIAG 448
>gi|380513724|ref|ZP_09857131.1| modulator of DNA gyrase [Xanthomonas sacchari NCPPB 4393]
Length = 454
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 168/441 (38%), Positives = 268/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+A+ +L A+ +GAS + + +E G V VR G ++ +E D+ + V +Y K
Sbjct: 20 LSDIAERLLARARALGASQAEVSCSEDRGLDVNVRLGAVETVESTRDRGIGVTVYFGQRK 79
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST+D + SL T+ A IAR+T D AGL + + DF + PW L
Sbjct: 80 ----GSASTADLHESSLEATVAQACAIARYTEDDVAAGLAEAALMAREQPDFDRWHPWPL 135
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
++A +A CE + ++ I N++ T +S + ANSHGF+ + H ++ +
Sbjct: 136 QAEEAIDLALACEAAGRDADARISNSDGASAGTSESLSVYANSHGFIGCERSTHHSLACT 195
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD WYSS + L++ IG AA+RT++RL+ + + T + PVLF +
Sbjct: 196 LIAGQGDGMQRDGWYSSALAREDLERASAIGRRAAERTVARLQPRSLPTGEVPVLFAPEM 255
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS G ++F I E PH+ S++FD EGV
Sbjct: 256 ARSLIGHLLGAVSGGALYRRASFLLDSAGTRLFPEWFAIDERPHLRRGLRSAAFDGEGVA 315
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T++ +V++G++Q Y L +YSA+KLG++TT N+GG H+L + +N +L+ +LK +
Sbjct: 316 TREAPLVRDGVLQRYVLGSYSARKLGLQTTANAGGVHNLQVAANAA----DLQAILKGLP 371
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVT+LMG+G+N +TGDYS+GA G+WIENG+I Y V+EITI+G L+ MF+ I A+G+D
Sbjct: 372 RGLLVTDLMGNGVNPVTGDYSRGAGGFWIENGEIAYPVDEITIAGNLRQMFQDIEAVGAD 431
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R+ G++L+ M +AG
Sbjct: 432 IDVRSHVHIGAVLVGRMTVAG 452
>gi|424069322|ref|ZP_17806768.1| pmbA protein [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|407994943|gb|EKG35495.1| pmbA protein [Pseudomonas syringae pv. avellanae str. ISPaVe013]
Length = 452
Score = 344 bits (882), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 177/442 (40%), Positives = 268/442 (60%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+
Sbjct: 18 ELQEQVEQIIAEARRQGASACEVAVSVDQGLSTSVRQREVETVEFNRDQGFGITLYVGQR 77
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++ +T+ AA IA T+ D +GL D + +DF LY W
Sbjct: 78 K----GSASTSATGADAIRETVAAALAIAEHTSEDESSGLADAALMAKEVMDFDLYHTWD 133
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + A A CE AF+ +S I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 134 ITPEQAIEKALLCEAAAFDADSRIKNADGTTLNTHQGCRVYGNSNGFIGGYASTRHSLSC 193
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N L + IG AA R SRL A+ + T + PVLF A
Sbjct: 194 VMIAEGEGQMQRDYWYDVNRKGDLLADAQSIGRKAALRAASRLGARPVPTCEVPVLFAAE 253
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L F ISG +LYRKS+FL +LG+++F + I E PH+ + GSS+FD++G+
Sbjct: 254 LAGGLFGSFLGAISGGTLYRKSSFLEGALGQRLFPEWMTIDERPHLKHAMGSSAFDSDGL 313
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V G + Y LSTYS +KLGM +T N+GG H+L + + SD+ ++++M
Sbjct: 314 ATFAKPFVAGGDLVSYVLSTYSGRKLGMPSTANAGGVHNLFV----SHGSDDQAALIRRM 369
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GS
Sbjct: 370 GRGLLVTELMGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGS 429
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GS+LIE M +AG
Sbjct: 430 DLELRSNIRTGSVLIERMTVAG 451
>gi|422650917|ref|ZP_16713717.1| pmbA protein [Pseudomonas syringae pv. actinidiae str. M302091]
gi|330964000|gb|EGH64260.1| pmbA protein [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 448
Score = 344 bits (882), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 177/442 (40%), Positives = 271/442 (61%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+
Sbjct: 14 ELQEQVEHIIAEARRQGASACEVAVSVDQGLSTSVRQREVETVEFNRDQGFGITLYVGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++ +T+ AA IA T+ D +GL D + +DF LY W
Sbjct: 74 K----GSASTSATGADAIRETVAAALAIAEHTSEDESSGLADAALMAKEVMDFDLYHTWD 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + + A CE AF+ +S I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 130 ITPEQSIEKALICEAAAFDADSRIKNADGTTLNTHQGCRVYGNSNGFIGGYASTRHSLSC 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L + IG AA R SRL A+ + T + PVLF A
Sbjct: 190 VMIAEGEGQMQRDYWYDVNRKGELLVDAQSIGRKAALRAASRLGARPVPTCEVPVLFAAE 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L F ISG +LYRKS+FL +LG+++F + I E PH+ + GSS+FD++G+
Sbjct: 250 LAGGLFGSFLGAISGGNLYRKSSFLEGTLGQRLFPEWMTIDERPHLKHAMGSSAFDSDGL 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+NG + Y LSTYS +KLGM +T N+GG H+L + T S++ ++++M
Sbjct: 310 ATYAKPFVENGDLVSYILSTYSGRKLGMPSTANAGGVHNLFV----THGSEDQTALIRRM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GS
Sbjct: 366 GRGLLVTELMGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGS 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GS+LIE M +AG
Sbjct: 426 DLELRSNIRTGSVLIERMTVAG 447
>gi|71735033|ref|YP_276284.1| pmbA protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|257482233|ref|ZP_05636274.1| pmbA protein [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|416018530|ref|ZP_11565458.1| pmbA protein [Pseudomonas syringae pv. glycinea str. B076]
gi|416025210|ref|ZP_11568991.1| pmbA protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|422403895|ref|ZP_16480951.1| pmbA protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|422682184|ref|ZP_16740451.1| pmbA protein [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|71555586|gb|AAZ34797.1| pmbA protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320322502|gb|EFW78595.1| pmbA protein [Pseudomonas syringae pv. glycinea str. B076]
gi|320330029|gb|EFW86016.1| pmbA protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330875145|gb|EGH09294.1| pmbA protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|331011525|gb|EGH91581.1| pmbA protein [Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 448
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 177/442 (40%), Positives = 270/442 (61%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+
Sbjct: 14 ELQEQVEQIIAEARRQGASACEVAVSVDQGLSTSVRQREVETVEFNRDQGFGITLYVGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++ +T+ AA IA T+ D +GL D + +DF LY W
Sbjct: 74 K----GSASTSATGADAIRETVAAALAIAEHTSEDESSGLADAALMAKEVMDFDLYHTWD 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + A A CE AF+ +S I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 130 ITPEQAIEKALICEAAAFDADSRIKNADGTTLNTHQGCRVYGNSNGFVGGYASTRHSLSC 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L + IG AA R SRL A+ + T + PVLF A
Sbjct: 190 VMIAEGEGQMQRDYWYDVNRQGELLADAQSIGRKAALRAASRLGARPVPTCEVPVLFAAE 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L F ISG +LYRKS+FL +LG+++F + I E PH+ + GSS+FD++G+
Sbjct: 250 LAGGLFGSFLGAISGGNLYRKSSFLEGALGQRLFPEWMTIDERPHLKHAMGSSAFDSDGL 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+ G + Y LSTYS +KLGM +T N+GG H+L + T S++ ++++M
Sbjct: 310 ATFAKPFVEGGDLVSYVLSTYSGRKLGMPSTANAGGVHNLFV----THGSEDQAALIRRM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GS
Sbjct: 366 GRGLLVTELMGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGS 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GS+LIE M +AG
Sbjct: 426 DLELRSNIRTGSVLIERMTVAG 447
>gi|289663223|ref|ZP_06484804.1| putative modulator of DNA gyrase; peptidase U62 protein PmbA
[Xanthomonas campestris pv. vasculorum NCPPB 702]
gi|289668282|ref|ZP_06489357.1| putative modulator of DNA gyrase; peptidase U62 protein PmbA
[Xanthomonas campestris pv. musacearum NCPPB 4381]
Length = 455
Score = 343 bits (881), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 266/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++Q +L A+ GA+ + + +E G V VR G ++ +E D+ + V +Y GK
Sbjct: 21 LTDISQRLLERARAAGATQAEVSCSEERGLDVNVRLGDVETVESTRDRGIAVTVYF--GK 78
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G++ST+D SL T+ A IARFT D +GL D + + + PW L
Sbjct: 79 R--KGSASTADLQDSSLESTVAQACAIARFTEDDVASGLADPELMAREFPELDSWHPWAL 136
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A +A CE + ++ I N++ +T S + ANSHGF+ + H IS +
Sbjct: 137 DADTAVDLALACETAGRDADARISNSDGASASTGLSLAVYANSHGFIGRERGTHHSISCA 196
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD WYSS + L+ P+ IG +AA+RT++RL+ + + T + PVLF +
Sbjct: 197 LIAGQGDGMQRDGWYSSALAREDLEAPDAIGRHAAERTLARLQPRSLPTGQLPVLFAPEV 256
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G K+F I E PH+ S++FD EGV
Sbjct: 257 ARSLVGHLLGAVSGGALYRRASFLLDSVGTKLFPDWFNIEELPHLRRGLRSAAFDGEGVA 316
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T++ ++ +G++Q Y L +YSA+KLG++TT N+GG H+L + +N + +L M+ M+
Sbjct: 317 TRRSALINDGVLQRYVLGSYSARKLGLQTTANAGGVHNLQVTAN----AGDLASMIAGMS 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG+G+N +TGDYS+GA G+WIENG I Y V+ +TI+G L++MF I A+GSD
Sbjct: 373 RGLLVTELMGNGVNPVTGDYSRGAGGFWIENGVIAYPVDGLTIAGNLRDMFAGIEAVGSD 432
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ GS+LI M +AG
Sbjct: 433 VDPRSHVKIGSVLINRMTVAG 453
>gi|339485903|ref|YP_004700431.1| C69 family peptidase [Pseudomonas putida S16]
gi|338836746|gb|AEJ11551.1| peptidase U62, modulator of DNA gyrase [Pseudomonas putida S16]
Length = 448
Score = 343 bits (881), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 173/441 (39%), Positives = 267/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEAIIAEARRQGASACEVAVSLEQGLSTTVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IAR T+ D +GL D + D LY W L
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIARHTSEDECSGLADAALMAREIPDLDLYHDWNL 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ A +A CE AF+ + I+N + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 EPEKAIEMALACEAAAFDADPRILNADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A + T + PVLF A L
Sbjct: 191 MIAEGDGQMQRDYWYDVNRQGNLLADPRSIGVRAAQRAASRLGACPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL ++G+++F + + + E PHI + GS++FD +G+
Sbjct: 251 AGGLFGSFLSAISGGNLYRKSSFLEGTIGQRLFPTWLTLDERPHIPRALGSAAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V G + Y L TYS +KLG+ +T N+GG H+L + + ++ ++++M
Sbjct: 311 TYAKPFVDKGELVSYLLGTYSGRKLGLPSTANAGGVHNLFV----SHGVEDQAALIRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MF+QIVAIGSD
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQHAVQEVTIAGNMKDMFQQIVAIGSD 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ TR++ +GS+LIE M +AG
Sbjct: 427 LETRSNIHTGSVLIERMTVAG 447
>gi|298157106|gb|EFH98195.1| PmbA protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
Length = 448
Score = 343 bits (881), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 177/442 (40%), Positives = 270/442 (61%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+
Sbjct: 14 ELQEQVEQIIAEARRQGASACEVAVSVDQGLSTSVRQREVETVEFNRDQGFGITLYVGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++ +T+ AA IA T+ D +GL D + +DF LY W
Sbjct: 74 K----GSASTSATGADAIRETVAAALAIAEHTSEDESSGLADAALMAKEIMDFDLYHTWD 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + A A CE AF+ +S I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 130 ITPEQAIEKALICEAAAFDADSRIKNADGTTLNTHQGCRVYGNSNGFIGGYASTRHSLSC 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L + IG AA R SRL A+ + T + PVLF A
Sbjct: 190 VMIAEGEGQMQRDYWYDVNRQGELLADAQSIGRKAALRAASRLGARPVPTCEVPVLFAAE 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L F ISG +LYRKS+FL +LG+++F + I E PH+ + GSS+FD++G+
Sbjct: 250 LAGGLFGSFLGAISGGNLYRKSSFLEGALGQRLFPEWMTIDERPHLKHAMGSSAFDSDGL 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+ G + Y LSTYS +KLGM +T N+GG H+L + T S++ ++++M
Sbjct: 310 ATFAKPFVEGGDLVSYVLSTYSGRKLGMPSTANAGGVHNLFV----THGSEDQAALIRRM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GS
Sbjct: 366 GRGLLVTELMGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGS 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GS+LIE M +AG
Sbjct: 426 DLELRSNIRTGSVLIERMTVAG 447
>gi|409425543|ref|ZP_11260130.1| peptidase U62 modulator of DNA gyrase [Pseudomonas sp. HYS]
Length = 448
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 173/441 (39%), Positives = 270/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEARRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
++S S+ ++ +T+ AA IA+ T+ D AGL D + DF LY W +
Sbjct: 75 GSASTSASGSE----AIRETVAAALAIAKHTSEDECAGLADPALMAREQPDFDLYHAWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF+ ++ I N + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEKALECEAAAFDADARIKNADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N + L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGELLADPRSIGIRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL ++G+++F S + + E PH+ + GS++FD +G+
Sbjct: 251 AGGLFGSFLSAISGGNLYRKSSFLDGAMGQRLFPSWLTLDERPHLQRALGSAAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y L TYS +KLG+ +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVENGQLVSYVLGTYSGRKLGLPSTANAGGVHNLFV----THGVEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MF+QIVAIG+D
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMKDMFQQIVAIGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ TR++ +GS+LIE M +AG
Sbjct: 427 LETRSNIHTGSVLIERMTVAG 447
>gi|346725589|ref|YP_004852258.1| Zn-dependent protease [Xanthomonas axonopodis pv. citrumelo F1]
gi|346650336|gb|AEO42960.1| Zn-dependent protease [Xanthomonas axonopodis pv. citrumelo F1]
Length = 455
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 264/441 (59%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++Q +L A+ GA+ + + +E G V VR G ++ +E D+ + V +Y GK
Sbjct: 21 LTDISQRLLERARAAGATQAEVSCSEERGLDVNVRLGDVETVESTRDRGIAVTVYF--GK 78
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G++ST+D SL T+ A IARFT D AGL D + + + PW L
Sbjct: 79 R--KGSASTADLQDSSLESTVAQACAIARFTEDDVAAGLADPELMAREFPELDSWHPWAL 136
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A +A CE + ++ I N++ +T S + ANSHGF+ + H IS +
Sbjct: 137 DADTAVDLALACETAGRDADARITNSDGASASTGLSLSVYANSHGFIGRERGTHHSISCA 196
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD WYSS + L+ P+ IG +AA RT++RL+ + + T + PVLF +
Sbjct: 197 LIAGQGDGMQRDGWYSSALAREDLEAPDAIGRHAAARTVARLQPRSLPTGQLPVLFAPEV 256
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G +F I E PH+ S++FD EGV
Sbjct: 257 ARSLVGHLLGAVSGGALYRRASFLLDSVGSTLFPDWFNIEELPHLRRGLRSAAFDGEGVA 316
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T++ ++ +G++Q Y L +YSA+KLG++TT N+GG H+L + +N + +L M+ M+
Sbjct: 317 TRRSALITDGVLQRYVLGSYSARKLGLQTTANAGGVHNLQVTAN----AGDLASMIAGMS 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG+G+N +TGDYS+GA G+WIENG I Y V+ +TI+G L++MF I A+GSD
Sbjct: 373 RGLLVTELMGNGVNPVTGDYSRGAGGFWIENGVIAYPVDGLTIAGNLRDMFAGIEAVGSD 432
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ GS+LI M +AG
Sbjct: 433 VDPRSHVKIGSVLINRMTVAG 453
>gi|415776002|ref|ZP_11487686.1| modulator of DNA gyrase family protein [Escherichia coli 3431]
gi|315617651|gb|EFU98257.1| modulator of DNA gyrase family protein [Escherichia coli 3431]
Length = 450
Score = 343 bits (881), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 268/423 (63%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVSVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 212 AMSDLQTPEWVGAECARRTLSRLAPRKLSTMKAPVIFANEVATGLFVHLVGAIAGGAVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R +VK+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIVKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+NM++ IVA+G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKNMWRDIVAVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|440730900|ref|ZP_20910960.1| modulator of DNA gyrase [Xanthomonas translucens DAR61454]
gi|440376271|gb|ELQ12948.1| modulator of DNA gyrase [Xanthomonas translucens DAR61454]
Length = 454
Score = 343 bits (880), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 167/441 (37%), Positives = 262/441 (59%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+AQ ML A+++GAS + + +E G V VR G ++ +E D+ + + +Y K
Sbjct: 20 LSDIAQRMLARARELGASQAEVSCSEDRGLDVNVRLGAVETVEATRDRGIGITVYFGQRK 79
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST+D + SL T+ A IAR+T D AGL D + + + + PW L
Sbjct: 80 ----GSASTADLHESSLEATVAQACAIARYTEDDVAAGLADAALMARDIPELDRWHPWAL 135
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
++A +A CE + + N++ + +S + ANSHGF+ + H I S
Sbjct: 136 EAEEAIELALSCEAAGREADPRVANSDGASAGSSESLSVYANSHGFVGRERSTHHSIGCS 195
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD+WYSS + L+ P IG AA+RT++RL+ + + T + PVLF +
Sbjct: 196 LIAGQGDAMQRDHWYSSALAREDLEAPAAIGRRAAERTVARLQPRSLPTGELPVLFAPEM 255
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G ++F I E PH+ S++FD EGV
Sbjct: 256 ARSLVGHLLGAVSGGALYRRASFLLDSVGTRLFPDWFAIDERPHLRRGLRSAAFDGEGVA 315
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T+ ++ G++Q Y L +YSA+KLG++TT N+GG H+L + +N +D+L + +
Sbjct: 316 TRAAPLITGGVLQRYVLGSYSARKLGLQTTANAGGVHNLQVAAN----ADDLSSIAAGIP 371
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+WIENG I Y V+E+TI+G L+ MF++I A+G D
Sbjct: 372 RGLLVTELMGSGVNPVTGDYSRGAGGFWIENGAIAYPVDEVTIAGNLREMFQRIEAVGRD 431
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R+ G++L+ M +AG
Sbjct: 432 IDVRSHVHIGAVLVGKMTVAG 452
>gi|58582926|ref|YP_201942.1| hypothetical protein XOO3303 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|58427520|gb|AAW76557.1| PmbA protein [Xanthomonas oryzae pv. oryzae KACC 10331]
Length = 470
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/441 (39%), Positives = 266/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++Q +L A+ GA+ + + +E G V VR G ++ +E D+ + V +Y GK
Sbjct: 36 LTDISQRLLERARAAGATQAEVSCSEERGLDVNVRLGDVETVESTRDRGIAVTVYF--GK 93
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G++ST+D SL T+ A IARFT D +GL D + + + PW L
Sbjct: 94 R--KGSASTADLQDSSLESTVAQACAIARFTEDDAASGLADAELMAREFPELDSWHPWAL 151
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A +A CE + ++ I N++ +T S + ANSHGF+ + H IS +
Sbjct: 152 DADTAVDLALACETAGRDADARISNSDGASASTGLSLSVYANSHGFIGRERGTHHSISCA 211
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD WYSS + L+ P+ IG +AA+RT++RL+ + + T + PVLF +
Sbjct: 212 LIAGQGDGMQRDGWYSSALAREDLEAPDAIGRHAAERTLARLQPRSLPTGQLPVLFAPDV 271
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G K+F I E PH+ S++FD EGV
Sbjct: 272 ARSLVGHLLGAVSGGALYRRASFLLDSVGTKLFPDWFNIEELPHLRRGLRSAAFDGEGVA 331
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T++ ++ +G++Q Y L +YSA+KLG++TT N+GG H+L + +N + +L M+ M+
Sbjct: 332 TRRSALITDGVLQRYVLGSYSARKLGLQTTANAGGVHNLQVTAN----AGDLASMIAGMS 387
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG+G+N +TGDYS+GA G+WIENG I Y V+ +TI+G L++MF I A+GSD
Sbjct: 388 RGLLVTELMGNGVNPVTGDYSRGAGGFWIENGVIAYPVDGLTIAGNLRDMFAGIEAVGSD 447
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ GS+L+ M +AG
Sbjct: 448 VDPRSHVKIGSVLVGKMTVAG 468
>gi|389759290|ref|ZP_10191747.1| putative Zn-dependent protease-like protein [Rhodanobacter sp. 115]
gi|388430560|gb|EIL87718.1| putative Zn-dependent protease-like protein [Rhodanobacter sp. 115]
Length = 455
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 177/443 (39%), Positives = 268/443 (60%), Gaps = 12/443 (2%)
Query: 21 LAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMF 80
LA+D++ A+ GAS + + + G SV VR G+++ +E D+ + +Y K
Sbjct: 21 LAEDVIRRARAAGASQAEVSASIDTGLSVNVRLGEVETVEHTRDRGFGLTVYFGQRK--- 77
Query: 81 YGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSID 140
G++ST+D S+ T++ A IARFT D AGL D + + L+ PW +
Sbjct: 78 -GSASTADLNPDSIQATLDQACAIARFTEEDPAAGLADAARMATAFPELDLWHPWAIDTA 136
Query: 141 DAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIA 200
DA + R E A ++ I N++ V +S + ANSHGF+ ++H +S+S IA
Sbjct: 137 DAIALGQRIEG-AGRAHAGITNSDGANVQMGESVSVYANSHGFVGCERGTRHGLSLSLIA 195
Query: 201 IKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFE 260
+G+ MQRD WY S + +G AA+RT+SR+ A+ +STR+CPVLF LA
Sbjct: 196 GEGEHMQRDYWYDSVRAADDFMDAQALGDKAAERTLSRMGARSLSTRECPVLFAPELARG 255
Query: 261 LLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQK 320
L+ +SG +LYR+++FL+D GK I + I+E PH+L S +FD EGV T+
Sbjct: 256 LIGHLVGAVSGGALYRRASFLLDHAGKAIMPGWLNIVEQPHLLRGKASGNFDAEGVATRD 315
Query: 321 RLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD----NLKEMLKKM 376
+V+ G++ Y L +YSA+KLG+ +TGN+GG H+LI+ K +SD + ML+++
Sbjct: 316 SALVEGGVLARYVLGSYSARKLGLSSTGNAGGIHNLIV---KPGASDGEAGDFGAMLQRL 372
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
TGLL+TE+MG G+N ITGDYS+GA G+W+ENG I Y VEEITI+ L++MF I A+G+
Sbjct: 373 GTGLLLTEVMGQGVNGITGDYSRGAAGFWVENGLITYPVEEITIAANLRDMFAGIRAVGT 432
Query: 437 DVLTRNSNTSGSILIENMIIAGK 459
DV R+ +GSIL++ M +AG+
Sbjct: 433 DVDPRSHILTGSILVDRMTVAGE 455
>gi|167031964|ref|YP_001667195.1| peptidase U62 modulator of DNA gyrase [Pseudomonas putida GB-1]
gi|166858452|gb|ABY96859.1| peptidase U62 modulator of DNA gyrase [Pseudomonas putida GB-1]
Length = 448
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/441 (39%), Positives = 267/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEAIIAEARRQGASACEVAVSLEQGLSTTVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS ++ +T+ AA IA+ T+ D +GL D + D LY W +
Sbjct: 75 ----GSASTSASGPDAIRETVAAALAIAKHTSEDECSGLADAALMAREIPDLDLYHDWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ A +A CE AF+ + I+N + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 EPEKAIEMALACEAAAFDADPRILNADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEGEGQMQRDYWYDVNRRGNLLADPRSIGVRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL ++G+++F S + + E PHI + GS++FD +G+
Sbjct: 251 AGGLFGSFLSAISGGNLYRKSSFLEGTIGQRLFPSWLTLDERPHIPRALGSAAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V G + Y L TYS +KLG+ +T NSGG H+L + T ++ ++++M
Sbjct: 311 TYAKPFVDKGELVSYLLGTYSGRKLGLPSTANSGGVHNLFV----THGVEDQAALIRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MF+QIVAIG+D
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQHAVQEVTIAGNMKDMFQQIVAIGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ TR++ +GS+LIE M +AG
Sbjct: 427 LETRSNIHTGSVLIERMTVAG 447
>gi|84624782|ref|YP_452154.1| PmbA protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|84368722|dbj|BAE69880.1| PmbA protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 470
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/441 (39%), Positives = 266/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++Q +L A+ GA+ + + +E G V VR G ++ +E D+ + V +Y GK
Sbjct: 36 LTDISQRLLERARAAGATQAEVSCSEERGLDVNVRLGDVETVESTRDRGIAVTVYF--GK 93
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G++ST+D SL T+ A IARFT D +GL D + + + PW L
Sbjct: 94 R--KGSASTADLQDSSLESTVAQACAIARFTEDDAASGLADPELMAREFPELDSWHPWAL 151
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A +A CE + ++ I N++ +T S + ANSHGF+ + H IS +
Sbjct: 152 DADTAVDLALACETAGRDADARISNSDGASASTGLSLSVYANSHGFIGRERGTHHSISCA 211
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD WYSS + L+ P+ IG +AA+RT++RL+ + + T + PVLF +
Sbjct: 212 LIAGQGDGMQRDGWYSSALAREDLEAPDAIGRHAAERTLARLQPRSLPTGQLPVLFAPDV 271
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G K+F I E PH+ S++FD EGV
Sbjct: 272 ARSLVGHLLGAVSGGALYRRASFLLDSVGTKLFPDWFNIEELPHLRRGLRSAAFDGEGVA 331
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T++ ++ +G++Q Y L +YSA+KLG++TT N+GG H+L + +N + +L M+ M+
Sbjct: 332 TRRSALITDGVLQRYVLGSYSARKLGLQTTANAGGVHNLQVTAN----AGDLASMIAGMS 387
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG+G+N +TGDYS+GA G+WIENG I Y V+ +TI+G L++MF I A+GSD
Sbjct: 388 RGLLVTELMGNGVNPVTGDYSRGAGGFWIENGVITYPVDGLTIAGNLRDMFAGIEAVGSD 447
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ GS+L+ M +AG
Sbjct: 448 VDPRSHVKIGSVLVGKMTVAG 468
>gi|333901867|ref|YP_004475740.1| peptidase U62 modulator of DNA gyrase [Pseudomonas fulva 12-X]
gi|333117132|gb|AEF23646.1| peptidase U62 modulator of DNA gyrase [Pseudomonas fulva 12-X]
Length = 448
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 179/441 (40%), Positives = 271/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q + +L AKK GA+ + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQAQVEQILAEAKKQGATACEVAVSVEQGLSTTVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS + ++ +T+ AA IA+ + D AGL D + + D LY W +
Sbjct: 75 ----GSASTSATGEAAIRETVAAALAIAKHASEDESAGLADAALMARDLPDLDLYHAWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF+ ++ I N + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAVERALTCEAAAFDTDARIRNADGTSLGTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY NS L IG AA+R +SRL A+ +ST + PVLF A L
Sbjct: 191 MIAESEGQMQRDYWYDVNSQGNLLADAASIGRRAAQRAVSRLGARPVSTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL +LG+++F S + + E PHI + GS+SFD +G+
Sbjct: 251 ATGLFGSFLGAISGGALYRKSSFLEGTLGEQLFPSWLNLDERPHIPRAMGSASFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y LSTYS +KLGM +T N+GG H+L + + ++ + ++K+M
Sbjct: 311 TYAKPFVEGGRLVSYILSTYSGRKLGMPSTANAGGVHNLFV----SHGEEDQQALIKRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ++V+E+TI+G +++MF+QIVA+GSD
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAGGYWVENGEIQFAVQEVTIAGNMRDMFRQIVAVGSD 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIEKMTVAG 447
>gi|407793186|ref|ZP_11140221.1| hypothetical protein A10D4_03535 [Idiomarina xiamenensis 10-D-4]
gi|407215546|gb|EKE85385.1| hypothetical protein A10D4_03535 [Idiomarina xiamenensis 10-D-4]
Length = 448
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 175/435 (40%), Positives = 264/435 (60%), Gaps = 8/435 (1%)
Query: 24 DMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGN 83
D L A K GAS + + +G SV R G+++ +E N D + + +Y + G+
Sbjct: 21 DALAQADKAGASAAECAISRSSGISVGTRLGEVETVEFNQDGALGITVY----RDQCKGS 76
Query: 84 SSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAK 143
+ST+D +++ ++ A IAR+T+SD AGL + + D LY S D A
Sbjct: 77 ASTTDLAPQAIKAAVSKACEIARYTSSDPAAGLAPAEMMAYDYPDLNLYFDADQSADYAL 136
Query: 144 LIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKG 203
A CE A ++ IVN++ ++ + NSHGF+ GY S+ +S IA +
Sbjct: 137 QQALACERHALGLDARIVNSDGASYSSHAGFRVYGNSHGFIGGYLQSRQSLSCVLIAKQE 196
Query: 204 KEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLN 263
++MQRD YS D ++L P ++ AAK T++RL A+KI T K PV+F A +A L
Sbjct: 197 EQMQRDFSYSVARDQQQLLSPAVVAEQAAKETLARLNARKIDTAKVPVIFRADVANSLFG 256
Query: 264 IFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLV 323
ISG +LYRKS+FL+DS+G++I + I E PH+ G+ SS FDNEGV+T+ + +
Sbjct: 257 HLVGAISGGNLYRKSSFLLDSIGQQILPDWLTIEEQPHLSGALASSPFDNEGVRTKTQTI 316
Query: 324 VKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVT 383
+ G +Q Y +++Y+A+KL + TG++GG H+ + + +L + K+M GLLVT
Sbjct: 317 IDKGQLQTYLITSYAARKLDLPVTGHAGGIHNWRV----SHGEQDLAALCKQMGRGLLVT 372
Query: 384 ELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNS 443
ELMG G+N + GDYS+GA G+W+E+G+IQY+VEEITI+G L +MFKQIVA+G+DV R+
Sbjct: 373 ELMGQGVNLVNGDYSRGAAGFWVEHGEIQYAVEEITIAGNLADMFKQIVAVGNDVDHRHG 432
Query: 444 NTSGSILIENMIIAG 458
+GS+LIE M IAG
Sbjct: 433 VLTGSVLIEQMRIAG 447
>gi|194366668|ref|YP_002029278.1| peptidase U62 modulator of DNA gyrase [Stenotrophomonas maltophilia
R551-3]
gi|194349472|gb|ACF52595.1| peptidase U62 modulator of DNA gyrase [Stenotrophomonas maltophilia
R551-3]
Length = 455
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 171/438 (39%), Positives = 270/438 (61%), Gaps = 8/438 (1%)
Query: 21 LAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMF 80
L+Q +L+ A+ +GAS + + +E G V VR G ++ ++ D+ + V +Y K
Sbjct: 24 LSQQLLDRARALGASQAEVSCSEDRGLEVNVRLGDVETVQSTRDRGIAVTVYFGQRK--- 80
Query: 81 YGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSID 140
G++ST D + SL T+ A IAR T D AGL + + + D + PW L D
Sbjct: 81 -GSASTGDLNEASLAATVEQACAIARHTEDDPAAGLAEAVLMATDFPDLDAWHPWALQAD 139
Query: 141 DAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIA 200
+A +A CE ++ I N++ V++ QS + ANSHGF+ + H I + IA
Sbjct: 140 EAVDLALACETAGREADAQIRNSDGASVSSMQSLSVYANSHGFIGRERGTHHSIGCALIA 199
Query: 201 IKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFE 260
+G MQRD WY+ + L+ ++G AA+RT++RL+ + +ST PVLF +A
Sbjct: 200 GQGDGMQRDGWYTGALAREDLEDVGLVGRRAAERTVARLQPRSLSTGSMPVLFAPEVARS 259
Query: 261 LLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQK 320
L+ +SG +LYR+++FL+DS+G+++F +QI E PH+ S++FD +GV T+
Sbjct: 260 LVGHLLSAVSGGALYRQASFLLDSVGQQLFPDWMQIEELPHLRRGLRSAAFDGDGVATRA 319
Query: 321 RLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGL 380
+V++G++Q Y L +YSA+KLG++TT N+GG H+L + +N + +L+E+ ++M GL
Sbjct: 320 SALVRDGVLQRYVLGSYSARKLGLQTTANAGGVHNLQLAAN----AGSLQEIARQMGDGL 375
Query: 381 LVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLT 440
LVTELMG G+N +TGDYS+GA G+ +ENG+IQ+ V+ ITI+G L+ MF+ I A+GSDV
Sbjct: 376 LVTELMGQGVNGVTGDYSRGAGGFRVENGEIQFPVDGITIAGNLREMFRSIEAVGSDVDP 435
Query: 441 RNSNTSGSILIENMIIAG 458
R+ +GSIL+ M IAG
Sbjct: 436 RSHIRTGSILLGRMTIAG 453
>gi|188577767|ref|YP_001914696.1| PmbA protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188522219|gb|ACD60164.1| PmbA [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 455
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/441 (39%), Positives = 266/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++Q +L A+ GA+ + + +E G V VR G ++ +E D+ + V +Y GK
Sbjct: 21 LTDISQRLLERARAAGATQAEVSCSEERGLDVNVRLGDVETVESTRDRGIAVTVYF--GK 78
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G++ST+D SL T+ A IARFT D +GL D + + + PW L
Sbjct: 79 R--KGSASTADLQDSSLESTVAQACAIARFTEDDAASGLADAELMAREFPELDSWHPWAL 136
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A +A CE + ++ I N++ +T S + ANSHGF+ + H IS +
Sbjct: 137 DADTAVDLALACETAGRDADARISNSDGASASTGLSLSVYANSHGFIGRERGTHHSISCA 196
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD WYSS + L+ P+ IG +AA+RT++RL+ + + T + PVLF +
Sbjct: 197 LIAGQGDGMQRDGWYSSALAREDLEAPDAIGRHAAERTLARLQPRSLPTGQLPVLFAPDV 256
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G K+F I E PH+ S++FD EGV
Sbjct: 257 ARSLVGHLLGAVSGGALYRRASFLLDSVGTKLFPDWFNIEELPHLRRGLRSAAFDGEGVA 316
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T++ ++ +G++Q Y L +YSA+KLG++TT N+GG H+L + +N + +L M+ M+
Sbjct: 317 TRRSALITDGVLQRYVLGSYSARKLGLQTTANAGGVHNLQVTAN----AGDLASMIAGMS 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG+G+N +TGDYS+GA G+WIENG I Y V+ +TI+G L++MF I A+GSD
Sbjct: 373 RGLLVTELMGNGVNPVTGDYSRGAGGFWIENGVIAYPVDGLTIAGNLRDMFAGIEAVGSD 432
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ GS+L+ M +AG
Sbjct: 433 VDPRSHVKIGSVLVGKMTVAG 453
>gi|384418659|ref|YP_005628019.1| PmbA protein [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353461572|gb|AEQ95851.1| PmbA [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 455
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/441 (39%), Positives = 266/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++Q +L A+ GA+ + + +E G V VR G ++ +E D+ + V +Y GK
Sbjct: 21 LTDISQRLLERARAAGATQAEVSCSEERGLDVNVRLGDVETVESTRDRGIAVTVYF--GK 78
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G++ST+D SL T+ A IARFT D +GL D + + + PW L
Sbjct: 79 R--KGSASTADLQDSSLESTVAQACAIARFTEDDAASGLADPELMAREFPELDSWHPWAL 136
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A +A CE + ++ I N++ +T S + ANSHGF+ + H IS +
Sbjct: 137 DADTAVDLALACETAGRDADARISNSDGASASTGLSLSVYANSHGFIGRERGTHHSISCA 196
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD WYSS + L+ P+ IG +AA+RT++RL+ + + T + PVLF +
Sbjct: 197 LIAGQGDGMQRDGWYSSALAREDLEAPDAIGRHAAERTLARLQPRSLPTGQLPVLFAPDV 256
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G K+F I E PH+ S++FD EGV
Sbjct: 257 ARSLVGHLLGAVSGGALYRRASFLLDSVGTKLFPDWFNIEELPHLRRGLRSAAFDGEGVA 316
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T++ ++ +G++Q Y L +YSA+KLG++TT N+GG H+L + +N + +L M+ M+
Sbjct: 317 TRRSALITDGVLQRYVLGSYSARKLGLQTTANAGGVHNLQVTAN----AGDLASMIAGMS 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG+G+N +TGDYS+GA G+WIENG I Y V+ +TI+G L++MF I A+GSD
Sbjct: 373 RGLLVTELMGNGVNPVTGDYSRGAGGFWIENGVIAYPVDGLTIAGNLRDMFAGIEAVGSD 432
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ GS+L+ M +AG
Sbjct: 433 VDPRSHVKIGSVLVGKMTVAG 453
>gi|433679000|ref|ZP_20510789.1| Protein pmbA [Xanthomonas translucens pv. translucens DSM 18974]
gi|430815879|emb|CCP41330.1| Protein pmbA [Xanthomonas translucens pv. translucens DSM 18974]
Length = 454
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 167/441 (37%), Positives = 261/441 (59%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+AQ ML A+++GAS + + E G V VR G ++ +E D+ + V +Y K
Sbjct: 20 LSDIAQRMLARARELGASQAEVSCTEDRGLDVNVRLGAVETVEATRDRGIGVTVYFGQRK 79
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST+D + SL T+ A IAR+T D +GL D + + + + PW L
Sbjct: 80 ----GSASTADLHESSLEATVAQACAIARYTEDDVASGLADAALMARDMPELDRWHPWAL 135
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
++A +A CE + + N++ + +S + ANSHGF+ + H I S
Sbjct: 136 EAEEAIELALSCEAAGREADPRVANSDGASAGSSESLSVYANSHGFVGRERSTHHSIGCS 195
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD+WYSS + L+ P IG AA+RT++RL+ + + T + PVLF +
Sbjct: 196 LIAGQGDAMQRDHWYSSALAREDLEAPAAIGRRAAERTVARLQPRSLPTGELPVLFAPEM 255
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G ++F I E PH+ S++FD EGV
Sbjct: 256 ARSLVGHLLGAVSGGALYRRASFLLDSVGTRLFPDWFAIDERPHLRRGLRSAAFDGEGVA 315
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T+ ++ G++Q Y L +YSA+KLG++TT N+GG H+L + +N +D+L + +
Sbjct: 316 TRAAPLIAGGVLQRYVLGSYSARKLGLQTTANAGGVHNLQVAAN----ADDLASIAAGIP 371
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+WIENG I Y V+E+TI+G L+ MF++I A+G D
Sbjct: 372 RGLLVTELMGSGVNPVTGDYSRGAGGFWIENGAIAYPVDEVTIAGNLREMFQRIEAVGRD 431
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R+ G++L+ M +AG
Sbjct: 432 IDVRSHVHIGAVLVGKMTVAG 452
>gi|289627561|ref|ZP_06460515.1| pmbA protein [Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|289646987|ref|ZP_06478330.1| pmbA protein [Pseudomonas syringae pv. aesculi str. 2250]
gi|422585153|ref|ZP_16660242.1| pmbA protein [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330869972|gb|EGH04681.1| pmbA protein [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 448
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/442 (40%), Positives = 270/442 (61%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+
Sbjct: 14 ELQEQVEQIIAEARRQGASACEVAVSVDQGLSTSVRQREVETVEFNRDQGFGITLYVGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++ +T+ AA IA T+ D +GL D + +DF LY W
Sbjct: 74 K----GSASTSATGADAIRETVAAALAIAEHTSEDESSGLADAALMAKEIMDFDLYHTWD 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + A A CE AF+ +S I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 130 ITPEQAIEKALICEAAAFDADSRIKNADGTTLNTHQGCRVYGNSNGFIGGYASTRHSLSC 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L + IG AA R SRL A+ + T + PVLF A
Sbjct: 190 VMIAEGEGQMQRDYWYDVNRQGELLADAQSIGRKAALRAGSRLGARPVPTCEVPVLFAAE 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L F ISG +LYRKS+FL +LG+++F + I E PH+ + GSS+FD++G+
Sbjct: 250 LAGGLFGSFLGAISGGNLYRKSSFLEGALGQRLFPEWMTIDERPHLKHAMGSSAFDSDGL 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+ G + Y LSTYS +KLGM +T N+GG H+L + T S++ ++++M
Sbjct: 310 ATFAKPFVEGGDLVSYVLSTYSGRKLGMPSTANAGGVHNLFV----THGSEDQAALIRRM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GS
Sbjct: 366 GRGLLVTELMGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGS 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GS+LIE M +AG
Sbjct: 426 DLELRSNIRTGSVLIERMTVAG 447
>gi|429332218|ref|ZP_19212948.1| pmbA protein [Pseudomonas putida CSV86]
gi|428763049|gb|EKX85234.1| pmbA protein [Pseudomonas putida CSV86]
Length = 448
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 272/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
++S SD ++ +T+ AA IA+ T+ D+ AGL D + + DF LY W +
Sbjct: 75 GSASTSASGSD----AIRETVAAALAIAKHTSEDDCAGLADPALMARDLPDFDLYHAWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF+ + I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 131 TPEQAIEKALVCEAAAFDADPRIKNADGTTLNTHQGCRVYGNSNGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N + L P+ IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEGDGQMQRDYWYDVNRQGELLADPKAIGIRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL ++G+++F S + + E PH+ + GS++FD +G+
Sbjct: 251 AGGLFGSFLSAISGGNLYRKSSFLEGTIGQRLFPSWLTLDERPHLPRALGSAAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y L TYS +KLG+ +T N+GG H+L + + ++ ++++M
Sbjct: 311 TYAKPFVENGQLVSYVLGTYSGRKLGLPSTANAGGVHNLFV----SHGVEDQAALIRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ++V+E+TI+G +++MF+QIVAIGSD
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGYWVENGEIQFAVQEVTIAGNMKDMFQQIVAIGSD 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ TR++ +GSILIE M +AG
Sbjct: 427 LETRSNIHTGSILIERMTVAG 447
>gi|170766917|ref|ZP_02901370.1| protein PmbA [Escherichia albertii TW07627]
gi|170124355|gb|EDS93286.1| protein PmbA [Escherichia albertii TW07627]
Length = 446
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 267/423 (63%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVSVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 208 AMSDLQTPEWVGAECARRTLSRLAPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R +VK+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIVKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGF----CFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+NM++ IVA+G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKNMWRDIVAVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|325920748|ref|ZP_08182654.1| microcin-processing peptidase 1 [Xanthomonas gardneri ATCC 19865]
gi|325548800|gb|EGD19748.1| microcin-processing peptidase 1 [Xanthomonas gardneri ATCC 19865]
Length = 455
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/441 (39%), Positives = 265/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+AQ +L A+ GA+ + + +E G V VR G ++ +E D+ + V +Y GK
Sbjct: 21 LTDIAQRLLERARAAGATQAEVSCSEERGLDVNVRLGDVETVESTRDRGIAVTVYF--GK 78
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G++ST+D SL T+ A IAR+T D AGL D + + + PW L
Sbjct: 79 R--KGSASTADLQDSSLESTVAQACAIARYTEDDVAAGLADPELMAREFPELDSWHPWAL 136
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A +A CE + ++ I N++ +T S + ANSHGF+ + H IS +
Sbjct: 137 DADTAVDLALACETAGRDADTRISNSDGASASTGLSLSVYANSHGFIGRERGTHHSISCA 196
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD WYSS + L+ PE IG +AA+RT++RL+ + + T + PVLF +
Sbjct: 197 LIAGQGDGMQRDGWYSSALAREDLEAPEAIGRHAAERTLARLQPRSLPTGQLPVLFAPEV 256
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G K+F I E PH+ S++FD EGV
Sbjct: 257 ARSLVGHLLGAVSGGALYRRASFLLDSVGTKLFPDWFNIEELPHLRRGLRSAAFDGEGVA 316
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T++ ++ +G++Q Y L +YSA+KLG++TT N+GG H+L + +N + +L M+ M+
Sbjct: 317 TRRSALITDGVLQRYVLGSYSARKLGLQTTANAGGVHNLQVTAN----AGDLASMMSGMS 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG+G+N +TGDYS+GA G+WIENG I Y V+ +TI+G L+ MF I A+G+D
Sbjct: 373 RGLLVTELMGNGVNPVTGDYSRGAGGFWIENGVIAYPVDGLTIAGNLREMFAGIEAVGND 432
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ G++L+ M +AG
Sbjct: 433 VDPRSHVKIGAVLLNRMTVAG 453
>gi|375110371|ref|ZP_09756595.1| hypothetical protein AJE_10418 [Alishewanella jeotgali KCTC 22429]
gi|374569544|gb|EHR40703.1| hypothetical protein AJE_10418 [Alishewanella jeotgali KCTC 22429]
Length = 446
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/443 (39%), Positives = 273/443 (61%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+E ++ +L +AKK+GAS + + G SV R G+++ +E N D + + +Y
Sbjct: 11 AEVKEAVSQVLAHAKKLGASSAEASMSRTRGLSVETRHGEVETVEFNQDGGLGISLYFGQ 70
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
K G++ST+D ++L T+ AA +IAR+T+ D AG+ + + LE NP + LY P
Sbjct: 71 RK----GSASTADLSPQALKRTVEAAADIARYTSEDPHAGVAEASWLEFNPPELDLYYPD 126
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
+S + A ++ E AF +S I N+E +T Q + NSHG + GYP S+H S
Sbjct: 127 SISTEQAIVLCAAAEEAAFAEDSRITNSEGASFSTHQGLKVYGNSHGQLVGYPSSRHSFS 186
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I G +MQRD Y+ L P +G AA+ T++RL+ +K+ T+K PVLF A
Sbjct: 187 CVVIGEAGDDMQRDYSYTVARRYADLLDPRQVGREAARETVARLQPRKVPTQKVPVLFRA 246
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L ISG S+YRKS+FL+D +G++I + + I+E PH+ + SS FD+EG
Sbjct: 247 DIASSLFGHLVSAISGGSIYRKSSFLLDKVGQQIMAPGLTILEKPHLNQALASSPFDSEG 306
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
VKT+ V++ G++ Y ++YSA+KLGM +TG++GG H+ ++ +++L + ++
Sbjct: 307 VKTRDLAVIEQGVLTTYLTTSYSARKLGMASTGHAGGIHNWLV----QHGNEDLLALCRQ 362
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M GLLVTELMG G+N +TGDYS+GA G+W+E+G+IQ+ V E+TI+G L+++F IVA+G
Sbjct: 363 MGKGLLVTELMGQGVNTVTGDYSRGASGFWVEHGEIQFPVAEVTIAGNLKDIFMNIVAVG 422
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
+DV R +GS+L+ M +AG
Sbjct: 423 NDVDRRGGVHTGSVLVSQMQLAG 445
>gi|393763768|ref|ZP_10352381.1| hypothetical protein AGRI_12281 [Alishewanella agri BL06]
gi|392605082|gb|EIW87980.1| hypothetical protein AGRI_12281 [Alishewanella agri BL06]
Length = 446
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/443 (39%), Positives = 271/443 (61%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+E +Q +L +AK++GAS + + G SV R G+++ +E N D + + +Y
Sbjct: 11 AEVKQAVSQVLAHAKQLGASSAEASMSRTRGLSVETRHGEVETVEFNQDGGLGISLYFGQ 70
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
K G++ST+D ++L T+ AA +IAR+T+ D AG+ + + LE NP LY P
Sbjct: 71 RK----GSASTADLSPQALKRTVEAAADIARYTSEDPHAGVAEASWLEFNPPQLDLYYPD 126
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
+ + A + E AF +S I N+E +T Q + NSHG + GYP S+H S
Sbjct: 127 SIGTEKAIALCAAAEEAAFAEDSRITNSEGASFSTHQGLKVYGNSHGQLVGYPSSRHSFS 186
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I G +MQRD Y+ L P IG AA+ T+SRL+ +KI T+K PVLF A
Sbjct: 187 CVVIGEAGDDMQRDYSYTVARRYADLLDPRQIGREAARETVSRLQPRKIPTQKVPVLFRA 246
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L ISG S+YRKS+FL+D++G++I + + I+E PH+ + SS FD+EG
Sbjct: 247 DIASSLFGHLVSAISGGSIYRKSSFLLDTVGQQIMAPGLTILEKPHLDLALASSPFDSEG 306
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
VKT+ V++ G++ Y ++YSA+KLGM +TG++GG H+ ++ +D+L + ++
Sbjct: 307 VKTRDLTVIEQGVLTTYLTTSYSARKLGMASTGHAGGIHNWLV----QHGNDDLAALCRQ 362
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M GLLVTELMG G+N +TGDYS+GA G+W+E+G+IQ+ V E+TI+G L+++F IVAIG
Sbjct: 363 MGKGLLVTELMGQGVNTVTGDYSRGASGFWVEHGEIQFPVAEVTIAGNLKDIFMNIVAIG 422
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
+DV R +GS+L+ M +AG
Sbjct: 423 NDVDRRGGVQTGSVLVSQMQVAG 445
>gi|408483785|ref|ZP_11190004.1| putative modulation of DNA gyrase-like protein [Pseudomonas sp.
R81]
Length = 448
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 270/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + +L AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQILAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYMGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS ++ +T+ AA IA+ T+ D +GL D+ + + DF L+ W +
Sbjct: 75 ----GSASTSASGPDAIRETVAAALAIAKHTSEDESSGLADKALMAKDLQDFDLFHAWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF+ + I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEKALICEAAAFDADPRIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N + L IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGELLADAVSIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL S+G+K+F + I E PH++ + GS+SFD +G+
Sbjct: 251 AGGLFGSFLGAISGGNLYRKSSFLEGSIGQKLFPEWLTIDERPHLMRAMGSTSFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TY+ +KLG+ +T NSGG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVEKGELVSYVLGTYAGRKLGLPSTANSGGVHNLFV----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|384259906|ref|YP_005403840.1| peptidase PmbA [Rahnella aquatilis HX2]
gi|380755882|gb|AFE60273.1| peptidase PmbA [Rahnella aquatilis HX2]
Length = 446
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/445 (39%), Positives = 270/445 (60%), Gaps = 9/445 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ +Q L AK G+ + + ++ G V R G+++ +E N+D + + +Y Q
Sbjct: 11 RKTLEQAVSQALELAKA-GSDAAEVAVSKTTGIGVSTRFGEVENVEFNSDGALGITVYYQ 69
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
+ K G++S++D ++ T+ AA +IAR+T+ D FAG+ D+ L + D L+ P
Sbjct: 70 NRK----GSASSTDLSPDAISRTVQAALDIARYTSPDPFAGVADKEMLAFDAPDLDLFHP 125
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
L D + +A R E A + I N E + + NSHG + Y ++H I
Sbjct: 126 EELDPDRSIELAARAEQAALQADKRITNTEGGSFNSHYGIRVFGNSHGMLQSYCSTRHSI 185
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S IA +M+RD YS L PE +G A+RT+SRL +K+ T + PVLF
Sbjct: 186 SASVIAEHEGDMERDYAYSIARKMSDLKDPEWVGAECARRTLSRLAPRKLPTMQAPVLFA 245
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+ +A L ISG S+YRKS+FL+DSLGK+I + I E PH+L S+ FD+E
Sbjct: 246 SEVATGLFGHLVGAISGGSIYRKSSFLLDSLGKQILPEWLTIEEHPHLLQGLASTPFDSE 305
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+T++R +VK+G++Q + ++ YSA+KLG++TTG++GG H+ I D+ ML+
Sbjct: 306 GVRTERRDIVKDGVLQNWLMTCYSARKLGLQTTGHAGGIHNWRIAGQ----GDDFAGMLR 361
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
K++ GL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L++M++ +VAI
Sbjct: 362 KLDKGLVVTELMGQGVSGVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNMVAI 421
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
GSD+ TR++ GS+L+ M IAG+
Sbjct: 422 GSDIETRSNIQCGSVLLPAMKIAGE 446
>gi|374705523|ref|ZP_09712393.1| microcin-processing peptidase 1 [Pseudomonas sp. S9]
Length = 448
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 178/442 (40%), Positives = 271/442 (61%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
+ Q + ++ A+K GAS + + G S VR+ +++ +E N D+ + +Y+
Sbjct: 14 QLQAQVEQIIAEARKQGASACEVAVSVEQGLSTTVRQREVETVEFNRDQGFGITLYLGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++ +T+ AA IA+ + D AGL D + + D LY W
Sbjct: 74 K----GSASTSATGDAAIRETVAAALAIAKHASEDECAGLADAALMARDLPDLDLYHGWS 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + + A RCE AF+ + I N + T ++T Q + NS+GF+ GY ++H +S
Sbjct: 130 ITPEQSIEHALRCEGAAFDADKRIKNADGTSLSTHQGCRVYGNSNGFIGGYASTRHSLSC 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA MQRD WY N + L PE IG AA R +SRL A+ + T + PVLF A
Sbjct: 190 VMIAEDKGLMQRDYWYDVNRQGELLASPEAIGARAAMRAVSRLGARPVPTCEVPVLFAAE 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L + F ISG S+YRKS+FL ++G+++F + + E PHI + GS+SFD +G+
Sbjct: 250 LATGLFSSFLGAISGGSIYRKSSFLEGAIGQQLFPQWLSLDERPHIPRAMGSASFDGDGL 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+NG + Y LSTYS +KLGM +T N+GG H+L + T ++ + ++K+M
Sbjct: 310 ATYAKSFVENGELLSYVLSTYSGRKLGMPSTANAGGVHNLFV----THGDEDQQALIKRM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ+ V+E+TI+G +++MFKQIVA+G+
Sbjct: 366 GRGLLVTELMGHGLNMVTGDYSRGAGGYWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGN 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R+S +GS+LIE M +AG
Sbjct: 426 DLELRSSIRTGSVLIERMTVAG 447
>gi|383191881|ref|YP_005202009.1| putative Zn-dependent protease-like protein [Rahnella aquatilis CIP
78.65 = ATCC 33071]
gi|371590139|gb|AEX53869.1| putative Zn-dependent protease-like protein [Rahnella aquatilis CIP
78.65 = ATCC 33071]
Length = 446
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/445 (39%), Positives = 270/445 (60%), Gaps = 9/445 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ +Q L AK G+ + + ++ G V R G+++ +E N+D + + +Y Q
Sbjct: 11 RKTLEQAVSQALELAKA-GSDAAEVAVSKTTGIGVSTRFGEVENVEFNSDGALGITVYYQ 69
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
+ K G++S++D ++ T+ AA +IAR+T+ D FAG+ D+ L + D L+ P
Sbjct: 70 NRK----GSASSTDLSPDAISRTVQAALDIARYTSPDPFAGVADKEMLAFDAPDLDLFHP 125
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
L D + +A R E A + I N E + + NSHG + Y ++H I
Sbjct: 126 EELDPDRSIELAARAEQAALQADKRITNTEGGSFNSHYGIRVFGNSHGMLQSYCSTRHSI 185
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S IA +M+RD YS L PE +G A+RT+SRL +K+ T + PVLF
Sbjct: 186 SASVIAEHEGDMERDYAYSIARKMSDLKDPEWVGAECARRTLSRLAPRKLPTMQAPVLFA 245
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+ +A L ISG S+YRKS+FL+DSLGK+I + I E PH+L S+ FD+E
Sbjct: 246 SEVATGLFGHLVGAISGGSIYRKSSFLLDSLGKQILPDWLTIEEHPHLLQGLASTPFDSE 305
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+T++R +VK+G++Q + ++ YSA+KLG++TTG++GG H+ I D+ ML+
Sbjct: 306 GVRTERRDIVKDGVLQNWLMTCYSARKLGLQTTGHAGGIHNWRIAGQ----GDDFAGMLR 361
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
K++ GL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L++M++ +VAI
Sbjct: 362 KLDKGLVVTELMGQGVSGVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNMVAI 421
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
GSD+ TR++ GS+L+ M IAG+
Sbjct: 422 GSDIETRSNIQCGSVLLPAMKIAGE 446
>gi|193063639|ref|ZP_03044727.1| protein PmbA [Escherichia coli E22]
gi|251787484|ref|YP_003001788.1| protease involved in Microcin B17 maturation and in sensitivity to
the DNA gyrase inhibitor LetD [Escherichia coli
BL21(DE3)]
gi|253775140|ref|YP_003037971.1| peptidase PmbA [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254164163|ref|YP_003047273.1| peptidase PmbA [Escherichia coli B str. REL606]
gi|254290913|ref|YP_003056663.1| peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Escherichia coli BL21(DE3)]
gi|260847068|ref|YP_003224846.1| peptidase [Escherichia coli O103:H2 str. 12009]
gi|415797651|ref|ZP_11498119.1| modulator of DNA gyrase family protein [Escherichia coli E128010]
gi|417175607|ref|ZP_12005403.1| protein PmbA [Escherichia coli 3.2608]
gi|417184548|ref|ZP_12010145.1| protein PmbA [Escherichia coli 93.0624]
gi|417230784|ref|ZP_12032200.1| protein PmbA [Escherichia coli 5.0959]
gi|417253212|ref|ZP_12044971.1| protein PmbA [Escherichia coli 4.0967]
gi|417626556|ref|ZP_12276838.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_H.1.8]
gi|417669907|ref|ZP_12319436.1| modulator of DNA gyrase family protein [Escherichia coli STEC_O31]
gi|421776225|ref|ZP_16212830.1| protein PmbA [Escherichia coli AD30]
gi|432763136|ref|ZP_19997593.1| protein pmbA [Escherichia coli KTE48]
gi|442596810|ref|ZP_21014613.1| TldE protein, part of TldE/TldD proteolytic complex [Escherichia
coli O5:K4(L):H4 str. ATCC 23502]
gi|192930626|gb|EDV83232.1| protein PmbA [Escherichia coli E22]
gi|242379757|emb|CAQ34584.1| protease involved in Microcin B17 maturation and in sensitivity to
the DNA gyrase inhibitor LetD [Escherichia coli
BL21(DE3)]
gi|253326184|gb|ACT30786.1| peptidase U62 modulator of DNA gyrase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253976066|gb|ACT41737.1| predicted peptidase required for the maturation and secretion of
the antibiotic peptide MccB17 [Escherichia coli B str.
REL606]
gi|253980222|gb|ACT45892.1| predicted peptidase required for the maturation and secretion of
the antibiotic peptide MccB17 [Escherichia coli
BL21(DE3)]
gi|257762215|dbj|BAI33712.1| predicted peptidase [Escherichia coli O103:H2 str. 12009]
gi|323162032|gb|EFZ47904.1| modulator of DNA gyrase family protein [Escherichia coli E128010]
gi|345369448|gb|EGX01432.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_H.1.8]
gi|386178299|gb|EIH55778.1| protein PmbA [Escherichia coli 3.2608]
gi|386183385|gb|EIH66133.1| protein PmbA [Escherichia coli 93.0624]
gi|386205365|gb|EII09875.1| protein PmbA [Escherichia coli 5.0959]
gi|386217143|gb|EII33632.1| protein PmbA [Escherichia coli 4.0967]
gi|397782362|gb|EJK93230.1| modulator of DNA gyrase family protein [Escherichia coli STEC_O31]
gi|408458614|gb|EKJ82400.1| protein PmbA [Escherichia coli AD30]
gi|431314211|gb|ELG02163.1| protein pmbA [Escherichia coli KTE48]
gi|441654710|emb|CCQ00526.1| TldE protein, part of TldE/TldD proteolytic complex [Escherichia
coli O5:K4(L):H4 str. ATCC 23502]
Length = 450
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AGL D+ L + D L+ P +S DDA +A R E A
Sbjct: 92 TVQAALDIARYTSPDPCAGLADKELLAFDAPDLDLFHPAEVSPDDAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|322834686|ref|YP_004214713.1| peptidase U62 modulator of DNA gyrase [Rahnella sp. Y9602]
gi|321169887|gb|ADW75586.1| peptidase U62 modulator of DNA gyrase [Rahnella sp. Y9602]
Length = 448
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/445 (39%), Positives = 270/445 (60%), Gaps = 9/445 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ +Q L AK G+ + + ++ G V R G+++ +E N+D + + +Y Q
Sbjct: 13 RKTLEQAVSQALELAKA-GSDAAEVAVSKTTGIGVSTRFGEVENVEFNSDGALGITVYYQ 71
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
+ K G++S++D ++ T+ AA +IAR+T+ D FAG+ D+ L + D L+ P
Sbjct: 72 NRK----GSASSTDLSPDAISRTVQAALDIARYTSPDPFAGVADKEMLAFDAPDLDLFHP 127
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
L D + +A R E A + I N E + + NSHG + Y ++H I
Sbjct: 128 EELDPDRSIELAARAEQAALQADKRITNTEGGSFNSHYGIRVFGNSHGMLQSYCSTRHSI 187
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S IA +M+RD YS L PE +G A+RT+SRL +K+ T + PVLF
Sbjct: 188 SASVIAEHEGDMERDYAYSIARKMSDLKDPEWVGAECARRTLSRLAPRKLPTMQAPVLFA 247
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+ +A L ISG S+YRKS+FL+DSLGK+I + I E PH+L S+ FD+E
Sbjct: 248 SEVATGLFGHLVGAISGGSIYRKSSFLLDSLGKQILPEWLTIEEHPHLLQGLASTPFDSE 307
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+T++R +VK+G++Q + ++ YSA+KLG++TTG++GG H+ I D+ ML+
Sbjct: 308 GVRTERRDIVKDGVLQNWLMTCYSARKLGLQTTGHAGGIHNWRIAGQ----GDDFAGMLR 363
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
K++ GL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L++M++ +VAI
Sbjct: 364 KLDKGLVVTELMGQGVSGVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNMVAI 423
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
GSD+ TR++ GS+L+ M IAG+
Sbjct: 424 GSDIETRSNIQCGSVLLPAMKIAGE 448
>gi|389792831|ref|ZP_10196013.1| putative Zn-dependent protease-like protein [Rhodanobacter fulvus
Jip2]
gi|388435695|gb|EIL92592.1| putative Zn-dependent protease-like protein [Rhodanobacter fulvus
Jip2]
Length = 459
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 175/444 (39%), Positives = 268/444 (60%), Gaps = 8/444 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+LA+D++ A+ GAS + + + G SV VR G+++ +E D+ + +Y K
Sbjct: 22 LAELAEDVIRRARAAGASQAEVAASIDTGLSVNVRLGEVETVEHTRDRGFGLTVYFGQRK 81
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST+D SL T++ A IAR+T D AGL D + + D + PW
Sbjct: 82 ----GSASTADLHPDSLQATLDQACAIARYTEEDPAAGLADPARMADSFPDLDTWHPW-- 135
Query: 138 SIDDAKLIAYRCE-NEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
ID A+ IA E EA ++ I N++ GV Q + ANSHGF+ ++H +S+
Sbjct: 136 DIDTAQAIALGIEIEEAGRAHAGITNSDGAGVQAGQGLSVYANSHGFVGRERGTRHSLSL 195
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
S IA MQRD WY S +G AA+RT++R+ A+ +STR+CPVLF
Sbjct: 196 SLIAGDDDGMQRDYWYDSVRAAGDFISARALGDKAAERTLARMGARSLSTRQCPVLFAPE 255
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L+ +SG +LYR+++FL+D +GK + + + I E P + GS++FD EGV
Sbjct: 256 LARGLIGHLLSAVSGGALYRRASFLLDHVGKPVMPAWLNINERPRLPRGQGSANFDAEGV 315
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKT-KSSDNLKEMLKK 375
T+ +V+ G++ Y L +YSA+KLG+ +TGN+GG H+L++ + +S + ML++
Sbjct: 316 ATRDSALVEGGVLARYVLGSYSARKLGLASTGNAGGVHNLVVDAGSADQSRHDFASMLQR 375
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
+ TGLLVTE+MG G++ ITGDYS+GA G+W+ENG I Y VEE+TI+ L++MF IVA+G
Sbjct: 376 LGTGLLVTEVMGQGVSTITGDYSRGAAGFWVENGVIAYPVEEVTIAANLRDMFAGIVAVG 435
Query: 436 SDVLTRNSNTSGSILIENMIIAGK 459
+DV R+ +GSIL+E M +AG+
Sbjct: 436 TDVDPRSHILTGSILVERMTVAGE 459
>gi|422604972|ref|ZP_16676987.1| pmbA protein [Pseudomonas syringae pv. mori str. 301020]
gi|330888629|gb|EGH21290.1| pmbA protein [Pseudomonas syringae pv. mori str. 301020]
Length = 448
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 176/442 (39%), Positives = 269/442 (60%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+
Sbjct: 14 ELQEQVEQIIAEARRQGASACEVAVSVDQGLSTSVRQREVETVEFNRDQGFGITLYVGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++ +T+ AA IA T+ D +GL D + +DF LY W
Sbjct: 74 K----GSASTSATGADAIRETVAAALAIAEHTSEDESSGLADAALMAKEVMDFDLYHTWD 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + A A CE AF+ +S I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 130 ITPEQAIEKALTCEAAAFDADSRIKNADGTTLNTHQGCRVYGNSNGFVGGYASTRHSLSC 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L + IG AA R S L A+ + T + PVLF A
Sbjct: 190 VMIAEGEGQMQRDYWYDVNRQGELLADAQSIGRKAALRAASLLGARPVPTCEVPVLFAAE 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L F ISG +LYRKS+FL +LG+++F + I E PH+ + GSS+FD++G+
Sbjct: 250 LAGGLFGSFLGAISGGNLYRKSSFLEGALGQRLFPEWMTIDERPHLKHAMGSSAFDSDGL 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+ G + Y LSTYS +KLGM +T N+GG H+L + T S++ ++++M
Sbjct: 310 ATFAKPFVEGGDLVSYVLSTYSGRKLGMPSTANAGGVHNLFV----THGSEDQAALIRRM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GS
Sbjct: 366 GRGLLVTELMGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGS 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GS+LIE M +AG
Sbjct: 426 DLELRSNIRTGSVLIERMTVAG 447
>gi|110644596|ref|YP_672326.1| peptidase PmbA [Escherichia coli 536]
gi|300988330|ref|ZP_07178626.1| TldD/PmbA family protein [Escherichia coli MS 200-1]
gi|422374922|ref|ZP_16455196.1| TldD/PmbA family protein [Escherichia coli MS 60-1]
gi|432473626|ref|ZP_19715657.1| protein pmbA [Escherichia coli KTE206]
gi|432716132|ref|ZP_19951151.1| protein pmbA [Escherichia coli KTE8]
gi|433080489|ref|ZP_20266996.1| protein pmbA [Escherichia coli KTE131]
gi|110346188|gb|ABG72425.1| PmbA protein [Escherichia coli 536]
gi|300305948|gb|EFJ60468.1| TldD/PmbA family protein [Escherichia coli MS 200-1]
gi|324013745|gb|EGB82964.1| TldD/PmbA family protein [Escherichia coli MS 60-1]
gi|430994552|gb|ELD10878.1| protein pmbA [Escherichia coli KTE206]
gi|431249860|gb|ELF44014.1| protein pmbA [Escherichia coli KTE8]
gi|431591594|gb|ELI62509.1| protein pmbA [Escherichia coli KTE131]
Length = 450
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 267/423 (63%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R GK++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGKVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPADVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R +VK+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIVKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|270156776|ref|ZP_06185433.1| putative peptide maturation protein PmbA [Legionella longbeachae
D-4968]
gi|289164775|ref|YP_003454913.1| hypothetical protein LLO_1442 [Legionella longbeachae NSW150]
gi|269988801|gb|EEZ95055.1| putative peptide maturation protein PmbA [Legionella longbeachae
D-4968]
gi|288857948|emb|CBJ11808.1| Hypothetical protein of unknown function [Legionella longbeachae
NSW150]
Length = 452
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 185/453 (40%), Positives = 287/453 (63%), Gaps = 8/453 (1%)
Query: 7 NRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
N S+ S ++ +L ++L A+K GA+ + + GFSV VR +++ + + DK
Sbjct: 8 NNSEVHKSTTDLTRLMNEVLELARKEGATDAMVAVTNDKGFSVDVRMREVETVAFSEDKG 67
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +YI GK+ G +S++D +L + AA +IAR +A D GL D+ + N
Sbjct: 68 IGLTVYI--GKRK--GGASSTDTSPAALETMVKAACDIARVSAEDPCFGLADKELMTTNY 123
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D LY PW ++ A +A +CEN A + + I N++ V+T +SH AN+HG
Sbjct: 124 PDLDLYHPWDINPQQAIDLALKCENYALSLDKRITNSDGVNVSTHESHHGFANTHGGCGF 183
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
++H +S S IA +G++MQRD Y++ K L ++ A +R +SRL A++I+T
Sbjct: 184 IHSTRHSLSCSLIAKEGEDMQRDYDYTTVRHAKDLVDSHLVAKNAVERAVSRLGAQQIAT 243
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
+ P++F + ++ L + F ISG++LYRK+TFL+DS+G+++F I+I E PH+LG+
Sbjct: 244 QTIPIIFSSRISSSLFSSFINAISGSNLYRKNTFLLDSIGQQVFPEFIRIYEQPHLLGAL 303
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
GSS FD+EGV T+ L+V+ G + Y L +YSA+KLG+KTT NS G H+L I ++
Sbjct: 304 GSSPFDSEGVPTRPNLIVEKGRVMQYVLGSYSARKLGLKTTANSDGVHNLTI----DPTA 359
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+L ++LK M GLLVTELMG GIN +TGDYS+GA GYW+ENG IQY V+E+TI+G L++
Sbjct: 360 GDLADLLKIMGKGLLVTELMGQGINGVTGDYSRGASGYWVENGMIQYPVDEVTIAGNLKD 419
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+FK I+A+GSD+ + GS+LI M++AGK
Sbjct: 420 IFKGILAVGSDINPNIATRCGSMLINKMMVAGK 452
>gi|194426680|ref|ZP_03059234.1| protein PmbA [Escherichia coli B171]
gi|194437808|ref|ZP_03069903.1| protein PmbA [Escherichia coli 101-1]
gi|419292487|ref|ZP_13834565.1| modulator of DNA gyrase family protein [Escherichia coli DEC11A]
gi|419297838|ref|ZP_13839866.1| modulator of DNA gyrase family protein [Escherichia coli DEC11B]
gi|419303308|ref|ZP_13845293.1| protein pmbA [Escherichia coli DEC11C]
gi|419309360|ref|ZP_13851242.1| protein pmbA [Escherichia coli DEC11D]
gi|419314317|ref|ZP_13856168.1| protein pmbA [Escherichia coli DEC11E]
gi|419319883|ref|ZP_13861672.1| protein pmbA [Escherichia coli DEC12A]
gi|419326192|ref|ZP_13867868.1| modulator of DNA gyrase family protein [Escherichia coli DEC12B]
gi|419332008|ref|ZP_13873593.1| protein pmbA [Escherichia coli DEC12C]
gi|419337668|ref|ZP_13879165.1| modulator of DNA gyrase family protein [Escherichia coli DEC12D]
gi|419342935|ref|ZP_13884378.1| modulator of DNA gyrase family protein [Escherichia coli DEC12E]
gi|419372895|ref|ZP_13913993.1| protein pmbA [Escherichia coli DEC14A]
gi|419872622|ref|ZP_14394648.1| peptidase PmbA [Escherichia coli O103:H2 str. CVM9450]
gi|420394430|ref|ZP_14893666.1| modulator of DNA gyrase family protein [Escherichia coli EPEC
C342-62]
gi|422792898|ref|ZP_16845596.1| PmbA protein [Escherichia coli TA007]
gi|194415419|gb|EDX31687.1| protein PmbA [Escherichia coli B171]
gi|194423304|gb|EDX39296.1| protein PmbA [Escherichia coli 101-1]
gi|323970509|gb|EGB65768.1| PmbA protein [Escherichia coli TA007]
gi|378123258|gb|EHW84676.1| modulator of DNA gyrase family protein [Escherichia coli DEC11A]
gi|378137067|gb|EHW98350.1| modulator of DNA gyrase family protein [Escherichia coli DEC11B]
gi|378142798|gb|EHX03998.1| protein pmbA [Escherichia coli DEC11D]
gi|378144666|gb|EHX05837.1| protein pmbA [Escherichia coli DEC11C]
gi|378153506|gb|EHX14590.1| protein pmbA [Escherichia coli DEC11E]
gi|378159342|gb|EHX20348.1| modulator of DNA gyrase family protein [Escherichia coli DEC12B]
gi|378163059|gb|EHX24014.1| protein pmbA [Escherichia coli DEC12A]
gi|378163934|gb|EHX24885.1| protein pmbA [Escherichia coli DEC12C]
gi|378177678|gb|EHX38467.1| modulator of DNA gyrase family protein [Escherichia coli DEC12D]
gi|378180897|gb|EHX41577.1| modulator of DNA gyrase family protein [Escherichia coli DEC12E]
gi|378211325|gb|EHX71665.1| protein pmbA [Escherichia coli DEC14A]
gi|388333825|gb|EIL00436.1| peptidase PmbA [Escherichia coli O103:H2 str. CVM9450]
gi|391308490|gb|EIQ66188.1| modulator of DNA gyrase family protein [Escherichia coli EPEC
C342-62]
Length = 446
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AGL D+ L + D L+ P +S DDA +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGLADKELLAFDAPDLDLFHPAEVSPDDAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|404399836|ref|ZP_10991420.1| hypothetical protein PfusU_08742 [Pseudomonas fuscovaginae UPB0736]
Length = 448
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 176/450 (39%), Positives = 265/450 (58%), Gaps = 5/450 (1%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNV 69
+F Y++ + ++A D++ A GAS + +E G SV V G+++ Q+ +++
Sbjct: 4 QFAYTEEQLAEVAHDLIAQAHAAGASDVKVSLSEMAGLSVEVMDGRVNTRSQHAKSGLSL 63
Query: 70 IIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDF 129
++ D + G + ++DF +L + A +IAR+T D AGL D + L D
Sbjct: 64 TVFRGDRQ----GTTHSTDFSAVNLQRMVGKALDIARYTNEDRHAGLVDGDGLSRFYADL 119
Query: 130 KLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPF 189
KL PW LSI++A A+R E V ++ ++T +S F L S GF
Sbjct: 120 KLDNPWDLSIEEALEHAHRVE-AGIRAVGRDVRSDGASLSTSRSQFQLVTSRGFCRTATR 178
Query: 190 SKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKC 249
+ H IS IA + + + D W P +L PE G AA+ + L IS+R C
Sbjct: 179 TDHNISAKVIANRDGKNKPDAWTDYQVAPHRLQAPEATGERAARSALEALGGCSISSRSC 238
Query: 250 PVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSS 309
PVLF A L F + ++G L R S+FL SLG+ IF+ HI ++EDP ++G S+
Sbjct: 239 PVLFAPKAAHSLTQHFFQAVNGGELSRGSSFLRGSLGQVIFAEHIDVLEDPFLVGGAASA 298
Query: 310 SFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNL 369
FD +GV Q+R VVK+G++ GYFL+ YSA++LGM +TGN+ GAH+L + S T+ D+L
Sbjct: 299 CFDTDGVVGQRRAVVKHGMVSGYFLNAYSARRLGMVSTGNAQGAHNLTLKSRLTRPEDDL 358
Query: 370 KEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFK 429
ML+K++TGLLVT LMGDG+ +GDYS+ A G+W+ENG+IQ+ VE+ITI+G L+ MF
Sbjct: 359 PAMLRKLHTGLLVTHLMGDGVRLASGDYSRAAQGFWVENGQIQFPVEQITIAGHLREMFA 418
Query: 430 QIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVA+GSD LT + +SGS+LI+ + I G+
Sbjct: 419 GIVAVGSDTLTLGNISSGSVLIDQLRIGGQ 448
>gi|398938697|ref|ZP_10667999.1| putative Zn-dependent protease-like protein [Pseudomonas sp.
GM41(2012)]
gi|398165169|gb|EJM53289.1| putative Zn-dependent protease-like protein [Pseudomonas sp.
GM41(2012)]
Length = 448
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 180/441 (40%), Positives = 271/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D + + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAKHTSEDEASGLADAALMAKDLQDFDLFHEWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF +S I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEQALACEAAAFATDSRIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L PE IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGNLLASPESIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG SLYRKS+FL +LG+K+F + I E PH++ + GSS+FD +G+
Sbjct: 251 AGGLFGSFLSAISGGSLYRKSSFLEGTLGQKLFPEWLTIDERPHLMRALGSSAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TYS +KLGM +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVEKGELVSYILGTYSGRKLGMPSTANAGGVHNLFV----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGQGLNMVTGDYSRGAAGYWVENGEIQFAVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|424791261|ref|ZP_18217727.1| Peptidase U62 protein PmbA [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422797632|gb|EKU25859.1| Peptidase U62 protein PmbA [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 469
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 166/441 (37%), Positives = 262/441 (59%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+AQ ML A+++GAS + + +E G V VR G ++ +E D+ + + +Y K
Sbjct: 35 LSDIAQRMLARARELGASQAEVSCSEDRGLDVNVRLGAVETVEATRDRGIGITVYFGQRK 94
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST+D + SL T+ A IAR+T D AGL D + + + + PW L
Sbjct: 95 ----GSASTADLHESSLEATVAQACAIARYTEDDVAAGLADAALMARDIPELDRWHPWAL 150
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
++A +A CE + + + N++ + +S + ANSHGF+ + H I S
Sbjct: 151 EAEEAIELALVCEAAGRDADPRVANSDGASAGSSESLSVYANSHGFVGRERSTHHSIGCS 210
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
I +G MQRD+WYSS + L+ P IG AA+RT++RL+ + + T + PVLF +
Sbjct: 211 LIVGQGDAMQRDHWYSSALAREDLEAPAAIGRRAAERTVARLQPRSLPTGELPVLFAPEM 270
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G ++F I E PH+ S++FD EGV
Sbjct: 271 ARSLVGHLLGAVSGGALYRRASFLLDSVGTRLFPDWFAIDERPHLRRGLRSAAFDGEGVA 330
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T+ ++ G++Q Y L +YSA+KLG++TT N+GG H+L + +N +D+L + +
Sbjct: 331 TRAAPLIAGGVLQRYVLGSYSARKLGLQTTANAGGVHNLQVAAN----ADDLASIAAGIP 386
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+WIENG I Y V+E+TI+G L+ MF++I A+G D
Sbjct: 387 RGLLVTELMGSGVNPVTGDYSRGAGGFWIENGAIAYPVDEVTIAGNLREMFQRIEAVGRD 446
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R+ G++L+ M +AG
Sbjct: 447 IDVRSHVHIGAVLVGKMTVAG 467
>gi|404399134|ref|ZP_10990718.1| protein tldE, (protein pmbA) [Pseudomonas fuscovaginae UPB0736]
Length = 448
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 268/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + +L A++ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQILAEARRQGASACEVAVSVEQGLSTSVRQREVETVEFNRDQGFGITLYLGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IAR T+ D +GL D + DF L+ W +
Sbjct: 75 ----GSASTSASGAEAIRETVAAALAIARHTSEDECSGLADAALMAKEIKDFDLFHEWNI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF +S I N + T ++T Q + NSHGF++G ++H +S
Sbjct: 131 TPEQAIERALICEAAAFEADSRIKNADGTTLSTSQGCRVYGNSHGFIAGSASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N + L IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEGDGQMQRDYWYDVNRQGELLVDAVSIGRKAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL +LG+++F + I E PH++ + SSSFD +G+
Sbjct: 251 AGGLFGSFLSAISGGNLYRKSSFLEGALGQRLFPEWLTIDERPHLMRTMSSSSFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y L TYS +KLG+ +T N+GG H+L + T ++ ++++M
Sbjct: 311 TYAKPFVENGTLVSYILGTYSGRKLGLPSTANAGGVHNLFV----THGVEDQDALIRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GSD
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGSD 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|191170727|ref|ZP_03032279.1| protein PmbA [Escherichia coli F11]
gi|190908951|gb|EDV68538.1| protein PmbA [Escherichia coli F11]
Length = 446
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 267/423 (63%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R GK++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGKVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPADVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R +VK+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIVKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|301024462|ref|ZP_07188141.1| TldD/PmbA family protein [Escherichia coli MS 69-1]
gi|419919301|ref|ZP_14437458.1| peptidase PmbA [Escherichia coli KD2]
gi|300396575|gb|EFJ80113.1| TldD/PmbA family protein [Escherichia coli MS 69-1]
gi|388388150|gb|EIL49743.1| peptidase PmbA [Escherichia coli KD2]
Length = 450
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 267/423 (63%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R +VK+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIVKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|259907209|ref|YP_002647565.1| peptidase PmbA [Erwinia pyrifoliae Ep1/96]
gi|387869935|ref|YP_005801305.1| protein pmbA [Erwinia pyrifoliae DSM 12163]
gi|224962831|emb|CAX54290.1| PmbA protease involved in Microcin B17 maturation and sensitivity
to the DNA gyrase inhibitor LetD [Erwinia pyrifoliae
Ep1/96]
gi|283477018|emb|CAY72910.1| Protein pmbA [Erwinia pyrifoliae DSM 12163]
Length = 446
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 176/455 (38%), Positives = 274/455 (60%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K S+ + +Q L AK + + + + G SV R G ++ +E N+D
Sbjct: 1 MKLLSQVAEQRKTLEQAVATALELAKA-SSDGAEVAVTKTTGISVSTRYGSVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q+ K G++S++D ++ T+ AA +IAR+T++D +AG+ D + L
Sbjct: 60 GALGITVYHQNRK----GSASSTDLSHDAIQRTVQAALDIARYTSADPYAGVADPDLLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
D L+ P + D A +A R E A + I N E + + NSHG +
Sbjct: 116 TAPDLDLFHPSEIDADRAIELAARAEQAALKSDKRITNTEGGSFNSHVGIKVFGNSHGMI 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
GY S+H +S IA + +M+RD Y+ + L PE +G A+RT+SRL +K+
Sbjct: 176 QGYCSSRHSLSSCVIAEENGDMERDYAYTIGRAMEDLKSPEYVGEECARRTLSRLSPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
ST K PV+F A +A L ISG S+YRKSTFL+DSLG++I + I E PH+L
Sbjct: 236 STMKAPVMFAAEVATGLFGHLVGAISGGSVYRKSTFLLDSLGQQILPEWLTIEEHPHLLK 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+TQ+R ++++G++Q + L++YSA+KLG+K+TG++GG H+ I
Sbjct: 296 GLASTPFDSEGVRTQRRDIIQDGVLQNWLLTSYSARKLGLKSTGHAGGIHNWRIAGQ--- 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ +MLK++ TGLLVTELMG G++ ITGDYS+GA G+W+ENG IQY V EITI+G L
Sbjct: 353 -GHSFDDMLKQLGTGLLVTELMGQGVSGITGDYSRGASGFWVENGVIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M++ +V++GSD TR++ GS+L+ M IAG+
Sbjct: 412 KDMWRNMVSVGSDTETRSNIQCGSVLLPEMKIAGQ 446
>gi|218551529|ref|YP_002385321.1| peptidase PmbA [Escherichia fergusonii ATCC 35469]
gi|218359071|emb|CAQ91732.1| peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Escherichia fergusonii ATCC
35469]
Length = 450
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 176/452 (38%), Positives = 281/452 (62%), Gaps = 12/452 (2%)
Query: 12 IYSKSEFQQ-LAQDMLNYAKKIGASHS---SIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
+ S+ E Q+ + +D ++ A ++ + S + ++ G SV R G+++ +E N+D +
Sbjct: 7 VISQVEAQRKILEDAVSTALELASGKSDGAEVAVSKTTGISVSTRYGEVENVEFNSDGAL 66
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
+ +Y Q+ K G++S++D +++ T+ AA +IAR+T+ D AG+ D+ L +
Sbjct: 67 GITVYHQNRK----GSASSTDLSPQAIARTVQAALDIARYTSPDPCAGVADKELLAFDAP 122
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ P +S D+A +A R E A + I N E + + NSHG + GY
Sbjct: 123 DLDLFHPAEVSPDEAIELAARAEQAALQADKRITNTEGGSFNSHYGVKVFGNSHGMLQGY 182
Query: 188 PFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTR 247
++H +S IA + +M+RD Y+ L PE +G A+RT+SRL +K+ST
Sbjct: 183 CSTRHSLSSCVIAEENGDMERDYAYTIGRAMSDLQTPEWVGADCARRTLSRLSPRKLSTM 242
Query: 248 KCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFG 307
K PV+F +A L I+G S+YRKSTFL+DSLGK+I + I E PH+L
Sbjct: 243 KAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFLLDSLGKQILPDWLTIEEHPHLLKGLA 302
Query: 308 SSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD 367
S+ FD+EGV+T++R +VK+GI+ + L++YSA+KLG+K+TG++GG H+ I
Sbjct: 303 STPFDSEGVRTERRDIVKDGILTQWLLTSYSARKLGLKSTGHAGGIHNWRIAGQGL---- 358
Query: 368 NLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNM 427
+ ++MLK+M TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L++M
Sbjct: 359 SFEQMLKEMGTGLVVTELMGQGVSAITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDM 418
Query: 428 FKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++ IV +G+D+ TR++ GS+L+ M IAG+
Sbjct: 419 WRNIVTVGNDIETRSNIQCGSVLLPEMKIAGQ 450
>gi|399003708|ref|ZP_10706363.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM18]
gi|398122088|gb|EJM11694.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM18]
Length = 448
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 179/441 (40%), Positives = 271/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEAKRQGASACEVAVSLEQGLSTTVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D AGL D + + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAKHTSEDEAAGLADAALMAKDLQDFDLFHQWNI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF +S I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEQALACEAAAFAADSRIKNADGTTLSTHQGCRVYGNSHGFVGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L PE IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGNLLASPESIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG SLYRKS+FL +LG+K+F + I E PH++ + GSS+FD +G+
Sbjct: 251 AGGLFGSFLSAISGGSLYRKSSFLEGTLGQKLFPEWLTIDERPHLMRALGSSAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TYS +KLGM +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVEKGELVSYVLGTYSGRKLGMPSTANAGGVHNLFV----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MFKQI+A+G+D
Sbjct: 367 RGLLVTELMGQGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFKQIIAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|387121422|ref|YP_006287305.1| PmbA protein [Aggregatibacter actinomycetemcomitans D7S-1]
gi|385875914|gb|AFI87473.1| PmbA protein [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 453
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 180/461 (39%), Positives = 287/461 (62%), Gaps = 12/461 (2%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDM---LNYAKKIGASHSSIEFNEGNGFSVFVRKGKID 57
M+Q +S + + E QQL + + A+K GA+ + + + G SV R +I+
Sbjct: 1 MQQKTLEKSTALLRQQE-QQLRDAVSLAIEIAQKAGAT-AEVGVTKSGGLSVSTRLREIE 58
Query: 58 VIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLP 117
+E NND + + +Y+ K GN+STSD ++ T+ AA IA++T+ D+ AGL
Sbjct: 59 NVEFNNDGALGISVYLGQQK----GNASTSDLTPDAIKSTVEAALAIAKYTSPDDCAGLA 114
Query: 118 DENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLL 177
D++ + + D LY + +D A +A E A ++ IVN+E +
Sbjct: 115 DKDLMAFDAPDLALYHAAEIEVDHAMQLALETEKAALEHDARIVNSEGASFNAHTGVRVY 174
Query: 178 ANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTIS 237
NSHG + Y S++ +S S IA +++RD Y+ D +L QP+ +G +AA++ I+
Sbjct: 175 GNSHGMLQSYLSSRYSLSCSVIAEHQTQLERDYEYTVARDMTQLAQPKWVGKHAAQKAIA 234
Query: 238 RLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQII 297
RL+ +K++T++ PV+F +A L++ A ISG SLYRK++FL+D L K++ +I+
Sbjct: 235 RLQPQKLATQQAPVIFLNDVATGLISYLATAISGGSLYRKASFLLDHLDKQVLPDWFEIV 294
Query: 298 EDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLI 357
E PH+LG S+ FD+EGVKTQ +++NGI+Q Y L++YS +KLGM++ G++GG H+ +
Sbjct: 295 ERPHLLGQLASTPFDSEGVKTQDMDIIRNGILQTYLLTSYSGRKLGMQSNGHAGGIHNWL 354
Query: 358 IISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEE 417
+ K SS L +L++MN GLLVTE+MG G+N ++GDYS+GA G+W+ENG+IQY V E
Sbjct: 355 V---KANSSGKLTALLRQMNRGLLVTEVMGQGVNPVSGDYSRGAAGFWVENGEIQYPVAE 411
Query: 418 ITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
ITI+G+L M + IVA+G D+ R++ +GSIL+ENM I+G
Sbjct: 412 ITIAGQLPEMLRNIVAVGDDIEHRSNIQTGSILLENMKISG 452
>gi|78048476|ref|YP_364651.1| modulator of DNA gyrase; peptidase U62 protein PmbA [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|78036906|emb|CAJ24599.1| putative modulator of DNA gyrase; peptidase U62 protein PmbA
[Xanthomonas campestris pv. vesicatoria str. 85-10]
Length = 455
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 173/441 (39%), Positives = 264/441 (59%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++Q +L A+ GA+ + + +E G V VR G ++ +E D+ + V +Y GK
Sbjct: 21 LTDISQRLLERARAAGATQAEVSCSEERGLDVNVRLGDVETVESTRDRGIAVTVYF--GK 78
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ G++ST+D SL T+ A IARFT D AGL D + + + PW L
Sbjct: 79 R--KGSASTADLQDSSLESTVAQACAIARFTEDDVAAGLADPELMAREFPELDSWHPWAL 136
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A +A CE + ++ I N++ +T S + ANSHGF+ + H IS +
Sbjct: 137 DADTAVDLALACETAGRDADARISNSDGASASTGLSLSVYANSHGFIGRERGTHHSISCA 196
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD WYSS + L+ P+ IG +AA RT++RL+ + + T + PVLF +
Sbjct: 197 LIAGQGDGMQRDGWYSSALAREDLEAPDAIGRHAAARTVARLQPRSLPTGQLPVLFAPEV 256
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G +F I E PH+ S++FD EGV
Sbjct: 257 ARSLVGHLLGAVSGGALYRRASFLLDSVGSTLFPDWFNIEELPHLRRGLRSAAFDGEGVA 316
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T++ ++ +G++Q Y L +YSA+KLG++TT N+GG H+L + +N + +L M+ M+
Sbjct: 317 TRRSALISDGVLQRYVLGSYSARKLGLQTTANAGGVHNLQVTAN----AGDLASMIAGMS 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG+G+N +TG+YS+GA G+WIENG I Y V+ +TI+G L++MF I A+GSD
Sbjct: 373 RGLLVTELMGNGVNPVTGNYSRGAGGFWIENGVIAYPVDGLTIAGNLRDMFAGIEAVGSD 432
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ GS+LI M +AG
Sbjct: 433 VDPRSHVKIGSVLINRMTVAG 453
>gi|411011846|ref|ZP_11388175.1| protein PmbA [Aeromonas aquariorum AAK1]
Length = 447
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 184/443 (41%), Positives = 266/443 (60%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ + + + L+ AK +GAS + + ++ G SV R +++ IE N D + + +Y +D
Sbjct: 12 AHLEAVVAEALDIAKGLGASLAEVSISKQTGLSVNTRGCELESIEFNKDGALGIAVY-RD 70
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
G K G+SST+D ++ + AA IAR T+ D AGL D + L N D +L P
Sbjct: 71 GCK---GSSSTTDLSPSAIRAAVEAAMEIARHTSPDECAGLADADLLAWNAPDLQLCHPV 127
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L +A CE A ++ I +++ G ++ + NSHGF+ GY S++ +S
Sbjct: 128 ALDPQYGIELATECERLALGRDARIKHSDGAGFSSHLGIKVYGNSHGFVKGYAASRNSLS 187
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I +G +MQRD YSS+ L P+ I A +RT+SRL A+KISTR PVLF
Sbjct: 188 CVLIGEQGGDMQRDYGYSSSRTLDGLWSPQRIADEAVERTLSRLGARKISTRHAPVLFHP 247
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
A L ISG +LYRKS+FL+D LGK+I + I E PH+LG S+ FD EG
Sbjct: 248 DTAAGLWGHLVMAISGGNLYRKSSFLLDKLGKQILPEWLTIQEFPHLLGGLASTPFDGEG 307
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V T+ +V+NG + + L++YSA+KLG+ TTG++GG H+ + S + + MLK+
Sbjct: 308 VLTRDMDIVRNGELMSWLLTSYSARKLGLTTTGHAGGIHNWQVSS----TGQDFNGMLKE 363
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGLLVTELMG G+N + GDYS+GA G+W+ENG+I Y VEEITI+G L MF IVA+G
Sbjct: 364 MGTGLLVTELMGQGVNIVNGDYSRGAAGFWVENGEIAYPVEEITIAGNLAEMFSHIVAVG 423
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
SD R+S +GS+L+E+M +AG
Sbjct: 424 SDEDERSSLKTGSVLVESMKLAG 446
>gi|432683098|ref|ZP_19918442.1| protein pmbA [Escherichia coli KTE143]
gi|431215843|gb|ELF13497.1| protein pmbA [Escherichia coli KTE143]
Length = 450
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 267/423 (63%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+SD AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSSDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|415757854|ref|ZP_11481487.1| PmbA protein [Aggregatibacter actinomycetemcomitans D17P-3]
gi|416031639|ref|ZP_11572579.1| PmbA protein [Aggregatibacter actinomycetemcomitans serotype a str.
H5P1]
gi|416049996|ref|ZP_11576812.1| PmbA protein [Aggregatibacter actinomycetemcomitans serotype d str.
I63B]
gi|429734655|ref|ZP_19268662.1| protein PmbA [Aggregatibacter actinomycetemcomitans Y4]
gi|347990991|gb|EGY32505.1| PmbA protein [Aggregatibacter actinomycetemcomitans serotype d str.
I63B]
gi|348001233|gb|EGY41985.1| PmbA protein [Aggregatibacter actinomycetemcomitans serotype a str.
H5P1]
gi|348655350|gb|EGY70809.1| PmbA protein [Aggregatibacter actinomycetemcomitans D17P-3]
gi|429151501|gb|EKX94367.1| protein PmbA [Aggregatibacter actinomycetemcomitans Y4]
Length = 453
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 180/461 (39%), Positives = 287/461 (62%), Gaps = 12/461 (2%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDM---LNYAKKIGASHSSIEFNEGNGFSVFVRKGKID 57
M+Q +S + + E QQL + + A+K GA+ + + + G SV R +I+
Sbjct: 1 MQQKTLEKSTALLRQQE-QQLRDAVSLAIEIAQKAGAT-AEVGVTKSGGLSVSTRLREIE 58
Query: 58 VIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLP 117
+E NND + + +Y+ K GN+STSD ++ T+ AA IA++T+ D+ AGL
Sbjct: 59 NVEFNNDGALGISVYLGQQK----GNASTSDLTPDAIKSTVEAALAIAKYTSPDDCAGLA 114
Query: 118 DENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLL 177
D++ + + D LY + +D A +A E A ++ IVN+E +
Sbjct: 115 DKDLMAFDAPDLALYHAAEIEVDHAMQLALETEKAALEHDARIVNSEGASFNAHTGVRVY 174
Query: 178 ANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTIS 237
NSHG + Y S++ +S S IA +++RD Y+ D +L QP+ +G +AA++ I+
Sbjct: 175 GNSHGMLQSYLSSRYSLSCSVIAEHQTQLERDYEYTVARDMTQLAQPKWVGKHAAQKAIA 234
Query: 238 RLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQII 297
RL+ +K++T++ PV+F +A L++ A ISG SLYRK++FL+D L K++ +I+
Sbjct: 235 RLQPQKLATQQAPVIFLNDVATGLISHLATAISGGSLYRKASFLLDHLDKQVLPDWFEIV 294
Query: 298 EDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLI 357
E PH+LG S+ FD+EGVKTQ +++NGI+Q Y L++YS +KLGM++ G++GG H+ +
Sbjct: 295 ERPHLLGQLASTPFDSEGVKTQDMDIIRNGILQTYLLTSYSGRKLGMQSNGHAGGIHNWL 354
Query: 358 IISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEE 417
+ K SS L +L++MN GLLVTE+MG G+N ++GDYS+GA G+W+ENG+IQY V E
Sbjct: 355 V---KANSSGKLTALLRQMNRGLLVTEVMGQGVNPVSGDYSRGAAGFWVENGEIQYPVAE 411
Query: 418 ITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
ITI+G+L M + IVA+G D+ R++ +GSIL+ENM I+G
Sbjct: 412 ITIAGQLPEMLRNIVAVGDDIEHRSNIQTGSILLENMKISG 452
>gi|170681431|ref|YP_001746637.1| peptidase PmbA [Escherichia coli SMS-3-5]
gi|170519149|gb|ACB17327.1| protein PmbA [Escherichia coli SMS-3-5]
Length = 450
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 267/423 (63%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R +VK+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIVKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IVA+G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVAVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|388546271|ref|ZP_10149547.1| protein TldE [Pseudomonas sp. M47T1]
gi|388275508|gb|EIK95094.1| protein TldE [Pseudomonas sp. M47T1]
Length = 448
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 170/441 (38%), Positives = 269/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIVAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D + + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAKHTSEDEASGLADADLMAREQPDFDLFHAWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
S + A A CE AF+ ++ I N + T +++ Q + NSHGF+ GY ++H +S
Sbjct: 131 SPEQAIERALACEAAAFDADARIKNADGTTLSSHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY + + L IG AA+R RL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVSRQGELLLDAAAIGQRAAQRAAGRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F +SG +LYRKS+FL ++G+ +F + + E PH++ + GSS+FD +G+
Sbjct: 251 AGGLFGSFLSAVSGGNLYRKSSFLEGAMGQMLFPEWLTLDERPHLMRAMGSSAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y LSTYS +KLGM +T N+GG H+L + T + ++K+M
Sbjct: 311 TYAKPFVENGRLVSYVLSTYSGRKLGMPSTANAGGVHNLFV----THGDQDQAALIKQMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MF+QIVA+G+D
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMKDMFRQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNVRTGSVLIERMTVAG 447
>gi|386719414|ref|YP_006185740.1| TldE/PmbA protein [Stenotrophomonas maltophilia D457]
gi|384078976|emb|CCH13571.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Stenotrophomonas maltophilia D457]
Length = 455
Score = 340 bits (872), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 168/438 (38%), Positives = 269/438 (61%), Gaps = 8/438 (1%)
Query: 21 LAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMF 80
L+Q +L+ A+ +GAS + + +E G V VR G+++ ++ D+ + V +Y K
Sbjct: 24 LSQQLLDRARALGASQAEVSCSEDRGLEVNVRLGEVETVQSTRDRGIAVTVYFGQRK--- 80
Query: 81 YGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSID 140
G++ST D + SL T+ A IAR T D AGL + + + + + PW L D
Sbjct: 81 -GSASTGDLNEASLAATVEQACAIARHTEDDPAAGLAEAALMATDFPELDGWHPWALQAD 139
Query: 141 DAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIA 200
+A +A CE ++ I N++ V++ QS + ANSHGF + H + + IA
Sbjct: 140 EAVDLALACEAAGREADAQIRNSDGASVSSMQSLSVYANSHGFFGRERGTHHSVGCALIA 199
Query: 201 IKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFE 260
+G MQRD WY+S + L+ ++G AA+RT++RL+ + ++T PVLF +A
Sbjct: 200 GQGDGMQRDGWYTSALAREDLEDVGLVGRRAAERTVARLQPRSLATGSMPVLFAPEVARS 259
Query: 261 LLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQK 320
L+ +SG +LYR+++FL+DS+G+++F +QI E PH+ S++FD +GV T+
Sbjct: 260 LVGHLLSAVSGGALYRQASFLLDSVGQRLFPEWMQIDELPHLRRGLRSAAFDGDGVATRS 319
Query: 321 RLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGL 380
+V++G++Q Y L +YSA+KLG++TT N+GG H+L + +N + L+E+ ++M GL
Sbjct: 320 SALVRDGVLQRYVLGSYSARKLGLQTTANAGGVHNLQLAAN----AGPLEEIARQMGDGL 375
Query: 381 LVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLT 440
LVTELMG G+N +TGDYS+GA G+ +ENG+IQY V+ +TI+G L+ MF I A+GSDV
Sbjct: 376 LVTELMGQGVNGVTGDYSRGAGGFRVENGEIQYPVDGVTIAGNLREMFSSIEAVGSDVDP 435
Query: 441 RNSNTSGSILIENMIIAG 458
R+ +GSIL+ M +AG
Sbjct: 436 RSHIRTGSILLGRMTVAG 453
>gi|215489580|ref|YP_002332011.1| peptidase PmbA [Escherichia coli O127:H6 str. E2348/69]
gi|218692623|ref|YP_002400835.1| peptidase PmbA [Escherichia coli ED1a]
gi|300916602|ref|ZP_07133324.1| TldD/PmbA family protein [Escherichia coli MS 115-1]
gi|306815547|ref|ZP_07449696.1| peptidase PmbA [Escherichia coli NC101]
gi|387832177|ref|YP_003352114.1| putative peptide maturation protein [Escherichia coli SE15]
gi|415837963|ref|ZP_11519946.1| modulator of DNA gyrase family protein [Escherichia coli RN587/1]
gi|422383618|ref|ZP_16463763.1| TldD/PmbA family protein [Escherichia coli MS 57-2]
gi|432384347|ref|ZP_19627262.1| protein pmbA [Escherichia coli KTE15]
gi|432385185|ref|ZP_19628088.1| protein pmbA [Escherichia coli KTE16]
gi|432395734|ref|ZP_19638528.1| protein pmbA [Escherichia coli KTE25]
gi|432409362|ref|ZP_19652059.1| protein pmbA [Escherichia coli KTE28]
gi|432419890|ref|ZP_19662452.1| protein pmbA [Escherichia coli KTE178]
gi|432443880|ref|ZP_19686200.1| protein pmbA [Escherichia coli KTE189]
gi|432444211|ref|ZP_19686525.1| protein pmbA [Escherichia coli KTE191]
gi|432498075|ref|ZP_19739859.1| protein pmbA [Escherichia coli KTE216]
gi|432516747|ref|ZP_19753957.1| protein pmbA [Escherichia coli KTE224]
gi|432532089|ref|ZP_19769101.1| protein pmbA [Escherichia coli KTE234]
gi|432551865|ref|ZP_19788599.1| protein pmbA [Escherichia coli KTE47]
gi|432614339|ref|ZP_19850486.1| protein pmbA [Escherichia coli KTE72]
gi|432648940|ref|ZP_19884720.1| protein pmbA [Escherichia coli KTE86]
gi|432658509|ref|ZP_19894199.1| protein pmbA [Escherichia coli KTE93]
gi|432697156|ref|ZP_19932341.1| protein pmbA [Escherichia coli KTE162]
gi|432701875|ref|ZP_19937013.1| protein pmbA [Escherichia coli KTE169]
gi|432708675|ref|ZP_19943746.1| protein pmbA [Escherichia coli KTE6]
gi|432721437|ref|ZP_19956368.1| protein pmbA [Escherichia coli KTE17]
gi|432725842|ref|ZP_19960739.1| protein pmbA [Escherichia coli KTE18]
gi|432730578|ref|ZP_19965440.1| protein pmbA [Escherichia coli KTE45]
gi|432739616|ref|ZP_19974339.1| protein pmbA [Escherichia coli KTE23]
gi|432762127|ref|ZP_19996594.1| protein pmbA [Escherichia coli KTE46]
gi|432892113|ref|ZP_20104592.1| protein pmbA [Escherichia coli KTE165]
gi|432902123|ref|ZP_20111871.1| protein pmbA [Escherichia coli KTE194]
gi|432916496|ref|ZP_20121437.1| protein pmbA [Escherichia coli KTE173]
gi|432923839|ref|ZP_20126346.1| protein pmbA [Escherichia coli KTE175]
gi|432941320|ref|ZP_20138986.1| protein pmbA [Escherichia coli KTE183]
gi|432969965|ref|ZP_20158849.1| protein pmbA [Escherichia coli KTE207]
gi|432979159|ref|ZP_20167953.1| protein pmbA [Escherichia coli KTE211]
gi|432988123|ref|ZP_20176822.1| protein pmbA [Escherichia coli KTE215]
gi|432988783|ref|ZP_20177457.1| protein pmbA [Escherichia coli KTE217]
gi|433016616|ref|ZP_20204930.1| protein pmbA [Escherichia coli KTE104]
gi|433026194|ref|ZP_20214151.1| protein pmbA [Escherichia coli KTE106]
gi|433036748|ref|ZP_20224376.1| protein pmbA [Escherichia coli KTE113]
gi|433085217|ref|ZP_20271650.1| protein pmbA [Escherichia coli KTE133]
gi|433099126|ref|ZP_20285281.1| protein pmbA [Escherichia coli KTE139]
gi|433103888|ref|ZP_20289944.1| protein pmbA [Escherichia coli KTE145]
gi|433108597|ref|ZP_20294542.1| protein pmbA [Escherichia coli KTE148]
gi|433113566|ref|ZP_20299401.1| protein pmbA [Escherichia coli KTE150]
gi|433146928|ref|ZP_20332045.1| protein pmbA [Escherichia coli KTE168]
gi|433191084|ref|ZP_20375158.1| protein pmbA [Escherichia coli KTE88]
gi|215267652|emb|CAS12109.1| predicted peptidase required for the maturation and secretion of
the antibiotic peptide MccB17 [Escherichia coli O127:H6
str. E2348/69]
gi|218430187|emb|CAR11190.2| peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Escherichia coli ED1a]
gi|281181334|dbj|BAI57664.1| putative peptide maturation protein [Escherichia coli SE15]
gi|300416114|gb|EFJ99424.1| TldD/PmbA family protein [Escherichia coli MS 115-1]
gi|305851209|gb|EFM51664.1| peptidase PmbA [Escherichia coli NC101]
gi|323189884|gb|EFZ75162.1| modulator of DNA gyrase family protein [Escherichia coli RN587/1]
gi|324005178|gb|EGB74397.1| TldD/PmbA family protein [Escherichia coli MS 57-2]
gi|430902143|gb|ELC24032.1| protein pmbA [Escherichia coli KTE15]
gi|430911307|gb|ELC32594.1| protein pmbA [Escherichia coli KTE16]
gi|430919242|gb|ELC40183.1| protein pmbA [Escherichia coli KTE25]
gi|430925511|gb|ELC46182.1| protein pmbA [Escherichia coli KTE28]
gi|430948667|gb|ELC68254.1| protein pmbA [Escherichia coli KTE178]
gi|430960032|gb|ELC78199.1| protein pmbA [Escherichia coli KTE189]
gi|430977500|gb|ELC94337.1| protein pmbA [Escherichia coli KTE191]
gi|431034179|gb|ELD46124.1| protein pmbA [Escherichia coli KTE216]
gi|431036931|gb|ELD47920.1| protein pmbA [Escherichia coli KTE224]
gi|431065563|gb|ELD74326.1| protein pmbA [Escherichia coli KTE234]
gi|431087564|gb|ELD93485.1| protein pmbA [Escherichia coli KTE47]
gi|431145365|gb|ELE47022.1| protein pmbA [Escherichia coli KTE72]
gi|431176889|gb|ELE76830.1| protein pmbA [Escherichia coli KTE86]
gi|431186855|gb|ELE86394.1| protein pmbA [Escherichia coli KTE93]
gi|431228980|gb|ELF25633.1| protein pmbA [Escherichia coli KTE162]
gi|431238908|gb|ELF33563.1| protein pmbA [Escherichia coli KTE169]
gi|431253314|gb|ELF46793.1| protein pmbA [Escherichia coli KTE6]
gi|431269359|gb|ELF60712.1| protein pmbA [Escherichia coli KTE17]
gi|431277546|gb|ELF68551.1| protein pmbA [Escherichia coli KTE18]
gi|431279093|gb|ELF70062.1| protein pmbA [Escherichia coli KTE45]
gi|431286988|gb|ELF77806.1| protein pmbA [Escherichia coli KTE23]
gi|431303758|gb|ELF92300.1| protein pmbA [Escherichia coli KTE46]
gi|431427908|gb|ELH09851.1| protein pmbA [Escherichia coli KTE165]
gi|431438252|gb|ELH19626.1| protein pmbA [Escherichia coli KTE194]
gi|431450262|gb|ELH30751.1| protein pmbA [Escherichia coli KTE173]
gi|431451071|gb|ELH31548.1| protein pmbA [Escherichia coli KTE175]
gi|431458727|gb|ELH39048.1| protein pmbA [Escherichia coli KTE183]
gi|431488206|gb|ELH67842.1| protein pmbA [Escherichia coli KTE207]
gi|431491342|gb|ELH70948.1| protein pmbA [Escherichia coli KTE215]
gi|431500482|gb|ELH79497.1| protein pmbA [Escherichia coli KTE211]
gi|431500674|gb|ELH79687.1| protein pmbA [Escherichia coli KTE217]
gi|431525095|gb|ELI01902.1| protein pmbA [Escherichia coli KTE104]
gi|431528169|gb|ELI04878.1| protein pmbA [Escherichia coli KTE106]
gi|431556856|gb|ELI30630.1| protein pmbA [Escherichia coli KTE113]
gi|431596397|gb|ELI66351.1| protein pmbA [Escherichia coli KTE133]
gi|431610641|gb|ELI79927.1| protein pmbA [Escherichia coli KTE139]
gi|431613925|gb|ELI83092.1| protein pmbA [Escherichia coli KTE145]
gi|431621693|gb|ELI90484.1| protein pmbA [Escherichia coli KTE148]
gi|431622723|gb|ELI91409.1| protein pmbA [Escherichia coli KTE150]
gi|431655504|gb|ELJ22536.1| protein pmbA [Escherichia coli KTE168]
gi|431700151|gb|ELJ65136.1| protein pmbA [Escherichia coli KTE88]
Length = 450
Score = 340 bits (872), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 267/423 (63%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPADVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R +VK+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIVKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|152978486|ref|YP_001344115.1| peptidase U62 modulator of DNA gyrase [Actinobacillus succinogenes
130Z]
gi|150840209|gb|ABR74180.1| peptidase U62 modulator of DNA gyrase [Actinobacillus succinogenes
130Z]
Length = 451
Score = 340 bits (872), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 171/444 (38%), Positives = 285/444 (64%), Gaps = 8/444 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E ++ + A K GA+ + + + +G SV R +++ +E NND + + +Y+
Sbjct: 15 EQELREAVSYAVEIATKAGAT-AEVAVTKVSGLSVSTRLREVENVEFNNDGALGISVYLG 73
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K GN+STSD ++++ + + +A IA++T+ D+ AGL + + + D LY P
Sbjct: 74 QQK----GNASTSDLSREAIKNAVESALAIAKYTSPDDCAGLAPKELMAFDAPDLDLYHP 129
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+ +D A +A + E+ A +++ IVN+ + Q + NS+G + Y S++ +
Sbjct: 130 SDVDVDAAAELALQAESAALDYDKRIVNSNGASFNSHQGVRVYGNSYGMLQSYLSSRYSV 189
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S + E++ D Y+ + +L+ P +G +AA++TIS LK +KI+T++CPV+F
Sbjct: 190 SCSVLGGADDELESDYEYTVSRKLDELESPGWVGRHAAEKTISHLKPQKIATQQCPVIFM 249
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L+ A ISG SLYRK++FL+D LG++I + ++ E PH++G S+ FD+E
Sbjct: 250 NDVATGLIGHLAAAISGGSLYRKNSFLLDKLGQRILPAWFRVSERPHLIGRLASTPFDSE 309
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+TQ R +++NG++Q Y L++YSAKK+GM+TTG++GG H+ ++ K S+ NL +L+
Sbjct: 310 GVRTQAREIIENGVLQSYLLTSYSAKKMGMQTTGHAGGIHNWLV---KPNSAGNLTALLR 366
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M+TGLLVT+LMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L M + IVA+
Sbjct: 367 QMDTGLLVTDLMGQGVNMVTGDYSRGASGFWVENGEIQYPVSEITIAGNLSEMLENIVAV 426
Query: 435 GSDVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GSIL+ENM I+G
Sbjct: 427 ADDIEHRSNIQTGSILLENMKISG 450
>gi|331650366|ref|ZP_08351438.1| protein PmbA [Escherichia coli M605]
gi|331040760|gb|EGI12918.1| protein PmbA [Escherichia coli M605]
Length = 450
Score = 340 bits (872), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 267/423 (63%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPADVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R +VK+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIVKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSTITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|293476537|ref|ZP_06664945.1| peptidase PmbA [Escherichia coli B088]
gi|331644984|ref|ZP_08346101.1| protein PmbA [Escherichia coli H736]
gi|386617145|ref|YP_006136811.1| hypothetical protein UMNK88_5181 [Escherichia coli UMNK88]
gi|387610109|ref|YP_006098965.1| putative modulator of DNA gyrase [Escherichia coli 042]
gi|417149321|ref|ZP_11989412.1| protein PmbA [Escherichia coli 1.2264]
gi|417642290|ref|ZP_12292411.1| modulator of DNA gyrase family protein [Escherichia coli TX1999]
gi|432468728|ref|ZP_19710796.1| protein pmbA [Escherichia coli KTE205]
gi|432702406|ref|ZP_19937539.1| protein pmbA [Escherichia coli KTE171]
gi|433003284|ref|ZP_20191785.1| protein pmbA [Escherichia coli KTE227]
gi|433075622|ref|ZP_20262245.1| protein pmbA [Escherichia coli KTE129]
gi|433122951|ref|ZP_20308595.1| protein pmbA [Escherichia coli KTE157]
gi|433156525|ref|ZP_20341440.1| protein pmbA [Escherichia coli KTE176]
gi|433186115|ref|ZP_20370336.1| protein pmbA [Escherichia coli KTE85]
gi|284924409|emb|CBG37533.1| putative modulator of DNA gyrase [Escherichia coli 042]
gi|291320990|gb|EFE60432.1| peptidase PmbA [Escherichia coli B088]
gi|331035959|gb|EGI08197.1| protein PmbA [Escherichia coli H736]
gi|332346314|gb|AEE59648.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|345389098|gb|EGX18905.1| modulator of DNA gyrase family protein [Escherichia coli TX1999]
gi|386161542|gb|EIH23345.1| protein PmbA [Escherichia coli 1.2264]
gi|430988767|gb|ELD05237.1| protein pmbA [Escherichia coli KTE205]
gi|431248280|gb|ELF42483.1| protein pmbA [Escherichia coli KTE171]
gi|431519876|gb|ELH97306.1| protein pmbA [Escherichia coli KTE227]
gi|431580332|gb|ELI52893.1| protein pmbA [Escherichia coli KTE129]
gi|431637397|gb|ELJ05494.1| protein pmbA [Escherichia coli KTE157]
gi|431668633|gb|ELJ35149.1| protein pmbA [Escherichia coli KTE176]
gi|431699935|gb|ELJ64924.1| protein pmbA [Escherichia coli KTE85]
Length = 450
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AGL D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPCAGLADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|422806967|ref|ZP_16855398.1| pmbA protein [Escherichia fergusonii B253]
gi|324112142|gb|EGC06120.1| pmbA protein [Escherichia fergusonii B253]
Length = 446
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/452 (38%), Positives = 281/452 (62%), Gaps = 12/452 (2%)
Query: 12 IYSKSEFQQ-LAQDMLNYAKKIGASHS---SIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
+ S+ E Q+ + +D ++ A ++ + S + ++ G SV R G+++ +E N+D +
Sbjct: 3 VISQVEAQRKILEDAVSTALELASGKSDGAEVAVSKTTGISVSTRYGEVENVEFNSDGAL 62
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
+ +Y Q+ K G++S++D +++ T+ AA +IAR+T+ D AG+ D+ L +
Sbjct: 63 GITVYHQNRK----GSASSTDLSPQAIARTVQAALDIARYTSPDPCAGVADKELLAFDAP 118
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ P +S D+A +A R E A + I N E + + NSHG + GY
Sbjct: 119 DLDLFHPAEVSPDEAIELAARAEQAALQADKRITNTEGGSFNSHYGVKVFGNSHGMLQGY 178
Query: 188 PFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTR 247
++H +S IA + +M+RD Y+ L PE +G A+RT+SRL +K+ST
Sbjct: 179 CSTRHSLSSCVIAEENGDMERDYAYTIGRAMSDLQTPEWVGADCARRTLSRLSPRKLSTM 238
Query: 248 KCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFG 307
K PV+F +A L I+G S+YRKSTFL+DSLGK+I + I E PH+L
Sbjct: 239 KAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFLLDSLGKQILPDWLTIEEHPHLLKGLA 298
Query: 308 SSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD 367
S+ FD+EGV+T++R ++K+GI+ + L++YSA+KLG+K+TG++GG H+ I
Sbjct: 299 STPFDSEGVRTERRDIIKDGILTQWLLTSYSARKLGLKSTGHAGGIHNWRIAGQGL---- 354
Query: 368 NLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNM 427
+ ++MLK+M TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L++M
Sbjct: 355 SFEQMLKEMGTGLVVTELMGQGVSAITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDM 414
Query: 428 FKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++ IV +G+D+ TR++ GS+L+ M IAG+
Sbjct: 415 WRNIVTVGNDIETRSNIQCGSVLLPEMKIAGQ 446
>gi|410631058|ref|ZP_11341741.1| PmbA protein [Glaciecola arctica BSs20135]
gi|410149425|dbj|GAC18608.1| PmbA protein [Glaciecola arctica BSs20135]
Length = 441
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 187/444 (42%), Positives = 269/444 (60%), Gaps = 8/444 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+E Q + +D+L AK GA+ + ++ G +V R +++ +E ND + + +Y
Sbjct: 6 AEIQSIVEDVLKLAKDKGATQAEASMSKVEGIAVSSRLKEVETVEFTNDGGLGITVY--Q 63
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
GKK G++ST+D ++L T+ A IA+ T+ D+ +GL ++ + + D L+ P
Sbjct: 64 GKKK--GSASTADLSPQALTLTVEKAIEIAKHTSDDDCSGLAEKELMAFDYPDLDLFHPT 121
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L + A E A + + I N++ + NSHGF++GY S++ +S
Sbjct: 122 ELDTEYAIQQVIAAETSALDVDPRITNSDGASYNANLGTKVYGNSHGFIAGYNSSRYSMS 181
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD Y+ + KL PE +G AA+ T+ RL A+K+ T K PVLF+
Sbjct: 182 CVVIGEQNGDMQRDYSYTVGREAGKLTSPEQLGREAAQFTLGRLGARKVKTCKVPVLFDR 241
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L F ISG SLYRKS+FL+D LG+++ + + I+E PHIL SS FD+EG
Sbjct: 242 EIASGLFGHFINAISGGSLYRKSSFLLDKLGQQVLPNWLNIVERPHILRGLASSPFDHEG 301
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
VKTQ VV NG++ Y L++YSA+KL M+TTG++GG H+ I T SD KEMLKK
Sbjct: 302 VKTQDMDVVSNGLLNHYLLTSYSARKLKMQTTGHAGGIHNWFI--QHTGESD--KEMLKK 357
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
+ TGLLVTELMG G+N +TGDYS+GA G+W+ENG IQY V EITI+G L +M IVAIG
Sbjct: 358 LGTGLLVTELMGQGVNIVTGDYSRGAAGFWVENGIIQYPVHEITIAGNLADMLLNIVAIG 417
Query: 436 SDVLTRNSNTSGSILIENMIIAGK 459
+ TR S +GSILIE M IAG+
Sbjct: 418 AAQETRGSIQTGSILIEQMQIAGE 441
>gi|398862582|ref|ZP_10618174.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM78]
gi|398250121|gb|EJN35469.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM78]
Length = 448
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/441 (40%), Positives = 270/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEAKRQGASACEVAVSLEQGLSTTVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D + + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAKHTSEDEASGLADAALMARDVQDFDLFHQWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
S + A A CE AF +S I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 SPEQAIEQALACEAAAFAADSRIKNTDGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGNLLADPVSIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG SLYRKS+FL +LG+K+F + I E PH++ + GS++FD +G+
Sbjct: 251 AGGLFGSFLSAISGGSLYRKSSFLEGTLGQKLFPEWLTIDERPHLMRALGSAAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TYS +KLGM +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVEKGELVSYILGTYSGRKLGMPSTANAGGVHNLFV----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGQGLNMVTGDYSRGAAGYWVENGEIQFAVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|419173241|ref|ZP_13717106.1| protein pmbA [Escherichia coli DEC7A]
gi|419183815|ref|ZP_13727395.1| modulator of DNA gyrase family protein [Escherichia coli DEC7C]
gi|419189415|ref|ZP_13732911.1| modulator of DNA gyrase family protein [Escherichia coli DEC7D]
gi|419194546|ref|ZP_13737979.1| protein pmbA [Escherichia coli DEC7E]
gi|420388650|ref|ZP_14887973.1| protein pmbA [Escherichia coli EPECa12]
gi|378008197|gb|EHV71157.1| protein pmbA [Escherichia coli DEC7A]
gi|378020585|gb|EHV83331.1| modulator of DNA gyrase family protein [Escherichia coli DEC7C]
gi|378022760|gb|EHV85445.1| modulator of DNA gyrase family protein [Escherichia coli DEC7D]
gi|378033414|gb|EHV95993.1| protein pmbA [Escherichia coli DEC7E]
gi|391300295|gb|EIQ58217.1| protein pmbA [Escherichia coli EPECa12]
Length = 446
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AGL D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGLADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|417127683|ref|ZP_11975123.1| protein PmbA [Escherichia coli 97.0246]
gi|386144149|gb|EIG90616.1| protein PmbA [Escherichia coli 97.0246]
Length = 450
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AGL D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPCAGLADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|385786029|ref|YP_005817138.1| peptidase PmbA [Erwinia sp. Ejp617]
gi|310765301|gb|ADP10251.1| peptidase PmbA [Erwinia sp. Ejp617]
Length = 446
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 176/455 (38%), Positives = 273/455 (60%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K S+ + +Q L AK + + + + G SV R G ++ +E N+D
Sbjct: 1 MKLLSQVAEQRKTLEQAVATALELAKA-SSDGAEVAVTKTTGISVSTRYGSVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q+ K G++S++D ++ T+ AA +IAR+T+ D +AG+ D + L
Sbjct: 60 GALGITVYHQNRK----GSASSTDLSHDAIQRTVQAALDIARYTSPDPYAGVADPDLLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
D L+ P + D A +A R E A + I N E + + NSHG +
Sbjct: 116 AAPDLDLFHPSEIDADRAIELAARAEQAALKSDKRITNTEGGSFNSHVGIKVFGNSHGMI 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
GY S+H +S IA + +M+RD Y+ + L PE +G A+RT+SRL +K+
Sbjct: 176 QGYCSSRHSLSSCVIAEENGDMERDYAYTIGRAMEDLKSPEYVGEECARRTLSRLSPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
ST K PV+F A +A L ISG S+YRKSTFL+DSLG++I + I E PH+L
Sbjct: 236 STMKAPVMFAAEVATGLFGHLVGAISGGSVYRKSTFLLDSLGQQILPEWLTIEEHPHLLK 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+TQ+R ++++G++Q + L++YSA+KLG+K+TG++GG H+ I
Sbjct: 296 GLASTPFDSEGVRTQRRDIIQDGVLQNWLLTSYSARKLGLKSTGHAGGIHNWRIAGQ--- 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ +MLK++ TGLLVTELMG G++ ITGDYS+GA G+W+ENG IQY V EITI+G L
Sbjct: 353 -GHSFDDMLKQLGTGLLVTELMGQGVSGITGDYSRGASGFWVENGVIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M++ +V++GSD TR++ GS+L+ M IAG+
Sbjct: 412 KDMWRNMVSVGSDTETRSNIQCGSVLLPEMKIAGQ 446
>gi|386390487|ref|ZP_10075276.1| protein PmbA [Haemophilus paraphrohaemolyticus HK411]
gi|385693212|gb|EIG23867.1| protein PmbA [Haemophilus paraphrohaemolyticus HK411]
Length = 449
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/445 (39%), Positives = 280/445 (62%), Gaps = 8/445 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + LN+AKK GA + + + G SV R +++ IE NND ++ + +Y+
Sbjct: 13 EQELRQAVEFALNFAKKAGA-EAEVGVTKVAGLSVSSRLEQVENIEFNNDGSLGISVYL- 70
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
GK+ GN+STSD +S+ + +A IA++T+ D AGL D+ + + D +LY
Sbjct: 71 -GKRK--GNASTSDLQPQSIQRAVESALAIAKYTSEDECAGLADKELMAFDAPDLELYHQ 127
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
LS+D A +A EN A N + IVN+E + + N+HG + S++ +
Sbjct: 128 ADLSVDQALALAIEAENAALNADEQIVNSEGATFNSHSGVRMYGNTHGMLQSNLSSRYSL 187
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S IA ++++RD Y+ + + KL P+ +G AA + + RL +KI T + PV++
Sbjct: 188 SCSVIAAHDEQLERDYEYTISREFDKLQAPQWVGQQAAFKAVDRLNPQKIKTCEVPVVYY 247
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L+ A ISG +LYRKS+FL+D LGK++ +I E PH+L S++FD+E
Sbjct: 248 NDVATGLIGHLAGAISGGALYRKSSFLLDHLGKQVLPDWFEISERPHLLRQLASTAFDSE 307
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+TQ R ++++G++Q Y +++YSA+K+G K+TG++GG H+ ++ N+T D L LK
Sbjct: 308 GVRTQNREIIRDGVLQTYLMTSYSARKMGFKSTGHAGGIHNWLVKPNRTGGLDTL---LK 364
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M+TGLL+TE +G IN +TG+YS+GA G+W+E G+IQY V EIT++G+LQ MF QI+A+
Sbjct: 365 EMDTGLLLTEFLGSAINPVTGEYSRGAAGFWVEKGEIQYPVAEITVAGQLQEMFNQIIAV 424
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
DV R++ +GSILIE M I+G+
Sbjct: 425 ADDVEHRSNIQTGSILIEKMKISGE 449
>gi|331660815|ref|ZP_08361747.1| protein PmbA [Escherichia coli TA206]
gi|417280128|ref|ZP_12067428.1| protein PmbA [Escherichia coli 3003]
gi|417287889|ref|ZP_12075175.1| protein PmbA [Escherichia coli TW07793]
gi|419703123|ref|ZP_14230702.1| peptidase PmbA [Escherichia coli SCI-07]
gi|425280714|ref|ZP_18671922.1| pmbA protease involved in microcin B17 maturation and sensitivity
to the DNA gyrase inhibitor LetD [Escherichia coli
ARS4.2123]
gi|331051857|gb|EGI23896.1| protein PmbA [Escherichia coli TA206]
gi|380345747|gb|EIA34056.1| peptidase PmbA [Escherichia coli SCI-07]
gi|386244457|gb|EII86187.1| protein PmbA [Escherichia coli 3003]
gi|386248674|gb|EII94846.1| protein PmbA [Escherichia coli TW07793]
gi|408196779|gb|EKI22058.1| pmbA protease involved in microcin B17 maturation and sensitivity
to the DNA gyrase inhibitor LetD [Escherichia coli
ARS4.2123]
Length = 446
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 267/423 (63%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPADVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R +VK+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIVKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|417664908|ref|ZP_12314487.1| tldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Escherichia coli AA86]
gi|330908582|gb|EGH37101.1| tldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Escherichia coli AA86]
Length = 446
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 267/423 (63%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPADVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R +VK+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIVKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSTITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|425303189|ref|ZP_18693061.1| pmbA protease involved in microcin B17 maturation and sensitivity
to the DNA gyrase inhibitor LetD [Escherichia coli
07798]
gi|408209629|gb|EKI34218.1| pmbA protease involved in microcin B17 maturation and sensitivity
to the DNA gyrase inhibitor LetD [Escherichia coli
07798]
Length = 446
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 267/423 (63%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPTDVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R +VK+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIVKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|82779296|ref|YP_405645.1| peptidase PmbA [Shigella dysenteriae Sd197]
gi|81243444|gb|ABB64154.1| PmbA [Shigella dysenteriae Sd197]
Length = 450
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R V+K+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDVIKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|417118313|ref|ZP_11968889.1| protein PmbA [Escherichia coli 1.2741]
gi|422331210|ref|ZP_16412226.1| protein pmbA [Escherichia coli 4_1_47FAA]
gi|432395032|ref|ZP_19637840.1| protein pmbA [Escherichia coli KTE21]
gi|432546093|ref|ZP_19782909.1| protein pmbA [Escherichia coli KTE236]
gi|432551574|ref|ZP_19788315.1| protein pmbA [Escherichia coli KTE237]
gi|432624696|ref|ZP_19860700.1| protein pmbA [Escherichia coli KTE76]
gi|432716865|ref|ZP_19951873.1| protein pmbA [Escherichia coli KTE9]
gi|432768612|ref|ZP_20002996.1| protein pmbA [Escherichia coli KTE50]
gi|432791013|ref|ZP_20025130.1| protein pmbA [Escherichia coli KTE78]
gi|432797002|ref|ZP_20031032.1| protein pmbA [Escherichia coli KTE79]
gi|432818063|ref|ZP_20051790.1| protein pmbA [Escherichia coli KTE115]
gi|432958251|ref|ZP_20149393.1| protein pmbA [Escherichia coli KTE202]
gi|433065709|ref|ZP_20252601.1| protein pmbA [Escherichia coli KTE125]
gi|373247847|gb|EHP67284.1| protein pmbA [Escherichia coli 4_1_47FAA]
gi|386138737|gb|EIG79896.1| protein PmbA [Escherichia coli 1.2741]
gi|430912386|gb|ELC33568.1| protein pmbA [Escherichia coli KTE21]
gi|431069107|gb|ELD77443.1| protein pmbA [Escherichia coli KTE236]
gi|431074574|gb|ELD82123.1| protein pmbA [Escherichia coli KTE237]
gi|431153987|gb|ELE54880.1| protein pmbA [Escherichia coli KTE76]
gi|431268498|gb|ELF59968.1| protein pmbA [Escherichia coli KTE9]
gi|431320943|gb|ELG08569.1| protein pmbA [Escherichia coli KTE50]
gi|431343553|gb|ELG30511.1| protein pmbA [Escherichia coli KTE78]
gi|431346987|gb|ELG33881.1| protein pmbA [Escherichia coli KTE79]
gi|431359052|gb|ELG45697.1| protein pmbA [Escherichia coli KTE115]
gi|431485054|gb|ELH64725.1| protein pmbA [Escherichia coli KTE202]
gi|431576937|gb|ELI49598.1| protein pmbA [Escherichia coli KTE125]
Length = 450
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R +VK+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIVKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|398858584|ref|ZP_10614273.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM79]
gi|398239043|gb|EJN24762.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM79]
Length = 448
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/441 (40%), Positives = 271/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEAKRQGASACEVAVSLEQGLSTTVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D + + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAKHTSEDEASGLADAALMAKDLQDFDLFHQWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF +S I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEQALACEAAAFAADSRIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L PE IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGNLLASPESIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG SLYRKS+FL +LG+K+F + I E PH++ + GSS+FD +G+
Sbjct: 251 AGGLFGSFLSAISGGSLYRKSSFLEGTLGQKLFPEWLTIDERPHLMRALGSSAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TYS +KLGM +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVEKGELVSYILGTYSGRKLGMPSTANAGGVHNLFV----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MFKQI+A+G+D
Sbjct: 367 RGLLVTELMGQGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFKQIIAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|419011415|ref|ZP_13558785.1| protein pmbA [Escherichia coli DEC1D]
gi|377864949|gb|EHU29741.1| protein pmbA [Escherichia coli DEC1D]
Length = 446
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVAIGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|432600371|ref|ZP_19836627.1| protein pmbA [Escherichia coli KTE66]
gi|431144410|gb|ELE46104.1| protein pmbA [Escherichia coli KTE66]
Length = 450
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQV 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|82546518|ref|YP_410465.1| peptidase PmbA [Shigella boydii Sb227]
gi|81247929|gb|ABB68637.1| PmbA [Shigella boydii Sb227]
Length = 450
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 AMSDLQTPEWVGVDCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|432374813|ref|ZP_19617837.1| protein pmbA [Escherichia coli KTE11]
gi|430892750|gb|ELC15239.1| protein pmbA [Escherichia coli KTE11]
Length = 450
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 267/423 (63%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALKA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|416900968|ref|ZP_11930100.1| modulator of DNA gyrase family protein [Escherichia coli STEC_7v]
gi|422801954|ref|ZP_16850449.1| PmbA protein [Escherichia coli M863]
gi|323965625|gb|EGB61079.1| PmbA protein [Escherichia coli M863]
gi|327250179|gb|EGE61898.1| modulator of DNA gyrase family protein [Escherichia coli STEC_7v]
Length = 446
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R +VK+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIVKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|309784148|ref|ZP_07678788.1| modulator of DNA gyrase family protein [Shigella dysenteriae 1617]
gi|308928011|gb|EFP73478.1| modulator of DNA gyrase family protein [Shigella dysenteriae 1617]
Length = 446
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R V+K+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDVIKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|359780539|ref|ZP_09283765.1| peptidase U62, modulator of DNA gyrase [Pseudomonas psychrotolerans
L19]
gi|359371851|gb|EHK72416.1| peptidase U62, modulator of DNA gyrase [Pseudomonas psychrotolerans
L19]
Length = 449
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 179/443 (40%), Positives = 273/443 (61%), Gaps = 9/443 (2%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E ++ + +L A++ GAS + + G S VRKG+++ +E N D+ + +Y
Sbjct: 14 ELREQVEAILAEARRQGASAGEVAVSVDQGLSTSVRKGEVETVEFNRDQGFGITLYAGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL-DFKLYTPW 135
K G++STS +++ +T+ AA IA+ T+ D AGL D + L D LY PW
Sbjct: 74 K----GSASTSATGPEAIRETVAAALAIAKHTSEDPCAGLADAELMARGELPDLDLYHPW 129
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
++ + A A CE A+ +S I N + T + T QS + NSHGF+ GY ++H +S
Sbjct: 130 DITPEQAIEQALACEAAAYAADSRIGNADGTTLNTHQSCRVYGNSHGFVGGYASTRHSLS 189
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
IA G+ MQRD +Y N +L E IG AA+R +SRL A+ + T K PVLF
Sbjct: 190 CVMIAGSGEAMQRDYYYDVNRIGHELMSAEQIGRRAAERAVSRLGARPVPTAKVPVLFSP 249
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L F ISG +LYRKS+FL +LG+++F + + E PH+ + GS++FD EG
Sbjct: 250 EMAAGLFGTFLAAISGGNLYRKSSFLEGALGQQVFPDWLTLDERPHLPRALGSAAFDGEG 309
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
+ T + V+NG + Y L +YSA+KLG+++T N+GG H+L + + + + E++++
Sbjct: 310 LATYAKPFVENGQLVSYVLGSYSARKLGLQSTANAGGVHNLHV----SHGTADQAELIRQ 365
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TG LVTE+MG G N +TGDYS+GA G+WIENG+IQ+ V+E+TI+G+L +MF+QI+A+G
Sbjct: 366 MGTGFLVTEMMGQGTNLVTGDYSRGAGGFWIENGEIQFPVQEVTIAGRLGDMFRQILAVG 425
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
SDV R S +GS+LI+ M +AG
Sbjct: 426 SDVERRGSLRTGSVLIDGMTLAG 448
>gi|416298534|ref|ZP_11652026.1| peptidase PmbA [Shigella flexneri CDC 796-83]
gi|417685122|ref|ZP_12334452.1| modulator of DNA gyrase family protein [Shigella boydii 3594-74]
gi|420328479|ref|ZP_14830209.1| protein pmbA [Shigella flexneri CCH060]
gi|420356056|ref|ZP_14857103.1| protein pmbA [Shigella boydii 4444-74]
gi|421685563|ref|ZP_16125336.1| modulator of DNA gyrase family protein [Shigella flexneri 1485-80]
gi|320185329|gb|EFW60101.1| peptidase PmbA [Shigella flexneri CDC 796-83]
gi|332087127|gb|EGI92261.1| modulator of DNA gyrase family protein [Shigella boydii 3594-74]
gi|391243956|gb|EIQ03244.1| protein pmbA [Shigella flexneri CCH060]
gi|391269791|gb|EIQ28690.1| protein pmbA [Shigella boydii 4444-74]
gi|404334658|gb|EJZ61137.1| modulator of DNA gyrase family protein [Shigella flexneri 1485-80]
Length = 446
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 AMSDLQTPEWVGVDCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|74314712|ref|YP_313131.1| peptidase PmbA [Shigella sonnei Ss046]
gi|73858189|gb|AAZ90896.1| PmbBA [Shigella sonnei Ss046]
Length = 450
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AGL D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPCAGLADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLLPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|383181565|ref|YP_005459570.1| peptidase PmbA [Shigella sonnei 53G]
gi|414579114|ref|ZP_11436271.1| protein pmbA [Shigella sonnei 3233-85]
gi|415848658|ref|ZP_11526293.1| modulator of DNA gyrase family protein [Shigella sonnei 53G]
gi|418271154|ref|ZP_12888634.1| modulator of DNA gyrase family protein [Shigella sonnei str.
Moseley]
gi|420356336|ref|ZP_14857363.1| protein pmbA [Shigella sonnei 3226-85]
gi|420366290|ref|ZP_14867141.1| modulator of DNA gyrase family protein [Shigella sonnei 4822-66]
gi|323166722|gb|EFZ52480.1| modulator of DNA gyrase family protein [Shigella sonnei 53G]
gi|391279681|gb|EIQ38367.1| protein pmbA [Shigella sonnei 3233-85]
gi|391290444|gb|EIQ48903.1| protein pmbA [Shigella sonnei 3226-85]
gi|391291179|gb|EIQ49595.1| modulator of DNA gyrase family protein [Shigella sonnei 4822-66]
gi|397893938|gb|EJL10392.1| modulator of DNA gyrase family protein [Shigella sonnei str.
Moseley]
Length = 446
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AGL D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGLADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLLPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|366160892|ref|ZP_09460754.1| peptidase PmbA [Escherichia sp. TW09308]
gi|433326222|ref|ZP_20403136.1| peptidase PmbA [Escherichia coli J96]
gi|432345696|gb|ELL40196.1| peptidase PmbA [Escherichia coli J96]
Length = 446
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 267/423 (63%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALKA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|422828537|ref|ZP_16876708.1| pmbA [Escherichia coli B093]
gi|371612846|gb|EHO01351.1| pmbA [Escherichia coli B093]
Length = 450
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLSEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|452749651|ref|ZP_21949411.1| PmbA protein [Pseudomonas stutzeri NF13]
gi|452006583|gb|EMD98855.1| PmbA protein [Pseudomonas stutzeri NF13]
Length = 448
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 176/442 (39%), Positives = 269/442 (60%), Gaps = 8/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++ + ++ A++ GAS S + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LREKVERIIEEARRQGASASEVSVSMEQGLSTTVRQREVETVEFNRDQGFGITLYVGQSK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G +ST+ ++ +T+ AA IAR + D FAGL D + + LY PW +
Sbjct: 75 ----GTASTTGSGDDAIRETVAAALAIARHASEDEFAGLADATLMARELPELDLYHPWAI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF F+ I N + T + T Q NS+GF+ GY S+H +S
Sbjct: 131 TPEQAIEQALSCEGAAFAFDQRIRNADGTTLNTHQGCRAYGNSNGFIGGYCSSRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD +Y N + L P+ IG AA+R + RL A+ + T + PVLF L
Sbjct: 191 MIAESEGQMQRDYFYDVNRIGEALLDPQTIGQRAAERAVRRLGARPVPTCEVPVLFAPEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L + F ISG +LYRK+++L D+LG+ +F + + E PHI + GS+S+D +G+
Sbjct: 251 ATGLFSHFIAAISGGNLYRKASYLEDALGQTLFPEWLSLDERPHIPLALGSASYDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y LSTYS +KLGM +T N+GG H+L + + ++ ++++M
Sbjct: 311 TYAKPFVENGRLLSYVLSTYSGRKLGMPSTANAGGVHNLFV----SHGDEDQAALIRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA GYWIENG+IQ+ V+E+TI+G L++MF+QIVA+G D
Sbjct: 367 RGLLVTELMGQGLNLVTGDYSRGAGGYWIENGEIQFPVQEVTIAGNLRDMFRQIVAVGCD 426
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
V TR + +GS+LIE M++AGK
Sbjct: 427 VETRGNVRTGSVLIERMMVAGK 448
>gi|404373163|ref|ZP_10978435.1| protein pmbA [Escherichia sp. 1_1_43]
gi|226840361|gb|EEH72363.1| protein pmbA [Escherichia sp. 1_1_43]
Length = 450
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPADVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLSEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|416067601|ref|ZP_11582345.1| PmbA protein [Aggregatibacter actinomycetemcomitans serotype f str.
D18P1]
gi|348001978|gb|EGY42701.1| PmbA protein [Aggregatibacter actinomycetemcomitans serotype f str.
D18P1]
Length = 453
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 179/461 (38%), Positives = 287/461 (62%), Gaps = 12/461 (2%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDM---LNYAKKIGASHSSIEFNEGNGFSVFVRKGKID 57
M+Q +S + + E QQL + + A+K GA+ + + + G SV R +I+
Sbjct: 1 MQQKTLEKSTALLRQQE-QQLRDAVSLAIEIAQKAGAT-AEVGVTKSGGLSVSTRLREIE 58
Query: 58 VIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLP 117
+E NND + + +Y+ K GN+STSD ++ T+ AA IA++T+ D+ AGL
Sbjct: 59 NVEFNNDGALGISVYLGQQK----GNASTSDLTPDAIKSTVEAALAIAKYTSPDDCAGLA 114
Query: 118 DENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLL 177
D++ + + D LY + +D A +A E A ++ IVN+E +
Sbjct: 115 DKDLMAFDAPDLALYHAAEIEVDHAMQLALETEKAALEHDARIVNSEGASFNAHTGVRVY 174
Query: 178 ANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTIS 237
NSHG + Y S++ +S S IA +++RD Y+ D +L QP+ +G +AA++ I+
Sbjct: 175 GNSHGMLQSYLSSRYSLSCSVIAEHQTQLERDYEYTVARDMTQLAQPKWVGEHAAQKAIA 234
Query: 238 RLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQII 297
RL+ +K++T++ PV+F +A L++ A ISG SLYRK++FL+D L K++ +I+
Sbjct: 235 RLQPQKLATQQAPVIFLNDVATGLISHLATAISGGSLYRKASFLLDHLDKQVLPDWFEIV 294
Query: 298 EDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLI 357
E PH+LG S+ FD+EGVKTQ +++NGI+Q Y L++YS +KLGM++ G++GG H+ +
Sbjct: 295 ERPHLLGQLASTPFDSEGVKTQDMDIIRNGILQTYLLTSYSGRKLGMQSNGHAGGIHNWL 354
Query: 358 IISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEE 417
+ K SS L +L++MN GLLVTE+MG G+N ++GDYS+GA G+W+ENG+IQY V E
Sbjct: 355 V---KANSSGKLTALLRQMNRGLLVTEVMGQGVNPVSGDYSRGAAGFWVENGEIQYPVAE 411
Query: 418 ITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
ITI+G+L + + IVA+G D+ R++ +GSIL+ENM I+G
Sbjct: 412 ITIAGQLPEILRNIVAVGDDIEHRSNIQTGSILLENMKISG 452
>gi|52424737|ref|YP_087874.1| TldD protein [Mannheimia succiniciproducens MBEL55E]
gi|52306789|gb|AAU37289.1| TldD protein [Mannheimia succiniciproducens MBEL55E]
Length = 451
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/444 (38%), Positives = 279/444 (62%), Gaps = 12/444 (2%)
Query: 19 QQLAQDMLNYA----KKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+Q +D ++YA +K GAS + + + NG SV R +++ +E NND + + +Y+
Sbjct: 15 EQALRDAVSYAVEIAQKAGAS-AEVAVTKVNGLSVSTRLKEVENVEFNNDGALGISVYLG 73
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K GN+STSD K ++ + + AA IA++T+ D AGL D+ + LY P
Sbjct: 74 QQK----GNASTSDLSKDAIKNAVEAALAIAKYTSPDECAGLADKELMAFEAPSLALYNP 129
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+ +D A +A + E A N++ IVN+ + + NS+G + Y S++ I
Sbjct: 130 AEVDVDQAIELALQAETAALNYDKRIVNSNGASFNSHNGVRVYGNSYGMLQSYLSSRYSI 189
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S ++ E++ D Y+ + D L+ P +G AAK+ ++RL+ +KI+T++ PV+F
Sbjct: 190 SCSVLSGIDDELENDYEYTVSRDLNALESPVWVGENAAKKAVARLQPRKITTQEAPVIFL 249
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L+ A ISG SLYRK++FL+D LG++I I E PH+ G S+ FD+E
Sbjct: 250 NDVATGLIGSLAGAISGGSLYRKASFLLDHLGRQILPDWFHISERPHLTGRLASTPFDSE 309
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GVKTQ R +V+ GI++ Y L++YS +KLGM++TG++GG H+ ++ N ++ +L +L+
Sbjct: 310 GVKTQSREIVEQGILRTYLLTSYSGRKLGMQSTGHAGGIHNWLVRPN---ANGDLDSLLR 366
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M GLLVT+LMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+L++M + IVA+
Sbjct: 367 QMGRGLLVTDLMGQGVNMVTGDYSRGAAGFWVENGEIQYPVAEITIAGRLKDMLRDIVAV 426
Query: 435 GSDVLTRNSNTSGSILIENMIIAG 458
G D+ R++ +GSIL+E+M I+G
Sbjct: 427 GDDIEQRSNIQTGSILLESMKISG 450
>gi|423198551|ref|ZP_17185134.1| hypothetical protein HMPREF1171_03166 [Aeromonas hydrophila SSU]
gi|404630270|gb|EKB26971.1| hypothetical protein HMPREF1171_03166 [Aeromonas hydrophila SSU]
Length = 447
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 182/443 (41%), Positives = 267/443 (60%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ + + + L+ AK +GAS + + ++ G SV R +++ IE N D + + +Y +D
Sbjct: 12 AHLEAVVAEALDIAKGLGASLAEVSISKQTGLSVNTRGCELESIEFNKDGALGIAVY-RD 70
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
G K G+SST+D ++ + AA IAR T+ D AGL D + L N D +L P
Sbjct: 71 GCK---GSSSTTDLSPSAIRAAVEAAMEIARHTSPDECAGLADADLLAWNAPDLQLCHPV 127
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L +A CE A ++ I +++ G ++ + NSHGF+ GY S++ +S
Sbjct: 128 ALDPQYGIELATECERLALGRDARIKHSDGAGFSSHLGIKVYGNSHGFVKGYAASRNSLS 187
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD YSS+ + L P+ I A +RT+SRL A+KI+TR PVLF
Sbjct: 188 CVLIGEQDGDMQRDYGYSSSRTLEGLWSPQRIADEAVERTVSRLGARKIATRHAPVLFHP 247
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
A L ISG +LYRKS+FL+D LGK+I + I E PH+LG S+ FD EG
Sbjct: 248 DTAAGLWGHLVMAISGGNLYRKSSFLLDKLGKQILPEWLTIQEFPHLLGGLASTPFDGEG 307
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T+ +V+NG + + L++YSA+KLG+ +TG++GG H+ + S + + MLK+
Sbjct: 308 VQTRDMDIVRNGELMSWLLTSYSARKLGLTSTGHAGGIHNWQVSS----TGQDFNGMLKE 363
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGLLVTELMG G+N + GDYS+GA G+W+ENG+I Y VEEITI+G L MF IVA+G
Sbjct: 364 MGTGLLVTELMGQGVNIVNGDYSRGAAGFWVENGEIAYPVEEITIAGNLAEMFSHIVAVG 423
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
SD R+S +GS+L+ENM +AG
Sbjct: 424 SDEDERSSLKTGSVLVENMKLAG 446
>gi|15804825|ref|NP_290866.1| peptidase PmbA [Escherichia coli O157:H7 str. EDL933]
gi|15834466|ref|NP_313239.1| peptidase PmbA [Escherichia coli O157:H7 str. Sakai]
gi|16132057|ref|NP_418656.1| predicted peptidase required for the maturation and secretion of
the antibiotic peptide MccB17 [Escherichia coli str.
K-12 substr. MG1655]
gi|168760484|ref|ZP_02785491.1| protein PmbA [Escherichia coli O157:H7 str. EC4501]
gi|168774048|ref|ZP_02799055.1| protein PmbA [Escherichia coli O157:H7 str. EC4196]
gi|168784879|ref|ZP_02809886.1| protein PmbA [Escherichia coli O157:H7 str. EC869]
gi|168797809|ref|ZP_02822816.1| protein PmbA [Escherichia coli O157:H7 str. EC508]
gi|170083677|ref|YP_001732997.1| peptidase PmbA [Escherichia coli str. K-12 substr. DH10B]
gi|189010551|ref|ZP_02807763.2| protein PmbA [Escherichia coli O157:H7 str. EC4076]
gi|208813458|ref|ZP_03254787.1| protein PmbA [Escherichia coli O157:H7 str. EC4045]
gi|208820692|ref|ZP_03261012.1| protein PmbA [Escherichia coli O157:H7 str. EC4042]
gi|218556785|ref|YP_002389699.1| peptidase PmbA [Escherichia coli IAI1]
gi|218561395|ref|YP_002394308.1| peptidase PmbA [Escherichia coli S88]
gi|218697985|ref|YP_002405652.1| peptidase PmbA [Escherichia coli 55989]
gi|218702938|ref|YP_002410567.1| peptidase PmbA [Escherichia coli IAI39]
gi|218707844|ref|YP_002415363.1| peptidase PmbA [Escherichia coli UMN026]
gi|238903339|ref|YP_002929135.1| peptidase PmbA [Escherichia coli BW2952]
gi|254796254|ref|YP_003081091.1| peptidase PmbA [Escherichia coli O157:H7 str. TW14359]
gi|260858387|ref|YP_003232278.1| peptidase PmbA [Escherichia coli O26:H11 str. 11368]
gi|260870990|ref|YP_003237392.1| putative peptidase [Escherichia coli O111:H- str. 11128]
gi|261225355|ref|ZP_05939636.1| peptidase PmbA [Escherichia coli O157:H7 str. FRIK2000]
gi|261255392|ref|ZP_05947925.1| peptidase PmbA [Escherichia coli O157:H7 str. FRIK966]
gi|291285648|ref|YP_003502466.1| peptide maturation protein [Escherichia coli O55:H7 str. CB9615]
gi|293417737|ref|ZP_06660359.1| peptidase PmbA [Escherichia coli B185]
gi|300818542|ref|ZP_07098751.1| TldD/PmbA family protein [Escherichia coli MS 107-1]
gi|300899375|ref|ZP_07117633.1| TldD/PmbA family protein [Escherichia coli MS 198-1]
gi|300906080|ref|ZP_07123800.1| TldD/PmbA family protein [Escherichia coli MS 84-1]
gi|300922865|ref|ZP_07138948.1| TldD/PmbA family protein [Escherichia coli MS 182-1]
gi|300928058|ref|ZP_07143608.1| TldD/PmbA family protein [Escherichia coli MS 187-1]
gi|301302663|ref|ZP_07208793.1| TldD/PmbA family protein [Escherichia coli MS 124-1]
gi|301329266|ref|ZP_07222243.1| TldD/PmbA family protein [Escherichia coli MS 78-1]
gi|307312989|ref|ZP_07592617.1| peptidase U62 modulator of DNA gyrase [Escherichia coli W]
gi|309792873|ref|ZP_07687301.1| TldD/PmbA family protein [Escherichia coli MS 145-7]
gi|312965916|ref|ZP_07780142.1| modulator of DNA gyrase family protein [Escherichia coli 2362-75]
gi|331656070|ref|ZP_08357058.1| protein PmbA [Escherichia coli M718]
gi|331671382|ref|ZP_08372180.1| protein PmbA [Escherichia coli TA280]
gi|332281027|ref|ZP_08393440.1| peptidase pmbA [Shigella sp. D9]
gi|378714814|ref|YP_005279707.1| peptidase U62 modulator of DNA gyrase [Escherichia coli KO11FL]
gi|386278905|ref|ZP_10056598.1| protein pmbA [Escherichia sp. 4_1_40B]
gi|386597253|ref|YP_006093653.1| peptidase U62 modulator of DNA gyrase [Escherichia coli DH1]
gi|386611629|ref|YP_006127115.1| peptidase [Escherichia coli W]
gi|386703036|ref|YP_006166873.1| peptidase PmbA [Escherichia coli KO11FL]
gi|386712178|ref|YP_006175899.1| peptidase PmbA [Escherichia coli W]
gi|387623864|ref|YP_006131492.1| putative peptide maturation protein [Escherichia coli DH1]
gi|387885456|ref|YP_006315758.1| peptidase PmbA [Escherichia coli Xuzhou21]
gi|388480181|ref|YP_492376.1| peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Escherichia coli str. K-12
substr. W3110]
gi|415781484|ref|ZP_11491073.1| modulator of DNA gyrase family protein [Escherichia coli EPECa14]
gi|415813777|ref|ZP_11505507.1| modulator of DNA gyrase family protein [Escherichia coli LT-68]
gi|415823649|ref|ZP_11512024.1| modulator of DNA gyrase family protein [Escherichia coli OK1180]
gi|415832090|ref|ZP_11517622.1| modulator of DNA gyrase family protein [Escherichia coli OK1357]
gi|415863628|ref|ZP_11536868.1| TldD/PmbA family protein [Escherichia coli MS 85-1]
gi|415878638|ref|ZP_11544360.1| PmbA protein [Escherichia coli MS 79-10]
gi|416326161|ref|ZP_11666485.1| peptidase PmbA [Escherichia coli O157:H7 str. 1125]
gi|416343255|ref|ZP_11677259.1| peptidase PmbA [Escherichia coli EC4100B]
gi|416779522|ref|ZP_11876527.1| peptidase PmbA [Escherichia coli O157:H7 str. G5101]
gi|416834151|ref|ZP_11900840.1| peptidase PmbA [Escherichia coli O157:H7 str. LSU-61]
gi|417088555|ref|ZP_11955156.1| peptidase PmbA [Escherichia coli cloneA_i1]
gi|417133997|ref|ZP_11978782.1| protein PmbA [Escherichia coli 5.0588]
gi|417157023|ref|ZP_11994647.1| protein PmbA [Escherichia coli 96.0497]
gi|417159983|ref|ZP_11996902.1| protein PmbA [Escherichia coli 99.0741]
gi|417209330|ref|ZP_12020695.1| protein PmbA [Escherichia coli JB1-95]
gi|417224724|ref|ZP_12028015.1| protein PmbA [Escherichia coli 96.154]
gi|417244559|ref|ZP_12038502.1| protein PmbA [Escherichia coli 9.0111]
gi|417263015|ref|ZP_12050468.1| protein PmbA [Escherichia coli 2.3916]
gi|417269643|ref|ZP_12057003.1| protein PmbA [Escherichia coli 3.3884]
gi|417297875|ref|ZP_12085118.1| protein PmbA [Escherichia coli 900105 (10e)]
gi|417583906|ref|ZP_12234700.1| modulator of DNA gyrase family protein [Escherichia coli STEC_B2F1]
gi|417584646|ref|ZP_12235430.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_C165-02]
gi|417589459|ref|ZP_12240180.1| modulator of DNA gyrase family protein [Escherichia coli 2534-86]
gi|417605739|ref|ZP_12256273.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_DG131-3]
gi|417631745|ref|ZP_12281971.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_MHI813]
gi|417632301|ref|ZP_12282525.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_S1191]
gi|417864658|ref|ZP_12509704.1| hypothetical protein C22711_1591 [Escherichia coli O104:H4 str.
C227-11]
gi|418305926|ref|ZP_12917720.1| modulator of DNA gyrase family protein [Escherichia coli UMNF18]
gi|418959874|ref|ZP_13511771.1| peptidase U62 modulator of DNA gyrase [Escherichia coli J53]
gi|419803280|ref|ZP_14328452.1| peptidase U62 modulator of DNA gyrase [Escherichia coli AI27]
gi|419921650|ref|ZP_14439690.1| peptidase PmbA [Escherichia coli 541-15]
gi|422815848|ref|ZP_16864063.1| protein pmbA [Escherichia coli M919]
gi|422832499|ref|ZP_16880568.1| pmbA [Escherichia coli E101]
gi|422957798|ref|ZP_16970012.1| protein pmbA [Escherichia coli H494]
gi|422978049|ref|ZP_16977550.1| protein pmbA [Escherichia coli TA124]
gi|422990534|ref|ZP_16981305.1| protein pmbA [Escherichia coli O104:H4 str. C227-11]
gi|422992474|ref|ZP_16983238.1| protein pmbA [Escherichia coli O104:H4 str. C236-11]
gi|422997694|ref|ZP_16988450.1| protein pmbA [Escherichia coli O104:H4 str. 09-7901]
gi|423006181|ref|ZP_16996925.1| protein pmbA [Escherichia coli O104:H4 str. 04-8351]
gi|423007789|ref|ZP_16998527.1| protein pmbA [Escherichia coli O104:H4 str. 11-3677]
gi|423021974|ref|ZP_17012677.1| protein pmbA [Escherichia coli O104:H4 str. 11-4404]
gi|423027128|ref|ZP_17017821.1| protein pmbA [Escherichia coli O104:H4 str. 11-4522]
gi|423032965|ref|ZP_17023649.1| protein pmbA [Escherichia coli O104:H4 str. 11-4623]
gi|423035832|ref|ZP_17026506.1| protein pmbA [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423040950|ref|ZP_17031617.1| protein pmbA [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423047639|ref|ZP_17038296.1| protein pmbA [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423056176|ref|ZP_17044981.1| protein pmbA [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423058187|ref|ZP_17046983.1| protein pmbA [Escherichia coli O104:H4 str. 11-4632 C5]
gi|423700604|ref|ZP_17675063.1| protein pmbA [Escherichia coli H730]
gi|423709588|ref|ZP_17683942.1| protein pmbA [Escherichia coli B799]
gi|424818773|ref|ZP_18243924.1| peptidase PmbA [Escherichia fergusonii ECD227]
gi|427807467|ref|ZP_18974534.1| maturation of antibiotic MccB17 [Escherichia coli chi7122]
gi|427812051|ref|ZP_18979116.1| maturation of antibiotic MccB17, see tld genes [Escherichia coli]
gi|429722026|ref|ZP_19256931.1| protein pmbA [Escherichia coli O104:H4 str. Ec11-9450]
gi|429774105|ref|ZP_19306112.1| protein pmbA [Escherichia coli O104:H4 str. 11-02030]
gi|429779286|ref|ZP_19311245.1| protein pmbA [Escherichia coli O104:H4 str. 11-02033-1]
gi|429783125|ref|ZP_19315042.1| protein pmbA [Escherichia coli O104:H4 str. 11-02092]
gi|429788759|ref|ZP_19320637.1| protein pmbA [Escherichia coli O104:H4 str. 11-02093]
gi|429794962|ref|ZP_19326793.1| protein pmbA [Escherichia coli O104:H4 str. 11-02281]
gi|429800915|ref|ZP_19332696.1| protein pmbA [Escherichia coli O104:H4 str. 11-02318]
gi|429804547|ref|ZP_19336296.1| protein pmbA [Escherichia coli O104:H4 str. 11-02913]
gi|429809355|ref|ZP_19341061.1| protein pmbA [Escherichia coli O104:H4 str. 11-03439]
gi|429815117|ref|ZP_19346779.1| protein pmbA [Escherichia coli O104:H4 str. 11-04080]
gi|429820327|ref|ZP_19351944.1| protein pmbA [Escherichia coli O104:H4 str. 11-03943]
gi|429906380|ref|ZP_19372350.1| protein pmbA [Escherichia coli O104:H4 str. Ec11-9990]
gi|429910524|ref|ZP_19376481.1| protein pmbA [Escherichia coli O104:H4 str. Ec11-9941]
gi|429916417|ref|ZP_19382358.1| protein pmbA [Escherichia coli O104:H4 str. Ec11-4984]
gi|429921455|ref|ZP_19387377.1| protein pmbA [Escherichia coli O104:H4 str. Ec11-5604]
gi|429927271|ref|ZP_19393178.1| protein pmbA [Escherichia coli O104:H4 str. Ec11-4986]
gi|429931205|ref|ZP_19397101.1| protein pmbA [Escherichia coli O104:H4 str. Ec11-4987]
gi|429937749|ref|ZP_19403630.1| protein pmbA [Escherichia coli O104:H4 str. Ec11-4988]
gi|429938464|ref|ZP_19404338.1| protein pmbA [Escherichia coli O104:H4 str. Ec11-5603]
gi|429946103|ref|ZP_19411959.1| protein pmbA [Escherichia coli O104:H4 str. Ec11-6006]
gi|429948750|ref|ZP_19414598.1| protein pmbA [Escherichia coli O104:H4 str. Ec12-0465]
gi|429957017|ref|ZP_19422846.1| protein pmbA [Escherichia coli O104:H4 str. Ec12-0466]
gi|432351419|ref|ZP_19594735.1| protein pmbA [Escherichia coli KTE2]
gi|432365609|ref|ZP_19608755.1| protein pmbA [Escherichia coli KTE5]
gi|432367835|ref|ZP_19610944.1| protein pmbA [Escherichia coli KTE10]
gi|432379479|ref|ZP_19622455.1| protein pmbA [Escherichia coli KTE12]
gi|432404627|ref|ZP_19647364.1| protein pmbA [Escherichia coli KTE26]
gi|432428894|ref|ZP_19671366.1| protein pmbA [Escherichia coli KTE181]
gi|432452552|ref|ZP_19694801.1| protein pmbA [Escherichia coli KTE193]
gi|432463634|ref|ZP_19705761.1| protein pmbA [Escherichia coli KTE204]
gi|432478590|ref|ZP_19720570.1| protein pmbA [Escherichia coli KTE208]
gi|432479200|ref|ZP_19721166.1| protein pmbA [Escherichia coli KTE210]
gi|432492070|ref|ZP_19733922.1| protein pmbA [Escherichia coli KTE213]
gi|432520441|ref|ZP_19757615.1| protein pmbA [Escherichia coli KTE228]
gi|432529151|ref|ZP_19766213.1| protein pmbA [Escherichia coli KTE233]
gi|432540609|ref|ZP_19777495.1| protein pmbA [Escherichia coli KTE235]
gi|432556804|ref|ZP_19793504.1| protein pmbA [Escherichia coli KTE49]
gi|432561734|ref|ZP_19798370.1| protein pmbA [Escherichia coli KTE51]
gi|432578544|ref|ZP_19814984.1| protein pmbA [Escherichia coli KTE56]
gi|432581047|ref|ZP_19817467.1| protein pmbA [Escherichia coli KTE57]
gi|432595638|ref|ZP_19831933.1| protein pmbA [Escherichia coli KTE62]
gi|432614609|ref|ZP_19850747.1| protein pmbA [Escherichia coli KTE75]
gi|432625412|ref|ZP_19861404.1| protein pmbA [Escherichia coli KTE77]
gi|432634233|ref|ZP_19870145.1| protein pmbA [Escherichia coli KTE80]
gi|432635146|ref|ZP_19871038.1| protein pmbA [Escherichia coli KTE81]
gi|432643824|ref|ZP_19879640.1| protein pmbA [Escherichia coli KTE83]
gi|432659082|ref|ZP_19894750.1| protein pmbA [Escherichia coli KTE111]
gi|432663948|ref|ZP_19899553.1| protein pmbA [Escherichia coli KTE116]
gi|432677422|ref|ZP_19912858.1| protein pmbA [Escherichia coli KTE142]
gi|432683716|ref|ZP_19919043.1| protein pmbA [Escherichia coli KTE156]
gi|432689564|ref|ZP_19924822.1| protein pmbA [Escherichia coli KTE161]
gi|432735290|ref|ZP_19970096.1| protein pmbA [Escherichia coli KTE42]
gi|432748334|ref|ZP_19982989.1| protein pmbA [Escherichia coli KTE43]
gi|432752688|ref|ZP_19987261.1| protein pmbA [Escherichia coli KTE29]
gi|432773005|ref|ZP_20007310.1| protein pmbA [Escherichia coli KTE54]
gi|432808481|ref|ZP_20042391.1| protein pmbA [Escherichia coli KTE91]
gi|432829849|ref|ZP_20063460.1| protein pmbA [Escherichia coli KTE135]
gi|432832898|ref|ZP_20066448.1| protein pmbA [Escherichia coli KTE136]
gi|432837334|ref|ZP_20070832.1| protein pmbA [Escherichia coli KTE140]
gi|432856579|ref|ZP_20083921.1| protein pmbA [Escherichia coli KTE144]
gi|432858011|ref|ZP_20084663.1| protein pmbA [Escherichia coli KTE146]
gi|432872273|ref|ZP_20092152.1| protein pmbA [Escherichia coli KTE147]
gi|432878911|ref|ZP_20096081.1| protein pmbA [Escherichia coli KTE154]
gi|432883221|ref|ZP_20098699.1| protein pmbA [Escherichia coli KTE158]
gi|432909194|ref|ZP_20116648.1| protein pmbA [Escherichia coli KTE190]
gi|432932108|ref|ZP_20132010.1| protein pmbA [Escherichia coli KTE184]
gi|432951867|ref|ZP_20145229.1| protein pmbA [Escherichia coli KTE197]
gi|432966000|ref|ZP_20154920.1| protein pmbA [Escherichia coli KTE203]
gi|433021493|ref|ZP_20209559.1| protein pmbA [Escherichia coli KTE105]
gi|433036204|ref|ZP_20223879.1| protein pmbA [Escherichia coli KTE112]
gi|433050714|ref|ZP_20238022.1| protein pmbA [Escherichia coli KTE120]
gi|433055861|ref|ZP_20243001.1| protein pmbA [Escherichia coli KTE122]
gi|433070638|ref|ZP_20257389.1| protein pmbA [Escherichia coli KTE128]
gi|433094631|ref|ZP_20280870.1| protein pmbA [Escherichia coli KTE138]
gi|433132829|ref|ZP_20318241.1| protein pmbA [Escherichia coli KTE163]
gi|433137505|ref|ZP_20322821.1| protein pmbA [Escherichia coli KTE166]
gi|433161398|ref|ZP_20346201.1| protein pmbA [Escherichia coli KTE177]
gi|433181103|ref|ZP_20365465.1| protein pmbA [Escherichia coli KTE82]
gi|433196321|ref|ZP_20380276.1| protein pmbA [Escherichia coli KTE90]
gi|433205999|ref|ZP_20389729.1| protein pmbA [Escherichia coli KTE95]
gi|442592793|ref|ZP_21010757.1| TldE protein, part of TldE/TldD proteolytic complex [Escherichia
coli O10:K5(L):H4 str. ATCC 23506]
gi|84029325|sp|P0AFK1.1|PMBA_ECO57 RecName: Full=Protein PmbA
gi|84029326|sp|P0AFK0.1|PMBA_ECOLI RecName: Full=Protein PmbA; AltName: Full=Protein TldE
gi|12519236|gb|AAG59432.1|AE005655_11 maturation of antibiotic MccB17, see tld genes [Escherichia coli
O157:H7 str. EDL933]
gi|42440|emb|CAA38091.1| pmbA [Escherichia coli K-12]
gi|537077|gb|AAA97132.1| pmbA [Escherichia coli str. K-12 substr. MG1655]
gi|1732440|dbj|BAA07915.1| TldE protein [Escherichia coli]
gi|1790682|gb|AAC77192.1| putative peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Escherichia coli str. K-12
substr. MG1655]
gi|13364689|dbj|BAB38635.1| maturation of antibiotic MccB17 [Escherichia coli O157:H7 str.
Sakai]
gi|85676985|dbj|BAE78235.1| predicted peptidase required for the maturation and secretion of
the antibiotic peptide MccB17 [Escherichia coli str. K12
substr. W3110]
gi|169891512|gb|ACB05219.1| predicted peptidase required for the maturation and secretion of
the antibiotic peptide MccB17 [Escherichia coli str.
K-12 substr. DH10B]
gi|187770300|gb|EDU34144.1| protein PmbA [Escherichia coli O157:H7 str. EC4196]
gi|188999818|gb|EDU68804.1| protein PmbA [Escherichia coli O157:H7 str. EC4076]
gi|189368971|gb|EDU87387.1| protein PmbA [Escherichia coli O157:H7 str. EC4501]
gi|189374994|gb|EDU93410.1| protein PmbA [Escherichia coli O157:H7 str. EC869]
gi|189379559|gb|EDU97975.1| protein PmbA [Escherichia coli O157:H7 str. EC508]
gi|208734735|gb|EDZ83422.1| protein PmbA [Escherichia coli O157:H7 str. EC4045]
gi|208740815|gb|EDZ88497.1| protein PmbA [Escherichia coli O157:H7 str. EC4042]
gi|209749698|gb|ACI73156.1| maturation of antibiotic MccB17 [Escherichia coli]
gi|209749700|gb|ACI73157.1| maturation of antibiotic MccB17 [Escherichia coli]
gi|209749702|gb|ACI73158.1| maturation of antibiotic MccB17 [Escherichia coli]
gi|209749704|gb|ACI73159.1| maturation of antibiotic MccB17 [Escherichia coli]
gi|209749706|gb|ACI73160.1| maturation of antibiotic MccB17 [Escherichia coli]
gi|218354717|emb|CAV01759.1| peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Escherichia coli 55989]
gi|218363554|emb|CAR01209.1| peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Escherichia coli IAI1]
gi|218368164|emb|CAR05973.1| peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Escherichia coli S88]
gi|218372924|emb|CAR20806.1| peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Escherichia coli IAI39]
gi|218434941|emb|CAR15880.1| peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Escherichia coli UMN026]
gi|238862798|gb|ACR64796.1| predicted peptidase required for the maturation and secretion of
the antibiotic peptide MccB17 [Escherichia coli BW2952]
gi|254595654|gb|ACT75015.1| predicted peptidase required for the maturation and secretion of
the antibiotic peptide MccB17 [Escherichia coli O157:H7
str. TW14359]
gi|257757036|dbj|BAI28538.1| predicted peptidase [Escherichia coli O26:H11 str. 11368]
gi|257767346|dbj|BAI38841.1| predicted peptidase [Escherichia coli O111:H- str. 11128]
gi|260450942|gb|ACX41364.1| peptidase U62 modulator of DNA gyrase [Escherichia coli DH1]
gi|290765521|gb|ADD59482.1| Putative peptide maturation protein [Escherichia coli O55:H7 str.
CB9615]
gi|291430455|gb|EFF03453.1| peptidase PmbA [Escherichia coli B185]
gi|300357020|gb|EFJ72890.1| TldD/PmbA family protein [Escherichia coli MS 198-1]
gi|300402088|gb|EFJ85626.1| TldD/PmbA family protein [Escherichia coli MS 84-1]
gi|300420814|gb|EFK04125.1| TldD/PmbA family protein [Escherichia coli MS 182-1]
gi|300463905|gb|EFK27398.1| TldD/PmbA family protein [Escherichia coli MS 187-1]
gi|300528946|gb|EFK50008.1| TldD/PmbA family protein [Escherichia coli MS 107-1]
gi|300842188|gb|EFK69948.1| TldD/PmbA family protein [Escherichia coli MS 124-1]
gi|300844426|gb|EFK72186.1| TldD/PmbA family protein [Escherichia coli MS 78-1]
gi|306907157|gb|EFN37664.1| peptidase U62 modulator of DNA gyrase [Escherichia coli W]
gi|308123159|gb|EFO60421.1| TldD/PmbA family protein [Escherichia coli MS 145-7]
gi|312289159|gb|EFR17053.1| modulator of DNA gyrase family protein [Escherichia coli 2362-75]
gi|315063546|gb|ADT77873.1| predicted peptidase required for the maturation and secretion of
the antibiotic peptide MccB17 [Escherichia coli W]
gi|315138788|dbj|BAJ45947.1| putative peptide maturation protein [Escherichia coli DH1]
gi|315255590|gb|EFU35558.1| TldD/PmbA family protein [Escherichia coli MS 85-1]
gi|320200636|gb|EFW75222.1| peptidase PmbA [Escherichia coli EC4100B]
gi|320638994|gb|EFX08640.1| peptidase PmbA [Escherichia coli O157:H7 str. G5101]
gi|320665853|gb|EFX32890.1| peptidase PmbA [Escherichia coli O157:H7 str. LSU-61]
gi|323157565|gb|EFZ43674.1| modulator of DNA gyrase family protein [Escherichia coli EPECa14]
gi|323171675|gb|EFZ57321.1| modulator of DNA gyrase family protein [Escherichia coli LT-68]
gi|323176150|gb|EFZ61742.1| modulator of DNA gyrase family protein [Escherichia coli OK1180]
gi|323181968|gb|EFZ67379.1| modulator of DNA gyrase family protein [Escherichia coli OK1357]
gi|323380375|gb|ADX52643.1| peptidase U62 modulator of DNA gyrase [Escherichia coli KO11FL]
gi|325499793|gb|EGC97652.1| peptidase PmbA [Escherichia fergusonii ECD227]
gi|326345433|gb|EGD69176.1| peptidase PmbA [Escherichia coli O157:H7 str. 1125]
gi|331046424|gb|EGI18514.1| protein PmbA [Escherichia coli M718]
gi|331071227|gb|EGI42584.1| protein PmbA [Escherichia coli TA280]
gi|332103379|gb|EGJ06725.1| peptidase pmbA [Shigella sp. D9]
gi|339418024|gb|AEJ59696.1| modulator of DNA gyrase family protein [Escherichia coli UMNF18]
gi|341917947|gb|EGT67562.1| hypothetical protein C22711_1591 [Escherichia coli O104:H4 str.
C227-11]
gi|342927218|gb|EGU95940.1| PmbA protein [Escherichia coli MS 79-10]
gi|345332137|gb|EGW64595.1| modulator of DNA gyrase family protein [Escherichia coli STEC_B2F1]
gi|345342829|gb|EGW75221.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_C165-02]
gi|345345817|gb|EGW78153.1| modulator of DNA gyrase family protein [Escherichia coli 2534-86]
gi|345366593|gb|EGW98682.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_DG131-3]
gi|345367896|gb|EGW99902.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_MHI813]
gi|345391819|gb|EGX21605.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_S1191]
gi|354859047|gb|EHF19495.1| protein pmbA [Escherichia coli O104:H4 str. 04-8351]
gi|354859520|gb|EHF19967.1| protein pmbA [Escherichia coli O104:H4 str. C227-11]
gi|354866217|gb|EHF26640.1| protein pmbA [Escherichia coli O104:H4 str. C236-11]
gi|354876562|gb|EHF36922.1| protein pmbA [Escherichia coli O104:H4 str. 09-7901]
gi|354883457|gb|EHF43777.1| protein pmbA [Escherichia coli O104:H4 str. 11-4404]
gi|354884658|gb|EHF44969.1| protein pmbA [Escherichia coli O104:H4 str. 11-3677]
gi|354886911|gb|EHF47192.1| protein pmbA [Escherichia coli O104:H4 str. 11-4522]
gi|354890876|gb|EHF51113.1| protein pmbA [Escherichia coli O104:H4 str. 11-4623]
gi|354903056|gb|EHF63167.1| protein pmbA [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354906496|gb|EHF66572.1| protein pmbA [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354908632|gb|EHF68682.1| protein pmbA [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354910642|gb|EHF70660.1| protein pmbA [Escherichia coli O104:H4 str. 11-4632 C4]
gi|354919366|gb|EHF79315.1| protein pmbA [Escherichia coli O104:H4 str. 11-4632 C5]
gi|355349027|gb|EHF98241.1| peptidase PmbA [Escherichia coli cloneA_i1]
gi|359334341|dbj|BAL40788.1| predicted peptidase required for the maturation and secretion of
the antibiotic peptide MccB17 [Escherichia coli str.
K-12 substr. MDS42]
gi|371592977|gb|EHN81869.1| protein pmbA [Escherichia coli TA124]
gi|371597372|gb|EHN86194.1| protein pmbA [Escherichia coli H494]
gi|371614648|gb|EHO03131.1| pmbA [Escherichia coli E101]
gi|383394563|gb|AFH19521.1| peptidase PmbA [Escherichia coli KO11FL]
gi|383407870|gb|AFH14113.1| peptidase PmbA [Escherichia coli W]
gi|384377566|gb|EIE35460.1| peptidase U62 modulator of DNA gyrase [Escherichia coli J53]
gi|384473698|gb|EIE57737.1| peptidase U62 modulator of DNA gyrase [Escherichia coli AI27]
gi|385540747|gb|EIF87566.1| protein pmbA [Escherichia coli M919]
gi|385705963|gb|EIG43025.1| protein pmbA [Escherichia coli B799]
gi|385714031|gb|EIG50956.1| protein pmbA [Escherichia coli H730]
gi|386124096|gb|EIG72680.1| protein pmbA [Escherichia sp. 4_1_40B]
gi|386151851|gb|EIH03140.1| protein PmbA [Escherichia coli 5.0588]
gi|386165773|gb|EIH32293.1| protein PmbA [Escherichia coli 96.0497]
gi|386174474|gb|EIH46467.1| protein PmbA [Escherichia coli 99.0741]
gi|386196354|gb|EIH90579.1| protein PmbA [Escherichia coli JB1-95]
gi|386199772|gb|EIH98763.1| protein PmbA [Escherichia coli 96.154]
gi|386210774|gb|EII21245.1| protein PmbA [Escherichia coli 9.0111]
gi|386223412|gb|EII45782.1| protein PmbA [Escherichia coli 2.3916]
gi|386228448|gb|EII55804.1| protein PmbA [Escherichia coli 3.3884]
gi|386258619|gb|EIJ14097.1| protein PmbA [Escherichia coli 900105 (10e)]
gi|386798914|gb|AFJ31948.1| peptidase PmbA [Escherichia coli Xuzhou21]
gi|388397309|gb|EIL58322.1| peptidase PmbA [Escherichia coli 541-15]
gi|412965649|emb|CCK49582.1| maturation of antibiotic MccB17 [Escherichia coli chi7122]
gi|412972230|emb|CCJ46901.1| maturation of antibiotic MccB17, see tld genes [Escherichia coli]
gi|429353696|gb|EKY90403.1| protein pmbA [Escherichia coli O104:H4 str. 11-02030]
gi|429354448|gb|EKY91147.1| protein pmbA [Escherichia coli O104:H4 str. 11-02033-1]
gi|429355210|gb|EKY91903.1| protein pmbA [Escherichia coli O104:H4 str. 11-02092]
gi|429368375|gb|EKZ04963.1| protein pmbA [Escherichia coli O104:H4 str. 11-02093]
gi|429369612|gb|EKZ06188.1| protein pmbA [Escherichia coli O104:H4 str. 11-02281]
gi|429371498|gb|EKZ08054.1| protein pmbA [Escherichia coli O104:H4 str. 11-02318]
gi|429383845|gb|EKZ20303.1| protein pmbA [Escherichia coli O104:H4 str. 11-02913]
gi|429387370|gb|EKZ23811.1| protein pmbA [Escherichia coli O104:H4 str. 11-03439]
gi|429387482|gb|EKZ23922.1| protein pmbA [Escherichia coli O104:H4 str. 11-03943]
gi|429398596|gb|EKZ34931.1| protein pmbA [Escherichia coli O104:H4 str. 11-04080]
gi|429400767|gb|EKZ37081.1| protein pmbA [Escherichia coli O104:H4 str. Ec11-9990]
gi|429401499|gb|EKZ37800.1| protein pmbA [Escherichia coli O104:H4 str. Ec11-9450]
gi|429411618|gb|EKZ47825.1| protein pmbA [Escherichia coli O104:H4 str. Ec11-4984]
gi|429413568|gb|EKZ49754.1| protein pmbA [Escherichia coli O104:H4 str. Ec11-4986]
gi|429420425|gb|EKZ56554.1| protein pmbA [Escherichia coli O104:H4 str. Ec11-4987]
gi|429424364|gb|EKZ60466.1| protein pmbA [Escherichia coli O104:H4 str. Ec11-4988]
gi|429429761|gb|EKZ65828.1| protein pmbA [Escherichia coli O104:H4 str. Ec11-5603]
gi|429437512|gb|EKZ73518.1| protein pmbA [Escherichia coli O104:H4 str. Ec11-5604]
gi|429442884|gb|EKZ78837.1| protein pmbA [Escherichia coli O104:H4 str. Ec12-0465]
gi|429446137|gb|EKZ82074.1| protein pmbA [Escherichia coli O104:H4 str. Ec11-6006]
gi|429452774|gb|EKZ88654.1| protein pmbA [Escherichia coli O104:H4 str. Ec12-0466]
gi|429457325|gb|EKZ93165.1| protein pmbA [Escherichia coli O104:H4 str. Ec11-9941]
gi|430881766|gb|ELC04979.1| protein pmbA [Escherichia coli KTE2]
gi|430882160|gb|ELC05363.1| protein pmbA [Escherichia coli KTE5]
gi|430890357|gb|ELC12994.1| protein pmbA [Escherichia coli KTE10]
gi|430894684|gb|ELC16969.1| protein pmbA [Escherichia coli KTE12]
gi|430921265|gb|ELC42094.1| protein pmbA [Escherichia coli KTE26]
gi|430949332|gb|ELC68774.1| protein pmbA [Escherichia coli KTE181]
gi|430975961|gb|ELC92841.1| protein pmbA [Escherichia coli KTE193]
gi|430984792|gb|ELD01414.1| protein pmbA [Escherichia coli KTE204]
gi|431000525|gb|ELD16585.1| protein pmbA [Escherichia coli KTE208]
gi|431011338|gb|ELD25413.1| protein pmbA [Escherichia coli KTE210]
gi|431015651|gb|ELD29204.1| protein pmbA [Escherichia coli KTE213]
gi|431046691|gb|ELD56788.1| protein pmbA [Escherichia coli KTE228]
gi|431058433|gb|ELD67828.1| protein pmbA [Escherichia coli KTE233]
gi|431065875|gb|ELD74628.1| protein pmbA [Escherichia coli KTE235]
gi|431095593|gb|ELE01202.1| protein pmbA [Escherichia coli KTE49]
gi|431101936|gb|ELE06845.1| protein pmbA [Escherichia coli KTE51]
gi|431110566|gb|ELE14492.1| protein pmbA [Escherichia coli KTE56]
gi|431123619|gb|ELE26355.1| protein pmbA [Escherichia coli KTE57]
gi|431135141|gb|ELE37069.1| protein pmbA [Escherichia coli KTE62]
gi|431158801|gb|ELE59392.1| protein pmbA [Escherichia coli KTE75]
gi|431166272|gb|ELE66598.1| protein pmbA [Escherichia coli KTE80]
gi|431166806|gb|ELE67112.1| protein pmbA [Escherichia coli KTE77]
gi|431175238|gb|ELE75258.1| protein pmbA [Escherichia coli KTE81]
gi|431176306|gb|ELE76271.1| protein pmbA [Escherichia coli KTE83]
gi|431204574|gb|ELF03133.1| protein pmbA [Escherichia coli KTE111]
gi|431205690|gb|ELF04131.1| protein pmbA [Escherichia coli KTE116]
gi|431209170|gb|ELF07285.1| protein pmbA [Escherichia coli KTE142]
gi|431226231|gb|ELF23397.1| protein pmbA [Escherichia coli KTE156]
gi|431233219|gb|ELF28812.1| protein pmbA [Escherichia coli KTE161]
gi|431288410|gb|ELF79177.1| protein pmbA [Escherichia coli KTE43]
gi|431288607|gb|ELF79369.1| protein pmbA [Escherichia coli KTE42]
gi|431292351|gb|ELF82741.1| protein pmbA [Escherichia coli KTE29]
gi|431322402|gb|ELG09989.1| protein pmbA [Escherichia coli KTE54]
gi|431351704|gb|ELG38490.1| protein pmbA [Escherichia coli KTE91]
gi|431381018|gb|ELG65653.1| protein pmbA [Escherichia coli KTE135]
gi|431390097|gb|ELG73806.1| protein pmbA [Escherichia coli KTE136]
gi|431393147|gb|ELG76712.1| protein pmbA [Escherichia coli KTE140]
gi|431395791|gb|ELG79285.1| protein pmbA [Escherichia coli KTE144]
gi|431406587|gb|ELG89807.1| protein pmbA [Escherichia coli KTE147]
gi|431409768|gb|ELG92941.1| protein pmbA [Escherichia coli KTE146]
gi|431415666|gb|ELG98162.1| protein pmbA [Escherichia coli KTE154]
gi|431421249|gb|ELH03463.1| protein pmbA [Escherichia coli KTE158]
gi|431449741|gb|ELH30309.1| protein pmbA [Escherichia coli KTE190]
gi|431457118|gb|ELH37457.1| protein pmbA [Escherichia coli KTE184]
gi|431475042|gb|ELH54847.1| protein pmbA [Escherichia coli KTE197]
gi|431475361|gb|ELH55165.1| protein pmbA [Escherichia coli KTE203]
gi|431525662|gb|ELI02444.1| protein pmbA [Escherichia coli KTE105]
gi|431544115|gb|ELI19070.1| protein pmbA [Escherichia coli KTE112]
gi|431560538|gb|ELI34051.1| protein pmbA [Escherichia coli KTE120]
gi|431563810|gb|ELI37007.1| protein pmbA [Escherichia coli KTE122]
gi|431577342|gb|ELI49978.1| protein pmbA [Escherichia coli KTE128]
gi|431605172|gb|ELI74568.1| protein pmbA [Escherichia coli KTE138]
gi|431640601|gb|ELJ08357.1| protein pmbA [Escherichia coli KTE163]
gi|431652262|gb|ELJ19417.1| protein pmbA [Escherichia coli KTE166]
gi|431671264|gb|ELJ37546.1| protein pmbA [Escherichia coli KTE177]
gi|431696616|gb|ELJ61776.1| protein pmbA [Escherichia coli KTE82]
gi|431712097|gb|ELJ76400.1| protein pmbA [Escherichia coli KTE90]
gi|431714207|gb|ELJ78400.1| protein pmbA [Escherichia coli KTE95]
gi|441607434|emb|CCP96198.1| TldE protein, part of TldE/TldD proteolytic complex [Escherichia
coli O10:K5(L):H4 str. ATCC 23506]
Length = 450
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|157159292|ref|YP_001465743.1| peptidase PmbA [Escherichia coli E24377A]
gi|157163709|ref|YP_001461027.1| peptidase PmbA [Escherichia coli HS]
gi|187733964|ref|YP_001882981.1| peptidase PmbA [Shigella boydii CDC 3083-94]
gi|188025108|ref|ZP_02776097.2| protein PmbA [Escherichia coli O157:H7 str. EC4113]
gi|189402068|ref|ZP_02779818.2| protein PmbA [Escherichia coli O157:H7 str. EC4401]
gi|189402820|ref|ZP_02791527.2| protein PmbA [Escherichia coli O157:H7 str. EC4486]
gi|195937260|ref|ZP_03082642.1| peptidase PmbA [Escherichia coli O157:H7 str. EC4024]
gi|208807790|ref|ZP_03250127.1| protein PmbA [Escherichia coli O157:H7 str. EC4206]
gi|209396110|ref|YP_002273777.1| peptidase PmbA [Escherichia coli O157:H7 str. EC4115]
gi|217325809|ref|ZP_03441893.1| protein PmbA [Escherichia coli O157:H7 str. TW14588]
gi|293402860|ref|ZP_06646957.1| peptidase PmbA [Escherichia coli FVEC1412]
gi|293407959|ref|ZP_06651799.1| peptidase PmbA [Escherichia coli B354]
gi|298378388|ref|ZP_06988272.1| peptidase PmbA [Escherichia coli FVEC1302]
gi|301028067|ref|ZP_07191348.1| TldD/PmbA family protein [Escherichia coli MS 196-1]
gi|331665904|ref|ZP_08366798.1| protein PmbA [Escherichia coli TA143]
gi|331681258|ref|ZP_08381895.1| protein PmbA [Escherichia coli H299]
gi|386622000|ref|YP_006141580.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Escherichia coli NA114]
gi|386707475|ref|YP_006171322.1| peptidase PmbA [Escherichia coli P12b]
gi|387509693|ref|YP_006161949.1| peptidase PmbA [Escherichia coli O55:H7 str. RM12579]
gi|407467282|ref|YP_006786276.1| peptidase PmbA [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407483999|ref|YP_006781149.1| peptidase PmbA [Escherichia coli O104:H4 str. 2011C-3493]
gi|410484542|ref|YP_006772088.1| peptidase PmbA [Escherichia coli O104:H4 str. 2009EL-2050]
gi|416266009|ref|ZP_11641462.1| peptidase PmbA [Shigella dysenteriae CDC 74-1112]
gi|416289326|ref|ZP_11649628.1| peptidase PmbA [Shigella boydii ATCC 9905]
gi|416309026|ref|ZP_11655479.1| peptidase PmbA [Escherichia coli O157:H7 str. 1044]
gi|416319277|ref|ZP_11661829.1| peptidase PmbA [Escherichia coli O157:H7 str. EC1212]
gi|416338553|ref|ZP_11674702.1| peptidase PmbA [Escherichia coli WV_060327]
gi|416790720|ref|ZP_11881417.1| peptidase PmbA [Escherichia coli O157:H- str. 493-89]
gi|416802520|ref|ZP_11886305.1| peptidase PmbA [Escherichia coli O157:H- str. H 2687]
gi|416813344|ref|ZP_11891243.1| peptidase PmbA [Escherichia coli O55:H7 str. 3256-97]
gi|416823904|ref|ZP_11895846.1| peptidase PmbA [Escherichia coli O55:H7 str. USDA 5905]
gi|417139844|ref|ZP_11983191.1| protein PmbA [Escherichia coli 97.0259]
gi|417191587|ref|ZP_12013877.1| protein PmbA [Escherichia coli 4.0522]
gi|417273975|ref|ZP_12061320.1| protein PmbA [Escherichia coli 2.4168]
gi|417278871|ref|ZP_12066184.1| protein PmbA [Escherichia coli 3.2303]
gi|417293644|ref|ZP_12080923.1| protein PmbA [Escherichia coli B41]
gi|417310867|ref|ZP_12097669.1| putative peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Escherichia coli PCN033]
gi|417599697|ref|ZP_12250313.1| modulator of DNA gyrase family protein [Escherichia coli 3030-1]
gi|417605218|ref|ZP_12255774.1| modulator of DNA gyrase family protein [Escherichia coli STEC_94C]
gi|417615941|ref|ZP_12266383.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_EH250]
gi|417620949|ref|ZP_12271345.1| modulator of DNA gyrase family protein [Escherichia coli G58-1]
gi|417758820|ref|ZP_12406874.1| modulator of DNA gyrase family protein [Escherichia coli DEC2B]
gi|417807998|ref|ZP_12454920.1| peptidase PmbA [Escherichia coli O104:H4 str. LB226692]
gi|417835732|ref|ZP_12482168.1| peptidase PmbA [Escherichia coli O104:H4 str. 01-09591]
gi|417944460|ref|ZP_12587702.1| peptidase PmbA [Escherichia coli XH140A]
gi|417976378|ref|ZP_12617172.1| peptidase PmbA [Escherichia coli XH001]
gi|418999798|ref|ZP_13547368.1| modulator of DNA gyrase family protein [Escherichia coli DEC1A]
gi|419005177|ref|ZP_13552678.1| modulator of DNA gyrase family protein [Escherichia coli DEC1B]
gi|419010835|ref|ZP_13558235.1| modulator of DNA gyrase family protein [Escherichia coli DEC1C]
gi|419021468|ref|ZP_13568758.1| modulator of DNA gyrase family protein [Escherichia coli DEC1E]
gi|419026944|ref|ZP_13574150.1| protein pmbA [Escherichia coli DEC2A]
gi|419032141|ref|ZP_13579272.1| modulator of DNA gyrase family protein [Escherichia coli DEC2C]
gi|419037536|ref|ZP_13584602.1| modulator of DNA gyrase family protein [Escherichia coli DEC2D]
gi|419042800|ref|ZP_13589807.1| modulator of DNA gyrase family protein [Escherichia coli DEC2E]
gi|419048373|ref|ZP_13595298.1| modulator of DNA gyrase family protein [Escherichia coli DEC3A]
gi|419054115|ref|ZP_13600978.1| modulator of DNA gyrase family protein [Escherichia coli DEC3B]
gi|419054469|ref|ZP_13601330.1| modulator of DNA gyrase family protein [Escherichia coli DEC3C]
gi|419065545|ref|ZP_13612246.1| modulator of DNA gyrase family protein [Escherichia coli DEC3D]
gi|419072543|ref|ZP_13618136.1| modulator of DNA gyrase family protein [Escherichia coli DEC3E]
gi|419073214|ref|ZP_13618790.1| modulator of DNA gyrase family protein [Escherichia coli DEC3F]
gi|419083586|ref|ZP_13629023.1| modulator of DNA gyrase family protein [Escherichia coli DEC4A]
gi|419089590|ref|ZP_13634934.1| modulator of DNA gyrase family protein [Escherichia coli DEC4B]
gi|419095802|ref|ZP_13641071.1| modulator of DNA gyrase family protein [Escherichia coli DEC4C]
gi|419101298|ref|ZP_13646479.1| modulator of DNA gyrase family protein [Escherichia coli DEC4D]
gi|419106873|ref|ZP_13651986.1| modulator of DNA gyrase family protein [Escherichia coli DEC4E]
gi|419112316|ref|ZP_13657361.1| modulator of DNA gyrase family protein [Escherichia coli DEC4F]
gi|419117831|ref|ZP_13662832.1| modulator of DNA gyrase family protein [Escherichia coli DEC5A]
gi|419123612|ref|ZP_13668547.1| modulator of DNA gyrase family protein [Escherichia coli DEC5B]
gi|419129175|ref|ZP_13674038.1| modulator of DNA gyrase family protein [Escherichia coli DEC5C]
gi|419129389|ref|ZP_13674248.1| modulator of DNA gyrase family protein [Escherichia coli DEC5D]
gi|419139715|ref|ZP_13684499.1| protein pmbA [Escherichia coli DEC5E]
gi|419156804|ref|ZP_13701350.1| protein pmbA [Escherichia coli DEC6C]
gi|419162138|ref|ZP_13706623.1| protein pmbA [Escherichia coli DEC6D]
gi|419167301|ref|ZP_13711742.1| modulator of DNA gyrase family protein [Escherichia coli DEC6E]
gi|419200107|ref|ZP_13743386.1| protein pmbA [Escherichia coli DEC8A]
gi|419206508|ref|ZP_13749651.1| modulator of DNA gyrase family protein [Escherichia coli DEC8B]
gi|419212829|ref|ZP_13755882.1| modulator of DNA gyrase family protein [Escherichia coli DEC8C]
gi|419218587|ref|ZP_13761570.1| modulator of DNA gyrase family protein [Escherichia coli DEC8D]
gi|419224428|ref|ZP_13767330.1| modulator of DNA gyrase family protein [Escherichia coli DEC8E]
gi|419230030|ref|ZP_13772853.1| modulator of DNA gyrase family protein [Escherichia coli DEC9A]
gi|419235516|ref|ZP_13778273.1| modulator of DNA gyrase family protein [Escherichia coli DEC9B]
gi|419240831|ref|ZP_13783528.1| modulator of DNA gyrase family protein [Escherichia coli DEC9C]
gi|419246539|ref|ZP_13789163.1| modulator of DNA gyrase family protein [Escherichia coli DEC9D]
gi|419252274|ref|ZP_13794832.1| modulator of DNA gyrase family protein [Escherichia coli DEC9E]
gi|419258046|ref|ZP_13800536.1| modulator of DNA gyrase family protein [Escherichia coli DEC10A]
gi|419264226|ref|ZP_13806626.1| modulator of DNA gyrase family protein [Escherichia coli DEC10B]
gi|419270140|ref|ZP_13812479.1| modulator of DNA gyrase family protein [Escherichia coli DEC10C]
gi|419275709|ref|ZP_13817990.1| modulator of DNA gyrase family protein [Escherichia coli DEC10D]
gi|419281084|ref|ZP_13823317.1| modulator of DNA gyrase family protein [Escherichia coli DEC10E]
gi|419281458|ref|ZP_13823683.1| modulator of DNA gyrase family protein [Escherichia coli DEC10F]
gi|419343505|ref|ZP_13884892.1| modulator of DNA gyrase family protein [Escherichia coli DEC13A]
gi|419352567|ref|ZP_13893887.1| modulator of DNA gyrase family protein [Escherichia coli DEC13B]
gi|419358094|ref|ZP_13899330.1| modulator of DNA gyrase family protein [Escherichia coli DEC13C]
gi|419363056|ref|ZP_13904255.1| modulator of DNA gyrase family protein [Escherichia coli DEC13D]
gi|419368042|ref|ZP_13909180.1| modulator of DNA gyrase family protein [Escherichia coli DEC13E]
gi|419378531|ref|ZP_13919537.1| modulator of DNA gyrase family protein [Escherichia coli DEC14B]
gi|419383895|ref|ZP_13924825.1| modulator of DNA gyrase family protein [Escherichia coli DEC14C]
gi|419389127|ref|ZP_13929980.1| modulator of DNA gyrase family protein [Escherichia coli DEC14D]
gi|419394580|ref|ZP_13935370.1| modulator of DNA gyrase family protein [Escherichia coli DEC15A]
gi|419399712|ref|ZP_13940466.1| modulator of DNA gyrase family protein [Escherichia coli DEC15B]
gi|419404960|ref|ZP_13945671.1| modulator of DNA gyrase family protein [Escherichia coli DEC15C]
gi|419410116|ref|ZP_13950795.1| modulator of DNA gyrase family protein [Escherichia coli DEC15D]
gi|419415683|ref|ZP_13956308.1| modulator of DNA gyrase family protein [Escherichia coli DEC15E]
gi|419810355|ref|ZP_14335236.1| peptidase PmbA [Escherichia coli O32:H37 str. P4]
gi|419874135|ref|ZP_14396085.1| peptidase PmbA [Escherichia coli O111:H11 str. CVM9534]
gi|419883706|ref|ZP_14404782.1| peptidase PmbA [Escherichia coli O111:H11 str. CVM9545]
gi|419887431|ref|ZP_14408016.1| peptidase PmbA [Escherichia coli O111:H8 str. CVM9570]
gi|419894722|ref|ZP_14414617.1| peptidase PmbA [Escherichia coli O111:H8 str. CVM9574]
gi|419903748|ref|ZP_14422764.1| peptidase PmbA [Escherichia coli O26:H11 str. CVM9942]
gi|419909977|ref|ZP_14428509.1| peptidase U62 modulator of DNA gyrase [Escherichia coli O26:H11
str. CVM10026]
gi|419935625|ref|ZP_14452695.1| peptidase PmbA [Escherichia coli 576-1]
gi|419938423|ref|ZP_14455257.1| peptidase PmbA [Escherichia coli 75]
gi|419942841|ref|ZP_14459421.1| peptidase PmbA [Escherichia coli HM605]
gi|419951182|ref|ZP_14467379.1| peptidase PmbA [Escherichia coli CUMT8]
gi|420088340|ref|ZP_14600233.1| peptidase PmbA [Escherichia coli O111:H8 str. CVM9602]
gi|420093504|ref|ZP_14605161.1| peptidase PmbA [Escherichia coli O111:H8 str. CVM9634]
gi|420103726|ref|ZP_14614540.1| peptidase PmbA [Escherichia coli O111:H11 str. CVM9455]
gi|420110518|ref|ZP_14620495.1| peptidase PmbA [Escherichia coli O111:H11 str. CVM9553]
gi|420117047|ref|ZP_14626416.1| peptidase PmbA [Escherichia coli O26:H11 str. CVM10021]
gi|420120074|ref|ZP_14629306.1| peptidase PmbA [Escherichia coli O26:H11 str. CVM10030]
gi|420129059|ref|ZP_14637601.1| peptidase PmbA [Escherichia coli O26:H11 str. CVM10224]
gi|420130926|ref|ZP_14639399.1| peptidase PmbA [Escherichia coli O26:H11 str. CVM9952]
gi|420267440|ref|ZP_14769851.1| protein pmbA [Escherichia coli PA22]
gi|420272802|ref|ZP_14775137.1| protein pmbA [Escherichia coli PA40]
gi|420283813|ref|ZP_14786038.1| protein pmbA [Escherichia coli TW06591]
gi|420284466|ref|ZP_14786686.1| protein pmbA [Escherichia coli TW10246]
gi|420295441|ref|ZP_14797545.1| protein pmbA [Escherichia coli TW11039]
gi|420295579|ref|ZP_14797677.1| protein pmbA [Escherichia coli TW09109]
gi|420301354|ref|ZP_14803389.1| protein pmbA [Escherichia coli TW10119]
gi|420307216|ref|ZP_14809192.1| protein pmbA [Escherichia coli EC1738]
gi|420318207|ref|ZP_14820069.1| protein pmbA [Escherichia coli EC1734]
gi|420339134|ref|ZP_14840685.1| protein pmbA [Shigella flexneri K-315]
gi|420383103|ref|ZP_14882524.1| protein pmbA [Shigella dysenteriae 225-75]
gi|421815363|ref|ZP_16251053.1| protein pmbA [Escherichia coli 8.0416]
gi|421821105|ref|ZP_16256581.1| protein pmbA [Escherichia coli 10.0821]
gi|421827162|ref|ZP_16262508.1| protein pmbA [Escherichia coli FRIK920]
gi|421828195|ref|ZP_16263527.1| protein pmbA [Escherichia coli PA7]
gi|422768112|ref|ZP_16821837.1| PmbA protein [Escherichia coli E1520]
gi|422772795|ref|ZP_16826482.1| PmbA protein [Escherichia coli E482]
gi|423728553|ref|ZP_17702287.1| protein pmbA [Escherichia coli PA31]
gi|424080604|ref|ZP_17817534.1| protein pmbA [Escherichia coli FDA505]
gi|424087014|ref|ZP_17823473.1| protein pmbA [Escherichia coli FDA517]
gi|424093429|ref|ZP_17829327.1| protein pmbA [Escherichia coli FRIK1996]
gi|424100130|ref|ZP_17835348.1| protein pmbA [Escherichia coli FRIK1985]
gi|424106326|ref|ZP_17841023.1| protein pmbA [Escherichia coli FRIK1990]
gi|424112934|ref|ZP_17847137.1| protein pmbA [Escherichia coli 93-001]
gi|424118883|ref|ZP_17852691.1| protein pmbA [Escherichia coli PA3]
gi|424125066|ref|ZP_17858338.1| protein pmbA [Escherichia coli PA5]
gi|424131249|ref|ZP_17864126.1| protein pmbA [Escherichia coli PA9]
gi|424137567|ref|ZP_17869973.1| protein pmbA [Escherichia coli PA10]
gi|424144104|ref|ZP_17875928.1| protein pmbA [Escherichia coli PA14]
gi|424150468|ref|ZP_17881820.1| protein pmbA [Escherichia coli PA15]
gi|424170260|ref|ZP_17887260.1| protein pmbA [Escherichia coli PA24]
gi|424259860|ref|ZP_17892796.1| protein pmbA [Escherichia coli PA25]
gi|424336555|ref|ZP_17898735.1| protein pmbA [Escherichia coli PA28]
gi|424452817|ref|ZP_17904425.1| protein pmbA [Escherichia coli PA32]
gi|424458975|ref|ZP_17910041.1| protein pmbA [Escherichia coli PA33]
gi|424465538|ref|ZP_17915810.1| protein pmbA [Escherichia coli PA39]
gi|424471755|ref|ZP_17921523.1| protein pmbA [Escherichia coli PA41]
gi|424478222|ref|ZP_17927513.1| protein pmbA [Escherichia coli PA42]
gi|424484022|ref|ZP_17932977.1| protein pmbA [Escherichia coli TW07945]
gi|424490222|ref|ZP_17938728.1| protein pmbA [Escherichia coli TW09098]
gi|424496953|ref|ZP_17944413.1| protein pmbA [Escherichia coli TW09195]
gi|424503538|ref|ZP_17950396.1| protein pmbA [Escherichia coli EC4203]
gi|424509815|ref|ZP_17956150.1| protein pmbA [Escherichia coli EC4196]
gi|424517234|ref|ZP_17961776.1| protein pmbA [Escherichia coli TW14313]
gi|424523346|ref|ZP_17967420.1| protein pmbA [Escherichia coli TW14301]
gi|424529193|ref|ZP_17972882.1| protein pmbA [Escherichia coli EC4421]
gi|424535332|ref|ZP_17978658.1| protein pmbA [Escherichia coli EC4422]
gi|424535531|ref|ZP_17978839.1| protein pmbA [Escherichia coli EC4013]
gi|424547598|ref|ZP_17989894.1| protein pmbA [Escherichia coli EC4402]
gi|424553797|ref|ZP_17995594.1| protein pmbA [Escherichia coli EC4439]
gi|424559986|ref|ZP_18001354.1| protein pmbA [Escherichia coli EC4436]
gi|424566315|ref|ZP_18007292.1| protein pmbA [Escherichia coli EC4437]
gi|424572447|ref|ZP_18012953.1| protein pmbA [Escherichia coli EC4448]
gi|424578602|ref|ZP_18018606.1| protein pmbA [Escherichia coli EC1845]
gi|424584418|ref|ZP_18024039.1| protein pmbA [Escherichia coli EC1863]
gi|424750814|ref|ZP_18178873.1| peptidase PmbA [Escherichia coli O26:H11 str. CFSAN001629]
gi|424755470|ref|ZP_18183341.1| peptidase PmbA [Escherichia coli O111:H11 str. CFSAN001630]
gi|424769218|ref|ZP_18196449.1| peptidase PmbA [Escherichia coli O111:H8 str. CFSAN001632]
gi|425101071|ref|ZP_18503785.1| protein pmbA [Escherichia coli 3.4870]
gi|425107170|ref|ZP_18509457.1| protein pmbA [Escherichia coli 5.2239]
gi|425113110|ref|ZP_18515008.1| protein pmbA [Escherichia coli 6.0172]
gi|425117882|ref|ZP_18519648.1| protein pmbA [Escherichia coli 8.0566]
gi|425122597|ref|ZP_18524259.1| protein pmbA [Escherichia coli 8.0569]
gi|425129125|ref|ZP_18530270.1| protein pmbA [Escherichia coli 8.0586]
gi|425134863|ref|ZP_18535690.1| protein pmbA [Escherichia coli 8.2524]
gi|425135349|ref|ZP_18536118.1| protein pmbA [Escherichia coli 10.0833]
gi|425147139|ref|ZP_18547105.1| protein pmbA [Escherichia coli 10.0869]
gi|425147577|ref|ZP_18547514.1| protein pmbA [Escherichia coli 88.0221]
gi|425159149|ref|ZP_18558387.1| protein pmbA [Escherichia coli PA34]
gi|425159604|ref|ZP_18558814.1| protein pmbA [Escherichia coli FDA506]
gi|425171205|ref|ZP_18569657.1| protein pmbA [Escherichia coli FDA507]
gi|425177245|ref|ZP_18575342.1| protein pmbA [Escherichia coli FDA504]
gi|425183323|ref|ZP_18580993.1| protein pmbA [Escherichia coli FRIK1999]
gi|425189608|ref|ZP_18586857.1| protein pmbA [Escherichia coli FRIK1997]
gi|425190200|ref|ZP_18587359.1| protein pmbA [Escherichia coli NE1487]
gi|425202834|ref|ZP_18599015.1| protein pmbA [Escherichia coli NE037]
gi|425203199|ref|ZP_18599361.1| protein pmbA [Escherichia coli FRIK2001]
gi|425214985|ref|ZP_18610366.1| protein pmbA [Escherichia coli PA4]
gi|425221072|ref|ZP_18616013.1| protein pmbA [Escherichia coli PA23]
gi|425227728|ref|ZP_18622171.1| protein pmbA [Escherichia coli PA49]
gi|425233871|ref|ZP_18627888.1| protein pmbA [Escherichia coli PA45]
gi|425239798|ref|ZP_18633495.1| protein pmbA [Escherichia coli TT12B]
gi|425240101|ref|ZP_18633771.1| protein pmbA [Escherichia coli MA6]
gi|425246201|ref|ZP_18639440.1| protein pmbA [Escherichia coli 5905]
gi|425258045|ref|ZP_18650513.1| protein pmbA [Escherichia coli CB7326]
gi|425264297|ref|ZP_18656260.1| protein pmbA [Escherichia coli EC96038]
gi|425270310|ref|ZP_18661909.1| protein pmbA [Escherichia coli 5412]
gi|425275618|ref|ZP_18666988.1| protein pmbA [Escherichia coli TW15901]
gi|425286131|ref|ZP_18677135.1| protein pmbA [Escherichia coli TW00353]
gi|425291460|ref|ZP_18682258.1| protein pmbA [Escherichia coli 3006]
gi|425297770|ref|ZP_18687859.1| protein pmbA [Escherichia coli PA38]
gi|425314502|ref|ZP_18703643.1| protein pmbA [Escherichia coli EC1735]
gi|425320436|ref|ZP_18709189.1| protein pmbA [Escherichia coli EC1736]
gi|425326624|ref|ZP_18714920.1| protein pmbA [Escherichia coli EC1737]
gi|425332854|ref|ZP_18720637.1| protein pmbA [Escherichia coli EC1846]
gi|425336946|ref|ZP_18724328.1| protein pmbA [Escherichia coli EC1847]
gi|425339367|ref|ZP_18726648.1| protein pmbA [Escherichia coli EC1848]
gi|425351202|ref|ZP_18737635.1| protein pmbA [Escherichia coli EC1849]
gi|425357470|ref|ZP_18743507.1| protein pmbA [Escherichia coli EC1850]
gi|425363431|ref|ZP_18749053.1| protein pmbA [Escherichia coli EC1856]
gi|425369692|ref|ZP_18754736.1| protein pmbA [Escherichia coli EC1862]
gi|425375998|ref|ZP_18760608.1| protein pmbA [Escherichia coli EC1864]
gi|425382719|ref|ZP_18766679.1| protein pmbA [Escherichia coli EC1865]
gi|425388839|ref|ZP_18772374.1| protein pmbA [Escherichia coli EC1866]
gi|425395607|ref|ZP_18778689.1| protein pmbA [Escherichia coli EC1868]
gi|425401665|ref|ZP_18784346.1| protein pmbA [Escherichia coli EC1869]
gi|425407766|ref|ZP_18789959.1| protein pmbA [Escherichia coli EC1870]
gi|425414099|ref|ZP_18795836.1| protein pmbA [Escherichia coli NE098]
gi|425420422|ref|ZP_18801670.1| protein pmbA [Escherichia coli FRIK523]
gi|425425297|ref|ZP_18806434.1| protein pmbA [Escherichia coli 0.1288]
gi|425431718|ref|ZP_18812302.1| protein pmbA [Escherichia coli 0.1304]
gi|428950140|ref|ZP_19022384.1| protein pmbA [Escherichia coli 88.1467]
gi|428956151|ref|ZP_19027917.1| protein pmbA [Escherichia coli 88.1042]
gi|428962246|ref|ZP_19033498.1| protein pmbA [Escherichia coli 89.0511]
gi|428962578|ref|ZP_19033800.1| protein pmbA [Escherichia coli 90.0091]
gi|428974561|ref|ZP_19044844.1| protein pmbA [Escherichia coli 90.0039]
gi|428981018|ref|ZP_19050793.1| protein pmbA [Escherichia coli 90.2281]
gi|428986749|ref|ZP_19056112.1| protein pmbA [Escherichia coli 93.0055]
gi|428992908|ref|ZP_19061871.1| protein pmbA [Escherichia coli 93.0056]
gi|428998801|ref|ZP_19067367.1| protein pmbA [Escherichia coli 94.0618]
gi|429005269|ref|ZP_19073300.1| protein pmbA [Escherichia coli 95.0183]
gi|429011297|ref|ZP_19078650.1| protein pmbA [Escherichia coli 95.1288]
gi|429017657|ref|ZP_19084509.1| protein pmbA [Escherichia coli 95.0943]
gi|429023530|ref|ZP_19090019.1| protein pmbA [Escherichia coli 96.0428]
gi|429029616|ref|ZP_19095562.1| protein pmbA [Escherichia coli 96.0427]
gi|429035781|ref|ZP_19101274.1| protein pmbA [Escherichia coli 96.0939]
gi|429036003|ref|ZP_19101485.1| protein pmbA [Escherichia coli 96.0932]
gi|429047708|ref|ZP_19112393.1| protein pmbA [Escherichia coli 96.0107]
gi|429053085|ref|ZP_19117635.1| protein pmbA [Escherichia coli 97.0003]
gi|429058641|ref|ZP_19122852.1| protein pmbA [Escherichia coli 97.1742]
gi|429064151|ref|ZP_19128081.1| protein pmbA [Escherichia coli 97.0007]
gi|429070396|ref|ZP_19133801.1| protein pmbA [Escherichia coli 99.0672]
gi|429070875|ref|ZP_19134243.1| protein pmbA [Escherichia coli 99.0678]
gi|429081337|ref|ZP_19144455.1| protein pmbA [Escherichia coli 99.0713]
gi|429829536|ref|ZP_19360501.1| protein pmbA [Escherichia coli 96.0109]
gi|429836010|ref|ZP_19366215.1| protein pmbA [Escherichia coli 97.0010]
gi|443615756|ref|YP_007379612.1| peptidase PmbA [Escherichia coli APEC O78]
gi|444928034|ref|ZP_21247273.1| protein pmbA [Escherichia coli 09BKT078844]
gi|444933659|ref|ZP_21252644.1| protein pmbA [Escherichia coli 99.0814]
gi|444939093|ref|ZP_21257798.1| protein pmbA [Escherichia coli 99.0815]
gi|444944722|ref|ZP_21263187.1| protein pmbA [Escherichia coli 99.0816]
gi|444950159|ref|ZP_21268433.1| protein pmbA [Escherichia coli 99.0839]
gi|444955753|ref|ZP_21273797.1| protein pmbA [Escherichia coli 99.0848]
gi|444961202|ref|ZP_21278998.1| protein pmbA [Escherichia coli 99.1753]
gi|444966440|ref|ZP_21283976.1| protein pmbA [Escherichia coli 99.1775]
gi|444972511|ref|ZP_21289831.1| protein pmbA [Escherichia coli 99.1793]
gi|444977752|ref|ZP_21294797.1| protein pmbA [Escherichia coli 99.1805]
gi|444983143|ref|ZP_21300029.1| protein pmbA [Escherichia coli ATCC 700728]
gi|444988489|ref|ZP_21305248.1| protein pmbA [Escherichia coli PA11]
gi|444993884|ref|ZP_21310507.1| protein pmbA [Escherichia coli PA19]
gi|444999068|ref|ZP_21315551.1| protein pmbA [Escherichia coli PA13]
gi|445004625|ref|ZP_21320997.1| protein pmbA [Escherichia coli PA2]
gi|445010071|ref|ZP_21326281.1| protein pmbA [Escherichia coli PA47]
gi|445015144|ref|ZP_21331231.1| protein pmbA [Escherichia coli PA48]
gi|445021004|ref|ZP_21336950.1| protein pmbA [Escherichia coli PA8]
gi|445026440|ref|ZP_21342244.1| protein pmbA [Escherichia coli 7.1982]
gi|445031834|ref|ZP_21347481.1| protein pmbA [Escherichia coli 99.1781]
gi|445037294|ref|ZP_21352800.1| protein pmbA [Escherichia coli 99.1762]
gi|445037685|ref|ZP_21353168.1| protein pmbA [Escherichia coli PA35]
gi|445048126|ref|ZP_21363358.1| protein pmbA [Escherichia coli 3.4880]
gi|445053706|ref|ZP_21368700.1| protein pmbA [Escherichia coli 95.0083]
gi|445061693|ref|ZP_21374194.1| protein pmbA [Escherichia coli 99.0670]
gi|450197413|ref|ZP_21893050.1| peptidase PmbA [Escherichia coli SEPT362]
gi|450230434|ref|ZP_21898017.1| peptidase PmbA [Escherichia coli O08]
gi|450254893|ref|ZP_21902716.1| peptidase PmbA [Escherichia coli S17]
gi|452970288|ref|ZP_21968515.1| peptidase PmbA [Escherichia coli O157:H7 str. EC4009]
gi|157069389|gb|ABV08644.1| protein PmbA [Escherichia coli HS]
gi|157081322|gb|ABV21030.1| protein PmbA [Escherichia coli E24377A]
gi|187430956|gb|ACD10230.1| protein PmbA [Shigella boydii CDC 3083-94]
gi|188014809|gb|EDU52931.1| protein PmbA [Escherichia coli O157:H7 str. EC4113]
gi|189357878|gb|EDU76297.1| protein PmbA [Escherichia coli O157:H7 str. EC4401]
gi|189364121|gb|EDU82540.1| protein PmbA [Escherichia coli O157:H7 str. EC4486]
gi|208727591|gb|EDZ77192.1| protein PmbA [Escherichia coli O157:H7 str. EC4206]
gi|209157510|gb|ACI34943.1| protein PmbA [Escherichia coli O157:H7 str. EC4115]
gi|217322030|gb|EEC30454.1| protein PmbA [Escherichia coli O157:H7 str. TW14588]
gi|291429775|gb|EFF02789.1| peptidase PmbA [Escherichia coli FVEC1412]
gi|291472210|gb|EFF14692.1| peptidase PmbA [Escherichia coli B354]
gi|298280722|gb|EFI22223.1| peptidase PmbA [Escherichia coli FVEC1302]
gi|299878840|gb|EFI87051.1| TldD/PmbA family protein [Escherichia coli MS 196-1]
gi|320175805|gb|EFW50889.1| peptidase PmbA [Shigella dysenteriae CDC 74-1112]
gi|320177640|gb|EFW52630.1| peptidase PmbA [Shigella boydii ATCC 9905]
gi|320190633|gb|EFW65283.1| peptidase PmbA [Escherichia coli O157:H7 str. EC1212]
gi|320193648|gb|EFW68283.1| peptidase PmbA [Escherichia coli WV_060327]
gi|320644363|gb|EFX13428.1| peptidase PmbA [Escherichia coli O157:H- str. 493-89]
gi|320649681|gb|EFX18205.1| peptidase PmbA [Escherichia coli O157:H- str. H 2687]
gi|320655077|gb|EFX23038.1| peptidase PmbA [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320660584|gb|EFX28045.1| peptidase PmbA [Escherichia coli O55:H7 str. USDA 5905]
gi|323935360|gb|EGB31708.1| PmbA protein [Escherichia coli E1520]
gi|323940155|gb|EGB36349.1| PmbA protein [Escherichia coli E482]
gi|326346709|gb|EGD70443.1| peptidase PmbA [Escherichia coli O157:H7 str. 1044]
gi|331056955|gb|EGI28949.1| protein PmbA [Escherichia coli TA143]
gi|331081479|gb|EGI52640.1| protein PmbA [Escherichia coli H299]
gi|333972501|gb|AEG39306.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Escherichia coli NA114]
gi|338767513|gb|EGP22331.1| putative peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Escherichia coli PCN033]
gi|340731694|gb|EGR60836.1| peptidase PmbA [Escherichia coli O104:H4 str. 01-09591]
gi|340737496|gb|EGR71755.1| peptidase PmbA [Escherichia coli O104:H4 str. LB226692]
gi|342363743|gb|EGU27848.1| peptidase PmbA [Escherichia coli XH140A]
gi|344194080|gb|EGV48156.1| peptidase PmbA [Escherichia coli XH001]
gi|345345498|gb|EGW77836.1| modulator of DNA gyrase family protein [Escherichia coli STEC_94C]
gi|345346776|gb|EGW79095.1| modulator of DNA gyrase family protein [Escherichia coli 3030-1]
gi|345355800|gb|EGW88008.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_EH250]
gi|345368614|gb|EGX00612.1| modulator of DNA gyrase family protein [Escherichia coli G58-1]
gi|374361687|gb|AEZ43394.1| peptidase PmbA [Escherichia coli O55:H7 str. RM12579]
gi|377837767|gb|EHU02894.1| modulator of DNA gyrase family protein [Escherichia coli DEC1C]
gi|377837969|gb|EHU03095.1| modulator of DNA gyrase family protein [Escherichia coli DEC1A]
gi|377840120|gb|EHU05196.1| modulator of DNA gyrase family protein [Escherichia coli DEC1B]
gi|377854989|gb|EHU19865.1| modulator of DNA gyrase family protein [Escherichia coli DEC1E]
gi|377856255|gb|EHU21116.1| protein pmbA [Escherichia coli DEC2A]
gi|377869523|gb|EHU34239.1| modulator of DNA gyrase family protein [Escherichia coli DEC2B]
gi|377870746|gb|EHU35420.1| modulator of DNA gyrase family protein [Escherichia coli DEC2C]
gi|377872848|gb|EHU37490.1| modulator of DNA gyrase family protein [Escherichia coli DEC2D]
gi|377884468|gb|EHU48980.1| modulator of DNA gyrase family protein [Escherichia coli DEC2E]
gi|377887394|gb|EHU51871.1| modulator of DNA gyrase family protein [Escherichia coli DEC3A]
gi|377888505|gb|EHU52976.1| modulator of DNA gyrase family protein [Escherichia coli DEC3B]
gi|377904361|gb|EHU68647.1| modulator of DNA gyrase family protein [Escherichia coli DEC3D]
gi|377906044|gb|EHU70303.1| modulator of DNA gyrase family protein [Escherichia coli DEC3E]
gi|377915096|gb|EHU79205.1| modulator of DNA gyrase family protein [Escherichia coli DEC3C]
gi|377922020|gb|EHU86012.1| modulator of DNA gyrase family protein [Escherichia coli DEC4A]
gi|377925514|gb|EHU89454.1| modulator of DNA gyrase family protein [Escherichia coli DEC4B]
gi|377933789|gb|EHU97633.1| modulator of DNA gyrase family protein [Escherichia coli DEC3F]
gi|377935854|gb|EHU99648.1| modulator of DNA gyrase family protein [Escherichia coli DEC4D]
gi|377936649|gb|EHV00443.1| modulator of DNA gyrase family protein [Escherichia coli DEC4C]
gi|377942354|gb|EHV06088.1| modulator of DNA gyrase family protein [Escherichia coli DEC4E]
gi|377952942|gb|EHV16523.1| modulator of DNA gyrase family protein [Escherichia coli DEC4F]
gi|377955654|gb|EHV19209.1| modulator of DNA gyrase family protein [Escherichia coli DEC5A]
gi|377960866|gb|EHV24345.1| modulator of DNA gyrase family protein [Escherichia coli DEC5B]
gi|377968393|gb|EHV31787.1| modulator of DNA gyrase family protein [Escherichia coli DEC5C]
gi|377978513|gb|EHV41792.1| protein pmbA [Escherichia coli DEC5E]
gi|377983293|gb|EHV46537.1| modulator of DNA gyrase family protein [Escherichia coli DEC5D]
gi|377990064|gb|EHV53227.1| protein pmbA [Escherichia coli DEC6C]
gi|378002767|gb|EHV65817.1| protein pmbA [Escherichia coli DEC6D]
gi|378004886|gb|EHV67895.1| modulator of DNA gyrase family protein [Escherichia coli DEC6E]
gi|378040620|gb|EHW03084.1| protein pmbA [Escherichia coli DEC8A]
gi|378041402|gb|EHW03864.1| modulator of DNA gyrase family protein [Escherichia coli DEC8B]
gi|378045989|gb|EHW08370.1| modulator of DNA gyrase family protein [Escherichia coli DEC8C]
gi|378056291|gb|EHW18535.1| modulator of DNA gyrase family protein [Escherichia coli DEC8D]
gi|378059062|gb|EHW21267.1| modulator of DNA gyrase family protein [Escherichia coli DEC8E]
gi|378066403|gb|EHW28539.1| modulator of DNA gyrase family protein [Escherichia coli DEC9A]
gi|378071705|gb|EHW33773.1| modulator of DNA gyrase family protein [Escherichia coli DEC9B]
gi|378077287|gb|EHW39282.1| modulator of DNA gyrase family protein [Escherichia coli DEC9C]
gi|378085718|gb|EHW47605.1| modulator of DNA gyrase family protein [Escherichia coli DEC9D]
gi|378087322|gb|EHW49183.1| modulator of DNA gyrase family protein [Escherichia coli DEC9E]
gi|378094759|gb|EHW56551.1| modulator of DNA gyrase family protein [Escherichia coli DEC10A]
gi|378099880|gb|EHW61578.1| modulator of DNA gyrase family protein [Escherichia coli DEC10B]
gi|378106057|gb|EHW67693.1| modulator of DNA gyrase family protein [Escherichia coli DEC10C]
gi|378111323|gb|EHW72908.1| modulator of DNA gyrase family protein [Escherichia coli DEC10D]
gi|378122616|gb|EHW84044.1| modulator of DNA gyrase family protein [Escherichia coli DEC10E]
gi|378141058|gb|EHX02275.1| modulator of DNA gyrase family protein [Escherichia coli DEC10F]
gi|378191540|gb|EHX52115.1| modulator of DNA gyrase family protein [Escherichia coli DEC13A]
gi|378194008|gb|EHX54529.1| modulator of DNA gyrase family protein [Escherichia coli DEC13C]
gi|378194538|gb|EHX55050.1| modulator of DNA gyrase family protein [Escherichia coli DEC13B]
gi|378196387|gb|EHX56874.1| modulator of DNA gyrase family protein [Escherichia coli DEC13D]
gi|378207408|gb|EHX67801.1| modulator of DNA gyrase family protein [Escherichia coli DEC13E]
gi|378212645|gb|EHX72967.1| modulator of DNA gyrase family protein [Escherichia coli DEC14B]
gi|378222632|gb|EHX82868.1| modulator of DNA gyrase family protein [Escherichia coli DEC14C]
gi|378225675|gb|EHX85872.1| modulator of DNA gyrase family protein [Escherichia coli DEC14D]
gi|378231864|gb|EHX91968.1| modulator of DNA gyrase family protein [Escherichia coli DEC15A]
gi|378238862|gb|EHX98856.1| modulator of DNA gyrase family protein [Escherichia coli DEC15B]
gi|378241715|gb|EHY01681.1| modulator of DNA gyrase family protein [Escherichia coli DEC15C]
gi|378249581|gb|EHY09490.1| modulator of DNA gyrase family protein [Escherichia coli DEC15D]
gi|378253744|gb|EHY13609.1| modulator of DNA gyrase family protein [Escherichia coli DEC15E]
gi|383105643|gb|AFG43152.1| peptidase PmbA [Escherichia coli P12b]
gi|385156706|gb|EIF18701.1| peptidase PmbA [Escherichia coli O32:H37 str. P4]
gi|386156742|gb|EIH13085.1| protein PmbA [Escherichia coli 97.0259]
gi|386191477|gb|EIH80221.1| protein PmbA [Escherichia coli 4.0522]
gi|386234157|gb|EII66137.1| protein PmbA [Escherichia coli 2.4168]
gi|386238288|gb|EII75225.1| protein PmbA [Escherichia coli 3.2303]
gi|386251832|gb|EIJ01524.1| protein PmbA [Escherichia coli B41]
gi|388351489|gb|EIL16720.1| peptidase PmbA [Escherichia coli O111:H11 str. CVM9534]
gi|388357692|gb|EIL22228.1| peptidase PmbA [Escherichia coli O111:H11 str. CVM9545]
gi|388362756|gb|EIL26730.1| peptidase PmbA [Escherichia coli O111:H8 str. CVM9570]
gi|388363270|gb|EIL27205.1| peptidase PmbA [Escherichia coli O111:H8 str. CVM9574]
gi|388369322|gb|EIL32934.1| peptidase PmbA [Escherichia coli O26:H11 str. CVM9942]
gi|388372265|gb|EIL35702.1| peptidase U62 modulator of DNA gyrase [Escherichia coli O26:H11
str. CVM10026]
gi|388404056|gb|EIL64550.1| peptidase PmbA [Escherichia coli 576-1]
gi|388410435|gb|EIL70661.1| peptidase PmbA [Escherichia coli 75]
gi|388415323|gb|EIL75255.1| peptidase PmbA [Escherichia coli CUMT8]
gi|388422329|gb|EIL81912.1| peptidase PmbA [Escherichia coli HM605]
gi|390636302|gb|EIN15892.1| protein pmbA [Escherichia coli FRIK1996]
gi|390636533|gb|EIN16112.1| protein pmbA [Escherichia coli FDA505]
gi|390637337|gb|EIN16888.1| protein pmbA [Escherichia coli FDA517]
gi|390655168|gb|EIN33137.1| protein pmbA [Escherichia coli FRIK1985]
gi|390656079|gb|EIN33976.1| protein pmbA [Escherichia coli 93-001]
gi|390657617|gb|EIN35430.1| protein pmbA [Escherichia coli FRIK1990]
gi|390672962|gb|EIN49217.1| protein pmbA [Escherichia coli PA3]
gi|390676500|gb|EIN52599.1| protein pmbA [Escherichia coli PA5]
gi|390679892|gb|EIN55757.1| protein pmbA [Escherichia coli PA9]
gi|390690937|gb|EIN65716.1| protein pmbA [Escherichia coli PA10]
gi|390695345|gb|EIN69882.1| protein pmbA [Escherichia coli PA14]
gi|390696597|gb|EIN71047.1| protein pmbA [Escherichia coli PA15]
gi|390715415|gb|EIN88261.1| protein pmbA [Escherichia coli PA24]
gi|390716980|gb|EIN89772.1| protein pmbA [Escherichia coli PA25]
gi|390721829|gb|EIN94523.1| protein pmbA [Escherichia coli PA22]
gi|390723342|gb|EIN95943.1| protein pmbA [Escherichia coli PA28]
gi|390735737|gb|EIO07109.1| protein pmbA [Escherichia coli PA31]
gi|390736172|gb|EIO07515.1| protein pmbA [Escherichia coli PA32]
gi|390740239|gb|EIO11387.1| protein pmbA [Escherichia coli PA33]
gi|390755522|gb|EIO25060.1| protein pmbA [Escherichia coli PA39]
gi|390760602|gb|EIO29920.1| protein pmbA [Escherichia coli PA41]
gi|390763091|gb|EIO32340.1| protein pmbA [Escherichia coli PA40]
gi|390763837|gb|EIO33063.1| protein pmbA [Escherichia coli PA42]
gi|390778480|gb|EIO46238.1| protein pmbA [Escherichia coli TW06591]
gi|390784188|gb|EIO51762.1| protein pmbA [Escherichia coli TW07945]
gi|390792521|gb|EIO59875.1| protein pmbA [Escherichia coli TW11039]
gi|390796254|gb|EIO63530.1| protein pmbA [Escherichia coli TW10246]
gi|390798893|gb|EIO66076.1| protein pmbA [Escherichia coli TW09098]
gi|390812377|gb|EIO79053.1| protein pmbA [Escherichia coli TW09109]
gi|390819947|gb|EIO86253.1| protein pmbA [Escherichia coli TW10119]
gi|390820582|gb|EIO86868.1| protein pmbA [Escherichia coli TW09195]
gi|390821485|gb|EIO87671.1| protein pmbA [Escherichia coli EC4203]
gi|390826718|gb|EIO92543.1| protein pmbA [Escherichia coli EC4196]
gi|390839375|gb|EIP03485.1| protein pmbA [Escherichia coli TW14313]
gi|390841871|gb|EIP05755.1| protein pmbA [Escherichia coli TW14301]
gi|390847035|gb|EIP10594.1| protein pmbA [Escherichia coli EC4421]
gi|390857457|gb|EIP19890.1| protein pmbA [Escherichia coli EC4422]
gi|390865319|gb|EIP27336.1| protein pmbA [Escherichia coli EC4402]
gi|390874270|gb|EIP35413.1| protein pmbA [Escherichia coli EC4439]
gi|390877920|gb|EIP38809.1| protein pmbA [Escherichia coli EC4013]
gi|390879650|gb|EIP40394.1| protein pmbA [Escherichia coli EC4436]
gi|390889349|gb|EIP49094.1| protein pmbA [Escherichia coli EC4437]
gi|390890406|gb|EIP50078.1| protein pmbA [Escherichia coli EC4448]
gi|390904322|gb|EIP63318.1| protein pmbA [Escherichia coli EC1738]
gi|390905099|gb|EIP64050.1| protein pmbA [Escherichia coli EC1734]
gi|390913828|gb|EIP72390.1| protein pmbA [Escherichia coli EC1845]
gi|390914651|gb|EIP73187.1| protein pmbA [Escherichia coli EC1863]
gi|391256827|gb|EIQ15950.1| protein pmbA [Shigella flexneri K-315]
gi|391297425|gb|EIQ55478.1| protein pmbA [Shigella dysenteriae 225-75]
gi|394383802|gb|EJE61386.1| peptidase PmbA [Escherichia coli O26:H11 str. CVM10224]
gi|394390430|gb|EJE67435.1| peptidase PmbA [Escherichia coli O111:H8 str. CVM9602]
gi|394399023|gb|EJE75118.1| peptidase PmbA [Escherichia coli O111:H8 str. CVM9634]
gi|394402567|gb|EJE78277.1| peptidase PmbA [Escherichia coli O26:H11 str. CVM10021]
gi|394403393|gb|EJE78992.1| peptidase PmbA [Escherichia coli O111:H11 str. CVM9553]
gi|394406540|gb|EJE81531.1| peptidase PmbA [Escherichia coli O111:H11 str. CVM9455]
gi|394430195|gb|EJF02547.1| peptidase PmbA [Escherichia coli O26:H11 str. CVM10030]
gi|394433223|gb|EJF05270.1| peptidase PmbA [Escherichia coli O26:H11 str. CVM9952]
gi|406779704|gb|AFS59128.1| peptidase PmbA [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407056296|gb|AFS76347.1| peptidase PmbA [Escherichia coli O104:H4 str. 2011C-3493]
gi|407063317|gb|AFS84364.1| peptidase PmbA [Escherichia coli O104:H4 str. 2009EL-2071]
gi|408061911|gb|EKG96419.1| protein pmbA [Escherichia coli FRIK920]
gi|408062552|gb|EKG97056.1| protein pmbA [Escherichia coli PA34]
gi|408073321|gb|EKH07630.1| protein pmbA [Escherichia coli PA7]
gi|408079451|gb|EKH13569.1| protein pmbA [Escherichia coli FDA507]
gi|408087764|gb|EKH21177.1| protein pmbA [Escherichia coli FDA504]
gi|408092387|gb|EKH25577.1| protein pmbA [Escherichia coli FDA506]
gi|408093748|gb|EKH26809.1| protein pmbA [Escherichia coli FRIK1999]
gi|408100210|gb|EKH32729.1| protein pmbA [Escherichia coli FRIK1997]
gi|408111855|gb|EKH43555.1| protein pmbA [Escherichia coli NE037]
gi|408122821|gb|EKH53623.1| protein pmbA [Escherichia coli NE1487]
gi|408124377|gb|EKH55047.1| protein pmbA [Escherichia coli PA4]
gi|408133202|gb|EKH63113.1| protein pmbA [Escherichia coli FRIK2001]
gi|408134230|gb|EKH64070.1| protein pmbA [Escherichia coli PA23]
gi|408135660|gb|EKH65432.1| protein pmbA [Escherichia coli PA49]
gi|408143190|gb|EKH72506.1| protein pmbA [Escherichia coli PA45]
gi|408151485|gb|EKH79987.1| protein pmbA [Escherichia coli TT12B]
gi|408169540|gb|EKH96800.1| protein pmbA [Escherichia coli CB7326]
gi|408174223|gb|EKI01208.1| protein pmbA [Escherichia coli MA6]
gi|408175799|gb|EKI02691.1| protein pmbA [Escherichia coli 5905]
gi|408176241|gb|EKI03108.1| protein pmbA [Escherichia coli EC96038]
gi|408179348|gb|EKI06021.1| protein pmbA [Escherichia coli 5412]
gi|408188884|gb|EKI14662.1| protein pmbA [Escherichia coli TW15901]
gi|408196496|gb|EKI21776.1| protein pmbA [Escherichia coli TW00353]
gi|408208177|gb|EKI32842.1| protein pmbA [Escherichia coli 3006]
gi|408208840|gb|EKI33459.1| protein pmbA [Escherichia coli PA38]
gi|408222919|gb|EKI46727.1| protein pmbA [Escherichia coli EC1735]
gi|408234158|gb|EKI57192.1| protein pmbA [Escherichia coli EC1736]
gi|408236402|gb|EKI59301.1| protein pmbA [Escherichia coli EC1737]
gi|408242294|gb|EKI64887.1| protein pmbA [Escherichia coli EC1846]
gi|408255291|gb|EKI76743.1| protein pmbA [Escherichia coli EC1847]
gi|408261889|gb|EKI82846.1| protein pmbA [Escherichia coli EC1849]
gi|408270478|gb|EKI90664.1| protein pmbA [Escherichia coli EC1850]
gi|408271704|gb|EKI91825.1| protein pmbA [Escherichia coli EC1848]
gi|408272839|gb|EKI92906.1| protein pmbA [Escherichia coli EC1856]
gi|408281518|gb|EKJ00929.1| protein pmbA [Escherichia coli EC1862]
gi|408287364|gb|EKJ06237.1| protein pmbA [Escherichia coli EC1864]
gi|408292314|gb|EKJ10870.1| protein pmbA [Escherichia coli EC1865]
gi|408302732|gb|EKJ20236.1| protein pmbA [Escherichia coli EC1868]
gi|408303567|gb|EKJ21025.1| protein pmbA [Escherichia coli EC1866]
gi|408314994|gb|EKJ31342.1| protein pmbA [Escherichia coli EC1869]
gi|408320588|gb|EKJ36681.1| protein pmbA [Escherichia coli EC1870]
gi|408321912|gb|EKJ37915.1| protein pmbA [Escherichia coli NE098]
gi|408333336|gb|EKJ48298.1| protein pmbA [Escherichia coli FRIK523]
gi|408339938|gb|EKJ54461.1| protein pmbA [Escherichia coli 0.1288]
gi|408340641|gb|EKJ55123.1| protein pmbA [Escherichia coli 0.1304]
gi|408543795|gb|EKK21279.1| protein pmbA [Escherichia coli 5.2239]
gi|408544243|gb|EKK21703.1| protein pmbA [Escherichia coli 3.4870]
gi|408544610|gb|EKK22060.1| protein pmbA [Escherichia coli 6.0172]
gi|408562110|gb|EKK38283.1| protein pmbA [Escherichia coli 8.0566]
gi|408562176|gb|EKK38345.1| protein pmbA [Escherichia coli 8.0586]
gi|408563115|gb|EKK39256.1| protein pmbA [Escherichia coli 8.0569]
gi|408577068|gb|EKK52649.1| protein pmbA [Escherichia coli 8.2524]
gi|408587602|gb|EKK62246.1| protein pmbA [Escherichia coli 10.0869]
gi|408593584|gb|EKK67892.1| protein pmbA [Escherichia coli 10.0833]
gi|408597758|gb|EKK71728.1| protein pmbA [Escherichia coli 8.0416]
gi|408607104|gb|EKK80516.1| protein pmbA [Escherichia coli 10.0821]
gi|408614342|gb|EKK87621.1| protein pmbA [Escherichia coli 88.0221]
gi|421940550|gb|EKT98001.1| peptidase PmbA [Escherichia coli O26:H11 str. CFSAN001629]
gi|421944486|gb|EKU01739.1| peptidase PmbA [Escherichia coli O111:H8 str. CFSAN001632]
gi|421950217|gb|EKU07101.1| peptidase PmbA [Escherichia coli O111:H11 str. CFSAN001630]
gi|427200357|gb|EKV70785.1| protein pmbA [Escherichia coli 89.0511]
gi|427200496|gb|EKV70915.1| protein pmbA [Escherichia coli 88.1042]
gi|427202941|gb|EKV73248.1| protein pmbA [Escherichia coli 88.1467]
gi|427220698|gb|EKV89609.1| protein pmbA [Escherichia coli 90.2281]
gi|427222960|gb|EKV91720.1| protein pmbA [Escherichia coli 90.0039]
gi|427236847|gb|EKW04403.1| protein pmbA [Escherichia coli 93.0056]
gi|427236899|gb|EKW04454.1| protein pmbA [Escherichia coli 93.0055]
gi|427238206|gb|EKW05724.1| protein pmbA [Escherichia coli 90.0091]
gi|427241281|gb|EKW08722.1| protein pmbA [Escherichia coli 94.0618]
gi|427254847|gb|EKW21139.1| protein pmbA [Escherichia coli 95.0183]
gi|427256290|gb|EKW22482.1| protein pmbA [Escherichia coli 95.1288]
gi|427256659|gb|EKW22816.1| protein pmbA [Escherichia coli 95.0943]
gi|427272442|gb|EKW37183.1| protein pmbA [Escherichia coli 96.0428]
gi|427273644|gb|EKW38319.1| protein pmbA [Escherichia coli 96.0427]
gi|427279439|gb|EKW43851.1| protein pmbA [Escherichia coli 96.0939]
gi|427295232|gb|EKW58359.1| protein pmbA [Escherichia coli 96.0107]
gi|427296355|gb|EKW59410.1| protein pmbA [Escherichia coli 97.0003]
gi|427306444|gb|EKW68968.1| protein pmbA [Escherichia coli 97.1742]
gi|427308219|gb|EKW70630.1| protein pmbA [Escherichia coli 96.0932]
gi|427309331|gb|EKW71650.1| protein pmbA [Escherichia coli 97.0007]
gi|427314395|gb|EKW76449.1| protein pmbA [Escherichia coli 99.0672]
gi|427325105|gb|EKW86555.1| protein pmbA [Escherichia coli 99.0713]
gi|427335581|gb|EKW96610.1| protein pmbA [Escherichia coli 99.0678]
gi|429250000|gb|EKY34678.1| protein pmbA [Escherichia coli 96.0109]
gi|429250166|gb|EKY34832.1| protein pmbA [Escherichia coli 97.0010]
gi|443420264|gb|AGC85168.1| peptidase PmbA [Escherichia coli APEC O78]
gi|444534338|gb|ELV14586.1| protein pmbA [Escherichia coli 99.0814]
gi|444535302|gb|ELV15397.1| protein pmbA [Escherichia coli 09BKT078844]
gi|444544650|gb|ELV23680.1| protein pmbA [Escherichia coli 99.0815]
gi|444553306|gb|ELV30931.1| protein pmbA [Escherichia coli 99.0816]
gi|444553707|gb|ELV31310.1| protein pmbA [Escherichia coli 99.0839]
gi|444558301|gb|ELV35598.1| protein pmbA [Escherichia coli 99.0848]
gi|444567872|gb|ELV44592.1| protein pmbA [Escherichia coli 99.1753]
gi|444570907|gb|ELV47411.1| protein pmbA [Escherichia coli 99.1775]
gi|444574693|gb|ELV50964.1| protein pmbA [Escherichia coli 99.1793]
gi|444586685|gb|ELV62174.1| protein pmbA [Escherichia coli 99.1805]
gi|444588009|gb|ELV63406.1| protein pmbA [Escherichia coli ATCC 700728]
gi|444588534|gb|ELV63910.1| protein pmbA [Escherichia coli PA11]
gi|444601913|gb|ELV76669.1| protein pmbA [Escherichia coli PA19]
gi|444602281|gb|ELV77030.1| protein pmbA [Escherichia coli PA13]
gi|444611451|gb|ELV85786.1| protein pmbA [Escherichia coli PA2]
gi|444617656|gb|ELV91766.1| protein pmbA [Escherichia coli PA47]
gi|444619250|gb|ELV93300.1| protein pmbA [Escherichia coli PA48]
gi|444625539|gb|ELV99366.1| protein pmbA [Escherichia coli PA8]
gi|444634243|gb|ELW07727.1| protein pmbA [Escherichia coli 7.1982]
gi|444635614|gb|ELW09033.1| protein pmbA [Escherichia coli 99.1781]
gi|444640673|gb|ELW13929.1| protein pmbA [Escherichia coli 99.1762]
gi|444656199|gb|ELW28730.1| protein pmbA [Escherichia coli 3.4880]
gi|444657900|gb|ELW30364.1| protein pmbA [Escherichia coli 95.0083]
gi|444664229|gb|ELW36417.1| protein pmbA [Escherichia coli PA35]
gi|444666002|gb|ELW38093.1| protein pmbA [Escherichia coli 99.0670]
gi|449312432|gb|EMD02693.1| peptidase PmbA [Escherichia coli O08]
gi|449312920|gb|EMD03155.1| peptidase PmbA [Escherichia coli S17]
gi|449314960|gb|EMD05117.1| peptidase PmbA [Escherichia coli SEPT362]
Length = 446
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|419145380|ref|ZP_13690100.1| protein pmbA [Escherichia coli DEC6A]
gi|419151381|ref|ZP_13696022.1| modulator of DNA gyrase family protein [Escherichia coli DEC6B]
gi|377987145|gb|EHV50333.1| modulator of DNA gyrase family protein [Escherichia coli DEC6B]
gi|377987877|gb|EHV51061.1| protein pmbA [Escherichia coli DEC6A]
Length = 446
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|417692788|ref|ZP_12341979.1| modulator of DNA gyrase family protein [Shigella boydii 5216-82]
gi|332083236|gb|EGI88467.1| modulator of DNA gyrase family protein [Shigella boydii 5216-82]
Length = 446
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFSNEVATGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|419864305|ref|ZP_14386777.1| peptidase PmbA [Escherichia coli O103:H25 str. CVM9340]
gi|388340645|gb|EIL06853.1| peptidase PmbA [Escherichia coli O103:H25 str. CVM9340]
Length = 446
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPADVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|422788091|ref|ZP_16840828.1| PmbA protein [Escherichia coli H489]
gi|323960278|gb|EGB55919.1| PmbA protein [Escherichia coli H489]
Length = 446
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPADVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLSEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|209921731|ref|YP_002295815.1| peptidase PmbA [Escherichia coli SE11]
gi|422352697|ref|ZP_16433470.1| TldD/PmbA family protein [Escherichia coli MS 117-3]
gi|422761543|ref|ZP_16815301.1| PmbA protein [Escherichia coli E1167]
gi|209914990|dbj|BAG80064.1| putative peptide maturation protein [Escherichia coli SE11]
gi|324019284|gb|EGB88503.1| TldD/PmbA family protein [Escherichia coli MS 117-3]
gi|324118797|gb|EGC12689.1| PmbA protein [Escherichia coli E1167]
Length = 450
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|383934771|ref|ZP_09988211.1| PmbA protein [Rheinheimera nanhaiensis E407-8]
gi|383704306|dbj|GAB58302.1| PmbA protein [Rheinheimera nanhaiensis E407-8]
Length = 448
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 168/442 (38%), Positives = 273/442 (61%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E +Q ++L +AK++GAS + + G SV R G+++ +E N D + + +Y
Sbjct: 14 EVKQAVAEVLAHAKQLGASSAEASMSRTKGLSVETRHGEVETVEFNQDGGLGISLYFGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++ST+D ++L T+ AA +IAR+T+ D G+ + + LE++P D LY P
Sbjct: 74 K----GSASTADLSPQALKRTVEAAADIARYTSEDPHTGIAEASWLELSPPDLDLYHPDS 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
+ ++A + R E AF +S I N+E ++ + NSHG + GYP S+H S
Sbjct: 130 IGTEEAIRLCARAEEAAFAADSRITNSEGASFSSHTGLKVYGNSHGQLVGYPSSRHSFSC 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
I +G++MQRD +S L P IG AA+ T++RL ++I+T+K PV+F A
Sbjct: 190 VVIGEEGEDMQRDYSFSVARRYNDLLDPAQIGREAAQETVARLNGRQIATQKVPVIFRAD 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
+A L ISG S+YRKS+FL+D +G ++ + + I+E PH+ + SS FD EGV
Sbjct: 250 IASSLFGHLVSAISGGSIYRKSSFLLDKVGLQVMAPGLTIVEQPHLRNALASSPFDGEGV 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
KT+ V++ G++ Y ++YSA+KLGM +TG++GG H+ ++ + ++L+++ + M
Sbjct: 310 KTRDLTVIEQGVLTTYLTTSYSARKLGMASTGHAGGIHNWLV----SHGDEDLRQLCRTM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA G+W+E+G+IQ+ V E+TI+G L+++F QI A+G+
Sbjct: 366 GKGLLVTELMGQGVNTVTGDYSRGAAGFWVEHGEIQFPVSEVTIAGNLKDIFMQIAAVGN 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R +GS+L+ M +AG
Sbjct: 426 DIDRRGGVLTGSVLVSQMQVAG 447
>gi|395232190|ref|ZP_10410441.1| peptidase PmbA [Enterobacter sp. Ag1]
gi|394733176|gb|EJF32804.1| peptidase PmbA [Enterobacter sp. Ag1]
Length = 446
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 173/455 (38%), Positives = 278/455 (61%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K ++ + +Q L AK + + + ++ G SV R G+++ +E N+D
Sbjct: 1 MKVNTQVAQQRQVLEQAVSQALELAKG-KSDGAEVAVSKTTGISVSTRYGEVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q+ K G++S++D ++ T+ AA +IAR+T+ D +AG+ D+ L
Sbjct: 60 GALGITVYHQNRK----GSASSTDLSPDAIARTVQAALDIARYTSPDPYAGVADKELLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
+ D L+ P + + A +A R EN + N + I N E + + NSHG +
Sbjct: 116 DAPDLDLFHPTEIDPERAIELAARAENASLNVDKRITNTEGGSFNSHYGIKVFGNSHGML 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y ++H +S IA + +M+RD Y+ + L PE +G A+RT+SRL +K+
Sbjct: 176 QSYCSTRHSLSSCVIAEENGDMERDYAYTIGRAMEDLKSPEWVGADCARRTLSRLSPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
ST K PV+F +A L I+G ++YRKSTFL+DSLGK+I + I E PH+L
Sbjct: 236 STMKAPVIFANEVATGLFGHLVGAIAGGAVYRKSTFLLDSLGKQILPDWLTIEEHPHLLK 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+T++R ++K+G++Q + L+ YSA+KLG+K+TG++GG H+ I
Sbjct: 296 GLASTPFDSEGVRTERRDIIKDGVLQQWLLTNYSARKLGLKSTGHAGGIHNWRIAGQGL- 354
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ +EMLK+M TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L
Sbjct: 355 ---SFEEMLKQMGTGLVVTELMGQGVSGITGDYSRGAAGFWVENGEIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M+++IV IG+D+ TR++ GS+L+ M IAG+
Sbjct: 412 KDMWREIVTIGNDIETRSNIQCGSVLLPEMKIAGQ 446
>gi|387771623|ref|ZP_10127781.1| protein PmbA [Haemophilus parahaemolyticus HK385]
gi|386908483|gb|EIJ73176.1| protein PmbA [Haemophilus parahaemolyticus HK385]
Length = 449
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 177/445 (39%), Positives = 278/445 (62%), Gaps = 8/445 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + LN+AKK GA + + + G SV R +++ IE NND ++ + +Y+
Sbjct: 13 EQELRQAVEFALNFAKKAGA-EAEVGVTKVAGLSVSSRLEQVENIEFNNDGSLGISVYL- 70
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
GK+ GN+STSD KS+ + +A IA+ T+ D+ AGL D+ + + D +LY
Sbjct: 71 -GKRK--GNASTSDLQSKSIQQAVESALAIAKHTSEDDCAGLADKELMAFDAPDLELYHQ 127
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
LS+D A +A EN A N + IVN+E + + N+HG + S++ +
Sbjct: 128 ADLSVDQALALAIETENAALNADEQIVNSEGATFNSHSGVRVYGNTHGMLQSNLSSRYSL 187
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S IA G++++RD Y+ + + KL P+ +G AA + + RL +KI T + PV++
Sbjct: 188 SCSVIAAHGEQLERDYEYTISREFDKLQAPQWVGQQAAFKAVDRLNPQKIKTCEVPVIYY 247
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L+ A ISG +LYRKS+FL+D LGK++ +I E PH+L S++FD+E
Sbjct: 248 NDVATGLIGHLAGAISGGALYRKSSFLLDHLGKQVLPDWFEISERPHLLRQLASTAFDSE 307
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV TQ R ++ +G++Q Y +++YSA+K+G+K+TG++GG H+ ++ N+ D L LK
Sbjct: 308 GVITQDREIITDGVLQTYLMTSYSARKMGLKSTGHAGGIHNWLVKPNRAGGLDTL---LK 364
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M+TGLL+TE +G IN +TG+YS+GA G+W+E GKIQY V EIT++G+LQ MF IVA+
Sbjct: 365 EMDTGLLLTEFLGSAINPVTGEYSRGAAGFWVEKGKIQYPVAEITVAGQLQEMFNNIVAV 424
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
DV R++ +GSILIE M I+G+
Sbjct: 425 ADDVEHRSNIQTGSILIEKMKISGE 449
>gi|374334646|ref|YP_005091333.1| protein PmbA [Oceanimonas sp. GK1]
gi|372984333|gb|AEY00583.1| protein PmbA [Oceanimonas sp. GK1]
Length = 446
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 178/449 (39%), Positives = 276/449 (61%), Gaps = 9/449 (2%)
Query: 12 IYSKSEFQQLA-QDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
I+++ +LA + L+ AK++GA + + ++ G SV R +++ IE N D + +
Sbjct: 6 IHTEQRQLELAVEQALDSAKRLGAEAAEVSISKQTGLSVNTRNAELENIEFNKDGALGIA 65
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y +DG+K G++STSD ++ T+ AA +I+R+T +D AGL D + L + +
Sbjct: 66 VY-RDGRK---GSASTSDLRPDAIARTVAAALDISRYTTADPCAGLADADQLAWQAPELE 121
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
L P + +D +A RCE A + I ++ + + NSHGF+ GY S
Sbjct: 122 LCFPREMDPNDFMELALRCERSALGRDPRIKQSDGASFSANVGIRVYGNSHGFIKGYAGS 181
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
++ +S I + +MQR+ Y+S +L PE + A RT+ RL +KI T + P
Sbjct: 182 RYGMSCVLIGEQDGDMQREYGYTSARRFDELWAPERVADEAVSRTLGRLGGRKIGTTQAP 241
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
VLF +A L ISG +LYRKS+FL+D+ G+++F + I E PH+ S+
Sbjct: 242 VLFHPDVAAGLFGHLVMAISGGNLYRKSSFLLDACGERLFPDWLSIHEQPHLNKGLASAP 301
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FDNEGV+T +R ++++G++Q Y L++YSA+KLG+ TG++GG H+ + S S +
Sbjct: 302 FDNEGVRTVERNIIEHGVLQTYLLTSYSARKLGLPVTGHAGGIHNWTVSS----SGQSFD 357
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
E+LK+M TGLLVTE+MG G+N +TGDYS+GA G+W+ENG+I Y VEEITI+G L+ MF
Sbjct: 358 ELLKQMGTGLLVTEMMGQGVNIVTGDYSRGAAGFWVENGEIAYPVEEITIAGNLKTMFAG 417
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
I AIG+DV TR+S +GS+LI+NM IAG+
Sbjct: 418 IQAIGTDVETRSSLHTGSVLIDNMKIAGQ 446
>gi|188495208|ref|ZP_03002478.1| protein PmbA [Escherichia coli 53638]
gi|419177880|ref|ZP_13721679.1| modulator of DNA gyrase family protein [Escherichia coli DEC7B]
gi|188490407|gb|EDU65510.1| protein PmbA [Escherichia coli 53638]
gi|378026733|gb|EHV89366.1| modulator of DNA gyrase family protein [Escherichia coli DEC7B]
Length = 446
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 265/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFEAPDLDLFHPAEVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLSEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|432944258|ref|ZP_20140763.1| protein pmbA [Escherichia coli KTE196]
gi|433045778|ref|ZP_20233242.1| protein pmbA [Escherichia coli KTE117]
gi|431465540|gb|ELH45648.1| protein pmbA [Escherichia coli KTE196]
gi|431550388|gb|ELI24383.1| protein pmbA [Escherichia coli KTE117]
Length = 450
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGLTVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|422783405|ref|ZP_16836189.1| PmbA protein [Escherichia coli TW10509]
gi|323975420|gb|EGB70521.1| PmbA protein [Escherichia coli TW10509]
Length = 446
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + + E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTVEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|26251140|ref|NP_757180.1| peptidase PmbA [Escherichia coli CFT073]
gi|91213788|ref|YP_543774.1| peptidase PmbA [Escherichia coli UTI89]
gi|117626581|ref|YP_859904.1| peptidase PmbA [Escherichia coli APEC O1]
gi|222159003|ref|YP_002559142.1| Protein pmbA [Escherichia coli LF82]
gi|227886712|ref|ZP_04004517.1| peptidase PmbA [Escherichia coli 83972]
gi|237703910|ref|ZP_04534391.1| peptidase PmbA [Escherichia sp. 3_2_53FAA]
gi|300987089|ref|ZP_07177996.1| TldD/PmbA family protein [Escherichia coli MS 45-1]
gi|301048561|ref|ZP_07195578.1| TldD/PmbA family protein [Escherichia coli MS 185-1]
gi|386606827|ref|YP_006113127.1| peptidase PmbA [Escherichia coli UM146]
gi|386632249|ref|YP_006151969.1| peptidase PmbA [Escherichia coli str. 'clone D i2']
gi|386637169|ref|YP_006156888.1| peptidase PmbA [Escherichia coli str. 'clone D i14']
gi|386641915|ref|YP_006108713.1| PmbA protease involved in microcin B17 maturation and sensitivity
to the DNA gyrase inhibitor LetD [Escherichia coli ABU
83972]
gi|422357782|ref|ZP_16438447.1| TldD/PmbA family protein [Escherichia coli MS 110-3]
gi|422363671|ref|ZP_16444206.1| TldD/PmbA family protein [Escherichia coli MS 153-1]
gi|422369248|ref|ZP_16449650.1| TldD/PmbA family protein [Escherichia coli MS 16-3]
gi|422840224|ref|ZP_16888195.1| pmbA [Escherichia coli H397]
gi|432360806|ref|ZP_19604010.1| protein pmbA [Escherichia coli KTE4]
gi|432409777|ref|ZP_19652465.1| protein pmbA [Escherichia coli KTE39]
gi|432430022|ref|ZP_19672473.1| protein pmbA [Escherichia coli KTE187]
gi|432434405|ref|ZP_19676819.1| protein pmbA [Escherichia coli KTE188]
gi|432454515|ref|ZP_19696730.1| protein pmbA [Escherichia coli KTE201]
gi|432493598|ref|ZP_19735420.1| protein pmbA [Escherichia coli KTE214]
gi|432510024|ref|ZP_19748888.1| protein pmbA [Escherichia coli KTE220]
gi|432522000|ref|ZP_19759147.1| protein pmbA [Escherichia coli KTE230]
gi|432566698|ref|ZP_19803232.1| protein pmbA [Escherichia coli KTE53]
gi|432571582|ref|ZP_19808078.1| protein pmbA [Escherichia coli KTE55]
gi|432586117|ref|ZP_19822493.1| protein pmbA [Escherichia coli KTE58]
gi|432590861|ref|ZP_19827196.1| protein pmbA [Escherichia coli KTE60]
gi|432605724|ref|ZP_19841926.1| protein pmbA [Escherichia coli KTE67]
gi|432649165|ref|ZP_19884936.1| protein pmbA [Escherichia coli KTE87]
gi|432757305|ref|ZP_19991843.1| protein pmbA [Escherichia coli KTE22]
gi|432776675|ref|ZP_20010935.1| protein pmbA [Escherichia coli KTE59]
gi|432781677|ref|ZP_20015870.1| protein pmbA [Escherichia coli KTE63]
gi|432790376|ref|ZP_20024499.1| protein pmbA [Escherichia coli KTE65]
gi|432800189|ref|ZP_20034184.1| protein pmbA [Escherichia coli KTE84]
gi|432819142|ref|ZP_20052859.1| protein pmbA [Escherichia coli KTE118]
gi|432825270|ref|ZP_20058930.1| protein pmbA [Escherichia coli KTE123]
gi|432842123|ref|ZP_20075552.1| protein pmbA [Escherichia coli KTE141]
gi|432896339|ref|ZP_20107549.1| protein pmbA [Escherichia coli KTE192]
gi|432976562|ref|ZP_20165390.1| protein pmbA [Escherichia coli KTE209]
gi|432993579|ref|ZP_20182202.1| protein pmbA [Escherichia coli KTE218]
gi|432997947|ref|ZP_20186521.1| protein pmbA [Escherichia coli KTE223]
gi|433010553|ref|ZP_20198959.1| protein pmbA [Escherichia coli KTE229]
gi|433031210|ref|ZP_20219044.1| protein pmbA [Escherichia coli KTE109]
gi|433060819|ref|ZP_20247838.1| protein pmbA [Escherichia coli KTE124]
gi|433090023|ref|ZP_20276370.1| protein pmbA [Escherichia coli KTE137]
gi|433118228|ref|ZP_20303996.1| protein pmbA [Escherichia coli KTE153]
gi|433127924|ref|ZP_20313453.1| protein pmbA [Escherichia coli KTE160]
gi|433141997|ref|ZP_20327223.1| protein pmbA [Escherichia coli KTE167]
gi|433151949|ref|ZP_20336934.1| protein pmbA [Escherichia coli KTE174]
gi|433166311|ref|ZP_20351027.1| protein pmbA [Escherichia coli KTE179]
gi|433171324|ref|ZP_20355930.1| protein pmbA [Escherichia coli KTE180]
gi|433201052|ref|ZP_20384921.1| protein pmbA [Escherichia coli KTE94]
gi|433210484|ref|ZP_20394135.1| protein pmbA [Escherichia coli KTE97]
gi|433215326|ref|ZP_20398886.1| protein pmbA [Escherichia coli KTE99]
gi|26111572|gb|AAN83754.1|AE016771_265 PmbA protein [Escherichia coli CFT073]
gi|91075362|gb|ABE10243.1| PmbA protease involved in Microcin B17 maturation and sensitivity
to the DNA gyrase inhibitor LetD [Escherichia coli
UTI89]
gi|115515705|gb|ABJ03780.1| putative peptide maturation protein PmbA [Escherichia coli APEC O1]
gi|222036008|emb|CAP78753.1| Protein pmbA [Escherichia coli LF82]
gi|226901822|gb|EEH88081.1| peptidase PmbA [Escherichia sp. 3_2_53FAA]
gi|227836285|gb|EEJ46751.1| peptidase PmbA [Escherichia coli 83972]
gi|300299605|gb|EFJ55990.1| TldD/PmbA family protein [Escherichia coli MS 185-1]
gi|300407784|gb|EFJ91322.1| TldD/PmbA family protein [Escherichia coli MS 45-1]
gi|307556407|gb|ADN49182.1| PmbA protease involved in microcin B17 maturation and sensitivity
to the DNA gyrase inhibitor LetD [Escherichia coli ABU
83972]
gi|307629311|gb|ADN73615.1| peptidase PmbA [Escherichia coli UM146]
gi|315288406|gb|EFU47804.1| TldD/PmbA family protein [Escherichia coli MS 110-3]
gi|315293600|gb|EFU52952.1| TldD/PmbA family protein [Escherichia coli MS 153-1]
gi|315299000|gb|EFU58254.1| TldD/PmbA family protein [Escherichia coli MS 16-3]
gi|355423148|gb|AER87345.1| peptidase PmbA [Escherichia coli str. 'clone D i2']
gi|355428068|gb|AER92264.1| peptidase PmbA [Escherichia coli str. 'clone D i14']
gi|371607433|gb|EHN96007.1| pmbA [Escherichia coli H397]
gi|430871911|gb|ELB95536.1| protein pmbA [Escherichia coli KTE4]
gi|430939269|gb|ELC59485.1| protein pmbA [Escherichia coli KTE39]
gi|430957898|gb|ELC76501.1| protein pmbA [Escherichia coli KTE187]
gi|430968819|gb|ELC85993.1| protein pmbA [Escherichia coli KTE188]
gi|430987188|gb|ELD03735.1| protein pmbA [Escherichia coli KTE201]
gi|431029372|gb|ELD42403.1| protein pmbA [Escherichia coli KTE214]
gi|431034056|gb|ELD46005.1| protein pmbA [Escherichia coli KTE220]
gi|431056101|gb|ELD65623.1| protein pmbA [Escherichia coli KTE230]
gi|431103935|gb|ELE08543.1| protein pmbA [Escherichia coli KTE53]
gi|431113061|gb|ELE16742.1| protein pmbA [Escherichia coli KTE55]
gi|431124939|gb|ELE27383.1| protein pmbA [Escherichia coli KTE58]
gi|431134419|gb|ELE36370.1| protein pmbA [Escherichia coli KTE60]
gi|431143066|gb|ELE44806.1| protein pmbA [Escherichia coli KTE67]
gi|431195091|gb|ELE94300.1| protein pmbA [Escherichia coli KTE87]
gi|431298043|gb|ELF87678.1| protein pmbA [Escherichia coli KTE22]
gi|431332563|gb|ELG19785.1| protein pmbA [Escherichia coli KTE59]
gi|431333073|gb|ELG20289.1| protein pmbA [Escherichia coli KTE63]
gi|431334223|gb|ELG21394.1| protein pmbA [Escherichia coli KTE65]
gi|431352432|gb|ELG39205.1| protein pmbA [Escherichia coli KTE84]
gi|431371927|gb|ELG57631.1| protein pmbA [Escherichia coli KTE118]
gi|431376461|gb|ELG61783.1| protein pmbA [Escherichia coli KTE123]
gi|431398899|gb|ELG82318.1| protein pmbA [Escherichia coli KTE141]
gi|431432334|gb|ELH14105.1| protein pmbA [Escherichia coli KTE192]
gi|431484185|gb|ELH63866.1| protein pmbA [Escherichia coli KTE209]
gi|431512252|gb|ELH90379.1| protein pmbA [Escherichia coli KTE218]
gi|431518016|gb|ELH95537.1| protein pmbA [Escherichia coli KTE223]
gi|431519779|gb|ELH97210.1| protein pmbA [Escherichia coli KTE229]
gi|431538411|gb|ELI14396.1| protein pmbA [Escherichia coli KTE109]
gi|431564254|gb|ELI37431.1| protein pmbA [Escherichia coli KTE124]
gi|431598814|gb|ELI68601.1| protein pmbA [Escherichia coli KTE137]
gi|431628038|gb|ELI96415.1| protein pmbA [Escherichia coli KTE153]
gi|431638529|gb|ELJ06563.1| protein pmbA [Escherichia coli KTE160]
gi|431653971|gb|ELJ21047.1| protein pmbA [Escherichia coli KTE167]
gi|431665968|gb|ELJ32676.1| protein pmbA [Escherichia coli KTE174]
gi|431681839|gb|ELJ47612.1| protein pmbA [Escherichia coli KTE179]
gi|431682194|gb|ELJ47962.1| protein pmbA [Escherichia coli KTE180]
gi|431714901|gb|ELJ79071.1| protein pmbA [Escherichia coli KTE94]
gi|431726984|gb|ELJ90748.1| protein pmbA [Escherichia coli KTE97]
gi|431730184|gb|ELJ93754.1| protein pmbA [Escherichia coli KTE99]
Length = 450
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPADVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLG +I + I E PH+L S+ FD+EGV+T++R +VK+GI+ + L++
Sbjct: 272 KSTFLLDSLGTQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIVKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|292489590|ref|YP_003532480.1| protein PmbA [Erwinia amylovora CFBP1430]
gi|292898190|ref|YP_003537559.1| protein PmbA [Erwinia amylovora ATCC 49946]
gi|428786561|ref|ZP_19004039.1| Protein pmbA [Erwinia amylovora ACW56400]
gi|291198038|emb|CBJ45141.1| protein PmbA [Erwinia amylovora ATCC 49946]
gi|291555027|emb|CBA23083.1| Protein pmbA [Erwinia amylovora CFBP1430]
gi|312173766|emb|CBX82020.1| Protein pmbA [Erwinia amylovora ATCC BAA-2158]
gi|426274830|gb|EKV52570.1| Protein pmbA [Erwinia amylovora ACW56400]
Length = 446
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 175/455 (38%), Positives = 270/455 (59%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K S+ + +Q L AK + + + + G SV R G ++ +E N+D
Sbjct: 1 MKLLSQVAEQRKTLEQAVATALELAKA-SSDGAEVAVTKTTGISVSTRHGSVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q+ K G++S++D ++ T+ AA +IAR T+ D +AG+ D L
Sbjct: 60 GALGITVYHQNRK----GSASSTDLSHDAIQRTVQAALDIARHTSPDPYAGVADPELLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
D L+ P + D A +A R E A + I N E + + NSHG +
Sbjct: 116 AAPDLDLFHPSEIDADRAIELAARAEQAALKSDKRITNTEGGSFNSHVGIKVFGNSHGMI 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
GY S+H +S IA + +M+RD Y+ L PE +G A+RT+SRL +K+
Sbjct: 176 QGYCSSRHSLSSCVIAEENGDMERDYAYTIGRAMADLKSPEYVGEECARRTLSRLSPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
ST K PV+F A A L ISG S+YRKSTFL+DSLG+++ + I E PH+L
Sbjct: 236 STMKAPVMFAAEAATGLFGHLVGAISGGSVYRKSTFLLDSLGQQVLPDWLTIEEHPHLLK 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+TQ+R ++K+G++Q + L++YSA+KLG+++TG++GG H+ I
Sbjct: 296 GLASTPFDSEGVRTQRRDIIKDGVLQNWLLTSYSARKLGLQSTGHAGGIHNWRIAGQ--- 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ +MLK++ TGLLVTELMG G++ ITGDYS+GA G+W+ENG IQY V EITI+G L
Sbjct: 353 -GHSFDDMLKQLGTGLLVTELMGQGVSGITGDYSRGASGFWVENGVIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M++ +V++GSD+ TR++ GS+L+ M IAG+
Sbjct: 412 KDMWRNMVSVGSDIETRSNIQCGSVLLPEMKIAGQ 446
>gi|401676861|ref|ZP_10808843.1| peptidase U62 modulator of DNA gyrase [Enterobacter sp. SST3]
gi|400215984|gb|EJO46888.1| peptidase U62 modulator of DNA gyrase [Enterobacter sp. SST3]
Length = 450
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 174/435 (40%), Positives = 270/435 (62%), Gaps = 11/435 (2%)
Query: 25 MLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNS 84
ML K GA + ++ G SV R G+++ +E N+D + + +Y Q+ K G++
Sbjct: 27 MLASEKSDGAE---VAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSA 79
Query: 85 STSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKL 144
S++D ++ T+ AA +IAR+T+ D +AG+ D++ L + D L+ P ++ D+A
Sbjct: 80 SSTDLSPDAIARTVQAALDIARYTSPDPYAGVADKDLLAFDAPDLDLFHPAEVTPDEAIE 139
Query: 145 IAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK 204
+A R E + + I N E + + NSHG + GY ++H +S IA +
Sbjct: 140 LAARAEQASLQADKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENG 199
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
+M+RD Y+ L PE +G A+RT+SRL +K+ST K PV+F +A L
Sbjct: 200 DMERDYAYTIGRALGDLQSPEWVGKECAERTLSRLSPRKLSTMKAPVIFANEVATGLFGH 259
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
I+G S+YRKSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R +V
Sbjct: 260 LVGAIAGGSVYRKSTFLLDSLGKQILPEWLTIEEHPHLLKGLASTPFDSEGVRTERRDIV 319
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
K+GI+ + L+ YSA+KLG+K+TG++GG H+ I N ++MLK+M TGL+VTE
Sbjct: 320 KDGILTQWLLTNYSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQMLKEMGTGLVVTE 375
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
LMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++
Sbjct: 376 LMGQGVSGITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNI 435
Query: 445 TSGSILIENMIIAGK 459
GS+L+ M IAG+
Sbjct: 436 QCGSVLLPEMKIAGQ 450
>gi|194433887|ref|ZP_03066160.1| protein PmbA [Shigella dysenteriae 1012]
gi|417675739|ref|ZP_12325158.1| modulator of DNA gyrase family protein [Shigella dysenteriae
155-74]
gi|420350177|ref|ZP_14851535.1| protein pmbA [Shigella boydii 965-58]
gi|194417868|gb|EDX33964.1| protein PmbA [Shigella dysenteriae 1012]
gi|332083823|gb|EGI89041.1| modulator of DNA gyrase family protein [Shigella dysenteriae
155-74]
gi|391263382|gb|EIQ22389.1| protein pmbA [Shigella boydii 965-58]
Length = 446
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSNCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|254492290|ref|ZP_05105464.1| TldD/PmbA family [Methylophaga thiooxidans DMS010]
gi|224462615|gb|EEF78890.1| TldD/PmbA family [Methylophaga thiooxydans DMS010]
Length = 444
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 176/444 (39%), Positives = 271/444 (61%), Gaps = 9/444 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
K ++ A+ L A K+GA+ + + + G SV VR+ ++ +E NND + + ++
Sbjct: 7 KPSLERAAEIALEQANKLGATAAEVGLSHSEGLSVTVRQRDVETLEHNNDTGLGITVFFG 66
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K +SSTSD ++ + + AA NIA+ T +D+ AGL D + + + D L P
Sbjct: 67 QSK----ASSSTSDLSPAAIQEAVQAACNIAKHTQADDAAGLADADLMATSLPDLSLDHP 122
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
W L+++ A +A CE + ++ I N+E V++ + + ANSHGF+ S+H I
Sbjct: 123 WNLTVEQAIELATDCEQAGLDSDTRISNSEGATVSSHRGQRIYANSHGFLGKTQSSRHSI 182
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S IA + MQRD WY D L +G AA+RT++RL A + T PVLF
Sbjct: 183 SASLIAKDERGMQRDYWYDMARDASDLSSATSVGIKAAQRTLARLGAGDVKTGSYPVLFT 242
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
A +A L I G +LYRK++FL+D G++IF S + I E PH+L + GS++FD E
Sbjct: 243 ADVAPSLFGQLIAAIRGGALYRKASFLLDKRGEQIFPSFVHIHEQPHLLKALGSAAFDAE 302
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD-NLKEML 373
GV T R ++ +G++QGY L +Y+A++LGM TT N+GG H+L I S S+D + ++
Sbjct: 303 GVATSNRDIILDGVLQGYVLDSYAARRLGMSTTANAGGVHNLSIDS----STDMGFEGLI 358
Query: 374 KKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVA 433
K+M+ G++VTE MG G+N + GDYS+GA G+W+ENG+IQY V+E TI+ LQ+MF ++VA
Sbjct: 359 KQMDKGIIVTETMGMGVNIVNGDYSQGAAGFWVENGEIQYPVDEFTIASNLQDMFMKLVA 418
Query: 434 IGSDVLTRNSNTSGSILIENMIIA 457
IGSD+ R + GS+L++ M+IA
Sbjct: 419 IGSDIDLRGNTRCGSVLLDKMMIA 442
>gi|104780299|ref|YP_606797.1| peptidase U62 tlde [Pseudomonas entomophila L48]
gi|95109286|emb|CAK13983.1| Peptidase U62 TldE [Pseudomonas entomophila L48]
Length = 448
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 171/441 (38%), Positives = 266/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEAIVAEARRQGASACEVAVSLEQGLSTTVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS ++ +T+ AA IA+ T+ D +GL D + + D LY W +
Sbjct: 75 ----GSASTSASGADAIRETVAAALAIAKHTSEDECSGLADAALMARDIPDLDLYHDWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ A +A CE AF+ + I N + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 EPEKAIEMALACEAAAFDADKRIKNADGTTLNTHQGVRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N + L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAESDGQMQRDYWYDVNRQGQLLADPRSIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL ++G+++F + + + E PH+ + GS++FD +G+
Sbjct: 251 AGGLFGSFLSAISGGNLYRKSSFLEGTIGQRLFPTWLTLDERPHLPRALGSAAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V G + Y L TYS +KL + +T NSGG H+L + T ++ ++++M
Sbjct: 311 TYAKPFVDKGELVSYILGTYSGRKLKLPSTANSGGVHNLFV----THGVEDQAALIRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+E+G+IQ+ V+E+TI+G +++MF+QIVAIGSD
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVEHGEIQFPVQEVTIAGNMKDMFQQIVAIGSD 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ TR++ SGS+LIE M +AG
Sbjct: 427 IETRSNIHSGSVLIERMTVAG 447
>gi|352086314|ref|ZP_08953855.1| peptidase U62 modulator of DNA gyrase [Rhodanobacter sp. 2APBS1]
gi|351679613|gb|EHA62750.1| peptidase U62 modulator of DNA gyrase [Rhodanobacter sp. 2APBS1]
Length = 455
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 174/461 (37%), Positives = 272/461 (59%), Gaps = 8/461 (1%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIE 60
M ++ ++ + +Y +LA+D++ A+ GAS + + + G SV VR G+++ +E
Sbjct: 1 MSEVAISQDRSLYELDRLAELAEDVIRRARAAGASQAEVAASIDTGLSVNVRLGEVETVE 60
Query: 61 QNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDEN 120
D+ + +Y K G++ST+D S+ T+ A IAR+T +D AGL D
Sbjct: 61 HTRDRGFGLTVYFGQRK----GSASTADLHPDSIQATLEQACAIARYTEADPAAGLADAA 116
Query: 121 TLEMNPLDFKLYTPWFLSIDDAKLIAYRCENE-AFNFNSLIVNNENTGVTTQQSHFLLAN 179
+ D L+ PW +ID A+ IA E A ++ I N++ V + + AN
Sbjct: 117 RMATAFPDLDLWHPW--AIDTAQAIALGVAIEDAGRAHAGISNSDGASVQAGEGLSVYAN 174
Query: 180 SHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRL 239
SHGF+ ++H +S++ IA +G MQRD WY S + +G AA+RT++R+
Sbjct: 175 SHGFVGRERGTRHALSLALIAGEGDGMQRDYWYDSVRAAGDFISAQALGDKAAERTLARM 234
Query: 240 KAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIED 299
A+ +STR+CPVLF LA L+ +SG +LYR+++FL+D GK+I + + I E
Sbjct: 235 GARSLSTRQCPVLFAPELARGLVGHLLGAVSGGALYRQASFLLDHAGKRIMPAWLNIDER 294
Query: 300 PHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIII 359
PH+ GS +FD EGV T +V+ G++ Y L +YSA+KLG+ +TGN+GG H+LI+
Sbjct: 295 PHLPRGQGSGNFDAEGVATVDGALVEGGVLARYVLGSYSARKLGLPSTGNAGGVHNLIVE 354
Query: 360 SNKTKSS-DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEI 418
+ ML+++ GLLVTE+MG G++ +TGDYS+GA G+W+ENG I Y VE I
Sbjct: 355 PGSVDGERSDFDGMLQRLGNGLLVTEVMGQGVSTVTGDYSRGAAGFWVENGAIAYPVEGI 414
Query: 419 TISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
TI+ L++MF IVA+G+DV R+ +GSIL+E M +AG+
Sbjct: 415 TIAANLRDMFAGIVAVGADVDPRSHILTGSILLERMTVAGE 455
>gi|157372617|ref|YP_001480606.1| peptidase PmbA [Serratia proteamaculans 568]
gi|157324381|gb|ABV43478.1| peptidase U62 modulator of DNA gyrase [Serratia proteamaculans 568]
Length = 446
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 173/455 (38%), Positives = 272/455 (59%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K ++ + +Q L A+ G+ + + + G SV R G+++ +E N+D
Sbjct: 1 MKVVTQVAQQRKALEQAVSQALELARA-GSDAAEVAVTKSTGISVSTRFGEVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q K G++S++D ++ T+ AA +IAR+T+ D AG +++ L
Sbjct: 60 GALGITVYHQQRK----GSASSTDLSPDAIARTVQAALDIARYTSVDPHAGPAEKDLLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
+ D L+ P L D +A R E + + I N E + + NSHG +
Sbjct: 116 DAPDLDLFHPAELDADRGIELAARAEQASLAADKRITNTEGGSFNSHYGIKVFGNSHGML 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S+H +S IA +G +M+RD Y+ L PE +G A+RT+SRL +K+
Sbjct: 176 QSYCSSRHSLSSCVIAEQGGDMERDYAYTIGRAMSDLQSPEWVGQECARRTLSRLAPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
ST PVLF + +A L ISG+S+YRKSTFL+DSLGK+I + I E PH+L
Sbjct: 236 STMTAPVLFASEVATGLFGHLVGAISGSSVYRKSTFLLDSLGKQILPEWLTIEEHPHLLK 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+TQ+R +VK+G++Q + +++Y+A+KLGM +TG++GG H+ I
Sbjct: 296 GLASTPFDSEGVRTQRRDIVKDGVLQTWLMTSYAARKLGMHSTGHAGGIHNWRIAGQ--- 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
++ MLK++ TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L
Sbjct: 353 -GNDFAGMLKQLGTGLVVTELMGQGVSGITGDYSRGAAGFWVENGEIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M + IV++GSD+ TR++ GS+L+ M IAG+
Sbjct: 412 KDMLRNIVSVGSDIETRSNIQCGSVLLPEMKIAGQ 446
>gi|296101009|ref|YP_003611155.1| putative peptide maturation protein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295055468|gb|ADF60206.1| putative peptide maturation protein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 446
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D ++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPDAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ D++ L + D L+ P ++ D+A +A R E +
Sbjct: 88 TVQAALDIARYTSPDPYAGVADKDLLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 ALGDLQSPEWVGKACAERTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R +VK+GI+ + L+
Sbjct: 268 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASTPFDSEGVRTERRDIVKDGILTQWLLTN 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQMLKEMGTGLVVTELMGQGVSGITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|386602298|ref|YP_006103804.1| protein PmbA [Escherichia coli IHE3034]
gi|387619627|ref|YP_006122649.1| peptidase PmbA [Escherichia coli O83:H1 str. NRG 857C]
gi|422750794|ref|ZP_16804704.1| PmbA protein [Escherichia coli H252]
gi|422756130|ref|ZP_16809953.1| PmbA protein [Escherichia coli H263]
gi|442606236|ref|ZP_21021037.1| TldE protein, part of TldE/TldD proteolytic complex [Escherichia
coli Nissle 1917]
gi|294493659|gb|ADE92415.1| protein PmbA [Escherichia coli IHE3034]
gi|312948888|gb|ADR29715.1| peptidase PmbA [Escherichia coli O83:H1 str. NRG 857C]
gi|323950694|gb|EGB46572.1| PmbA protein [Escherichia coli H252]
gi|323955524|gb|EGB51288.1| PmbA protein [Escherichia coli H263]
gi|441712841|emb|CCQ07014.1| TldE protein, part of TldE/TldD proteolytic complex [Escherichia
coli Nissle 1917]
Length = 446
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPADVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLG +I + I E PH+L S+ FD+EGV+T++R +VK+GI+ + L++
Sbjct: 268 KSTFLLDSLGTQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIVKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|170021754|ref|YP_001726708.1| peptidase PmbA [Escherichia coli ATCC 8739]
gi|191167268|ref|ZP_03029086.1| protein PmbA [Escherichia coli B7A]
gi|193069792|ref|ZP_03050742.1| protein PmbA [Escherichia coli E110019]
gi|300935902|ref|ZP_07150858.1| TldD/PmbA family protein [Escherichia coli MS 21-1]
gi|300950239|ref|ZP_07164178.1| TldD/PmbA family protein [Escherichia coli MS 116-1]
gi|300957150|ref|ZP_07169389.1| TldD/PmbA family protein [Escherichia coli MS 175-1]
gi|301646691|ref|ZP_07246554.1| TldD/PmbA family protein [Escherichia coli MS 146-1]
gi|312973949|ref|ZP_07788120.1| modulator of DNA gyrase family protein [Escherichia coli 1827-70]
gi|387615004|ref|YP_006118121.1| putative modulator of DNA gyrase [Escherichia coli ETEC H10407]
gi|432414788|ref|ZP_19657428.1| protein pmbA [Escherichia coli KTE44]
gi|432488039|ref|ZP_19729938.1| protein pmbA [Escherichia coli KTE212]
gi|432668676|ref|ZP_19904236.1| protein pmbA [Escherichia coli KTE119]
gi|432811980|ref|ZP_20045832.1| protein pmbA [Escherichia coli KTE101]
gi|433176179|ref|ZP_20360671.1| protein pmbA [Escherichia coli KTE232]
gi|169756682|gb|ACA79381.1| peptidase U62 modulator of DNA gyrase [Escherichia coli ATCC 8739]
gi|190902721|gb|EDV62452.1| protein PmbA [Escherichia coli B7A]
gi|192956846|gb|EDV87299.1| protein PmbA [Escherichia coli E110019]
gi|300316094|gb|EFJ65878.1| TldD/PmbA family protein [Escherichia coli MS 175-1]
gi|300450429|gb|EFK14049.1| TldD/PmbA family protein [Escherichia coli MS 116-1]
gi|300458921|gb|EFK22414.1| TldD/PmbA family protein [Escherichia coli MS 21-1]
gi|301075099|gb|EFK89905.1| TldD/PmbA family protein [Escherichia coli MS 146-1]
gi|309704741|emb|CBJ04092.1| putative modulator of DNA gyrase [Escherichia coli ETEC H10407]
gi|310331483|gb|EFP98739.1| modulator of DNA gyrase family protein [Escherichia coli 1827-70]
gi|430945603|gb|ELC65672.1| protein pmbA [Escherichia coli KTE44]
gi|431012648|gb|ELD26420.1| protein pmbA [Escherichia coli KTE212]
gi|431215206|gb|ELF12909.1| protein pmbA [Escherichia coli KTE119]
gi|431358736|gb|ELG45387.1| protein pmbA [Escherichia coli KTE101]
gi|431685403|gb|ELJ50977.1| protein pmbA [Escherichia coli KTE232]
Length = 450
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 265/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFEAPDLDLFHPAEVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|419929746|ref|ZP_14447411.1| peptidase PmbA [Escherichia coli 541-1]
gi|425308095|ref|ZP_18697745.1| protein pmbA [Escherichia coli N1]
gi|388402687|gb|EIL63253.1| peptidase PmbA [Escherichia coli 541-1]
gi|408223876|gb|EKI47622.1| protein pmbA [Escherichia coli N1]
Length = 446
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 265/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFEAPDLDLFHPAEVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|401761989|ref|YP_006576996.1| peptidase PmbA [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400173523|gb|AFP68372.1| peptidase PmbA [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 446
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 174/435 (40%), Positives = 269/435 (61%), Gaps = 11/435 (2%)
Query: 25 MLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNS 84
ML K GA + ++ G SV R G+++ +E N+D + + +Y Q+ K G++
Sbjct: 23 MLASEKSDGAE---VAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSA 75
Query: 85 STSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKL 144
S++D ++ T+ AA +IAR+T+ D +AG+ D+ L + D L+ P ++ D+A
Sbjct: 76 SSTDLSPDAIARTVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPAEVTPDEAIE 135
Query: 145 IAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK 204
+A R E + + I N E + + NSHG + GY ++H +S IA +
Sbjct: 136 LAARAEQASLQADKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENG 195
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
+M+RD Y+ L PE +G A+RT+SRL +K+ST K PV+F +A L
Sbjct: 196 DMERDYAYTIGRALGDLQSPEWVGKECAERTLSRLSPRKLSTMKAPVIFANEVATGLFGH 255
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
I+G S+YRKSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R +V
Sbjct: 256 LVGAIAGGSVYRKSTFLLDSLGKQILPEWLTIEEHPHLLKGLASTPFDSEGVRTERRDIV 315
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
K+GI+ + L+ YSA+KLG+K+TG++GG H+ I N ++MLK+M TGL+VTE
Sbjct: 316 KDGILTQWLLTNYSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQMLKEMGTGLVVTE 371
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
LMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++
Sbjct: 372 LMGQGVSGITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNI 431
Query: 445 TSGSILIENMIIAGK 459
GS+L+ M IAG+
Sbjct: 432 QCGSVLLPEMKIAGQ 446
>gi|331671142|ref|ZP_08371975.1| protein PmbA [Escherichia coli TA271]
gi|331061731|gb|EGI33657.1| protein PmbA [Escherichia coli TA271]
Length = 446
Score = 337 bits (864), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSNCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|295098382|emb|CBK87472.1| microcin-processing peptidase 1. Unknown type peptidase. MEROPS
family U62 [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 450
Score = 337 bits (864), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 265/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D ++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPDAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 92 TVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 ALGDLQSPEWVGKACAERTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R +VK+GI+ + L+
Sbjct: 272 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASTPFDSEGVRTERRDIVKDGILTQWLLTN 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQMLKEMGTGLVVTELMGQGVSGITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|423142911|ref|ZP_17130549.1| TldD/PmbA family protein [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|379049502|gb|EHY67397.1| TldD/PmbA family protein [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
Length = 446
Score = 337 bits (864), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 265/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ D+ L + D L+ P +S D+A +A R E +
Sbjct: 88 TVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPADVSPDEAIELAARAEQASLKA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 208 AMADLQSPEWVGAECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +VK G++ + L+
Sbjct: 268 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIVKEGVLTQWLLTN 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV++G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGASGFWVENGEIQYPVSEITIAGNLKEMWRNIVSVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|398891781|ref|ZP_10645055.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM55]
gi|398186338|gb|EJM73714.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM55]
Length = 448
Score = 337 bits (864), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 177/441 (40%), Positives = 270/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEARRQGASACEVAVSLEQGLSTTVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D + + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAKHTSEDEASGLADAALMARDIQDFDLFHQWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF +S I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEQALACEAAAFAADSRIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGNLLADPVSIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG SLYRKS+FL +LG+K+F + I E PH++ + GS++FD +G+
Sbjct: 251 AGGLFGSFLSAISGGSLYRKSSFLEGTLGQKLFPEWLTIDERPHLMRALGSAAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TYS +KLGM +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVEKGELVSYILGTYSGRKLGMPSTANAGGVHNLFV----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGQGLNMVTGDYSRGAAGYWVENGEIQFAVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|188535052|ref|YP_001908849.1| peptidase PmbA [Erwinia tasmaniensis Et1/99]
gi|188030094|emb|CAO97980.1| PmbA protease involved in Microcin B17 maturation and sensitivity
to the DNA gyrase inhibitor LetD [Erwinia tasmaniensis
Et1/99]
Length = 446
Score = 337 bits (864), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 175/453 (38%), Positives = 275/453 (60%), Gaps = 11/453 (2%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHS---SIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
K + +E +++ + + A ++ ++ S + + G V R G ++ +E N+D
Sbjct: 2 KLLSQVAEQRKILEQAVATALELASTSSDGAEVAVTKTTGIGVSTRYGAVENVEFNSDGA 61
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +Y Q+ K G++S++D + ++ T+ AA +IAR+T+ D +AG+ D L
Sbjct: 62 LGITVYYQNRK----GSASSTDLSQDAIQRTVQAALDIARYTSPDPYAGVADPELLAFEA 117
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D L+ P + D A +A R E A + I N E + + NSHG + G
Sbjct: 118 PDLDLFHPSEIDADRAIELAARAEQAALKADKRITNTEGGSFNSHVGIKVFGNSHGMIQG 177
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
Y S+H +S IA + +M+RD Y+ + L PE +G A+RT+SRL +K+ST
Sbjct: 178 YCSSRHSLSSCVIAEENGDMERDYAYTIGRAMEDLQSPEYVGEECARRTLSRLSPRKLST 237
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
K PV+F A +A L ISG S+YRKSTFL+DSLG++I + I E PH+L
Sbjct: 238 MKAPVMFAAEVATGLFGHLVGAISGGSVYRKSTFLLDSLGQQILPEWLTIEEHPHLLKGL 297
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
S+ FD EGV+T +R +VK G++Q + L++YSA+KLG+++TG++GG H+ I+ + S
Sbjct: 298 ASTPFDGEGVRTHRRDIVKEGVLQNWLLTSYSARKLGLQSTGHAGGIHNW-RIAGQGHSF 356
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
D MLK++ TGLLVTELMG G++ ITGDYS+GA G+W+ENG IQY V EITI+G L++
Sbjct: 357 DG---MLKQLGTGLLVTELMGQGVSGITGDYSRGASGFWVENGVIQYPVSEITIAGNLKD 413
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ +V++GSD+ TR++ GS+L+ M IAG+
Sbjct: 414 MWRNMVSVGSDIETRSNIQCGSVLLPEMKIAGQ 446
>gi|392977358|ref|YP_006475946.1| peptidase PmbA [Enterobacter cloacae subsp. dissolvens SDM]
gi|392323291|gb|AFM58244.1| peptidase PmbA [Enterobacter cloacae subsp. dissolvens SDM]
Length = 446
Score = 337 bits (864), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D ++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPDAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ D++ L + D L+ P ++ D+A +A R E +
Sbjct: 88 TVQAALDIARYTSPDPYAGVADKDLLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 ALGDLQSPEWVGKACAERTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R +VK+G++ + L+
Sbjct: 268 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASTPFDSEGVRTERRDIVKDGVLTQWLLTN 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQMLKEMGTGLVVTELMGQGVSGITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|156326636|ref|XP_001618661.1| hypothetical protein NEMVEDRAFT_v1g224925 [Nematostella vectensis]
gi|156199744|gb|EDO26561.1| predicted protein [Nematostella vectensis]
Length = 437
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 182/433 (42%), Positives = 265/433 (61%), Gaps = 12/433 (2%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q + ++ AKK GAS + + G S VR+G+++ +E N D+ + +Y+ K
Sbjct: 15 LQAQVEQIIAEAKKQGASACEVAVSVEQGLSTTVRQGEVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTL--EMNPLDFKLYTPW 135
G++STS + ++ +T+ AA IA+ + D AGL D + E+ PLD LY W
Sbjct: 75 ----GSASTSASGEAAIRETVAAALAIAKHASEDECAGLADAGLMARELPPLD--LYHAW 128
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
++ + A A CE AF + I N + T + T Q + NSHGF+SGY ++H +S
Sbjct: 129 SITPEQAIEQALSCEAAAFAADQRIKNADGTTLNTHQGCRVYGNSHGFISGYASTRHSLS 188
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
IA G +MQRD WY N + L IG AA+R +SRL A+ + T + PVLF A
Sbjct: 189 CVMIAELGGQMQRDYWYDVNRQGELLADAGSIGRRAAERAVSRLGARPVPTCEVPVLFAA 248
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
LA L F ISG +LYRKS+FL DSLG+++F ++I E PHI + GS++FD +G
Sbjct: 249 ELATGLFGSFLAAISGGNLYRKSSFLEDSLGQQLFPEWLKIDERPHIPRALGSAAFDGDG 308
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
+ T + V+ G + Y L TYS +KLGM +T NSGG H+L + + ++ K +LK+
Sbjct: 309 LATYAKSFVERGELLSYVLGTYSGRKLGMPSTANSGGVHNLFV----SHGDEDQKALLKR 364
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ+ V+E+TI+G L++MFKQIVA+G
Sbjct: 365 MGRGLLVTELMGQGLNMVTGDYSRGAGGYWVENGEIQFPVQEVTIAGNLRDMFKQIVAVG 424
Query: 436 SDVLTRNSNTSGS 448
SD+ R++ +GS
Sbjct: 425 SDLELRSNIRTGS 437
>gi|398927880|ref|ZP_10663103.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM48]
gi|398169195|gb|EJM57184.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM48]
Length = 448
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 177/441 (40%), Positives = 270/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEARRQGASACEVAVSLEQGLSTTVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D + + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAKHTSEDEASGLADAALMARDIQDFDLFHEWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF +S I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEQALACEAAAFAADSRIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGNLLADPVSIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG SLYRKS+FL +LG+K+F + I E PH++ + GS++FD +G+
Sbjct: 251 AGGLFGSFLSAISGGSLYRKSSFLEGTLGQKLFPEWLTIDERPHLMRAMGSAAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TYS +KLGM +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVEKGELVSYILGTYSGRKLGMPSTANAGGVHNLFV----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGQGLNMVTGDYSRGAAGYWVENGEIQFAVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|417710465|ref|ZP_12359475.1| modulator of DNA gyrase family protein [Shigella flexneri K-272]
gi|417720383|ref|ZP_12369255.1| modulator of DNA gyrase family protein [Shigella flexneri K-227]
gi|333011223|gb|EGK30637.1| modulator of DNA gyrase family protein [Shigella flexneri K-272]
gi|333012114|gb|EGK31496.1| modulator of DNA gyrase family protein [Shigella flexneri K-227]
Length = 446
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 267/423 (63%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + + L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPNLDLFHPAEVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGHGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|334123713|ref|ZP_08497733.1| peptide maturation protein PmbA [Enterobacter hormaechei ATCC
49162]
gi|333390256|gb|EGK61401.1| peptide maturation protein PmbA [Enterobacter hormaechei ATCC
49162]
Length = 450
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 265/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D ++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPDAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 92 TVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYSSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 ALGDLQSPEWVGKECAERTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R +VK+G++ + L+
Sbjct: 272 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASTPFDSEGVRTERRDIVKDGVLTQWLLTN 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQMLKEMGTGLVVTELMGQGVSGITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|344208333|ref|YP_004793474.1| peptidase U62 modulator of DNA gyrase [Stenotrophomonas maltophilia
JV3]
gi|343779695|gb|AEM52248.1| peptidase U62 modulator of DNA gyrase [Stenotrophomonas maltophilia
JV3]
Length = 455
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/441 (38%), Positives = 268/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
L+Q +L+ A+ +GAS + + +E G V VR G+++ ++ D+ + V +Y K
Sbjct: 21 LADLSQQLLDRARALGASQAEVSCSEDRGLEVNVRLGEVETVQSTRDRGIAVTVYFGQRK 80
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST D + SL T+ A IAR T D AGL + + + + + PW L
Sbjct: 81 ----GSASTGDLNEASLAATVEQACAIARHTEDDPAAGLAEAALMATDFPELDGWHPWAL 136
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D+A +A CE ++ I N++ V++ QS + ANSHGF + H + +
Sbjct: 137 QADEAVDLALACEAAGREADAQIRNSDGASVSSMQSLSVYANSHGFFGRERGTHHSVGCA 196
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD WY+S + L+ ++G AA+RT++RL+ + ++T PVLF +
Sbjct: 197 LIAGQGDGMQRDGWYTSALAREDLEDVGLVGRRAAERTVARLQPRSLATGSMPVLFAPEV 256
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G+++F +QI E PH+ S++FD +GV
Sbjct: 257 ARSLVGHLLSAVSGGALYRQASFLLDSVGQRLFPEWMQIDELPHLRRGLRSAAFDGDGVA 316
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T+ +V++G++Q Y L +YSA+KLG++TT N+GG H++ + +N + L+E+ ++M
Sbjct: 317 TRASALVRDGVLQRYVLGSYSARKLGLQTTANAGGVHNVQLAAN----AGPLEEIARQMG 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+ +ENG+I Y V+ ITI+G L+ MF I A+GSD
Sbjct: 373 DGLLVTELMGQGVNGVTGDYSRGAGGFRVENGEILYPVDGITIAGNLREMFSSIEAVGSD 432
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ +GSIL+ M IAG
Sbjct: 433 VDPRSHIRTGSILLGRMTIAG 453
>gi|24115456|ref|NP_709966.1| peptidase PmbA [Shigella flexneri 2a str. 301]
gi|384545778|ref|YP_005729842.1| putative peptide maturation protein [Shigella flexneri 2002017]
gi|415860193|ref|ZP_11534267.1| modulator of DNA gyrase family protein [Shigella flexneri 2a str.
2457T]
gi|417731274|ref|ZP_12379951.1| modulator of DNA gyrase family protein [Shigella flexneri K-671]
gi|417741186|ref|ZP_12389748.1| modulator of DNA gyrase family protein [Shigella flexneri 4343-70]
gi|24054774|gb|AAN45673.1| putative peptide maturation protein [Shigella flexneri 2a str. 301]
gi|281603565|gb|ADA76549.1| putative peptide maturation protein [Shigella flexneri 2002017]
gi|313646433|gb|EFS10895.1| modulator of DNA gyrase family protein [Shigella flexneri 2a str.
2457T]
gi|332748969|gb|EGJ79392.1| modulator of DNA gyrase family protein [Shigella flexneri K-671]
gi|332749248|gb|EGJ79669.1| modulator of DNA gyrase family protein [Shigella flexneri 4343-70]
Length = 450
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + + L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPNLDLFHPAEVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|416052884|ref|ZP_11578519.1| PmbA protein [Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
gi|347991676|gb|EGY33139.1| PmbA protein [Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
Length = 453
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/461 (38%), Positives = 285/461 (61%), Gaps = 12/461 (2%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDM---LNYAKKIGASHSSIEFNEGNGFSVFVRKGKID 57
M+Q +S + + E QQL + + A+K GA+ + + + G SV R +I+
Sbjct: 1 MQQKTLKKSTALLRQQE-QQLRDAVSLAIEIAQKAGAT-AEVGVTKSGGLSVSTRLREIE 58
Query: 58 VIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLP 117
+E NND + + +Y+ K GN+STSD ++ T+ AA IA++T+ D+ GL
Sbjct: 59 NVEFNNDGALGISVYLGQQK----GNASTSDLTPDAIKSTVQAALAIAKYTSPDDCTGLA 114
Query: 118 DENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLL 177
D+ + + D LY + +D A +A E A + IVN+E +
Sbjct: 115 DKELIAFDAPDLALYHAAEIEVDHAVQLALETEKAALEHDVRIVNSEGASFNAHTGVRVY 174
Query: 178 ANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTIS 237
NSHG + Y S++ +S S IA ++++RD Y+ D +L QP+ +G +AA++ I+
Sbjct: 175 GNSHGMLQSYLSSRYSLSCSVIAEHNEQLERDYEYTVARDITQLAQPKWVGEHAAQKAIA 234
Query: 238 RLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQII 297
RL+ +K++T++ PV+F +A L++ A ISG+SLYRK++FL+D LGK++ I+
Sbjct: 235 RLQPQKLATQQAPVIFLNDVATGLISHLAAAISGSSLYRKASFLLDHLGKQVLPDWFDIV 294
Query: 298 EDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLI 357
E PH+LG S+ FD+EGV+TQ +++NGI+Q Y L++YS +KLGM++ G++GG H+ +
Sbjct: 295 ERPHLLGQLASTPFDSEGVRTQDMDIIRNGILQTYLLTSYSGRKLGMQSNGHAGGIHNWL 354
Query: 358 IISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEE 417
+ K SS L +L++M+ GLLVTE+MG G+N ++GDYS+GA G+W+ENG IQY V E
Sbjct: 355 V---KANSSGKLTALLRQMDRGLLVTEVMGQGVNPVSGDYSRGAAGFWVENGAIQYPVAE 411
Query: 418 ITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
ITI+G+L M + IVA+G D+ R++ +GSIL+ENM I+G
Sbjct: 412 ITIAGQLPEMLRNIVAVGDDIEHRSNIQTGSILLENMKISG 452
>gi|293394196|ref|ZP_06638496.1| peptide maturation protein PmbA [Serratia odorifera DSM 4582]
gi|291423174|gb|EFE96403.1| peptide maturation protein PmbA [Serratia odorifera DSM 4582]
Length = 446
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/427 (39%), Positives = 261/427 (61%), Gaps = 8/427 (1%)
Query: 33 GASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKK 92
G+ + + + G SV R G+++ +E N+D + + +Y Q K G++S++D
Sbjct: 28 GSDAAEVAVTKTTGISVSTRFGEVENVEFNSDGALGITVYHQQRK----GSASSTDLSPD 83
Query: 93 SLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENE 152
++ T+ AA +IAR+T+ D +AG + L D L+ P L + +A R E
Sbjct: 84 AIARTVQAALDIARYTSPDPYAGPAERQLLAFEAPDLDLFHPAELDAERGIELAARAEQA 143
Query: 153 AFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWY 212
+ + I N E + + NSHG + Y S+H +S IA +M+RD Y
Sbjct: 144 SLAADKRITNTEGGSFNSHYGIKVFGNSHGMLQSYCSSRHSLSSCVIAEHQGDMERDYAY 203
Query: 213 SSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGN 272
+ L PE +G A+RT+SRL +K+ST K PVLF A +A L ISG+
Sbjct: 204 TIGRAMSDLQSPEWVGAECARRTLSRLAPRKLSTMKAPVLFAAEVATGLFGHLVGAISGS 263
Query: 273 SLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGY 332
S+YRKSTFL+DSLGK+I + + I E PH+L S+ FD+EGV+TQ+R +VK+G++Q +
Sbjct: 264 SVYRKSTFLLDSLGKQILPAWLTIEEHPHLLKGLASTPFDSEGVRTQRRDIVKDGVLQTW 323
Query: 333 FLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINY 392
L++Y+A+KLGM++TG++GG H+ I ++ MLK++ TGL+VTELMG G++
Sbjct: 324 LLTSYAARKLGMQSTGHAGGIHNWRIAGQ----GNDFAAMLKQLGTGLVVTELMGQGVSG 379
Query: 393 ITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIE 452
+TGDYS+GA G+W+ENG+IQY V EITI+G L++M + IV++GSD+ TR++ GS+L+
Sbjct: 380 VTGDYSRGASGFWVENGEIQYPVSEITIAGNLKDMLRNIVSVGSDIETRSNIQCGSVLLP 439
Query: 453 NMIIAGK 459
M IAG+
Sbjct: 440 EMKIAGE 446
>gi|418039856|ref|ZP_12678109.1| TldD/PmbA family protein [Escherichia coli W26]
gi|383477153|gb|EID69079.1| TldD/PmbA family protein [Escherichia coli W26]
Length = 450
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 265/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VT LMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTALMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|417700185|ref|ZP_12349333.1| modulator of DNA gyrase family protein [Shigella flexneri K-218]
gi|417705250|ref|ZP_12354325.1| modulator of DNA gyrase family protein [Shigella flexneri VA-6]
gi|417726138|ref|ZP_12374915.1| modulator of DNA gyrase family protein [Shigella flexneri K-304]
gi|417736429|ref|ZP_12385061.1| modulator of DNA gyrase family protein [Shigella flexneri 2747-71]
gi|417746173|ref|ZP_12394688.1| modulator of DNA gyrase family protein [Shigella flexneri 2930-71]
gi|417830865|ref|ZP_12477400.1| modulator of DNA gyrase family protein [Shigella flexneri J1713]
gi|420329054|ref|ZP_14830772.1| protein pmbA [Shigella flexneri K-1770]
gi|420344756|ref|ZP_14846210.1| protein pmbA [Shigella flexneri K-404]
gi|420377761|ref|ZP_14877331.1| protein pmbA [Shigella flexneri 1235-66]
gi|332749788|gb|EGJ80201.1| modulator of DNA gyrase family protein [Shigella flexneri 2747-71]
gi|332763142|gb|EGJ93385.1| modulator of DNA gyrase family protein [Shigella flexneri 2930-71]
gi|333009443|gb|EGK28899.1| modulator of DNA gyrase family protein [Shigella flexneri K-218]
gi|333010251|gb|EGK29684.1| modulator of DNA gyrase family protein [Shigella flexneri VA-6]
gi|333012007|gb|EGK31392.1| modulator of DNA gyrase family protein [Shigella flexneri K-304]
gi|335572806|gb|EGM59177.1| modulator of DNA gyrase family protein [Shigella flexneri J1713]
gi|391260409|gb|EIQ19467.1| protein pmbA [Shigella flexneri K-404]
gi|391261892|gb|EIQ20937.1| protein pmbA [Shigella flexneri K-1770]
gi|391294355|gb|EIQ52582.1| protein pmbA [Shigella flexneri 1235-66]
Length = 446
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + + L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPNLDLFHPAEVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|418464895|ref|ZP_13035834.1| PmbA protein [Aggregatibacter actinomycetemcomitans RhAA1]
gi|359756850|gb|EHK91007.1| PmbA protein [Aggregatibacter actinomycetemcomitans RhAA1]
Length = 453
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 177/461 (38%), Positives = 286/461 (62%), Gaps = 12/461 (2%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDM---LNYAKKIGASHSSIEFNEGNGFSVFVRKGKID 57
M+Q +S + + E QQL + + A+K GA+ + + + G SV R +I+
Sbjct: 1 MQQKTLEKSTALLRQQE-QQLRDAVSLAIEIAQKAGAT-AEVGVTKSGGLSVSTRLREIE 58
Query: 58 VIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLP 117
+E NND + + +Y+ K GN+STSD ++ T+ AA IA++T+ D+ GL
Sbjct: 59 NVEFNNDGALGISVYLGQQK----GNASTSDLTPDAIKSTVEAALAIAKYTSPDDCTGLA 114
Query: 118 DENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLL 177
D++ + + D LY + +D A +A E A + IVN+E +
Sbjct: 115 DKDLMAFDAPDLALYHAAEIEVDHAVQLALETEKAALEHDVRIVNSEGASFNAHTGVRVY 174
Query: 178 ANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTIS 237
NSHG + Y S++ +S S IA ++++RD Y+ D +L QP+ +G +AA++ I+
Sbjct: 175 GNSHGMLQSYLSSRYSLSCSVIAEHNEQLERDYEYTVARDITQLAQPKWVGEHAAQKAIA 234
Query: 238 RLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQII 297
RL+ +K++T++ PV+F +A L++ A ISG+SLYRK++FL+D LGK++ I+
Sbjct: 235 RLQPQKLATQQAPVIFLNDVATGLISHLAAAISGSSLYRKASFLLDHLGKQVLPDWFDIV 294
Query: 298 EDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLI 357
E PH++G S+ FD+EGV+TQ +++NGI+Q Y L++YS +KLGM++ G++GG H+ +
Sbjct: 295 EKPHLIGQLASTPFDSEGVRTQDMDIIRNGILQTYLLTSYSGRKLGMQSNGHAGGIHNWL 354
Query: 358 IISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEE 417
+ K SS L +L++M+ GLLVTE+MG G+N ++GDYS+GA G+W+ENG IQY V E
Sbjct: 355 V---KANSSGKLTALLRQMDRGLLVTEVMGQGVNPVSGDYSRGAAGFWVENGAIQYPVAE 411
Query: 418 ITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
ITI+G+L M + IVA+G D+ R++ +GSIL+ENM I+G
Sbjct: 412 ITIAGQLPEMLRNIVAVGDDIEHRSNIQTGSILLENMKISG 452
>gi|444335179|ref|ZP_21150492.1| PmbA protein [Aggregatibacter actinomycetemcomitans serotype a str.
A160]
gi|443549331|gb|ELT58208.1| PmbA protein [Aggregatibacter actinomycetemcomitans serotype a str.
A160]
Length = 414
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/413 (41%), Positives = 265/413 (64%), Gaps = 7/413 (1%)
Query: 46 GFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIA 105
G SV R +I+ +E NND + + +Y+ K GN+STSD ++ T+ AA IA
Sbjct: 8 GLSVSTRLREIENVEFNNDGALGISVYLGQQK----GNASTSDLTPDAIKSTVEAALAIA 63
Query: 106 RFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNEN 165
++T+ D+ AGL D++ + + D LY + +D A +A E A N+ IVN+E
Sbjct: 64 KYTSPDDCAGLADKDLMAFDAPDLALYHAAEIEVDHAMQLALETEKAALEHNARIVNSEG 123
Query: 166 TGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPE 225
+ NSHG + Y S++ +S S IA +++RD Y+ D +L QP+
Sbjct: 124 ASFNAHTGVRVYGNSHGMLQSYLSSRYSLSCSVIAEHQTQLERDYEYTVARDMTQLAQPK 183
Query: 226 IIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSL 285
+G +AA++ I+RL+ +K++T++ PV+F +A L++ A ISG SLYRK++FL+D L
Sbjct: 184 WVGEHAAQKAIARLQPQKLATQQAPVIFLNDVATGLISHLATAISGGSLYRKASFLLDHL 243
Query: 286 GKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMK 345
K++ +I+E PH+LG S+ FD+EGVKTQ +++NGI+Q Y L++YS +KLGM+
Sbjct: 244 DKQVLPDWFEIVERPHLLGQLASTPFDSEGVKTQDMDIIRNGILQTYLLTSYSGRKLGMQ 303
Query: 346 TTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYW 405
+ G++GG H+ ++ K SS L +L++MN GLLVTE+MG G+N ++GDYS+GA G+W
Sbjct: 304 SNGHAGGIHNWLV---KANSSGKLTALLRQMNRGLLVTEVMGQGVNPVSGDYSRGAAGFW 360
Query: 406 IENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+ENG+IQY V EITI+G+L M + IVA+G D+ R++ +GSIL+ENM I+G
Sbjct: 361 VENGEIQYPVAEITIAGQLPEMLRNIVAVGDDIEHRSNIQTGSILLENMKISG 413
>gi|300821338|ref|ZP_07101486.1| TldD/PmbA family protein [Escherichia coli MS 119-7]
gi|331680372|ref|ZP_08381031.1| protein PmbA [Escherichia coli H591]
gi|300526227|gb|EFK47296.1| TldD/PmbA family protein [Escherichia coli MS 119-7]
gi|331071835|gb|EGI43171.1| protein PmbA [Escherichia coli H591]
Length = 450
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 265/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPADVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VT LMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTALMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|418944973|ref|ZP_13497930.1| peptidase PmbA [Escherichia coli O157:H43 str. T22]
gi|375319716|gb|EHS65804.1| peptidase PmbA [Escherichia coli O157:H43 str. T22]
Length = 446
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 265/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPADVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VT LMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTALMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|410624629|ref|ZP_11335425.1| PmbA protein [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410155916|dbj|GAC30799.1| PmbA protein [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 443
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 180/443 (40%), Positives = 273/443 (61%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+E Q + D L A + GA+ + ++ G +V R +++ +E ND + + +++
Sbjct: 8 AEIQNVVDDALRLAIQKGATAAEASMSKVQGIAVSSRLKEVETVEFTNDGGLGIAVFV-- 65
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
GK+ G++ST+D +L T+ A IA++T D+ AG+ D+ + D LY P
Sbjct: 66 GKRK--GSASTTDLSPAALRLTVEKAVEIAKYTNEDDCAGIADKEFMATEIPDLDLYHPI 123
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L + +A E +++ I+N++ + N+HG +GY S++ +S
Sbjct: 124 ELDTEVGIKMAIETETAGMDYDPKIINSDGASYNANLGVRVYGNTHGINAGYASSRYNLS 183
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
IA +G +MQR+ Y+ N + LD +G AAK T+SRL AKKI+T K PVLF
Sbjct: 184 CVLIAQEGDDMQRNYSYTMNREAHLLDSAYKVGVDAAKETLSRLGAKKINTAKVPVLFHR 243
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A + F ISG SLYR+S+FL+DSLG K+F + I E PH++ SS FDNEG
Sbjct: 244 DVASGIFGHFVSAISGGSLYRQSSFLLDSLGTKVFPEWLTINEKPHVMKGLASSPFDNEG 303
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+TQ +V++G++Q Y L++YSA+KL M+T G++GG H+ ++ S T SD KE+L+K
Sbjct: 304 VRTQDMTIVESGMLQHYLLTSYSARKLKMQTNGHAGGIHNWLLSS--TGESD--KELLEK 359
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGL+VTELMG G+N + GDYS+GA G+W+ENG IQY V EITI+G L++MF+ IVAIG
Sbjct: 360 MGTGLIVTELMGQGVNIVNGDYSRGAAGFWVENGIIQYPVHEITIAGNLKDMFQNIVAIG 419
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
++ R+S +GSILIE+M +AG
Sbjct: 420 AETEHRSSIQTGSILIESMQVAG 442
>gi|424935391|ref|ZP_18353763.1| Peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|407809578|gb|EKF80829.1| Peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
Length = 450
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/453 (38%), Positives = 275/453 (60%), Gaps = 11/453 (2%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHS---SIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
K I ++ ++ ++ + A ++ A S + ++ G V R G+++ +E N+D
Sbjct: 6 KVISQVAQQRKTLEEAVTTALELAAGKSDGAEVSVSKTTGIGVSTRYGEVENVEFNSDGA 65
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +Y Q+ K G++S++D +++ T+ AA +IAR+T+ D FAG+ D++ L +
Sbjct: 66 LGITVYHQNRK----GSASSTDLSPEAIARTVQAALDIARYTSPDPFAGVADKDLLAFDA 121
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D L+ P +S DDA +A R E A + I N E + + NSHG +
Sbjct: 122 PDLDLFHPAEVSPDDAIELAARAEQAALKADKRITNTEGGSFNSHYGIKVFGNSHGMLQS 181
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
Y ++H +S IA +M+RD Y+ + L PE +G A+RT+SRL +K+ST
Sbjct: 182 YCSTRHSLSSCVIAEDDGDMERDYAYTIGRAIEDLQSPEWVGEECARRTLSRLAPRKLST 241
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
K PV+F +A L I+G ++YRKSTFL+DSLGK+I + I E PH+L
Sbjct: 242 MKAPVIFANEVATGLFGHLVGAIAGGAVYRKSTFLLDSLGKQILPEWLTIEEHPHLLKGL 301
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
S+ FD+EGV+T++R +VK+G++ + L+ YSA+KLGMK+TG++GG H+ I
Sbjct: 302 ASTPFDSEGVRTERRDIVKDGVLTQWLLTNYSARKLGMKSTGHAGGIHNWRINGRGL--- 358
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+ +MLK+M TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L+
Sbjct: 359 -SFAKMLKEMGTGLVVTELMGQGVSGVTGDYSRGASGFWVENGEIQYPVSEITIAGNLKE 417
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ IV IG D+ TR++ GS+L+ M IAG+
Sbjct: 418 MWRNIVTIGDDIETRSNIQCGSVLLPEMKIAGQ 450
>gi|161505075|ref|YP_001572187.1| peptidase PmbA [Salmonella enterica subsp. arizonae serovar
62:z4,z23:- str. RSK2980]
gi|160866422|gb|ABX23045.1| hypothetical protein SARI_03209 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 473
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 263/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 59 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 114
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 115 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKA 174
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA +M+RD Y+
Sbjct: 175 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEDNGDMERDYAYTIGR 234
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PVLF +A L I+G ++YR
Sbjct: 235 AMADLQAPEWVGAECARRTLSRLAPRKLSTMKAPVLFANEVATGLFGHLVGAIAGGAVYR 294
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 295 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTN 354
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 355 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGD 410
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV++G D+ TR++ GS+L+ M I
Sbjct: 411 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVSVGDDIETRSNIQCGSVLLPEMKI 470
Query: 457 AGK 459
AG+
Sbjct: 471 AGQ 473
>gi|345297630|ref|YP_004826988.1| peptidase U62 modulator of DNA gyrase [Enterobacter asburiae LF7a]
gi|345091567|gb|AEN63203.1| peptidase U62 modulator of DNA gyrase [Enterobacter asburiae LF7a]
Length = 450
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 265/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D ++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPDAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 92 TVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 ALGDLQSPEWVGKECAERTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+G++ + L+
Sbjct: 272 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGVLTQWLLTN 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQMLKEMGTGLVVTELMGQGVSGITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|288550518|ref|ZP_05970755.2| PmbA protein [Enterobacter cancerogenus ATCC 35316]
gi|288314800|gb|EFC53738.1| PmbA protein [Enterobacter cancerogenus ATCC 35316]
Length = 450
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 264/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D ++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPDAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 92 TVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPADVTPDEAIEMAARAEQASLQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 ALGDLQSPEWVGAECAQRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+G++ + L+
Sbjct: 272 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGVLTQWLLTN 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQMLKEMGTGLVVTELMGQGVSGITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|386627204|ref|YP_006146932.1| putative peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Escherichia coli O7:K1 str.
CE10]
gi|349740940|gb|AEQ15646.1| putative peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Escherichia coli O7:K1 str.
CE10]
Length = 450
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 265/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPGLDLFHPAEVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|420377682|ref|ZP_14877264.1| protein pmbA [Shigella flexneri 1235-66]
gi|391294915|gb|EIQ53101.1| protein pmbA [Shigella flexneri 1235-66]
Length = 446
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D++ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKDLLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 AMGDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R ++K+G++ + L+
Sbjct: 268 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIIKDGVLTQWLLTN 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIPGQGL----SFEQLLKEMGTGLVVTELMGQGVSGITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|426407685|ref|YP_007027784.1| PmbA protein [Pseudomonas sp. UW4]
gi|426265902|gb|AFY17979.1| PmbA protein [Pseudomonas sp. UW4]
Length = 448
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/441 (39%), Positives = 270/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEARRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D + + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAKHTSEDEASGLADAALMARDLPDFDLFHQWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF +S I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEQALACEAAAFAADSRIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGNLLADPVSIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG SLYRKS+FL +LG+K+F + I E PH++ + GS++FD +G+
Sbjct: 251 AGGLFGSFLSAISGGSLYRKSSFLEGTLGQKLFPEWLTIDERPHLMRAMGSAAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TYS +KLGM +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVEKGELVSYILGTYSGRKLGMPSTANAGGVHNLFV----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGQGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|389683040|ref|ZP_10174372.1| PmbA protein [Pseudomonas chlororaphis O6]
gi|388552553|gb|EIM15814.1| PmbA protein [Pseudomonas chlororaphis O6]
Length = 448
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 271/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D + + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAKHTSEDESSGLADAALMARDVPDFDLFHAWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF +S I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIERALACEAAAFAADSRIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGHLLTDPVTIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL +LG+++F + I E PH++ + GSS+FD +G+
Sbjct: 251 AGGLFGSFLGAISGGNLYRKSSFLEGALGQRLFPEWLTIDERPHLMRALGSSAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y L TYS +KLG+ +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVENGELVSYVLGTYSGRKLGLPSTANAGGVHNLFV----THGEEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MFKQI+A+G+D
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFKQIIAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|205355174|ref|YP_002228975.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207859565|ref|YP_002246216.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|375126082|ref|ZP_09771246.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|205274955|emb|CAR40025.1| putative PmbA protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|206711368|emb|CAR35746.1| putative PmbA protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|326630332|gb|EGE36675.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
Length = 450
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 263/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 212 AMADLQAPEWVGAECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 272 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLMQWLLTN 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|339493005|ref|YP_004713298.1| PmbA protein [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338800377|gb|AEJ04209.1| PmbA protein [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 448
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 178/442 (40%), Positives = 275/442 (62%), Gaps = 8/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++ + ++ A++ GAS S + + G S VR+G+++ +E N D+ + +Y+ K
Sbjct: 15 LREKVERIIEEARRQGASASEVSVSMEQGLSTTVRQGEVETVEFNRDQGFGITLYVGQSK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST+ +++ +T+ AA IAR + D FAGL D + D LY PW +
Sbjct: 75 ----GSASTTGSGDEAIRETVAAALAIARHASQDEFAGLADATLMARELPDLDLYHPWSI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE+ AF+F++ I N + T + T Q NS+GF+ GY ++H +S
Sbjct: 131 TPEQAIEQALSCESAAFDFDARIRNADGTSLNTHQGCRAYGNSNGFIGGYCSTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD +Y N + L P+ IG AA+R + RL A+ I T + PVLF L
Sbjct: 191 MIAESEGQMQRDYFYDVNRIGEALIDPQTIGRRAAERAVRRLGARPIPTCEVPVLFAPEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L + F ISG +LYRK+++L D+LG+ +F + + E PHI + GS+S+D +G+
Sbjct: 251 ATGLFSHFIAAISGGNLYRKASYLEDALGQTLFPEWLSLDERPHIPRALGSASYDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y LSTYS +KLGM +T N+GG H+L + + ++ +L++M
Sbjct: 311 TYAKPFVENGRLISYVLSTYSGRKLGMPSTANAGGVHNLFV----SHGEEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ+ V+E+TI+G L++MF+QIVAIG D
Sbjct: 367 RGLLVTELMGQGLNLVTGDYSRGAGGYWVENGEIQFPVQEVTIAGNLRDMFRQIVAIGCD 426
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
+ TR + +GS+LIE M++AGK
Sbjct: 427 IETRGNVRTGSVLIERMMVAGK 448
>gi|379703675|ref|YP_005245403.1| Protein pmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|62130495|gb|AAX68198.1| putative peptide maturation protein, maturation of antibiotic
MccB17, see tld genes [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|323132774|gb|ADX20204.1| Protein pmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
Length = 473
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 263/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 59 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 114
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 115 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKA 174
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 175 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 234
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 235 AMADLQAPEWVGAECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 294
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 295 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTN 354
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 355 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGD 410
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR++ GS+L+ M I
Sbjct: 411 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKI 470
Query: 457 AGK 459
AG+
Sbjct: 471 AGQ 473
>gi|357417912|ref|YP_004930932.1| PmbA protein [Pseudoxanthomonas spadix BD-a59]
gi|355335490|gb|AER56891.1| PmbA protein [Pseudoxanthomonas spadix BD-a59]
Length = 453
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 265/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+L++ +L A+ GAS + + +E G SV VR G+++ +E D+ + V +Y K
Sbjct: 19 LAELSERLLAMARSRGASQAEVSCSEDFGLSVNVRMGEVETVESTQDRAIGVTVYFGQRK 78
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST D ++SL T+ A IAR+T D AGL D + D + PW L
Sbjct: 79 ----GSASTGDLREESLAATVEQACAIARYTEDDPAAGLADPQRMAREFPDLGGWHPWQL 134
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A +A CE + ++ + N++ V++ + ANSHGF+ + H IS +
Sbjct: 135 DADAAVDLALACEAAGRDADARVRNSDGASVSSSHGLSVYANSHGFVGRERGTHHSISCA 194
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA G+ MQRD WYS+ ++L+ PE IG AA+RT++RL ++++T + PVL+ A +
Sbjct: 195 LIAGTGEGMQRDGWYSTALARERLEAPEAIGRRAAQRTVARLGPRELATGQYPVLYSAEV 254
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYRK++FL+D G++IF I E P + S +FD EGV
Sbjct: 255 ARSLIGHLLGAVSGGALYRKASFLLDHAGRQIFPDWFSIEERPLLREGLRSGAFDAEGVA 314
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T +V G++Q Y L +YSA+KLG+ +TGN+GG H+L + +N + +L MLK M
Sbjct: 315 TADSALVSRGVLQRYVLGSYSARKLGLSSTGNAGGIHNLEVAAN----AGDLTTMLKDMG 370
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGLLVTELMG G+N +TGDYS+GA G+WIENG+I Y V+ +T++G L+++F I A+GSD
Sbjct: 371 TGLLVTELMGQGVNPVTGDYSRGAGGFWIENGQIAYPVDNVTVAGNLKDIFAAIEAVGSD 430
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ GS+L+ M +AG
Sbjct: 431 VDRRSHIGIGSVLVGRMTVAG 451
>gi|378957963|ref|YP_005215450.1| putative PmbA protein [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|421360037|ref|ZP_15810324.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421362136|ref|ZP_15812391.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421366461|ref|ZP_15816665.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421372759|ref|ZP_15822906.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421377463|ref|ZP_15827558.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421380176|ref|ZP_15830239.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421385526|ref|ZP_15835547.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421389126|ref|ZP_15839110.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421394011|ref|ZP_15843954.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421399932|ref|ZP_15849823.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421402767|ref|ZP_15852624.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421407318|ref|ZP_15857126.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421414612|ref|ZP_15864352.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421416247|ref|ZP_15865967.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421420395|ref|ZP_15870072.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421427273|ref|ZP_15876897.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421430328|ref|ZP_15879921.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421436171|ref|ZP_15885703.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421440800|ref|ZP_15890276.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|421445263|ref|ZP_15894689.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421450632|ref|ZP_15900006.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|436598053|ref|ZP_20512751.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|436756529|ref|ZP_20520345.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|436801328|ref|ZP_20524834.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|436806855|ref|ZP_20526969.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436813214|ref|ZP_20531499.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436839405|ref|ZP_20537710.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436850205|ref|ZP_20541263.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436859656|ref|ZP_20547542.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436866900|ref|ZP_20552329.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436868822|ref|ZP_20553424.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436881100|ref|ZP_20560699.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436889987|ref|ZP_20565653.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436898308|ref|ZP_20570319.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436903689|ref|ZP_20573958.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436913250|ref|ZP_20578817.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436917669|ref|ZP_20581177.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436925005|ref|ZP_20585479.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436937701|ref|ZP_20592828.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436944903|ref|ZP_20597313.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436948765|ref|ZP_20598919.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436959178|ref|ZP_20603629.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436973351|ref|ZP_20610614.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436984477|ref|ZP_20614430.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436989809|ref|ZP_20616715.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437001335|ref|ZP_20620910.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437017312|ref|ZP_20626369.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437034937|ref|ZP_20633258.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437041531|ref|ZP_20635491.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437047942|ref|ZP_20639217.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437060603|ref|ZP_20646449.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437068835|ref|ZP_20650849.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437077793|ref|ZP_20655651.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437083980|ref|ZP_20659547.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437089404|ref|ZP_20662200.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437105908|ref|ZP_20667048.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437124603|ref|ZP_20673573.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437128945|ref|ZP_20675571.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437137192|ref|ZP_20680260.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437144567|ref|ZP_20685038.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437151446|ref|ZP_20689253.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437164007|ref|ZP_20696985.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437167437|ref|ZP_20698708.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437185223|ref|ZP_20708819.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437197484|ref|ZP_20711210.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|437259093|ref|ZP_20716993.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437265438|ref|ZP_20720388.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437278030|ref|ZP_20727260.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437292173|ref|ZP_20731855.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437313106|ref|ZP_20736751.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437333573|ref|ZP_20742509.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437345423|ref|ZP_20746566.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437349024|ref|ZP_20747212.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437411833|ref|ZP_20753006.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437438660|ref|ZP_20756931.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437460431|ref|ZP_20761409.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437475522|ref|ZP_20766695.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437493142|ref|ZP_20771916.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437511374|ref|ZP_20777011.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437520446|ref|ZP_20778710.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437559156|ref|ZP_20785572.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437571358|ref|ZP_20788564.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437591169|ref|ZP_20794597.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437610675|ref|ZP_20800986.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437622674|ref|ZP_20804847.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437642660|ref|ZP_20808108.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437663146|ref|ZP_20813757.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437685424|ref|ZP_20819190.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437687819|ref|ZP_20819530.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437705741|ref|ZP_20825113.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437736485|ref|ZP_20832676.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|437753892|ref|ZP_20834083.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|437805675|ref|ZP_20839209.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437998223|ref|ZP_20854121.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|438088559|ref|ZP_20859849.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438109882|ref|ZP_20867733.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|438136703|ref|ZP_20874454.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|445127883|ref|ZP_21379875.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|445161838|ref|ZP_21393471.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|445260152|ref|ZP_21409730.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|445339934|ref|ZP_21416500.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445347730|ref|ZP_21419385.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445358079|ref|ZP_21422422.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|357208574|gb|AET56620.1| putative PmbA protein [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|395983671|gb|EJH92863.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395990806|gb|EJH99936.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|395991125|gb|EJI00250.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|395998784|gb|EJI07810.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|395999410|gb|EJI08431.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|396004162|gb|EJI13145.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396015924|gb|EJI24793.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396016356|gb|EJI25224.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396017738|gb|EJI26602.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396025711|gb|EJI34485.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396030738|gb|EJI39467.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396031173|gb|EJI39901.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396035303|gb|EJI43976.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396044423|gb|EJI53019.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396045535|gb|EJI54127.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396052768|gb|EJI61274.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396053531|gb|EJI62025.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396056420|gb|EJI64895.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396065566|gb|EJI73939.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396066015|gb|EJI74381.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|396066293|gb|EJI74658.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|434940456|gb|ELL47079.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|434958103|gb|ELL51679.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434968036|gb|ELL60800.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|434968811|gb|ELL61537.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434975639|gb|ELL67927.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434976677|gb|ELL68890.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|434980024|gb|ELL71966.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434987398|gb|ELL79038.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434987864|gb|ELL79475.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434994032|gb|ELL85416.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|435003462|gb|ELL94469.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|435004622|gb|ELL95585.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435006978|gb|ELL97837.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435013856|gb|ELM04478.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435017784|gb|ELM08261.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435024923|gb|ELM15128.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435031511|gb|ELM21483.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435035265|gb|ELM25112.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435037994|gb|ELM27777.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435040370|gb|ELM30126.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435053543|gb|ELM42980.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435054850|gb|ELM44270.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435055223|gb|ELM44642.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435064117|gb|ELM53262.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435070979|gb|ELM59938.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435075403|gb|ELM64223.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435075777|gb|ELM64590.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435082396|gb|ELM71020.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435085797|gb|ELM74344.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435091341|gb|ELM79740.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435092799|gb|ELM81141.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435099520|gb|ELM87727.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435102405|gb|ELM90509.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435107064|gb|ELM95061.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435115551|gb|ELN03318.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435119537|gb|ELN07140.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435121087|gb|ELN08633.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435127205|gb|ELN14567.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435135211|gb|ELN22321.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435138566|gb|ELN25591.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435140581|gb|ELN27542.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435144347|gb|ELN31188.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435151211|gb|ELN37863.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435160005|gb|ELN46314.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435165757|gb|ELN51783.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435172096|gb|ELN57641.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435177605|gb|ELN62921.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435181124|gb|ELN66206.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435182436|gb|ELN67449.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435187908|gb|ELN72651.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435190238|gb|ELN74832.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435203698|gb|ELN87435.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435212963|gb|ELN95909.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435215295|gb|ELN98001.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435221695|gb|ELO03963.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435223388|gb|ELO05422.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435224715|gb|ELO06665.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|435228279|gb|ELO09723.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435231259|gb|ELO12514.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435239577|gb|ELO20066.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435248429|gb|ELO28314.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435251737|gb|ELO31341.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435252105|gb|ELO31702.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435254763|gb|ELO34146.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435255459|gb|ELO34822.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435266571|gb|ELO45304.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435267282|gb|ELO45994.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435275501|gb|ELO53578.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435283083|gb|ELO60672.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435285218|gb|ELO62620.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|435292383|gb|ELO69151.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435301758|gb|ELO77757.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435311142|gb|ELO85417.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435317233|gb|ELO90284.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435332355|gb|ELP03315.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|435335974|gb|ELP06038.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|444855535|gb|ELX80580.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444868998|gb|ELX93600.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444872144|gb|ELX96505.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444876981|gb|ELY01140.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444886259|gb|ELY10020.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|444888683|gb|ELY12218.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
Length = 446
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 263/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 208 AMADLQAPEWVGAECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 268 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLMQWLLTN 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|375004339|ref|ZP_09728674.1| TldD/PmbA family protein [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|353073677|gb|EHB39442.1| TldD/PmbA family protein [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
Length = 473
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 263/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 59 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 114
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 115 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKA 174
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 175 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 234
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 235 AMADLQAPEWVGTECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 294
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 295 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTN 354
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 355 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGD 410
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR++ GS+L+ M I
Sbjct: 411 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKI 470
Query: 457 AGK 459
AG+
Sbjct: 471 AGQ 473
>gi|399009383|ref|ZP_10711820.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM17]
gi|398112605|gb|EJM02464.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM17]
Length = 448
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 271/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D + + DF L+ W +
Sbjct: 75 ----GSASTSASGPEAIRETVAAALAIAKHTSEDESSGLADAALMARDVPDFDLFHAWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF +S I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEQALACEAAAFAADSRIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGHLLTDPVTIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL +LG+++F + I E PH++ + GSS+FD +G+
Sbjct: 251 AGGLFGSFLGAISGGNLYRKSSFLEGALGQRLFPEWLTIDERPHLMRALGSSAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y L TYS +KLG+ +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVENGELVSYVLGTYSGRKLGLPSTANAGGVHNLFV----THGEEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MFKQI+A+G+D
Sbjct: 367 RGLLVTELMGHGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFKQIIAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|291085999|ref|ZP_06354596.2| PmbA protein [Citrobacter youngae ATCC 29220]
gi|291069107|gb|EFE07216.1| PmbA protein [Citrobacter youngae ATCC 29220]
Length = 473
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 174/452 (38%), Positives = 279/452 (61%), Gaps = 12/452 (2%)
Query: 12 IYSKSEFQQ-LAQDMLNYAKKIGASHS---SIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
+ S+ E Q+ + Q+ ++ A ++ + S + ++ G SV R G+++ +E N+D +
Sbjct: 30 VISQVEAQRKILQEAVSTALELASGKSDGAEVAVSKTTGISVSTRYGEVENVEFNSDGAL 89
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
+ +Y Q+ K G++S++D +++ T+ AA +IAR+T+ D AG+ D+ L +
Sbjct: 90 GITVYHQNRK----GSASSTDLSPQAIARTVQAALDIARYTSPDPCAGVADKELLAFDAP 145
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ P +S D+A +A R E A + I N E + + NSHG + GY
Sbjct: 146 DLDLFHPAEVSPDEAIELAARAEQAALQADKRITNTEGGSFNSHYGIKVFGNSHGMLQGY 205
Query: 188 PFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTR 247
++H +S IA + +M+RD Y+ L PE +G A+RT+SRL +K+ST
Sbjct: 206 CSTRHSLSSCVIAEENGDMERDYAYTIGRAMGDLQTPEWVGADCARRTLSRLSPRKLSTM 265
Query: 248 KCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFG 307
K PV+F +A L I+G S+YRKSTFL+DSLGK+I + I E PH+L
Sbjct: 266 KAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFLLDSLGKQILPEWLTIEEHPHLLKGLA 325
Query: 308 SSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD 367
SS FD+EGV+T++R ++K+G++ + L+ YSA+KLG+K+TG++GG H+ I
Sbjct: 326 SSPFDSEGVRTERRDIIKDGVLTQWLLTNYSARKLGLKSTGHAGGIHNWRIPGQGL---- 381
Query: 368 NLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNM 427
+ +++LK+M TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L+ M
Sbjct: 382 SFEQLLKEMGTGLVVTELMGQGVSGITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKEM 441
Query: 428 FKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++ IV +G+D+ TR++ GS+L+ M IAG+
Sbjct: 442 WRNIVTVGNDIETRSNIQCGSVLLPEMKIAGQ 473
>gi|398992884|ref|ZP_10695843.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM21]
gi|398135961|gb|EJM25062.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM21]
Length = 448
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 177/441 (40%), Positives = 269/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS ++ +T+ AA IA+ T+ D +GL D + + DF L+ W +
Sbjct: 75 ----GSASTSASGPDAIRETVAAALAIAKHTSEDEASGLADAALMARDLQDFDLFHQWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF +S I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEQALACEAAAFATDSRIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGNLLADPVSIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG SLYRKS+FL +LG+K+F + I E PH++ + GSS+FD +G+
Sbjct: 251 AGGLFGSFLSAISGGSLYRKSSFLEGTLGQKLFPEWLTIDERPHLMRAMGSSAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TYS +KLGM +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVEKGELVSYILGTYSGRKLGMPSTANAGGVHNLFV----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MFKQI+A+G+D
Sbjct: 367 RGLLVTELMGQGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFKQIIAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|312881962|ref|ZP_07741719.1| peptidase PmbA [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370398|gb|EFP97893.1| peptidase PmbA [Vibrio caribbenthicus ATCC BAA-2122]
Length = 447
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 180/441 (40%), Positives = 276/441 (62%), Gaps = 13/441 (2%)
Query: 21 LAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMF 80
+A+ + AKK A+ +I ++ G SV R +++ +E N+D + + +Y K
Sbjct: 18 VAKALEMAAKKSDAAEVAI--SKSTGLSVSTRMCEVENVEFNSDGALGITVYRNQRK--- 72
Query: 81 YGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSID 140
G++STSD ++++ T++AA +IA++T+ D FAG E + D L+ P D
Sbjct: 73 -GSASTSDLSEEAIKQTVDAALDIAQYTSQDPFAGPAPEELMVGEIPDLDLFHPDSPDPD 131
Query: 141 DAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIA 200
A +A E +A +F I ++ + + NSHG ++ Y S+H S I
Sbjct: 132 YAAQVAIAAEQKALSFGDKIKQSDGASYDSHYGVKVYGNSHGLLASYASSRHSTSCCVIG 191
Query: 201 IKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLA 258
+G+ EM+RD Y+ +L PE +G AA++TI+RL A+K+ T + PV+F A +A
Sbjct: 192 -QGQNGEMERDYSYTIARHKDELWSPEQVGLTAAEKTINRLDARKLKTGQYPVIFAADVA 250
Query: 259 FELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKT 318
LL ISG +LYRKSTFL+D LGK +F + +QI E PHIL S+ FD+EGV+T
Sbjct: 251 TGLLGHLVMAISGGNLYRKSTFLLDHLGKDVFPAWLQISERPHILRGLASTPFDSEGVRT 310
Query: 319 QKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNT 378
+ R ++ +G++ Y L++YSA+KLGM TG++GG H+ I S + N +ML ++NT
Sbjct: 311 ENREIITDGVLASYLLTSYSARKLGMSPTGHAGGIHNWFINS----TGQNFTQMLSELNT 366
Query: 379 GLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDV 438
GL+VTE+MG G+N +TGDYS+GA G+W+ENG+IQ+ V EITI+G L++MFKQIVA+GSDV
Sbjct: 367 GLVVTEVMGQGVNVVTGDYSRGAAGFWVENGEIQFPVSEITIAGNLKDMFKQIVAVGSDV 426
Query: 439 LTRNSNTSGSILIENMIIAGK 459
TR+ +GSIL+E+M +AG+
Sbjct: 427 ETRSQIQTGSILLESMKVAGE 447
>gi|418260518|ref|ZP_12882989.1| modulator of DNA gyrase family protein [Shigella flexneri 6603-63]
gi|397893171|gb|EJL09631.1| modulator of DNA gyrase family protein [Shigella flexneri 6603-63]
Length = 446
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 265/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G+ S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSVSSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + + L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPNLDLFHPAEVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 268 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|418808051|ref|ZP_13363608.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21550]
gi|418811785|ref|ZP_13367310.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22513]
gi|418834036|ref|ZP_13388947.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM N1543]
gi|418848650|ref|ZP_13403388.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 37978]
gi|392777880|gb|EJA34562.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22513]
gi|392778352|gb|EJA35032.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21550]
gi|392805944|gb|EJA62059.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM N1543]
gi|392822950|gb|EJA78754.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 37978]
Length = 450
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 263/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLNLFHPAEVTPDEAIELAARAEQASLKA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 212 AMADLQAPEWVGAECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 272 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTN 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|167991220|ref|ZP_02572319.1| protein PmbA [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168234560|ref|ZP_02659618.1| protein PmbA [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194448690|ref|YP_002048461.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194737508|ref|YP_002117358.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195873671|ref|ZP_02698593.2| protein PmbA [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197263170|ref|ZP_03163244.1| protein PmbA [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|198245735|ref|YP_002218301.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|200387898|ref|ZP_03214510.1| protein PmbA [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|205357122|ref|ZP_02345068.2| protein PmbA [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205359318|ref|ZP_02669014.2| protein PmbA [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205360567|ref|ZP_02684497.2| protein PmbA [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|213053343|ref|ZP_03346221.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Typhi
str. E00-7866]
gi|213427676|ref|ZP_03360426.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Typhi
str. E02-1180]
gi|213581162|ref|ZP_03362988.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Typhi
str. E98-0664]
gi|213649724|ref|ZP_03379777.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Typhi
str. J185]
gi|213865364|ref|ZP_03387483.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Typhi
str. M223]
gi|374982640|ref|ZP_09723961.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
PMID [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|378962654|ref|YP_005220140.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Typhi
str. P-stx-12]
gi|378987105|ref|YP_005250261.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|386589736|ref|YP_006086136.1| TldE/PmbA proteolytic complex [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|416519706|ref|ZP_11740021.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416563908|ref|ZP_11762968.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|417370175|ref|ZP_12141120.1| TldE/PmbA protein [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|417395231|ref|ZP_12157156.1| TldE/PmbA protein [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
gi|418762418|ref|ZP_13318547.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35185]
gi|418775182|ref|ZP_13331142.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 33953]
gi|418778676|ref|ZP_13334584.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35188]
gi|418785270|ref|ZP_13341103.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21559]
gi|418790145|ref|ZP_13345922.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19447]
gi|418793014|ref|ZP_13348750.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19449]
gi|418796259|ref|ZP_13351951.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19567]
gi|418802827|ref|ZP_13358452.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35202]
gi|418843791|ref|ZP_13398586.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19443]
gi|418859887|ref|ZP_13414476.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19470]
gi|418865633|ref|ZP_13420109.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19536]
gi|418866221|ref|ZP_13420685.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 4176]
gi|419730989|ref|ZP_14257913.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419732685|ref|ZP_14259590.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419741530|ref|ZP_14268220.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419745721|ref|ZP_14272342.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419750129|ref|ZP_14276597.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|421571646|ref|ZP_16017316.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421576451|ref|ZP_16022048.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421577942|ref|ZP_16023525.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421584938|ref|ZP_16030442.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|421886481|ref|ZP_16317655.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|422028679|ref|ZP_16374974.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422033728|ref|ZP_16379792.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427557850|ref|ZP_18930297.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427575862|ref|ZP_18934887.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427597500|ref|ZP_18939805.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427621898|ref|ZP_18944689.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427646113|ref|ZP_18949575.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427658687|ref|ZP_18954292.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427663966|ref|ZP_18959204.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427682037|ref|ZP_18964092.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|427802170|ref|ZP_18969612.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|437827359|ref|ZP_20844033.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|445139382|ref|ZP_21384259.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Dublin
str. SL1438]
gi|445153020|ref|ZP_21391152.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Dublin
str. HWS51]
gi|194406994|gb|ACF67213.1| protein PmbA [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194713010|gb|ACF92231.1| protein PmbA [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195632715|gb|EDX51169.1| protein PmbA [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197241425|gb|EDY24045.1| protein PmbA [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197291719|gb|EDY31069.1| protein PmbA [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197940251|gb|ACH77584.1| protein PmbA [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|199604996|gb|EDZ03541.1| protein PmbA [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|205323908|gb|EDZ11747.1| protein PmbA [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205330370|gb|EDZ17134.1| protein PmbA [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205337050|gb|EDZ23814.1| protein PmbA [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205348914|gb|EDZ35545.1| protein PmbA [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|312915534|dbj|BAJ39508.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321222594|gb|EFX47666.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
PMID [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|353582440|gb|EHC43087.1| TldE/PmbA protein [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353602847|gb|EHC58091.1| TldE/PmbA protein [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
gi|363557467|gb|EHL41673.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363571452|gb|EHL55363.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|374356526|gb|AEZ48287.1| Peptidase PmbA [Salmonella enterica subsp. enterica serovar Typhi
str. P-stx-12]
gi|379983877|emb|CCF89928.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|381291303|gb|EIC32552.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381292119|gb|EIC33323.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381302443|gb|EIC43482.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381305071|gb|EIC46015.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|381307838|gb|EIC48687.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|383796780|gb|AFH43862.1| TldE/PmbA proteolytic complex [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|392736454|gb|EIZ93617.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35185]
gi|392748980|gb|EJA05959.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 33953]
gi|392752367|gb|EJA09308.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21559]
gi|392754883|gb|EJA11798.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35188]
gi|392758528|gb|EJA15394.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19447]
gi|392766044|gb|EJA22827.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19449]
gi|392771128|gb|EJA27849.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19567]
gi|392776224|gb|EJA32912.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35202]
gi|392815840|gb|EJA71771.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19443]
gi|392827536|gb|EJA83239.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19536]
gi|392828760|gb|EJA84451.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19470]
gi|392840735|gb|EJA96270.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 4176]
gi|402518019|gb|EJW25405.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402520371|gb|EJW27724.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402525894|gb|EJW33177.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402530440|gb|EJW37657.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|414010980|gb|EKS94958.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414011906|gb|EKS95844.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414012435|gb|EKS96354.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414026309|gb|EKT09583.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414027044|gb|EKT10296.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414029778|gb|EKT12934.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414040413|gb|EKT23036.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414041232|gb|EKT23813.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414045691|gb|EKT28064.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414054672|gb|EKT36609.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|414059473|gb|EKT41048.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|435305020|gb|ELO80592.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|444853339|gb|ELX78410.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Dublin
str. HWS51]
gi|444854016|gb|ELX79082.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Dublin
str. SL1438]
Length = 446
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 263/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 208 AMADLQAPEWVGAECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 268 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTN 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|416496046|ref|ZP_11728953.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416525992|ref|ZP_11742046.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416592212|ref|ZP_11779033.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416615553|ref|ZP_11793465.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416644122|ref|ZP_11806505.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416770279|ref|ZP_11871631.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|322656768|gb|EFY53056.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322672691|gb|EFY68802.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322684501|gb|EFY80505.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323201575|gb|EFZ86639.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323270204|gb|EGA53652.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|363558057|gb|EHL42250.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
Length = 450
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 263/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 212 AMADLQAPEWVGTECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 272 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTN 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|16763238|ref|NP_458855.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Typhi
str. CT18]
gi|16767684|ref|NP_463299.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|29144717|ref|NP_808059.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|56416210|ref|YP_153285.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|162139499|ref|YP_219279.2| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|197365133|ref|YP_002144770.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|289829254|ref|ZP_06546866.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Typhi
str. E98-3139]
gi|375117218|ref|ZP_09762388.1| Protein pmbA [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|375121840|ref|ZP_09767007.1| Protein pmbA [Salmonella enterica subsp. enterica serovar Dublin
str. SD3246]
gi|378447747|ref|YP_005235379.1| putative PmbA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378453399|ref|YP_005240759.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|378702274|ref|YP_005184232.1| putative PmbA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378991701|ref|YP_005254865.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|383499002|ref|YP_005399691.1| PmbA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|416506397|ref|ZP_11734615.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|418767560|ref|ZP_13323624.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35199]
gi|418770728|ref|ZP_13326749.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21539]
gi|419790050|ref|ZP_14315726.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. Levine 1]
gi|419792608|ref|ZP_14318243.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. Levine 15]
gi|25305245|pir||AE1056 probable PmbA protein pmbA [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16423002|gb|AAL23258.1| putative peptide maturation protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16505546|emb|CAD06898.1| putative PmbA protein [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29140356|gb|AAO71919.1| putative PmbA protein [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|56130467|gb|AAV79973.1| putative PmbA protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197096610|emb|CAR62224.1| putative PmbA protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|261249526|emb|CBG27391.1| putative PmbA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267996778|gb|ACY91663.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301160923|emb|CBW20455.1| PmbA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|322717364|gb|EFZ08935.1| Protein pmbA [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|326626107|gb|EGE32452.1| Protein pmbA [Salmonella enterica subsp. enterica serovar Dublin
str. SD3246]
gi|332991248|gb|AEF10231.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|363554995|gb|EHL39227.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|380465823|gb|AFD61226.1| putative PmbA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|392614474|gb|EIW96921.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. Levine 1]
gi|392618567|gb|EIX00967.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. Levine 15]
gi|392734852|gb|EIZ92033.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35199]
gi|392737322|gb|EIZ94483.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21539]
Length = 450
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 263/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 212 AMADLQAPEWVGAECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 272 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTN 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|283786912|ref|YP_003366777.1| modulator of DNA gyrase [Citrobacter rodentium ICC168]
gi|282950366|emb|CBG90014.1| putative modulator of DNA gyrase [Citrobacter rodentium ICC168]
Length = 450
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 263/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVSVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E +
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEISPDEAIELAARAEQASLQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY S+H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSSRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 ALGDLQSPEWVGAECARRTLSRLAPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+ SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 272 KSTFLLDSLGKQILPEWLTIEEHPHLRKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTN 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSGITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|168232770|ref|ZP_02657828.1| protein PmbA [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|194470463|ref|ZP_03076447.1| protein PmbA [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194456827|gb|EDX45666.1| protein PmbA [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|205333003|gb|EDZ19767.1| protein PmbA [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
Length = 446
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 263/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 208 AIADLQAPEWVGAECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 268 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTN 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|417330691|ref|ZP_12115197.1| TldE/PmbA protein [Salmonella enterica subsp. enterica serovar
Adelaide str. A4-669]
gi|353561323|gb|EHC28292.1| TldE/PmbA protein [Salmonella enterica subsp. enterica serovar
Adelaide str. A4-669]
Length = 450
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 263/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 212 AIADLQAPEWVGAECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 272 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTN 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|119944888|ref|YP_942568.1| C69 family peptidase [Psychromonas ingrahamii 37]
gi|119863492|gb|ABM02969.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Psychromonas ingrahamii 37]
Length = 441
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 179/450 (39%), Positives = 275/450 (61%), Gaps = 10/450 (2%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
I K + + + L +A+++G + + + + G SV R G+++ IE N+D M +
Sbjct: 1 MIEQKQQLENAVNEALTFAQQLGVNQAEVALGKATGISVNTRLGEVENIEFNHDGAMGIS 60
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ K G++ST+D ++++ ++ AA +IA+FT+ D F+GL D LE NPLD
Sbjct: 61 VYVNQCK----GSASTADLSLEAIHSSVKAAVDIAKFTSKDPFSGLLDPEFLEKNPLDLD 116
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY P + ++ +A CE A + +S IVN++ + S + N++GF+ Y S
Sbjct: 117 LYHPCNYTTEEFLAVAKECEEIALSSDSRIVNSDGAAFNSHSSLKVYGNTNGFLHSYATS 176
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+H +S IA + +EMQR+ Y+S D L + + AAKRT+ RL A KI T++
Sbjct: 177 RHSLSCVLIAKQQQEMQRNYSYTSGRDVNDLLSAKWVAEDAAKRTLDRLGATKIKTQESA 236
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F +A L ISG SLY+KS+FL+DSLG KIF +QI E PHI+ S+
Sbjct: 237 VIFAPEVATGLFGHLVGAISGMSLYKKSSFLLDSLGTKIFPEWMQISEHPHIMKGLASAP 296
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD-NL 369
+D EG KT +R +V++G++Q Y L Y+++K+ M++TG++GG H+ + K+ D +L
Sbjct: 297 YDQEGCKTIQRNIVESGVLQTYLLPGYASRKMKMESTGHAGGIHNWHV-----KTGDLDL 351
Query: 370 KEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFK 429
+ K+M TGL VTELMG G+N ++GDYS+GA G+WIENG I V EITI+G L+ MF
Sbjct: 352 PGLFKEMGTGLFVTELMGQGVNLVSGDYSRGASGFWIENGVIVCPVHEITIAGNLKEMFM 411
Query: 430 QIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
I AIG+D+ R+S +GSILI M IAG+
Sbjct: 412 GIEAIGNDIDPRSSLKTGSILINKMKIAGQ 441
>gi|395652433|ref|ZP_10440283.1| putative modulation of DNA gyrase-like protein [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 448
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/441 (39%), Positives = 271/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + +L AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQILAEAKRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D +GL D+ + + DF L+ W +
Sbjct: 75 ----GSASTSASGAEAIRETVAAALAIAKHTSEDESSGLADKALMAKDLQDFDLFHAWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF+ ++ I N + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEQALICEAAAFDADARIKNADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGDLLADPVSIGRRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL +LG+K+F + I E PH++ + GSS+FD +G+
Sbjct: 251 AGGLFGSFLGAISGGNLYRKSSFLEGALGQKLFPEWLTIDERPHLMRAMGSSAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TY+ +KLG+ +T NSGG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVEKGELVSYVLGTYAGRKLGLPSTANSGGVHNLFV----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGQGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|152973103|ref|YP_001338249.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|238892714|ref|YP_002917448.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
gi|262045334|ref|ZP_06018359.1| peptide maturation protein PmbA [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330016537|ref|ZP_08308491.1| protein PmbA [Klebsiella sp. MS 92-3]
gi|386032820|ref|YP_005952733.1| peptidase PmbA [Klebsiella pneumoniae KCTC 2242]
gi|419976529|ref|ZP_14491924.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|419980493|ref|ZP_14495777.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|419988568|ref|ZP_14503650.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|419992379|ref|ZP_14507335.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|420000175|ref|ZP_14514923.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|420003650|ref|ZP_14518294.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|420009556|ref|ZP_14524038.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|420015627|ref|ZP_14529926.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|420021060|ref|ZP_14535243.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|424828624|ref|ZP_18253352.1| protein PmbA [Klebsiella pneumoniae subsp. pneumoniae Ecl8]
gi|150957952|gb|ABR79982.1| maturation of antibiotic MccB17 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238545030|dbj|BAH61381.1| putative antibiotic maturation protein [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|259037390|gb|EEW38636.1| peptide maturation protein PmbA [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328528679|gb|EGF55642.1| protein PmbA [Klebsiella sp. MS 92-3]
gi|339759948|gb|AEJ96168.1| peptidase PmbA [Klebsiella pneumoniae KCTC 2242]
gi|397339960|gb|EJJ33181.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|397340314|gb|EJJ33521.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|397345691|gb|EJJ38812.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|397356487|gb|EJJ49309.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|397361050|gb|EJJ53718.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|397368953|gb|EJJ61557.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|397376161|gb|EJJ68427.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|397381137|gb|EJJ73312.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|397387143|gb|EJJ79186.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|414706033|emb|CCN27737.1| protein PmbA [Klebsiella pneumoniae subsp. pneumoniae Ecl8]
Length = 450
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 174/453 (38%), Positives = 274/453 (60%), Gaps = 11/453 (2%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHS---SIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
K I ++ ++ ++ + A ++ A S + ++ G V R G+++ +E N+D
Sbjct: 6 KVISQVAQQRKTLEEAVTTALELAAGKSDGAEVSVSKTTGIGVSTRYGEVENVEFNSDGA 65
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +Y Q+ K G++S++D ++ T+ AA +IAR+T+ D FAG+ D++ L +
Sbjct: 66 LGITVYHQNRK----GSASSTDLSPDAIARTVQAALDIARYTSPDPFAGVADKDLLAFDA 121
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D L+ P +S DDA +A R E A + I N E + + NSHG +
Sbjct: 122 PDLDLFHPAEVSPDDAIELAARAEQAALKADKRITNTEGGSFNSHYGIKVFGNSHGMLQS 181
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
Y ++H +S IA +M+RD Y+ + L PE +G A+RT+SRL +K+ST
Sbjct: 182 YCSTRHSLSSCVIAEDDGDMERDYAYTIGRAIEDLQSPEWVGEECARRTLSRLAPRKLST 241
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
K PV+F +A L I+G ++YRKSTFL+DSLGK+I + I E PH+L
Sbjct: 242 MKAPVIFANEVATGLFGHLVGAIAGGAVYRKSTFLLDSLGKQILPEWLTIEEHPHLLKGL 301
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
S+ FD+EGV+T++R +VK+G++ + L+ YSA+KLGMK+TG++GG H+ I
Sbjct: 302 ASTPFDSEGVRTERRDIVKDGVLTQWLLTNYSARKLGMKSTGHAGGIHNWRINGRGL--- 358
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+ +MLK+M TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L+
Sbjct: 359 -SFAKMLKEMGTGLVVTELMGQGVSGVTGDYSRGASGFWVENGEIQYPVSEITIAGNLKE 417
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ IV IG D+ TR++ GS+L+ M IAG+
Sbjct: 418 MWRNIVTIGDDIETRSNIQCGSVLLPEMKIAGQ 450
>gi|261868709|ref|YP_003256631.1| PmbA protein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|365966462|ref|YP_004948024.1| PmbA protein [Aggregatibacter actinomycetemcomitans ANH9381]
gi|415769970|ref|ZP_11484585.1| PmbA protein [Aggregatibacter actinomycetemcomitans D17P-2]
gi|416076372|ref|ZP_11585453.1| PmbA protein [Aggregatibacter actinomycetemcomitans serotype b str.
SCC1398]
gi|444337111|ref|ZP_21151135.1| PmbA protein [Aggregatibacter actinomycetemcomitans serotype b str.
SCC4092]
gi|444345973|ref|ZP_21153971.1| PmbA protein [Aggregatibacter actinomycetemcomitans serotype c str.
AAS4A]
gi|261414041|gb|ACX83412.1| PmbA protein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|348004976|gb|EGY45466.1| PmbA protein [Aggregatibacter actinomycetemcomitans serotype b str.
SCC1398]
gi|348657003|gb|EGY74600.1| PmbA protein [Aggregatibacter actinomycetemcomitans D17P-2]
gi|365745375|gb|AEW76280.1| PmbA protein [Aggregatibacter actinomycetemcomitans ANH9381]
gi|443542212|gb|ELT52571.1| PmbA protein [Aggregatibacter actinomycetemcomitans serotype c str.
AAS4A]
gi|443547580|gb|ELT57051.1| PmbA protein [Aggregatibacter actinomycetemcomitans serotype b str.
SCC4092]
Length = 453
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 177/461 (38%), Positives = 286/461 (62%), Gaps = 12/461 (2%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDM---LNYAKKIGASHSSIEFNEGNGFSVFVRKGKID 57
M+Q +S + + E QQL + + A+K GA+ + + + G SV R +I+
Sbjct: 1 MQQKTLEKSTALLRQQE-QQLRDAVSLAIEIAQKAGAT-AEVGVTKSGGLSVSTRLREIE 58
Query: 58 VIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLP 117
+E NND + + +Y+ K GN+STSD ++ T+ AA IA++T+ D+ AGL
Sbjct: 59 NVEFNNDGALGISVYLGQQK----GNASTSDLTPDAIKSTVEAALAIAKYTSPDDCAGLA 114
Query: 118 DENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLL 177
D++ + + D LY + +D A +A E A ++ IVN+E +
Sbjct: 115 DKDLMAFDAPDLALYHAAEIEVDHAMQLALETERAALEHDARIVNSEGASFNAHTGVRVY 174
Query: 178 ANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTIS 237
NS+G + Y S++ +S S IA +++RD Y+ D +L QP+ +G +AA++ I+
Sbjct: 175 GNSYGMLQSYLSSRYSLSCSVIAEHQTQLERDYEYTVARDMTQLAQPKWVGEHAAQKAIA 234
Query: 238 RLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQII 297
RL+ +K++T++ PV+F +A L++ ISG SLYRK++FL+D L K++ +I+
Sbjct: 235 RLQPQKLATQQAPVIFLNDVATGLISHLTAAISGGSLYRKASFLLDHLDKQVLPDWFEIV 294
Query: 298 EDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLI 357
E PH++G S+ FD+EGVKTQ +++NGI+Q Y L++YS +KLGM++ G++GG H+ +
Sbjct: 295 ERPHLMGQLASTPFDSEGVKTQDMDIIRNGILQTYLLTSYSGRKLGMQSNGHAGGIHNWL 354
Query: 358 IISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEE 417
+ K SS L +L++MN GLLVTE+MG G+N ++GDYS+GA G+W+ENG+IQY V E
Sbjct: 355 V---KANSSGKLTALLRQMNRGLLVTEVMGQGVNPVSGDYSRGAAGFWVENGEIQYPVAE 411
Query: 418 ITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
ITI+G+L M + IVA+G D+ R++ +GSIL+ENM I+G
Sbjct: 412 ITIAGQLPEMLRNIVAVGDDIEHRSNIQTGSILLENMKISG 452
>gi|204927053|ref|ZP_03218255.1| protein PmbA [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|416423561|ref|ZP_11690950.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416433241|ref|ZP_11696767.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416442067|ref|ZP_11702154.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416447081|ref|ZP_11705593.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416455271|ref|ZP_11710896.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416457900|ref|ZP_11712502.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416465193|ref|ZP_11716694.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416482096|ref|ZP_11723622.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416487085|ref|ZP_11725395.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416534712|ref|ZP_11747200.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416543512|ref|ZP_11752294.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416555155|ref|ZP_11758640.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|416569128|ref|ZP_11765316.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|416580579|ref|ZP_11771970.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416587801|ref|ZP_11776337.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416600172|ref|ZP_11784119.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|416607646|ref|ZP_11788717.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416623657|ref|ZP_11797485.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416633647|ref|ZP_11802035.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416646319|ref|ZP_11807585.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416655936|ref|ZP_11812912.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416669358|ref|ZP_11819324.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416683654|ref|ZP_11824494.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416689085|ref|ZP_11825342.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416708448|ref|ZP_11833310.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416710133|ref|ZP_11834238.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416717724|ref|ZP_11839976.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416726258|ref|ZP_11846319.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416731298|ref|ZP_11849213.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416740748|ref|ZP_11854621.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416744880|ref|ZP_11856838.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|416752618|ref|ZP_11860430.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416763771|ref|ZP_11867445.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|417354601|ref|ZP_12130985.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
gi|417471679|ref|ZP_12167598.1| TldE/PmbA protein [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|418483441|ref|ZP_13052448.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418492330|ref|ZP_13058825.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|418496597|ref|ZP_13063031.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418500835|ref|ZP_13067226.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418503793|ref|ZP_13070152.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418508453|ref|ZP_13074756.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418511078|ref|ZP_13077347.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Pomona
str. ATCC 10729]
gi|418523888|ref|ZP_13089876.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|422006280|ref|ZP_16353337.1| TldE/PmbA protein [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|452121849|ref|YP_007472097.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Javiana
str. CFSAN001992]
gi|204323718|gb|EDZ08913.1| protein PmbA [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|322615600|gb|EFY12520.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322618660|gb|EFY15549.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322621927|gb|EFY18777.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322627651|gb|EFY24442.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322630958|gb|EFY27722.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322637823|gb|EFY34524.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322642282|gb|EFY38888.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322643944|gb|EFY40492.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322650981|gb|EFY47366.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322659809|gb|EFY56052.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322661980|gb|EFY58196.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322666271|gb|EFY62449.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322676121|gb|EFY72192.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322680605|gb|EFY76643.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|323192816|gb|EFZ78042.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323197307|gb|EFZ82447.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323213098|gb|EFZ97900.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323215471|gb|EGA00215.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323219456|gb|EGA03941.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323227759|gb|EGA11913.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323228929|gb|EGA13058.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323236459|gb|EGA20535.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323240039|gb|EGA24086.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323241913|gb|EGA25942.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323247938|gb|EGA31875.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323251424|gb|EGA35295.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323258210|gb|EGA41887.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323263644|gb|EGA47165.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323265760|gb|EGA49256.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|353561235|gb|EHC28230.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
gi|353622234|gb|EHC71854.1| TldE/PmbA protein [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|353630944|gb|EHC78354.1| TldE/PmbA protein [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|363559972|gb|EHL44119.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363566818|gb|EHL50831.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363577135|gb|EHL60961.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|366057027|gb|EHN21332.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366057632|gb|EHN21933.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366060934|gb|EHN25187.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366067367|gb|EHN31517.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366072121|gb|EHN36213.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366079708|gb|EHN43690.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366085124|gb|EHN49015.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Pomona
str. ATCC 10729]
gi|366831009|gb|EHN57875.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372208200|gb|EHP21696.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|451910853|gb|AGF82659.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Javiana
str. CFSAN001992]
Length = 446
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 263/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 208 AMADLQAPEWVGTECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 268 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTN 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|194446471|ref|YP_002043675.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|418816670|ref|ZP_13372162.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21538]
gi|418822260|ref|ZP_13377673.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22425]
gi|418824819|ref|ZP_13380161.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22462]
gi|418833036|ref|ZP_13387969.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM N18486]
gi|418841412|ref|ZP_13396231.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21554]
gi|418852978|ref|ZP_13407674.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19593]
gi|194405134|gb|ACF65356.1| protein PmbA [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|392787935|gb|EJA44473.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22425]
gi|392790031|gb|EJA46533.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21538]
gi|392796505|gb|EJA52837.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM N18486]
gi|392808741|gb|EJA64789.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21554]
gi|392820016|gb|EJA75872.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22462]
gi|392828221|gb|EJA83918.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19593]
Length = 446
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 263/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLNLFHPAEVTPDEAIELAARAEQASLKA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 208 AMADLQAPEWVGAECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 268 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTN 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|238910594|ref|ZP_04654431.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
Length = 446
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 263/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 208 AMADLQAPERVGAECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 268 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTN 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|365104242|ref|ZP_09333903.1| protein pmbA [Citrobacter freundii 4_7_47CFAA]
gi|395230037|ref|ZP_10408345.1| protein pmbA [Citrobacter sp. A1]
gi|424733238|ref|ZP_18161803.1| protein pmba [Citrobacter sp. L17]
gi|363644855|gb|EHL84136.1| protein pmbA [Citrobacter freundii 4_7_47CFAA]
gi|394716331|gb|EJF22086.1| protein pmbA [Citrobacter sp. A1]
gi|422892426|gb|EKU32285.1| protein pmba [Citrobacter sp. L17]
Length = 450
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 264/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 AMGDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R ++K+G++ + L+
Sbjct: 272 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIIKDGVLTQWLLTN 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIPGQGL----SFEQLLKEMGTGLVVTELMGQGVSGITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|365968738|ref|YP_004950299.1| PmbA protein [Enterobacter cloacae EcWSU1]
gi|365747651|gb|AEW71878.1| PmbA [Enterobacter cloacae EcWSU1]
Length = 473
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 265/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D ++
Sbjct: 59 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPDAIAR 114
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 115 TVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKA 174
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 175 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 234
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 235 ALGDLQSPEWVGAECAQRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 294
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L+
Sbjct: 295 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTN 354
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 355 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSGITGD 410
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 411 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 470
Query: 457 AGK 459
AG+
Sbjct: 471 AGQ 473
>gi|146281412|ref|YP_001171565.1| PmbA protein [Pseudomonas stutzeri A1501]
gi|145569617|gb|ABP78723.1| PmbA protein [Pseudomonas stutzeri A1501]
Length = 448
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 178/442 (40%), Positives = 274/442 (61%), Gaps = 8/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++ + ++ A++ GAS S + + G S VR+G+++ +E N D+ + +Y+ K
Sbjct: 15 LREKVERIIEEARRQGASASEVSVSMEQGLSTTVRQGEVETVEFNRDQGFGITLYVGQSK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST+ +++ +T+ AA IAR + D FAGL D + D LY PW +
Sbjct: 75 ----GSASTTGSGDEAIRETVAAALAIARHASQDEFAGLADATLMARELPDLDLYHPWSI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE+ AF+F++ I N + T + T Q NS+GF+ GY ++H +S
Sbjct: 131 TPEQAIEQALSCESAAFDFDARIRNADGTSLNTHQGCRAYGNSNGFIGGYCSTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD +Y N + L P IG AA+R + RL A+ I T + PVLF L
Sbjct: 191 MIAESEGQMQRDYFYDVNRIGEALIDPRTIGRRAAERAVRRLGARPIPTCEVPVLFAPEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L + F ISG +LYRK+++L D+LG+ +F + + E PHI + GS+S+D +G+
Sbjct: 251 ATGLFSHFIAAISGGNLYRKASYLEDALGQTLFPEWLSLDERPHIPRALGSASYDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y LSTYS +KLGM +T N+GG H+L + + ++ +L++M
Sbjct: 311 TYAKPFVENGRLISYVLSTYSGRKLGMPSTANAGGVHNLFV----SHGEEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ+ V+E+TI+G L++MF+QIVAIG D
Sbjct: 367 RGLLVTELMGQGLNLVTGDYSRGAGGYWVENGEIQFPVQEVTIAGNLRDMFRQIVAIGCD 426
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
+ TR + +GS+LIE M++AGK
Sbjct: 427 IETRGNVRTGSVLIERMMVAGK 448
>gi|145297393|ref|YP_001140234.1| modulator of DNA gyrase PmbA [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418360700|ref|ZP_12961372.1| modulator of DNA gyrase PmbA [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|142850165|gb|ABO88486.1| modulator of DNA gyrase PmbA [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356688113|gb|EHI52678.1| modulator of DNA gyrase PmbA [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 447
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 181/443 (40%), Positives = 265/443 (59%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ + + + L AK +GAS + + ++ G SV R +++ IE N D + + +Y +D
Sbjct: 12 AHLEAVVAEALEIAKGLGASLAEVSISKQTGLSVNTRGCELESIEFNKDGALGIAVY-RD 70
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
G K G+SST+D K ++ + AA IAR T++D+ AGL + L + D +L
Sbjct: 71 GCK---GSSSTTDLGKPAIRAAVEAAMEIARHTSADDCAGLANAELLAWDAPDLQLCHQI 127
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L +A CE A ++ I +++ G ++ + NSHGF+ GY S++ +S
Sbjct: 128 ELDPQRGIELAIECERLALGRDARIKHSDGAGFSSHLGIKVYGNSHGFVKGYAASRNSLS 187
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I +MQRD YSS+ D L P+ I A +RT+SRL A+KISTR PVLF
Sbjct: 188 CVLIGELDGDMQRDYGYSSSRDLGGLWSPQRIADEAVERTVSRLGARKISTRHAPVLFHP 247
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
A L ISG +LYRKS+FL+D LGK+I + I E PH+LG S+ FD EG
Sbjct: 248 DTAAGLWGHLVMAISGGNLYRKSSFLLDKLGKQILPQWLTIQEFPHLLGGLASTPFDGEG 307
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V T+ +V+NG + + L++YSA+KLG+ TTG++GG H+ + + + + + MLK+
Sbjct: 308 VLTRNMDIVRNGELMSWLLTSYSARKLGLTTTGHAGGIHNWQV----SNTGQDFQGMLKE 363
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGLLVTELMG G+N + GDYS+GA G+W+ENG+I Y VEEITI+G L MF IVA+G
Sbjct: 364 MGTGLLVTELMGQGVNIVNGDYSRGAAGFWVENGEIAYPVEEITIAGNLSEMFSHIVAVG 423
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
D R+S +GS+L+ENM +AG
Sbjct: 424 CDEDERSSLKTGSVLVENMKLAG 446
>gi|90412993|ref|ZP_01220991.1| putative pmbA protein [Photobacterium profundum 3TCK]
gi|90326008|gb|EAS42447.1| putative pmbA protein [Photobacterium profundum 3TCK]
Length = 447
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 176/454 (38%), Positives = 279/454 (61%), Gaps = 12/454 (2%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
R + + + E + L A + A + + N+ G SV R +I+ +E N+D +
Sbjct: 4 REQVAHQRVELEAAVAKALEVAGQ-QADAAEVAINKTTGISVSTRMCEIENVEFNSDGAL 62
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
+ +Y + G++STSD +K++ T+ AA +IAR+T+ D FAG + N
Sbjct: 63 GITVY----RGQRKGSASTSDLSEKAIAQTVAAALDIARYTSEDPFAGPAPAELMAKNIP 118
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
+ L+ P D A IA+ E A +F+ I ++ + + NSHG ++ Y
Sbjct: 119 ELDLFHPDEPEPDFAASIAFAAEQAALDFDPRIKQSDGASYDSHYGVRVYGNSHGMLASY 178
Query: 188 PFSKHIISISPIAIKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
S+H S IA +GK +M+RD Y+S+ +L PE +G +AA+RT+ R+ A+K+S
Sbjct: 179 ASSRHSTSCCVIA-EGKNGQMERDYSYTSSRVASELWTPERVGQHAAERTLGRIDAQKLS 237
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
TR+ P++F A +A L ISG++LYRKS+FL+D LG++IF + I E PHIL
Sbjct: 238 TREAPIMFSADIATGLFGHLIMGISGSNLYRKSSFLLDQLGEQIFPEWLGISERPHILRG 297
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
S+ FD+EG+ T+ ++ +G++Q Y +++Y+A+KLG + TG++GG H+ ++ S +
Sbjct: 298 MASTPFDSEGLATRDLEIITDGVLQTYLMTSYAARKLGQQPTGHAGGIHNWLVKS----T 353
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
++ ++MLKKM+ GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L+
Sbjct: 354 GESFEQMLKKMDRGLLVTELMGQGVNIVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLK 413
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+M K IVAIG+D TR+ +GSIL++ M IAG+
Sbjct: 414 DMMKNIVAIGADTETRSQIQTGSILLDTMKIAGE 447
>gi|422671940|ref|ZP_16731305.1| peptidase U62, modulator of DNA gyrase, partial [Pseudomonas
syringae pv. aceris str. M302273]
gi|330969679|gb|EGH69745.1| peptidase U62, modulator of DNA gyrase, partial [Pseudomonas
syringae pv. aceris str. M302273]
Length = 411
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 171/414 (41%), Positives = 256/414 (61%), Gaps = 8/414 (1%)
Query: 45 NGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNI 104
G S VR+ +++ +E N D+ + +Y+ K G++STS ++ +T+ AA I
Sbjct: 5 QGLSTSVRQREVETVEFNRDQGFGITLYVGQRK----GSASTSATGADAIRETVAAALAI 60
Query: 105 ARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNE 164
A T+ D+ +GL D + +DF LY W ++ + A A CE AF+ +S I N +
Sbjct: 61 AEHTSEDDSSGLADAALMAKEVMDFDLYHTWDITPEQAIEKALLCEAAAFDADSRIKNAD 120
Query: 165 NTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQP 224
T + T Q + NS+GF+ GY ++H +S IA +MQRD WY N + L
Sbjct: 121 GTTLNTHQGCRVYGNSNGFIGGYASTRHSLSCVMIAEGEGQMQRDYWYDVNRQGELLADA 180
Query: 225 EIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDS 284
+ IG AA R SRL A+ + T + PVLF A LA L F ISG +LYRKS+FL +
Sbjct: 181 QSIGRKAALRAASRLGARPVPTCEVPVLFAAELAGGLFGSFLGAISGGTLYRKSSFLEGA 240
Query: 285 LGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGM 344
LG+++F + I E PH+ + GSS+FD++G+ T + V G + Y LSTYS +KLGM
Sbjct: 241 LGQRLFPEWMTIDERPHLRHAMGSSAFDSDGLATFAKPFVAGGDLVSYVLSTYSGRKLGM 300
Query: 345 KTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGY 404
+T N+GG H+L + + SD+ ++++M GLLVTELMG G+N +TGDYS+GA G+
Sbjct: 301 PSTANAGGVHNLFV----SHGSDDQAALIRRMGRGLLVTELMGSGLNMVTGDYSRGAAGF 356
Query: 405 WIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GSD+ R++ +GS+LIE M +AG
Sbjct: 357 WVENGEIQFPVQEVTIAGNMRDMFKQIVAVGSDLELRSNIRTGSVLIERMTVAG 410
>gi|354721885|ref|ZP_09036100.1| peptidase PmbA [Enterobacter mori LMG 25706]
Length = 446
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 172/435 (39%), Positives = 269/435 (61%), Gaps = 11/435 (2%)
Query: 25 MLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNS 84
ML K GA + ++ G SV R G+++ +E N+D + + +Y Q+ K G++
Sbjct: 23 MLASEKSDGAE---VAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSA 75
Query: 85 STSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKL 144
S++D ++ T+ AA +IAR+T+ D +AG+ D+ L + D L+ P ++ D+A
Sbjct: 76 SSTDLSPDAIARTVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPAEVTPDEAIE 135
Query: 145 IAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK 204
+A R E + + I N E + + NSHG + GY ++H +S IA +
Sbjct: 136 LAARAEQASLQADKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENG 195
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
+M+RD Y+ L PE +G A+RT+SRL +K+ST K PV+F +A L
Sbjct: 196 DMERDYAYTIGRALGDLQSPEWVGKECAERTLSRLSPRKLSTMKAPVIFANEVATGLFGH 255
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
I+G S+YRKSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++
Sbjct: 256 LVGAIAGGSVYRKSTFLLDSLGKQILPEWLTIEEHPHLLKGLASTPFDSEGVRTERRDII 315
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
K+GI+ + L+ YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTE
Sbjct: 316 KDGILTQWLLTNYSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTE 371
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
LMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++
Sbjct: 372 LMGQGVSGITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNI 431
Query: 445 TSGSILIENMIIAGK 459
GS+L+ M IAG+
Sbjct: 432 QCGSVLLPEMKIAGQ 446
>gi|365142962|ref|ZP_09347954.1| protein pmbA [Klebsiella sp. 4_1_44FAA]
gi|378976634|ref|YP_005224775.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae HS11286]
gi|402782779|ref|YP_006638325.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|420027374|ref|ZP_14541367.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|420033367|ref|ZP_14547173.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|420038071|ref|ZP_14551721.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|420043938|ref|ZP_14557422.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|420049656|ref|ZP_14562962.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|420055250|ref|ZP_14568418.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|420060000|ref|ZP_14573003.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|420067043|ref|ZP_14579839.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|420071685|ref|ZP_14584329.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|420077918|ref|ZP_14590380.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|420085884|ref|ZP_14598088.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|421909706|ref|ZP_16339511.1| TldE protein, part of TldE/TldD proteolytic complex [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421913981|ref|ZP_16343642.1| TldE protein, part of TldE/TldD proteolytic complex [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|425078688|ref|ZP_18481791.1| protein pmbA [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|425079561|ref|ZP_18482658.1| protein pmbA [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|425089320|ref|ZP_18492413.1| protein pmbA [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|425094384|ref|ZP_18497467.1| protein pmbA [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|428152697|ref|ZP_19000352.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|428931449|ref|ZP_19005045.1| peptidase PmbA [Klebsiella pneumoniae JHCK1]
gi|428938358|ref|ZP_19011487.1| peptidase PmbA [Klebsiella pneumoniae VA360]
gi|428941803|ref|ZP_19014833.1| peptidase PmbA [Klebsiella pneumoniae VA360]
gi|428941843|ref|ZP_19014871.1| peptidase PmbA [Klebsiella pneumoniae VA360]
gi|449047685|ref|ZP_21730920.1| peptidase PmbA [Klebsiella pneumoniae hvKP1]
gi|363650459|gb|EHL89549.1| protein pmbA [Klebsiella sp. 4_1_44FAA]
gi|364516045|gb|AEW59173.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae HS11286]
gi|397393425|gb|EJJ85183.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|397395351|gb|EJJ87061.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|397404750|gb|EJJ96243.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|397412743|gb|EJK03971.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|397412886|gb|EJK04109.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|397421922|gb|EJK12913.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|397428761|gb|EJK19491.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|397434730|gb|EJK25363.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|397440011|gb|EJK30433.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|397445507|gb|EJK35749.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|397448765|gb|EJK38931.1| peptidase PmbA [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|402543628|gb|AFQ67777.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|405589903|gb|EKB63456.1| protein pmbA [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|405599761|gb|EKB72936.1| protein pmbA [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|405608073|gb|EKB81025.1| protein pmbA [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|405609835|gb|EKB82675.1| protein pmbA [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|410116343|emb|CCM82136.1| TldE protein, part of TldE/TldD proteolytic complex [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410123675|emb|CCM86267.1| TldE protein, part of TldE/TldD proteolytic complex [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|426299759|gb|EKV62078.1| peptidase PmbA [Klebsiella pneumoniae VA360]
gi|426299828|gb|EKV62143.1| peptidase PmbA [Klebsiella pneumoniae VA360]
gi|426305953|gb|EKV68065.1| peptidase PmbA [Klebsiella pneumoniae VA360]
gi|426308071|gb|EKV70141.1| peptidase PmbA [Klebsiella pneumoniae JHCK1]
gi|427537347|emb|CCM96490.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|448877293|gb|EMB12260.1| peptidase PmbA [Klebsiella pneumoniae hvKP1]
Length = 446
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 174/453 (38%), Positives = 274/453 (60%), Gaps = 11/453 (2%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHS---SIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
K I ++ ++ ++ + A ++ A S + ++ G V R G+++ +E N+D
Sbjct: 2 KVISQVAQQRKTLEEAVTTALELAAGKSDGAEVSVSKTTGIGVSTRYGEVENVEFNSDGA 61
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +Y Q+ K G++S++D ++ T+ AA +IAR+T+ D FAG+ D++ L +
Sbjct: 62 LGITVYHQNRK----GSASSTDLSPDAIARTVQAALDIARYTSPDPFAGVADKDLLAFDA 117
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D L+ P +S DDA +A R E A + I N E + + NSHG +
Sbjct: 118 PDLDLFHPAEVSPDDAIELAARAEQAALKADKRITNTEGGSFNSHYGIKVFGNSHGMLQS 177
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
Y ++H +S IA +M+RD Y+ + L PE +G A+RT+SRL +K+ST
Sbjct: 178 YCSTRHSLSSCVIAEDDGDMERDYAYTIGRAIEDLQSPEWVGEECARRTLSRLAPRKLST 237
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
K PV+F +A L I+G ++YRKSTFL+DSLGK+I + I E PH+L
Sbjct: 238 MKAPVIFANEVATGLFGHLVGAIAGGAVYRKSTFLLDSLGKQILPEWLTIEEHPHLLKGL 297
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
S+ FD+EGV+T++R +VK+G++ + L+ YSA+KLGMK+TG++GG H+ I
Sbjct: 298 ASTPFDSEGVRTERRDIVKDGVLTQWLLTNYSARKLGMKSTGHAGGIHNWRINGRGL--- 354
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+ +MLK+M TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L+
Sbjct: 355 -SFAKMLKEMGTGLVVTELMGQGVSGVTGDYSRGASGFWVENGEIQYPVSEITIAGNLKE 413
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ IV IG D+ TR++ GS+L+ M IAG+
Sbjct: 414 MWRNIVTIGDDIETRSNIQCGSVLLPEMKIAGQ 446
>gi|110808023|ref|YP_691543.1| peptidase PmbA [Shigella flexneri 5 str. 8401]
gi|110617571|gb|ABF06238.1| PmbA protein [Shigella flexneri 5 str. 8401]
Length = 423
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 9 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 64
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + + L+ P +S D+A +A R E A
Sbjct: 65 TVQAALDIARYTSPDPCAGVADKELLAFDAPNLDLFHPAEVSPDEAIELAARAEQAALQA 124
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 125 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 184
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 185 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 244
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 245 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 304
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 305 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGLGVSAITGD 360
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 361 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 420
Query: 457 AGK 459
AG+
Sbjct: 421 AGQ 423
>gi|399522098|ref|ZP_10762763.1| PmbA protein [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399110133|emb|CCH39323.1| PmbA protein [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 448
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 173/441 (39%), Positives = 268/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + +L A++ GAS + + G G S VR+G+++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEAILAEARRQGASACEVAVSAGQGLSTTVRQGEVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IA+ T+ D AGL D + + LY PW +
Sbjct: 75 ----GSASTSATGIEAIRETVAAALAIAKHTSEDECAGLADAALMARELPELDLYHPWSI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF + I N + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAVEQALACEAAAFAADKRIKNADGTSLNTHQGCRVYGNSHGFVGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N + L + IG AA+R +SRL A+ + T + PVLF A L
Sbjct: 191 MIAEGEGQMQRDYWYDVNRQGELLADAKGIGQRAAERAVSRLGARPVPTCEVPVLFAAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L + ISG +LYR S+FL +LG+++F + + E PH+ + GS++FD +G+
Sbjct: 251 AGGLFSHLLAAISGGNLYRHSSFLEGALGQRLFPEWLTLDERPHLPRALGSAAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y LSTYS +KLG+ +T NSGG H+L I T ++ + ++++M
Sbjct: 311 TYAKPFVEKGELVSYVLSTYSGRKLGLPSTANSGGVHNLFI----THGDEDQQALIRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G L++MF+Q+VA+G D
Sbjct: 367 RGLLVTELMGQGLNLVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNLRDMFRQVVAVGCD 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R + +GS+LIE M +AG
Sbjct: 427 LERRGNICTGSVLIEKMTVAG 447
>gi|417387572|ref|ZP_12151959.1| TldE/PmbA protein [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|353599939|gb|EHC55991.1| TldE/PmbA protein [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
Length = 446
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 263/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 208 AMADLQAPEWVGTECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 268 KSTFLLDSLGKQILPEWLIIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTN 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|421846175|ref|ZP_16279325.1| peptidase PmbA [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|411772619|gb|EKS56224.1| peptidase PmbA [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|455644784|gb|EMF23877.1| peptidase PmbA [Citrobacter freundii GTC 09479]
Length = 446
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 263/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 208 AMGDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R ++K G++ + L+
Sbjct: 268 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIIKEGVLTQWLLTN 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIPGQGL----SFEQLLKEMGTGLVVTELMGQGVSGITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|146310087|ref|YP_001175161.1| peptidase PmbA [Enterobacter sp. 638]
gi|145316963|gb|ABP59110.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Enterobacter sp. 638]
Length = 450
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 171/435 (39%), Positives = 269/435 (61%), Gaps = 11/435 (2%)
Query: 25 MLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNS 84
ML K GA + ++ G SV R G+++ +E N+D + + +Y Q+ K G++
Sbjct: 27 MLASGKSDGAE---VAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSA 79
Query: 85 STSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKL 144
S++D ++ T+ AA +IAR+T+ D +AG+ +++ L + D L+ P +S D+A
Sbjct: 80 SSTDLSPDAIARTVQAALDIARYTSPDPYAGVAEKDLLAFDAPDLDLFHPAEVSPDEAIE 139
Query: 145 IAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK 204
A R E + + I N E + + NSHG + GY ++H +S IA +
Sbjct: 140 YAARAEQASLKADKRITNTEGGSFNSHYGIKVFGNSHGMLQGYSSTRHSLSSCVIAEENG 199
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
+M+RD Y+ L PE +G AKRT+SRL +K+ST K PV+F +A L
Sbjct: 200 DMERDYAYTIGRAMGDLQSPEWVGEECAKRTLSRLSPRKLSTMKAPVIFANEVATGLFGH 259
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
I+G ++YRKSTFL+DSLG++I + I E PH+L S+ FD EGV+T++R ++
Sbjct: 260 LVGAIAGGAVYRKSTFLLDSLGQQILPEWLTIEEHPHLLKGLASTPFDGEGVRTERRDII 319
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
K+GI+ + L++YSA+KLG+++TG++GG H+ I N ++MLK+M TGL+VTE
Sbjct: 320 KDGILTQWLLTSYSARKLGLQSTGHAGGIHNWRIEGQGL----NFEQMLKEMGTGLVVTE 375
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
LMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++
Sbjct: 376 LMGQGVSGITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNI 435
Query: 445 TSGSILIENMIIAGK 459
GS+L+ M IAG+
Sbjct: 436 QCGSVLLPEMKIAGQ 450
>gi|416106816|ref|ZP_11590065.1| PmbA protein [Aggregatibacter actinomycetemcomitans serotype c str.
SCC2302]
gi|348006018|gb|EGY46484.1| PmbA protein [Aggregatibacter actinomycetemcomitans serotype c str.
SCC2302]
Length = 474
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 170/433 (39%), Positives = 274/433 (63%), Gaps = 8/433 (1%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
+ A+K GA+ + + + G SV R +I+ +E NND + + +Y+ K GN+S
Sbjct: 49 IEIAQKAGAT-AEVGVTKSGGLSVSTRLREIENVEFNNDGALGISVYLGQQK----GNAS 103
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD ++ T+ AA IA++T+ D+ AGL D++ + + D LY + +D A +
Sbjct: 104 TSDLTPDAIKSTVEAALAIAKYTSPDDCAGLADKDLMAFDAPDLALYHAAEIEVDHAMQL 163
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE 205
A E A ++ IVN+E + NS+G + Y S++ +S S IA +
Sbjct: 164 ALETERAALEHDARIVNSEGASFNAHTGVRVYGNSYGMLQSYLSSRYSLSCSVIAEHQTQ 223
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
++RD Y+ D +L QP+ +G +AA++ I+RL+ +K++T++ PV+F +A L++
Sbjct: 224 LERDYEYTVARDMTQLAQPKWVGEHAAQKAIARLQPQKLATQQAPVIFLNDVATGLISHL 283
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
ISG SLYRK++FL+D L K++ +I+E PH++G S+ FD+EGVKTQ +++
Sbjct: 284 TAAISGGSLYRKASFLLDHLDKQVLPDWFEIVERPHLMGQLASTPFDSEGVKTQDMDIIR 343
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
NGI+Q Y L++YS +KLGM++ G++GG H+ ++ K SS L +L++MN GLLVTE+
Sbjct: 344 NGILQTYLLTSYSGRKLGMQSNGHAGGIHNWLV---KANSSGKLTALLRQMNRGLLVTEV 400
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
MG G+N ++GDYS+GA G+W+ENG+IQY V EITI+G+L M + IVA+G D+ R++
Sbjct: 401 MGQGVNPVSGDYSRGAAGFWVENGEIQYPVAEITIAGQLPEMLRNIVAVGDDIEHRSNIQ 460
Query: 446 SGSILIENMIIAG 458
+GSIL+ENM I+G
Sbjct: 461 TGSILLENMKISG 473
>gi|37527907|ref|NP_931252.1| peptidase PmbA [Photorhabdus luminescens subsp. laumondii TTO1]
gi|36787343|emb|CAE16432.1| PmbA protein, involved in the maturation of antibiotic
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 446
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 178/458 (38%), Positives = 268/458 (58%), Gaps = 16/458 (3%)
Query: 2 EQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQ 61
+Q+ + R + + S+ +LA K G + + N+ G SV R G+I+ +E
Sbjct: 5 DQIAEQRKQLENAVSQALELA--------KAGCDAAEVAVNKTTGISVSTRFGEIENVEF 56
Query: 62 NNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENT 121
N+D + + +Y Q K G++S++D ++ T+ AA +IAR+T+ D AG D+
Sbjct: 57 NSDGALGITVYHQQRK----GSASSTDLSPDAIARTVQAAVDIARYTSQDPCAGPADKAL 112
Query: 122 LEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSH 181
L D L+ P L D A +A R E A + I N E + + NSH
Sbjct: 113 LAFEAPDLNLFHPTELDADKAIELAARAEQTALQADKRITNTEGGSFNSHYGIRVFGNSH 172
Query: 182 GFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKA 241
G + Y S+H +S IA +M+RD Y+ N + L PE +G A+R +SRL
Sbjct: 173 GMLQSYCSSRHSMSSCVIAELDGDMERDYAYTINRRFEDLKSPEWVGQECARRALSRLSP 232
Query: 242 KKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPH 301
+K+ T K PVLF A +A L ISG+S+YRKS+FL+D LGK+I S + I E PH
Sbjct: 233 RKLPTMKAPVLFAAEVATGLFGHLVGAISGSSIYRKSSFLLDHLGKQILPSWLTIEERPH 292
Query: 302 ILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISN 361
+L SS FD+EGV T R ++K+GI+Q + L++YSA+KLGM +TG++GG H+ I
Sbjct: 293 LLAGLASSPFDSEGVSTCNRDIIKDGILQTWLLTSYSARKLGMASTGHAGGIHNWCIAGQ 352
Query: 362 KTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITIS 421
+ +L++M TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+
Sbjct: 353 ----GQDFAGLLRQMGTGLVVTELMGQGVSAVTGDYSRGAAGFWVENGEIQYPVSEITIA 408
Query: 422 GKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
G L++M+ +V IG+D+ TR++ GS+L+ M IAG+
Sbjct: 409 GNLKDMWANMVTIGNDIETRSNIQCGSVLLPEMSIAGQ 446
>gi|398901421|ref|ZP_10650298.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM50]
gi|398179705|gb|EJM67305.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM50]
Length = 448
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 177/441 (40%), Positives = 269/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEAKRQGASACEVAVSLEQGLSTTVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
++S S+ ++ +T+ AA IAR T+ D +GL D + + DF L+ W +
Sbjct: 75 GSASTSASGSE----AIRETVAAALAIARHTSEDEASGLADAALMAKDLQDFDLFHQWNI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF +S I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEQALACEAAAFAADSRIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L PE IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGNLLASPESIGLRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG SLYRKS+FL +LG+K+F + I E PH++ + GSS+FD +G+
Sbjct: 251 AGGLFGSFLSAISGGSLYRKSSFLEGTLGQKLFPEWLTIDERPHLMRALGSSAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TYS +KLGM +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVEKGELVSYILGTYSGRKLGMPSTANAGGVHNLFV----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ++V+E+TI+G +++MFKQI+A+G+D
Sbjct: 367 RGLLVTELMGQGLNMVTGDYSRGAAGFWVENGEIQFAVQEVTIAGNMRDMFKQIIAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|418021769|ref|ZP_12660785.1| putative Zn-dependent protease [Candidatus Regiella insecticola
R5.15]
gi|347602869|gb|EGY27818.1| putative Zn-dependent protease [Candidatus Regiella insecticola
R5.15]
Length = 448
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 178/441 (40%), Positives = 263/441 (59%), Gaps = 9/441 (2%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+Q + L A + + + + + G S+ R GK++ +E N+D + + +Y Q K
Sbjct: 16 LEQAVKHALQLAS-LSSDAAEVAITKTTGISISTRDGKVENVEFNSDGALGITVYHQQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++S++D ++ T+ AA NIAR T+ D +G+ D+ L D L L
Sbjct: 75 ----GSASSTDLSPNAIERTVKAALNIARHTSIDPCSGIADKELLAFKAPDLDLLHASDL 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+D +A + E A F+ I ++E + NSHG Y S++ +S S
Sbjct: 131 DVDHGIKLAAQAEQTALGFDKCITHSEGGNFNNHYGIRVFGNSHGMSQSYCSSRYSLSCS 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA K +M+RD YS + L PE+IG A+R +SRL K+STRK PVLF A +
Sbjct: 191 VIAEKDGKMERDYAYSVSRKMSDLKNPELIGQECARRALSRLNPVKLSTRKAPVLFAAEV 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L ISG ++YRKSTFL+D LGK+I + + I E PH+LG SS FD+EGV+
Sbjct: 251 ATGLFGHLVSAISGGNIYRKSTFLLDHLGKQILPNWLTIEEKPHLLGGLASSPFDSEGVR 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + +VK+G++Q Y LS+YSA+KLG+K+TG++GG H+ I + MLK+++
Sbjct: 311 TVTQDIVKDGVLQTYLLSSYSARKLGLKSTGHAGGIHNWRIAGQ----GQDFTAMLKQLD 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGLLVTELMGDG+N +TGDYS+GA G+W++ GKIQY V ITI+G L+N+ + IV+IGSD
Sbjct: 367 TGLLVTELMGDGVNTVTGDYSRGAAGFWVDKGKIQYPVSGITIAGNLKNILRNIVSIGSD 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ TR++ GS+L+ M IAG
Sbjct: 427 IETRSNIQCGSVLLPPMKIAG 447
>gi|344345344|ref|ZP_08776197.1| peptidase U62 modulator of DNA gyrase [Marichromatium purpuratum
984]
gi|343803065|gb|EGV20978.1| peptidase U62 modulator of DNA gyrase [Marichromatium purpuratum
984]
Length = 449
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 177/444 (39%), Positives = 266/444 (59%), Gaps = 8/444 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ Q+ ++ML A++ GAS + G V VR G+++ +E D + + +Y
Sbjct: 14 ARLQESVEEMLREAERRGASAAEASIGSSTGLEVAVRLGEVETVEHIRDNGLGITVYF-- 71
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
G++ G++ST+D ++ D + AA IA +T D+ A L + D L PW
Sbjct: 72 GQR--RGSASTTDLSPAAVRDAVRAACAIAEYTQEDSCAHLAAPELMARELPDLDLCHPW 129
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
+ +D A +A CE A + IVN+E ++T + NSHGF+ GYP ++H ++
Sbjct: 130 PIGVDAAVALAVECEEAARGHDPRIVNSEGASLSTHFGLRVYGNSHGFIGGYPTTRHGLN 189
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
S IA +G+ MQRD W+SS P+ LD IG AA R ++RL +++ TRK PVLF A
Sbjct: 190 CSVIAQEGESMQRDYWWSSARAPEDLDAAARIGARAAARAVARLNGRRLGTRKVPVLFRA 249
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A LL ISG SLYR+++FL+DSL ++IF +++ E P + S+ FD +G
Sbjct: 250 EVATGLLRGLIGAISGGSLYRRASFLLDSLEERIFPEFVRVHEQPLLPRGLASAPFDGDG 309
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V T+ + +V++G++Q Y L TYS +LGM TT N+GG +LII S + +L++
Sbjct: 310 VATRAKDLVRDGVLQTYVLDTYSGCRLGMPTTANAGGVRNLIIDSGPLDRA----ALLRE 365
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGL+VTELMG G+N +TGDYS+GA G+W+ENG+IQY VEE+TI+G L+ MF +VA+G
Sbjct: 366 MGTGLMVTELMGHGVNMVTGDYSRGAAGFWVENGEIQYPVEEVTIAGNLREMFANLVAVG 425
Query: 436 SDVLTRNSNTSGSILIENMIIAGK 459
D S +GS LIE M +AG+
Sbjct: 426 DDCDFPGSTRTGSWLIERMTVAGE 449
>gi|300715071|ref|YP_003739874.1| PmbA protease [Erwinia billingiae Eb661]
gi|299060907|emb|CAX58014.1| PmbA protease involved in Microcin B17 maturation and sensitivity
to the DNA gyrase inhibitor LetD [Erwinia billingiae
Eb661]
Length = 446
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 179/455 (39%), Positives = 273/455 (60%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K S+ + +Q L AK + + + + G SV R G+++ +E N+D
Sbjct: 1 MKLLSQVAEQRKTLEQAVATALELAK-VSTDGAEVAVTKTTGISVSTRFGEVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q+ K G++S++D ++ T+ AA +IA+FT +D FAG D L
Sbjct: 60 GALGITVYHQNRK----GSASSTDLSPDAIKRTVQAAIDIAKFTTADPFAGPADRELLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
+ D L+ P L D A +A R E A + I N E + + NSHG +
Sbjct: 116 DAPDLDLFHPTDLDPDRAIELAARAEQAALKADKRITNTEGGSFNSHIGMKVFGNSHGMI 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
GY S+H IS S IA +M+RD Y+ + L PE +G A+RT+SRL +K+
Sbjct: 176 QGYSSSRHSISSSVIAEANGDMERDYAYTIGRAIEDLKSPEWVGEECARRTLSRLSPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
ST K PVLF A +A L ISG S+YRKSTFL+DS+G++I + I E PH+L
Sbjct: 236 STMKAPVLFAAEVATGLFGHLVGAISGGSVYRKSTFLLDSMGQQILPEWLTIQEQPHLLK 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+TQ+R +VK+G++Q + L++YSA+KLG+++TG++GG H+ I
Sbjct: 296 GLASTPFDSEGVRTQQRDIVKDGVLQTWLLTSYSARKLGLQSTGHAGGIHNWRIAGQ--- 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
D+ ++LKKM TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V E+TI+G L
Sbjct: 353 -GDSFDQLLKKMGTGLVVTELMGQGVSGMTGDYSRGAAGFWVENGEIQYPVSEVTIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M+ +V +GSD+ R++ GS+L+ M IAG+
Sbjct: 412 KDMWMNMVTVGSDIELRSNIQCGSVLLPEMKIAGQ 446
>gi|224586261|ref|YP_002640060.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|224470789|gb|ACN48619.1| putative PmbA protein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
Length = 450
Score = 333 bits (855), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 166/423 (39%), Positives = 263/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S I+ + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVISEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 212 AMADLQAPEWVGAECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 272 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTN 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|308188233|ref|YP_003932364.1| protein pmbA [Pantoea vagans C9-1]
gi|308058743|gb|ADO10915.1| Protein pmbA [Pantoea vagans C9-1]
Length = 446
Score = 333 bits (855), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 267/441 (60%), Gaps = 10/441 (2%)
Query: 19 QQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKK 78
Q +AQ L AK + + ++ G V R G+++ +E N+D + + +Y Q+ K
Sbjct: 16 QAIAQ-ALELAKA-STDSAEVAVSKTTGIGVSTRYGEVENVEFNSDGALGITVYHQNRK- 72
Query: 79 MFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLS 138
G++S++D ++ T+ AA +IAR+T+ D FAGL D L + D LY PW +
Sbjct: 73 ---GSASSTDLSPDAIKRTVQAAIDIARYTSPDPFAGLADAELLAYDAPDLDLYHPWEID 129
Query: 139 IDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISP 198
D A +A + E + + I N E + + NSHG + Y S+H +S
Sbjct: 130 ADRAIELAAQAEQASLRADKRITNTEGGSFNSHVGIKVFGNSHGMLQSYCSSRHSLSSCV 189
Query: 199 IAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLA 258
IA + M+RD Y+ + L PE +G A+RT+SRL +K+ T K PV+F A +A
Sbjct: 190 IAEQDGNMERDYAYTIGRAFEDLKSPEWVGAECARRTLSRLAPRKLPTMKAPVIFAAEVA 249
Query: 259 FELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKT 318
L ISG+S+YRKSTFL+DS+G++I + I E PH+L S+ FD+EGV+T
Sbjct: 250 TGLFGHLVGAISGSSVYRKSTFLLDSMGQQILPEWLTISEQPHLLKGLASTPFDSEGVRT 309
Query: 319 QKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNT 378
Q R ++K+G++Q + L++YSA+KLG+ +TG++GG H+ I+ + S D+L LK+M T
Sbjct: 310 QARDIIKDGVLQTWLLTSYSARKLGLTSTGHAGGIHNW-RIAGQGHSFDDL---LKQMGT 365
Query: 379 GLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDV 438
GL+VTELMG G++ ITGDYS+GA G+W+ENG IQY V E+TI+G L+ M+ +V IG D+
Sbjct: 366 GLVVTELMGQGVSAITGDYSRGAAGFWVENGVIQYPVSEVTIAGNLKEMWHNMVTIGDDI 425
Query: 439 LTRNSNTSGSILIENMIIAGK 459
TR++ GS+L+ M IAG+
Sbjct: 426 ETRSNIQCGSVLLPEMKIAGQ 446
>gi|54310349|ref|YP_131369.1| peptidase PmbA [Photobacterium profundum SS9]
gi|46914790|emb|CAG21567.1| putative pmbA protein [Photobacterium profundum SS9]
Length = 447
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 175/454 (38%), Positives = 279/454 (61%), Gaps = 12/454 (2%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
R + + + E + L A + A + + N+ G SV R +I+ +E N+D +
Sbjct: 4 REQVAHQRVELEAAVAKALEVAGQ-QADAAEVAINKTTGISVSTRMCEIENVEFNSDGAL 62
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
+ +Y + G++STSD +K++ T+ AA +IAR+T+ D FAG + N
Sbjct: 63 GITVY----RGQRKGSASTSDLSEKAIAQTVAAALDIARYTSEDPFAGPAPAELMAKNIP 118
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
+ L+ P D A IA+ E A +F+ I ++ + + NSHG ++ Y
Sbjct: 119 ELDLFHPDEPEPDFAASIAFAAEQAALDFDPRIKQSDGASYDSHYGVRVYGNSHGMLASY 178
Query: 188 PFSKHIISISPIAIKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
S+H S IA +GK +M+RD Y+S+ +L PE +G +AA+RT+ R+ A+K+S
Sbjct: 179 ASSRHSTSCCVIA-EGKNGQMERDYSYTSSRVASELWTPERVGRHAAERTLGRIDAQKLS 237
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
TR+ P++F A +A L ISG++LYRKS+FL+D LG++IF + I E PHIL
Sbjct: 238 TREAPIMFAADIATGLFGHLIMGISGSNLYRKSSFLLDQLGEQIFPEWLNISERPHILRG 297
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
S+ FD+EG+ T+ ++ +G++Q Y +++Y+A+KLG + TG++GG H+ ++ S +
Sbjct: 298 MASTPFDSEGLATRDLEIITDGVLQTYLMTSYAARKLGQQPTGHAGGIHNWLVKS----T 353
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
++ ++MLKKM+ GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L+
Sbjct: 354 GESFEQMLKKMDRGLLVTELMGQGVNIVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLK 413
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+M K I+AIG+D TR+ +GSIL++ M IAG+
Sbjct: 414 DMMKNIMAIGADTETRSQIQTGSILLDTMKIAGE 447
>gi|383316012|ref|YP_005376854.1| putative Zn-dependent protease-like protein [Frateuria aurantia DSM
6220]
gi|379043116|gb|AFC85172.1| putative Zn-dependent protease-like protein [Frateuria aurantia DSM
6220]
Length = 455
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 170/442 (38%), Positives = 265/442 (59%), Gaps = 9/442 (2%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+L+++++ A+ GAS + + + +G SV VR G+++ +E D+ + +Y K
Sbjct: 23 LAELSEEVIRRARAAGASQAEVAASVDSGLSVNVRLGEVETVEHTRDRGFGLTVYFGQRK 82
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST+D +S+ T+ A IAR+T D +GL D + D LY PW L
Sbjct: 83 ----GSASTADLHPESIQATLEQACAIARYTEEDPASGLADPERMATEFPDLDLYHPWDL 138
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
++A + + E A ++ I N+E V Q + ANSHGFM ++H +S+S
Sbjct: 139 DTEEAIRLGLQIEA-AGRAHAGITNSEGASVQRGQGVTVYANSHGFMGRERGTRHSLSLS 197
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G+ MQRD WY S + +G AA+RT++RL A+ +STR+ PVLF +
Sbjct: 198 LIAGEGQGMQRDYWYDSVRHAGDFMSAQALGEKAAERTLARLGARSLSTRQGPVLFAPEV 257
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+D +G + + ++E P +L S++FD EGV
Sbjct: 258 ARSLIGHLINAVSGGALYRRASFLLDRVGTPVLPEWMSLVERPWLLRGPASAAFDAEGVA 317
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T++ +V+NG +Q Y L +YSA+KLG+ +TGN+GG H+L + + K ML+++
Sbjct: 318 TRESALVENGRLQRYLLGSYSARKLGLASTGNAGGVHNLTVEGGH----GDFKSMLEQLG 373
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGLLVTEL+G G++ +TGDYS+GA G+W+ENG I Y VE ITI+ LQ M I A+G+D
Sbjct: 374 TGLLVTELIGQGVSVVTGDYSRGAAGFWVENGVIAYPVEGITIASTLQEMLPGIRAVGAD 433
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
V R+S +GSILI+ M IAG+
Sbjct: 434 VDPRSSIRTGSILIDKMTIAGE 455
>gi|386019617|ref|YP_005937641.1| PmbA protein [Pseudomonas stutzeri DSM 4166]
gi|327479589|gb|AEA82899.1| PmbA protein [Pseudomonas stutzeri DSM 4166]
Length = 452
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 177/442 (40%), Positives = 275/442 (62%), Gaps = 8/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++ + ++ A++ GAS S + + G S VR+G+++ +E N D+ + +Y+ K
Sbjct: 19 LREKVERIIEEARRQGASASEVSVSMEQGLSTTVRQGEVETVEFNRDQGFGITLYVGQSK 78
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST+ +++ +T+ AA IAR + D FAGL D + D LY PW +
Sbjct: 79 ----GSASTTGSGDEAIRETVAAAMAIARHASQDEFAGLADATLMARELPDLDLYHPWSI 134
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE+ AF+F++ I N + T + T Q NS+GF+ GY ++H +S
Sbjct: 135 TPEQAIEQALSCESAAFDFDARIRNADGTSLNTHQGCRAYGNSNGFIGGYCSTRHSLSCV 194
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD +Y N + L P+ IG AA+R + RL A+ I T + PVLF L
Sbjct: 195 MIAESEGQMQRDYFYDVNRIGEALIDPQTIGRRAAERAVRRLGARPIPTCEVPVLFAPEL 254
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L + F ISG +LYRK+++L D+LG+ +F + + E PHI + GS+S+D +G+
Sbjct: 255 ATGLFSHFIAAISGGNLYRKASYLEDALGQTLFPEWLSLDERPHIPRALGSASYDGDGLA 314
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y LSTYS +KLGM +T N+GG H+L + + ++ +L++M
Sbjct: 315 TYAKPFVENGRLISYVLSTYSGRKLGMPSTANAGGVHNLFV----SHGEEDQAALLRRMG 370
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ+ V+E+TI+G L+++F+QIVAIG D
Sbjct: 371 RGLLVTELMGQGLNLVTGDYSRGAGGYWVENGEIQFPVQEVTIAGNLRDIFRQIVAIGCD 430
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
+ TR + +GS+LIE M++AGK
Sbjct: 431 IETRGNVRTGSVLIERMMVAGK 452
>gi|149910589|ref|ZP_01899227.1| Predicted inactivated Zn-dependent protease [Moritella sp. PE36]
gi|149806317|gb|EDM66292.1| Predicted inactivated Zn-dependent protease [Moritella sp. PE36]
Length = 446
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 186/435 (42%), Positives = 265/435 (60%), Gaps = 13/435 (2%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L++AKK GAS + + + G SV R G+++ +E N+D + + +Y + GN+S
Sbjct: 22 LDFAKKAGASDAEVAISRQTGLSVSTRMGEVENVEFNHDGALGICVY----RGQRKGNAS 77
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD + ++ + AA +IA TA D FAGL D + P D L P + I+ I
Sbjct: 78 TSDLSEAAIQSAVAAALDIALHTAEDEFAGLADFELMAFAPEDLDLCHP--IKIEPEYAI 135
Query: 146 AYRCENE--AFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKG 203
C E A +S IVN+E + T+ S + NSHG ++GY ++H +S IA +
Sbjct: 136 EQACLTERLALAKDSRIVNSEGS-FTSHSSIKVYGNSHGLVNGYASTRHSMSSVLIAEQD 194
Query: 204 KEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLN 263
M+RD YS D KL PE I A RT+ RL A+KI T PV+F +A L+
Sbjct: 195 GAMERDYGYSMARDASKLWTPEQIATEAVNRTVDRLGARKIDTCNVPVIFHHDVASSLMG 254
Query: 264 IFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLV 323
ISG SLYRKS+FL+D LG++IF + I E PHI G SS +D EGV+T+ V
Sbjct: 255 QLVMGISGGSLYRKSSFLLDKLGEQIFPEWLNIQERPHIKGGLASSMYDAEGVRTKDLNV 314
Query: 324 VKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVT 383
V+ GI++ Y L++YS +KLGM+TTG++GG H+ N T + L ++ ++M TGLLVT
Sbjct: 315 VEQGILKSYLLTSYSGRKLGMQTTGHAGGIHNW----NVTGKGETLDQLCRQMGTGLLVT 370
Query: 384 ELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNS 443
ELMG G+N +TGDYS+GA G+W+ENG++QY V EITI+G L +MFK +VA+G+D+ R+S
Sbjct: 371 ELMGQGVNIVTGDYSRGASGFWVENGELQYPVHEITIAGNLTDMFKNLVAVGNDIDIRSS 430
Query: 444 NTSGSILIENMIIAG 458
GS L+E+M IAG
Sbjct: 431 ILMGSTLLESMQIAG 445
>gi|30065477|ref|NP_839648.1| peptidase PmbA [Shigella flexneri 2a str. 2457T]
gi|30043741|gb|AAP19460.1| putative peptide maturation protein [Shigella flexneri 2a str.
2457T]
Length = 450
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 265/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + + L+ P +S D+A +A R E A
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKELLAFDAPNLDLFHPAEVSPDEAIELAARAEQAALQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H + IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLFSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 272 KSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|304414061|ref|ZP_07395429.1| putative peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Candidatus Regiella
insecticola LSR1]
gi|304283275|gb|EFL91671.1| putative peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Candidatus Regiella
insecticola LSR1]
Length = 477
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 177/443 (39%), Positives = 266/443 (60%), Gaps = 6/443 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+Q + L A + + + + + G S+ R K++ +E N+D + + +Y Q K
Sbjct: 40 LEQAVEHALQLAS-LSSDAAEVAITKTTGISISTRSSKVENVEFNSDGALGITVYHQQRK 98
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++S++D ++ T+ AA +IA T+SD F+G+ D+ L D L L
Sbjct: 99 ----GSASSTDLSPHAIERTVKAALDIAHHTSSDPFSGIADKELLAFEAPDLDLLHASDL 154
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+D +A + E A +F+ I ++E + NSHG + Y S++ +S S
Sbjct: 155 DVDHGIKLAAQAEQTALSFDKCITHSEGGNFNNHYGIRVFGNSHGMLQSYCSSRYSLSCS 214
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA K +M+RD YS + L PE IG A+R +SRL K+STRK PVLF A +
Sbjct: 215 VIAEKDGQMERDYAYSVSRKISDLKNPEWIGQECARRALSRLGTVKLSTRKAPVLFAAEV 274
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L ISG ++YRKSTFL++ LGK+I + I E PH+LG SS FD+EG++
Sbjct: 275 ATGLFGHLVSAISGGNIYRKSTFLLNHLGKQILPDWLTIEEKPHLLGGLASSPFDSEGLR 334
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISN-KTKSSDNLKEMLKKM 376
T + +VK+G++Q Y LS+YSA+KLG+K+TG++GG H+ +I S K + MLK++
Sbjct: 335 TVTQDIVKDGVLQTYLLSSYSARKLGLKSTGHAGGIHNWLISSQEKDFQKKDFTSMLKQL 394
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
TGLLVTELMGDG+N +TGDYS+GA G+W++ GKIQY V ITI+G L++M + IV+IGS
Sbjct: 395 GTGLLVTELMGDGVNTVTGDYSRGAAGFWVDKGKIQYPVSGITIAGNLKDMLRNIVSIGS 454
Query: 437 DVLTRNSNTSGSILIENMIIAGK 459
D+ TR++ GS+L+ M IAG+
Sbjct: 455 DIETRSNIQCGSVLLRPMKIAGE 477
>gi|398869917|ref|ZP_10625273.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM74]
gi|398210038|gb|EJM96695.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM74]
Length = 448
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 176/441 (39%), Positives = 268/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEARRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS ++ +T+ AA IA+ T+ D +GL D + + DF L+ W +
Sbjct: 75 ----GSASTSASGPDAIRETVAAALAIAKHTSEDEASGLADAALMARDIQDFDLFHQWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF + I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAIEQALACEAAAFAADIRIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L P IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGNLLADPVSIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG SLYRKS+FL +LG+K+F + I E PH++ + GS++FD +G+
Sbjct: 251 AGGLFGSFLSAISGGSLYRKSSFLEGTLGQKLFPEWLTIDERPHLMRAMGSAAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TYS +KLGM +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVEKGELVSYILGTYSGRKLGMPSTANAGGVHNLFV----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ++V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLLVTELMGQGLNMVTGDYSRGAAGYWVENGEIQFAVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|290476784|ref|YP_003469695.1| hypothetical protein XBJ1_3815 [Xenorhabdus bovienii SS-2004]
gi|289176128|emb|CBJ82933.1| putative enzyme for maturation of Microcin B17 and degradation of
CcdA [Xenorhabdus bovienii SS-2004]
Length = 447
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/450 (38%), Positives = 272/450 (60%), Gaps = 12/450 (2%)
Query: 13 YSKSEFQQLAQDMLNYA---KKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNV 69
Y + +QL +D +++A K G+ + + N+ G SV R +++ +E N+D + +
Sbjct: 7 YIAEQRKQL-EDAVSHALELAKTGSDAAEVAVNKTTGISVSTRFSEVENVEFNSDGALGI 65
Query: 70 IIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDF 129
+Y Q K G++S++D +++ T+ AA +IAR+T+ D +AG D++ L D
Sbjct: 66 TVYHQQRK----GSASSTDLSPEAIARTVQAAIDIARYTSPDPYAGPADKDLLAFAAPDL 121
Query: 130 KLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPF 189
L+ P L D A +A R E + + I N E ++ + NSHG + Y
Sbjct: 122 DLFHPADLDTDIAIELAARAEQASLQADQRITNTEGGSFSSHYGIRIFGNSHGMLQSYCS 181
Query: 190 SKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKC 249
S+H +S IA + M+RD Y+ + +L PE +G A+RT+SRL A+K+ T K
Sbjct: 182 SRHSLSSCVIAEQDGNMERDYAYTVSRRFDELQSPEWVGQECARRTLSRLGARKLPTMKA 241
Query: 250 PVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSS 309
PV+F A +A L ISG+S+YRKS+FL+DSLGK+I S + I E PH+L S+
Sbjct: 242 PVIFSAEVATGLFGHLVGAISGSSIYRKSSFLLDSLGKQILPSWLTIEEQPHLLRGLAST 301
Query: 310 SFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNL 369
FD+EGV+T R ++K G++Q + L++YSA+KLGM TG++GG H+ I +
Sbjct: 302 PFDSEGVRTAPRDIIKEGVLQTWLLTSYSARKLGMVNTGHAGGIHNWRIAGQ----GQDF 357
Query: 370 KEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFK 429
+L++M TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L++M+
Sbjct: 358 AALLREMGTGLIVTELMGQGVSAVTGDYSRGASGFWVENGEIQYPVSEITIAGNLKDMWA 417
Query: 430 QIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+V +G D+ TR++ GS+L+ M IAG+
Sbjct: 418 NMVTVGDDIETRSNIQCGSVLLPEMSIAGQ 447
>gi|251793150|ref|YP_003007878.1| PmbA protein [Aggregatibacter aphrophilus NJ8700]
gi|422336684|ref|ZP_16417657.1| pmbA [Aggregatibacter aphrophilus F0387]
gi|247534545|gb|ACS97791.1| PmbA protein [Aggregatibacter aphrophilus NJ8700]
gi|353345996|gb|EHB90283.1| pmbA [Aggregatibacter aphrophilus F0387]
Length = 453
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 172/433 (39%), Positives = 274/433 (63%), Gaps = 8/433 (1%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
+ A+K GA+ + + + G SV R +I+ +E NND + + +Y+ K GN+S
Sbjct: 28 IEIAQKAGAA-AEVGVTKSGGLSVSTRLKEIENVEFNNDGALGISVYLGQQK----GNAS 82
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ +T+ AA IA++T+ D+ AGL D+ + + D LY + +D A +
Sbjct: 83 TSDLSPEAIKNTVEAALAIAKYTSPDDCAGLADKELMAFDAPDLDLYHAADIDVDRAAQL 142
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE 205
A E A F+ IVN+E + NSHG + Y S++ +S S IA +
Sbjct: 143 ALETEKAALEFDKRIVNSEGASFNAHTGVRVYGNSHGMLQSYLSSRYSLSCSVIAEHENQ 202
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
++RD Y+ + + L+ + +G AA++TI+RL+ +KI+T++ PV+F +A L++
Sbjct: 203 LERDYEYTVSRNINSLESAQWVGENAAQKTIARLQPQKIATQQAPVIFLNDVATGLISHL 262
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
A ISG SLYRK++FL+D LGK++ I E PH++ S+ FD+EGV+TQ +++
Sbjct: 263 AAAISGGSLYRKASFLLDHLGKQVLPDWFHISEKPHLIDRLASTPFDSEGVRTQDLEIIR 322
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
GI+Q Y L++YS +KLGM++TG++GG H+ ++ N SS L +L++M GLLVTE+
Sbjct: 323 QGILQTYLLTSYSGRKLGMQSTGHAGGIHNWLVQPN---SSGKLTALLRQMERGLLVTEV 379
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+LQ+M + IVA+G D+ R++
Sbjct: 380 MGQGVNLVTGDYSRGAAGFWVENGEIQYPVAEITIAGRLQDMLRNIVAVGDDIEHRSNIQ 439
Query: 446 SGSILIENMIIAG 458
+GSIL+ENM I+G
Sbjct: 440 TGSILLENMKISG 452
>gi|161617724|ref|YP_001591689.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|161367088|gb|ABX70856.1| hypothetical protein SPAB_05587 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 446
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 166/423 (39%), Positives = 262/423 (61%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G +RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 208 AMADLQAPEWVGAECTRRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 268 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTN 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|206580969|ref|YP_002240808.1| peptidase PmbA [Klebsiella pneumoniae 342]
gi|288937463|ref|YP_003441522.1| peptidase U62 modulator of DNA gyrase [Klebsiella variicola At-22]
gi|290512203|ref|ZP_06551570.1| PmbA protein [Klebsiella sp. 1_1_55]
gi|206570027|gb|ACI11803.1| protein PmbA [Klebsiella pneumoniae 342]
gi|288892172|gb|ADC60490.1| peptidase U62 modulator of DNA gyrase [Klebsiella variicola At-22]
gi|289775198|gb|EFD83199.1| PmbA protein [Klebsiella sp. 1_1_55]
Length = 450
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/453 (38%), Positives = 273/453 (60%), Gaps = 11/453 (2%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHS---SIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
K I ++ ++ ++ + A ++ A S + ++ G V R G+++ +E N+D
Sbjct: 6 KVISQVAQQRKTLEEAVTTALELAAGKSDGAEVSVSKTTGIGVSTRYGEVENVEFNSDGA 65
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +Y Q+ K G++S++D ++ T+ AA +IAR+T+ D FAG+ D+ L +
Sbjct: 66 LGITVYHQNRK----GSASSTDLSPDAIARTVQAALDIARYTSPDPFAGVADKELLAFDA 121
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D L+ P +S D+A +A R E A + I N E + + NSHG +
Sbjct: 122 PDLDLFHPAEVSPDEAIELAARAEQAALKADKRITNTEGGSFNSHYGIKVFGNSHGMLQS 181
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
Y ++H +S IA +M+RD Y+ + L PE +G A+RT+SRL +K+ST
Sbjct: 182 YCSTRHSLSSCVIAEDDGDMERDYAYTIGRAIEDLQSPEWVGEECARRTLSRLAPRKLST 241
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
K PV+F +A L I+G S+YRKSTFL+DSLGK+I + I E PH+L
Sbjct: 242 MKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFLLDSLGKQILPEWLTIEEHPHLLKGL 301
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
S+ FD+EGV+T++R ++K+G++ + L+ YSA+KLGMK+TG++GG H+ I
Sbjct: 302 ASTPFDSEGVRTERRDIIKDGVLTQWLLTNYSARKLGMKSTGHAGGIHNWRINGRGL--- 358
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+ +MLK+M TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L+
Sbjct: 359 -SFAKMLKEMGTGLVVTELMGQGVSGVTGDYSRGASGFWVENGEIQYPVSEITIAGNLKE 417
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ IV IG D+ TR++ GS+L+ M IAG+
Sbjct: 418 MWRNIVTIGDDIETRSNIQCGSVLLPEMKIAGQ 450
>gi|437179162|ref|ZP_20705220.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437901276|ref|ZP_20849837.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|438103671|ref|ZP_20865479.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|445195344|ref|ZP_21400404.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445220477|ref|ZP_21402960.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|435151591|gb|ELN38231.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435321128|gb|ELO93565.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|435322687|gb|ELO94874.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|444865590|gb|ELX90358.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444870586|gb|ELX95076.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
Length = 446
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 166/423 (39%), Positives = 262/423 (61%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+ + D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 88 TVQAALDIARYMSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 208 AMADLQAPEWVGAECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 268 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLMQWLLTN 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|197250065|ref|YP_002149355.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|440765436|ref|ZP_20944454.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Agona
str. SH11G1113]
gi|440766794|ref|ZP_20945782.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Agona
str. SH08SF124]
gi|440771787|ref|ZP_20950698.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Agona
str. SH10GFN094]
gi|197213768|gb|ACH51165.1| protein PmbA [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|436413082|gb|ELP11019.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Agona
str. SH11G1113]
gi|436420423|gb|ELP18287.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Agona
str. SH10GFN094]
gi|436422125|gb|ELP19964.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Agona
str. SH08SF124]
Length = 446
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 166/423 (39%), Positives = 262/423 (61%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 208 AMADLQAPEWVGAECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+ ++R +VK+G++ + L+
Sbjct: 268 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRMERRDIVKDGVLTQWLLTN 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|389798368|ref|ZP_10201387.1| putative Zn-dependent protease-like protein [Rhodanobacter sp.
116-2]
gi|388445190|gb|EIM01272.1| putative Zn-dependent protease-like protein [Rhodanobacter sp.
116-2]
Length = 455
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 172/461 (37%), Positives = 271/461 (58%), Gaps = 8/461 (1%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIE 60
M ++ ++ + ++ +LA+D++ A+ GAS + + + G SV VR G+++ +E
Sbjct: 1 MSEVAISQDRSLHELDRLAELAEDVIRRARAAGASQAEVAASIDTGLSVNVRLGEVETVE 60
Query: 61 QNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDEN 120
D+ + +Y K G++ST+D S+ T+ A IAR+T +D AGL D
Sbjct: 61 HTRDRGFGLTVYFGQRK----GSASTADLHPDSIQATLEQACAIARYTEADPAAGLADAA 116
Query: 121 TLEMNPLDFKLYTPWFLSIDDAKLIAYRCENE-AFNFNSLIVNNENTGVTTQQSHFLLAN 179
+ D L+ PW +ID A+ IA E A ++ I N++ V + + AN
Sbjct: 117 RMATAFPDLDLWHPW--AIDTAQAIALGVAIEDAGRAHAGISNSDGASVQAGEGLSVYAN 174
Query: 180 SHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRL 239
SHGF+ ++H +S++ IA +G MQRD WY S + +G AA+RT++R+
Sbjct: 175 SHGFVGRERGTRHALSLALIAGEGDGMQRDYWYDSVRAASDFISAQALGDKAAERTLARM 234
Query: 240 KAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIED 299
A+ +STR+CPVLF LA L+ +SG +LYR+++FL+D GK+I + + I E
Sbjct: 235 GARSLSTRQCPVLFAPELARGLVGHLLGAVSGGALYRQASFLLDHAGKRIMPAWLNIDER 294
Query: 300 PHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIII 359
P + GS +FD EGV T +V+ G++ Y L +YSA+KLG+ +TGN+GG H+LI+
Sbjct: 295 PRLPRGQGSGNFDAEGVATVDGALVEGGVLARYVLGSYSARKLGLPSTGNAGGVHNLIVE 354
Query: 360 SNKTKSS-DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEI 418
+ ML+++ GLLVTE+MG G++ +TGDYS+GA G+W+ENG I Y VE I
Sbjct: 355 PGSVDGERSDFDGMLQRLGNGLLVTEVMGQGVSTVTGDYSRGAAGFWVENGAIAYPVEGI 414
Query: 419 TISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
TI+ L++MF IVA+G+DV R+ +GSIL+E M +AG+
Sbjct: 415 TIAANLRDMFAGIVAVGADVDPRSHILTGSILLERMTVAGE 455
>gi|409248131|ref|YP_006888823.1| Protein pmbA [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|320088865|emb|CBY98623.1| Protein pmbA [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 473
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/423 (39%), Positives = 262/423 (61%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 59 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 114
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 115 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKA 174
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 175 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 234
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 235 AMADLQAPEWVGAECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 294
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+ SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 295 KSTFLLDSLGKQILPEWLTIEEHPHLRKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTN 354
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 355 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGD 410
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR++ GS+L+ M I
Sbjct: 411 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKI 470
Query: 457 AGK 459
AG+
Sbjct: 471 AGQ 473
>gi|257464638|ref|ZP_05629009.1| antibiotic maturation factor [Actinobacillus minor 202]
gi|257450298|gb|EEV24341.1| antibiotic maturation factor [Actinobacillus minor 202]
Length = 449
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 180/445 (40%), Positives = 277/445 (62%), Gaps = 8/445 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + LN+AKK GA + + + G SV R +++ IE NND ++ + +Y+
Sbjct: 13 EQELRQAVEFALNFAKKAGA-EAEVSVTKVAGLSVSSRLEQVENIEFNNDGSLGISVYL- 70
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
GK+ GN+STSD S+ + +A IA++T+ D GL D+ + D +LY
Sbjct: 71 -GKRK--GNASTSDLQTASIQRAVESALAIAKYTSEDECTGLADKEEMAFEVPDLELYHQ 127
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+S++ A +A + EN A N + IVN+E + + N+HG + Y S++ +
Sbjct: 128 ADISVEQALEMAIKTENAALNADEHIVNSEGASFNSHSGVRVYGNTHGMLQSYLSSRYSL 187
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S I+ +++RD Y+ + + +KL PE +G AA + + RL +KI T + PV++
Sbjct: 188 SCSVISAYEDQLERDYEYTISREFEKLQSPEWVGQQAAFKAVDRLNPQKIKTCEVPVIYY 247
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L+ A ISG +LYRKS+FL+D LGK+I I E PH+L SS+FD+E
Sbjct: 248 NDVATGLVGHLAGAISGGALYRKSSFLLDHLGKQILPEWFAISERPHLLRQLASSAFDSE 307
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GVKTQ R ++ G++Q Y +++YSA+K+G+KTTG++GG H+ ++ N+T D L LK
Sbjct: 308 GVKTQNREIITEGVLQTYLMTSYSARKMGLKTTGHAGGIHNWLVKPNRTGGLDAL---LK 364
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGLLVTE +G IN +TG+YS+GA G+W+ENG+IQY V EITI+G+LQ MFK IVA+
Sbjct: 365 EMGTGLLVTEFLGSAINAVTGEYSRGAAGFWVENGEIQYPVAEITIAGQLQEMFKNIVAV 424
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
DV R++ +GSILIE M ++G+
Sbjct: 425 ADDVEHRSNIQTGSILIEKMKVSGE 449
>gi|117618121|ref|YP_858375.1| protein PmbA [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117559528|gb|ABK36476.1| protein PmbA [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 447
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/443 (40%), Positives = 262/443 (59%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ + + + L AK +GA + + ++ G SV R +++ IE N D + + +Y +D
Sbjct: 12 AHLEAVVAEALEIAKGLGAGLAEVSISKQTGLSVNTRGCELESIEFNKDGALGIAVY-RD 70
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
G K G+SST+D ++ + AA IAR T+ D AGL D L + D +L P
Sbjct: 71 GCK---GSSSTTDLSPSAIRAAVEAAMEIARHTSPDACAGLADAELLAWDAPDLQLCHPI 127
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L +A CE A ++ I +++ G ++ + NSHGF+ GY S++ +S
Sbjct: 128 ELDPQRGIELAIECERLALGRDTRIKHSDGAGFSSHLGIKVYGNSHGFVKGYAASRNSLS 187
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD YSS+ L P+ I A +RT+SRL A+KISTR PVLF
Sbjct: 188 CVLIGEQDGDMQRDYGYSSSRTLDGLWSPQRIADEAVERTLSRLGARKISTRHAPVLFHP 247
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
A L ISG +LYRKS+FL+D LGK+I + I E PH+LG S+ FD EG
Sbjct: 248 DTAAGLWGHLVMAISGGNLYRKSSFLLDKLGKQILPEWLTIQEFPHLLGGLASTPFDGEG 307
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V T+ +V+NG + + L++YSA+KLG+ TTG++GG H+ + S + + MLK+
Sbjct: 308 VLTRDMDIVRNGELMSWLLTSYSARKLGLTTTGHAGGIHNWQVSS----TGQDFNGMLKE 363
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGLLVTELMG G+N + GDYS+GA G+W+ENG+I Y VEEITI+G L MF IVA+G
Sbjct: 364 MGTGLLVTELMGQGVNIVNGDYSRGAAGFWVENGEIAYPVEEITIAGNLAEMFSHIVAVG 423
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
SD R+S +GS+L+E+M +AG
Sbjct: 424 SDEDERSSLKTGSVLVESMKLAG 446
>gi|340001763|ref|YP_004732647.1| PmbA protein [Salmonella bongori NCTC 12419]
gi|339515125|emb|CCC32903.1| putative PmbA protein [Salmonella bongori NCTC 12419]
Length = 450
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/423 (39%), Positives = 263/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKALLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 212 AMDDLQAPEWVGAECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 272 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTN 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQLLKEMGTGLVVTELMGQGVSGITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|205359896|ref|ZP_02833143.2| protein PmbA [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205342327|gb|EDZ29091.1| protein PmbA [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
Length = 446
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/423 (39%), Positives = 262/423 (61%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 208 AMADLQAPEWVGAECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+ SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 268 KSTFLLDSLGKQILPEWLTIEEHPHLRKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTN 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGQ 446
>gi|424669650|ref|ZP_18106675.1| hypothetical protein A1OC_03264 [Stenotrophomonas maltophilia
Ab55555]
gi|401071721|gb|EJP80232.1| hypothetical protein A1OC_03264 [Stenotrophomonas maltophilia
Ab55555]
Length = 455
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 170/438 (38%), Positives = 270/438 (61%), Gaps = 8/438 (1%)
Query: 21 LAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMF 80
L+Q +L+ A+ +GAS + + +E G V VR G+++ ++ D+ + V +Y K
Sbjct: 24 LSQQLLDRARALGASQAEVSCSEDRGLEVNVRLGEVETVQSTRDRGIAVTVYFGQRK--- 80
Query: 81 YGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSID 140
G++ST D + SL T+ A IAR T D AGL + + + D + PW L D
Sbjct: 81 -GSASTGDLNEASLAATVEQACAIARHTEDDAAAGLAEAALMATHFPDLDGWHPWALQAD 139
Query: 141 DAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIA 200
+A +A CE ++ I N++ V++ QS + ANSHGF+ + H + + IA
Sbjct: 140 EAVDLALACEAAGREADAQIRNSDGASVSSMQSLSVYANSHGFIGRERGTHHSVGCALIA 199
Query: 201 IKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFE 260
+G MQRD WY+S + L+ +++G AA+RT++RL+ + ++T PVLF +A
Sbjct: 200 GQGDGMQRDGWYTSALAREDLEDVDLVGRRAAERTVARLQPRSLATGSMPVLFAPEVARS 259
Query: 261 LLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQK 320
L+ +SG +LYR+++FL+DS+G+++F +QI E PH+ S++FD +GV T+
Sbjct: 260 LVGHLLSAVSGGALYRQASFLLDSVGQRLFPEWMQIEELPHLRRGLRSAAFDGDGVATRA 319
Query: 321 RLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGL 380
+V++G++Q Y L +YSA+KLG++TT N+GG H+L + +N + L ++ ++M GL
Sbjct: 320 SALVRDGVLQRYVLGSYSARKLGLQTTANAGGVHNLQLAAN----AGPLHDIARQMGDGL 375
Query: 381 LVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLT 440
LVTELMG G+N +TGDYS+GA G+ +ENG+IQY V+ ITI+G L+ MF I A+GSDV
Sbjct: 376 LVTELMGQGVNGVTGDYSRGAGGFRVENGEIQYPVDGITIAGNLREMFSSIEAVGSDVDP 435
Query: 441 RNSNTSGSILIENMIIAG 458
R+ +GSIL+ M IAG
Sbjct: 436 RSHIRTGSILLGRMTIAG 453
>gi|157147790|ref|YP_001455109.1| peptidase PmbA [Citrobacter koseri ATCC BAA-895]
gi|157084995|gb|ABV14673.1| hypothetical protein CKO_03594 [Citrobacter koseri ATCC BAA-895]
Length = 450
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 264/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVSVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D++ L D L+ P ++ D+A +A R E +
Sbjct: 92 TVQAALDIARYTSPDPCAGVADKDLLAFEAPDLDLFHPAEVTPDEAIDLAARAEQVSLQA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEEKGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 212 ALGDLQTPEWVGAECARRTLSRLAPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 272 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTN 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQLLKEMGTGLVVTELMGQGVSGITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|383310786|ref|YP_005363596.1| peptide maturation protein PmbA [Pasteurella multocida subsp.
multocida str. HN06]
gi|386834778|ref|YP_006240095.1| antibiotic maturation factor, putative [Pasteurella multocida
subsp. multocida str. 3480]
gi|417853534|ref|ZP_12498899.1| hypothetical protein AAUPMG_00729 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|338219342|gb|EGP05018.1| hypothetical protein AAUPMG_00729 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|380872058|gb|AFF24425.1| peptide maturation protein PmbA [Pasteurella multocida subsp.
multocida str. HN06]
gi|385201481|gb|AFI46336.1| antibiotic maturation factor, putative [Pasteurella multocida
subsp. multocida str. 3480]
Length = 451
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/433 (39%), Positives = 277/433 (63%), Gaps = 8/433 (1%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
++ A+K GA+ + + + +G SV R +I+ +E ND + + +Y+ + K GN+S
Sbjct: 26 VDMAQKAGAT-AEVAVTKVSGLSVSTRLQEIENVEFTNDGALGISVYLGNQK----GNAS 80
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ +T+ AA +IA++T+ D AGL D + + + D LY + ++ A +
Sbjct: 81 TSDLSPEAIKNTVEAAISIAKYTSPDECAGLADYDLMAFDAPDLALYHAADIDVEKATAL 140
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE 205
A E A N++ IVN+E + + N+HG + Y S++ +S S IA +
Sbjct: 141 ALETEQAALNYDKRIVNSEGAAFNSHTGVRVYGNTHGMLQSYLSSRYSLSCSVIAGVEDQ 200
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
++RD Y+ + D +L+ +G + AK+T+SRL+ +K++T++ PV+F +A L++
Sbjct: 201 LERDYEYTISRDLNQLESASWVGEHCAKKTLSRLQPQKMATQQVPVIFLNDVATGLISHL 260
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
ISG SLYRKS+FL+D LGK++ I E PH++G SS FD+EGV+TQ R ++K
Sbjct: 261 TAAISGGSLYRKSSFLLDHLGKQVLPDWFHISEQPHLIGQLASSPFDSEGVRTQCREIIK 320
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
G +Q Y L++YS KKLGM++TG++GG H+ ++ N T L +L++M TGLLVT+L
Sbjct: 321 QGTLQTYLLTSYSGKKLGMRSTGHAGGIHNWLVKPNTT---GGLTTLLRQMGTGLLVTDL 377
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+L+ M + IVA+G D+ R++
Sbjct: 378 MGQGVNLVTGDYSRGAAGFWVENGEIQYPVAEITIAGQLKEMLRNIVAVGDDIEHRSNIQ 437
Query: 446 SGSILIENMIIAG 458
+GSIL+E++ ++G
Sbjct: 438 TGSILLEHLKVSG 450
>gi|419761514|ref|ZP_14287767.1| protein PmbA [Klebsiella pneumoniae subsp. pneumoniae DSM 30104]
gi|397745702|gb|EJK92907.1| protein PmbA [Klebsiella pneumoniae subsp. pneumoniae DSM 30104]
Length = 473
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/453 (38%), Positives = 273/453 (60%), Gaps = 11/453 (2%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHS---SIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
K I ++ ++ ++ + A ++ A S + ++ G V R G+++ +E N+D
Sbjct: 29 KVISQVAQQRKTLEEAVTTALELAAGKSDGAEVSVSKTTGIGVSTRYGEVENVEFNSDGA 88
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +Y Q+ K G++S++D ++ T+ AA +IAR+T+ D FAG+ D++ L +
Sbjct: 89 LGITVYHQNRK----GSASSTDLSPDAIARTVQAALDIARYTSPDPFAGVADKDLLAFDA 144
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D L+ P +S DDA +A R E A + I N E + + NSHG +
Sbjct: 145 PDLDLFHPAEVSPDDAIELAARAEQAALKADKRITNTEGGSFNSHYGIKVFGNSHGMLQS 204
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
Y ++H +S IA +M+RD Y+ + L PE +G A+RT+SRL +K+ST
Sbjct: 205 YCSTRHSLSSCVIAEDDGDMERDYAYTIGRAIEDLQSPEWVGEECARRTLSRLAPRKLST 264
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
K PV+F +A L I+G ++YRK TFL+DSLGK+I + I E PH+L
Sbjct: 265 MKAPVIFANEVATGLFGHLVGAIAGGAVYRKLTFLLDSLGKQILPEWLTIEEHPHLLKGL 324
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
S+ FD+EGV+T++R +VK+G++ + L+ YSA+KLGMK+TG++GG H+ I
Sbjct: 325 ASTPFDSEGVRTERRDIVKDGVLTQWLLTNYSARKLGMKSTGHAGGIHNWRINGRGL--- 381
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+ +MLK+M TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L+
Sbjct: 382 -SFAKMLKEMGTGLVVTELMGQGVSGVTGDYSRGASGFWVENGEIQYPVSEITIAGNLKE 440
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ IV IG D+ TR++ GS+L+ M IAG+
Sbjct: 441 MWRNIVTIGDDIETRSNIQCGSVLLPEMKIAGQ 473
>gi|416893586|ref|ZP_11924736.1| TldD protein [Aggregatibacter aphrophilus ATCC 33389]
gi|347813876|gb|EGY30529.1| TldD protein [Aggregatibacter aphrophilus ATCC 33389]
Length = 453
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 172/433 (39%), Positives = 272/433 (62%), Gaps = 8/433 (1%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
+ A+K GA+ + + + G SV R +I+ +E NND + + +Y+ K GN+S
Sbjct: 28 IEIAQKAGAA-AEVGVTKSGGLSVSTRLKEIENVEFNNDGALGISVYLGQQK----GNAS 82
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ +T+ AA IA++T+ D+ AGL D+ + + D LY + +D +
Sbjct: 83 TSDLSPEAIKNTVEAALAIAKYTSPDDCAGLADKELMAFDAPDLDLYHAADIDVDRVAQL 142
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE 205
A E A F+ IVN+E + NSHG + Y S + +S S IA +
Sbjct: 143 ALETEKAALEFDKRIVNSEGASFNAHTGVRVYGNSHGMLQSYLSSHYSLSCSVIAEHENQ 202
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
++RD Y+ + + L+ + +G AA++TI+RL+ +KI+T++ PV+F +A L++
Sbjct: 203 LERDYEYTVSRNINSLESAQWVGENAAQKTIARLQPQKIATQQAPVIFLNDVATGLISHL 262
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
A ISG SLYRK++FL+D LGK++ I E PH++G S+ FD+EGV+TQ V++
Sbjct: 263 AAAISGGSLYRKASFLLDHLGKQVLPDWFHINEKPHLIGRLASTPFDSEGVRTQDLEVIR 322
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
GI+Q Y L++YS +KLGM++TG++GG H+ ++ N SS L +L++M GLLVTE+
Sbjct: 323 QGILQTYLLTSYSGRKLGMQSTGHAGGIHNWLVQPN---SSGKLTALLRQMERGLLVTEV 379
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
MG G+N +TGDYS+GA G+W+ENG+IQY V EIT +G+LQ+M + IVA+G D+ R++
Sbjct: 380 MGQGVNLVTGDYSRGAAGFWVENGEIQYPVAEITTAGRLQDMLRNIVAVGDDIEHRSNIQ 439
Query: 446 SGSILIENMIIAG 458
+GSIL+ENM I+G
Sbjct: 440 TGSILLENMKISG 452
>gi|190575337|ref|YP_001973182.1| modulator of DNA gyrase [Stenotrophomonas maltophilia K279a]
gi|190013259|emb|CAQ46893.1| putative modulator of DNA gyrase [Stenotrophomonas maltophilia
K279a]
gi|456736908|gb|EMF61634.1| TldE/PmbA protein [Stenotrophomonas maltophilia EPM1]
Length = 455
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 170/438 (38%), Positives = 270/438 (61%), Gaps = 8/438 (1%)
Query: 21 LAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMF 80
L+Q +L+ A+ +GAS + + +E G V VR G+++ ++ D+ + V +Y K
Sbjct: 24 LSQQLLDRARALGASQAEVSCSEDRGLEVNVRLGEVETVQSTRDRGIAVTVYFGQRK--- 80
Query: 81 YGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSID 140
G++ST D + SL T+ A IAR T D AGL + + + D + PW L D
Sbjct: 81 -GSASTGDLNEASLAATVEQACAIARHTEDDAAAGLAEAALMATHFPDLDGWHPWALQAD 139
Query: 141 DAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIA 200
+A +A CE ++ I N++ V++ QS + ANSHGF+ + H + + IA
Sbjct: 140 EAVDLALACEAAGREADAQIRNSDGASVSSMQSLSVYANSHGFIGRERGTHHSVGCALIA 199
Query: 201 IKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFE 260
+G MQRD WY+S + L+ ++G AA+RT++RL+ + ++T PVLF +A
Sbjct: 200 GQGDGMQRDGWYTSALAREDLEDVGLVGRRAAERTVARLQPRSLATGSMPVLFAPEVARS 259
Query: 261 LLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQK 320
L+ +SG +LYR+++FL+DS+G+++F +QI E PH+ S++FD +GV T+
Sbjct: 260 LVGHLLSAVSGGALYRQASFLLDSVGQRLFPEWMQIEELPHLRRGLRSAAFDGDGVATRA 319
Query: 321 RLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGL 380
+V++G++Q Y L +YSA+KLG++TT N+GG H+L + +N + L+++ ++M GL
Sbjct: 320 SALVRDGVLQRYVLGSYSARKLGLQTTANAGGVHNLQLAAN----AGPLQDIARQMGDGL 375
Query: 381 LVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLT 440
LVTELMG G+N +TGDYS+GA G+ +ENG+IQY V+ ITI+G L+ MF I A+GSDV
Sbjct: 376 LVTELMGQGVNGVTGDYSRGAGGFRVENGEIQYPVDGITIAGNLREMFSSIEAVGSDVDP 435
Query: 441 RNSNTSGSILIENMIIAG 458
R+ +GSIL+ M IAG
Sbjct: 436 RSHIRTGSILLGRMTIAG 453
>gi|237729163|ref|ZP_04559644.1| peptidase PmbA [Citrobacter sp. 30_2]
gi|226908892|gb|EEH94810.1| peptidase PmbA [Citrobacter sp. 30_2]
Length = 473
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 264/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 59 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 114
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P +S D+A +A R E A
Sbjct: 115 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQA 174
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NS+G + GY ++H +S IA + +M+RD Y+
Sbjct: 175 DKRITNTEGGSFNSHYGIKVFGNSYGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 234
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 235 AMGDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 294
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R ++K+G++ + L+
Sbjct: 295 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIIKDGVLTQWLLTN 354
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 355 YSARKLGLKSTGHAGGIHNWRIPGQGL----SFEQLLKEMGTGLVVTELMGQGVSGITGD 410
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 411 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 470
Query: 457 AGK 459
AG+
Sbjct: 471 AGQ 473
>gi|386822779|ref|ZP_10109977.1| peptidase PmbA [Serratia plymuthica PRI-2C]
gi|386380355|gb|EIJ21094.1| peptidase PmbA [Serratia plymuthica PRI-2C]
Length = 446
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/455 (38%), Positives = 270/455 (59%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K ++ + +Q L A+ G+ + + + G SV R G+++ +E N+D
Sbjct: 1 MKVVTQVAEQRKALEQAVSQALELARA-GSDAAEVAVTKSTGISVSTRFGEVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q K G++S++D ++ T+ AA +IAR+T++D AG +++ L
Sbjct: 60 GALGITVYHQQRK----GSASSTDLSPDAIARTVQAALDIARYTSADPNAGPAEKDLLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
D L+ P L + +A R E + + I N E + + NSHG +
Sbjct: 116 EAPDLDLFHPAELDAERGIELAARAEQASLAADKRITNTEGGSFNSHYGIKVFGNSHGML 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S+H +S IA +M+RD Y+ L PE +G A+RT+SRL +K+
Sbjct: 176 QSYCSSRHSLSSCVIAEHNGDMERDYAYTIGRAMGDLASPEWVGEECARRTLSRLGPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
ST PVLF + +A L ISG+S+YRKSTFL+DSLGK+I + I E PH+L
Sbjct: 236 STMTAPVLFASEVATGLFGHLVGAISGSSVYRKSTFLLDSLGKQILPDWLTIEEHPHLLK 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+TQ+R +VK+G++Q + L++YSA+KLGM +TG++GG H+ I
Sbjct: 296 GLASTPFDSEGVRTQRRDIVKDGVLQTWLLTSYSARKLGMHSTGHAGGIHNWRIAGQ--- 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ MLK++ TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L
Sbjct: 353 -GHDFTGMLKQLGTGLVVTELMGQGVSGITGDYSRGAAGFWVENGEIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M + IV++GSD+ TR++ GS+L+ +M IAG+
Sbjct: 412 KDMLRNIVSVGSDIETRSNIQCGSVLLPDMKIAGQ 446
>gi|424840392|ref|ZP_18265029.1| peptidase PmbA [Shigella flexneri 5a str. M90T]
gi|383469444|gb|EID64465.1| peptidase PmbA [Shigella flexneri 5a str. M90T]
Length = 423
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 9 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 64
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + + L+ P +S D+A +A R E A
Sbjct: 65 TVQAALDIARYTSPDPCAGVADKELLAFDAPNLDLFHPAEVSPDEAIELAARAEQAALQA 124
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 125 DKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 184
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G S+YR
Sbjct: 185 AMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYR 244
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E P++L S+ FD+EGV+T++R ++K+GI+ + L++
Sbjct: 245 KSTFLLDSLGKQILPDWLTIEEHPYLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTS 304
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGD
Sbjct: 305 YSARKLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGLGVSAITGD 360
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M I
Sbjct: 361 YSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 420
Query: 457 AGK 459
AG+
Sbjct: 421 AGQ 423
>gi|334702873|ref|ZP_08518739.1| protein PmbA [Aeromonas caviae Ae398]
Length = 447
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 178/443 (40%), Positives = 264/443 (59%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
S + + + L AK +GA + + ++ G SV R +++ IE N D + + +Y +D
Sbjct: 12 SHLEAVVAEALEIAKGLGAGLAEVSISKQTGLSVNTRGCELESIEFNKDGALGIAVY-RD 70
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
G K G+SST+D K ++ + AA IAR T+ D+ AGL D + L + D +L
Sbjct: 71 GCK---GSSSTTDLTKPAIRAAVEAAMEIARHTSPDDCAGLADADLLAWDAPDLQLCHQI 127
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L +A CE A ++ I +++ ++ + NSHGF+ GY S++ +S
Sbjct: 128 ELDPQRGIALAIECERLALGRDARIKHSDGASFSSHLGVKVYGNSHGFVKGYAASRNSLS 187
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD YSS+ L P+ I A +RT+SRL A+KISTR PVLF
Sbjct: 188 CVLIGEQDGDMQRDYGYSSSRSLDGLWSPQRIADEAVERTVSRLGARKISTRHAPVLFHP 247
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
A L ISG +LYRKS+FL+D LGK+I + I E PH+ G S+ FD EG
Sbjct: 248 DTAAGLWGHLVMAISGGNLYRKSSFLLDKLGKQILPEWLTIQEFPHLPGGLASTPFDGEG 307
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T+ +++NG + + L++YSA+KLG+ TTG++GG H+ + + + + + MLK+
Sbjct: 308 VRTRDMDIIRNGELMSWLLTSYSARKLGLTTTGHAGGIHNWQV----SNTGQDFQGMLKE 363
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGLLVTELMG G+N + GDYS+GA G+W+ENG+I Y VEEITI+G L +MF IVA+G
Sbjct: 364 MGTGLLVTELMGQGVNIVNGDYSRGAAGFWVENGEILYPVEEITIAGNLADMFSHIVAVG 423
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
SD R+S +GS+L+E M +AG
Sbjct: 424 SDEDERSSLKTGSVLVEQMKLAG 446
>gi|398840680|ref|ZP_10597913.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM102]
gi|398109885|gb|EJL99797.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM102]
Length = 448
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 177/441 (40%), Positives = 269/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ AK+ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEAKRQGASACEVAVSLEQGLSTTVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
++S S+ ++ +T+ AA IA+ T+ D +GL D + + DF L+ W +
Sbjct: 75 GSASTSASGSE----AIRETVAAALAIAKHTSEDEASGLADAALMAKDLQDFDLFHQWNI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF +S I N + T ++T Q + NSHGF+ GY ++H +S
Sbjct: 131 NPEQAIEQALACEAAAFAADSRIKNADGTTLSTHQGCRVYGNSHGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N L PE IG AA+R SRL A+ + T + PVLF A L
Sbjct: 191 MIAEADGQMQRDYWYDVNRQGNLLASPESIGQRAAQRAASRLGARPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG SLYRKS+FL +LG+K+F + I E PH++ + GSS+FD +G+
Sbjct: 251 AGGLFGSFLSAISGGSLYRKSSFLEGTLGQKLFPEWLTIDERPHLMRALGSSAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TYS +KLGM +T N+GG H+L + T ++ +L++M
Sbjct: 311 TYAKPFVEKGELVSYILGTYSGRKLGMPSTANAGGVHNLFV----THGDEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ++V+E+TI+G +++MFKQI+A+G+D
Sbjct: 367 RGLLVTELMGQGLNMVTGDYSRGAAGYWVENGEIQFAVQEVTIAGNMRDMFKQIIAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|113461470|ref|YP_719539.1| antibiotic maturation factor [Haemophilus somnus 129PT]
gi|112823513|gb|ABI25602.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Haemophilus somnus 129PT]
Length = 450
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 175/444 (39%), Positives = 282/444 (63%), Gaps = 13/444 (2%)
Query: 19 QQLAQDMLNYA----KKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+Q+ QD ++YA + GA+ + + + NG SV R +I+ +E NND + + +Y+
Sbjct: 15 EQMLQDAVSYAIETATQAGAT-AEVAVTKVNGLSVSTRLQEIENVEFNNDGALGISVYLG 73
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
+ K GN+STSD ++ +++A IA++T+ D+ AGL D+ + + D LY
Sbjct: 74 NQK----GNASTSDLSHTAIKSAVDSALAIAKYTSPDDCAGLADKELMAFDAPDLALYHE 129
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+ +D A +A + E A +++ IVN+E + + NSHG + Y S++ +
Sbjct: 130 SDIDVDHAVSLALQTEKAALDYDERIVNSEGATFNSHTGVRVYGNSHGMLQSYLSSRYSL 189
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S IA K+++RD Y+ + ++L+ +G +AK+ +S L+ +KI T++ PV+F
Sbjct: 190 SCSVIASSNKQLERDYEYTVARNIQELESAVWVGENSAKKALSHLQPRKIPTQEAPVIFM 249
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L+ A ISG SLYR S+FL+D LGKKI I E PH++G S+ FD+E
Sbjct: 250 NSVATGLIGHLATAISGGSLYRNSSFLLDHLGKKILPDWFHISERPHLIGKLASTPFDSE 309
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+T+ +++ GI+Q Y L++YS +KLGM++TG++GG H+ ++ N S NL +L+
Sbjct: 310 GVRTKNLEIIEQGILQTYLLTSYSGRKLGMQSTGHAGGIHNWLVKPN----SQNLTALLQ 365
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGLLVT+LMG G+N ITGDYS+GAFG+W+ENG+IQY V EITI+G+L++MF I+A+
Sbjct: 366 EMGTGLLVTDLMGQGVNIITGDYSRGAFGFWVENGEIQYPVSEITIAGQLKDMFANIIAV 425
Query: 435 GSDVLTRNSNTSGSILIENMIIAG 458
G+D+ R++ +GSIL+E M I+G
Sbjct: 426 GNDIEYRSNIQTGSILLEKMKISG 449
>gi|170718418|ref|YP_001783639.1| peptidase U62 modulator of DNA gyrase [Haemophilus somnus 2336]
gi|168826547|gb|ACA31918.1| peptidase U62 modulator of DNA gyrase [Haemophilus somnus 2336]
Length = 450
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 173/443 (39%), Positives = 281/443 (63%), Gaps = 11/443 (2%)
Query: 19 QQLAQDMLNYAKKIG---ASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+Q+ QD ++YA K + + + + NG SV R +I+ +E NND + + +Y+ +
Sbjct: 15 EQMLQDAVSYAIKTATQAGATAEVAVTKVNGLSVSTRLQEIENVEFNNDGALGISVYLGN 74
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
K GN+STSD ++ +++A IA++T+ D+ AGL D+ + + D LY +
Sbjct: 75 QK----GNASTSDLSHTAIKSAVDSALAIAKYTSPDDCAGLADKELMAFDAPDLALYHEF 130
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
+ +D A +A + E A +++ IVN+E + + NSHG + Y S++ +S
Sbjct: 131 DIDVDHAVSLALQTEKAALDYDKRIVNSEGATFNSHTGVRVYGNSHGMLQSYLSSRYSLS 190
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
S IA ++++RD Y+ + ++L+ +G +AK+ +S L+ +KI T++ PV+F
Sbjct: 191 CSVIASSNEQLERDYEYTVARNIQELESAVWVGENSAKKALSHLQPRKIPTQEVPVIFMN 250
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L+ A ISG SLYR S+FL+D LGKKI I E PH++G S+ FD+EG
Sbjct: 251 SVATGLIGHLATAISGGSLYRDSSFLLDHLGKKILPDWFHISERPHLIGKLASTPFDSEG 310
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T+ +++ GI+Q Y L++YS +KLGM++TG++GG H+ ++ N S NL +L++
Sbjct: 311 VRTKNLEIIEQGILQTYLLTSYSGRKLGMQSTGHAGGIHNWLVKPN----SQNLTALLQE 366
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGLLVT+LMG G+N ITGDYS+GAFG+W+ENG+IQY V EITI+G+L++MF I+A+G
Sbjct: 367 MGTGLLVTDLMGQGVNIITGDYSRGAFGFWVENGEIQYPVSEITIAGQLKDMFANIIAVG 426
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
+D+ R++ +GSIL+E M I+G
Sbjct: 427 NDIEYRSNIQTGSILLEKMKISG 449
>gi|425062801|ref|ZP_18465926.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Pasteurella multocida subsp. gallicida X73]
gi|404383507|gb|EJZ79958.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Pasteurella multocida subsp. gallicida X73]
Length = 451
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 168/433 (38%), Positives = 278/433 (64%), Gaps = 8/433 (1%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
++ A+K GA+ + + + +G SV R +I+ +E ND + + +Y+ + K GN+S
Sbjct: 26 VDMAQKAGAT-AEVAVTKVSGLSVSTRLQEIENVEFTNDGALGISVYLGNQK----GNAS 80
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ +T+ AA +IA++T+ D AGL D + + + D LY + ++ A +
Sbjct: 81 TSDLSPEAIKNTVEAAISIAKYTSPDECAGLADYDLMAFDAPDLALYHAADIDVEKATAL 140
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE 205
A E A +++ IVN+E + + N+HG + Y S++ +S S IA ++
Sbjct: 141 ALETEQAALSYDKRIVNSEGAAFNSHTGVRVYGNTHGMLQSYLSSRYSLSCSVIAGVEEQ 200
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
++RD Y+ + D +L+ +G + AK+T+SRL+ +K++T++ PV+F +A L++
Sbjct: 201 LERDYEYTISRDLNQLESASWVGEHCAKKTLSRLQPQKMATQQVPVIFLNDVATGLISHL 260
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
ISG SLYRKS+FL+D LGK++ I E PH++G SS FD+EGV+TQ R ++K
Sbjct: 261 TAAISGGSLYRKSSFLLDHLGKQVLPDWFHISEQPHLIGQLASSPFDSEGVRTQCREIIK 320
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
G +Q Y L++YS KKLGM++TG++GG H+ ++ N T L +L++M TGLLVT+L
Sbjct: 321 QGTLQTYLLTSYSGKKLGMRSTGHAGGIHNWLVKPNTT---GGLTTLLRQMGTGLLVTDL 377
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+L+ M + IVA+G D+ R++
Sbjct: 378 MGQGVNLVTGDYSRGAAGFWVENGEIQYPVAEITIAGQLKEMLRNIVAVGDDIEHRSNIQ 437
Query: 446 SGSILIENMIIAG 458
+GSIL+E++ ++G
Sbjct: 438 TGSILLEHLKVSG 450
>gi|109896524|ref|YP_659779.1| C69 family peptidase [Pseudoalteromonas atlantica T6c]
gi|109698805|gb|ABG38725.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Pseudoalteromonas atlantica T6c]
Length = 441
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 177/443 (39%), Positives = 265/443 (59%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
++ QQ+ +D+L AK+ GA+ + ++ G +V R +++ +E ND + + +Y
Sbjct: 6 TDIQQIVEDVLKLAKEKGATQAEASMSKVRGIAVSSRLKEVETVEFTNDGGLGITVY--- 62
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
K G++ST+D ++L T+ A IA++T D +GL D+ + P D L+ P
Sbjct: 63 -KGQRKGSASTADLSPQALRLTVEKAIEIAKYTGEDACSGLADKELMAFEPQDLDLFHPI 121
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L D A + E A F+ I N++ + NSHG GY S++ +S
Sbjct: 122 ELDTDFAIEQVIKAETAALAFDPRITNSDGASYNANLGTKVYGNSHGLNVGYNSSRYSMS 181
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD Y+ + PE IG +A+ T+ RL A++I T K PVLF+
Sbjct: 182 CVVIGEQDGDMQRDYSYTVERQANLMASPEQIGKESAEFTLGRLGARQIKTAKVPVLFDK 241
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L+ F ISG +LYRKS+FLVD LG+++ S I E P I+ SS+FD+EG
Sbjct: 242 EIASGLIGHFISAISGGNLYRKSSFLVDKLGEQVLPSWFSISERPFIMRGLASSAFDHEG 301
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T+ +V +GI+ Y L++YSA+K+ M+TTG++GG H+ +I T SD K+ML +
Sbjct: 302 VRTKDSEIVTDGILNQYLLTSYSARKMKMQTTGHAGGIHNWLI--KPTGQSD--KQMLAE 357
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
+ TGLLVTELMG G+N +TGDYS+GA G+W+ENG IQY V EITI+G L +M K IVA+G
Sbjct: 358 LGTGLLVTELMGQGVNVVTGDYSRGAAGFWVENGVIQYPVHEITIAGNLADMLKNIVAVG 417
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
S++ R S +GSILI+NM +AG
Sbjct: 418 SEIERRGSIQTGSILIDNMQVAG 440
>gi|389807424|ref|ZP_10204094.1| putative Zn-dependent protease-like protein [Rhodanobacter
thiooxydans LCS2]
gi|388444047|gb|EIM00168.1| putative Zn-dependent protease-like protein [Rhodanobacter
thiooxydans LCS2]
Length = 455
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 172/461 (37%), Positives = 268/461 (58%), Gaps = 8/461 (1%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIE 60
M ++ ++ + ++ +LA+D++ A+ GAS + + + G SV VR G+++ +E
Sbjct: 1 MSEVAISQDRSLHELDRLAELAEDVIRRARAAGASQAEVAASIDTGLSVNVRLGEVETVE 60
Query: 61 QNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDEN 120
D+ + +Y K G++ST+D S+ T+ A IAR+T D AGL D
Sbjct: 61 HTRDRGFGLTVYFGQRK----GSASTADLNPDSIQATLEQACAIARYTEEDPAAGLADAA 116
Query: 121 TLEMNPLDFKLYTPWFLSIDDAKLIAYRCENE-AFNFNSLIVNNENTGVTTQQSHFLLAN 179
+ D L+ PW ID A+ I E A ++ I N++ V + + AN
Sbjct: 117 RMATAFPDLDLWHPW--DIDTAQAIELGIAIEDAGRVHAGISNSDGASVQAGEGLSVYAN 174
Query: 180 SHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRL 239
SHGF+ ++H +S++ IA MQRD WY S + +G AA+RT++RL
Sbjct: 175 SHGFVGRERGTRHALSLALIAGDEDGMQRDYWYDSVRAAGDFISAQALGNKAAERTLARL 234
Query: 240 KAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIED 299
A+ +STR+CPVLF LA L+ +SG +LYR+++FL+D GK I + + I E
Sbjct: 235 GARGLSTRQCPVLFAPELARGLVGHLLGAVSGGALYRRASFLLDHAGKSIMPAWLNIDER 294
Query: 300 PHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIII 359
PH+ GS +FD EGV T +V+ G++ Y L +YSA+KLG+++TGN+GG H+LI+
Sbjct: 295 PHLPRGQGSGNFDAEGVATVDSALVEGGVLARYVLGSYSARKLGLESTGNAGGVHNLIVE 354
Query: 360 SNKTKSS-DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEI 418
+ ML+++ TGLLVTE+MG G++ +TGDYS+GA G+W+ENG+I Y VE I
Sbjct: 355 PGAADGERSDFAGMLRRLGTGLLVTEVMGQGVSVVTGDYSRGAAGFWVENGRIAYPVEGI 414
Query: 419 TISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
TI+ L+ MF IVA+G+DV R+ +GSIL++ M +AG+
Sbjct: 415 TIAANLREMFAGIVAVGTDVDPRSHVLTGSILLDRMTVAGE 455
>gi|268590753|ref|ZP_06124974.1| PmbA protein [Providencia rettgeri DSM 1131]
gi|291313527|gb|EFE53980.1| PmbA protein [Providencia rettgeri DSM 1131]
Length = 446
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 176/458 (38%), Positives = 274/458 (59%), Gaps = 16/458 (3%)
Query: 2 EQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQ 61
EQ+ + R K + + + A+ + A+ + N+ G SV R+G+++ +E
Sbjct: 5 EQVTEQRKKLEEAVAHALEFAKTRCDAAE--------VAVNKSTGISVSTRQGEVENVEF 56
Query: 62 NNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENT 121
N+D + + +Y Q K G++S++D +++ T+ AA +IA +T+ D AG D++
Sbjct: 57 NSDGALGITVYYQQRK----GSASSTDLSPEAIERTVQAAIDIANYTSEDPCAGPADKSL 112
Query: 122 LEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSH 181
L D L+ LS ++A +A E A N +S IVN E + NSH
Sbjct: 113 LAFEAPDLNLFQASELSPEEAIRLASIAEMSALNADSRIVNTEGGSFNGHYGVRVFGNSH 172
Query: 182 GFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKA 241
G + Y S++ +S IA + EM+RD Y+ L PE +G A+RT+SRL
Sbjct: 173 GMLQSYCSSRYSMSSCVIAEQNGEMERDYAYTIGRSLGALQSPEWVGQECARRTLSRLSP 232
Query: 242 KKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPH 301
+K+ T K PV+F A +A L ISG+S+YRKS+FL+DSLGK+I S + I E PH
Sbjct: 233 RKLPTMKAPVIFAAEVATGLFGHLVGAISGSSIYRKSSFLLDSLGKQILPSWLTINEQPH 292
Query: 302 ILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISN 361
++G SS FD+EGV+T +R +V+NG++Q + +++YSA+KLG+++TG++GG H+ I
Sbjct: 293 LMGGLASSPFDSEGVRTCERNIVENGVLQTWLMTSYSARKLGLQSTGHAGGIHNWRIAGQ 352
Query: 362 KTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITIS 421
+ + +LK+M TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+
Sbjct: 353 GL----SFEALLKQMGTGLVVTELMGQGVSGITGDYSRGASGFWVENGEIQYPVSEITIA 408
Query: 422 GKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
G L+ M+ +V I D+ TR++ GS+LI M IAG+
Sbjct: 409 GNLKEMWANMVTIADDIETRSNIQCGSVLIPEMSIAGE 446
>gi|333929317|ref|YP_004502896.1| peptidase U62 modulator of DNA gyrase [Serratia sp. AS12]
gi|333934270|ref|YP_004507848.1| peptidase U62 [Serratia plymuthica AS9]
gi|386331140|ref|YP_006027310.1| peptidase U62 modulator of DNA gyrase [Serratia sp. AS13]
gi|333475877|gb|AEF47587.1| peptidase U62 modulator of DNA gyrase [Serratia plymuthica AS9]
gi|333493377|gb|AEF52539.1| peptidase U62 modulator of DNA gyrase [Serratia sp. AS12]
gi|333963473|gb|AEG30246.1| peptidase U62 modulator of DNA gyrase [Serratia sp. AS13]
Length = 446
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 172/455 (37%), Positives = 270/455 (59%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K ++ + +Q L A+ G+ + + + G SV R G+++ +E N+D
Sbjct: 1 MKVVTQVAEQRKALEQAVSQALELARA-GSDAAEVAVTKSTGISVSTRFGEVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q K G++S++D ++ T+ AA +IAR+T++D AG +++ L
Sbjct: 60 GALGITVYHQQRK----GSASSTDLSPDAIARTVQAALDIARYTSADPNAGPAEKDLLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
D L+ P L + +A R E + + I N E + + NSHG +
Sbjct: 116 EAPDLDLFHPAELDAERGIELAARAEQASLAADKRITNTEGGSFNSHYGIKVFGNSHGML 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S+H +S IA +M+RD Y+ L PE +G A+RT+SRL +K+
Sbjct: 176 QSYCSSRHSLSSCVIAEHNGDMERDYAYTIGRAMGDLASPEWVGEECARRTLSRLAPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
ST PVLF + +A L ISG+S+YRKSTFL+DSLGK+I + I E PH+L
Sbjct: 236 STMTAPVLFASEVATGLFGHLVGAISGSSVYRKSTFLLDSLGKQILPDWLTIEEHPHLLK 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+TQ+R +VK+G++Q + L++Y+A+KLGM +TG++GG H+ I
Sbjct: 296 GLASTPFDSEGVRTQRRDIVKDGVLQTWLLTSYAARKLGMHSTGHAGGIHNWRIAGQ--- 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ MLK++ TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L
Sbjct: 353 -GHDFAGMLKQLGTGLVVTELMGQGVSGITGDYSRGAAGFWVENGEIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M + IV++GSD+ TR++ GS+L+ +M IAG+
Sbjct: 412 KDMLRNIVSVGSDIETRSNIQCGSVLLPDMKIAGQ 446
>gi|71728990|gb|EAO31121.1| Peptidase U62, modulator of DNA gyrase [Xylella fastidiosa Ann-1]
Length = 455
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 168/441 (38%), Positives = 261/441 (59%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+AQ +L A GA+ + + +E G V VR G ++ +E D+++ V +Y K
Sbjct: 21 LADIAQRLLERAHACGATQAEVGCSEERGLDVNVRMGDVETVESTCDRSIGVTLYFGQRK 80
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST+D + SL T+ A IAR+T D GL D + D + PW L
Sbjct: 81 ----GSASTADLQEASLEATVAQACAIARYTEDDPANGLADPVRMATVFPDLDCWHPWTL 136
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
A +A CE ++ IVN++ V+T+ + + ANSHGF+ ++H +S +
Sbjct: 137 EAGTAVDLALGCEAAGRAADARIVNSDGASVSTRFALSVYANSHGFVGRERMTQHSMSCA 196
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA G MQRD WY++ + L+ P +G AA+RT++RL+ + ++T + PVLF +
Sbjct: 197 LIAADGDGMQRDGWYTNALAREDLELPVAVGRKAAERTVARLQPRSLATTQLPVLFVPEV 256
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G ++F I E PH+ S++FD EGV
Sbjct: 257 ARSLIGHLLNAVSGGALYRRASFLLDSVGTRLFPEWFAINERPHLRRGLRSATFDAEGVA 316
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T +V G++Q Y LS+YSA+KLG+++T N+GG H+L +I+N L ++ ++
Sbjct: 317 TCDAPLVAGGVLQRYVLSSYSARKLGLQSTANAGGVHNLEVIANAA----GLDALVAGLS 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+WIENG I Y V+ +TI+G L+ MF I A+G+D
Sbjct: 373 RGLLVTELMGSGVNPVTGDYSRGAAGFWIENGAIAYPVDGLTIAGNLREMFSAIEAVGAD 432
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ + GS+LI M++AG
Sbjct: 433 VDRRSHVSMGSLLIGRMMVAG 453
>gi|410635954|ref|ZP_11346561.1| PmbA protein [Glaciecola lipolytica E3]
gi|410144631|dbj|GAC13766.1| PmbA protein [Glaciecola lipolytica E3]
Length = 443
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 178/443 (40%), Positives = 261/443 (58%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
++ QQ +D+L AK+ GASH+ ++ G SV R +++ +E ND + + +Y
Sbjct: 8 AQIQQAVEDVLALAKQKGASHAEASMSKVEGISVSTRLKEVETVEFTNDGGLGISVYFGQ 67
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
K G++ST+D +L + A IA++T+ D F+G DE+ + + + +Y P
Sbjct: 68 RK----GSASTADLSINALSLAVEKACEIAKYTSEDPFSGPADESLMAYDYPNLDMYHPI 123
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L A E A +F+ I N++ + NSHGF+ GYP S++ +S
Sbjct: 124 ELDTQHGIQQALIAEEAALDFDPRITNSDGASYNANIGMKVYGNSHGFIGGYPSSRYSLS 183
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I +MQRD Y+ N + IG AA+ T+SRL A+K+ T K PV+F
Sbjct: 184 CVVIGEDNGDMQRDYSYTVNRQADLMTSAAQIGKEAAEFTLSRLNARKLKTAKVPVIFHR 243
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A LL F +SG SL+RKS+FL+DSL ++ +I+E PHI SS FDNEG
Sbjct: 244 DVAAGLLGHFVSAVSGGSLFRKSSFLLDSLNTQVLPDWFEILERPHIASGLASSPFDNEG 303
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
VKT+ +V G++ Y L++YSA+K+GM+T G++GG H+ +I T SD + +LK+
Sbjct: 304 VKTEDMTIVSQGVLNHYLLTSYSARKMGMQTNGHAGGIHNWLI--KHTGHSD--QALLKE 359
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++M I AIG
Sbjct: 360 MGTGLLVTELMGQGVNIVTGDYSRGAAGFWVENGEIQYPVHEITIAGNLKDMLMNISAIG 419
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
S TR S +GSIL+ NM +AG
Sbjct: 420 SVAETRGSIHTGSILVSNMQLAG 442
>gi|270263269|ref|ZP_06191539.1| hypothetical protein SOD_d02860 [Serratia odorifera 4Rx13]
gi|421785750|ref|ZP_16222175.1| pmbA protease involved in Microcin B17 maturation and sensitivity
to the DNA gyrase inhibitor LetD [Serratia plymuthica
A30]
gi|270042957|gb|EFA16051.1| hypothetical protein SOD_d02860 [Serratia odorifera 4Rx13]
gi|407752365|gb|EKF62523.1| pmbA protease involved in Microcin B17 maturation and sensitivity
to the DNA gyrase inhibitor LetD [Serratia plymuthica
A30]
Length = 446
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 172/455 (37%), Positives = 270/455 (59%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K ++ + +Q L A+ G+ + + + G SV R G+++ +E N+D
Sbjct: 1 MKVVTQVAEQRKALEQAVSQALELARA-GSDAAEVAVTKSTGISVSTRFGEVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q K G++S++D ++ T+ AA +IAR+T++D AG +++ L
Sbjct: 60 GALGITVYHQQRK----GSASSTDLSPDAIARTVQAALDIARYTSADPNAGPAEKDLLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
D L+ P L + +A R E + + I N E + + NSHG +
Sbjct: 116 EAPDLDLFHPAELDAERGIELAARAEQASLAADKRITNTEGGSFNSHYGIKVFGNSHGML 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S+H +S IA +M+RD Y+ L PE +G A+RT+SRL +K+
Sbjct: 176 QSYCSSRHSLSSCVIAEHDGDMERDYAYTIGRAMGDLASPEWVGEECARRTLSRLAPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
ST PVLF + +A L ISG+S+YRKSTFL+DSLGK+I + I E PH+L
Sbjct: 236 STMTAPVLFASEVATGLFGHLVGAISGSSVYRKSTFLLDSLGKQILPDWLTIEEHPHLLK 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+TQ+R +VK+G++Q + L++Y+A+KLGM +TG++GG H+ I
Sbjct: 296 GLASTPFDSEGVRTQRRDIVKDGVLQTWLLTSYAARKLGMHSTGHAGGIHNWRIAGQ--- 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ MLK++ TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L
Sbjct: 353 -GHDFAGMLKQLGTGLVVTELMGQGVSGITGDYSRGAAGFWVENGEIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M + IV++GSD+ TR++ GS+L+ +M IAG+
Sbjct: 412 KDMLRNIVSVGSDIETRSNIQCGSVLLPDMKIAGQ 446
>gi|440232706|ref|YP_007346499.1| putative Zn-dependent protease-like protein [Serratia marcescens
FGI94]
gi|440054411|gb|AGB84314.1| putative Zn-dependent protease-like protein [Serratia marcescens
FGI94]
Length = 446
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 165/428 (38%), Positives = 261/428 (60%), Gaps = 8/428 (1%)
Query: 32 IGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCK 91
+G + + + G SV R G+++ +E N+D + + +Y Q K G++S++D
Sbjct: 27 VGCDAAEVAVTKTTGISVSTRFGEVENVEFNSDGALGITVYYQQRK----GSASSTDLSP 82
Query: 92 KSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCEN 151
++ T+ AA +IAR+T+ D AG +++ L D L+ P L + +A R E
Sbjct: 83 DAIARTVQAALDIARYTSPDPCAGPAEKDLLAFEAPDLDLFHPAELDAERGIELAARAEQ 142
Query: 152 EAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNW 211
+ ++ I N E + + NSHG + Y S+H +S IA +M+RD
Sbjct: 143 ASLGADARITNTEGGSFNSHYGIKVFGNSHGMLQSYCSSRHSLSSCVIAEHQGDMERDYA 202
Query: 212 YSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISG 271
Y+ D L PE +G A+RT+SRL +K++T K PVLF + +A L ISG
Sbjct: 203 YTIGRDLNDLASPEWVGQECARRTLSRLAPRKLATMKAPVLFASEVATGLFGHLVGAISG 262
Query: 272 NSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQG 331
+S+YRKSTFL+D+LG +I + I E PH+L S+ FD+EGV+TQ+R +VK+G++Q
Sbjct: 263 SSVYRKSTFLLDALGTQILPEWLTIEEHPHLLKGLASTPFDSEGVRTQRRDIVKDGVLQT 322
Query: 332 YFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGIN 391
+ L++Y+A+KLG+ +TG++GG H+ I ++ MLK++ TGL+VTELMG G++
Sbjct: 323 WLLTSYAARKLGLHSTGHAGGIHNWRIAGQ----GNDFAGMLKQLGTGLVVTELMGQGVS 378
Query: 392 YITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILI 451
+TGDYS+GA G+W+ENG+IQY V EITI+G L++M + IV++GSD+ TR++ GS+L+
Sbjct: 379 GVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMLRNIVSVGSDIETRSNIQCGSVLL 438
Query: 452 ENMIIAGK 459
M IAG+
Sbjct: 439 PEMKIAGQ 446
>gi|378774811|ref|YP_005177054.1| protein PmbA [Pasteurella multocida 36950]
gi|356597359|gb|AET16085.1| protein PmbA [Pasteurella multocida 36950]
Length = 451
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 168/433 (38%), Positives = 277/433 (63%), Gaps = 8/433 (1%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
++ A+K GA+ + + + +G SV R +I+ +E ND + + +Y+ + K GN+S
Sbjct: 26 VDMAQKAGAT-AEVAVTKVSGLSVSTRLQEIENVEFTNDGALGISVYLGNQK----GNAS 80
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ +T+ AA +IA++T+ D AGL D + + + D LY + ++ A +
Sbjct: 81 TSDLSPEAIKNTVEAAISIAKYTSPDECAGLADYDLMAFDAPDLALYHAADIDVEKATAL 140
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE 205
A E A N++ IVN+E + + N+HG + Y S++ +S S IA +
Sbjct: 141 ALETEQAALNYDKRIVNSEGAAFNSHTGVRVYGNTHGMLQSYLSSRYSLSCSVIAGVEDQ 200
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
++RD Y+ + D +L+ +G + AK+T+SRL+ +K++T++ PV+F +A L++
Sbjct: 201 LERDYEYTISRDLNQLESASWVGEHCAKKTLSRLQPQKMATQQVPVIFLNDVATGLISHL 260
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
ISG +LYRKS+FL+D LGK++ I E PH++G SS FD+EGV+TQ R ++K
Sbjct: 261 TAAISGGNLYRKSSFLLDHLGKQVLPDWFHISEQPHLIGQLASSPFDSEGVRTQCREIIK 320
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
G +Q Y L++YS KKLGM++TG++GG H+ ++ N T L +L++M TGLLVT+L
Sbjct: 321 QGTLQTYLLTSYSGKKLGMRSTGHAGGIHNWLVKPNTT---GGLTTLLRQMGTGLLVTDL 377
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+L+ M + IVA+G D+ R++
Sbjct: 378 MGQGVNLVTGDYSRGAAGFWVENGEIQYPVAEITIAGQLKEMLRNIVAVGDDIEHRSNIQ 437
Query: 446 SGSILIENMIIAG 458
+GSIL+E++ ++G
Sbjct: 438 TGSILLEHLKVSG 450
>gi|227326624|ref|ZP_03830648.1| peptidase PmbA [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 446
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 169/429 (39%), Positives = 257/429 (59%), Gaps = 8/429 (1%)
Query: 31 KIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFC 90
+ G+ + + ++ G SV R G+++ +E N+D + + +Y Q K G++S++D
Sbjct: 26 RAGSDAAEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQQRK----GSASSTDLS 81
Query: 91 KKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCE 150
++ T+ AA +IAR+T+ D FAG D + L + D L+ P L D +A R E
Sbjct: 82 PDAIARTVQAALDIARYTSVDPFAGPADRDLLAFDAPDLDLFHPTELDADRGIELAARAE 141
Query: 151 NEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDN 210
A + I N E + + NSHG + Y S+H +S IA +M+RD
Sbjct: 142 QAALQADKRITNTEGGSFNSHYGVKVFGNSHGLLKSYCSSRHSMSSCVIAEVNGDMERDY 201
Query: 211 WYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLIS 270
Y+ L PE +G A+RT+SRL +K+ T + PV+F A +A L IS
Sbjct: 202 AYTVGRALDDLLSPEWVGEECARRTLSRLSPRKLPTMQAPVMFSAEVATGLFGHLVGAIS 261
Query: 271 GNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQ 330
G S+YRKSTFL+D LG++I + I E PH+L S+ FD+EGV+TQ R +VK G++Q
Sbjct: 262 GGSVYRKSTFLLDKLGQQILPEWLTIEEQPHLLRGLASTPFDSEGVRTQAREIVKAGVLQ 321
Query: 331 GYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGI 390
+ +++YSA+KLGM++TG++GG H+ I + MLK+M GLLVTELMG G+
Sbjct: 322 TWLMTSYSARKLGMQSTGHAGGIHNWRIAGQGL----DFNGMLKQMGKGLLVTELMGQGV 377
Query: 391 NYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSIL 450
+ +TGDYS+GA G+W+ENG+IQY V EITI+G L++M + IV +G+DV TR++ GS+L
Sbjct: 378 SGVTGDYSRGASGFWVENGEIQYPVSEITIAGNLKDMLRNIVTVGNDVETRSNIQCGSVL 437
Query: 451 IENMIIAGK 459
+ +M IAG+
Sbjct: 438 LPSMKIAGE 446
>gi|170729681|ref|YP_001775114.1| PmbA protein [Xylella fastidiosa M12]
gi|167964474|gb|ACA11484.1| PmbA protein [Xylella fastidiosa M12]
Length = 455
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 168/441 (38%), Positives = 262/441 (59%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+AQ +L A GA+ + + +E G V VR G ++ +E D+++ V +Y K
Sbjct: 21 LADIAQRLLERAHACGATQAEVGCSEERGLDVNVRMGDVETVESTCDRSIGVTLYFGQRK 80
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST+D + SL T+ A IAR+T D GL D + D + PW L
Sbjct: 81 ----GSASTADLQEASLEATVAQACAIARYTEDDPANGLADPVRMATVFPDLDCWHPWTL 136
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
A +A CE ++ IVN++ V+T+ + + ANSHGF+ ++H +S +
Sbjct: 137 EAGTAVDLALGCEAAGRAADARIVNSDGASVSTRFALSVYANSHGFVGRERMTQHSMSCA 196
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD WY++ + L+ P +G AA+RT++RL+ + ++T + PVLF +
Sbjct: 197 LIAGQGDGMQRDGWYTNALAREDLELPVAVGRKAAERTVARLQPRSLATTQLPVLFVPEV 256
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G ++F I E PH+ S++FD EGV
Sbjct: 257 ARSLIGHLLNAVSGGALYRRASFLLDSVGTRLFPEWFAINERPHLRRGLRSATFDAEGVA 316
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T +V G++Q Y LS+YSA+KLG+++T N+GG H+L +I+N +L ++ +
Sbjct: 317 TCDAPLVAGGVLQRYVLSSYSARKLGLQSTANAGGVHNLEVIANAA----DLDALVAGLP 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+WIENG I Y V+ +TI+G L+ MF I A+G+D
Sbjct: 373 RGLLVTELMGSGVNPVTGDYSRGAAGFWIENGAIAYPVDGLTIAGNLREMFSAIEAVGAD 432
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ + GS+LI M++AG
Sbjct: 433 VDRRSHVSMGSLLIGRMMVAG 453
>gi|429212944|ref|ZP_19204109.1| PmbA protein [Pseudomonas sp. M1]
gi|428157426|gb|EKX03974.1| PmbA protein [Pseudomonas sp. M1]
Length = 449
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 171/441 (38%), Positives = 265/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++ + ++ AK+ GA+ + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 16 LREQVERIVAEAKRQGATGCEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 75
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS +++ +T+ AA IAR T+ D+ +GL D + + D LY W L
Sbjct: 76 ----GSASTSATGDEAIRETVAAALAIARHTSEDDCSGLADPALMARDLPDLDLYHAWSL 131
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ D A A CE AF+ + + + T + + NSHGF+ GY ++H +S
Sbjct: 132 TPDQAVERALACEAAAFDADPRVTKADGTTLNIHHGCRVYGNSHGFIGGYASTRHSLSCV 191
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY + LD PE IG AA+R SRL A+ + T + PVLF +
Sbjct: 192 MIAEGEGQMQRDYWYDVKRRGELLDSPESIGRRAAQRAASRLGARPVPTAEVPVLFAPEV 251
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG SLYRKS+FL LG+++F + + E P + G+ GS+SFDN+G+
Sbjct: 252 AVGLFGHFLGAISGGSLYRKSSFLEGCLGQRLFPEWLTLDERPLLPGALGSASFDNDGLA 311
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y L TYS +KLGM +T N+GG H+L + + ++ K +L++M
Sbjct: 312 TYAKPFVENGTLVSYVLGTYSGRKLGMPSTANAGGVHNLFV----SHGDEDQKALLRRMG 367
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ+ V+E+TI+ L+++F I+AIG+D
Sbjct: 368 RGLLVTELMGQGVNLVTGDYSRGAGGYWVENGEIQFPVQEVTIAANLKDLFASILAIGND 427
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V +R + +GS+L+E M++AG
Sbjct: 428 VESRGNLHTGSVLVERMMVAG 448
>gi|253686672|ref|YP_003015862.1| peptidase U62 modulator of DNA gyrase [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251753250|gb|ACT11326.1| peptidase U62 modulator of DNA gyrase [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 446
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 169/429 (39%), Positives = 255/429 (59%), Gaps = 8/429 (1%)
Query: 31 KIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFC 90
+ G+ + + + G SV R G ++ +E N+D + + +Y Q K G++S++D
Sbjct: 26 RAGSDAAEVAVTKTTGISVSTRYGDVENVEFNSDGALGITVYHQQRK----GSASSTDLS 81
Query: 91 KKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCE 150
++ T+ AA +IAR+T+ D FAG D + L + D L+ P L D +A R E
Sbjct: 82 PDAIARTVQAALDIARYTSVDPFAGPADRDLLAFDAPDLDLFHPTELDADRGIELAARAE 141
Query: 151 NEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDN 210
A + I N E + + NSHG + Y S+H +S IA +M+RD
Sbjct: 142 QAALQADKRITNTEGGSFNSHYGVKVFGNSHGLLKSYCSSRHSMSSCVIAEVNGDMERDY 201
Query: 211 WYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLIS 270
Y+ L PE +G A+RT+SRL +K+ T + PV+F A +A L IS
Sbjct: 202 AYTVGRALDDLLSPEWVGEECARRTLSRLSPRKLPTMQAPVMFSAEVATGLFGHLVGAIS 261
Query: 271 GNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQ 330
G S+YRKSTFL+D LG++I + I E PH+L S+ FD+EGV+TQ R +VK G++Q
Sbjct: 262 GGSVYRKSTFLLDKLGQQILPEWLTIEEQPHLLKGLASTPFDSEGVRTQAREIVKAGVLQ 321
Query: 331 GYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGI 390
+ +++YSA+KLGMK+TG++GG H+ I + MLK+M GLLVTELMG G+
Sbjct: 322 TWLMTSYSARKLGMKSTGHAGGIHNWRIAGQGL----DFNGMLKQMGKGLLVTELMGQGV 377
Query: 391 NYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSIL 450
+ +TGDYS+GA G+W+ENG+IQY V EITI+G L++M + IV +G+D+ TR++ GS+L
Sbjct: 378 SGVTGDYSRGASGFWVENGEIQYPVSEITIAGNLKDMLRNIVTVGNDIETRSNIQCGSVL 437
Query: 451 IENMIIAGK 459
+ +M IAG+
Sbjct: 438 LPDMKIAGE 446
>gi|71276036|ref|ZP_00652317.1| Peptidase U62, modulator of DNA gyrase [Xylella fastidiosa Dixon]
gi|71163119|gb|EAO12840.1| Peptidase U62, modulator of DNA gyrase [Xylella fastidiosa Dixon]
gi|71730770|gb|EAO32843.1| Peptidase U62, modulator of DNA gyrase [Xylella fastidiosa subsp.
sandyi Ann-1]
Length = 455
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 168/441 (38%), Positives = 262/441 (59%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+AQ +L A GA+ + + +E G V VR G ++ +E D+++ V +Y K
Sbjct: 21 LADIAQRLLERAHACGATQAEVGCSEERGLDVNVRMGDVETVESTCDRSIGVTLYFGQRK 80
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST+D + SL T+ A IAR+T D GL D + D + PW L
Sbjct: 81 ----GSASTADLQEASLEATVAQACAIARYTEDDPANGLADPVRMATVFPDLDCWHPWTL 136
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
A +A CE ++ IVN++ V+T+ + + ANSHGF+ ++H +S +
Sbjct: 137 EAGTAVDLALGCEAAGRAADARIVNSDGASVSTRFALSVYANSHGFVGRERMTQHSMSCA 196
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD WY++ + L+ P +G AA+RT++RL+ + ++T + PVLF +
Sbjct: 197 LIAGQGDGMQRDGWYTNALAREDLELPVAVGRKAAERTVARLQPRSLATTQLPVLFVPEV 256
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G ++F I E PH+ S++FD EGV
Sbjct: 257 ARSLIGHLLNAVSGGALYRRASFLLDSVGTRLFPEWFAINERPHLRRGLRSATFDAEGVA 316
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T +V G++Q Y LS+YSA+KLG+++T N+GG H+L +I+N +L ++ +
Sbjct: 317 TCDAPLVAGGVLQRYVLSSYSARKLGLQSTANAGGVHNLEVIANAV----DLDALVAGLP 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+WIENG I Y V+ +TI+G L+ MF I A+G+D
Sbjct: 373 RGLLVTELMGSGVNPVTGDYSRGAAGFWIENGAIAYPVDGLTIAGNLREMFSAIEAVGAD 432
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ + GS+LI M++AG
Sbjct: 433 VDRRSHVSMGSLLIGRMMVAG 453
>gi|453063505|gb|EMF04484.1| peptidase PmbA [Serratia marcescens VGH107]
Length = 446
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 168/455 (36%), Positives = 271/455 (59%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K ++ + +Q L A+ G+ + + + G SV R G+++ +E N+D
Sbjct: 1 MKVVTQVAEQRKALEQAVSQALELARA-GSDAAEVAVTKSTGISVSTRFGEVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y + K G++S++D ++ T+ AA +IAR+T+ D AG +++ L
Sbjct: 60 GALGITVYHRQRK----GSASSTDLSPDAIARTVQAALDIARYTSEDPCAGPAEKDLLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
D L+ P L + +A R E + + I N E + + NSHG +
Sbjct: 116 EAPDLDLFHPTELDAERGIELAARAEQASLAADKRITNTEGGSFNSHYGIKVFGNSHGML 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S+H +S IA + +M+RD Y+ L PE +G A+RT++RL +K+
Sbjct: 176 QSYCSSRHSLSSCVIAEQDGDMERDYAYTIGRAMGDLHSPEWVGQECARRTLARLAPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
ST K PVLF + +A L ISG+S+YRKSTFL+DSLGK+I + + + E PH+L
Sbjct: 236 STMKAPVLFASEVATGLFGHLVGAISGSSVYRKSTFLLDSLGKQILPAWLTVEEHPHLLK 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+TQ+R +VK+G++Q + +++YSA+KLG+ +TG++GG H+ I
Sbjct: 296 GLASTPFDSEGVRTQRRDIVKDGVLQTWLMTSYSARKLGLHSTGHAGGIHNWRIAGQGA- 354
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ MLK++ TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L
Sbjct: 355 ---DFAGMLKQLGTGLVVTELMGQGVSGVTGDYSRGAAGFWVENGEIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M + IV++GSD+ TR++ GS+L+ M IAG+
Sbjct: 412 KDMLRNIVSVGSDIETRSNIQCGSVLLPEMKIAGQ 446
>gi|423118349|ref|ZP_17106033.1| protein pmbA [Klebsiella oxytoca 10-5246]
gi|376401886|gb|EHT14488.1| protein pmbA [Klebsiella oxytoca 10-5246]
Length = 450
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 169/453 (37%), Positives = 277/453 (61%), Gaps = 11/453 (2%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHS---SIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
K I ++ ++ ++ + A ++ A S + ++ G SV R G+++ +E N+D
Sbjct: 6 KVISQVAQQRKTLEEAVTTALELAAGKSDGAEVSVSKTTGISVSTRYGEVENVEFNSDGA 65
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +Y Q+ K G++S++D +++ T+ AA +IAR+T+ D FAG+ D+ L +
Sbjct: 66 LGITVYHQNRK----GSASSTDLSPQAIARTVQAALDIARYTSPDPFAGVADKELLAFDA 121
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D L+ P ++ D A +A R E A + I N E + + NSHG +
Sbjct: 122 PDLDLFHPAEVTPDQAIELAARAEQVALQADKRITNTEGGSFNSHYGIKVFGNSHGMLQS 181
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
Y ++H +S IA + +M+RD Y+ + L PE +G A+RT+SRL +K+ST
Sbjct: 182 YCSTRHSLSSCVIAEENGDMERDYAYTIGRALEDLHTPEWVGDECARRTLSRLAPRKLST 241
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
K PV+F +A L I+G ++YRKSTFL+DSLG++I + I E PH+L
Sbjct: 242 MKAPVIFANEVATGLFGHLVGAIAGGAVYRKSTFLLDSLGQQILPEWLTIEEHPHLLKGL 301
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
S+ FD+EGV+T++R ++K+G++ + L+ YSA+KLGMK+TG++GG H+ I
Sbjct: 302 ASTPFDSEGVRTERRDIIKDGVLTQWLLTNYSARKLGMKSTGHAGGIHNWRINGRGL--- 358
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+ +++LK+M TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L++
Sbjct: 359 -SFEKLLKEMGTGLVVTELMGQGVSGVTGDYSRGASGFWVENGEIQYPVSEITIAGNLKD 417
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ IV +G D+ TR++ GS+L+ M IAG+
Sbjct: 418 MWRNIVTVGDDIETRSNIQCGSVLLPEMKIAGQ 450
>gi|300724989|ref|YP_003714314.1| protein pmbA [Xenorhabdus nematophila ATCC 19061]
gi|297631531|emb|CBJ92238.1| protein pmbA [Xenorhabdus nematophila ATCC 19061]
Length = 447
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 173/447 (38%), Positives = 268/447 (59%), Gaps = 11/447 (2%)
Query: 16 SEFQQLAQDMLNYA---KKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIY 72
+E ++ +D + +A K G + + N+ G SV R +++ +E N+D + + +Y
Sbjct: 9 AEQRKQLEDAVAHALELAKAGCDAAEVSVNKTTGISVSTRFSEVENVEFNSDGALGITVY 68
Query: 73 IQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLY 132
Q K G++S++D +++ T+ AA +IAR+T+ D +AG D+ L N + L+
Sbjct: 69 HQQRK----GSASSTDLSPEAIARTVQAAIDIARYTSPDPYAGPADKALLAFNAPELDLF 124
Query: 133 TPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKH 192
P L D A +A R E + + I N E + S + NSHG + Y S+H
Sbjct: 125 HPADLDADTAIELAARAEQASLQADERITNTEGGSFNSHYSIRVFGNSHGMLQNYCSSRH 184
Query: 193 IISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252
+S IA + M+RD Y+ + L PE +G A+RT+SRL A+K+ T K PV+
Sbjct: 185 SMSSCVIAEQDGNMERDYAYTVSRHFDDLKSPEWVGQECARRTLSRLGARKLPTMKAPVI 244
Query: 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFD 312
F A +A L ISG+S+YRKS+FL+DSLGK I S + I E PH+L S+ FD
Sbjct: 245 FSAEVATGLFGHLVGAISGSSIYRKSSFLLDSLGKPILPSWLTIAEQPHLLRGLASTPFD 304
Query: 313 NEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEM 372
+EGV+T R +VK G++Q + L++YSA+KLGM TG++GG H+ I + +
Sbjct: 305 SEGVRTTPRDIVKAGVLQTWLLTSYSARKLGMVNTGHAGGIHNWHIAGQGL----DFDGL 360
Query: 373 LKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIV 432
L++M TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L++M+ +V
Sbjct: 361 LREMGTGLIVTELMGQGVSAVTGDYSRGASGFWVENGEIQYPVSEITIAGNLKDMWANMV 420
Query: 433 AIGSDVLTRNSNTSGSILIENMIIAGK 459
+G+D+ TR++ GS+L+ M IAG+
Sbjct: 421 TMGNDIETRSNIQCGSVLLPEMSIAGQ 447
>gi|410619075|ref|ZP_11329991.1| PmbA protein [Glaciecola polaris LMG 21857]
gi|410161394|dbj|GAC34129.1| PmbA protein [Glaciecola polaris LMG 21857]
Length = 441
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 172/443 (38%), Positives = 269/443 (60%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
++ QQ+ +D+L AK+ GA+ + ++ G +V R +++ +E ND + + +Y
Sbjct: 6 TDIQQIVEDVLKLAKEKGATQAEASMSKVRGIAVSSRLKEVETVEFTNDGGLGITVY--- 62
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
K G++ST+D +L T+ A IA++T D +GL D++ + P D LY P
Sbjct: 63 -KGQRKGSASTADLSPAALRLTVEKAIEIAKYTGEDPCSGLADKDLMAFEPQDLDLYHPI 121
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L D A + E A F+ I N++ + NSHG GY S++ +S
Sbjct: 122 ELDTDFAIEQVIKAETAALAFDPRITNSDGASYNANLGTKVYGNSHGLNVGYNSSRYSMS 181
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD Y+ + + PE IG +A+ T+SRL A++I T K PVLF+
Sbjct: 182 CVVIGEQDGDMQRDYSYTVGRQAELMASPEQIGRESAEFTLSRLGARQIKTAKVPVLFDK 241
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L+ F ISG +L+RKS+FL+D LG+++ + +I E PHI+ SS FD+EG
Sbjct: 242 EIASGLIGHFISAISGGNLFRKSSFLLDKLGEQVLPNWFEISERPHIMRGLASSWFDHEG 301
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+TQ +V +GI+ Y L++YSA+K+ M++TG++GG H+ +I S + ++ML +
Sbjct: 302 VRTQDSEIVTDGILNQYLLTSYSARKMQMQSTGHAGGIHNWLI----KPSGQSDQQMLAE 357
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
+ TGLLVTELMG G+N +TGDYS+GA G+W+ENG IQ+ V EITI+G L +M K IVA+G
Sbjct: 358 LGTGLLVTELMGQGVNIVTGDYSRGAAGFWVENGVIQFPVHEITIAGNLADMLKNIVAVG 417
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
+++ +R S ++GSILI+NM +AG
Sbjct: 418 AELESRGSISTGSILIDNMQVAG 440
>gi|431928405|ref|YP_007241439.1| microcin-processing peptidase 1 [Pseudomonas stutzeri RCH2]
gi|431826692|gb|AGA87809.1| microcin-processing peptidase 1 [Pseudomonas stutzeri RCH2]
Length = 448
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 176/442 (39%), Positives = 271/442 (61%), Gaps = 8/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++ + ++ A++ GAS S + + G S VR+G+++ +E N D+ + +Y+ K
Sbjct: 15 LREKVERIIEEARRQGASASEVSVSMEQGLSTTVRQGEVETVEFNRDQGFGITLYVGQSK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST+ +++ +T+ AA IAR + D FAGL D + D LY PW +
Sbjct: 75 ----GSASTTGSGDEAIRETVAAALAIARHASEDEFAGLADAALMARELPDLDLYHPWNI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF + I N + T + T Q NS+GF+ GY S+H +S
Sbjct: 131 TPEQAIEQALSCEGAAFAVDQRIRNADGTSLNTHQGCRAYGNSNGFIGGYCSSRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD +Y N + L P+ IG AA+R + RL A+ + T + PVLF L
Sbjct: 191 MIAESEGQMQRDYFYDVNRIGEALLDPQTIGRRAAERAVRRLGARPVPTCEVPVLFAPEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRK+++L D+LG+ +F + + E PHI + GS+S+D +G+
Sbjct: 251 ATGLFGHFIAAISGGNLYRKASYLEDALGQTLFPEWLSLDERPHIPRALGSASYDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y LSTYS +KLGM +T N+GG H+L + + ++ ++++M
Sbjct: 311 TYAKPFVENGRLLSYVLSTYSGRKLGMPSTANAGGVHNLFV----SHGDEDQAALIRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ+ V+E+TI+G L++MF+QIVA+G D
Sbjct: 367 RGLLVTELMGQGLNLVTGDYSRGAGGYWVENGEIQFPVQEVTIAGNLRDMFRQIVAVGCD 426
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
V TR++ +GS+LIE M++AGK
Sbjct: 427 VETRSNVRTGSVLIERMMVAGK 448
>gi|421262833|ref|ZP_15713918.1| hypothetical protein KCU_00654 [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|401690246|gb|EJS85527.1| hypothetical protein KCU_00654 [Pasteurella multocida subsp.
multocida str. P52VAC]
Length = 451
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/433 (38%), Positives = 278/433 (64%), Gaps = 8/433 (1%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
++ A+K GA+ + + + +G SV R +I+ +E ND + + +Y+ + K GN+S
Sbjct: 26 VDMAQKAGAT-AEVAVTKVSGLSVSTRLQEIENVEFTNDGALGISVYLGNQK----GNAS 80
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ +T+ AA +IA++T+ D AGL D + + + D LY + ++ A +
Sbjct: 81 TSDLSPEAIKNTVEAAISIAKYTSPDECAGLADYDLMAFDAPDLALYHAADIDVEKATAL 140
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE 205
A E A +++ IVN+E + + N+HG + Y S++ +S S IA +
Sbjct: 141 ALETEQAALSYDKRIVNSEGAAFNSHTGVRVYGNTHGMLQSYLSSRYSLSCSVIAGVEDQ 200
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
++RD Y+ + D +L+ +G + AK+T+SRL+ +K++T++ PV+F +A L++
Sbjct: 201 LERDYEYTISRDLNQLESANWVGEHCAKKTLSRLQPQKMATQQVPVIFLNDVATGLISHL 260
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
ISG SLYRKS+FL+D LGK++ + I E PH++G SS FD+EGV+TQ R ++K
Sbjct: 261 TAAISGGSLYRKSSFLLDHLGKQVLPNWFHISEQPHLIGQLASSPFDSEGVRTQCREIIK 320
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
G +Q Y L++YS KKLGM++TG++GG H+ ++ N T L +L++M TGLLVT+L
Sbjct: 321 QGTLQTYLLTSYSGKKLGMRSTGHAGGIHNWLVKPNTT---GGLTTLLRQMGTGLLVTDL 377
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+L+ M + IVA+G D+ R++
Sbjct: 378 MGQGVNLVTGDYSRGAAGFWVENGEIQYPVAEITIAGQLKEMLRNIVAVGDDIEHRSNIQ 437
Query: 446 SGSILIENMIIAG 458
+GSIL+E++ ++G
Sbjct: 438 TGSILLEHLKVSG 450
>gi|307261195|ref|ZP_07542870.1| Protein pmbA [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
gi|306868926|gb|EFN00728.1| Protein pmbA [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
Length = 449
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/445 (39%), Positives = 275/445 (61%), Gaps = 8/445 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + LN+AKK GA + + + G SV R + + IE NND ++ + +Y+
Sbjct: 13 EQELRQAVEFALNFAKKSGA-EAEVGVTKVAGLSVSTRLEQTENIEFNNDGSLGISVYV- 70
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
GK+ GN+STSD +S+ + +A IA++T+ D A L D+ + D +LY
Sbjct: 71 -GKRK--GNASTSDLQPQSIQRAVESALAIAKYTSEDECASLADKEMMAFEAPDLELYHQ 127
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+S++ A +A E+ A N + IVN+E + + N+HG + Y S++ I
Sbjct: 128 ADISVEQAVELALETEHYALNTDERIVNSEGATFNSHSGVRVYGNTHGMLQSYLSSRYSI 187
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S I+ +++RD Y+ + + KL PE +G AA + + RL +KI T + PV+F
Sbjct: 188 SCSVISAYEDQLERDYEYTISREFGKLQSPEWVGRQAAFKAVDRLNPQKIKTCEVPVIFY 247
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L+ A ISG +LYRKS+FL+D LG +I S I E PH+L SS+FD+E
Sbjct: 248 NDVATGLIGHLAGAISGGALYRKSSFLLDKLGTQILPSWFAISERPHLLRQLASSAFDSE 307
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV TQ R ++ +G++Q Y +++YSA+K+G+KTTG++GG H+ ++ N+T D L LK
Sbjct: 308 GVITQDREIITDGVLQTYLMTSYSARKMGLKTTGHAGGIHNWLVKPNRTGGLDTL---LK 364
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M +GLLVTE +G IN +TG+YS+GA G+W+ENG+IQY V EITI+G+LQ M+K ++A+
Sbjct: 365 EMGSGLLVTEFLGSAINAVTGEYSRGAAGFWVENGEIQYPVAEITIAGQLQEMYKNLIAV 424
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
D+ R++ +GSIL++ M I+G+
Sbjct: 425 ADDIEHRSNIQTGSILLDKMKISGE 449
>gi|227114045|ref|ZP_03827701.1| peptidase PmbA [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
gi|403056715|ref|YP_006644932.1| hypothetical protein PCC21_002760 [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402804041|gb|AFR01679.1| hypothetical protein PCC21_002760 [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 446
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/429 (39%), Positives = 255/429 (59%), Gaps = 8/429 (1%)
Query: 31 KIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFC 90
+ G+ + + ++ G SV R G ++ +E N+D + + +Y Q K G++S++D
Sbjct: 26 RAGSDAAEVAVSKTTGISVSTRYGDVENVEFNSDGALGITVYHQQRK----GSASSTDLS 81
Query: 91 KKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCE 150
++ T+ AA +IAR+T+ D FAG D + L + D L+ P L D +A R E
Sbjct: 82 PDAIARTVQAALDIARYTSVDPFAGPADRDLLAFDAPDLDLFHPTELDADRGIELAARAE 141
Query: 151 NEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDN 210
A + I N E + + NSHG + Y S+H +S IA +M+RD
Sbjct: 142 QAALQADKRITNTEGGSFNSHYGVKVFGNSHGLLKSYCSSRHSMSSCVIAEVNGDMERDY 201
Query: 211 WYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLIS 270
Y+ L PE +G A+RT+SRL +K+ T + PV+F A +A L IS
Sbjct: 202 AYTVGRALDDLRSPEWVGEECARRTLSRLSPRKLPTMQAPVMFSAEVATGLFGHLVGAIS 261
Query: 271 GNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQ 330
G S+YRKSTFL+D LG++I + I E PH+L S+ FD+EGV+TQ R +VK G++Q
Sbjct: 262 GGSVYRKSTFLLDKLGQQILPEWLTIEEQPHLLRGLASTPFDSEGVRTQARDIVKAGVLQ 321
Query: 331 GYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGI 390
+ +++YSA+KLGM++TG++GG H+ I + MLK+M GLLVTELMG G+
Sbjct: 322 TWLMTSYSARKLGMQSTGHAGGIHNWRIAGQGL----DFNGMLKQMGKGLLVTELMGQGV 377
Query: 391 NYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSIL 450
+ +TGDYS+GA G+W+ENG+IQY V EITI+G L++M + IV +G+D+ TR++ GS+L
Sbjct: 378 SGVTGDYSRGASGFWVENGEIQYPVSEITIAGNLKDMLRNIVTVGNDIETRSNIQCGSVL 437
Query: 451 IENMIIAGK 459
+ M IAG+
Sbjct: 438 LPEMKIAGE 446
>gi|242241061|ref|YP_002989242.1| peptidase PmbA [Dickeya dadantii Ech703]
gi|242133118|gb|ACS87420.1| peptidase U62 modulator of DNA gyrase [Dickeya dadantii Ech703]
Length = 446
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 261/444 (58%), Gaps = 9/444 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ +Q L A G+ + + G SV R G+++ +E N+D + + +Y Q
Sbjct: 11 RKALEQAVAQALELASA-GSDAAEVAVTRTTGISVSSRYGEVENVEFNSDGALGITVYYQ 69
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K G++S++D ++ T+ AA +IAR+T+ D FAG D+ L + D L+ P
Sbjct: 70 QRK----GSASSTDISPDAIARTVRAALDIARYTSEDPFAGPADKELLAFDAPDLDLFHP 125
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
L D +A R E A + I N E + + NSHG + Y S+H +
Sbjct: 126 AELDADRGIELAARAEQAALKADKRITNTEGGSFNSHYGIKVFGNSHGMLQSYCSSRHSM 185
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S IA + +M+RD Y+ L+ PE +G A+RT++RL +K++T + PV+F
Sbjct: 186 SASVIAEQDGDMERDYAYTIGRAIGDLESPEWVGEECARRTLARLAPRKLATMEAPVMFA 245
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
A +A L ISG+S+YRKSTFL+DSLG++I + I E PH+ S+ FD+E
Sbjct: 246 AEVATGLFGHLVGAISGSSVYRKSTFLLDSLGQQILPEWLTIQELPHLRKGLASTPFDSE 305
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+T+ R +V++G++Q + L++Y+ +KLGMK+TG++GG H+ I N+ MLK
Sbjct: 306 GVRTETRDIVRDGVLQTWLLTSYAGRKLGMKSTGHAGGIHNWRIAGRGL----NVDGMLK 361
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGLLVT LMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L++M I I
Sbjct: 362 EMGTGLLVTGLMGQGVSMVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMLHNIATI 421
Query: 435 GSDVLTRNSNTSGSILIENMIIAG 458
G D+ TR++ GS+L+ +M IAG
Sbjct: 422 GDDIETRSNIQCGSVLLPSMKIAG 445
>gi|392951137|ref|ZP_10316692.1| pmbA protein [Hydrocarboniphaga effusa AP103]
gi|391860099|gb|EIT70627.1| pmbA protein [Hydrocarboniphaga effusa AP103]
Length = 451
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 180/443 (40%), Positives = 273/443 (61%), Gaps = 9/443 (2%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
+ + L Q +L+ AK GA+ + + GFSV VRK +++ +E D+++++ +Y G
Sbjct: 16 DLEPLMQRVLDAAKAAGATQAEAGLSHSRGFSVSVRKSEVESLEFQRDRDLSLTVYF--G 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K+ G++ST D + + AA IA+ T D +GL D + L D +L W
Sbjct: 74 KRK--GSASTGDLSDSGIRQAVEAAVAIAQVTEEDPCSGLADPHRLATVFPDLQLDHYWD 131
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
L A +A CE A ++ I E G++TQ+ L ANSHGF+ ++H IS
Sbjct: 132 LQPAHAVELARACEAAAMAVDARITQTEGAGLSTQRGVSLYANSHGFVGRRSGTQHSISC 191
Query: 197 SPIAIKGK-EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
+ IA MQRD WY D + LD PE IG A +RT++RL A+++STR VLF
Sbjct: 192 AVIATDANGNMQRDYWYDGGRDARLLDTPEAIGRRAGERTVARLGARRLSTRNAAVLFVP 251
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L F ISG SLYR+++FL+D L K +F+S I + + P +LG+ SS+FD+EG
Sbjct: 252 QMARSLFGHFVGAISGGSLYRRASFLLDHLDKPVFASQITLEQKPFLLGASSSSAFDHEG 311
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V T R +V+NG+++G+ L +YSA+KLG++TTGN+GG +L++ + S + +L++
Sbjct: 312 VATSDRTLVENGVLRGWLLGSYSARKLGLQTTGNAGGVFNLLV----SHGSHDYASLLRE 367
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M GL+VTELMG G+N +TGDYS+GA G+W+ENG+IQY VE TI+G L +++ +I +G
Sbjct: 368 MGEGLVVTELMGQGVNGVTGDYSRGAAGFWVENGEIQYPVENATIAGNLLDLYGRIREVG 427
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
DV TR++ GS+LI+ M+IAG
Sbjct: 428 RDVDTRSNIRCGSVLIDGMMIAG 450
>gi|418292557|ref|ZP_12904495.1| PmbA protein [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379063978|gb|EHY76721.1| PmbA protein [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 448
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/442 (39%), Positives = 269/442 (60%), Gaps = 8/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++ + ++ A++ GAS S + + G S VR+G+++ +E N D+ + +Y+ K
Sbjct: 15 LREKVERIIEEARRQGASASEVSVSMEQGLSTTVRQGEVETVEFNRDQGFGITLYVGQSK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G +ST+ ++ +T+ AA IA+ + D FAGL D + D LY PW +
Sbjct: 75 ----GTASTTGSGDDAIRETVAAALAIAKHASEDEFAGLADAALMARELPDLDLYHPWAI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE+ AF + I N + T + T Q NS+GF+ GY S+H +S
Sbjct: 131 TPEQAIEQALSCESAAFEVDQRIRNADGTSLNTHQGCRAYGNSNGFIGGYSSSRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD +Y N + L P+ IG AA+R + RL A+ I T PVLF + L
Sbjct: 191 MIAESDGQMQRDYFYDVNRIGEALLDPQTIGRRAAERAVRRLGARPIPTCDVPVLFASEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS++L D+LG+ +F + + E PHI + GS+ +D +G+
Sbjct: 251 ATGLFGHFIAAISGGNLYRKSSYLEDALGQTLFPEWLSLDERPHIPRALGSAGYDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y LSTYS +KLGM +T N+GG H+L + + ++ ++++M
Sbjct: 311 TYAKPFVENGRLLSYVLSTYSGRKLGMPSTANAGGVHNLHV----SHGDEDQAALIRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ+ V+E+TI+G L++MF+QIVA+G D
Sbjct: 367 RGLLVTELMGQGLNLVTGDYSRGAGGYWVENGEIQFPVQEVTIAGNLRDMFRQIVAVGCD 426
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
+ TR++ +GS+LIE M++AGK
Sbjct: 427 IETRSNVRTGSVLIERMMVAGK 448
>gi|416081092|ref|ZP_11586366.1| PmbA protein [Aggregatibacter actinomycetemcomitans serotype b str.
I23C]
gi|444349597|ref|ZP_21156987.1| PmbA protein [Aggregatibacter actinomycetemcomitans serotype b str.
S23A]
gi|348011115|gb|EGY51100.1| PmbA protein [Aggregatibacter actinomycetemcomitans serotype b str.
I23C]
gi|443544259|gb|ELT54285.1| PmbA protein [Aggregatibacter actinomycetemcomitans serotype b str.
S23A]
Length = 414
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 166/413 (40%), Positives = 264/413 (63%), Gaps = 7/413 (1%)
Query: 46 GFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIA 105
G SV R +I+ +E NND + + +Y+ K GN+STSD ++ T+ AA IA
Sbjct: 8 GLSVSTRLREIENVEFNNDGALGISVYLGQQK----GNASTSDLTPDAIKSTVEAALAIA 63
Query: 106 RFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNEN 165
++T+ D+ AGL D++ + + D LY + +D A +A E A ++ IVN+E
Sbjct: 64 KYTSPDDCAGLADKDLMAFDAPDLALYHAAEIEVDHAMQLALETERAALEHDARIVNSEG 123
Query: 166 TGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPE 225
+ NS+G + Y S++ +S S IA +++RD Y+ D +L QP+
Sbjct: 124 ASFNAHTGVRVYGNSYGMLQSYLSSRYSLSCSVIAEHQTQLERDYEYTVARDMTQLAQPK 183
Query: 226 IIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSL 285
+G +AA++ I+RL+ +K++T++ PV+F +A L++ ISG SLYRK++FL+D L
Sbjct: 184 WVGEHAAQKAIARLQPQKLATQQAPVIFLNDVATGLISHLTAAISGGSLYRKASFLLDHL 243
Query: 286 GKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMK 345
K++ +I+E PH++G S+ FD+EGVKTQ +++NGI+Q Y L++YS +KLGM+
Sbjct: 244 DKQVLPDWFEIVERPHLMGQLASTPFDSEGVKTQDMDIIRNGILQTYLLTSYSGRKLGMQ 303
Query: 346 TTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYW 405
+ G++GG H+ ++ K SS L +L++MN GLLVTE+MG G+N ++GDYS+GA G+W
Sbjct: 304 SNGHAGGIHNWLV---KANSSGKLTALLRQMNRGLLVTEVMGQGVNPVSGDYSRGAAGFW 360
Query: 406 IENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+ENG+IQY V EITI+G+L M + IVA+G D+ R++ +GSIL+ENM I+G
Sbjct: 361 VENGEIQYPVAEITIAGQLPEMLRNIVAVGDDIEHRSNIQTGSILLENMKISG 413
>gi|422007585|ref|ZP_16354571.1| peptidase PmbA [Providencia rettgeri Dmel1]
gi|414097475|gb|EKT59130.1| peptidase PmbA [Providencia rettgeri Dmel1]
Length = 446
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 174/458 (37%), Positives = 273/458 (59%), Gaps = 16/458 (3%)
Query: 2 EQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQ 61
EQ+ + R K + + + A+ + A+ + N+ G SV R+G+++ +E
Sbjct: 5 EQVTEQRKKLEEAVAHALEFAKTRCDAAE--------VAVNKSTGISVSTRQGEVENVEF 56
Query: 62 NNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENT 121
N+D + + +Y Q K G++S++D +++ T+ AA +IA +T+ D AG D++
Sbjct: 57 NSDGALGITVYHQQRK----GSASSTDLSPEAIERTVQAAIDIANYTSEDPCAGPADKSL 112
Query: 122 LEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSH 181
L D L+ LS ++A +A E A N + IVN E + NSH
Sbjct: 113 LAFEAPDLNLFQASELSPEEAIRLASVAEMSALNADPRIVNTEGGSFNGHYGVRVFGNSH 172
Query: 182 GFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKA 241
G + Y S++ +S IA + EM+RD Y+ L PE +G A+RT+SRL
Sbjct: 173 GMLQSYCSSRYSMSSCVIAEQNGEMERDYAYTIGRSLDALQSPEWVGQECARRTLSRLSP 232
Query: 242 KKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPH 301
+K+ T K PV+F A +A L ISG+S+YRKS+FL+DSLGK+I S + I E PH
Sbjct: 233 RKLPTMKAPVIFAAEVATGLFGHLVGAISGSSIYRKSSFLLDSLGKQILPSWLTINEQPH 292
Query: 302 ILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISN 361
++G SS FD+EGV+T +R +V+NG++Q + +++YSA+KLG+++TG++GG H+ I
Sbjct: 293 LMGGLASSPFDSEGVRTCERNIVENGVLQTWLMTSYSARKLGLQSTGHAGGIHNWRIAGQ 352
Query: 362 KTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITIS 421
+ +LK+M TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+
Sbjct: 353 GL----SFDALLKQMGTGLIVTELMGQGVSGVTGDYSRGASGFWVENGEIQYPVSEITIA 408
Query: 422 GKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
G L++M+ +V I D+ TR++ GS+LI M IAG+
Sbjct: 409 GNLKDMWANMVTIADDIETRSNIQCGSVLIPEMSIAGE 446
>gi|240949238|ref|ZP_04753582.1| antibiotic maturation factor PmbA [Actinobacillus minor NM305]
gi|240296354|gb|EER46998.1| antibiotic maturation factor PmbA [Actinobacillus minor NM305]
Length = 449
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 177/445 (39%), Positives = 276/445 (62%), Gaps = 8/445 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + L +AKK GA + + + G SV R +++ IE NND ++ + +Y+
Sbjct: 13 EQELRQAVEFALKFAKKAGA-EAEVSVTKVAGLSVSSRLEQVENIEFNNDGSLGISVYL- 70
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
GK+ GN+STSD S+ + +A IA++T+ D GL D+ + + D LY
Sbjct: 71 -GKRK--GNASTSDLQTASIQRAVESALAIAKYTSEDECTGLADKEEMAFDAPDLDLYHQ 127
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+S++ A +A EN A N + IVN+E + + N+HG + Y S++ +
Sbjct: 128 ADISVEQALEMAISTENVALNADEHIVNSEGASFNSHSGVRVYGNTHGMLQSYLSSRYSL 187
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S I+ +++RD Y+ + + KL PE +G AA + + RL +KI T + PV++
Sbjct: 188 SCSVISAYEDQLERDYEYTISREFDKLKSPEWVGQQAAFKAVDRLNPQKIKTCEVPVIYY 247
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L+ A ISG +LYRKS+FL+D LGK+I +I E PH+L SS+FD+E
Sbjct: 248 NDVATGLVGHLAGAISGGALYRKSSFLLDHLGKQILPEWFEISERPHLLRQLASSAFDSE 307
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GVKTQ R ++ G++Q Y +++YSA+K+G+KTTG++GG H+ ++ N+T L+ +LK
Sbjct: 308 GVKTQNREIITEGVLQTYLMTSYSARKMGLKTTGHAGGIHNWLVQPNRT---GGLEALLK 364
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGLLVTE +G IN +TG+YS+GA G+W+ENG+IQY V EITI+G+LQ MFK IVA+
Sbjct: 365 EMGTGLLVTEFLGSAINAVTGEYSRGAAGFWVENGEIQYPVAEITIAGQLQEMFKNIVAV 424
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
D+ R++ +GSILIE M ++G+
Sbjct: 425 AGDIEHRSNIQTGSILIERMKVSGE 449
>gi|28198336|ref|NP_778650.1| PmbA protein [Xylella fastidiosa Temecula1]
gi|182680976|ref|YP_001829136.1| peptidase U62 modulator of DNA gyrase [Xylella fastidiosa M23]
gi|386084496|ref|YP_006000778.1| peptidase U62 modulator of DNA gyrase [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|417558887|ref|ZP_12209846.1| Zn-dependent protease [Xylella fastidiosa EB92.1]
gi|28056406|gb|AAO28299.1| PmbA protein [Xylella fastidiosa Temecula1]
gi|182631086|gb|ACB91862.1| peptidase U62 modulator of DNA gyrase [Xylella fastidiosa M23]
gi|307579443|gb|ADN63412.1| peptidase U62 modulator of DNA gyrase [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|338178469|gb|EGO81455.1| Zn-dependent protease [Xylella fastidiosa EB92.1]
Length = 455
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 168/441 (38%), Positives = 260/441 (58%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+AQ +L A GA+ + + +E G V VR G ++ +E D+++ V +Y K
Sbjct: 21 LADIAQRLLERAHACGATQAEVGCSEERGLDVNVRMGDVETVESTCDRSIGVTLYFGQRK 80
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST D + SL T+ A IAR+T D GL D + D + PW L
Sbjct: 81 ----GSASTVDLQEASLEATVAQACAIARYTEDDPANGLADPVRMATVFPDLDCWHPWTL 136
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
A +A CE ++ IVN++ V+T+ + + ANSHGF+ ++H +S +
Sbjct: 137 EAGTAVDLALGCEAAGRAADARIVNSDGASVSTRFALSVYANSHGFVGRERMTQHSMSCA 196
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA G MQRD WY++ + L+ P +G AA+RT++RL+ + ++T + PVLF +
Sbjct: 197 LIAGDGDGMQRDGWYTNALAREDLELPVAVGRKAAERTVARLQPRSLATTQLPVLFVPEV 256
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS+G ++F I E PH+ S++FD EGV
Sbjct: 257 ARSLIGHLLNAVSGGALYRRASFLLDSVGTRLFPEWFAINERPHLRRGLRSATFDAEGVA 316
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T +V G++Q Y LS+YSA+KLG+++T N+GG H+L +I+N +L ++ +
Sbjct: 317 TCDAPLVAGGVLQRYVLSSYSARKLGLQSTANAGGVHNLEVIANAA----DLDALVAGLP 372
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+WIENG I Y V+ +TI+G L+ MF I A+G+D
Sbjct: 373 RGLLVTELMGSGVNPVTGDYSRGAAGFWIENGAIAYPVDGLTIAGNLREMFSAIEAVGAD 432
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+ + GS+LI M++AG
Sbjct: 433 VDRRSHVSMGSLLIGRMMVAG 453
>gi|392422370|ref|YP_006458974.1| PmbA protein [Pseudomonas stutzeri CCUG 29243]
gi|390984558|gb|AFM34551.1| PmbA protein [Pseudomonas stutzeri CCUG 29243]
Length = 448
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 177/442 (40%), Positives = 268/442 (60%), Gaps = 8/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++ + ++ A++ GAS S + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LREKVERIIEEARRQGASASEVSVSMEQGLSTTVRQREVETVEFNRDQGFGITLYVGQSK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G +ST+ ++ +T+ AA IAR + D FAGL D + D LY PW +
Sbjct: 75 ----GTASTTGSGDDAIRETVAAALAIARHASEDEFAGLADATLMARELPDLDLYHPWAV 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE+ AF F+ I N + T + T Q NS+GF+ GY S+H +S
Sbjct: 131 TPEQAIEQALSCEDAAFAFDQRIRNADGTTLNTHQGCRAYGNSNGFIGGYCSSRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD +Y N + L P+ IG AA+R + RL A+ + T + PVLF L
Sbjct: 191 MIAESEGQMQRDYFYDVNRIGEALLDPQTIGRRAAERAVRRLGARPVPTCEVPVLFAPEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRK+++L D+LG+ +F + + E PHI + GS+S+D +G+
Sbjct: 251 ATGLFGHFIAAISGGNLYRKASYLEDALGQALFPEWLSLDERPHIPRALGSASYDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y LSTYS +KLGM +T N+GG H+L + + ++ +++ M
Sbjct: 311 TYAKPFVENGRLLSYVLSTYSGRKLGMPSTANAGGVHNLFV----SHGDEDQAALIRHMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA GYWIENG+IQ+ V+E+TI+G L++MF+QIVA+G D
Sbjct: 367 RGLLVTELMGQGLNLVTGDYSRGAGGYWIENGEIQFPVQEVTIAGNLRDMFRQIVAVGCD 426
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
V TR + +GS+LIE M++AGK
Sbjct: 427 VETRGNVRTGSVLIERMMVAGK 448
>gi|92114354|ref|YP_574282.1| microcin-processing peptidase 1 [Chromohalobacter salexigens DSM
3043]
gi|91797444|gb|ABE59583.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Chromohalobacter salexigens DSM 3043]
Length = 446
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 171/448 (38%), Positives = 259/448 (57%), Gaps = 9/448 (2%)
Query: 12 IYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVII 71
+ ++ + L +AK++GA + + G V VR G ++ +E + D+ + V +
Sbjct: 8 VEQQARLEARVAQALEWAKQLGADACEVGASVDQGIGVSVRLGDVESVELSRDQGIAVTV 67
Query: 72 YIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKL 131
Y+ K G+ STSD +SL + A IA +T D +GL D + + + D +
Sbjct: 68 YVGQRK----GSVSTSDDSDESLRAAVEKAVAIAGYTGEDPASGLADASLMATDLPDLGV 123
Query: 132 YTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSK 191
+ PW LS DDA +A CE N I N++ +++ + + NSHGF+ S+
Sbjct: 124 HHPWPLSTDDAIELALACEAAGRNVEG-ITNSDGASLSSGEGVRVYGNSHGFLGSQRGSR 182
Query: 192 HIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPV 251
H +S IA G EMQRD Y+S DP + PE +G AA +T++RL A +T + PV
Sbjct: 183 HSLSCMLIAGHGAEMQRDYDYTSVRDPAAMLAPETVGRNAADKTLARLGASSPATGRMPV 242
Query: 252 LFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSF 311
LF LA L+ F I+G +LYR+++FL D LG+ +F + E P G+ S++F
Sbjct: 243 LFAPELASGLVGNFLNAIAGGALYREASFLCDRLGESVFPEWFSLREKPREYGAMASTAF 302
Query: 312 DNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKE 371
DN+GV T+ + + G + Y LS YSA++LGM TTGN+GGA +L I + +
Sbjct: 303 DNDGVATRDNVFIDRGRLASYMLSAYSARRLGMSTTGNAGGARNLRIEAPLMSR----EA 358
Query: 372 MLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQI 431
+L +M G+LVTELMG G+N +TGDYS+GA G+W+ENGKIQ+ VEE TI+G L++MF +
Sbjct: 359 LLARMERGVLVTELMGQGVNGVTGDYSRGAAGFWVENGKIQHPVEEFTIAGNLRDMFANL 418
Query: 432 VAIGSDVLTRNSNTSGSILIENMIIAGK 459
+GSD TR S +GS LI +M++AG+
Sbjct: 419 EGVGSDTDTRGSVHTGSWLIGDMMVAGE 446
>gi|253991166|ref|YP_003042522.1| pmba protein, involved in the maturation of antibiotic
[Photorhabdus asymbiotica]
gi|253782616|emb|CAQ85780.1| pmba protein, involved in the maturation of antibiotic
[Photorhabdus asymbiotica]
Length = 446
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 174/459 (37%), Positives = 267/459 (58%), Gaps = 16/459 (3%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIE 60
++Q+ + R + + S+ +LA K G + + N+ G V R G+I+ +E
Sbjct: 4 IDQIAEQRKQLENAVSQALELA--------KAGCDAAEVAVNKTTGIGVSTRFGEIENVE 55
Query: 61 QNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDEN 120
N+D + + +Y Q K G++S++D ++ T+ AA +IAR+T+ D AG D+
Sbjct: 56 FNSDGALGITVYHQQRK----GSASSTDLSPDAIARTVQAAIDIARYTSQDPCAGPADKA 111
Query: 121 TLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANS 180
L D L+ P L D A +A R E A + I N E + + NS
Sbjct: 112 LLAFEVPDLDLFHPTELDADKAIELAARAEQAALQADKRITNTEGGSFNSHYGIRVFGNS 171
Query: 181 HGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLK 240
HG + Y S+H +S +A +M+RD Y+ + + L PE +G A+R +SRL
Sbjct: 172 HGMLQSYCSSRHSMSSCVVAEVDGDMERDYAYTISRRFEDLKSPEWVGQECARRVLSRLS 231
Query: 241 AKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDP 300
+K+ T K PVLF A +A L ISG+S+YRKS+FL+D LGK+I S + I E P
Sbjct: 232 PRKLPTMKAPVLFAAEVATGLFGHLVGAISGSSIYRKSSFLLDHLGKQILPSWLTIEERP 291
Query: 301 HILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIIS 360
H+L SS FD+EGV T R ++K+G++Q + L++YSA+KLGM +TG++GG H+ I
Sbjct: 292 HLLAGLASSPFDSEGVCTSNRDIIKDGVLQTWLLTSYSARKLGMASTGHAGGIHNWCIAG 351
Query: 361 NKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITI 420
+ +L++M +GL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI
Sbjct: 352 Q----GQDFTGLLRQMGSGLVVTELMGQGVSAITGDYSRGAAGFWVENGEIQYPVSEITI 407
Query: 421 SGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+G L++M+ +V IG D+ TR++ GS+L+ M IAG+
Sbjct: 408 AGNLKDMWANMVTIGDDIETRSNIQCGSVLLSEMSIAGQ 446
>gi|424034108|ref|ZP_17773516.1| protein pmbA [Vibrio cholerae HENC-01]
gi|424038051|ref|ZP_17776710.1| protein pmbA [Vibrio cholerae HENC-02]
gi|408873602|gb|EKM12797.1| protein pmbA [Vibrio cholerae HENC-01]
gi|408894834|gb|EKM31419.1| protein pmbA [Vibrio cholerae HENC-02]
Length = 447
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 175/447 (39%), Positives = 268/447 (59%), Gaps = 12/447 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
++E +Q L A + + + + G SV R G ++ +E N+D + + +Y
Sbjct: 11 RTELEQAVSRALEIAAA-KSDAAEVAITKSTGLSVSTRMGDVENVEFNSDGALGITVY-- 67
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYT 133
+ G++STSD + ++ T+ AA +IA++T+ D FAG P E ++ P D L+
Sbjct: 68 --RGQRKGSASTSDLSEAAIEQTVLAALDIAQYTSEDPFAGPAPKEYMVKEVP-DLDLFH 124
Query: 134 PWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHI 193
P D A +A E EA N++ I ++ + + NSHG ++ Y S+H
Sbjct: 125 PDAPDPDYAAQVAIAAEKEALNYSDAIKQSDGASYDSHYGVKVYGNSHGLLASYASSRHS 184
Query: 194 ISISPIAI-KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252
S I + + EM+RD Y+ L PE++G AA++TISRL A+K+ T K PV+
Sbjct: 185 TSCCVIGVGQNGEMERDYSYTVARHRDDLWSPEMVGRKAAEKTISRLDAQKLKTGKYPVM 244
Query: 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFD 312
F A +A L+ ISG +LYRKS+FL+D LGK++ I E PH+L SS FD
Sbjct: 245 FAADVATGLIGHLVMAISGGNLYRKSSFLLDHLGKQVLPEWFNISERPHVLRGLASSPFD 304
Query: 313 NEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEM 372
+EGV TQ R ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S + N ++M
Sbjct: 305 SEGVYTQDREIITDGVLATYLLTSYAARKMKMDPTGHAGGIHNWYVKS----TGQNFEQM 360
Query: 373 LKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIV 432
LK++ TGLLVTE MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MF QIV
Sbjct: 361 LKELGTGLLVTETMGQGVNVVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFNQIV 420
Query: 433 AIGSDVLTRNSNTSGSILIENMIIAGK 459
A+GSDV TR+ +GSIL++ M +AG+
Sbjct: 421 AVGSDVETRSQIQTGSILLDTMKVAGE 447
>gi|15601985|ref|NP_245057.1| hypothetical protein PM0120 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12720333|gb|AAK02204.1| PmbA [Pasteurella multocida subsp. multocida str. Pm70]
Length = 451
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 166/433 (38%), Positives = 277/433 (63%), Gaps = 8/433 (1%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
++ A+K GA+ + + + +G SV R +I+ +E ND + + +Y+ + K GN+S
Sbjct: 26 VDLAQKAGAT-AEVAVTKVSGLSVSTRLQEIENVEFTNDGALGISVYLGNQK----GNAS 80
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ +T+ AA +IA++ + D AGL D + + + D LY + ++ A +
Sbjct: 81 TSDLSPEAIKNTVEAAISIAKYASPDECAGLADYDLMAFDAPDLALYHAADIDVEKATAL 140
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE 205
A E A +++ IVN+E + + + N+HG + Y S++ +S S IA +
Sbjct: 141 ALETEQAALSYDKRIVNSEGSAFNSHTGVRVYGNTHGMLQSYLSSRYSLSCSVIAGVEDQ 200
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
++RD Y+ + D +L+ +G + AK+T+SRL+ +K++T++ PV+F +A L++
Sbjct: 201 LERDYEYTISRDLNQLESASWVGEHCAKKTLSRLQPQKMATQQVPVIFLNDVATGLISHL 260
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
ISG SLYRKS+FL+D LGK++ I E PH++G SS FD+EGV+TQ R +++
Sbjct: 261 TAAISGGSLYRKSSFLLDHLGKQVLPDWFHISEQPHLIGQLASSPFDSEGVRTQCREIIQ 320
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
G +Q Y L++YS KKLGM++TG++GG H+ ++ N T L +L++M TGLLVT+L
Sbjct: 321 QGTLQTYLLTSYSGKKLGMRSTGHAGGIHNWLVKPNTT---GGLTTLLRQMGTGLLVTDL 377
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+L+ M + IVA+G D+ R++
Sbjct: 378 MGQGVNLVTGDYSRGAAGFWVENGEIQYPVAEITIAGQLKEMLRNIVAVGDDIEHRSNIQ 437
Query: 446 SGSILIENMIIAG 458
+GSIL+E++ ++G
Sbjct: 438 TGSILLEHLKVSG 450
>gi|336248407|ref|YP_004592117.1| peptidase PmbA [Enterobacter aerogenes KCTC 2190]
gi|444353515|ref|YP_007389659.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Enterobacter aerogenes EA1509E]
gi|334734463|gb|AEG96838.1| peptidase PmbA [Enterobacter aerogenes KCTC 2190]
gi|443904345|emb|CCG32119.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Enterobacter aerogenes EA1509E]
Length = 446
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 170/453 (37%), Positives = 274/453 (60%), Gaps = 11/453 (2%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHS---SIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
K I ++ ++ ++ ++ A ++ A S + ++ G V R G+++ +E N+D
Sbjct: 2 KVISQVAQQRKTLEEAVSTALELAAGKSDGAEVSVSKTTGIGVSTRYGEVENVEFNSDGA 61
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +Y Q+ K G++S++D ++ T+ AA +IAR+T+ D FAG+ D+ L +
Sbjct: 62 LGITVYHQNRK----GSASSTDLSPDAIARTVQAALDIARYTSPDPFAGVADKELLAFDA 117
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D L+ P +S D+A +A R E A + I N E + + NS+G +
Sbjct: 118 PDLDLFHPAEVSPDEAIELAARAEQAALQADKRITNTEGGSFNSHYGIKVFGNSYGMLQS 177
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
Y ++H +S IA + +M+RD Y+ L PE +G A+RT+SRL +K+ST
Sbjct: 178 YCSTRHSLSSCVIAEENGDMERDYAYTIGRAIGDLQTPEWVGNECARRTLSRLAPRKLST 237
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
K PV+F +A L I+G ++YRKSTFL+DSLGK+I + I E PH+L
Sbjct: 238 MKAPVIFANEVATGLFGHLVGAIAGGAVYRKSTFLLDSLGKQILPEWLTIEEHPHLLKGL 297
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
S+ FD+EGV+T++R ++K+G++ + L+ YSA+KLGMK+TG++GG H+ I
Sbjct: 298 ASTPFDSEGVRTERRDIIKDGVLTQWLLTNYSARKLGMKSTGHAGGIHNWRINGRGL--- 354
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+ +MLK+M TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L+
Sbjct: 355 -SFAKMLKEMGTGLVVTELMGQGVSGVTGDYSRGASGFWVENGEIQYPVSEITIAGNLKE 413
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ IV +G D+ TR++ GS+L+ M IAG+
Sbjct: 414 MWRNIVTVGDDIETRSNIQCGSVLLPEMKIAGQ 446
>gi|410646233|ref|ZP_11356686.1| microcin-processing peptidase 1 [Glaciecola agarilytica NO2]
gi|410134173|dbj|GAC05085.1| microcin-processing peptidase 1 [Glaciecola agarilytica NO2]
Length = 441
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 172/443 (38%), Positives = 268/443 (60%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
++ QQ+ +D+L AK+ GA+ + ++ G +V R +++ +E ND + + +Y
Sbjct: 6 TDIQQIVEDVLKLAKEKGATQAEASMSKVKGIAVSSRLKEVETVEFTNDGGLGITVY--- 62
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
K G++ST+D +L T+ A IA++T D+ +GL D+ + P D LY P
Sbjct: 63 -KGQRKGSASTADLSPDALRLTVEKAIEIAKYTGEDDCSGLADKALMAFEPQDLDLYHPV 121
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L+ D A + E A + I N++ + NSHG GY S++ +S
Sbjct: 122 ELNTDFAIEQVIKAETAALGCDPRITNSDGASYNANLGTKVYGNSHGLNVGYNSSRYSMS 181
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD Y+ + + PE IG +A+ T++RL A++I T K PVLF+
Sbjct: 182 CVVIGEQDGDMQRDYSYTVDRQANLMASPEQIGKESAEFTLARLGARQIKTAKVPVLFDK 241
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L+ F ISG +LYRKS+FL+D LG+++ S I E P I+ SS+FD+EG
Sbjct: 242 EIASGLIGHFISAISGGNLYRKSSFLLDKLGEQVLPSWFNISERPFIMRGLASSAFDHEG 301
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T+ +V +G++ Y L++YSA+K+ M+TTG++GG H+ +I S S + ++ML +
Sbjct: 302 VRTKDSEIVTDGVLNQYLLTSYSARKMKMQTTGHAGGIHNWLIKS----SGQSDQQMLAE 357
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
+ TGLLVTELMG G+N +TGDYS+GA G+W+ENG IQY V EITI+G L +M K IVA+G
Sbjct: 358 LGTGLLVTELMGQGVNVVTGDYSRGAAGFWVENGVIQYPVHEITIAGNLADMLKNIVAVG 417
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
+++ +R S +GSILI+NM +AG
Sbjct: 418 AEIESRGSIQTGSILIDNMQVAG 440
>gi|410626677|ref|ZP_11337430.1| PmbA protein [Glaciecola mesophila KMM 241]
gi|410153778|dbj|GAC24199.1| PmbA protein [Glaciecola mesophila KMM 241]
Length = 441
Score = 327 bits (839), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 175/443 (39%), Positives = 264/443 (59%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
++ QQ+ +D+L AK+ GA+ + ++ G +V R +++ +E ND + + +Y
Sbjct: 6 TDIQQIVEDVLKLAKEKGATQAEASMSKVRGIAVSSRLKEVETVEFTNDGGLGITVY--- 62
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
K G++ST+D ++L T+ A IA++T D+ +GL D+ + P D L+ P
Sbjct: 63 -KGQRKGSASTADLSPQALRLTVEKAIEIAKYTGEDDCSGLADKELMAFEPQDLDLFHPI 121
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L D A E A F+ I N++ + NSHG GY S++ +S
Sbjct: 122 ELDTDFAIEQVITAETAALAFDPRITNSDGASYNANLGTKVYGNSHGLNVGYNSSRYSMS 181
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD Y+ + PE IG +A+ T+ RL A++I T K PVLF+
Sbjct: 182 CVVIGEQDGDMQRDYSYTVERQADLMASPEQIGKESAEFTLGRLGARQIKTAKVPVLFDK 241
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L+ F ISG +LYRKS+FL+D LG+++ + I E P I+ SS+FD+EG
Sbjct: 242 EIASGLIGHFISAISGGNLYRKSSFLLDKLGEQVLPNWFSISERPFIMRGLASSAFDHEG 301
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T+ +V +GI+ Y L++YSA+K+ M+TTG++GG H+ +I T SD K+ML +
Sbjct: 302 VRTKDSEIVTDGILNQYLLTSYSARKMKMQTTGHAGGIHNWLI--KPTGQSD--KQMLAE 357
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
+ TGLLVTELMG G+N +TGDYS+GA G+W+ENG IQY V EITI+G L +M K IVA+G
Sbjct: 358 LGTGLLVTELMGQGVNVVTGDYSRGAAGFWVENGVIQYPVHEITIAGNLADMLKNIVAVG 417
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
S + R S +GSILI+NM +AG
Sbjct: 418 SQIERRGSIQTGSILIDNMQVAG 440
>gi|421498578|ref|ZP_15945673.1| protein PmbA [Aeromonas media WS]
gi|407182379|gb|EKE56341.1| protein PmbA [Aeromonas media WS]
Length = 447
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 176/443 (39%), Positives = 264/443 (59%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ + + + L AK +GA + + ++ G SV R +++ IE N D + + +Y ++
Sbjct: 12 AHLEAVVAEALEIAKGLGAGLAEVSISKQTGLSVNTRGCELESIEFNKDGALGIAVY-RN 70
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
G K G+SST+D K ++ + AA IAR T+ D +AGL D L + D +L
Sbjct: 71 GCK---GSSSTTDLGKPAIRAAVEAAMEIARHTSPDEYAGLADAELLAWDAPDLQLCHSI 127
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L +A CE A ++ I +++ ++ + NSHGF+ GY S++ +S
Sbjct: 128 ELDPQRGIELAIECERLALGRDARIKHSDGASFSSHLGVKVYGNSHGFVKGYAASRNSLS 187
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD YSS+ L P+ I A +RT+SRL A+KISTR PVLF
Sbjct: 188 CVLIGEQDGDMQRDYGYSSSRALSGLWSPQRIADEAVERTVSRLGARKISTRHAPVLFHP 247
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
A L ISG +LYRKS+FL+D LGK+I + I E PH+LG S+ FD EG
Sbjct: 248 DTAAGLWGHLVMAISGGNLYRKSSFLLDKLGKQILPEWLSIQEFPHLLGGLASTPFDGEG 307
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T+ +V+NG + + L++YSA+KLG+ TTG++GG H+ + + + + + MLK+
Sbjct: 308 VRTRDMDIVRNGELMSWLLTSYSARKLGLTTTGHAGGIHNWQV----SNTGQDFQGMLKE 363
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGLLVTELMG G+N + GDYS+GA G+W+ENG+I Y VEEITI+G L +MF +VA+G
Sbjct: 364 MGTGLLVTELMGQGVNIVNGDYSRGAAGFWVENGEILYPVEEITIAGNLADMFSTLVAVG 423
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
+D R+S +GS+L+E M +AG
Sbjct: 424 NDEDERSSLKTGSVLVEQMKLAG 446
>gi|311281221|ref|YP_003943452.1| peptidase U62 modulator of DNA gyrase [Enterobacter cloacae SCF1]
gi|308750416|gb|ADO50168.1| peptidase U62 modulator of DNA gyrase [Enterobacter cloacae SCF1]
Length = 450
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 168/453 (37%), Positives = 272/453 (60%), Gaps = 11/453 (2%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHS---SIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
K I +E ++ + ++ A ++ A S + + G SV R G+++ +E N+D
Sbjct: 6 KVITQVAEQRKALEKAVSTALELAAGKSDGAEVSVTKSTGISVSTRYGEVENVEFNSDGA 65
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +Y Q+ K G++S++D ++ T+ AA +IAR+T+ D FAG+ ++ L +
Sbjct: 66 LGITVYHQNRK----GSASSTDLSPDAIARTVQAALDIARYTSPDPFAGVAEKELLAFDA 121
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D L+ P ++ D A +A R E A + + I N E + + NSHG +
Sbjct: 122 PDLDLFHPAEVTPDQAIELAARAEQSALDVDKRITNTEGGSFNSHYGIKVFGNSHGMLQS 181
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
Y ++H +S IA + EM+RD Y+ L PE +G A+RT+SRL +K++T
Sbjct: 182 YCSTRHSLSSCVIAEENGEMERDYAYTIGRAMGDLQNPEWVGAECARRTLSRLSPRKLAT 241
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
+ PV+F +A L I+G ++YRKSTFL+DS+GK+I + I E PH+
Sbjct: 242 MQAPVIFANEVATGLFGHLVGAIAGGAVYRKSTFLLDSMGKQILPDWLTIEEHPHLRKGL 301
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
S+ FD+EGV+T++R ++K+G++ + L+ YSA+KLG+K+TG++GG H+ I
Sbjct: 302 ASTPFDSEGVRTERRDIIKDGVLTQWLLTNYSARKLGLKSTGHAGGIHNWRIAGRGL--- 358
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+ ++LK+M TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G LQ+
Sbjct: 359 -SFAKLLKEMGTGLVVTELMGQGVSGITGDYSRGASGFWVENGEIQYPVSEITIAGNLQD 417
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ IV I D+ TR++ GS+L+ M IAG+
Sbjct: 418 MWRNIVTIADDIETRSNIQCGSVLLPEMKIAGQ 450
>gi|332308455|ref|YP_004436306.1| peptidase U62 modulator of DNA gyrase [Glaciecola sp. 4H-3-7+YE-5]
gi|332175784|gb|AEE25038.1| peptidase U62 modulator of DNA gyrase [Glaciecola sp. 4H-3-7+YE-5]
Length = 441
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 172/443 (38%), Positives = 268/443 (60%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
++ QQ+ +D+L AK+ GA+ + ++ G +V R +++ +E ND + + +Y
Sbjct: 6 TDIQQIVEDVLKLAKEKGATQAEASMSKVKGIAVSSRLKEVETVEFTNDGGLGITVY--- 62
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
K G++ST+D +L T+ A IA++T D+ +GL D+ + P D LY P
Sbjct: 63 -KGQRKGSASTADLSPDALRLTVEKAIEIAKYTGEDDCSGLADKALMAFEPKDLDLYHPV 121
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L+ D A + E A + I N++ + NSHG GY S++ +S
Sbjct: 122 ELNTDFAIEQVIKAETAALGCDPRITNSDGASYNANLGTKVYGNSHGLNVGYNSSRYSMS 181
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD Y+ + + PE IG +A+ T++RL A++I T K PVLF+
Sbjct: 182 CVVIGEQDGDMQRDYSYTVDRQANLMASPEQIGKESAEFTLARLGARQIKTAKVPVLFDK 241
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L+ F ISG +LYRKS+FL+D LG+++ S I E P I+ SS+FD+EG
Sbjct: 242 EIASGLIGHFISAISGGNLYRKSSFLLDKLGEQVLPSWFNISERPFIMRGLASSAFDHEG 301
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T+ +V +G++ Y L++YSA+K+ M+TTG++GG H+ +I S S + ++ML +
Sbjct: 302 VRTKDSEIVTDGVLNQYLLTSYSARKMKMQTTGHAGGIHNWLIKS----SGQSDQQMLAE 357
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
+ TGLLVTELMG G+N +TGDYS+GA G+W+ENG IQY V EITI+G L +M K IVA+G
Sbjct: 358 LGTGLLVTELMGQGVNVVTGDYSRGAAGFWVENGVIQYPVHEITIAGNLADMLKNIVAVG 417
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
+++ +R S +GSILI+NM +AG
Sbjct: 418 AEIESRGSIQTGSILIDNMQVAG 440
>gi|269963391|ref|ZP_06177719.1| Protein pmbA [Vibrio harveyi 1DA3]
gi|424047789|ref|ZP_17785346.1| protein pmbA [Vibrio cholerae HENC-03]
gi|269831870|gb|EEZ86001.1| Protein pmbA [Vibrio harveyi 1DA3]
gi|408883468|gb|EKM22251.1| protein pmbA [Vibrio cholerae HENC-03]
Length = 447
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 175/447 (39%), Positives = 268/447 (59%), Gaps = 12/447 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
++E +Q L A + + + + G SV R G ++ +E N+D + + +Y
Sbjct: 11 RTELEQAVSRALEIAAA-KSDAAEVAITKSTGLSVSTRMGDVENVEFNSDGALGITVY-- 67
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYT 133
+ G++STSD + ++ T+ AA +IA++T+ D FAG P E ++ P D L+
Sbjct: 68 --RGQRKGSASTSDLSEAAIEQTVLAALDIAQYTSEDPFAGPAPKEYMVKEVP-DLDLFH 124
Query: 134 PWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHI 193
P D A +A E EA N++ I ++ + + NSHG ++ Y S+H
Sbjct: 125 PDAPDPDYAAQVAIAAEKEALNYSDAIKQSDGASYDSHYGVKVYGNSHGLLASYASSRHS 184
Query: 194 ISISPIAI-KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252
S I + + EM+RD Y+ L PE++G AA++TISRL A+K+ T K PV+
Sbjct: 185 TSCCVIGVGQNGEMERDYSYTVARHRDDLWSPEMVGRKAAEKTISRLDAQKLKTGKYPVM 244
Query: 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFD 312
F A +A L+ ISG +LYRKS+FL+D LGK++ I E PH+L SS FD
Sbjct: 245 FAADVATGLIGHLVMAISGGNLYRKSSFLLDHLGKQVLPEWFNISERPHVLRGLASSPFD 304
Query: 313 NEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEM 372
+EGV TQ R ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S + N ++M
Sbjct: 305 SEGVYTQDREIITDGVLATYLLTSYAARKMKMDPTGHAGGIHNWYVNS----TGQNFEQM 360
Query: 373 LKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIV 432
LK++ TGLLVTE MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MF QIV
Sbjct: 361 LKELGTGLLVTETMGQGVNVVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFNQIV 420
Query: 433 AIGSDVLTRNSNTSGSILIENMIIAGK 459
A+GSDV TR+ +GSIL++ M +AG+
Sbjct: 421 AVGSDVETRSQIQTGSILLDTMKVAGE 447
>gi|50119242|ref|YP_048409.1| peptidase PmbA [Pectobacterium atrosepticum SCRI1043]
gi|49609768|emb|CAG73202.1| putative modulator of DNA gyrase [Pectobacterium atrosepticum
SCRI1043]
Length = 446
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 168/427 (39%), Positives = 254/427 (59%), Gaps = 8/427 (1%)
Query: 33 GASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKK 92
G+ + + ++ G SV R G ++ +E N+D + + +Y Q K G++S++D
Sbjct: 28 GSDAAEVAVSKTTGISVSTRYGDVENVEFNSDGALGITVYHQQRK----GSASSTDLSPD 83
Query: 93 SLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENE 152
++ T+ AA +IAR+T+ D FAG D + L + D L+ P L D +A R E
Sbjct: 84 AIARTVQAALDIARYTSVDPFAGPADRDLLAFDAPDLDLFHPTELDADRGIELAARAEQA 143
Query: 153 AFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWY 212
A + I N E + + NSHG + Y S+H +S IA M+RD Y
Sbjct: 144 ALQADKRITNTEGGSFNSHYGVKVFGNSHGLLKSYCSSRHSMSSCVIAEVNGNMERDYAY 203
Query: 213 SSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGN 272
+ + L PE +G A+RT+SRL +K+ T + PV+F A +A L ISG
Sbjct: 204 TIGRALEDLRSPEWVGEECARRTLSRLSPRKLPTMQAPVMFSAEVATGLFGHLVGAISGG 263
Query: 273 SLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGY 332
S+YRKSTFL+D LG++I + I E PH+L S+ FD+EGV+TQ R +VK G++Q +
Sbjct: 264 SVYRKSTFLLDKLGQQILPEWLTIEEHPHLLKGLASTPFDSEGVRTQARDIVKAGVLQTW 323
Query: 333 FLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINY 392
+++YSA+KLGM++TG++GG H+ I + MLK+M GLLVTELMG G++
Sbjct: 324 LMTSYSARKLGMQSTGHAGGIHNWRIAGQGL----DFNGMLKQMGKGLLVTELMGQGVSG 379
Query: 393 ITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIE 452
+TGDYS+GA G+W+ENG+IQY V EITI+G L++M + IV +G+D+ TR++ GS+L+
Sbjct: 380 VTGDYSRGASGFWVENGEIQYPVSEITIAGNLKDMLRNIVTVGNDIETRSNIQCGSVLLP 439
Query: 453 NMIIAGK 459
M IAG+
Sbjct: 440 EMKIAGE 446
>gi|410643186|ref|ZP_11353688.1| PmbA protein [Glaciecola chathamensis S18K6]
gi|410137364|dbj|GAC11875.1| PmbA protein [Glaciecola chathamensis S18K6]
Length = 441
Score = 327 bits (838), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 172/443 (38%), Positives = 268/443 (60%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
++ QQ+ +D+L AK+ GA+ + ++ G +V R +++ +E ND + + +Y
Sbjct: 6 TDIQQIVEDVLKLAKEKGATQAEASMSKVKGIAVSSRLKEVETVEFTNDGGLGITVY--- 62
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
K G++ST+D +L T+ A IA++T D+ +GL D+ + P D LY P
Sbjct: 63 -KGQRKGSASTADLSPDALRLTVEKAIEIAKYTGEDDCSGLADKALMAFEPQDLDLYHPV 121
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L+ D A + E A + I N++ + NSHG GY S++ +S
Sbjct: 122 ELNTDFAIEQVIKAETAALGRDPRITNSDGASYNANLGTKVYGNSHGLNVGYNSSRYSMS 181
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD Y+ + + PE IG +A+ T++RL A++I T K PVLF+
Sbjct: 182 CVVIGEQDGDMQRDYSYTVDRQANLMASPEQIGKESAEFTLARLGARQIKTAKVPVLFDK 241
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L+ F ISG +LYRKS+FL+D LG+++ S I E P I+ SS+FD+EG
Sbjct: 242 EIASGLIGHFISAISGGNLYRKSSFLLDKLGEQVLPSWFNISERPFIMRGLASSAFDHEG 301
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T+ +V +G++ Y L++YSA+K+ M+TTG++GG H+ +I S S + ++ML +
Sbjct: 302 VRTKDSEIVTDGVLNQYLLTSYSARKMKMQTTGHAGGIHNWLIKS----SGQSDQQMLAE 357
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
+ TGLLVTELMG G+N +TGDYS+GA G+W+ENG IQY V EITI+G L +M K IVA+G
Sbjct: 358 LGTGLLVTELMGQGVNVVTGDYSRGAAGFWVENGVIQYPVHEITIAGNLADMLKNIVAVG 417
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
+++ +R S +GSILI+NM +AG
Sbjct: 418 AEIESRGSIQTGSILIDNMQVAG 440
>gi|261493090|ref|ZP_05989628.1| U62 family microcin-processing peptidase 1 [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261494871|ref|ZP_05991348.1| U62 family microcin-processing peptidase 1 [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261309495|gb|EEY10721.1| U62 family microcin-processing peptidase 1 [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261311225|gb|EEY12390.1| U62 family microcin-processing peptidase 1 [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 449
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 174/455 (38%), Positives = 283/455 (62%), Gaps = 8/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
I ++ + + E +Q + LN+AK+ GA + + + G SV R +++ IE NND
Sbjct: 3 ITDKQTLLQQEQELRQAVEFALNFAKQAGA-EAEVGVTKVAGLSVSSRLEQVENIEFNND 61
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
++ + +Y+ K GN+STSD +S+ T+ AA IA++T+ D GL D+ L
Sbjct: 62 GSLGISVYLVKRK----GNASTSDLQPESIQKTVEAALAIAKYTSEDACTGLADKELLAF 117
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
D +LY +S+D A +A E+ A N + IVN++ + + N+HG +
Sbjct: 118 EAEDLELYHQADISVDQAVELAIEAEHYALNADEKIVNSDGATFNSHSGVRVYGNTHGML 177
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S++ +S S I+ +++RD Y+ + + KL P+ +G AA + + RL ++I
Sbjct: 178 QSYLSSRYSLSCSVISAYEDQLERDYEYTISREFDKLQAPKWVGEQAAIKAVDRLNPQRI 237
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
T + PV+F +A L+ A ISG +LYRKS+FL+D LG++I S I E PH+L
Sbjct: 238 KTGEMPVIFYNDVATGLVGHLAGAISGGALYRKSSFLLDKLGEQILPSWFAISERPHLLR 297
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
SS+FD+EGV TQ R ++ +GI+Q Y +++YS +K+G+K+TG++GG H+ ++ N+T
Sbjct: 298 QLASSAFDSEGVITQDREIITDGILQTYLMTSYSGRKMGLKSTGHAGGIHNWLVKPNRT- 356
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
L +LK+M TGLLVTE++G IN +TG+YS+GA G+W+ENG+IQY V EITI+G+L
Sbjct: 357 --GGLNSLLKEMGTGLLVTEMLGSTINSVTGEYSRGAAGFWVENGEIQYPVAEITIAGQL 414
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
Q+M+K +VA+G D+ R++ +GSIL+E M+++G+
Sbjct: 415 QDMYKNLVAVGDDIEHRSNIQTGSILLEKMMVSGE 449
>gi|153834573|ref|ZP_01987240.1| PmbA protein [Vibrio harveyi HY01]
gi|148869016|gb|EDL68061.1| PmbA protein [Vibrio harveyi HY01]
Length = 447
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 176/447 (39%), Positives = 267/447 (59%), Gaps = 12/447 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
++E +Q L A + + + + G SV R G ++ +E N+D + + +Y
Sbjct: 11 RTELEQAVSRALEIAAA-KSDAAEVAITKSTGLSVSTRMGDVENVEFNSDGALGITVY-- 67
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYT 133
+ G++STSD + ++ T+ AA +IA++T+ D FAG P E ++ P D L+
Sbjct: 68 --RGQRKGSASTSDLSEAAIEQTVLAALDIAQYTSEDPFAGPAPKEYMVKEVP-DLDLFH 124
Query: 134 PWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHI 193
P D A +A E EA N++ I ++ + + NSHG ++ Y S+H
Sbjct: 125 PDAPDPDYAAQVAIAAEKEALNYSDAIKQSDGASYDSHYGVKVYGNSHGLLASYASSRHS 184
Query: 194 ISISPIAI-KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252
S I + + EM+RD Y+ L PE +G AA++TISRL A+K+ T K PV+
Sbjct: 185 TSCCVIGVGQNGEMERDYSYTVARHRDDLWTPETVGRNAAEKTISRLDAQKLKTGKYPVM 244
Query: 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFD 312
F A +A L+ ISG +LYRKS+FL+D LGK++ I E PHIL SS FD
Sbjct: 245 FAADVATGLIGHLVMAISGGNLYRKSSFLLDHLGKQVLPEWFNISERPHILRGLASSPFD 304
Query: 313 NEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEM 372
+EGV TQ R ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S + N ++M
Sbjct: 305 SEGVYTQDREIITDGVLATYLLTSYAARKMKMDPTGHAGGIHNWYVKS----TGQNFEQM 360
Query: 373 LKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIV 432
LK++ TGLLVTE MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MF QIV
Sbjct: 361 LKELGTGLLVTETMGQGVNVVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFNQIV 420
Query: 433 AIGSDVLTRNSNTSGSILIENMIIAGK 459
A+GSDV TR+ +GSIL++ M +AG+
Sbjct: 421 AVGSDVETRSQIQTGSILLDTMKVAGE 447
>gi|448244106|ref|YP_007408159.1| putative peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Serratia marcescens WW4]
gi|445214470|gb|AGE20140.1| putative peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Serratia marcescens WW4]
Length = 446
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 167/455 (36%), Positives = 270/455 (59%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K ++ + +Q L A+ G+ + + + G SV R G+++ +E N+D
Sbjct: 1 MKVVTQVAEQRKALEQAVSQALELARA-GSDAAEVAVTKSTGISVSTRFGEVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y + K G++S++D ++ T+ AA +IAR+T+ D A +++ L
Sbjct: 60 GALGITVYHRQRK----GSASSTDLSPDAIARTVQAALDIARYTSEDPCACPAEKDLLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
D L+ P L + +A R E + + I N E + + NSHG +
Sbjct: 116 EAPDLDLFHPTELDAERGIELAARAEQASLAADKRITNTEGGSFNSHYGIKVFGNSHGML 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S+H +S IA + +M+RD Y+ L PE +G A+RT++RL +K+
Sbjct: 176 QSYCSSRHSLSSCVIAEQDGDMERDYAYTIGRAMGDLHSPEWVGQECARRTLARLAPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
ST K PVLF + +A L ISG+S+YRKSTFL+DSLGK+I + + + E PH+L
Sbjct: 236 STMKAPVLFASEVATGLFGHLVGAISGSSVYRKSTFLLDSLGKQILPAWLTVEEHPHLLK 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+TQ+R +VK+G++Q + +++YSA+KLG+ +TG++GG H+ I
Sbjct: 296 GLASTPFDSEGVRTQRRDIVKDGVLQTWLMTSYSARKLGLHSTGHAGGIHNWRIAGQGA- 354
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ MLK++ TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L
Sbjct: 355 ---DFAGMLKQLGTGLVVTELMGQGVSGVTGDYSRGAAGFWVENGEIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M + IV++GSD+ TR++ GS+L+ M IAG+
Sbjct: 412 KDMLRNIVSVGSDIETRSNIQCGSVLLPEMKIAGQ 446
>gi|389792366|ref|ZP_10195661.1| putative Zn-dependent protease-like protein [Rhodanobacter
spathiphylli B39]
gi|388431225|gb|EIL88310.1| putative Zn-dependent protease-like protein [Rhodanobacter
spathiphylli B39]
Length = 457
Score = 327 bits (837), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 171/444 (38%), Positives = 264/444 (59%), Gaps = 8/444 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
LA D++ A+ GAS + + + +G +V VR G+++ +E D+ + +Y K
Sbjct: 20 LADLAADVIRRARAAGASQAEVAASISSGLNVNVRLGEVETVEHTRDRGFGLTVYFGQRK 79
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST+D S+ T++ A IAR+T D AGL D + + D L+ PW
Sbjct: 80 ----GSASTADLNPDSIQATLDQACAIARYTEEDPAAGLADAARMATSFPDLDLWHPW-- 133
Query: 138 SIDDAKLIAYRCENE-AFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
SID A+ I E A + I N++ V + + ANSHGF+ ++H +S+
Sbjct: 134 SIDTAQAIELGIAIEDAGRAHPGISNSDGASVQAGEGLSVYANSHGFVGRERGTRHSLSL 193
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
+ IA MQRD WY S + +G AA+RT++RL A+ +STR+CPVLF
Sbjct: 194 ALIAGDDDGMQRDYWYDSVRAAGDFMSAQALGDKAAERTLARLGARSLSTRQCPVLFVPE 253
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L+ +SG +LYR+++FL+D +GK + + + I E PH+ GS++FD EGV
Sbjct: 254 LARGLIGHLLNAVSGGALYRQASFLLDQVGKPVMPAWLDINERPHLARGQGSANFDAEGV 313
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS-DNLKEMLKK 375
T +V+ G++ Y LS+YSA+KLG+ +TGN+GG H+L++ + + ML +
Sbjct: 314 ATVDSALVERGVLARYMLSSYSARKLGLSSTGNAGGIHNLVVDAGAADGERSDFDGMLAR 373
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
+ TGLL+TE+MG G++ +TGDYS+GA G+W+ENGKI Y VE ITI+ L++MF IVA+G
Sbjct: 374 LGTGLLLTEVMGQGVSTVTGDYSRGASGFWVENGKIAYPVEGITIAANLRDMFNGIVAVG 433
Query: 436 SDVLTRNSNTSGSILIENMIIAGK 459
SDV R+ +GSIL++ M +AG+
Sbjct: 434 SDVDIRSHLLTGSILLDRMTVAGE 457
>gi|449471085|ref|XP_004153204.1| PREDICTED: protein PmbA-like, partial [Cucumis sativus]
Length = 439
Score = 327 bits (837), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 169/424 (39%), Positives = 261/424 (61%), Gaps = 11/424 (2%)
Query: 25 MLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNS 84
ML K GA + ++ G SV R G+++ +E N+D + + +Y Q+ K G++
Sbjct: 27 MLASGKSDGAE---VAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSA 79
Query: 85 STSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKL 144
S++D ++ T+ AA +IAR+T+ D +AG+ D+ L + D L+ P ++ D+A
Sbjct: 80 SSTDLSPDAIARTVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPAEVTPDEAIE 139
Query: 145 IAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK 204
+A R E + + I N E + + NSHG + GY ++H +S IA +
Sbjct: 140 LASRAEQASLQADKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENG 199
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
+M+RD Y+ L PE +G A+RT+SRL +K+ST K PV+F +A L
Sbjct: 200 DMERDYAYTIGRALGDLQSPEWVGKECAERTLSRLSPRKLSTMKAPVIFANEVATGLFGH 259
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
I+G S+YRKSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R +V
Sbjct: 260 LVGAIAGGSVYRKSTFLLDSLGKQILPEWLTIEEHPHLLKGLASTPFDSEGVRTERRDIV 319
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
K+GI+ + L+ YSA+KLG+K+TG++GG H+ I N ++MLK+M TGL+VTE
Sbjct: 320 KDGILTQWLLTNYSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQMLKEMGTGLVVTE 375
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
LMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++
Sbjct: 376 LMGQGVSGITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNI 435
Query: 445 TSGS 448
GS
Sbjct: 436 QCGS 439
>gi|285019216|ref|YP_003376927.1| modulator of DNA gyrase [Xanthomonas albilineans GPE PC73]
gi|283474434|emb|CBA16935.1| putative modulator of dna gyrase protein [Xanthomonas albilineans
GPE PC73]
Length = 455
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/441 (37%), Positives = 263/441 (59%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+A+ +L A+ +GAS + + +E G V VR G ++ +E D+ + V +Y K
Sbjct: 20 LSDIAERLLARARALGASQAEVSCSEDRGIDVNVRMGAVETVESTRDRGIGVTVYFGQRK 79
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST+D SL T+ A IAR+T D AGL + + D + PW L
Sbjct: 80 ----GSASTADLHDASLEATVAQACAIARYTEDDAAAGLAEAALMAREMPDLDRWHPWAL 135
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
++A +A CE + + I N++ V + +S + ANSHGF+ + H IS +
Sbjct: 136 QAEEAIELALACEAAGRDADPRISNSDGASVGSSESLSVYANSHGFVGCERSTHHAISCA 195
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G MQRD WYSS ++L++P IG AA+RT++RL+ + + T + PVLF +
Sbjct: 196 LIAGQGDGMQRDGWYSSTLAREELERPAAIGRRAAERTVARLQPRSLPTGEVPVLFAPEM 255
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ +SG +LYR+++FL+DS G ++F I E PH+ S+ FD++GV
Sbjct: 256 ARSLIGYLLGAVSGGALYRRASFLLDSAGTRLFPEWFAIDELPHLRRGLRSAFFDSDGVA 315
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T++ +V G++Q Y L +YSA++LG++TT N+GG H+L + +N +L ++ +
Sbjct: 316 TRQAPLVSGGVLQRYVLGSYSARRLGLQTTANAGGVHNLKVAANAA----DLATIIAGVP 371
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVT+LMG+G+N +TGDYS+GA G+WIENG I Y V+E+TI+G L+ MF++I A+G+D
Sbjct: 372 RGLLVTDLMGNGVNLVTGDYSRGAGGFWIENGAIAYPVDEVTIAGNLRQMFQRIEAVGAD 431
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R+ G+ LI M +AG
Sbjct: 432 IDVRSHLHIGATLIGAMTVAG 452
>gi|350532516|ref|ZP_08911457.1| peptidase PmbA [Vibrio rotiferianus DAT722]
Length = 447
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/447 (39%), Positives = 267/447 (59%), Gaps = 12/447 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
++E +Q L A + + + + G SV R G ++ +E N+D + + +Y
Sbjct: 11 RTELEQAVSRALEIAAA-KSDAAEVAITKSTGLSVSTRMGDVENVEFNSDGALGITVY-- 67
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYT 133
+ G++STSD + ++ T+ AA +IA++T+ D FAG P E ++ P D L+
Sbjct: 68 --RGQRKGSASTSDLSEAAIEQTVLAALDIAQYTSEDPFAGPAPKEYMVKEVP-DLDLFH 124
Query: 134 PWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHI 193
P D A +A E EA N++ I ++ + + NSHG ++ Y S+H
Sbjct: 125 PDAPDPDYAAQVAIAAEKEALNYSDAIKQSDGASYDSHYGVKVYGNSHGLLASYASSRHS 184
Query: 194 ISISPIAI-KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252
S I + + EM+RD Y+ L PE +G AA++TISRL A+K+ T K PV+
Sbjct: 185 TSCCVIGVGQNGEMERDYSYTVARHRDDLWTPETVGRNAAEKTISRLDAQKLKTGKYPVM 244
Query: 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFD 312
F A +A L+ ISG +LYRKS+FL+D LGK++ I E PH+L SS FD
Sbjct: 245 FAADVATGLIGHLVMAISGGNLYRKSSFLLDHLGKQVLPEWFNISERPHVLRGLASSPFD 304
Query: 313 NEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEM 372
+EGV TQ R ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S + N ++M
Sbjct: 305 SEGVYTQDREIITDGVLATYLLTSYAARKMKMDPTGHAGGIHNWYVKS----TGQNFEQM 360
Query: 373 LKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIV 432
LK++ TGLLVTE MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MF QIV
Sbjct: 361 LKELGTGLLVTETMGQGVNVVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFNQIV 420
Query: 433 AIGSDVLTRNSNTSGSILIENMIIAGK 459
A+GSDV TR+ +GSIL++ M +AG+
Sbjct: 421 AVGSDVETRSQIQTGSILLDTMKVAGE 447
>gi|385869896|gb|AFI88416.1| PmbA protein [Pectobacterium sp. SCC3193]
Length = 446
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/429 (38%), Positives = 255/429 (59%), Gaps = 8/429 (1%)
Query: 31 KIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFC 90
+ G+ + + ++ G SV R G ++ +E N+D + + +Y Q K G++S++D
Sbjct: 26 RAGSDAAEVAVSKTTGISVSTRYGDVENVEFNSDGALGITVYHQQRK----GSASSTDLS 81
Query: 91 KKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCE 150
++ T+ AA +IAR+T+ D FAG D + L + D L+ P L D +A R E
Sbjct: 82 PDAIARTVQAALDIARYTSVDPFAGPADRDLLAFDAPDLDLFHPTELDADRGIELAARAE 141
Query: 151 NEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDN 210
A + I N E + + NSHG + Y S+H +S IA +M+RD
Sbjct: 142 QAALQADKRITNTEGGSFNSHYGVKVFGNSHGLLKSYCSSRHSMSSCVIAEVNGDMERDY 201
Query: 211 WYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLIS 270
Y+ + L PE +G A+RT+SRL +K+ T + PV+F A +A L IS
Sbjct: 202 AYTVGRALEDLLSPEWVGEECARRTLSRLSPRKLPTMQAPVMFSAEVATGLFGHLVGAIS 261
Query: 271 GNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQ 330
G S+YRKSTFL+D LG++I + I E PH+L S+ FD+EGV+TQ R +V G++Q
Sbjct: 262 GGSVYRKSTFLLDQLGQQILPEWLTIEELPHLLKGLASTPFDSEGVRTQAREIVTAGVLQ 321
Query: 331 GYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGI 390
+ +++YSA+KLGM++TG++GG H+ I + MLK+M GLLVTELMG G+
Sbjct: 322 TWLMTSYSARKLGMQSTGHAGGIHNWRIAGQGL----DFNGMLKQMGKGLLVTELMGQGV 377
Query: 391 NYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSIL 450
+ +TGDYS+GA G+W+ENG+IQY V EITI+G L++M + IV +G+D+ TR++ GS+L
Sbjct: 378 SGVTGDYSRGASGFWVENGEIQYPVSEITIAGNLKDMLRNIVTVGNDIETRSNIQCGSVL 437
Query: 451 IENMIIAGK 459
+ M IAG+
Sbjct: 438 LPEMKIAGE 446
>gi|56459501|ref|YP_154782.1| hypothetical protein IL0390 [Idiomarina loihiensis L2TR]
gi|56178511|gb|AAV81233.1| Predicted inactivated Zn-dependent protease [Idiomarina loihiensis
L2TR]
Length = 448
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/455 (38%), Positives = 267/455 (58%), Gaps = 8/455 (1%)
Query: 4 LIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNN 63
+I S + + ++ L A+ G S + + +G SV R G+++ +E N
Sbjct: 1 MIVQLSDLQVQMKQVESAVKEALRLAEAKGVSSAECSISHSSGISVGTRLGEVETVEFNQ 60
Query: 64 DKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLE 123
D + + +Y + K G++ST+D ++++ ++ A +IARFT+ D + GL +
Sbjct: 61 DGALGISVYRGNQK----GSASTTDLSEQAISAAVDKACDIARFTSPDPYNGLAPAELMA 116
Query: 124 MNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGF 183
+ D L P S + A A CE A N + IVN++ + + NSHGF
Sbjct: 117 TDVPDLDLCHPGDQSAEYAIKQALACEKHALNLDERIVNSDGAHYGSHTGFRVYGNSHGF 176
Query: 184 MSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKK 243
+ GY S+H +S IA +G +MQRD YS +L E + AA T+SRL A+K
Sbjct: 177 IGGYLQSRHNLSCVLIAKEGDKMQRDMSYSVARKMHELKSAESVAEEAAAETLSRLGARK 236
Query: 244 ISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHIL 303
+ T K PV+F A +A L ISG +LYRKS+FL+D LGK + + I E PHI+
Sbjct: 237 VPTAKVPVIFRADVAGSLFGHMVSAISGGNLYRKSSFLLDHLGKPVLPEWLSIQEKPHII 296
Query: 304 GSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKT 363
G SS FD EG+ T+ R ++ +G++Q Y L++Y+A+KL M+ TG++GG H+ + T
Sbjct: 297 GGLASSPFDAEGLATKDREIITDGVLQTYLLTSYAARKLDMQPTGHAGGIHNWRV----T 352
Query: 364 KSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGK 423
+ ++L ++ KKM TGLLVTELMG G+N + GDYS+GA G+W+ENG+IQY VEE+TI+G
Sbjct: 353 QQDNSLAQLCKKMGTGLLVTELMGQGVNMVNGDYSRGAAGFWVENGEIQYPVEEVTIAGN 412
Query: 424 LQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
L++M IVAIG+D R++ +GS+L+E M IAG
Sbjct: 413 LKDMLANIVAIGNDTDERHALHTGSVLLEQMSIAG 447
>gi|261819629|ref|YP_003257735.1| peptidase PmbA [Pectobacterium wasabiae WPP163]
gi|421082706|ref|ZP_15543588.1| Peptidase PmbA [Pectobacterium wasabiae CFBP 3304]
gi|261603642|gb|ACX86128.1| peptidase U62 modulator of DNA gyrase [Pectobacterium wasabiae
WPP163]
gi|401702550|gb|EJS92791.1| Peptidase PmbA [Pectobacterium wasabiae CFBP 3304]
Length = 446
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/429 (38%), Positives = 255/429 (59%), Gaps = 8/429 (1%)
Query: 31 KIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFC 90
+ G+ + + ++ G SV R G ++ +E N+D + + +Y Q K G++S++D
Sbjct: 26 RAGSDAAEVAVSKTTGISVSTRYGDVENVEFNSDGALGITVYHQQRK----GSASSTDLS 81
Query: 91 KKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCE 150
++ T+ AA +IAR+T+ D FAG D + L + D L+ P L D +A R E
Sbjct: 82 PDAIARTVQAALDIARYTSVDPFAGPADRDLLAFDAPDLDLFHPTELDADRGIELAARAE 141
Query: 151 NEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDN 210
A + I N E + + NSHG + Y S+H +S IA +M+RD
Sbjct: 142 QAALQADKRITNTEGGSFNSHYGVKVFGNSHGLLKSYCSSRHSMSSCVIAEVNGDMERDY 201
Query: 211 WYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLIS 270
Y+ + L PE +G A+RT+SRL +K+ T + PV+F A +A L IS
Sbjct: 202 AYTVGRALEDLLSPEWVGEECARRTLSRLSPRKLPTMQAPVMFSAEVATGLFGHLVGAIS 261
Query: 271 GNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQ 330
G S+YRKSTFL+D LG++I + I E PH+L S+ FD+EGV+TQ R +V G++Q
Sbjct: 262 GGSVYRKSTFLLDKLGQQILPEWLTIEELPHLLKGLASTPFDSEGVRTQAREIVTAGVLQ 321
Query: 331 GYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGI 390
+ +++YSA+KLGM++TG++GG H+ I + MLK+M GLLVTELMG G+
Sbjct: 322 TWLMTSYSARKLGMQSTGHAGGIHNWRIAGQGL----DFNGMLKQMGKGLLVTELMGQGV 377
Query: 391 NYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSIL 450
+ +TGDYS+GA G+W+ENG+IQY V EITI+G L++M + IV +G+D+ TR++ GS+L
Sbjct: 378 SGVTGDYSRGASGFWVENGEIQYPVSEITIAGNLKDMLRNIVTVGNDIETRSNIQCGSVL 437
Query: 451 IENMIIAGK 459
+ M IAG+
Sbjct: 438 LPEMKIAGE 446
>gi|123443970|ref|YP_001007940.1| peptidase PmbA [Yersinia enterocolitica subsp. enterocolitica 8081]
gi|122090931|emb|CAL13813.1| Putative modulator of DNA gyrase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 446
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/455 (38%), Positives = 272/455 (59%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K ++ + +Q L A+ G+ + + ++ G SV R G+++ +E N+D
Sbjct: 1 MKVVTQVAEQRKTLEQAVAQALELARA-GSDAAEVAVSKTTGISVSTRFGEVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q K G++ST+D ++ T+ AA +IAR+T+ D +AG +++ L
Sbjct: 60 GALGITVYHQQRK----GSASTTDLNPDAVARTVQAALDIARYTSPDPYAGPAEKSLLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
+ D L+ P L + L+A R E A + I N E + + NSHG +
Sbjct: 116 DAPDLDLFHPSDLDAEQGILLAARAEQAALQADKRITNTEGGSFNSHYGIKVFGNSHGML 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S+H +S S IA +M+RD Y+ + L PE +G A+RT+SRL +K+
Sbjct: 176 QSYCSSRHSLSSSVIAEHNGDMERDYAYTIGRRMEDLASPEWVGEECARRTLSRLSPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
T + PVLF A +A L ISG ++YRKSTFL+D LGK+I + I E PH+LG
Sbjct: 236 PTMQSPVLFAAEVATGLFGHLVSAISGGNIYRKSTFLLDHLGKQILPEWLTIEEHPHLLG 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+T +R +VK+G++Q Y L++YSA+KLG+ +TG++GG H+ +
Sbjct: 296 GLASTPFDSEGVRTLQREIVKDGVLQTYLLTSYSARKLGLHSTGHAGGIHNWRVAGQ--- 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ MLK+++ GL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L
Sbjct: 353 -GQDFAGMLKQLDKGLVVTELMGQGVSTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M + IV+IGSD+ TR++ GSIL+ M IAG+
Sbjct: 412 KDMLRNIVSIGSDIETRSNIQCGSILLPAMKIAGE 446
>gi|423201483|ref|ZP_17188063.1| hypothetical protein HMPREF1167_01646 [Aeromonas veronii AER39]
gi|404616840|gb|EKB13782.1| hypothetical protein HMPREF1167_01646 [Aeromonas veronii AER39]
Length = 447
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 180/443 (40%), Positives = 266/443 (60%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ + + + L AK +GAS + + ++ G SV R +++ IE N D + + +Y +D
Sbjct: 12 AHLEAVVAEALEIAKGLGASLAEVSISKQTGLSVNTRGCELESIEFNKDGALGIAVY-RD 70
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
G K G+SST+D K ++ + AA IAR T++D+ AGL D L + D +L
Sbjct: 71 GCK---GSSSTTDLSKPAIRAAVEAAIEIARHTSADDCAGLADAELLAWDAPDLQLCHQI 127
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L +A CE A ++ I +++ G ++ + NSHGF+ GY S++ +S
Sbjct: 128 ELDPQRGIELAIECERLALGRDARIKHSDGAGFSSHLGIKVYGNSHGFVKGYAASRNSLS 187
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD YSS+ L P+ I A +RT+SRL A+KISTR PVLF
Sbjct: 188 CVLIGEQDGDMQRDYGYSSSRTLDGLWSPQRIADEAVERTVSRLGARKISTRHAPVLFHP 247
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
A L ISG +LYRKS+FL+D LGK+I + I E PH+LG S+ FD EG
Sbjct: 248 DTASGLWGHLVMAISGGNLYRKSSFLLDKLGKQILPEWLTIQEFPHLLGGLASTPFDGEG 307
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T+ +++NG + + L++YSA+KLG+ TTG++GG H+ + + + + + MLK+
Sbjct: 308 VRTRDMDIIRNGELMSWLLTSYSARKLGLTTTGHAGGIHNWQV----SNTGQDFQGMLKE 363
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGLLVTELMG G+N + GDYS+GA G+W+ENG+I Y VEEITI+G L MF IVA+G
Sbjct: 364 MGTGLLVTELMGQGVNIVNGDYSRGAAGFWVENGEIAYPVEEITIAGNLAEMFSHIVAVG 423
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
D R+S +GS+L+ENM +AG
Sbjct: 424 CDEDERSSLKTGSVLVENMKLAG 446
>gi|322514497|ref|ZP_08067534.1| peptide maturation protein PmbA [Actinobacillus ureae ATCC 25976]
gi|322119567|gb|EFX91645.1| peptide maturation protein PmbA [Actinobacillus ureae ATCC 25976]
Length = 449
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 176/445 (39%), Positives = 277/445 (62%), Gaps = 8/445 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + LN+AKK GA + + + G SV R + + IE NND ++ + +Y+
Sbjct: 13 EQELRQAVEFALNFAKKSGA-EAEVGVTKVAGLSVSTRLEQTENIEFNNDGSLGISVYV- 70
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
GK+ GN+STSD +S+ + +A IA++T+ D AGL D+ + + D +LY
Sbjct: 71 -GKRK--GNASTSDLQPQSIQRAVESALAIAKYTSEDECAGLADKEMMAFDAPDLELYHQ 127
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+S++ A +A E+ A N + IVN+E + + N+HG + Y S++ +
Sbjct: 128 ADISVEQAVELALEAEHHALNADEKIVNSEGATFNSHSGVRVYGNTHGMLQSYLSSRYSL 187
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S I+ +++RD Y+ + + KL PE +G AA + + RL +KI T + PV+F
Sbjct: 188 SCSVISAYEDQLERDYEYTISREFDKLQSPEWVGRQAAFKAVDRLNPQKIKTCEVPVIFY 247
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L+ A ISG +LYRKS+FL+D LG +I S I E PH+L SS+FD+E
Sbjct: 248 NDVATGLVGHLAGAISGGALYRKSSFLLDKLGTQILPSWFAISERPHLLRQLASSAFDSE 307
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV TQ R ++ +G++Q Y +++YSA+K+G+KTTG++GG H+ ++ N+T D L LK
Sbjct: 308 GVITQDREIITDGVLQTYLMTSYSARKMGLKTTGHAGGIHNWLVKPNRTGGLDTL---LK 364
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGLLVTE +G IN +TG+YS+GA G+W+ENG+IQY V EITI+G+LQ M+K +VA+
Sbjct: 365 EMGTGLLVTEFLGSAINAVTGEYSRGAAGFWVENGEIQYPVAEITIAGQLQEMYKNLVAV 424
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
D+ R++ +GSIL++ M I+G+
Sbjct: 425 ADDIEHRSNIQTGSILLDKMKISGE 449
>gi|107099943|ref|ZP_01363861.1| hypothetical protein PaerPA_01000964 [Pseudomonas aeruginosa PACS2]
Length = 438
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/443 (38%), Positives = 269/443 (60%), Gaps = 8/443 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
+ ++ + ++ A++ GAS + + G S VR+G+++ +E N D+ + +Y
Sbjct: 4 DLREQVEQIIAEARRQGASACEVAVSLEQGLSTSVRQGEVETVELNRDQGFGITLYAGQR 63
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS + ++ +T+ AA IAR T+ D AGL D + + LY PW
Sbjct: 64 K----GSASTSATGEAAIRETVAAALAIARHTSEDECAGLADAALMARELPELDLYHPWS 119
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
LS + A A CE AF + + + T + T Q + NSHGF+ GY ++H +S
Sbjct: 120 LSPEQAVERALACEAAAFAADKRVTKADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSC 179
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L E IG AA+R SRL A+ + T + PVLF
Sbjct: 180 VMIAEGEGQMQRDYWYDVNRRGEALASAESIGRRAAERAASRLGARPVQTAEVPVLFAPE 239
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
+A L F ISG SLYRKS+FL +LG+++F + I E PH++G+ GS+SFD++G+
Sbjct: 240 IAVGLFGHFLGAISGGSLYRKSSFLEGALGQRLFPEWLSIDERPHLVGALGSASFDSDGL 299
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+NG + Y L TYS +KLG+ +T N+GG H+L + + ++ ++++M
Sbjct: 300 ATYAKPFVENGELVSYVLGTYSGRKLGLPSTANAGGVHNLFV----SHGDEDQAALIRRM 355
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ+ V+E+TI+ L+++F++IVA+G
Sbjct: 356 GRGLLVTELMGQGVNLVTGDYSRGAAGYWVENGEIQFPVQEVTIAANLRDLFRRIVAVGK 415
Query: 437 DVLTRNSNTSGSILIENMIIAGK 459
D+ R + +GS+L+E+M++AG+
Sbjct: 416 DIERRGNLHTGSVLVESMMVAGR 438
>gi|402699613|ref|ZP_10847592.1| PmbA protein [Pseudomonas fragi A22]
Length = 448
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/441 (38%), Positives = 270/441 (61%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + ++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEQIIAEARRQGASACEVAVSLEQGLSTSVRQREVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS ++ +T+ AA IA+ T+ D +GL D + + + DF ++ W +
Sbjct: 75 ----GSASTSATGPDAIRETVAAALAIAKHTSEDESSGLADASLMARDLKDFDVFHTWDI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF +S I N + T ++T Q + NS+GF+ G +H +S
Sbjct: 131 TPEQAIEKALACEAAAFEADSRIKNADGTTLSTHQGCRVYGNSNGFIGGSASPRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N + L IG AA+R RL ++ + T + PVLF A L
Sbjct: 191 MIAEGDGQMQRDYWYDVNCQGELLMDAATIGKRAAERAARRLGSRPVPTCEVPVLFSAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG +LYRKS+FL+D++G++IF + + E PH++ + GSSSFDN+G+
Sbjct: 251 AGGLFGSFLGAISGGNLYRKSSFLLDAMGQQIFPEWLTLDERPHLMRAMGSSSFDNDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + +K+G + Y LSTYS +KLG+ +T N+GG H+L + T ++ ++++M
Sbjct: 311 TYAKPFIKDGELVSYILSTYSGRKLGLPSTANAGGVHNLFV----THGDEDQAALIRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GL VTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+G+D
Sbjct: 367 RGLFVTELMGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGND 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R++ +GS+LIE M +AG
Sbjct: 427 LELRSNIRTGSVLIERMTVAG 447
>gi|284008679|emb|CBA75328.1| modulator of DNA gyrase [Arsenophonus nasoniae]
Length = 446
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/450 (38%), Positives = 271/450 (60%), Gaps = 9/450 (2%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNV 69
+ + + + ++ + L+YAK+ + + N+ G SV R G+ + IE N+D + +
Sbjct: 6 QVLLQRKQLEETVEYALSYAKE-RCDAAEVAINKSTGISVSTRFGETENIEFNSDGALGI 64
Query: 70 IIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDF 129
+Y K G++S+++ +++ T+ AA NIA++T+ D FAGL D L D
Sbjct: 65 TVY----HKQRKGSASSTNLHPEAIKRTVQAAINIAQYTSEDPFAGLADAELLTYQSPDL 120
Query: 130 KLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPF 189
KL+ P+ + + A +A + E A N + I N E + + N+HG + Y
Sbjct: 121 KLFYPFDIDAEKAIQLASQAEISALNADKRIKNTEGGSFNSHYGIRVYGNTHGMLQSYCS 180
Query: 190 SKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKC 249
S+H +S IA M+RD Y+ + L P+ +G AA+RT++RL K+ST K
Sbjct: 181 SRHSMSSCVIAQADGGMERDYAYTIARRLEDLQSPQWVGQEAARRTVARLSPHKLSTMKT 240
Query: 250 PVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSS 309
PV+F A +A L ISG ++YR+S+FL+DSLGK+IF + + I E+PH +G SS
Sbjct: 241 PVIFAAEVATGLFGHLVGAISGTNIYRRSSFLLDSLGKQIFPAWLTIQENPHRIGGLASS 300
Query: 310 SFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNL 369
FD+EGV T +R +++ GI+Q + L+TYSA+KLG+++TG++GG H+ I +
Sbjct: 301 PFDSEGVNTIQRNIIEQGILQTWLLTTYSARKLGLRSTGHAGGIHNWHIAGQGL----DF 356
Query: 370 KEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFK 429
+LK+M TGL+VTELMG G++ +TGDYS+GA G+W+ENG IQY V EITI+G L+ M+
Sbjct: 357 AALLKEMGTGLVVTELMGQGVSSVTGDYSRGAAGFWVENGVIQYPVSEITIAGNLKQMWA 416
Query: 430 QIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IV IG+D+ TR++ GS+L+ M +AG+
Sbjct: 417 NIVTIGNDIETRSNIQCGSVLLSEMHVAGQ 446
>gi|425064883|ref|ZP_18468003.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Pasteurella multocida subsp. gallicida P1059]
gi|404384598|gb|EJZ81031.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Pasteurella multocida subsp. gallicida P1059]
Length = 451
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 166/433 (38%), Positives = 276/433 (63%), Gaps = 8/433 (1%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
++ A+K GA+ + + + +G SV R +I+ +E ND + + +Y+ + K GN+S
Sbjct: 26 VDMAQKAGAT-AEVAVTKVSGLSVSTRLQEIENVEFTNDGALGISVYLGNQK----GNAS 80
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ +T+ AA +IA++T+ D AGL D + + + D LY + ++ A +
Sbjct: 81 TSDLSPEAIKNTVEAAISIAKYTSPDECAGLADYDLMAFDAPDLALYHAADIDVEKATAL 140
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE 205
A E A +++ IVN+E + + N+HG + Y S++ +S S IA +
Sbjct: 141 ALETEQAALSYDKRIVNSEGAAFNSHTGVRVYGNTHGMLQSYLSSRYSLSCSVIAGVEDQ 200
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
++RD Y+ + D +L+ +G + AK+T+ RL+ +K++T++ PV+F +A L++
Sbjct: 201 LERDYEYTISRDLNQLESASWVGEHCAKKTLFRLQPQKMATQQVPVIFLNDVATGLISHL 260
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
ISG SLYRKS+FL++ LGK++ I E PH++G SS FD+EGV+TQ R ++K
Sbjct: 261 TAAISGGSLYRKSSFLLNHLGKQVLPDWFHISEQPHLIGQLASSPFDSEGVRTQCREIIK 320
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
G +Q Y L++YS KKLGM++TG++GG H+ ++ N T L +L++M TGLLVT+L
Sbjct: 321 QGTLQTYLLTSYSGKKLGMRSTGHAGGIHNWLVKPNTT---GGLTTLLRQMGTGLLVTDL 377
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+L+ M + IVA+G D+ R++
Sbjct: 378 MGQGVNLVTGDYSRGAAGFWVENGEIQYPVAEITIAGQLKEMLRNIVAVGDDIEHRSNIQ 437
Query: 446 SGSILIENMIIAG 458
+GSIL+E++ ++G
Sbjct: 438 TGSILLEHLKVSG 450
>gi|315634790|ref|ZP_07890072.1| peptide maturation protein PmbA [Aggregatibacter segnis ATCC 33393]
gi|315476342|gb|EFU67092.1| peptide maturation protein PmbA [Aggregatibacter segnis ATCC 33393]
Length = 453
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/433 (38%), Positives = 273/433 (63%), Gaps = 8/433 (1%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
+ A+K GA+ + + + +G SV R +I+ +E NND + + +Y+ K GN+S
Sbjct: 28 IEIAQKAGAT-AEVGVTKSSGLSVSTRLQEIENVEFNNDGALGISVYVGQQK----GNAS 82
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ +T+ AA IA++T+ D+ AGL D+ + + D LY + +D A +
Sbjct: 83 TSDLTPEAIKNTVEAALAIAKYTSPDDCAGLADKELMAFDAPDLDLYHAAEIDVDKAVQL 142
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE 205
A E A + IVN+E + NSHG + Y S++ +S S IA ++
Sbjct: 143 ALDTEKAALEHDERIVNSEGASFNAHTGVRVYGNSHGMLQSYLSSRYSLSCSVIAEHQEQ 202
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
++RD Y+ + +L P +G AA++ I+RL+ +K++T++ PV+F +A L++
Sbjct: 203 LERDYEYTVARNINQLAPPHWVGENAAQKAIARLQPQKLATQEAPVIFLNDVATGLISHL 262
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
A ISG SLYRK++FL+D LGK++ +I E PH++G S+ FD+EGV+TQ +++
Sbjct: 263 AAAISGGSLYRKASFLLDHLGKQVLPDWFEIAERPHLIGQLASTPFDSEGVRTQDMEIIR 322
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
+GI+Q Y L++YS +KL M++TG++GG H+ +I K SS L +L++MN GLLVTE+
Sbjct: 323 SGILQTYLLTSYSGRKLDMQSTGHAGGIHNWLI---KPNSSGKLTALLRQMNRGLLVTEV 379
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+L ++ + IVA+ D+ R++
Sbjct: 380 MGQGVNLVTGDYSRGAAGFWVENGEIQYPVAEITIAGQLPDILRNIVAVADDIEHRSNIQ 439
Query: 446 SGSILIENMIIAG 458
+GSIL+E M I+G
Sbjct: 440 TGSILLEKMKISG 452
>gi|260770972|ref|ZP_05879901.1| PmbA protein [Vibrio furnissii CIP 102972]
gi|375129846|ref|YP_004991944.1| PmbA protein [Vibrio furnissii NCTC 11218]
gi|260614209|gb|EEX39399.1| PmbA protein [Vibrio furnissii CIP 102972]
gi|315179018|gb|ADT85932.1| PmbA protein [Vibrio furnissii NCTC 11218]
Length = 447
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 172/454 (37%), Positives = 267/454 (58%), Gaps = 12/454 (2%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
R + ++E + L+ A GA + + + G SV R +++ +E N+D +
Sbjct: 4 RQQVAVQRTELEAAVAKALDMASA-GADAAEVAITKSTGLSVSTRMCEVENVEFNSDGAL 62
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
+ +Y + G++STSD +K++ T+ AA +IA++T+ D +AG + +
Sbjct: 63 GITVY----RGQRKGSASTSDLSEKAIQQTVLAALDIAQYTSEDPYAGPAPKELMVTEIP 118
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ P + D A +A E A ++ I ++ + + NSHG ++ Y
Sbjct: 119 DLDLFHPDEPNPDRAAQVAIEAERAALQYSDKIKQSDGGSYDSHYGVKVYGNSHGLLASY 178
Query: 188 PFSKHIISISPIAIKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
S+ IS I +GK EM+RD Y+ L PE +G AA++TISRL AKK+
Sbjct: 179 ASSRQSISCCVIG-QGKNGEMERDYSYTVARHVDDLWAPERVGLEAAEKTISRLDAKKLK 237
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
T K PV+F A +A L+ ISG +LYRKS+FL+D LG++I S + E PH+L
Sbjct: 238 TGKYPVMFAADVATGLMGHLVMAISGGNLYRKSSFLLDHLGQQILPSWFNVSERPHVLRG 297
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
SS FD+EGV+T+ R ++ +G++ Y L++Y+A+K+ M TG++GG H+ + +
Sbjct: 298 LASSPFDSEGVRTEDRDIITDGVLATYLLTSYAARKMNMTPTGHAGGIHNWFV----QHT 353
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
N ++MLK + TGLLVTE+MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L+
Sbjct: 354 GQNFEQMLKALGTGLLVTEVMGQGVNVVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLK 413
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
MF QIVA+GSD TR+ +GSIL+E M +AG+
Sbjct: 414 TMFNQIVAVGSDTETRSQIQTGSILLETMKVAGE 447
>gi|441503384|ref|ZP_20985390.1| TldE/PmbA protein [Photobacterium sp. AK15]
gi|441428882|gb|ELR66338.1| TldE/PmbA protein [Photobacterium sp. AK15]
Length = 447
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 169/454 (37%), Positives = 271/454 (59%), Gaps = 12/454 (2%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
R + + E + L A K A + + N+ G SV R ++ +E N+D +
Sbjct: 4 REQVAQQRVELEAAVARALELAGK-QADAAEVAINKTTGISVSTRMCDVENVEFNSDGAL 62
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
+ +Y + G++STSD + ++ T+ AA +IAR+T+ D +AG +
Sbjct: 63 GITVY----RGQRKGSASTSDLSENAIAQTVAAALDIARYTSEDPYAGPGPAELMAREVP 118
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ P D A IA R E A + + I ++ + + NSHG ++ Y
Sbjct: 119 DLDLFHPDEPEPDRAASIAARAEQAALDADPRIKQSDGASYDSHYGIRVYGNSHGMLASY 178
Query: 188 PFSKHIISISPIAIKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
S+H S IA +GK EM+RD Y+S L PE +G +AA+RT+ R+ +K++
Sbjct: 179 ASSRHSTSCCVIA-EGKNGEMERDYSYTSARRVTDLWTPEKVGQHAAERTVGRIDPQKLT 237
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
TR+ P++F A +A L ISG++LYRKS+FL+D LG++IF + I E PHIL
Sbjct: 238 TREAPIMFAADIATGLFGHLVMGISGSNLYRKSSFLLDKLGEQIFPDWLDISERPHILRG 297
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
S+ FD+EG+ T R ++++G++Q Y +++Y+A+KLG + TG++GG H+ ++ +
Sbjct: 298 MASTPFDSEGLATHDREIIQSGVLQTYLMTSYAARKLGRQPTGHAGGIHNWLV----KPT 353
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
++ ++MLKKM+ GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V E+TI+G L+
Sbjct: 354 GESYEQMLKKMDRGLLVTELMGQGVNIVTGDYSRGAAGFWVENGEIQFPVSEVTIAGNLK 413
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+M + IVAIG+D TR+ +GS+L++ M IAG+
Sbjct: 414 DMMQNIVAIGTDTETRSQIQTGSVLLDTMKIAGE 447
>gi|387890801|ref|YP_006321099.1| protein PmbA [Escherichia blattae DSM 4481]
gi|414594085|ref|ZP_11443725.1| PmbA protein [Escherichia blattae NBRC 105725]
gi|386925634|gb|AFJ48588.1| protein PmbA [Escherichia blattae DSM 4481]
gi|403195009|dbj|GAB81377.1| PmbA protein [Escherichia blattae NBRC 105725]
Length = 446
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 164/426 (38%), Positives = 260/426 (61%), Gaps = 8/426 (1%)
Query: 34 ASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKS 93
A + + + G SV R G+++ +E N+D + + +Y Q+ K G++S++D ++
Sbjct: 29 ADGAEVAVTKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPEA 84
Query: 94 LYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEA 153
+ T+ AA +IAR+T+ D AG+ D++ L D L+ P + D A +A R E +
Sbjct: 85 IARTVQAALDIARYTSEDPCAGVADKDLLAYEAPDLDLFHPQEVDADRAIELASRAEQAS 144
Query: 154 FNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYS 213
+ I N E + + NSHG + Y ++H +S I + M+RD Y+
Sbjct: 145 LKADKRITNTEGGSFNSHYGIKVFGNSHGMLQSYCSTRHSLSSCVIGEENGSMERDYAYT 204
Query: 214 SNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNS 273
+ + L PE +G A+RT++RL +K++T K PV+F A A L I+G +
Sbjct: 205 ISRTMEGLKSPEWVGEECARRTLARLAPRKLATMKAPVIFAAEAATGLFGHLVGAIAGGA 264
Query: 274 LYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYF 333
+YRKSTFL+D+LG++I + I E PHIL S+ FD+EGV+T++R +VK+GI++ +
Sbjct: 265 VYRKSTFLLDALGQQILPDWLTIEEHPHILQGLASTPFDSEGVRTERRDIVKDGILRQWL 324
Query: 334 LSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYI 393
L++YSA+KLG+K+TG++GG H+ I + MLK+M TGL+VTELMG G++ I
Sbjct: 325 LTSYSARKLGLKSTGHAGGIHNWRIAGRGL----DFDGMLKEMGTGLVVTELMGQGVSGI 380
Query: 394 TGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIEN 453
TGDYS+GA G+W+ENG+IQY V EITI+G L++M++ IV G D+ TR++ GS+L+
Sbjct: 381 TGDYSRGASGFWVENGQIQYPVSEITIAGNLKDMWRNIVTTGDDIETRSNIQCGSVLLPE 440
Query: 454 MIIAGK 459
M IAG+
Sbjct: 441 MKIAGQ 446
>gi|410611456|ref|ZP_11322554.1| PmbA protein [Glaciecola psychrophila 170]
gi|410168874|dbj|GAC36443.1| PmbA protein [Glaciecola psychrophila 170]
Length = 441
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 179/444 (40%), Positives = 260/444 (58%), Gaps = 8/444 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+E Q + +D+L AK GA+ + ++ G +V R +++ +E ND + + +Y
Sbjct: 6 AEIQSIVEDVLKLAKDKGATQAEASMSKVEGIAVSSRLKQVETVEFTNDGGLGITVY--H 63
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
GKK G++ST+D +L T+ A IA+ T D+ +GL ++ + + D L+ P
Sbjct: 64 GKK--RGSASTADLSPAALKLTVEKAIEIAKHTGEDDCSGLAEKELMAFDFPDLDLFHPI 121
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L + A E A N + I N++ + NSHG ++GY S++ +S
Sbjct: 122 ELDTEYAIQQVIAAETSALNVDPRITNSDGASYNANLGTKVYGNSHGLIAGYNSSRYSMS 181
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD YS + L PE +G AA+ T+ RL A+K+ T K PVLF+
Sbjct: 182 CVVIGEQDGDMQRDYSYSVGREVGMLSSPEQLGLEAAQFTLGRLGARKVKTCKVPVLFDR 241
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L F ISG ++YRKS+FL+D L +++ + I E PHIL SS FD+EG
Sbjct: 242 EIASGLFGHFISAISGGNVYRKSSFLLDKLNQQVLPDWLNISERPHILKGLASSPFDHEG 301
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
VKTQ VV NG++ Y L++YSA+KL M+TTG++GG H+ I + D KEML K
Sbjct: 302 VKTQDMDVVSNGLLNHYLLTSYSARKLKMQTTGHAGGIHNWFI----QHTGDTDKEMLAK 357
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
+ TGLLVTELMG G+N +TGDYS+GA G+W+ENG IQY V EITI+G L +M IVAIG
Sbjct: 358 LGTGLLVTELMGQGVNIVTGDYSRGAAGFWVENGVIQYPVHEITIAGNLADMLMNIVAIG 417
Query: 436 SDVLTRNSNTSGSILIENMIIAGK 459
+ TR S +GS+LI+ M IAG+
Sbjct: 418 AVQETRGSIQTGSVLIDKMQIAGE 441
>gi|156975905|ref|YP_001446812.1| peptidase PmbA [Vibrio harveyi ATCC BAA-1116]
gi|156527499|gb|ABU72585.1| hypothetical protein VIBHAR_03671 [Vibrio harveyi ATCC BAA-1116]
Length = 447
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 174/447 (38%), Positives = 266/447 (59%), Gaps = 12/447 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
++E +Q L A + + + + G SV R G ++ +E N+D + + +Y
Sbjct: 11 RTELEQAVSRALEIAAA-KSDAAEVAITKSTGLSVSTRMGDVENVEFNSDGALGITVY-- 67
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYT 133
+ G++STSD + ++ T+ AA +IAR+T+ D FAG P E ++ P D L+
Sbjct: 68 --RGQRKGSASTSDLSEVAIEQTVLAALDIARYTSEDRFAGPAPKEYMVKEVP-DLDLFH 124
Query: 134 PWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHI 193
P D A +A E EA N++ I ++ + + NSHG ++ Y S+H
Sbjct: 125 PDAPDPDYAAQVAIAAEKEALNYSDAIKQSDGASYDSHYGVKVYGNSHGLLASYASSRHS 184
Query: 194 ISISPIAI-KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252
S I + + EM+RD Y+ L PE +G AA++TISRL A+K+ T K PV+
Sbjct: 185 TSCCVIGVGQNGEMERDYSYTVARHRDDLWTPETVGRNAAEKTISRLDAQKLKTGKYPVM 244
Query: 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFD 312
F A +A L+ ISG +LYRKS+FL+D LGK++ I E PH+L SS FD
Sbjct: 245 FAADVATGLIGHLVMAISGGNLYRKSSFLLDHLGKQVLPEWFNISERPHVLRGLASSPFD 304
Query: 313 NEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEM 372
+EGV TQ R ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S + N ++M
Sbjct: 305 SEGVYTQDREIITDGVLATYLLTSYAARKMKMDPTGHAGGIHNWYVKS----TGQNFEQM 360
Query: 373 LKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIV 432
LK++ TGLLVTE MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MF QIV
Sbjct: 361 LKELGTGLLVTETMGQGVNVVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFNQIV 420
Query: 433 AIGSDVLTRNSNTSGSILIENMIIAGK 459
A+G+DV T + +GSIL++ M +AG+
Sbjct: 421 AVGTDVETHSQIQTGSILLDTMKVAGE 447
>gi|330827992|ref|YP_004390944.1| Modulator of DNA gyrase PmbA [Aeromonas veronii B565]
gi|423211319|ref|ZP_17197872.1| hypothetical protein HMPREF1169_03390 [Aeromonas veronii AER397]
gi|328803128|gb|AEB48327.1| Modulator of DNA gyrase PmbA [Aeromonas veronii B565]
gi|404613914|gb|EKB10927.1| hypothetical protein HMPREF1169_03390 [Aeromonas veronii AER397]
Length = 447
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 180/443 (40%), Positives = 266/443 (60%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ + + + L AK +GAS + + ++ G SV R +++ IE N D + + +Y +D
Sbjct: 12 AHLEAVVAEALEIAKGLGASLAEVSISKQTGLSVNTRGCELESIEFNKDGALGIAVY-RD 70
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
G K G+SST+D K ++ + AA IAR T++D+ AGL D L + D +L
Sbjct: 71 GCK---GSSSTTDLSKPAIRAAVEAAIEIARHTSADDCAGLADAELLAWDAPDLQLCHQI 127
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L +A CE A ++ I +++ G ++ + NSHGF+ GY S++ +S
Sbjct: 128 ELDPQRGIELAIECERLALGRDARIKHSDGAGFSSHLGIKVYGNSHGFVKGYAASRNSLS 187
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD YSS+ L P+ I A +RT+SRL A+KISTR PVLF
Sbjct: 188 CVLIGEQDGDMQRDYGYSSSRTLDGLWSPQRIADEAVERTVSRLGARKISTRHAPVLFHP 247
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
A L ISG +LYRKS+FL+D LGK+I + I E PH+LG S+ FD EG
Sbjct: 248 DTASGLWGHLVMAISGGNLYRKSSFLLDKLGKQILPEWLTIQEFPHLLGGLASTPFDGEG 307
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T+ +++NG + + L++YSA+KLG+ TTG++GG H+ + + + + + MLK+
Sbjct: 308 VRTRDMDIIRNGELVSWLLTSYSARKLGLTTTGHAGGIHNWQV----SNTGQDFQGMLKE 363
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGLLVTELMG G+N + GDYS+GA G+W+ENG+I Y VEEITI+G L MF IVA+G
Sbjct: 364 MGTGLLVTELMGQGVNIVNGDYSRGAAGFWVENGEIAYPVEEITIAGNLAEMFSHIVAVG 423
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
D R+S +GS+L+ENM +AG
Sbjct: 424 RDEDERSSLKTGSVLVENMKLAG 446
>gi|381395196|ref|ZP_09920901.1| PmbA protein [Glaciecola punicea DSM 14233 = ACAM 611]
gi|379329097|dbj|GAB56034.1| PmbA protein [Glaciecola punicea DSM 14233 = ACAM 611]
Length = 443
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 174/443 (39%), Positives = 267/443 (60%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
S+ Q + + L +AKK+GA+ + ++ G +V R +I+ +E ND + + +++ +
Sbjct: 8 SDIQNIVDETLTFAKKLGATAAEASMSKIQGIAVGTRLREIETLEFTNDGGLGIAVFVGN 67
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
K G++ST+D ++L + A IA++T D+ AG+ D + + + D LY P
Sbjct: 68 KK----GSASTADLSPQALKLAVTKAIEIAKYTNEDSCAGVADADLIASDFPDLDLYHPQ 123
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L + A A E ++ LIVN++ + N+ G +GY S+ +S
Sbjct: 124 PLDAEFALAQALASETAGLEYSDLIVNSDGASYNANIGVRVYGNTQGINAGYASSRFSLS 183
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
IA + ++MQR+ Y+ + D KLD P IG AAK T+SRL A+K+ T K PV+F
Sbjct: 184 CVLIAQQQQDMQRNYAYTVSRDANKLDTPVNIGIEAAKETLSRLGAQKLGTTKAPVIFHR 243
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L ISG SLYRKS+F++DSLG+ IF + + I E P++ S+SFDNEG
Sbjct: 244 GIASGLFGHLVAAISGGSLYRKSSFMLDSLGETIFPTWLSINEVPYLKQGLASASFDNEG 303
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T +VK+G + Y L++YSA+KLG+++ G++GG H+ I+ + T SD +E+L+
Sbjct: 304 VQTHDMDIVKDGALANYLLTSYSARKLGLRSNGHAGGIHNCIV--SDTGHSD--EELLRT 359
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGLLVTELMG G+N + GDYS+GA G+W+ENG IQY V EITI+G L++MF I AIG
Sbjct: 360 MGTGLLVTELMGQGVNIVNGDYSRGAAGFWVENGVIQYPVHEITIAGNLRDMFANIAAIG 419
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
+ R S +GS+L+ +M IAG
Sbjct: 420 AQREVRGSLQTGSVLVSDMQIAG 442
>gi|303251479|ref|ZP_07337655.1| antibiotic maturation factor PmbA [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307252285|ref|ZP_07534182.1| Protein pmbA [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|302649711|gb|EFL79891.1| antibiotic maturation factor PmbA [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306860207|gb|EFM92223.1| Protein pmbA [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
Length = 449
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 177/445 (39%), Positives = 278/445 (62%), Gaps = 8/445 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + LN+AKK GA + + + G SV R + + IE NND ++ + +YI
Sbjct: 13 EQELRQAVEFALNFAKKSGA-EAEVGVTKVAGLSVSTRLEQTENIEFNNDGSLGISVYI- 70
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
GK+ GN+STSD +S+ T+ +A IA++T+ D AGL D+ + D +LY
Sbjct: 71 -GKRK--GNASTSDLQPQSIQRTVESALAIAKYTSEDECAGLADKEMMAFEAPDLELYHQ 127
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+SI+ A +A E+ A N + IVN+E + + N+HG + Y S++ +
Sbjct: 128 ADISIEQAVELALEAEHHALNADEKIVNSEGATFNSHSGVRVYGNTHGMLQSYLSSRYSL 187
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S I+ +++RD Y+ + + KL P+ IG AA + + RL +KI T + PV+F
Sbjct: 188 SCSVISAYEDQLERDYEYTISREFDKLQSPKWIGRQAAFKAVDRLNPQKIKTCEVPVIFY 247
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L+ A +ISG +LYRKS+FL+D LG +I S I E PH+L SS+FD+E
Sbjct: 248 NDVATGLIGHLAGVISGGALYRKSSFLLDKLGTQILPSWFAISERPHLLRQLASSAFDSE 307
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV TQ R ++ +G++Q Y +++YSA+K+G+KTTG++GG H+ ++ N+T D L LK
Sbjct: 308 GVITQDREIITDGVLQTYLMTSYSARKMGLKTTGHAGGIHNWLVKPNRTGGLDTL---LK 364
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M +GLLVTE +G IN +TG+YS+GA G+W+ENG+IQY V EITI+G+LQ M+K ++A+
Sbjct: 365 EMGSGLLVTEFLGSAINAVTGEYSRGAAGFWVENGEIQYPVAEITIAGQLQEMYKNLIAV 424
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
D+ R++ +GSIL++ M I+G+
Sbjct: 425 ADDIEHRSNIQTGSILLDKMKISGE 449
>gi|444428377|ref|ZP_21223713.1| peptidase PmbA [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444238403|gb|ELU50011.1| peptidase PmbA [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 447
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 174/447 (38%), Positives = 267/447 (59%), Gaps = 12/447 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
++E +Q L A + + + + G SV R G ++ +E N+D + + +Y
Sbjct: 11 RTELEQAVSRALEIAAA-KSDAAEVAITKSTGLSVSTRMGDVENVEFNSDGALGITVY-- 67
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYT 133
+ G++STSD + ++ T+ AA +IA++T+ D FAG P E ++ P D L+
Sbjct: 68 --RGQRKGSASTSDLSEAAIEQTVLAALDIAQYTSEDPFAGPAPKEYMVKEVP-DLDLFH 124
Query: 134 PWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHI 193
P D A +A E EA N++ I ++ + + NSHG ++ Y S+H
Sbjct: 125 PDAPDPDYAAQVAIAAEKEALNYSDAIKQSDGASYDSHYGVKVYGNSHGLLASYASSRHS 184
Query: 194 ISISPIAI-KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252
S I + + EM+RD Y+ L PE +G AA++TISRL A+K+ T K PV+
Sbjct: 185 TSCCVIGVGQNGEMERDYSYTVARHRDDLWTPETVGRNAAEKTISRLDAQKLKTGKYPVM 244
Query: 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFD 312
F A +A L+ ISG +LYRKS+FL+D LGK++ I E PH+L SS FD
Sbjct: 245 FAADVATGLIGHLVMAISGGNLYRKSSFLLDHLGKQVLPEWFNISERPHVLRGLASSPFD 304
Query: 313 NEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEM 372
+EGV TQ R ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S + N ++M
Sbjct: 305 SEGVYTQDREIITDGVLATYLLTSYAARKMKMDPTGHAGGIHNWYVKS----TGQNFEQM 360
Query: 373 LKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIV 432
LK++ TGLLVTE MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MF QIV
Sbjct: 361 LKELGTGLLVTETMGQGVNVVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFNQIV 420
Query: 433 AIGSDVLTRNSNTSGSILIENMIIAGK 459
A+GSD+ TR+ +GSIL++ M +AG+
Sbjct: 421 AVGSDLETRSQIQTGSILLDTMKVAGE 447
>gi|383812978|ref|ZP_09968405.1| peptidase PmbA [Serratia sp. M24T3]
gi|383298388|gb|EIC86695.1| peptidase PmbA [Serratia sp. M24T3]
Length = 446
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 171/445 (38%), Positives = 265/445 (59%), Gaps = 9/445 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ +Q L AK G+ + + ++ G + R G+++ +E N+D + + +Y Q
Sbjct: 11 RKTLEQAVAQALELAKA-GSDGAEVAVSKTTGIGISTRFGEVENVEFNSDGALGITVYYQ 69
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K G++S++D ++ T+ AA +IAR+T+ D FAG+ D+ L D L+ P
Sbjct: 70 QRK----GSASSTDLSPDAIARTVQAALDIARYTSPDPFAGVADKELLAFEAPDLDLFHP 125
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
L D +A R E A + I N E + + NSHG + Y ++H +
Sbjct: 126 TELDADRGIELAARAEQAALAADKRITNTEGGSFNSHYGLRVFGNSHGMLQSYCSTRHSL 185
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S IA +M+RD Y+ L PE +G A+RT+SRL +K+ T K PV+F
Sbjct: 186 SASVIAEAAGDMERDYAYTIARSINDLKSPEWVGAECARRTLSRLSPRKLPTMKAPVMFA 245
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
A +A L ISG S+YRKS++L+DSLGK+I I + E PH+L S+ FD+E
Sbjct: 246 AEVATGLFGHLVGAISGGSIYRKSSYLLDSLGKQILPDWITVEEHPHLLQGLASTPFDSE 305
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+T +R +V++G++Q + L++YSA+KLG++TTG++GG H+ I D+ ML+
Sbjct: 306 GVRTHRRNIVEDGVLQTWLLTSYSARKLGLQTTGHAGGIHNWRIAGQ----GDDFNAMLR 361
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
K++ GLLVTELMG ++ ITGDYS+GA G+W+ENG+IQY V EITI+G L++M + +V+I
Sbjct: 362 KLDKGLLVTELMGQAVSGITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMLRNMVSI 421
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
GSD+ TR++ GSI++ M IAG+
Sbjct: 422 GSDIETRSNIQCGSIILPEMKIAGE 446
>gi|304396921|ref|ZP_07378801.1| peptidase U62 modulator of DNA gyrase [Pantoea sp. aB]
gi|304355717|gb|EFM20084.1| peptidase U62 modulator of DNA gyrase [Pantoea sp. aB]
Length = 450
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 167/429 (38%), Positives = 259/429 (60%), Gaps = 8/429 (1%)
Query: 31 KIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFC 90
K+ + + ++ G V R G+++ +E N+D + + +Y Q+ K G++S++D
Sbjct: 30 KVSTDSAEVAVSKTTGIGVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLS 85
Query: 91 KKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCE 150
++ T+ AA +IAR+T+ D FAG D L + D LY PW + D A +A + E
Sbjct: 86 PDAIKRTVQAAIDIARYTSPDPFAGPADAELLAYDAPDLDLYHPWEIDADRAIELAAQAE 145
Query: 151 NEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDN 210
+ + I N E + + NSHG + Y S+H +S S IA + M+RD
Sbjct: 146 QASLRADKRITNTEGGSFNSHVGIKVFGNSHGMLQSYCSSRHSLSSSVIAEQDGNMERDY 205
Query: 211 WYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLIS 270
Y+ + L PE +G A+RT+SRL +K+ T K PV+F + +A L IS
Sbjct: 206 AYTIGRAFEDLKSPEWVGAECARRTLSRLAPRKLPTMKAPVIFASEVATGLFGHLVGAIS 265
Query: 271 GNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQ 330
G S+YRKSTFL+DS+G++I + I E PH+L S+ FD+EGV+TQ R ++K+G++Q
Sbjct: 266 GGSVYRKSTFLLDSMGQQILPEWLTINEQPHLLKGLASTPFDSEGVRTQARDIIKDGVLQ 325
Query: 331 GYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGI 390
+ L++YSA+KLG+ +TG++GG H+ I + E+LK+M TGL+VTELMG G+
Sbjct: 326 TWLLTSYSARKLGLTSTGHAGGIHNWRIAGQ----GHSFDELLKQMGTGLVVTELMGQGV 381
Query: 391 NYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSIL 450
+ ITGDYS+GA G+W+ENG IQY V E+TI+G L+ M++ +V IG D+ TR++ GS+L
Sbjct: 382 SAITGDYSRGAAGFWVENGVIQYPVSEVTIAGNLKEMWRNMVTIGDDIETRSNIQCGSVL 441
Query: 451 IENMIIAGK 459
+ M IAG+
Sbjct: 442 LPEMKIAGQ 450
>gi|423117613|ref|ZP_17105304.1| protein pmbA [Klebsiella oxytoca 10-5245]
gi|376375743|gb|EHS88529.1| protein pmbA [Klebsiella oxytoca 10-5245]
Length = 450
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 169/453 (37%), Positives = 274/453 (60%), Gaps = 11/453 (2%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHS---SIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
K I ++ ++ ++ + A ++ A S + ++ G V R G+++ +E N+D
Sbjct: 6 KVISQVAQQRKTLEEAVTTALELAAGKSDGAEVSVSKTTGIGVSTRYGEVENVEFNSDGA 65
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +Y Q+ K G++S++D +++ T+ AA +IAR+T+ D AG+ D+ L +
Sbjct: 66 LGITVYHQNRK----GSASSTDLSPQAIARTVQAALDIARYTSPDPCAGVADKELLAFDA 121
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D L+ P +S D+A +A R E A + I N E + + NSHG +
Sbjct: 122 PDLDLFHPADVSPDEAIELASRAEQAALKADKRISNTEGGSFNSHYGIKVFGNSHGMLQS 181
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
Y ++H +S IA + +M+RD Y+ L PE +G A+RT+SRL +K+ST
Sbjct: 182 YCSTRHSLSSCVIAEENGDMERDYAYTIGRAIGDLQSPEWVGEECARRTLSRLAPRKLST 241
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
K PV+F +A L I+G S+YRKSTFL+D+LG +I + I E PH+L
Sbjct: 242 MKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFLLDALGTQILPDWLTIEEHPHLLKGL 301
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
S+ FD+EGV+T++R ++K+GI+ + L+ YSA+KLG+K+TG++GG H+ I
Sbjct: 302 ASTPFDSEGVRTERRDIIKDGILTQWLLTNYSARKLGLKSTGHAGGIHNWRINGRGL--- 358
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+ ++LK+M TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L++
Sbjct: 359 -SFAKLLKEMGTGLVVTELMGQGVSGVTGDYSRGASGFWVENGEIQYPVSEITIAGNLKD 417
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ IV IG+D+ TR++ GS+L+ M IAG+
Sbjct: 418 MWRNIVTIGNDIETRSNIQCGSVLLPEMKIAGQ 450
>gi|423111831|ref|ZP_17099525.1| protein pmbA [Klebsiella oxytoca 10-5243]
gi|376375929|gb|EHS88714.1| protein pmbA [Klebsiella oxytoca 10-5243]
Length = 450
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 169/453 (37%), Positives = 273/453 (60%), Gaps = 11/453 (2%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHS---SIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
K I ++ ++ ++ + A ++ A S + ++ G V R G+++ +E N+D
Sbjct: 6 KVISQVAQQRKTLEEAVTTALELAAGKSDGAEVSVSKTTGIGVSTRYGEVENVEFNSDGA 65
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +Y Q+ K G++S++D +++ T+ AA +IAR+T+ D AG+ D+ L +
Sbjct: 66 LGITVYHQNRK----GSASSTDLSPQAIARTVQAALDIARYTSPDPCAGVADKELLAFDA 121
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D L+ P +S D+A +A R E A + I N E + + NSHG +
Sbjct: 122 PDLDLFHPADVSPDEAIELASRAEQAALKADKRISNTEGGSFNSHYGIKVFGNSHGMLQS 181
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
Y ++H +S IA + +M+RD Y+ L PE +G A+RT+SRL +K+ST
Sbjct: 182 YCSTRHSLSSCVIAEENGDMERDYAYTIGRAIGDLQSPEWVGEECARRTLSRLAPRKLST 241
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
K PV+F +A L I+G S+YRKSTFL+D+LG +I + I E PH+L
Sbjct: 242 MKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFLLDALGTQILPDWLTIEEHPHLLKGL 301
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
S+ FD+EGV+T++R ++K+GI+ + L+ YSA+KLG+K+TG++GG H+ I
Sbjct: 302 ASTPFDSEGVRTERRDIIKDGILTQWLLTNYSARKLGLKSTGHAGGIHNWRINGRGL--- 358
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+ ++LK+M TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L++
Sbjct: 359 -SFAKLLKEMGTGLVVTELMGQGVSGVTGDYSRGASGFWVENGEIQYPVSEITIAGNLKD 417
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ IV IG D+ TR++ GS+L+ M IAG+
Sbjct: 418 MWRNIVTIGDDIETRSNIQCGSVLLPEMKIAGQ 450
>gi|406674751|ref|ZP_11081945.1| hypothetical protein HMPREF1170_00153 [Aeromonas veronii AMC35]
gi|404628754|gb|EKB25529.1| hypothetical protein HMPREF1170_00153 [Aeromonas veronii AMC35]
Length = 447
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 180/443 (40%), Positives = 266/443 (60%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ + + + L AK +GAS + + ++ G SV R +++ IE N D + + +Y +D
Sbjct: 12 AHLEAVVAEALEIAKGLGASLAEVSISKQTGLSVNTRGCELESIEFNKDGALGIAVY-RD 70
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
G K G+SST+D K ++ + AA IAR T++D+ AGL D L + D +L
Sbjct: 71 GCK---GSSSTTDLSKPAIRAAVEAAIEIARHTSADDCAGLADAELLAWDAPDLQLCHQI 127
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L +A CE A ++ I +++ G ++ + NSHGF+ GY S++ +S
Sbjct: 128 ELDPQRGIELAIECERFALGRDARIKHSDGAGFSSHLGIKVYGNSHGFVKGYAASRNSLS 187
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD YSS+ L P+ I A +RT+SRL A+KISTR PVLF
Sbjct: 188 CVLIGEQDGDMQRDYGYSSSRTLDGLWSPQRIADEAVERTVSRLGARKISTRHAPVLFHP 247
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
A L ISG +LYRKS+FL+D LGK+I + I E PH+LG S+ FD EG
Sbjct: 248 DTASGLWGHLVMAISGGNLYRKSSFLLDKLGKQILPEWLTIQEFPHLLGGLASTPFDGEG 307
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T+ +++NG + + L++YSA+KLG+ TTG++GG H+ + + + + + MLK+
Sbjct: 308 VRTRDMDIIRNGELMSWLLTSYSARKLGLTTTGHAGGIHNWQV----SNTGQDFQGMLKE 363
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGLLVTELMG G+N + GDYS+GA G+W+ENG+I Y VEEITI+G L MF IVA+G
Sbjct: 364 MGTGLLVTELMGQGVNIVNGDYSRGAAGFWVENGEIAYPVEEITIAGNLAEMFSHIVAVG 423
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
D R+S +GS+L+ENM +AG
Sbjct: 424 RDEDERSSLKTGSVLVENMKLAG 446
>gi|22124091|ref|NP_667514.1| peptidase PmbA [Yersinia pestis KIM10+]
gi|45443582|ref|NP_995121.1| peptidase PmbA [Yersinia pestis biovar Microtus str. 91001]
gi|108809696|ref|YP_653612.1| peptidase PmbA [Yersinia pestis Antiqua]
gi|108813640|ref|YP_649407.1| peptidase PmbA [Yersinia pestis Nepal516]
gi|145597615|ref|YP_001161691.1| peptidase PmbA [Yersinia pestis Pestoides F]
gi|153997373|ref|ZP_02022473.1| Putative modulator of DNA gyrase [Yersinia pestis CA88-4125]
gi|165928311|ref|ZP_02224143.1| pmbA protein [Yersinia pestis biovar Orientalis str. F1991016]
gi|165937483|ref|ZP_02226046.1| pmbA protein [Yersinia pestis biovar Orientalis str. IP275]
gi|166011387|ref|ZP_02232285.1| pmbA protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166212043|ref|ZP_02238078.1| pmbA protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167400640|ref|ZP_02306149.1| pmbA protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167420595|ref|ZP_02312348.1| pmbA protein [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167426752|ref|ZP_02318505.1| pmbA protein [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|218930699|ref|YP_002348574.1| peptidase PmbA [Yersinia pestis CO92]
gi|229836844|ref|ZP_04457009.1| predicted peptidase required for the maturation and secretion of
the antibiotic peptide MccB17 [Yersinia pestis Pestoides
A]
gi|229839258|ref|ZP_04459417.1| predicted peptidase required for the maturation and secretion of
the antibiotic peptide MccB17 [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229899822|ref|ZP_04514963.1| predicted peptidase required for the maturation and secretion of
the antibiotic peptide MccB17 [Yersinia pestis biovar
Orientalis str. India 195]
gi|229904134|ref|ZP_04519245.1| predicted peptidase required for the maturation and secretion of
the antibiotic peptide MccB17 [Yersinia pestis Nepal516]
gi|270488568|ref|ZP_06205642.1| TldD/PmbA family protein [Yersinia pestis KIM D27]
gi|294505283|ref|YP_003569345.1| Putative modulator of DNA gyrase [Yersinia pestis Z176003]
gi|384123750|ref|YP_005506370.1| Putative modulator of DNA gyrase [Yersinia pestis D106004]
gi|384127612|ref|YP_005510226.1| Putative modulator of DNA gyrase [Yersinia pestis D182038]
gi|384138549|ref|YP_005521251.1| peptidase PmbA [Yersinia pestis A1122]
gi|384416637|ref|YP_005625999.1| putative peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|420548874|ref|ZP_15046638.1| protein pmbA [Yersinia pestis PY-01]
gi|420554222|ref|ZP_15051409.1| protein pmbA [Yersinia pestis PY-02]
gi|420559836|ref|ZP_15056285.1| protein pmbA [Yersinia pestis PY-03]
gi|420565214|ref|ZP_15061121.1| protein pmbA [Yersinia pestis PY-04]
gi|420570254|ref|ZP_15065700.1| protein pmbA [Yersinia pestis PY-05]
gi|420575911|ref|ZP_15070817.1| protein pmbA [Yersinia pestis PY-06]
gi|420581219|ref|ZP_15075643.1| protein pmbA [Yersinia pestis PY-07]
gi|420586601|ref|ZP_15080513.1| protein pmbA [Yersinia pestis PY-08]
gi|420591706|ref|ZP_15085107.1| protein pmbA [Yersinia pestis PY-09]
gi|420597074|ref|ZP_15089933.1| protein pmbA [Yersinia pestis PY-10]
gi|420602786|ref|ZP_15095004.1| protein pmbA [Yersinia pestis PY-11]
gi|420608171|ref|ZP_15099892.1| protein pmbA [Yersinia pestis PY-12]
gi|420613568|ref|ZP_15104726.1| protein pmbA [Yersinia pestis PY-13]
gi|420618929|ref|ZP_15109399.1| modulator of DNA gyrase family protein [Yersinia pestis PY-14]
gi|420624227|ref|ZP_15114174.1| protein pmbA [Yersinia pestis PY-15]
gi|420629215|ref|ZP_15118701.1| protein pmbA [Yersinia pestis PY-16]
gi|420634432|ref|ZP_15123375.1| protein pmbA [Yersinia pestis PY-19]
gi|420639653|ref|ZP_15128077.1| protein pmbA [Yersinia pestis PY-25]
gi|420645105|ref|ZP_15133061.1| protein pmbA [Yersinia pestis PY-29]
gi|420650412|ref|ZP_15137845.1| protein pmbA [Yersinia pestis PY-32]
gi|420656039|ref|ZP_15142908.1| protein pmbA [Yersinia pestis PY-34]
gi|420661488|ref|ZP_15147770.1| protein pmbA [Yersinia pestis PY-36]
gi|420666839|ref|ZP_15152593.1| protein pmbA [Yersinia pestis PY-42]
gi|420671696|ref|ZP_15157024.1| modulator of DNA gyrase family protein [Yersinia pestis PY-45]
gi|420677034|ref|ZP_15161881.1| protein pmbA [Yersinia pestis PY-46]
gi|420682603|ref|ZP_15166901.1| protein pmbA [Yersinia pestis PY-47]
gi|420688011|ref|ZP_15171712.1| protein pmbA [Yersinia pestis PY-48]
gi|420693249|ref|ZP_15176298.1| protein pmbA [Yersinia pestis PY-52]
gi|420699005|ref|ZP_15181367.1| protein pmbA [Yersinia pestis PY-53]
gi|420704881|ref|ZP_15186012.1| modulator of DNA gyrase family protein [Yersinia pestis PY-54]
gi|420710160|ref|ZP_15190742.1| protein pmbA [Yersinia pestis PY-55]
gi|420715663|ref|ZP_15195620.1| protein pmbA [Yersinia pestis PY-56]
gi|420721211|ref|ZP_15200360.1| protein pmbA [Yersinia pestis PY-58]
gi|420726643|ref|ZP_15205161.1| protein pmbA [Yersinia pestis PY-59]
gi|420732146|ref|ZP_15210112.1| protein pmbA [Yersinia pestis PY-60]
gi|420737134|ref|ZP_15214617.1| protein pmbA [Yersinia pestis PY-61]
gi|420742612|ref|ZP_15219541.1| protein pmbA [Yersinia pestis PY-63]
gi|420748491|ref|ZP_15224483.1| protein pmbA [Yersinia pestis PY-64]
gi|420753760|ref|ZP_15229218.1| protein pmbA [Yersinia pestis PY-65]
gi|420759734|ref|ZP_15233995.1| protein pmbA [Yersinia pestis PY-66]
gi|420764906|ref|ZP_15238586.1| protein pmbA [Yersinia pestis PY-71]
gi|420770150|ref|ZP_15243279.1| protein pmbA [Yersinia pestis PY-72]
gi|420775130|ref|ZP_15247798.1| protein pmbA [Yersinia pestis PY-76]
gi|420780753|ref|ZP_15252739.1| protein pmbA [Yersinia pestis PY-88]
gi|420786377|ref|ZP_15257648.1| protein pmbA [Yersinia pestis PY-89]
gi|420791408|ref|ZP_15262178.1| modulator of DNA gyrase family protein [Yersinia pestis PY-90]
gi|420796976|ref|ZP_15267190.1| protein pmbA [Yersinia pestis PY-91]
gi|420802072|ref|ZP_15271766.1| protein pmbA [Yersinia pestis PY-92]
gi|420807412|ref|ZP_15276611.1| protein pmbA [Yersinia pestis PY-93]
gi|420812804|ref|ZP_15281440.1| modulator of DNA gyrase family protein [Yersinia pestis PY-94]
gi|420818276|ref|ZP_15286402.1| protein pmbA [Yersinia pestis PY-95]
gi|420823626|ref|ZP_15291182.1| protein pmbA [Yersinia pestis PY-96]
gi|420828688|ref|ZP_15295746.1| protein pmbA [Yersinia pestis PY-98]
gi|420834265|ref|ZP_15300779.1| protein pmbA [Yersinia pestis PY-99]
gi|420839220|ref|ZP_15305256.1| protein pmbA [Yersinia pestis PY-100]
gi|420844412|ref|ZP_15309968.1| protein pmbA [Yersinia pestis PY-101]
gi|420850064|ref|ZP_15315045.1| protein pmbA [Yersinia pestis PY-102]
gi|420855799|ref|ZP_15319877.1| protein pmbA [Yersinia pestis PY-103]
gi|420860886|ref|ZP_15324370.1| protein pmbA [Yersinia pestis PY-113]
gi|421765207|ref|ZP_16201993.1| peptidase PmbA [Yersinia pestis INS]
gi|21956841|gb|AAM83765.1|AE013617_1 PmbA/TldD family protein [Yersinia pestis KIM10+]
gi|45438452|gb|AAS63998.1| Putative modulator of DNA gyrase [Yersinia pestis biovar Microtus
str. 91001]
gi|108777288|gb|ABG19807.1| microcin-processing peptidase 1. Unknown type peptidase. MEROPS
family U62 [Yersinia pestis Nepal516]
gi|108781609|gb|ABG15667.1| microcin-processing peptidase 1. Unknown type peptidase. MEROPS
family U62 [Yersinia pestis Antiqua]
gi|115349310|emb|CAL22279.1| Putative modulator of DNA gyrase [Yersinia pestis CO92]
gi|145209311|gb|ABP38718.1| Putative modulator of DNA gyrase [Yersinia pestis Pestoides F]
gi|149289010|gb|EDM39090.1| Putative modulator of DNA gyrase [Yersinia pestis CA88-4125]
gi|165914588|gb|EDR33202.1| pmbA protein [Yersinia pestis biovar Orientalis str. IP275]
gi|165919699|gb|EDR37032.1| pmbA protein [Yersinia pestis biovar Orientalis str. F1991016]
gi|165989771|gb|EDR42072.1| pmbA protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166206789|gb|EDR51269.1| pmbA protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|166961401|gb|EDR57422.1| pmbA protein [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167050008|gb|EDR61416.1| pmbA protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167054279|gb|EDR64100.1| pmbA protein [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|229678252|gb|EEO74357.1| predicted peptidase required for the maturation and secretion of
the antibiotic peptide MccB17 [Yersinia pestis Nepal516]
gi|229687314|gb|EEO79389.1| predicted peptidase required for the maturation and secretion of
the antibiotic peptide MccB17 [Yersinia pestis biovar
Orientalis str. India 195]
gi|229695624|gb|EEO85671.1| predicted peptidase required for the maturation and secretion of
the antibiotic peptide MccB17 [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229705787|gb|EEO91796.1| predicted peptidase required for the maturation and secretion of
the antibiotic peptide MccB17 [Yersinia pestis Pestoides
A]
gi|262363346|gb|ACY60067.1| Putative modulator of DNA gyrase [Yersinia pestis D106004]
gi|262367276|gb|ACY63833.1| Putative modulator of DNA gyrase [Yersinia pestis D182038]
gi|270337072|gb|EFA47849.1| TldD/PmbA family protein [Yersinia pestis KIM D27]
gi|294355742|gb|ADE66083.1| Putative modulator of DNA gyrase [Yersinia pestis Z176003]
gi|320017141|gb|ADW00713.1| putative peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|342853678|gb|AEL72231.1| peptidase PmbA [Yersinia pestis A1122]
gi|391421626|gb|EIQ84302.1| protein pmbA [Yersinia pestis PY-01]
gi|391421806|gb|EIQ84463.1| protein pmbA [Yersinia pestis PY-02]
gi|391421929|gb|EIQ84570.1| protein pmbA [Yersinia pestis PY-03]
gi|391436669|gb|EIQ97600.1| protein pmbA [Yersinia pestis PY-04]
gi|391437829|gb|EIQ98646.1| protein pmbA [Yersinia pestis PY-05]
gi|391441601|gb|EIR02077.1| protein pmbA [Yersinia pestis PY-06]
gi|391453695|gb|EIR12982.1| protein pmbA [Yersinia pestis PY-07]
gi|391453935|gb|EIR13193.1| protein pmbA [Yersinia pestis PY-08]
gi|391455896|gb|EIR14970.1| protein pmbA [Yersinia pestis PY-09]
gi|391469620|gb|EIR27378.1| protein pmbA [Yersinia pestis PY-10]
gi|391470213|gb|EIR27900.1| protein pmbA [Yersinia pestis PY-11]
gi|391471658|gb|EIR29196.1| protein pmbA [Yersinia pestis PY-12]
gi|391485421|gb|EIR41565.1| protein pmbA [Yersinia pestis PY-13]
gi|391486986|gb|EIR42968.1| protein pmbA [Yersinia pestis PY-15]
gi|391487034|gb|EIR43011.1| modulator of DNA gyrase family protein [Yersinia pestis PY-14]
gi|391501623|gb|EIR56002.1| protein pmbA [Yersinia pestis PY-16]
gi|391501718|gb|EIR56089.1| protein pmbA [Yersinia pestis PY-19]
gi|391506602|gb|EIR60507.1| protein pmbA [Yersinia pestis PY-25]
gi|391517493|gb|EIR70292.1| protein pmbA [Yersinia pestis PY-29]
gi|391518745|gb|EIR71440.1| protein pmbA [Yersinia pestis PY-34]
gi|391519571|gb|EIR72196.1| protein pmbA [Yersinia pestis PY-32]
gi|391531973|gb|EIR83417.1| protein pmbA [Yersinia pestis PY-36]
gi|391534796|gb|EIR85940.1| protein pmbA [Yersinia pestis PY-42]
gi|391537167|gb|EIR88082.1| modulator of DNA gyrase family protein [Yersinia pestis PY-45]
gi|391550425|gb|EIS00044.1| protein pmbA [Yersinia pestis PY-46]
gi|391550564|gb|EIS00167.1| protein pmbA [Yersinia pestis PY-47]
gi|391550818|gb|EIS00394.1| protein pmbA [Yersinia pestis PY-48]
gi|391565181|gb|EIS13321.1| protein pmbA [Yersinia pestis PY-52]
gi|391566427|gb|EIS14420.1| protein pmbA [Yersinia pestis PY-53]
gi|391570170|gb|EIS17671.1| modulator of DNA gyrase family protein [Yersinia pestis PY-54]
gi|391579994|gb|EIS26045.1| protein pmbA [Yersinia pestis PY-55]
gi|391581662|gb|EIS27521.1| protein pmbA [Yersinia pestis PY-56]
gi|391592054|gb|EIS36546.1| protein pmbA [Yersinia pestis PY-58]
gi|391595620|gb|EIS39644.1| protein pmbA [Yersinia pestis PY-60]
gi|391596331|gb|EIS40279.1| protein pmbA [Yersinia pestis PY-59]
gi|391610112|gb|EIS52442.1| protein pmbA [Yersinia pestis PY-61]
gi|391610434|gb|EIS52719.1| protein pmbA [Yersinia pestis PY-63]
gi|391612039|gb|EIS54154.1| protein pmbA [Yersinia pestis PY-64]
gi|391623434|gb|EIS64228.1| protein pmbA [Yersinia pestis PY-65]
gi|391626608|gb|EIS66932.1| protein pmbA [Yersinia pestis PY-66]
gi|391633805|gb|EIS73159.1| protein pmbA [Yersinia pestis PY-71]
gi|391635455|gb|EIS74614.1| protein pmbA [Yersinia pestis PY-72]
gi|391645844|gb|EIS83679.1| protein pmbA [Yersinia pestis PY-76]
gi|391648965|gb|EIS86420.1| protein pmbA [Yersinia pestis PY-88]
gi|391653226|gb|EIS90212.1| protein pmbA [Yersinia pestis PY-89]
gi|391658855|gb|EIS95221.1| modulator of DNA gyrase family protein [Yersinia pestis PY-90]
gi|391666434|gb|EIT01901.1| protein pmbA [Yersinia pestis PY-91]
gi|391675759|gb|EIT10246.1| protein pmbA [Yersinia pestis PY-93]
gi|391676118|gb|EIT10564.1| protein pmbA [Yersinia pestis PY-92]
gi|391676415|gb|EIT10827.1| modulator of DNA gyrase family protein [Yersinia pestis PY-94]
gi|391689943|gb|EIT23022.1| protein pmbA [Yersinia pestis PY-95]
gi|391692011|gb|EIT24887.1| protein pmbA [Yersinia pestis PY-96]
gi|391693779|gb|EIT26499.1| protein pmbA [Yersinia pestis PY-98]
gi|391707271|gb|EIT38635.1| protein pmbA [Yersinia pestis PY-99]
gi|391710142|gb|EIT41239.1| protein pmbA [Yersinia pestis PY-100]
gi|391710633|gb|EIT41673.1| protein pmbA [Yersinia pestis PY-101]
gi|391723046|gb|EIT52785.1| protein pmbA [Yersinia pestis PY-102]
gi|391723243|gb|EIT52957.1| protein pmbA [Yersinia pestis PY-103]
gi|391726420|gb|EIT55770.1| protein pmbA [Yersinia pestis PY-113]
gi|411173637|gb|EKS43679.1| peptidase PmbA [Yersinia pestis INS]
Length = 446
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 172/455 (37%), Positives = 273/455 (60%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K ++ + +Q L A+ +G+ + + ++ G SV R G+++ +E N+D
Sbjct: 1 MKVVTQVAEQRKTLEQAVAQALELAR-VGSDAAEVAVSKTTGISVSTRFGEVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q K G++ST+D ++ T+ AA +IAR+T+ D +AG D++ L
Sbjct: 60 GALGITVYHQQRK----GSASTTDLNPDAVARTVQAALDIARYTSPDPYAGPADKSLLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
+ D L+ P L + L+A R E A + I N E + + NSHG +
Sbjct: 116 DAPDLDLFHPGDLDAEQGILLAARAEQAALQADKRITNTEGGSFNSHYGIKVFGNSHGML 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S+H +S S IA +M+RD Y+ + L PE +G A+RT+SRL +K+
Sbjct: 176 QSYCSSRHSLSSSVIAEHNGDMERDYAYTIGRRMEDLATPEWVGEECARRTLSRLSPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
T + PVLF A +A L ISG ++YRKSTFL+D LG++I + I E PH+L
Sbjct: 236 PTMQSPVLFAAEVATGLFGHLVSAISGGNIYRKSTFLLDHLGQQILPEWLTIEEHPHLLR 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+T +R +VK+G++Q Y L++YSA+KLG+++TG++GG H+ I
Sbjct: 296 GLASTPFDSEGVRTLQREIVKDGVLQTYLLTSYSARKLGLQSTGHAGGIHNWRIAGQ--- 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ MLK+++ GL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L
Sbjct: 353 -GQDFAGMLKQLDKGLVVTELMGQGVSTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M + IV++GSD+ TR++ GS+L+ M IAG+
Sbjct: 412 KDMLRNIVSVGSDIETRSNIQCGSVLLPVMKIAGE 446
>gi|15837733|ref|NP_298421.1| PmbA protein [Xylella fastidiosa 9a5c]
gi|9106093|gb|AAF83941.1|AE003949_5 PmbA protein [Xylella fastidiosa 9a5c]
Length = 428
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 167/434 (38%), Positives = 256/434 (58%), Gaps = 8/434 (1%)
Query: 25 MLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNS 84
ML A GA+ + + +E G V VR G ++ +E D+++ V +Y K G +
Sbjct: 1 MLERAHACGATQAEVGCSEERGLDVNVRMGDVETVESTCDRSIGVTLYFGHRK----GCA 56
Query: 85 STSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKL 144
ST+D + SL T+ A IAR+T D GL D + D + PW L A
Sbjct: 57 STADLQEASLEATVAQACAIARYTEDDPANGLADPVRMATVFPDLDCWHPWTLEAGAAVD 116
Query: 145 IAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK 204
+A CE ++ IVN++ V+T+ + + ANSHGF+ ++H +S + IA G
Sbjct: 117 LALACEAAGRAADARIVNSDGASVSTRFALSVYANSHGFVGRERMTQHSMSCALIAGHGD 176
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
MQRD WY++ + L+ P +G AA+RT++RL+ + ++T + PVLF +A L+
Sbjct: 177 GMQRDGWYTNALAREDLELPVAVGRKAAERTVARLQPRSLATTQLPVLFVPEVARSLIGH 236
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
+SG +LYR+++FL+DS+G ++F I E PH+ S++FD EGV T +V
Sbjct: 237 LLNAVSGGALYRRASFLLDSVGTRLFPEWFAINERPHLRRGLRSATFDAEGVVTCDAPLV 296
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
G++Q Y LS+YSA+KLG+++T N+GG H+L +I+N L ++ + GLLVTE
Sbjct: 297 AGGVLQRYVLSSYSARKLGLQSTANAGGVHNLEVIANAA----GLDALVAGLPRGLLVTE 352
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
LMG G+N +TGDYS+GA G+WIENG I Y V+ +TI+G L+ MF I A+G+DV R+
Sbjct: 353 LMGSGVNPVTGDYSRGAAGFWIENGAIAYPVDGLTIAGNLREMFSAIEAVGADVDRRSHV 412
Query: 445 TSGSILIENMIIAG 458
+ GS+LI M++AG
Sbjct: 413 SMGSLLIGRMMVAG 426
>gi|416855078|ref|ZP_11911323.1| PmbA protein [Pseudomonas aeruginosa 138244]
gi|416857052|ref|ZP_11912491.1| PmbA protein [Pseudomonas aeruginosa 138244]
gi|334841128|gb|EGM19765.1| PmbA protein [Pseudomonas aeruginosa 138244]
gi|334843361|gb|EGM21952.1| PmbA protein [Pseudomonas aeruginosa 138244]
gi|453046190|gb|EME93907.1| PmbA protein [Pseudomonas aeruginosa PA21_ST175]
Length = 449
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 171/443 (38%), Positives = 269/443 (60%), Gaps = 8/443 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
+ ++ + ++ A++ GAS + + G S VR+G+++ +E N D+ + +Y
Sbjct: 15 DLREQVEQIIAEARRQGASACEVAVSLEQGLSTGVRQGEVETVEFNRDQGFGITLYAGQR 74
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS + ++ +T+ AA IAR T+ D AGL D + + LY PW
Sbjct: 75 K----GSASTSATGEAAIRETVAAALAIARHTSEDECAGLADAALMARELPELDLYHPWS 130
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
LS + A A CE AF + + + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 LSPEQAVERALACEAAAFAADKRVTKADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSC 190
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L E IG AA+R SRL A+ + T + PVLF
Sbjct: 191 VMIAEGEGQMQRDYWYDVNRRGEALASAESIGRRAAERAASRLGARPVQTAEVPVLFAPE 250
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
+A L F ISG SLYRKS+FL +LG+++F + I E PH++G+ GS+SFD++G+
Sbjct: 251 IAVGLFGHFLGAISGGSLYRKSSFLEGALGQRLFPEWLSIDERPHLVGALGSASFDSDGL 310
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+NG + Y L TYS +KLG+ +T N+GG H+L + + ++ ++++M
Sbjct: 311 ATYAKPFVENGELVSYVLGTYSGRKLGLPSTANAGGVHNLFV----SHGDEDQAALIRRM 366
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ+ V+E+TI+ L+++F++IVA+G
Sbjct: 367 GRGLLVTELMGQGVNLVTGDYSRGAAGYWVENGEIQFPVQEVTIAANLRDLFRRIVAVGK 426
Query: 437 DVLTRNSNTSGSILIENMIIAGK 459
D+ R + +GS+L+E+M++AG+
Sbjct: 427 DIERRGNLHTGSVLVESMMVAGR 449
>gi|397166422|ref|ZP_10489866.1| protein pmbA [Enterobacter radicincitans DSM 16656]
gi|396091510|gb|EJI89076.1| protein pmbA [Enterobacter radicincitans DSM 16656]
Length = 446
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 165/426 (38%), Positives = 258/426 (60%), Gaps = 8/426 (1%)
Query: 34 ASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKS 93
A + + ++ G V R G+++ +E N+D + + +Y Q+ K G++S++D +
Sbjct: 29 ADGAEVAVSKTTGIGVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPDA 84
Query: 94 LYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEA 153
+ T+ AA +IAR+T+ D +AG+ D+ L + D L+ P ++ D+A A R E A
Sbjct: 85 IARTVQAALDIARYTSPDPYAGVADKELLAFDAPDLDLFHPAEVTPDEAIEWAARAEQTA 144
Query: 154 FNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYS 213
+ I N E + + NSHG + Y ++H +S IA + EM+RD Y+
Sbjct: 145 LKADKRITNTEGGSFNSHYGIKVFGNSHGMLQSYCSTRHSLSSCVIAEENGEMERDYAYT 204
Query: 214 SNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNS 273
D L PE +G AKRT+SRL +K+ T K PV+F +A L I+G +
Sbjct: 205 IGRDINDLKTPEWVGDECAKRTLSRLSPRKLPTMKAPVIFGHEVATGLFGHLVGAIAGGA 264
Query: 274 LYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYF 333
+YRKSTFL+D LGK+I + I E PH+ S+ FD+EGV+T++R ++K+G++ +
Sbjct: 265 VYRKSTFLLDYLGKQILPEWLTIEEHPHLRKGLASTPFDSEGVRTERRDIIKDGVLMQWL 324
Query: 334 LSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYI 393
L+ YSA+KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ I
Sbjct: 325 LTNYSARKLGLKSTGHAGGIHNWRIAGRGL----SFEQMLKEMGTGLVVTELMGQGVSGI 380
Query: 394 TGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIEN 453
TGDYS+GA G+W+ENG+IQY V EITI+G L+ M++ IV IG D+ R++ GS+L+
Sbjct: 381 TGDYSRGASGFWVENGEIQYPVSEITIAGNLKEMWRNIVTIGDDIEQRSNIQCGSVLLPE 440
Query: 454 MIIAGK 459
M IAG+
Sbjct: 441 MKIAGQ 446
>gi|116052504|ref|YP_792817.1| PmbA protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|218893563|ref|YP_002442432.1| PmbA protein [Pseudomonas aeruginosa LESB58]
gi|254238867|ref|ZP_04932190.1| PmbA protein [Pseudomonas aeruginosa C3719]
gi|296391182|ref|ZP_06880657.1| PmbA protein [Pseudomonas aeruginosa PAb1]
gi|355650228|ref|ZP_09055967.1| hypothetical protein HMPREF1030_05053 [Pseudomonas sp. 2_1_26]
gi|386060624|ref|YP_005977146.1| PmbA protein [Pseudomonas aeruginosa M18]
gi|386064082|ref|YP_005979386.1| PmbA protein [Pseudomonas aeruginosa NCGM2.S1]
gi|392986036|ref|YP_006484623.1| PmbA protein [Pseudomonas aeruginosa DK2]
gi|416876034|ref|ZP_11919010.1| PmbA protein [Pseudomonas aeruginosa 152504]
gi|420141617|ref|ZP_14649290.1| PmbA protein [Pseudomonas aeruginosa CIG1]
gi|421162821|ref|ZP_15621626.1| PmbA protein [Pseudomonas aeruginosa ATCC 25324]
gi|421170224|ref|ZP_15628196.1| PmbA protein [Pseudomonas aeruginosa ATCC 700888]
gi|421176614|ref|ZP_15634276.1| PmbA protein [Pseudomonas aeruginosa CI27]
gi|451986195|ref|ZP_21934384.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Pseudomonas aeruginosa 18A]
gi|115587725|gb|ABJ13740.1| PmbA protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126170798|gb|EAZ56309.1| PmbA protein [Pseudomonas aeruginosa C3719]
gi|218773791|emb|CAW29605.1| PmbA protein [Pseudomonas aeruginosa LESB58]
gi|334841312|gb|EGM19944.1| PmbA protein [Pseudomonas aeruginosa 152504]
gi|347306930|gb|AEO77044.1| PmbA protein [Pseudomonas aeruginosa M18]
gi|348032641|dbj|BAK88001.1| PmbA protein [Pseudomonas aeruginosa NCGM2.S1]
gi|354826898|gb|EHF11100.1| hypothetical protein HMPREF1030_05053 [Pseudomonas sp. 2_1_26]
gi|392321541|gb|AFM66921.1| PmbA protein [Pseudomonas aeruginosa DK2]
gi|403245645|gb|EJY59428.1| PmbA protein [Pseudomonas aeruginosa CIG1]
gi|404524084|gb|EKA34443.1| PmbA protein [Pseudomonas aeruginosa ATCC 700888]
gi|404530618|gb|EKA40607.1| PmbA protein [Pseudomonas aeruginosa CI27]
gi|404533206|gb|EKA43042.1| PmbA protein [Pseudomonas aeruginosa ATCC 25324]
gi|451756091|emb|CCQ86907.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Pseudomonas aeruginosa 18A]
Length = 449
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 171/443 (38%), Positives = 269/443 (60%), Gaps = 8/443 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
+ ++ + ++ A++ GAS + + G S VR+G+++ +E N D+ + +Y
Sbjct: 15 DLREQVEQIIAEARRQGASACEVAVSLEQGLSTSVRQGEVETVEFNRDQGFGITLYAGQR 74
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS + ++ +T+ AA IAR T+ D AGL D + + LY PW
Sbjct: 75 K----GSASTSATGEAAIRETVAAALAIARHTSEDECAGLADAALMARELPELDLYHPWS 130
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
LS + A A CE AF + + + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 LSPEQAVERALACEAAAFAADKRVTKADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSC 190
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L E IG AA+R SRL A+ + T + PVLF
Sbjct: 191 VMIAEGEGQMQRDYWYDVNRRGEALASAESIGRRAAERAASRLGARPVQTAEVPVLFAPE 250
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
+A L F ISG SLYRKS+FL +LG+++F + I E PH++G+ GS+SFD++G+
Sbjct: 251 IAVGLFGHFLGAISGGSLYRKSSFLEGALGQRLFPEWLSIDERPHLVGALGSASFDSDGL 310
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+NG + Y L TYS +KLG+ +T N+GG H+L + + ++ ++++M
Sbjct: 311 ATYAKPFVENGELVSYVLGTYSGRKLGLPSTANAGGVHNLFV----SHGDEDQAALIRRM 366
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ+ V+E+TI+ L+++F++IVA+G
Sbjct: 367 GRGLLVTELMGQGVNLVTGDYSRGAAGYWVENGEIQFPVQEVTIAANLRDLFRRIVAVGK 426
Query: 437 DVLTRNSNTSGSILIENMIIAGK 459
D+ R + +GS+L+E+M++AG+
Sbjct: 427 DIERRGNLHTGSVLVESMMVAGR 449
>gi|152985460|ref|YP_001350422.1| putative modulator of DNA gyrase [Pseudomonas aeruginosa PA7]
gi|150960618|gb|ABR82643.1| PmbA protein [Pseudomonas aeruginosa PA7]
Length = 449
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 172/443 (38%), Positives = 270/443 (60%), Gaps = 8/443 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
+ ++ + ++ A++ GAS + + G S VR+G+++ +E N D+ + +Y
Sbjct: 15 DLREQVEQIIAEARRQGASACEVAVSLEQGLSTSVRQGEVETVEFNRDQGFGITLYAGQR 74
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS + ++ +T+ AA IAR T+ D+ AGL D + + LY PW
Sbjct: 75 K----GSASTSATGEAAIRETVAAALAIARHTSEDDCAGLADAALMARELPELDLYHPWS 130
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
L+ + A A CE AF + + + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 LTPEQAVERALACEAAAFAADRRVTKADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSC 190
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L E IG AA+R SRL A+ + T + PVLF
Sbjct: 191 VMIAEGEGQMQRDYWYDVNRRGEALASAESIGRRAAERAASRLGARPVQTAEVPVLFAPE 250
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
+A L F ISG SLYRKS+FL +LG+++F + I E PH++G+ GS+SFD++G+
Sbjct: 251 IAVGLFGHFLGAISGGSLYRKSSFLEGALGQRLFPEWLSIDERPHLVGALGSASFDSDGL 310
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V++G + Y L TYS +KLG+ +T N+GG H+L + + ++ +L++M
Sbjct: 311 ATYAKPFVESGELVSYVLGTYSGRKLGLPSTANAGGVHNLFV----SHGDEDQAALLRRM 366
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ+ V+E+TI+ L+++F++IVAIG
Sbjct: 367 GRGLLVTELMGQGVNLVTGDYSRGAAGYWVENGEIQFPVQEVTIAANLRDLFRRIVAIGK 426
Query: 437 DVLTRNSNTSGSILIENMIIAGK 459
DV R + +GS+L+E+M++AG+
Sbjct: 427 DVEGRGNLHTGSVLVESMMVAGR 449
>gi|197336232|ref|YP_002155138.1| peptidase PmbA [Vibrio fischeri MJ11]
gi|197317722|gb|ACH67169.1| PmbA protein [Vibrio fischeri MJ11]
Length = 447
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 179/453 (39%), Positives = 265/453 (58%), Gaps = 10/453 (2%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
+ + + K E + L+ A + AS + + + G SV G+++ +E N D +
Sbjct: 4 KQQMMNQKIELEAAVAKALDMATQ-HASAAEVAITKTTGISVSTLMGEVENVEFNRDGAL 62
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
+ +Y K G++STSD K++ T+ AA +IA +T+ D F+G + + N
Sbjct: 63 GITVYRGHRK----GSASTSDLSDKAIQQTVAAALDIANYTSEDPFSGPAPKELMAKNMP 118
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ P D A A E A ++S I ++ + + NSHG ++ Y
Sbjct: 119 DLDLFHPDEPEPDYAAQKAIEAEQAALEYHSSIKQSDGASYDSHYGIKVYGNSHGMLASY 178
Query: 188 PFSKHIISISPIAI-KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
P S+ IS S I + K +M+RD Y+ L + +G AAKRT+SRL AKK+ T
Sbjct: 179 PSSRQSISCSVIGVDKNGDMERDYSYTVARHRDDLWDAKKVGLEAAKRTVSRLDAKKLDT 238
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
K PV+F A +A LL ISG +LYRKSTF++D L +KI + E PHIL
Sbjct: 239 MKVPVMFAADVATGLLGHLVMAISGANLYRKSTFMLDKLNEKILPEWFNVSERPHILKGL 298
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
SS FD+EG+ TQ R ++ +G++ Y L++Y+A+KL M TG++GG H+ + S +
Sbjct: 299 ASSPFDSEGLYTQDREIITDGVLATYLLTSYAARKLNMTPTGHAGGIHNWFVKS----TG 354
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+ ++MLK MNTGLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L +
Sbjct: 355 QSFEQMLKTMNTGLLVTELMGQGVNTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLAD 414
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M+ IVA+G+DV TR+ +GSILIE+M IAG+
Sbjct: 415 MYHNIVAVGNDVETRSQIQTGSILIESMKIAGQ 447
>gi|238793741|ref|ZP_04637363.1| Protein pmbA [Yersinia intermedia ATCC 29909]
gi|238726982|gb|EEQ18514.1| Protein pmbA [Yersinia intermedia ATCC 29909]
Length = 446
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 172/455 (37%), Positives = 272/455 (59%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K ++ + +Q L A+ +G+ + + ++ G SV R G+++ +E N+D
Sbjct: 1 MKVVTQVAEQRKTLEQAVAQALELAR-VGSDAAEVAVSKTTGISVSTRFGEVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q K G++ST+D ++ T+ AA +IAR+T+ D +AG +++ L
Sbjct: 60 GALGITVYHQQRK----GSASTTDLNPDAVARTVQAALDIARYTSPDPYAGAAEKSLLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
D L+ P L + L+A R E A + I N E + + NSHG +
Sbjct: 116 EAPDLDLFHPSDLDAEQGILLAARAEQAALQADKRITNTEGGSFNSHYGIKVFGNSHGML 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S+H +S S IA +M+RD Y+ + L PE +G A+RT+SRL +K+
Sbjct: 176 QSYCSSRHSLSSSVIAEHNGDMERDYAYTIGRRMEDLASPEWVGEECARRTLSRLSPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
T + PVLF A +A L ISG ++YRKSTFL+D LGK+I + I E PH+L
Sbjct: 236 PTMQSPVLFAAEVATGLFGHLVSAISGGNIYRKSTFLLDHLGKQILPEWLTIEEHPHLLR 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+T +R +VK+G++Q Y L++YSA+KLG+++TG++GG H+ I
Sbjct: 296 GLASTPFDSEGVRTLQRKIVKDGVLQTYLLTSYSARKLGLQSTGHAGGIHNWRIAGQ--- 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ MLK+++ GL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L
Sbjct: 353 -GQDFAGMLKQLDKGLVVTELMGQGVSTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M + IV++GSD+ TR++ GS+L+ M IAG+
Sbjct: 412 KDMLRNIVSVGSDIETRSNIQCGSVLLPAMKIAGE 446
>gi|238789789|ref|ZP_04633571.1| Protein pmbA [Yersinia frederiksenii ATCC 33641]
gi|238722148|gb|EEQ13806.1| Protein pmbA [Yersinia frederiksenii ATCC 33641]
Length = 446
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 174/455 (38%), Positives = 272/455 (59%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K ++ + +Q L A+ G+ + + ++ G SV R G+++ +E N+D
Sbjct: 1 MKVVTQVAQQRKTLEQAVAQALELARA-GSDAAEVAVSKTTGISVSTRFGEVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q K G++ST+D ++ T+ AA +IAR+T+ D +AG +++ L
Sbjct: 60 GALGITVYHQQRK----GSASTTDLNPDAVARTVQAALDIARYTSPDPYAGPAEKSLLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
+ D L+ P L + L+A R E A + I N E + + NSHG +
Sbjct: 116 DAPDLDLFHPSDLDAEQGILLAARAEQAALQADKRITNTEGGSFNSHYGIKVFGNSHGML 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S+H +S S IA +M+RD Y+ + L PE +G A+RT+SRL +K+
Sbjct: 176 QSYCSSRHSLSSSVIAEHNGDMERDYAYTIGRRIEDLTSPEWVGEECARRTLSRLSPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
T + PVLF A +A L ISG ++YRKSTFL+D LGK+I + I E PH+L
Sbjct: 236 PTMQSPVLFAAEVATGLFGHLVSAISGGNIYRKSTFLLDHLGKQILPEWLTIEEHPHLLR 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+T +R +VK+G++Q Y L++YSA+KLG+++TG++GG H+ I
Sbjct: 296 GLASTPFDSEGVRTVQREIVKDGVLQTYLLTSYSARKLGLQSTGHAGGIHNWRIAGQ--- 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ MLK+++ GL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L
Sbjct: 353 -GQDFAGMLKQLDKGLVVTELMGQGVSTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M + IV+IGSD+ TR++ GSIL+ M IAG+
Sbjct: 412 KDMLRNIVSIGSDIETRSNIQCGSILLPAMKIAGE 446
>gi|388601484|ref|ZP_10159880.1| peptidase PmbA [Vibrio campbellii DS40M4]
Length = 447
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 176/447 (39%), Positives = 268/447 (59%), Gaps = 12/447 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
++E +Q L A + + + + G SV R G ++ +E N+D + + +Y
Sbjct: 11 RTELEQAVSRALEIAAA-KSDAAEVAITKSTGLSVSTRMGDVENVEFNSDGALGITVY-- 67
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYT 133
GK+ G++STSD + ++ + AA +IA++T+ D FAG P E ++ P D L+
Sbjct: 68 RGKRK--GSASTSDLSEAAIEQMVLAALDIAQYTSEDPFAGPAPKEYMVKEIP-DLDLFH 124
Query: 134 PWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHI 193
P D A +A E EA N++ I ++ + + NSHG ++ Y S+H
Sbjct: 125 PDAPDPDYAAQVAIAAEKEALNYSDTIKQSDGASYDSHYGVKVYGNSHGLLASYASSRHS 184
Query: 194 ISISPIAI-KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252
S I + + EM+RD Y+ L PE +G AA++TISRL A+K+ T K PV+
Sbjct: 185 TSCCVIGVGQNGEMERDYSYTVARHRDDLWTPETVGRNAAEKTISRLDAQKLKTGKYPVM 244
Query: 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFD 312
F A +A L+ ISG +LYRKS+FL+D LGK++ I E PH+L SS FD
Sbjct: 245 FAADVATGLIGHLVMAISGGNLYRKSSFLLDHLGKQVLPEWFNISERPHVLRGLASSPFD 304
Query: 313 NEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEM 372
+EGV TQ R ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S + N ++M
Sbjct: 305 SEGVYTQDREIITDGVLATYLLTSYAARKMKMDPTGHAGGIHNWYVKS----TGQNFEQM 360
Query: 373 LKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIV 432
LK++ TGLLVTE MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MF QIV
Sbjct: 361 LKELGTGLLVTETMGQGVNVVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFNQIV 420
Query: 433 AIGSDVLTRNSNTSGSILIENMIIAGK 459
A+GSDV TR+ +GSIL++ M +AG+
Sbjct: 421 AVGSDVETRSQIQTGSILLDTMKVAGE 447
>gi|15599668|ref|NP_253162.1| PmbA protein [Pseudomonas aeruginosa PAO1]
gi|418583889|ref|ZP_13147955.1| PmbA protein [Pseudomonas aeruginosa MPAO1/P1]
gi|418589737|ref|ZP_13153658.1| PmbA protein [Pseudomonas aeruginosa MPAO1/P2]
gi|421519025|ref|ZP_15965698.1| PmbA protein [Pseudomonas aeruginosa PAO579]
gi|9950709|gb|AAG07860.1|AE004861_1 PmbA protein [Pseudomonas aeruginosa PAO1]
gi|375046368|gb|EHS38929.1| PmbA protein [Pseudomonas aeruginosa MPAO1/P1]
gi|375051593|gb|EHS44060.1| PmbA protein [Pseudomonas aeruginosa MPAO1/P2]
gi|404346430|gb|EJZ72780.1| PmbA protein [Pseudomonas aeruginosa PAO579]
Length = 449
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 171/443 (38%), Positives = 269/443 (60%), Gaps = 8/443 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
+ ++ + ++ A++ GAS + + G S VR+G+++ +E N D+ + +Y
Sbjct: 15 DLREQVEQIIAEARRQGASACEVAVSLEQGLSTSVRQGEVETVEFNRDQGFGITLYAGQR 74
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS + ++ +T+ AA IAR T+ D AGL D + + LY PW
Sbjct: 75 K----GSASTSATGEAAIRETVAAALAIARHTSEDECAGLADAALMARELPELDLYHPWS 130
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
LS + A A CE AF + + + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 LSPEQAVERALACEAAAFAADKRVTKADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSC 190
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L E IG AA+R SRL A+ + T + PVLF
Sbjct: 191 VMIAEGEGQMQRDYWYDVNRRGEALASAESIGRRAAERAASRLGARPVQTAEVPVLFAPE 250
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
+A L F ISG SLYRKS+FL +LG+++F + I E PH++G+ GS+SFD++G+
Sbjct: 251 IAVGLFGHFLGAISGGSLYRKSSFLEGALGQRLFPEWLSIDERPHLVGALGSASFDSDGL 310
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+NG + Y L TYS +KLG+ +T N+GG H+L + + ++ ++++M
Sbjct: 311 ATYAKPFVENGELVSYVLGTYSGRKLGLPSTANAGGVHNLFV----SHGDEDQAALIRRM 366
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ+ V+E+TI+ L+++F++IVA+G
Sbjct: 367 ERGLLVTELMGQGVNLVTGDYSRGAAGYWVENGEIQFPVQEVTIAANLRDLFRRIVAVGK 426
Query: 437 DVLTRNSNTSGSILIENMIIAGK 459
D+ R + +GS+L+E+M++AG+
Sbjct: 427 DIERRGNLHTGSVLVESMMVAGR 449
>gi|238751387|ref|ZP_04612880.1| Protein pmbA [Yersinia rohdei ATCC 43380]
gi|238710445|gb|EEQ02670.1| Protein pmbA [Yersinia rohdei ATCC 43380]
Length = 446
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 173/455 (38%), Positives = 271/455 (59%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K ++ + +Q L A+ G+ + + ++ G SV R G+++ +E N+D
Sbjct: 1 MKVVTQVAQQRKTLEQAVAQALELARA-GSDAAEVAVSKTTGISVSTRFGEVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q K G++ST+D ++ T+ AA +IAR+T+ D +AG +++ L
Sbjct: 60 GALGITVYHQQRK----GSASTTDLNPDAVARTVQAALDIARYTSPDPYAGPAEKSLLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
D L+ P L + L+A R E A + I N E + + NSHG +
Sbjct: 116 EAPDLDLFHPSDLDAEQGILLAARAEQAALQADKRITNTEGGSFNSHYGIKVFGNSHGML 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S+H +S S IA +M+RD Y+ + L PE +G A+RT+SRL +K+
Sbjct: 176 QSYCSSRHSLSSSVIAEHNGDMERDYAYTIGRRMEDLASPEWVGEECARRTLSRLSPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
T + PVLF A +A L ISG ++YRKSTFL+D LGK+I + I E PH+L
Sbjct: 236 PTMQSPVLFAAEVATGLFGHLVSAISGGNIYRKSTFLLDHLGKQILPEWLTIEEHPHLLR 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+T +R +VK+G++Q Y L++YSA+KLG++TTG++GG H+ I
Sbjct: 296 GLASTPFDSEGVRTLQREIVKDGVLQTYLLTSYSARKLGLQTTGHAGGIHNWRIAGQ--- 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ MLK+++ GL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L
Sbjct: 353 -GQDFAGMLKQLDKGLVVTELMGQGVSTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M + IV++GSD+ TR++ GS+L+ M IAG+
Sbjct: 412 KDMLRNIVSVGSDIETRSNIQCGSVLLPAMKIAGE 446
>gi|421155836|ref|ZP_15615302.1| PmbA protein [Pseudomonas aeruginosa ATCC 14886]
gi|424944762|ref|ZP_18360525.1| PmbA protein [Pseudomonas aeruginosa NCMG1179]
gi|346061208|dbj|GAA21091.1| PmbA protein [Pseudomonas aeruginosa NCMG1179]
gi|404520013|gb|EKA30722.1| PmbA protein [Pseudomonas aeruginosa ATCC 14886]
Length = 449
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 171/443 (38%), Positives = 269/443 (60%), Gaps = 8/443 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
+ ++ + ++ A++ GAS + + G S VR+G+++ +E N D+ + +Y
Sbjct: 15 DLREQVEQIIAEARRQGASACEVAVSLEQGLSTSVRQGEVETVEFNRDQGFGITLYAGQR 74
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS + ++ +T+ AA IAR T+ D AGL D + + LY PW
Sbjct: 75 K----GSASTSATGEAAIRETVAAALAIARHTSEDECAGLADAALMARELPELDLYHPWS 130
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
LS + A A CE AF + + + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 LSPEQAVERALACEAAAFAADKRVTKADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSC 190
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L E IG AA+R SRL A+ + T + PVLF
Sbjct: 191 VMIAEGEGQMQRDYWYDVNRRGEALASAESIGRRAAERAASRLGARPVQTAEVPVLFAPE 250
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
+A L F ISG SLYRKS+FL +LG+++F + I E PH++G+ GS+SFD++G+
Sbjct: 251 IAVGLFGHFLGAISGGSLYRKSSFLEGALGQRLFPDWLSIDERPHLVGALGSASFDSDGL 310
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+NG + Y L TYS +KLG+ +T N+GG H+L + + ++ ++++M
Sbjct: 311 ATYAKPFVENGELVSYVLGTYSGRKLGLPSTANAGGVHNLFV----SHGDEDQAALIRRM 366
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ+ V+E+TI+ L+++F++IVA+G
Sbjct: 367 GRGLLVTELMGQGVNLVTGDYSRGAAGYWVENGEIQFPVQEVTIAANLRDLFRRIVAVGK 426
Query: 437 DVLTRNSNTSGSILIENMIIAGK 459
D+ R + +GS+L+E+M++AG+
Sbjct: 427 DIERRGNLHTGSVLVESMMVAGR 449
>gi|330501867|ref|YP_004378736.1| C69 family peptidase [Pseudomonas mendocina NK-01]
gi|328916153|gb|AEB56984.1| peptidase U62, modulator of DNA gyrase [Pseudomonas mendocina
NK-01]
Length = 448
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 172/441 (39%), Positives = 266/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
QQ + +L A++ GAS + + G G S VR+G+++ +E N D+ + +Y+ K
Sbjct: 15 LQQQVETILAEARRQGASACEVAVSAGQGLSTTVRQGEVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS + ++ +T+ AA IA+ + D AGL D + + LY PW +
Sbjct: 75 ----GSASTSATGEAAIRETVAAALAIAKHASEDECAGLADAALMARELPELDLYHPWSI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF ++ I N + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 TPEQAVEQALACEAAAFAADTRIKNADGTSLNTHQGCRVYGNSHGFVGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N + L IG AA+R +SRL A+ + T + PVLF A L
Sbjct: 191 MIAEGEGQMQRDYWYDVNRQGELLADAAGIGQRAAERAVSRLGARPVPTCEVPVLFAAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L + ISG +LYR S+FL +LG+++F + + E PH+ + GS++FD +G+
Sbjct: 251 AGGLFSHLLAAISGGNLYRHSSFLEGALGQRLFPEWLSLDERPHLPRALGSAAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TYS +KLG+ +T NSGG H+L + T ++ + ++++M
Sbjct: 311 TYAKPFVEKGELVSYVLGTYSGRKLGLPSTANSGGVHNLFV----THGDEDQQALIRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G L++MF+QIVA+G D
Sbjct: 367 RGLLVTELMGQGLNLVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNLRDMFRQIVAVGRD 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R + +GS+LIE M +AG
Sbjct: 427 LERRGNICTGSVLIEKMTVAG 447
>gi|423127045|ref|ZP_17114724.1| protein pmbA [Klebsiella oxytoca 10-5250]
gi|376395904|gb|EHT08549.1| protein pmbA [Klebsiella oxytoca 10-5250]
Length = 450
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 168/453 (37%), Positives = 272/453 (60%), Gaps = 11/453 (2%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHS---SIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
K I ++ ++ ++ + A ++ A S + ++ G V R G+++ +E N+D
Sbjct: 6 KVISQVAQQRKTLEEAVTTALELAAGKSDGAEVSVSKTTGIGVSTRYGEVENVEFNSDGA 65
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +Y Q+ K G++S++D +++ T+ AA +IAR+T+ D AG+ D+ L
Sbjct: 66 LGITVYHQNRK----GSASSTDLSPQAIARTVQAALDIARYTSPDPCAGVADKELLAFEA 121
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D L+ P +S D+A +A R E A + I N E + + NSHG +
Sbjct: 122 PDLDLFHPAEVSPDEAIELASRAEQAALKADKRISNTEGGSFNSHYGIKVFGNSHGMLQS 181
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
Y ++H +S IA + +M+RD Y+ L PE +G A+RT+SRL +K+ST
Sbjct: 182 YCSTRHSLSSCVIAEENGDMERDYAYTIGRAIDDLQSPEWVGEECARRTLSRLAPRKLST 241
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
K PV+F +A L I+G S+YRKSTFL+D+LG +I + I E PH+L
Sbjct: 242 MKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFLLDALGSQILPEWLTIEEHPHLLKGL 301
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
S+ FD+EGV+T++R ++K+G++ + L+ YSA+KLG+K+TG++GG H+ I
Sbjct: 302 ASTPFDSEGVRTERRDIIKDGVLTQWLLTNYSARKLGLKSTGHAGGIHNWRINGRGL--- 358
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+ ++LK+M TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L++
Sbjct: 359 -SFAKLLKEMGTGLVVTELMGQGVSGVTGDYSRGASGFWVENGEIQYPVSEITIAGNLKD 417
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ IV IG D+ TR++ GS+L+ M IAG+
Sbjct: 418 MWRNIVTIGDDIETRSNIQCGSVLLPEMKIAGQ 450
>gi|423106114|ref|ZP_17093815.1| protein pmbA [Klebsiella oxytoca 10-5242]
gi|376378322|gb|EHS91082.1| protein pmbA [Klebsiella oxytoca 10-5242]
Length = 450
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 168/453 (37%), Positives = 272/453 (60%), Gaps = 11/453 (2%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHS---SIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
K I ++ ++ ++ + A ++ A S + ++ G V R G+++ +E N+D
Sbjct: 6 KVISQVAQQRKTLEEAVTTALELAAGKSDGAEVSVSKTTGIGVSTRYGEVENVEFNSDGA 65
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +Y Q+ K G++S++D +++ T+ AA +IAR+T+ D AG+ D+ L
Sbjct: 66 LGITVYHQNRK----GSASSTDLSPQAIARTVQAALDIARYTSPDPCAGVADKELLAFEA 121
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D L+ P +S D+A +A R E A + I N E + + NSHG +
Sbjct: 122 PDLDLFHPAEVSPDEAIELASRAEQAALKADKRISNTEGGSFNSHYGIKVFGNSHGMLQS 181
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
Y ++H +S IA + +M+RD Y+ L PE +G A+RT+SRL +K+ST
Sbjct: 182 YCSTRHSLSSCVIAEENGDMERDYAYTIGRAIDDLQSPEWVGEECARRTLSRLAPRKLST 241
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
K PV+F +A L I+G S+YRKSTFL+D+LG +I + I E PH+L
Sbjct: 242 MKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFLLDALGSQILPDWLTIEEHPHLLKGL 301
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
S+ FD+EGV+T++R ++K+G++ + L+ YSA+KLG+K+TG++GG H+ I
Sbjct: 302 ASTPFDSEGVRTERRDIIKDGVLTQWLLTNYSARKLGLKSTGHAGGIHNWRINGRGL--- 358
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+ ++LK+M TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L++
Sbjct: 359 -SFAKLLKEMGTGLVVTELMGQGVSGVTGDYSRGASGFWVENGEIQYPVSEITIAGNLKD 417
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ IV IG D+ TR++ GS+L+ M IAG+
Sbjct: 418 MWRNIVTIGDDIETRSNIQCGSVLLPEMKIAGQ 450
>gi|117922065|ref|YP_871257.1| microcin-processing peptidase 1 [Shewanella sp. ANA-3]
gi|117614397|gb|ABK49851.1| microcin-processing peptidase 1. Unknown type peptidase. MEROPS
family U62 [Shewanella sp. ANA-3]
Length = 447
Score = 323 bits (829), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 167/434 (38%), Positives = 268/434 (61%), Gaps = 9/434 (2%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YA K+G + + + ++ G SV R +++ +E N D + + +Y +DG K G+SS
Sbjct: 21 LEYANKLGTNAAEVAISKQQGLSVSTRLKEVETVEFNKDGALGITVY-RDGCK---GSSS 76
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ + AA +IAR+T++D F+GL D+ + D KLY P +S D+ +
Sbjct: 77 TSDLSPEAIALAVKAADDIARYTSADPFSGLADKALMATEIRDLKLYYPEDISPDELAQL 136
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK- 204
A R E A + +S I N++ S + NSHGF++GY S++ +S S I
Sbjct: 137 AIRAETAALDADSRINNSDGASANAHTSVKVYGNSHGFLNGYCSSRYSLSCSVIGEDSDG 196
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
MQRD Y+ ++ PE +G A++T+SRL A+KI+T + P+L +A L+
Sbjct: 197 SMQRDYDYTIARKFSEMVSPESVGLKTAQKTVSRLGARKIATSRLPILLSPEIATGLIGH 256
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
ISG SLYRKS+FL+D++ +IF I E PH+LG+ S+++D+EGV TQ R ++
Sbjct: 257 LVGAISGGSLYRKSSFLLDAIHTQIFPDWFNIEEQPHLLGALASANYDSEGVATQDRRII 316
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
G+++ Y L++YSA+KLG+ TG++GG ++ + + + E++K M TGL+VTE
Sbjct: 317 DRGMLESYLLTSYSARKLGLTNTGHAGGIYNWTL----AHTGQSFDELVKGMGTGLIVTE 372
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
+MG G+N +TGDYS+GA G+++ENG++Q+ VEEITI+G L++MF+ I A+ D R+S
Sbjct: 373 VMGQGVNMVTGDYSRGAAGFYVENGEVQFPVEEITIAGNLKDMFRGIQAVSRDFDLRSSI 432
Query: 445 TSGSILIENMIIAG 458
+G IL+ M +AG
Sbjct: 433 RTGGILLSEMKVAG 446
>gi|375258625|ref|YP_005017795.1| peptidase PmbA [Klebsiella oxytoca KCTC 1686]
gi|397655578|ref|YP_006496280.1| TldE/PmbA protein [Klebsiella oxytoca E718]
gi|365908103|gb|AEX03556.1| peptidase PmbA [Klebsiella oxytoca KCTC 1686]
gi|394343143|gb|AFN29264.1| TldE/PmbA protein [Klebsiella oxytoca E718]
Length = 446
Score = 323 bits (829), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 168/453 (37%), Positives = 272/453 (60%), Gaps = 11/453 (2%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHS---SIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
K I ++ ++ ++ + A ++ A S + ++ G V R G+++ +E N+D
Sbjct: 2 KVISQVAQQRKTLEEAVTTALELAAGKSDGAEVSVSKTTGIGVSTRYGEVENVEFNSDGA 61
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +Y Q+ K G++S++D +++ T+ AA +IAR+T+ D AG+ D+ L
Sbjct: 62 LGITVYHQNRK----GSASSTDLSPQAIARTVQAALDIARYTSPDPCAGVADKELLAFEA 117
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D L+ P +S D+A +A R E A + I N E + + NSHG +
Sbjct: 118 PDLDLFHPAEVSPDEAIELASRAEQAALKADKRISNTEGGSFNSHYGIKVFGNSHGMLQS 177
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
Y ++H +S IA + +M+RD Y+ L PE +G A+RT+SRL +K+ST
Sbjct: 178 YCSTRHSLSSCVIAEENGDMERDYAYTIGRAIDDLQSPEWVGEECARRTLSRLAPRKLST 237
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
K PV+F +A L I+G S+YRKSTFL+D+LG +I + I E PH+L
Sbjct: 238 MKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFLLDALGSQILPDWLTIEEHPHLLKGL 297
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
S+ FD+EGV+T++R ++K+G++ + L+ YSA+KLG+K+TG++GG H+ I
Sbjct: 298 ASTPFDSEGVRTERRDIIKDGVLTQWLLTNYSARKLGLKSTGHAGGIHNWRINGRGL--- 354
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+ ++LK+M TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L++
Sbjct: 355 -SFAKLLKEMGTGLVVTELMGQGVSGVTGDYSRGASGFWVENGEIQYPVSEITIAGNLKD 413
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ IV IG D+ TR++ GS+L+ M IAG+
Sbjct: 414 MWRNIVTIGDDIETRSNIQCGSVLLPEMKIAGQ 446
>gi|418025668|ref|ZP_12664645.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS625]
gi|353534929|gb|EHC04494.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS625]
Length = 447
Score = 323 bits (829), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 169/434 (38%), Positives = 266/434 (61%), Gaps = 9/434 (2%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YA K+G + + + ++ G SV R +++ +E N D + + +Y +DG K G+SS
Sbjct: 21 LEYANKLGTNAAEVAISKQQGLSVSTRLKEVETVEFNKDGALGITVY-RDGCK---GSSS 76
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ + AA +IAR+T+ D F+GL D+ + D +LY P +S D+ +
Sbjct: 77 TSDLSPEAIALAVKAADDIARYTSPDPFSGLADKALMATQIRDLQLYYPEDISPDELAQL 136
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK- 204
A R E A + + I N++ S + NSHGF++GY S++ +S S I +
Sbjct: 137 AIRAETAALDADPRINNSDGASANAHTSVKVYGNSHGFLNGYCSSRYSLSCSVIGEDSEG 196
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
MQRD Y+ ++ PE +G A++T+SRL A+KI+T + P+L +A L+
Sbjct: 197 NMQRDYDYTIARKFSEMLAPETVGLKTAEKTVSRLGARKIATTRLPILLAPDIATGLIGH 256
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
F ISG SLYRKS+FL+DS+ +IF I E PH+LG+ S+++D+EGV TQ R ++
Sbjct: 257 FIGAISGGSLYRKSSFLLDSINTQIFPDWFNIEEQPHLLGALASANYDSEGVATQDRRII 316
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
G+++ Y L++YSA+KLG+ TG++GG ++ + + E++K M TGL+VTE
Sbjct: 317 DRGMLETYLLTSYSARKLGLTNTGHAGGIYNWTL----GHTGQTFDELVKDMGTGLIVTE 372
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
+MG G+N +TGDYS+GA G+++ENG+IQY VEEITI+G L+ MF+ + A+ D R+S
Sbjct: 373 VMGQGVNMVTGDYSRGAAGFYVENGEIQYPVEEITIAGNLKEMFRGVQAVSKDFDLRSSI 432
Query: 445 TSGSILIENMIIAG 458
+G IL+ M IAG
Sbjct: 433 RTGGILLSEMKIAG 446
>gi|188025686|ref|ZP_02959459.2| hypothetical protein PROSTU_01316 [Providencia stuartii ATCC 25827]
gi|188022739|gb|EDU60779.1| protein PmbA [Providencia stuartii ATCC 25827]
Length = 451
Score = 323 bits (829), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 165/445 (37%), Positives = 270/445 (60%), Gaps = 9/445 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ ++ L++AK + + N+ G SV R+G+++ +E N+D + + +Y
Sbjct: 16 RKNLEEAVARALHFAKSR-CDAAEVAVNKSTGISVSTRQGEVENVEFNSDGALGITVYHN 74
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K G++S++D +++ T+ AA +IAR+T+ D AG +++ L + D +L+
Sbjct: 75 QRK----GSASSTDLSPEAIERTVQAAVDIARYTSEDPCAGPAEKSLLAFDAPDLQLFQA 130
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
++ ++A +A + E A + IVN E + NSHG + Y S++ +
Sbjct: 131 SNITPEEAIKLASQAEMSALKVDPRIVNTEGGSFNGHYGVRVFGNSHGMLQSYCSSRYSM 190
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S IA + EM+RD Y+ L PE +G A+RT++RL +K+ T K PV+F
Sbjct: 191 SSCVIAEQNGEMERDYAYTIGRSLSALKSPEWVGQECARRTLARLSPRKLPTMKAPVIFA 250
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
A +A L ISG+S+YRKS+FL+DSLGK+I + I E PH++G SS FD+E
Sbjct: 251 AEVATGLFGHLVGAISGSSIYRKSSFLLDSLGKQILPDWLTITEQPHLIGGLASSPFDSE 310
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+T +R +++NG++Q + +++YSA+KLG+++TG++GG H+ I + + +LK
Sbjct: 311 GVRTTERNIIENGVLQTWLMTSYSARKLGLQSTGHAGGIHNWRIAGQGL----SFEALLK 366
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L++M+ IV I
Sbjct: 367 QMGTGLVVTELMGQGVSGITGDYSRGASGFWVENGEIQYPVSEITIAGNLKDMWANIVTI 426
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
D+ TR++ GS+L+ M IAG+
Sbjct: 427 ADDIETRSNIQCGSVLLPEMSIAGE 451
>gi|402840938|ref|ZP_10889398.1| protein PmbA [Klebsiella sp. OBRC7]
gi|402284605|gb|EJU33102.1| protein PmbA [Klebsiella sp. OBRC7]
Length = 446
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 168/453 (37%), Positives = 272/453 (60%), Gaps = 11/453 (2%)
Query: 10 KFIYSKSEFQQLAQDMLNYAKKIGASHS---SIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
K I ++ ++ ++ + A ++ A S + ++ G V R G+++ +E N+D
Sbjct: 2 KVISQVAQQRKTLEEAVTTALELAAGKSDGAEVSVSKTTGIGVSTRYGEVENVEFNSDGA 61
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
+ + +Y Q+ K G++S++D +++ T+ AA +IAR+T+ D AG+ D+ L
Sbjct: 62 LGITVYHQNRK----GSASSTDLSPQAIARTVQAALDIARYTSPDPCAGVADKELLAFEA 117
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D L+ P +S D+A +A R E A + I N E + + NSHG +
Sbjct: 118 PDLDLFHPAEVSPDEAIELASRAEQAALKADKRISNTEGGSFNSHYGIKVFGNSHGMLQS 177
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
Y ++H +S IA + +M+RD Y+ L PE +G A+RT+SRL +K+ST
Sbjct: 178 YCSTRHSLSSCVIAEENGDMERDYAYTIGRAIDDLQSPEWVGEECARRTLSRLAPRKLST 237
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
K PV+F +A L I+G S+YRKSTFL+D+LG +I + I E PH+L
Sbjct: 238 MKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFLLDALGSQILPDWLTIEEHPHLLKGL 297
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
S+ FD+EGV+T++R ++K+G++ + L+ YSA+KLG+K+TG++GG H+ I
Sbjct: 298 ASTPFDSEGVRTERRDIIKDGVLTQWLLTNYSARKLGLKSTGHAGGIHNWRI----NGCG 353
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+ ++LK+M TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L++
Sbjct: 354 LSFAKLLKEMGTGLVVTELMGQGVSGVTGDYSRGASGFWVENGEIQYPVSEITIAGNLKD 413
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ IV IG D+ TR++ GS+L+ M IAG+
Sbjct: 414 MWRNIVTIGDDIETRSNIQCGSVLLPEMKIAGQ 446
>gi|332163119|ref|YP_004299696.1| peptidase PmbA [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325667349|gb|ADZ43993.1| peptidase PmbA [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|330863512|emb|CBX73629.1| protein pmbA [Yersinia enterocolitica W22703]
Length = 446
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 173/455 (38%), Positives = 272/455 (59%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K ++ + +Q L A+ G+ + + ++ G SV R G+++ +E N+D
Sbjct: 1 MKVVTQVAEQRKTLEQAVAQALELARA-GSDAAEVAVSKTTGISVSTRFGEVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q K G++ST+D ++ T+ AA +IAR+T+ D +AG +++ L
Sbjct: 60 GALGITVYHQQRK----GSASTTDLNPDAVARTVQAALDIARYTSPDPYAGPAEKSLLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
+ D L+ P L + L+A R E A + I N E + + NSHG +
Sbjct: 116 DAPDLDLFHPSDLDAEQGILLAARAEQAALQADKRITNTEGGSFNSHYGIKVFGNSHGML 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S+H +S S IA +M+RD Y+ + L PE +G A+RT+SRL +K+
Sbjct: 176 QSYCSSRHSLSSSVIAEHNGDMERDYAYTIGRRMEDLASPEWVGEECARRTLSRLSPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
T + PVLF A +A L ISG ++YRKSTFL+D LGK+I + I E PH+L
Sbjct: 236 PTMQSPVLFAAEVATGLFGHLVSAISGGNIYRKSTFLLDHLGKQILPEWLTIEEHPHLLR 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+T +R +VK+G++Q Y L++YSA+KLG+++TG++GG H+ +
Sbjct: 296 GLASTPFDSEGVRTLQREIVKDGVLQTYLLTSYSARKLGLQSTGHAGGIHNWRV----AD 351
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ MLK+++ GL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L
Sbjct: 352 QGQDFAGMLKQLDKGLVVTELMGQGVSTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M + IV+IGSD+ TR++ GSIL+ M IAG+
Sbjct: 412 KDMLRNIVSIGSDIETRSNIQCGSILLPAMKIAGE 446
>gi|423204996|ref|ZP_17191552.1| hypothetical protein HMPREF1168_01187 [Aeromonas veronii AMC34]
gi|404624817|gb|EKB21635.1| hypothetical protein HMPREF1168_01187 [Aeromonas veronii AMC34]
Length = 447
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 179/443 (40%), Positives = 265/443 (59%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+ + + + L AK +GAS + + ++ G SV R +++ IE N D + + +Y +D
Sbjct: 12 AHLEAVVAEALEIAKGLGASLAEVSISKQTGLSVNTRGCELESIEFNKDGALGIAVY-RD 70
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
G K G+SST+D K ++ + AA IAR T++D+ AGL D L + D +L
Sbjct: 71 GCK---GSSSTTDLSKPAIRAAVEAAIEIARHTSADDCAGLADAEMLAWDAPDLQLCHQI 127
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L +A CE A ++ I +++ G ++ + NSHGF+ GY S++ +S
Sbjct: 128 ELDPRRGIELAIECERLALGRDARIKHSDGAGFSSHLGIKVYGNSHGFVKGYAASRNSLS 187
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD YSS+ L P+ I A +RT+SRL A+KISTR PVLF
Sbjct: 188 CVLIGEQDGDMQRDYGYSSSRTLDGLWSPQRIADEAVERTVSRLGARKISTRHAPVLFHP 247
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
A L ISG +LYRKS+FL+D LGK+I + I E PH+LG S+ FD EG
Sbjct: 248 DTASGLWGHLVMAISGGNLYRKSSFLLDKLGKQILPEWLTIQEFPHLLGGLASTPFDGEG 307
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V+T+ +++NG + + L++YSA+KLG+ TTG++GG H+ + + + + + MLK+
Sbjct: 308 VRTRDMDIIRNGELMSWLLTSYSARKLGLTTTGHAGGIHNWQV----SNTGQDFQGMLKE 363
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGLLVTELMG G+N + GDYS+GA G+W+ENG+I Y VEEITI+G L M IVA+G
Sbjct: 364 MGTGLLVTELMGQGVNIVNGDYSRGAAGFWVENGEIAYPVEEITIAGNLAEMISHIVAVG 423
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
D R+S +GS+L+ENM +AG
Sbjct: 424 CDEDERSSLKTGSVLVENMKLAG 446
>gi|51597832|ref|YP_072023.1| peptidase PmbA [Yersinia pseudotuberculosis IP 32953]
gi|153948749|ref|YP_001399419.1| peptidase PmbA [Yersinia pseudotuberculosis IP 31758]
gi|170022741|ref|YP_001719246.1| peptidase PmbA [Yersinia pseudotuberculosis YPIII]
gi|186897025|ref|YP_001874137.1| peptidase PmbA [Yersinia pseudotuberculosis PB1/+]
gi|51591114|emb|CAH22779.1| Putative modulator of DNA gyrase [Yersinia pseudotuberculosis IP
32953]
gi|152960244|gb|ABS47705.1| pmbA protein [Yersinia pseudotuberculosis IP 31758]
gi|169749275|gb|ACA66793.1| peptidase U62 modulator of DNA gyrase [Yersinia pseudotuberculosis
YPIII]
gi|186700051|gb|ACC90680.1| peptidase U62 modulator of DNA gyrase [Yersinia pseudotuberculosis
PB1/+]
Length = 446
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/455 (37%), Positives = 272/455 (59%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K ++ + +Q L A+ G+ + + ++ G SV R G+++ +E N+D
Sbjct: 1 MKVVTQVAEQRKTLEQAVAQALELARA-GSDAAEVAVSKTTGISVSTRFGEVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q K G++ST+D ++ T+ AA +IAR+T+ D +AG D++ L
Sbjct: 60 GALGITVYHQQRK----GSASTTDLNPDAVARTVQAALDIARYTSPDPYAGPADKSLLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
+ D L+ P L + L+A R E A + I N E + + NSHG +
Sbjct: 116 DAPDLDLFHPSDLDAEQGILLAARAEQAALQADKRITNTEGGSFNSHYGIKVFGNSHGML 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S+H +S S IA +M+RD Y+ + L PE +G A+RT+SRL +K+
Sbjct: 176 QSYCSSRHSLSSSVIAEHNGDMERDYAYTIGRRMEDLATPEWVGEECARRTLSRLSPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
T + PVLF A +A L ISG ++YRKSTFL+D LG++I + I E PH+L
Sbjct: 236 PTMQSPVLFAAEVATGLFGHLVSAISGGNIYRKSTFLLDHLGQQILPEWLTIEEHPHLLR 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+T +R +VK+G++Q Y L++YSA+KLG+++TG++GG H+ I
Sbjct: 296 GLASTPFDSEGVRTLQREIVKDGVLQTYLLTSYSARKLGLQSTGHAGGIHNWRIAGQ--- 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ MLK+++ GL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L
Sbjct: 353 -GQDFAGMLKQLDKGLVVTELMGQGVSTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M + IV++GSD+ TR++ GS+L+ M IAG+
Sbjct: 412 KDMLRNIVSVGSDIETRSNIQCGSVLLPVMKIAGE 446
>gi|386744151|ref|YP_006217330.1| peptidase PmbA [Providencia stuartii MRSN 2154]
gi|384480844|gb|AFH94639.1| peptidase PmbA [Providencia stuartii MRSN 2154]
Length = 446
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/445 (37%), Positives = 270/445 (60%), Gaps = 9/445 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ ++ L++AK + + N+ G SV R+G+++ +E N+D + + +Y
Sbjct: 11 RKNLEEAVARALHFAKSR-CDAAEVAVNKSTGISVSTRQGEVENVEFNSDGALGITVYHN 69
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K G++S++D +++ T+ AA +IAR+T+ D AG +++ L + D +L+
Sbjct: 70 QRK----GSASSTDLSPEAIERTVQAAVDIARYTSEDPCAGPAEKSLLAFDAPDLQLFQA 125
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
++ ++A +A + E A + IVN E + NSHG + Y S++ +
Sbjct: 126 SNITPEEAIKLASQAEMSALKVDPRIVNTEGGSFNGHYGVRVFGNSHGMLQSYCSSRYSM 185
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S IA + EM+RD Y+ L PE +G A+RT++RL +K+ T K PV+F
Sbjct: 186 SSCVIAEQNGEMERDYAYTIGRSLSALKSPEWVGQECARRTLARLSPRKLPTMKAPVIFA 245
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
A +A L ISG+S+YRKS+FL+DSLGK+I + I E PH++G SS FD+E
Sbjct: 246 AEVATGLFGHLVGAISGSSIYRKSSFLLDSLGKQILPDWLTITEQPHLIGGLASSPFDSE 305
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+T +R +++NG++Q + +++YSA+KLG+++TG++GG H+ I + + +LK
Sbjct: 306 GVRTTERNIIENGVLQTWLMTSYSARKLGLQSTGHAGGIHNWRIAGQGL----SFEALLK 361
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L++M+ IV I
Sbjct: 362 QMGTGLVVTELMGQGVSGITGDYSRGASGFWVENGEIQYPVSEITIAGNLKDMWANIVTI 421
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
D+ TR++ GS+L+ M IAG+
Sbjct: 422 ADDIETRSNIQCGSVLLPEMSIAGE 446
>gi|377579114|ref|ZP_09808086.1| PmbA protein [Escherichia hermannii NBRC 105704]
gi|377539576|dbj|GAB53251.1| PmbA protein [Escherichia hermannii NBRC 105704]
Length = 450
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 166/426 (38%), Positives = 257/426 (60%), Gaps = 8/426 (1%)
Query: 34 ASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKS 93
A + + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +
Sbjct: 33 ADGAEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPDA 88
Query: 94 LYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEA 153
+ T+ AA +IAR+T+ D AG+ D+ L + D L+ P + D A +A R E A
Sbjct: 89 IARTVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVDADRAIELAARAEEVA 148
Query: 154 FNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYS 213
+ I N E + + NSHG + Y ++H +S IA + +M+RD Y+
Sbjct: 149 LKADKRITNTEGGSFNSHYGIKVFGNSHGMLQSYCSTRHSLSSCVIAEQDGDMERDYAYT 208
Query: 214 SNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNS 273
+ L PE +G A+R +SRL +K+ST K PV+F +A L I+G +
Sbjct: 209 IGRAIEDLRSPEWVGEECAQRVLSRLAPRKLSTMKAPVIFAREVATGLFGHLVGAIAGGA 268
Query: 274 LYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYF 333
+YRKSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R +VK+G++Q +
Sbjct: 269 VYRKSTFLLDSLGKQILPEWLTIEEHPHLLKGLASTPFDSEGVRTERRDIVKDGVLQQWL 328
Query: 334 LSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYI 393
L+ YSA+KLG+ +TG++GG H+ I +LK+M TGL+VTELMG G++ I
Sbjct: 329 LTNYSARKLGLTSTGHAGGIHNWRINGRGL----GFDALLKEMGTGLVVTELMGQGVSGI 384
Query: 394 TGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIEN 453
TGDYS+GA G+W+ENG IQY V EITI+G L++M++ IV IG D+ TR++ GS+L+
Sbjct: 385 TGDYSRGAAGFWVENGVIQYPVSEITIAGNLKDMWRNIVTIGDDIETRSNIQCGSVLLPE 444
Query: 454 MIIAGK 459
M IAG+
Sbjct: 445 MKIAGQ 450
>gi|307249942|ref|ZP_07531914.1| Protein pmbA [Actinobacillus pleuropneumoniae serovar 4 str. M62]
gi|306858002|gb|EFM90086.1| Protein pmbA [Actinobacillus pleuropneumoniae serovar 4 str. M62]
Length = 449
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 174/445 (39%), Positives = 276/445 (62%), Gaps = 8/445 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + LN+AKK GA + + + G SV R + + IE NND ++ + +Y+
Sbjct: 13 EQELRQAVEFALNFAKKSGA-EAEVGVTKVAGLSVSTRLEQTENIEFNNDGSLGISVYV- 70
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
GK+ GN+STSD +S+ + +A IA++T+ D AGL D+ + D +LY
Sbjct: 71 -GKRK--GNASTSDLQPQSIQRAVESALAIAKYTSEDECAGLADKEMMAFEAPDLELYHQ 127
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+S++ A +A E+ A N + IVN+E + + N+HG + Y S++ +
Sbjct: 128 ADISVEQAVELALEAEHHALNADEKIVNSEGATFNSHSGVRVYGNTHGMLQSYLSSRYSL 187
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S I+ +++RD Y+ + + KL P+ +G AA + + RL +KI T + PV+F
Sbjct: 188 SCSVISAYEDQLERDYEYTISREFDKLQSPKWVGRQAAFKAVDRLNPQKIKTCEVPVIFY 247
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L+ A ISG +LYRKS+FL+D LG +I S I E PH+L SS+FD+E
Sbjct: 248 NDVATGLIGHLAGAISGGALYRKSSFLLDKLGTQILPSWFAISERPHLLRQLASSAFDSE 307
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV TQ R ++ +G++Q Y +++YSA+K+G+KTTG++GG H+ ++ N+T D L LK
Sbjct: 308 GVITQDREIITDGVLQTYLMTSYSARKMGLKTTGHAGGIHNWLVKPNRTGGLDTL---LK 364
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGLLVTE +G IN +TG+YS+GA G+W+ENG+IQY V EITI+G+LQ M+K ++A+
Sbjct: 365 EMGTGLLVTEFLGSAINAVTGEYSRGAAGFWVENGEIQYPVAEITIAGQLQEMYKNLIAV 424
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
D+ R++ +GSIL++ M I+G+
Sbjct: 425 ADDIEHRSNIQTGSILLDKMKISGE 449
>gi|53728745|ref|ZP_00135476.2| COG0312: Predicted Zn-dependent proteases and their inactivated
homologs [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
Length = 449
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 175/445 (39%), Positives = 277/445 (62%), Gaps = 8/445 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + LN+AKK GA + + + G SV R + + IE NND ++ + +Y+
Sbjct: 13 EQELRQAVEFALNFAKKSGA-EAEVGVTKVAGLSVSTRLEQTENIEFNNDGSLGISVYV- 70
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
GK+ GN+STSD +S+ + +A IA++T+ D AGL D+ + D +LY
Sbjct: 71 -GKRK--GNASTSDLQPQSIQRAVESALAIAKYTSEDECAGLADKEMMAFEAPDLELYHQ 127
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+SI+ A +A E+ A N + IVN+E + + N+HG + Y S++ +
Sbjct: 128 ADISIEQAVELALEAEHHALNADEKIVNSEGATFNSHSGVRVYGNTHGMLQSYLSSRYSL 187
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S I+ ++++RD Y+ + + KL P+ IG AA + + RL +KI T + PV+F
Sbjct: 188 SCSVISAYEEQLERDYEYTISREFDKLQSPKWIGRQAAFKAVDRLNPQKIKTCEVPVIFY 247
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L+ A ISG +LYRKS+FL+D LG +I S I E PH+L SS+FD+E
Sbjct: 248 NDVATGLIGHLAGAISGGALYRKSSFLLDKLGTQILPSWFAISERPHLLRQLASSAFDSE 307
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV TQ R ++ +G++Q Y +++YSA+K+G+KTTG++GG H+ ++ N+T D L LK
Sbjct: 308 GVITQDREIITDGVLQTYLMTSYSARKMGLKTTGHAGGIHNWLVKPNRTGGLDTL---LK 364
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M +GLLVTE +G IN +TG+YS+GA G+W+ENG+IQY V EITI+G+LQ M+K ++A+
Sbjct: 365 EMGSGLLVTEFLGSAINAVTGEYSRGAAGFWVENGEIQYPVAEITIAGQLQEMYKNLIAV 424
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
D+ R++ +GSIL++ M I+G+
Sbjct: 425 ADDIEHRSNIQTGSILLDKMKISGE 449
>gi|114564873|ref|YP_752387.1| C69 family peptidase [Shewanella frigidimarina NCIMB 400]
gi|114336166|gb|ABI73548.1| microcin-processing peptidase 1. Unknown type peptidase. MEROPS
family U62 [Shewanella frigidimarina NCIMB 400]
Length = 459
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 170/437 (38%), Positives = 271/437 (62%), Gaps = 15/437 (3%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YAK++G S + + ++ G SV R+ +++ +E N D + + IY +DG+K G+SS
Sbjct: 33 LEYAKELGTSAAEVAISKQQGLSVSTREKEVETVEFNKDGALGITIY-RDGRK---GSSS 88
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ + AA IA++T+ D F+GL D + + D +LY P + ++ +
Sbjct: 89 TSDLSPEAIRQAVKAADGIAKYTSEDPFSGLADPALMAQDIRDLELYHPQDIDAEELAQL 148
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE 205
A R E + + +S I N++ + + NSHGF++GY S++ S+S + I G+E
Sbjct: 149 AIRAEEASLSVDSRIRNSDGASANAHTAARVYGNSHGFLNGYCSSRY--SLSCVVI-GEE 205
Query: 206 ----MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFEL 261
MQRD Y+ L PE +G AA +T+SRL A+KI+T K PVLF +A L
Sbjct: 206 SDGNMQRDYDYTVARKYHDLLSPEAVGLQAANKTLSRLDARKIATAKMPVLFAPEIATGL 265
Query: 262 LNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKR 321
+ ISG+S+YRKS+FL+++L +IF I E PH++G+ S+++D+EGV TQ R
Sbjct: 266 MGHLIGAISGSSIYRKSSFLMEALNTQIFPDWFSIEEQPHLIGALASANYDSEGVATQDR 325
Query: 322 LVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLL 381
++ G ++ Y L++YSA+KL M TG++GG ++ + + S+ +++K MNTGL+
Sbjct: 326 RIIDRGQLETYLLTSYSARKLSMTNTGHAGGIYNWTL----SHSNQTFDDLVKAMNTGLI 381
Query: 382 VTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTR 441
VTE+MG G+N +TGDYS+GA G+++ENG++ Y VEEITI+G L++MF I +G D R
Sbjct: 382 VTEVMGQGVNGVTGDYSRGAAGFYVENGEVLYPVEEITIAGNLKDMFMGIQGVGKDRDLR 441
Query: 442 NSNTSGSILIENMIIAG 458
+S +G IL+ M IAG
Sbjct: 442 SSIRTGGILLSEMKIAG 458
>gi|422021717|ref|ZP_16368227.1| peptidase PmbA [Providencia sneebia DSM 19967]
gi|414098314|gb|EKT59963.1| peptidase PmbA [Providencia sneebia DSM 19967]
Length = 446
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 166/445 (37%), Positives = 272/445 (61%), Gaps = 9/445 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ + ++ + L +AK S + + N+ G SV R+G+++ +E N+D + + +Y
Sbjct: 11 RKKLEEAVEQALIFAKSRCDS-AEVAVNKSTGISVSTRQGEVENVEFNSDGALGITVYHN 69
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K G++S++D +++ T+ AA +IAR+T+ D+ AG D++ L D +L+
Sbjct: 70 QRK----GSASSTDLSPEAIERTVQAAVDIARYTSEDDCAGPADKSLLAFEAPDLQLFQA 125
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
L+ +DA +A R E A + + IVN+E + NSHG + Y S++ +
Sbjct: 126 SPLAPEDAIKLASRAEMAALSVDPRIVNSEGGSFNGHYGIRVFGNSHGMLQSYCSSRYSM 185
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S IA + EM+R+ Y+ L PE +G A+RT++ L +K+ T K PV+F
Sbjct: 186 SSCVIAEQDGEMERNYAYTIGRSLDSLQSPEWVGQECARRTLAHLSPRKLPTMKAPVIFA 245
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
A +A L ISG+S+YRKS+FL+DSLG++I + I E PH++G SS FD+E
Sbjct: 246 AEVATGLFGHLVGAISGSSIYRKSSFLLDSLGQQILPDWLTINEQPHLIGGLASSPFDSE 305
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+T +R +++NG++Q + +++YSA+KLG+++TG++GG H+ I + +LK
Sbjct: 306 GVRTTERNIIENGVLQTWLMTSYSARKLGLQSTGHAGGIHNWRIAGQGL----SFDALLK 361
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGL+VTELMG +N ITGDYS+GA G+W+ENG+IQY V EITI+G L++M++ +V I
Sbjct: 362 QMGTGLVVTELMGQSVNGITGDYSRGASGFWVENGEIQYPVSEITIAGNLKDMWRNMVTI 421
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
D+ TR++ GS+L+ M IAG+
Sbjct: 422 ADDIETRSNIQCGSVLLPEMSIAGQ 446
>gi|440761073|ref|ZP_20940171.1| TldE, PmbA protein, part of proposed TldE, TldD proteolytic complex
[Pantoea agglomerans 299R]
gi|436425261|gb|ELP23000.1| TldE, PmbA protein, part of proposed TldE, TldD proteolytic complex
[Pantoea agglomerans 299R]
Length = 446
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/441 (39%), Positives = 264/441 (59%), Gaps = 10/441 (2%)
Query: 19 QQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKK 78
Q +AQ L AK + + ++ G V R G+++ +E N+D + + +Y Q+ K
Sbjct: 16 QAIAQ-ALELAKA-STDSAEVAVSKTTGIGVSTRYGEVENVEFNSDGALGITVYHQNRK- 72
Query: 79 MFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLS 138
G++S++D ++ T+ AA +IAR+T+ D FAG D L + D LY PW +
Sbjct: 73 ---GSASSTDLSPDAIKRTVQAAIDIARYTSPDPFAGPADAELLAYDAPDLDLYHPWEID 129
Query: 139 IDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISP 198
D A +A + E + + I N E + + NSHG + Y S+H +S S
Sbjct: 130 ADRAIELAAQAEQASLRADKRITNTEGGSFNSHVGIKVFGNSHGMLQSYCSSRHSLSSSV 189
Query: 199 IAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLA 258
IA + M+RD Y+ + L PE +G A+RT+SRL +K+ T K PV+F + +A
Sbjct: 190 IAEQDGNMERDYAYTIGRAFEDLKSPEWVGAECARRTLSRLAPRKLPTMKAPVIFASEVA 249
Query: 259 FELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKT 318
L ISG S+YRKSTFL+DS+G++I + I E PH+L S+ FD+EGV+T
Sbjct: 250 TGLFGHLVGAISGGSVYRKSTFLLDSMGQQILPEWLTINEQPHLLKGLASTPFDSEGVRT 309
Query: 319 QKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNT 378
Q R ++K+G++Q + L++YSA+KLG+ +TG++GG H+ I + E+LK+M T
Sbjct: 310 QARDIIKDGVLQTWLLTSYSARKLGLTSTGHAGGIHNWRIAGQ----GHSFDELLKQMGT 365
Query: 379 GLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDV 438
GL+VTELMG G++ ITGDYS+GA G+W+ENG IQY V E+TI+G L+ M++ +V IG D+
Sbjct: 366 GLVVTELMGQGVSAITGDYSRGAAGFWVENGVIQYPVSEVTIAGNLKEMWRNMVTIGDDI 425
Query: 439 LTRNSNTSGSILIENMIIAGK 459
TR++ GS+L+ M IAG+
Sbjct: 426 ETRSNIQCGSVLLPEMKIAGQ 446
>gi|85713042|ref|ZP_01044079.1| Predicted inactivated Zn-dependent protease [Idiomarina baltica
OS145]
gi|85693145|gb|EAQ31106.1| Predicted inactivated Zn-dependent protease [Idiomarina baltica
OS145]
Length = 448
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 179/451 (39%), Positives = 268/451 (59%), Gaps = 15/451 (3%)
Query: 16 SEFQQLAQDM-------LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
SE QQ D+ L A K G S + ++ G SV R G ++ +E N D +
Sbjct: 6 SELQQQLDDVELAVQYALELAAKEGTSAAECSISKSAGISVGTRMGDVETVEFNQDGALG 65
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
+ +Y +D +K G++ST+D ++++ + A IAR+T++D F GL + + + +
Sbjct: 66 ISVY-RDHQK---GSASTTDLSREAIAAAVKKAAEIARYTSADPFNGLAPKELMTKDYPE 121
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
L P S + A A CE + I+N++ + + NSHGF+ GY
Sbjct: 122 LDLCHPGDQSAEYAIEQALACERHGLALDDRIINSDGAHYGSHTGFRVYGNSHGFLGGYL 181
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
S+H +S IA +G+ MQRD YS + L PE + AA+ T+SRL +KI T K
Sbjct: 182 QSRHNLSCVLIAKEGERMQRDMSYSVARRTQDLAAPEKVAEEAAQETLSRLGGRKIDTAK 241
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
PV+F A +A L F ISG +LYRKS+FL+D+LG+ + S + I E PHI+G S
Sbjct: 242 VPVIFRADVAGSLFGHFVSAISGGNLYRKSSFLLDALGQPVLPSWLNIKECPHIVGGLAS 301
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
S FD+EG+ T +R +V G +Q Y L++Y+A+K+ M+ TG++GG H+ + T +
Sbjct: 302 SPFDHEGLATIERDIVTAGELQTYLLTSYAARKMDMQPTGHAGGIHNWRL----THGDKS 357
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
L E+ K+M TGLLVTELMG G+N + GDYS+GA G+W+ENG+IQY VEE+TI+G L++M
Sbjct: 358 LAELCKQMGTGLLVTELMGQGVNLVNGDYSRGAAGFWVENGEIQYPVEEVTIAGNLKDML 417
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+DV R++ +GS+L+E M IAG+
Sbjct: 418 ANIVAIGNDVDERHALHTGSVLLEEMRIAGQ 448
>gi|373951097|ref|ZP_09611058.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS183]
gi|386323084|ref|YP_006019201.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica BA175]
gi|333817229|gb|AEG09895.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica BA175]
gi|373887697|gb|EHQ16589.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS183]
Length = 447
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/434 (38%), Positives = 266/434 (61%), Gaps = 9/434 (2%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YA K+G + + + ++ G SV R +++ +E N D + + +Y +DG K G+SS
Sbjct: 21 LEYANKLGTNAAEVAISKQQGLSVSTRLKEVETVEFNKDGALGITVY-RDGCK---GSSS 76
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ + AA +IAR+T+ D F+GL D+ + D +LY P +S D+ +
Sbjct: 77 TSDLSPEAIALAVKAADDIARYTSPDPFSGLADKALMATQIRDLQLYYPEDISPDELAQL 136
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK- 204
A R E A + + I N++ + + NSHGF++GY S++ +S S I +
Sbjct: 137 AIRAETAALDADPRINNSDGASANAHTAVKVYGNSHGFLNGYCSSRYSLSCSVIGEDSEG 196
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
MQRD Y+ ++ PE +G A++T+SRL A+KI+T + P+L +A L+
Sbjct: 197 NMQRDYDYTIARKFSEMLAPETVGLKTAEKTVSRLGARKIATTRLPILLAPDIATGLIGH 256
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
F ISG SLYRKS+FL+DS+ +IF I E PH+LG+ S+++D+EGV TQ R ++
Sbjct: 257 FIGAISGGSLYRKSSFLLDSINTQIFPDWFNIEEQPHLLGALASANYDSEGVSTQDRRII 316
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
G+++ Y L++YSA+KLG+ TG++GG ++ + + E++K M TGL+VTE
Sbjct: 317 DRGMLETYLLTSYSARKLGLTNTGHAGGIYNWTL----GHTGQTFDELVKDMGTGLIVTE 372
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
+MG G+N +TGDYS+GA G+++ENG+IQY VEEITI+G L+ MF+ + A+ D R+S
Sbjct: 373 VMGQGVNMVTGDYSRGAAGFYVENGEIQYPVEEITIAGNLKEMFRGVQAVSKDFDLRSSI 432
Query: 445 TSGSILIENMIIAG 458
+G IL+ M IAG
Sbjct: 433 RTGGILLSEMKIAG 446
>gi|420260161|ref|ZP_14762848.1| peptidase PmbA [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|404512375|gb|EKA26223.1| peptidase PmbA [Yersinia enterocolitica subsp. enterocolitica
WA-314]
Length = 446
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 173/455 (38%), Positives = 271/455 (59%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K ++ + +Q L A+ G+ + + ++ G SV R G+++ +E N+D
Sbjct: 1 MKVVTQVAEQRKTLEQAVAQALELARA-GSDAAEVAVSKTTGISVSTRFGEVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q K G++ST+D ++ T+ AA +IAR+T+ D +AG +++ L
Sbjct: 60 GALGITVYHQQRK----GSASTTDLNPDAVARTVQAALDIARYTSPDPYAGPAEKSLLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
+ D L+ P L + L+A R E A + I N E + + NSHG +
Sbjct: 116 DAPDLDLFHPSDLDAEQGILLAARAEQAALQADKRITNTEGGSFNSHYGIKVFGNSHGML 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S+H +S S IA +M+RD Y+ + L PE +G A+RT+SRL +K+
Sbjct: 176 QSYCSSRHSLSSSVIAEHNGDMERDYAYTIGRRMEDLASPEWVGEECARRTLSRLSPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
T + PVLF A +A L ISG ++YRKSTFL+D LGK+I + I E PH+L
Sbjct: 236 PTMQSPVLFAAEVATGLFGHLVSAISGGNIYRKSTFLLDHLGKQILPEWLTIEEHPHLLR 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+T +R +VK+G++Q Y L++YSA+KLG+ +TG++GG H+ +
Sbjct: 296 GLASTPFDSEGVRTLQREIVKDGVLQTYLLTSYSARKLGLHSTGHAGGIHNWRVAGQ--- 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ MLK+++ GL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L
Sbjct: 353 -GQDFAGMLKQLDKGLVVTELMGQGVSTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M + IV+IGSD+ TR++ GSIL+ M IAG+
Sbjct: 412 KDMLRNIVSIGSDIETRSNIQCGSILLPAMKIAGE 446
>gi|421182531|ref|ZP_15640006.1| PmbA protein [Pseudomonas aeruginosa E2]
gi|404541848|gb|EKA51193.1| PmbA protein [Pseudomonas aeruginosa E2]
Length = 449
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/443 (38%), Positives = 268/443 (60%), Gaps = 8/443 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
+ ++ + ++ A+ GAS + + G S VR+G+++ +E N D+ + +Y
Sbjct: 15 DLREQVEQIIAEARCQGASACEVAVSLEQGLSTSVRQGEVETVEFNRDQGFGITLYAGQR 74
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS + ++ +T+ AA IAR T+ D AGL D + + LY PW
Sbjct: 75 K----GSASTSATGEAAIRETVAAALAIARHTSEDECAGLADAALMARELPELDLYHPWS 130
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
LS + A A CE AF + + + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 LSPEQAVERALACEAAAFAADKRVTKADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSC 190
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L E IG AA+R SRL A+ + T + PVLF
Sbjct: 191 VMIAEGEGQMQRDYWYDVNRRGEALASAESIGRRAAERAASRLGARPVQTAEVPVLFAPE 250
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
+A L F ISG SLYRKS+FL +LG+++F + I E PH++G+ GS+SFD++G+
Sbjct: 251 IAVGLFGHFLGAISGGSLYRKSSFLEGALGQRLFPEWLSIDERPHLVGALGSASFDSDGL 310
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+NG + Y L TYS +KLG+ +T N+GG H+L + + ++ ++++M
Sbjct: 311 ATYAKPFVENGELVSYVLGTYSGRKLGLPSTANAGGVHNLFV----SHGDEDQAALIRRM 366
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ+ V+E+TI+ L+++F++IVA+G
Sbjct: 367 GRGLLVTELMGQGVNLVTGDYSRGAAGYWVENGEIQFPVQEVTIAANLRDLFRRIVAVGK 426
Query: 437 DVLTRNSNTSGSILIENMIIAGK 459
D+ R + +GS+L+E+M++AG+
Sbjct: 427 DIERRGNLHTGSVLVESMMVAGR 449
>gi|153840378|ref|ZP_01993045.1| PmbA protein [Vibrio parahaemolyticus AQ3810]
gi|260900298|ref|ZP_05908693.1| PmbA protein [Vibrio parahaemolyticus AQ4037]
gi|149745958|gb|EDM57088.1| PmbA protein [Vibrio parahaemolyticus AQ3810]
gi|308107553|gb|EFO45093.1| PmbA protein [Vibrio parahaemolyticus AQ4037]
Length = 447
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/447 (38%), Positives = 267/447 (59%), Gaps = 12/447 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
++E +Q L A + + + + G SV R G ++ +E N+D + + +Y
Sbjct: 11 RTELEQAVARALELASA-KSDAAEVAITKSTGLSVSTRMGDVENVEFNSDGALGITVY-- 67
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYT 133
+ G++STSD + ++ T+NAA +IA +T+ D FAG P E ++ P D L+
Sbjct: 68 --RGQRKGSASTSDLSEAAIEQTVNAALDIAHYTSEDPFAGPAPKEFMVKEVP-DLDLFH 124
Query: 134 PWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHI 193
P D A +A E EA +++ I ++ + + NSHG ++ Y S+H
Sbjct: 125 PDSPDPDYAAQVAIAAEKEALSYSDAIKQSDGASYDSHYGVKVYGNSHGLLASYASSRHS 184
Query: 194 ISISPIAI-KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252
S I + K EM+RD Y+ L PE +G AA+ T+SRL A+++ T + P++
Sbjct: 185 TSCCVIGVGKNGEMERDYSYTVARHRDDLWTPETVGRKAAENTVSRLDAQRLKTGQYPIM 244
Query: 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFD 312
F A +A L+ ISG +LYRKS+FL+D LGK++ I E PH+L SS FD
Sbjct: 245 FAADVATGLIGHLVMAISGGNLYRKSSFLLDHLGKQVLPEWFNISERPHVLRGLASSPFD 304
Query: 313 NEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEM 372
+EGV TQ R ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S + N ++M
Sbjct: 305 SEGVYTQDREIITDGVLATYLLTSYAARKMKMDPTGHAGGIHNWYVKS----TGQNFEQM 360
Query: 373 LKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIV 432
LK++ TGLLVTE+MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MF +IV
Sbjct: 361 LKELGTGLLVTEVMGQGVNVVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFTKIV 420
Query: 433 AIGSDVLTRNSNTSGSILIENMIIAGK 459
A+GSD+ TR+ +GSIL++ M +AG+
Sbjct: 421 AVGSDIETRSQIQTGSILLDTMKVAGE 447
>gi|365846324|ref|ZP_09386828.1| protein PmbA [Yokenella regensburgei ATCC 43003]
gi|364574042|gb|EHM51515.1| protein PmbA [Yokenella regensburgei ATCC 43003]
Length = 450
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 163/423 (38%), Positives = 259/423 (61%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPEAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ +++ L N D L+ P +S D+A +A R E +
Sbjct: 92 TVQAALDIARYTSPDPCAGVAEKSLLAFNAPDLDLFHPAEISPDEAIELAARAEQASLKA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + Y ++H +S IA +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGIKVFGNSHGMLQSYCSTRHSLSSCVIAEHDGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT++RL +K+ST K PV+F +A L I+G ++YR
Sbjct: 212 AMGDLQTPEWVGEECARRTLARLSPRKLSTMKAPVIFAPEVATGLFGHLVGAIAGGAVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV T +R +VK+GI+ + L+
Sbjct: 272 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASTPFDSEGVATTRRDIVKDGILTQWLLTN 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+++TG++GG H+ I +++LK+M TGL+VTELMG G++ +TGD
Sbjct: 332 YSARKLGLQSTGHAGGIHNWRIAGRGL----GFEKLLKEMGTGLVVTELMGQGVSGVTGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV I D+ TR++ GS+L+ M I
Sbjct: 388 YSRGASGFWVENGEIQYPVSEITIAGNLKDMWRNIVTIADDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|238758341|ref|ZP_04619519.1| Protein pmbA [Yersinia aldovae ATCC 35236]
gi|238703464|gb|EEP96003.1| Protein pmbA [Yersinia aldovae ATCC 35236]
Length = 446
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 173/455 (38%), Positives = 271/455 (59%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K ++ + +Q L A+ G+ + + ++ G SV R G+++ +E N+D
Sbjct: 1 MKVVTQVAEQRKTLEQAVAQALELARA-GSDAAEVAVSKTTGISVSTRFGEVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q K G++ST+D ++ T+ AA +IAR+T+ D FAG +++ L
Sbjct: 60 GALGITVYHQQRK----GSASTTDLNPDAVARTVQAALDIARYTSPDPFAGPAEKSLLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
D L+ P L + ++A R E A + I N E + + NSHG +
Sbjct: 116 EAPDLDLFHPSDLDAEQGIVLAARAEQAALQADKRITNTEGGSFNSHYGIKVFGNSHGML 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S+H +S S IA +M+RD Y+ + L PE +G A+RT+SRL +K+
Sbjct: 176 QSYCSSRHSLSSSVIAEHNGDMERDYAYTIGRRMEDLASPEWVGAECARRTLSRLSPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
T + PVLF A +A L ISG ++YRKSTFL+D LGK+I + I E PH+L
Sbjct: 236 PTMQSPVLFAAEVATGLFGHLVSAISGGNIYRKSTFLLDHLGKQILPEWLIIEEHPHLLR 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+T +R +VK+G++Q Y L++YSA+KLG+++TG++GG H+ I
Sbjct: 296 GLASTPFDSEGVRTVQREIVKDGVLQTYLLTSYSARKLGLQSTGHAGGIHNWRIAGQ--- 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ MLK+++ GL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L
Sbjct: 353 -GQDFAGMLKQLDKGLVVTELMGQGVSTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M + IV++GSD+ TR++ GSIL+ M IAG+
Sbjct: 412 KDMLRNIVSVGSDIETRSNIQCGSILLPAMKIAGE 446
>gi|160873655|ref|YP_001552971.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS195]
gi|160859177|gb|ABX47711.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS195]
Length = 461
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/434 (38%), Positives = 266/434 (61%), Gaps = 9/434 (2%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YA K+G + + + ++ G SV R +++ +E N D + + +Y +DG K G+SS
Sbjct: 35 LEYANKLGTNAAEVAISKQQGLSVSTRLKEVETVEFNKDGALGITVY-RDGCK---GSSS 90
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ + AA +IAR+T+ D F+GL D+ + D +LY P +S D+ +
Sbjct: 91 TSDLSPEAIALAVKAADDIARYTSPDPFSGLADKALMATQIRDLQLYYPEDISPDELAQL 150
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK- 204
A R E A + + I N++ + + NSHGF++GY S++ +S S I +
Sbjct: 151 AIRAETAALDADPRINNSDGASANAHTAVKVYGNSHGFLNGYCSSRYSLSCSVIGEDSEG 210
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
MQRD Y+ ++ PE +G A++T+SRL A+KI+T + P+L +A L+
Sbjct: 211 NMQRDYDYTIARKFSEMLAPETVGLKTAEKTVSRLGARKIATTRLPILLAPDIATGLIGH 270
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
F ISG SLYRKS+FL+DS+ +IF I E PH+LG+ S+++D+EGV TQ R ++
Sbjct: 271 FIGAISGGSLYRKSSFLLDSINTQIFPDWFNIEEQPHLLGALASANYDSEGVSTQNRRII 330
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
G+++ Y L++YSA+KLG+ TG++GG ++ + + E++K M TGL+VTE
Sbjct: 331 DRGMLETYLLTSYSARKLGLTNTGHAGGIYNWTL----GHTGQTFDELVKDMGTGLIVTE 386
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
+MG G+N +TGDYS+GA G+++ENG+IQY VEEITI+G L+ MF+ + A+ D R+S
Sbjct: 387 VMGQGVNMVTGDYSRGAAGFYVENGEIQYPVEEITIAGNLKEMFRGVQAVSKDFDLRSSI 446
Query: 445 TSGSILIENMIIAG 458
+G IL+ M IAG
Sbjct: 447 RTGGILLSEMKIAG 460
>gi|378706896|ref|YP_005271790.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS678]
gi|315265885|gb|ADT92738.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS678]
Length = 447
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/434 (38%), Positives = 266/434 (61%), Gaps = 9/434 (2%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YA K+G + + + ++ G SV R +++ +E N D + + +Y +DG K G+SS
Sbjct: 21 LEYANKLGTNAAEVAISKQQGLSVSTRLKEVETVEFNKDGALGITVY-RDGCK---GSSS 76
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ + AA +IAR+T+ D F+GL D+ + D +LY P +S D+ +
Sbjct: 77 TSDLSPEAIALAVKAADDIARYTSPDPFSGLADKALMATQIRDLQLYYPEDISPDELAQL 136
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK- 204
A R E A + + I N++ + + NSHGF++GY S++ +S S I +
Sbjct: 137 AIRAETAALDADPRINNSDGASANAHTAVKVYGNSHGFLNGYCSSRYSLSCSVIGEDSEG 196
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
MQRD Y+ ++ PE +G A++T+SRL A+KI+T + P+L +A L+
Sbjct: 197 NMQRDYDYTIARKFSEMLAPETVGLKTAEKTVSRLGARKIATTRLPILLAPDIATGLIGH 256
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
F ISG SLYRKS+FL+DS+ +IF I E PH+LG+ S+++D+EGV TQ R ++
Sbjct: 257 FIGAISGGSLYRKSSFLLDSINTQIFPDWFNIEEQPHLLGALASANYDSEGVSTQNRRII 316
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
G+++ Y L++YSA+KLG+ TG++GG ++ + + E++K M TGL+VTE
Sbjct: 317 DRGMLETYLLTSYSARKLGLTNTGHAGGIYNWTL----GHTGQTFDELVKDMGTGLIVTE 372
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
+MG G+N +TGDYS+GA G+++ENG+IQY VEEITI+G L+ MF+ + A+ D R+S
Sbjct: 373 VMGQGVNMVTGDYSRGAAGFYVENGEIQYPVEEITIAGNLKEMFRGVQAVSKDFDLRSSI 432
Query: 445 TSGSILIENMIIAG 458
+G IL+ M IAG
Sbjct: 433 RTGGILLSEMKIAG 446
>gi|152999062|ref|YP_001364743.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS185]
gi|151363680|gb|ABS06680.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS185]
Length = 461
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/434 (38%), Positives = 266/434 (61%), Gaps = 9/434 (2%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YA K+G + + + ++ G SV R +++ +E N D + + +Y +DG K G+SS
Sbjct: 35 LEYANKLGTNAAEVAISKQQGLSVSTRLKEVETVEFNKDGALGITVY-RDGCK---GSSS 90
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ + AA +IAR+T+ D F+GL D+ + D +LY P +S D+ +
Sbjct: 91 TSDLSPEAIALAVKAADDIARYTSPDPFSGLADKALMATQIRDLQLYYPEDISPDELAQL 150
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK- 204
A R E A + + I N++ + + NSHGF++GY S++ +S S I +
Sbjct: 151 AIRAETAALDADPRINNSDGASANAHTAVKVYGNSHGFLNGYCSSRYSLSCSVIGEDSEG 210
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
MQRD Y+ ++ PE +G A++T+SRL A+KI+T + P+L +A L+
Sbjct: 211 NMQRDYDYTIARKFNEMLAPETVGLKTAEKTVSRLGARKIATTRLPILLAPDIATGLIGH 270
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
F ISG SLYRKS+FL+DS+ +IF I E PH+LG+ S+++D+EGV TQ R ++
Sbjct: 271 FIGAISGGSLYRKSSFLLDSINTQIFPDWFNIEEQPHLLGALASANYDSEGVSTQDRRII 330
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
G+++ Y L++YSA+KLG+ TG++GG ++ + + E++K M TGL+VTE
Sbjct: 331 DRGMLETYLLTSYSARKLGLTNTGHAGGIYNWTL----GHTGQTFDELVKDMGTGLIVTE 386
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
+MG G+N +TGDYS+GA G+++ENG+IQY VEEITI+G L+ MF+ + A+ D R+S
Sbjct: 387 VMGQGVNMVTGDYSRGAAGFYVENGEIQYPVEEITIAGNLKEMFRGVQAVSKDFDLRSSI 446
Query: 445 TSGSILIENMIIAG 458
+G IL+ M IAG
Sbjct: 447 RTGGILLSEMKIAG 460
>gi|386342751|ref|YP_006039117.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS117]
gi|334865152|gb|AEH15623.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS117]
Length = 447
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/434 (38%), Positives = 266/434 (61%), Gaps = 9/434 (2%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YA K+G + + + ++ G SV R +++ +E N D + + +Y +DG K G+SS
Sbjct: 21 LEYANKLGTNAAEVAISKQQGLSVSTRLKEVETVEFNKDGALGITVY-RDGCK---GSSS 76
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ + AA +IAR+T+ D F+GL D+ + D +LY P +S D+ +
Sbjct: 77 TSDLSPEAIALAVKAADDIARYTSPDPFSGLADKALMASQIRDLQLYYPEDISPDELAQL 136
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK- 204
A R E A + + I N++ + + NSHGF++GY S++ +S S I +
Sbjct: 137 AIRAETAALDADPRINNSDGASANAHTAVKVYGNSHGFLNGYCSSRYSLSCSVIGEDSEG 196
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
MQRD Y+ ++ PE +G A++T+SRL A+KI+T + P+L +A L+
Sbjct: 197 NMQRDYDYTIARKFSEMLAPETVGLKTAEKTVSRLGARKIATTRLPILLAPDIATGLIGH 256
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
F ISG SLYRKS+FL+DS+ +IF I E PH+LG+ S+++D+EGV TQ R ++
Sbjct: 257 FIGAISGGSLYRKSSFLLDSINTQIFPDWFNIEEQPHLLGALASANYDSEGVSTQDRRII 316
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
G+++ Y L++YSA+KLG+ TG++GG ++ + + E++K M TGL+VTE
Sbjct: 317 DRGMLETYLLTSYSARKLGLTNTGHAGGIYNWTL----GHTGQTFDELVKDMGTGLIVTE 372
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
+MG G+N +TGDYS+GA G+++ENG+IQY VEEITI+G L+ MF+ + A+ D R+S
Sbjct: 373 VMGQGVNMVTGDYSRGAAGFYVENGEIQYPVEEITIAGNLKEMFRGVQAVSKDFDLRSSI 432
Query: 445 TSGSILIENMIIAG 458
+G IL+ M IAG
Sbjct: 433 RTGGILLSEMKIAG 446
>gi|126175996|ref|YP_001052145.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS155]
gi|125999201|gb|ABN63276.1| microcin-processing peptidase 1. Unknown type peptidase. MEROPS
family U62 [Shewanella baltica OS155]
Length = 461
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/434 (38%), Positives = 266/434 (61%), Gaps = 9/434 (2%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YA K+G + + + ++ G SV R +++ +E N D + + +Y +DG K G+SS
Sbjct: 35 LEYANKLGTNAAEVAISKQQGLSVSTRLKEVETVEFNKDGALGITVY-RDGCK---GSSS 90
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ + AA +IAR+T+ D F+GL D+ + D +LY P +S D+ +
Sbjct: 91 TSDLSPEAIALAVKAADDIARYTSPDPFSGLADKALMASQIRDLQLYYPEDISPDELAQL 150
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK- 204
A R E A + + I N++ + + NSHGF++GY S++ +S S I +
Sbjct: 151 AIRAETAALDADPRINNSDGASANAHTAVKVYGNSHGFLNGYCSSRYSLSCSVIGEDSEG 210
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
MQRD Y+ ++ PE +G A++T+SRL A+KI+T + P+L +A L+
Sbjct: 211 NMQRDYDYTIARKFSEMLAPETVGLKTAEKTVSRLGARKIATTRLPILLAPDIATGLIGH 270
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
F ISG SLYRKS+FL+DS+ +IF I E PH+LG+ S+++D+EGV TQ R ++
Sbjct: 271 FIGAISGGSLYRKSSFLLDSINTQIFPDWFNIEEQPHLLGALASANYDSEGVSTQDRRII 330
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
G+++ Y L++YSA+KLG+ TG++GG ++ + + E++K M TGL+VTE
Sbjct: 331 DRGMLETYLLTSYSARKLGLTNTGHAGGIYNWTL----GHTGQTFDELVKDMGTGLIVTE 386
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
+MG G+N +TGDYS+GA G+++ENG+IQY VEEITI+G L+ MF+ + A+ D R+S
Sbjct: 387 VMGQGVNMVTGDYSRGAAGFYVENGEIQYPVEEITIAGNLKEMFRGVQAVSKDFDLRSSI 446
Query: 445 TSGSILIENMIIAG 458
+G IL+ M IAG
Sbjct: 447 RTGGILLSEMKIAG 460
>gi|165976145|ref|YP_001651738.1| antibiotic maturation factor PmbA [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|307245589|ref|ZP_07527675.1| Protein pmbA [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|307254545|ref|ZP_07536379.1| Protein pmbA [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|307256752|ref|ZP_07538531.1| Protein pmbA [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
gi|307258999|ref|ZP_07540730.1| Protein pmbA [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
gi|165876246|gb|ABY69294.1| antibiotic maturation factor PmbA [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|306853291|gb|EFM85510.1| Protein pmbA [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|306862482|gb|EFM94442.1| Protein pmbA [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|306864800|gb|EFM96704.1| Protein pmbA [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
gi|306867023|gb|EFM98880.1| Protein pmbA [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
Length = 449
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/445 (39%), Positives = 276/445 (62%), Gaps = 8/445 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + LN+AKK GA + + + G SV R + + IE NND ++ + +Y+
Sbjct: 13 EQELRQAVEFALNFAKKSGA-EAEVGVTKVAGLSVSTRLEQTENIEFNNDGSLGISVYV- 70
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
GK+ GN+STSD +S+ + +A IA++T+ D AGL D+ + D +LY
Sbjct: 71 -GKRK--GNASTSDLQPQSIQRAVESALAIAKYTSEDECAGLADKEMMAFEAPDLELYHQ 127
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+SI+ A +A E+ A N + IVN+E + + N+HG + Y S++ +
Sbjct: 128 ADISIEQAVELALEAEHHALNADEKIVNSEGATFNSHSGVRVYGNTHGMLQSYLSSRYSL 187
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S I+ +++RD Y+ + + KL P+ IG AA + + RL +KI T + PV+F
Sbjct: 188 SCSVISAYEDQLERDYEYTISREFDKLQSPKWIGRQAAFKAVDRLNPQKIKTCEVPVIFY 247
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L+ A ISG +LYRKS+FL+D LG +I S I E PH+L SS+FD+E
Sbjct: 248 NDVATGLIGHLAGAISGGALYRKSSFLLDKLGTQILPSWFAISERPHLLRQLASSAFDSE 307
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV TQ R ++ +G++Q Y +++YSA+K+G+KTTG++GG H+ ++ N+T D L LK
Sbjct: 308 GVITQDREIITDGVLQTYLMTSYSARKMGLKTTGHAGGIHNWLVKPNRTGGLDTL---LK 364
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M +GLLVTE +G IN +TG+YS+GA G+W+ENG+IQY V EITI+G+LQ M+K ++A+
Sbjct: 365 EMGSGLLVTEFLGSAINAVTGEYSRGAAGFWVENGEIQYPVAEITIAGQLQEMYKNLIAV 424
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
D+ R++ +GSIL++ M I+G+
Sbjct: 425 ADDIEHRSNIQTGSILLDKMKISGE 449
>gi|386310128|ref|YP_006006184.1| TldE/PmbA protein [Yersinia enterocolitica subsp. palearctica Y11]
gi|418242241|ref|ZP_12868756.1| peptidase PmbA [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|433550783|ref|ZP_20506826.1| TldE protein, part of TldE/TldD proteolytic complex [Yersinia
enterocolitica IP 10393]
gi|318603998|emb|CBY25496.1| tlde/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Yersinia enterocolitica subsp.
palearctica Y11]
gi|351778378|gb|EHB20537.1| peptidase PmbA [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|431787882|emb|CCO69866.1| TldE protein, part of TldE/TldD proteolytic complex [Yersinia
enterocolitica IP 10393]
Length = 446
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 173/455 (38%), Positives = 271/455 (59%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K ++ + +Q L A+ G+ + + ++ G SV R G+++ +E N+D
Sbjct: 1 MKVVTQVAEQRKTLEQAVAQALELARA-GSDAAEVAVSKTTGISVSTRFGEVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q K G++ST+D ++ T+ AA +IAR+T+ D +AG +++ L
Sbjct: 60 GALGITVYHQQRK----GSASTTDLNPDAVARTVQAALDIARYTSPDPYAGPAEKSLLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
+ D L P L + L+A R E A + I N E + + NSHG +
Sbjct: 116 DAPDLDLLHPSDLDAEQGILLAARAEQAALQADKRITNTEGGSFNSHYGIKVFGNSHGML 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S+H +S S IA +M+RD Y+ + L PE +G A+RT+SRL +K+
Sbjct: 176 QSYCSSRHSLSSSVIAEHNGDMERDYAYTIGRRMEDLASPEWVGEECARRTLSRLSPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
T + PVLF A +A L ISG ++YRKSTFL+D LGK+I + I E PH+L
Sbjct: 236 PTMQSPVLFAAEVATGLFGHLVSAISGGNIYRKSTFLLDHLGKQILPEWLTIEEHPHLLR 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+T +R +VK+G++Q Y L++YSA+KLG+++TG++GG H+ +
Sbjct: 296 GLASTPFDSEGVRTLQREIVKDGVLQTYLLTSYSARKLGLQSTGHAGGIHNWRVAGQ--- 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ MLK+++ GL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L
Sbjct: 353 -GQDFAGMLKQLDKGLVVTELMGQGVSTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M + IV+IGSD+ TR++ GSIL+ M IAG+
Sbjct: 412 KDMLRNIVSIGSDIETRSNIQCGSILLPAMKIAGE 446
>gi|303252352|ref|ZP_07338518.1| antibiotic maturation factor PmbA [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307247709|ref|ZP_07529747.1| Protein pmbA [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
gi|302648811|gb|EFL79001.1| antibiotic maturation factor PmbA [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306855739|gb|EFM87904.1| Protein pmbA [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
Length = 449
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/445 (39%), Positives = 276/445 (62%), Gaps = 8/445 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + LN+AKK GA + + + G SV R + + IE NND ++ + +Y+
Sbjct: 13 EQELRQAVEFALNFAKKSGA-EAEVGVTKVAGLSVSTRLEQTENIEFNNDGSLGISVYV- 70
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
GK+ GN+STSD +S+ + +A IA++T+ D AGL D+ + D +LY
Sbjct: 71 -GKRK--GNASTSDLQPQSIQRAVESALAIAKYTSEDECAGLADKEMMAFEAPDLELYHQ 127
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+S++ A +A E+ A N + IVN+E + + N+HG + Y S++ +
Sbjct: 128 ADISVEQAVELALEAEHHALNTDEKIVNSEGATFNSHSGVRVYGNTHGMLQSYLSSRYSL 187
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S I+ +++RD Y+ + + KL P+ IG AA + + RL +KI T + PV+F
Sbjct: 188 SCSVISAYEDQLERDYEYTISREFDKLQSPKWIGRQAAFKAVDRLNPQKIKTCEVPVVFY 247
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L+ A ISG +LYRKS+FL+D LG +I S I E PH+L SS+FD+E
Sbjct: 248 NDVATGLIGHLAGAISGGALYRKSSFLLDKLGTQILPSWFAISERPHLLRQLASSAFDSE 307
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV TQ R +V +G++Q Y +++YSA+K+G+KTTG++GG H+ ++ N+T D L LK
Sbjct: 308 GVITQDREIVTDGVLQTYLMTSYSARKMGLKTTGHAGGIHNWLVKPNRTGGLDTL---LK 364
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M +GLLVTE +G IN +TG+YS+GA G+W+ENG+IQY V EITI+G+LQ M+K ++A+
Sbjct: 365 EMGSGLLVTEFLGSAINAVTGEYSRGAAGFWVENGEIQYPVAEITIAGQLQEMYKNLIAV 424
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
D+ R++ +GSIL++ M I+G+
Sbjct: 425 ADDIEHRSNIQTGSILLDKMKISGE 449
>gi|443468355|ref|ZP_21058585.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Pseudomonas pseudoalcaligenes KF707]
gi|442897472|gb|ELS24414.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Pseudomonas pseudoalcaligenes KF707]
Length = 448
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 173/442 (39%), Positives = 265/442 (59%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E Q + +L A++ GAS + + G S VR+G ++ +E N D+ + +Y+
Sbjct: 14 ELQARVERILAEARRQGASACEVAVSVEQGLSTTVREGDVETVEFNRDQGFGITLYVGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++++ +T+ AA IA+ + D AGL D + + D LY PW
Sbjct: 74 K----GSASTSATGEEAIRETVAAALAIAKHASEDECAGLADAALMARDLPDLDLYHPWS 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
+S + A A CE AF + + + T + T + + NSHGF+ GY ++H +S
Sbjct: 130 ISPEQAVEQALLCEAAAFATDPRVTKADGTTLNTHRGCRVYGNSHGFVGGYASTRHSLSC 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N ++L P IG AA+R+ +RL A+ + T + PVLF
Sbjct: 190 VMIAEAQGQMQRDYWYDVNRIGEQLADPASIGRRAAERSAARLGARPVPTCEVPVLFAPE 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L F ISG +LYRKS+FL +LG+++F + I E P I + S++FDN+G+
Sbjct: 250 LATGLFGSFLGAISGGNLYRKSSFLEGALGERLFPEWLSIDERPLIPRAMASAAFDNDGL 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+ G + Y L TYS +KLG+ +T N+GG H+L + + ++ +L++M
Sbjct: 310 ATYAKPFVEKGELVSYVLGTYSGRKLGLPSTANAGGVHNLFV----SHGQEDQAALLRRM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ+ V+E+TI+G L++MF+QIVA+GS
Sbjct: 366 GRGLLVTELMGHGLNMVTGDYSRGAAGYWVENGEIQFPVQEVTIAGNLKDMFRQIVAVGS 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R + +GS+LIE M +AG
Sbjct: 426 DLELRGNIRTGSVLIERMTVAG 447
>gi|114046005|ref|YP_736555.1| microcin-processing peptidase 1 [Shewanella sp. MR-7]
gi|113887447|gb|ABI41498.1| microcin-processing peptidase 1. Unknown type peptidase. MEROPS
family U62 [Shewanella sp. MR-7]
Length = 447
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 166/434 (38%), Positives = 267/434 (61%), Gaps = 9/434 (2%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YA K+G + + + ++ G SV R +++ +E N D + + +Y +DG K G+SS
Sbjct: 21 LEYANKLGTNAAEVAISKQQGLSVSTRLKEVETVEFNKDGALGITVY-RDGCK---GSSS 76
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ + AA +IAR+T++D F+GL D+ + D KLY P +S D+ +
Sbjct: 77 TSDLSPEAIALAVKAADDIARYTSADPFSGLADKALMATEIRDLKLYYPEEISPDELAQL 136
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK- 204
A R E A + + I N++ S + NSHGF++GY S++ +S S I
Sbjct: 137 AIRAETAALDADPRINNSDGASANAHTSVKVYGNSHGFLNGYCSSRYSLSCSVIGEDSDG 196
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
MQRD Y+ ++ PE +G A++T+SRL A+KI+T + P+L +A L+
Sbjct: 197 SMQRDYDYTIARKFSEMLSPESVGLKTAQKTVSRLGARKIATSRLPILLSPEIATGLIGH 256
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
ISG SLYRKS+FL+D++ +IF I E PH+LG+ S+++D+EGV TQ R ++
Sbjct: 257 LVGAISGGSLYRKSSFLLDAIHTQIFPDWFNIEEQPHLLGALASANYDSEGVATQDRRII 316
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
G+++ Y L++YSA+KLG+ TG++GG ++ + + + E++K M TGL+VTE
Sbjct: 317 DRGMLESYLLTSYSARKLGLTNTGHAGGIYNWTL----AHTGQSFDELVKGMGTGLIVTE 372
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
+MG G+N +TGDYS+GA G+++ENG++Q+ VEEITI+G L++MF+ I A+ D R+S
Sbjct: 373 VMGQGVNMVTGDYSRGAAGFYVENGEVQFPVEEITIAGNLKDMFRGIQAVSKDFDLRSSI 432
Query: 445 TSGSILIENMIIAG 458
+G IL+ M +AG
Sbjct: 433 RTGGILLSEMKVAG 446
>gi|410087152|ref|ZP_11283857.1| TldE/PmbA protein [Morganella morganii SC01]
gi|409766381|gb|EKN50475.1| TldE/PmbA protein [Morganella morganii SC01]
Length = 446
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 164/451 (36%), Positives = 268/451 (59%), Gaps = 9/451 (1%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S+ + ++ +Q L+ A+K G + + + G SV R G+++ +E N+D +
Sbjct: 5 SQIMAQRTRLEQAVSQALSIAQK-GCDSAEVAVSRTTGMSVSTRMGEVENVEFNSDGALG 63
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
+ +Y K G++S++D ++++ T+ AA +IA++T+ D +G D + L D
Sbjct: 64 ITVYHNQRK----GSASSTDLSEEAIARTVQAAIDIAKYTSEDPCSGPADRDLLAFEAPD 119
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
+L+ P +S D A A E A + + I N E + + N+ G + Y
Sbjct: 120 LQLFYPSEVSADQAIDYAANAEKAALSADPRITNTEGGSFNSHYGIRVFGNTLGMLQSYC 179
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
S+H +S IA + +M+RD Y+ L + +G A+RT+SRL +K++T+K
Sbjct: 180 SSRHSMSACVIAEENGDMERDYAYTIARKLDDLKSAQWVGEECARRTLSRLAPRKLATQK 239
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
PV+F +A L ISG S+YRKSTFL+DSLGK+I + I E PH++G S
Sbjct: 240 APVIFAPEVATGLFGHLVGAISGTSVYRKSTFLLDSLGKQILPDWLTIRELPHVIGGLAS 299
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
+ FD+EGV+T+ RL+++NG++ + ++TY+A+KLG+K+TG++GG H+ I
Sbjct: 300 TPFDSEGVRTEDRLIIENGVLNNWLMTTYAARKLGLKSTGHAGGIHNWHIAGQGL----G 355
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
+ML++M TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L++M+
Sbjct: 356 FDDMLREMGTGLVVTELMGQGVSGITGDYSRGASGFWVENGEIQYPVSEITIAGNLKDMW 415
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
I+A G D+ TR++ GS+ + M IAG+
Sbjct: 416 ASIIATGDDIETRSNIQCGSVWLPEMSIAGQ 446
>gi|407692277|ref|YP_006817066.1| antibiotic maturation factor PmbA [Actinobacillus suis H91-0380]
gi|407388334|gb|AFU18827.1| antibiotic maturation factor PmbA [Actinobacillus suis H91-0380]
Length = 449
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 174/445 (39%), Positives = 276/445 (62%), Gaps = 8/445 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + LN+AK GA + + + G S R + + IE NND ++ + +Y+
Sbjct: 13 EQELRQAVEFALNFAKNSGA-EAEVGVTKVAGLSASTRLEQTENIEFNNDGSLGISVYV- 70
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
GK+ GN+STSD +S+ + +A IA++T+ D AGL D+ + + D +LY
Sbjct: 71 -GKRK--GNASTSDLQPQSIQRAVESALAIAKYTSEDECAGLADKEMMAFDAPDLELYHQ 127
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+S++ A +A E+ A N + IVN+E + + N+HG + Y S++ +
Sbjct: 128 ADISVEQAVELALEAEHHALNADEKIVNSEGATFNSHSGVRVYGNTHGMLQSYLSSRYSL 187
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S I+ +++RD Y+ + + KL PE +G AA + + RL +KI T + PV+F
Sbjct: 188 SCSVISAYEDQLERDYEYTISREFDKLQSPEWVGRQAAFKAVDRLNPQKIKTCEVPVIFY 247
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L+ A ISG +LYRKS+FL+D LG +I S I E PH+L SS+FD+E
Sbjct: 248 NDVATGLIGHLAGAISGGALYRKSSFLLDKLGTQILPSWFAISERPHLLRQLASSAFDSE 307
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV TQ R ++ +G++Q Y +++YSA+K+G+KTTG++GG H+ ++ N+T D+L LK
Sbjct: 308 GVITQDREIITDGVLQTYLMTSYSARKMGLKTTGHAGGIHNWLVKPNRTGGLDSL---LK 364
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGLLVTE +G IN +TG+YS+GA G+W+ENG+IQY V EITI+G+LQ M+K +VA+
Sbjct: 365 EMGTGLLVTEFLGSAINAVTGEYSRGAAGFWVENGEIQYPVAEITIAGQLQEMYKNLVAV 424
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
D+ R++ +GSIL++ M I+G+
Sbjct: 425 ADDIEHRSNIQTGSILLDKMKISGE 449
>gi|421492768|ref|ZP_15940127.1| hypothetical protein MU9_1297 [Morganella morganii subsp. morganii
KT]
gi|455740517|ref|YP_007506783.1| TldE/PmbA protein [Morganella morganii subsp. morganii KT]
gi|400192873|gb|EJO26010.1| hypothetical protein MU9_1297 [Morganella morganii subsp. morganii
KT]
gi|455422080|gb|AGG32410.1| TldE/PmbA protein [Morganella morganii subsp. morganii KT]
Length = 446
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 164/451 (36%), Positives = 268/451 (59%), Gaps = 9/451 (1%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
S+ + ++ +Q L+ A+K G + + + G SV R G+++ +E N+D +
Sbjct: 5 SQIMAQRTRLEQAVSQALSIAQK-GCDSAEVAVSRTTGMSVSTRMGEVENVEFNSDGALG 63
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
+ +Y K G++S++D ++++ T+ AA +IA++T+ D +G D + L D
Sbjct: 64 ITVYHNQRK----GSASSTDLSEEAIARTVQAAIDIAKYTSEDPCSGPADRDLLAFEAPD 119
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
+L+ P +S D A A E A + + I N E + + N+ G + Y
Sbjct: 120 LQLFYPSEVSADQAIDYAANAEKAALSADPRITNTEGGSFNSHYGIRVFGNTLGMLQSYC 179
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
S+H +S IA + +M+RD Y+ L + +G A+RT+SRL +K++T+K
Sbjct: 180 SSRHSMSACVIAEENGDMERDYAYTIARKLDDLKSAQWVGEECARRTLSRLAPRKLATQK 239
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
PV+F +A L ISG S+YRKSTFL+DSLGK+I + I E PH++G S
Sbjct: 240 APVIFAPEVATGLFGHLVGAISGTSVYRKSTFLLDSLGKQILPDWLTIRELPHVIGGLAS 299
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
+ FD+EGV+T+ RL+++NG++ + ++TY+A+KLG+K+TG++GG H+ I
Sbjct: 300 TPFDSEGVRTEDRLIIENGVLNNWLITTYAARKLGLKSTGHAGGIHNWHIAGQGL----G 355
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
+ML++M TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L++M+
Sbjct: 356 FDDMLREMGTGLVVTELMGQGVSGITGDYSRGASGFWVENGEIQYPVSEITIAGNLKDMW 415
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
I+A G D+ TR++ GS+ + M IAG+
Sbjct: 416 ASIIATGDDIETRSNIQCGSVWLPEMSIAGQ 446
>gi|113971785|ref|YP_735578.1| microcin-processing peptidase 1 [Shewanella sp. MR-4]
gi|113886469|gb|ABI40521.1| microcin-processing peptidase 1. Unknown type peptidase. MEROPS
family U62 [Shewanella sp. MR-4]
Length = 447
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 166/434 (38%), Positives = 267/434 (61%), Gaps = 9/434 (2%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YA K+G + + + ++ G SV R +++ +E N D + + +Y +DG K G+SS
Sbjct: 21 LEYANKLGTNAAEVAISKQQGLSVSTRLKEVETVEFNKDGALGITVY-RDGCK---GSSS 76
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ + AA +IAR+T++D F+GL D+ + D KLY P +S D+ +
Sbjct: 77 TSDLSPEAIALAVKAADDIARYTSADPFSGLADKALMATEIRDLKLYYPEDISPDELAQL 136
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK- 204
A R E A + + I N++ S + NSHGF++GY S++ +S S I
Sbjct: 137 AIRAETAALDADPRINNSDGASANAHTSVKVYGNSHGFLNGYCSSRYSLSCSVIGEDSDG 196
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
MQRD Y+ ++ PE +G A++T+SRL A+KI+T + P+L +A L+
Sbjct: 197 SMQRDYDYTIARKFSEMLSPESVGLKTAQKTVSRLGARKIATSRLPILLSPEIATGLIGH 256
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
ISG SLYRKS+FL+D++ +IF I E PH+LG+ S+++D+EGV TQ R ++
Sbjct: 257 LVGAISGGSLYRKSSFLLDAIHTQIFPDWFNIEEQPHLLGALASANYDSEGVATQDRRII 316
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
G+++ Y L++YSA+KLG+ TG++GG ++ + + + E++K M TGL+VTE
Sbjct: 317 DRGMLESYLLTSYSARKLGLTNTGHAGGIYNWTL----AHTGQSFDELVKGMGTGLIVTE 372
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
+MG G+N +TGDYS+GA G+++ENG++Q+ VEEITI+G L++MF+ I A+ D R+S
Sbjct: 373 VMGQGVNMVTGDYSRGAAGFYVENGEVQFPVEEITIAGNLKDMFRGIQAVSKDFDLRSSI 432
Query: 445 TSGSILIENMIIAG 458
+G IL+ M +AG
Sbjct: 433 RTGGILLSEMKVAG 446
>gi|118594488|ref|ZP_01551835.1| pmbA protein [Methylophilales bacterium HTCC2181]
gi|118440266|gb|EAV46893.1| pmbA protein [Methylophilales bacterium HTCC2181]
Length = 447
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 180/449 (40%), Positives = 275/449 (61%), Gaps = 18/449 (4%)
Query: 13 YSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIY 72
YS +A + + K GA+ S +E + +G S+ VR K++ IE +NDK + V +Y
Sbjct: 8 YSNQTLLDIADFTNDISTKNGATSSEVEISVASGKSISVRLSKLETIELHNDKALTVTVY 67
Query: 73 IQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLY 132
+ + + G +STSDF ++ D + AA IA++TA D GL + + D +L+
Sbjct: 68 MGNRR----GIASTSDFNLPAIKDCVLAACQIAKYTAEDEAFGLAEAHLYSKTTKDLELH 123
Query: 133 -----TPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
T FL ID A CE A +F+ I N+E + +S F ANS+GF+ G+
Sbjct: 124 HSFDATEQFL-IDTAT----SCEAYALDFSEKINNSEGAQLNCSESLFTYANSNGFVGGF 178
Query: 188 PFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTR 247
P S++ +S S + G MQRD+ YSS L + +G AA RT+ RL KKI T
Sbjct: 179 PSSRYSLSCSVLGGTGSSMQRDSSYSSTRAFDDLKSTQEVGQDAASRTLMRLNPKKIDTG 238
Query: 248 KCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFG 307
PV+FEAP+A +++ +SG +LYR+++FL++S+ ++ SS I I E+P +L
Sbjct: 239 TYPVIFEAPVATSIISSLISAVSGGNLYRENSFLMNSINTQVASSAITIEENPFLLRGNA 298
Query: 308 SSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD 367
S+ FD+EGV KR VV G++ GYFLS+YSA++L M+TTGN+GG+H+LII S
Sbjct: 299 STYFDDEGVMVNKRKVVDKGVLLGYFLSSYSARRLNMQTTGNAGGSHNLII----KDSGL 354
Query: 368 NLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNM 427
+ E++KKM GL+VTEL+G G+N +TGDYS+GA G W+ENG++Q++VEEITI+ +++M
Sbjct: 355 SFDELVKKMGRGLIVTELLGHGLNMVTGDYSRGAAGLWVENGEVQFAVEEITIASNIKDM 414
Query: 428 FKQIVAIGSDVLTRNSNTSGSILIENMII 456
I A+ +D T +S +GSIL++ M++
Sbjct: 415 LMNIEAVATDTYTNSSKYTGSILVKEMMV 443
>gi|398801148|ref|ZP_10560396.1| putative Zn-dependent protease-like protein [Pantoea sp. GM01]
gi|398092790|gb|EJL83196.1| putative Zn-dependent protease-like protein [Pantoea sp. GM01]
Length = 446
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 165/442 (37%), Positives = 260/442 (58%), Gaps = 9/442 (2%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+Q L AK + + + G V R G+++ +E N+D + + +Y Q+ K
Sbjct: 14 LEQAVAQALELAKA-STDGAEVAVTKTTGIGVSTRYGEVENVEFNSDGALGITVYHQNRK 72
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++S++D ++ T+ AA +IAR+T+ D F D + L + D LY PW +
Sbjct: 73 ----GSASSTDLSPDAIKRTVQAAIDIARYTSVDPFGAPADPDLLAFDAPDLDLYHPWEI 128
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A +A + E + + I N E + + NSHG + Y S+H +S
Sbjct: 129 DADRAIELAAQAEQASLQADKRITNTEGGSFNSHVGIKVFGNSHGMLQSYCSSRHSLSSC 188
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA + M+RD Y+ L + +G A+R ++RL +K+ST K PV+F +
Sbjct: 189 VIAEQDGNMERDYAYTIGRSFDDLKSADWVGAECARRVLARLAPRKLSTMKAPVIFAPEV 248
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L +ISG+S+YRKSTFL+DSLGK+I + I E PH+L S+ FD+EGV+
Sbjct: 249 ATGLFGHLVGMISGSSVYRKSTFLLDSLGKQILPEWLTIEEHPHLLKGLASTPFDSEGVR 308
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
TQ R ++K+G++Q + L++YSA+KLG+++TG++GG H+ I + +MLK+M
Sbjct: 309 TQSRDIIKDGVLQNWLLTSYSARKLGLQSTGHAGGIHNWRIAGQ----GHSFDDMLKQMG 364
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGL+VTE+MG IN +TGDYS+GA G+W+ENG+IQY V EITI+G L++M+ +V +G+D
Sbjct: 365 TGLVVTEMMGSSINGMTGDYSRGASGFWVENGEIQYPVSEITIAGNLRDMWLNMVTVGND 424
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
+ TR++ GS+L+ M IAG+
Sbjct: 425 IETRSNIQCGSVLLPEMKIAGQ 446
>gi|163802920|ref|ZP_02196808.1| PmbA protein [Vibrio sp. AND4]
gi|159173327|gb|EDP58153.1| PmbA protein [Vibrio sp. AND4]
Length = 447
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 170/446 (38%), Positives = 263/446 (58%), Gaps = 10/446 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
++E +Q L A + + + + G SV R G ++ +E N+D + + +Y
Sbjct: 11 RTELEQAVSRALEIAAA-KSDAAEVAITKSTGLSVSTRMGDVENVEFNSDGALGITVY-- 67
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
+ G++STSD + ++ T+ AA +IA++T+ D FAG + + D L+ P
Sbjct: 68 --RGQRKGSASTSDLSEAAIEQTVLAALDIAQYTSEDPFAGPAAKEYMVKEIPDLDLFHP 125
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
D A +A E EA +++ I ++ + + NSHG ++ Y S+H
Sbjct: 126 DAPDPDYAAQVAIAAEKEALSYSDAIKQSDGASYDSHYGVKVYGNSHGLLASYASSRHST 185
Query: 195 SISPIAI-KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLF 253
S I + + EM+RD Y+ +L PE +G AA++TISRL A+K+ T K PV+F
Sbjct: 186 SCCVIGVGQNGEMERDYCYTVARHRDELWAPETVGRNAAEKTISRLDAQKLKTGKYPVMF 245
Query: 254 EAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDN 313
A +A L+ ISG +LYR S+FLVD LGK + I E PH+L SS FD+
Sbjct: 246 AADVATGLIGHLVMAISGGNLYRNSSFLVDHLGKPVLPEWFNISERPHVLRGLASSPFDS 305
Query: 314 EGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEML 373
EGV TQ R ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S + N ++ML
Sbjct: 306 EGVYTQDREIITDGVLATYLLTSYAARKMKMDPTGHAGGIHNWYVKS----TGQNFEQML 361
Query: 374 KKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVA 433
+++ TGLLVTE MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MF QIVA
Sbjct: 362 RELGTGLLVTETMGQGVNIVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFNQIVA 421
Query: 434 IGSDVLTRNSNTSGSILIENMIIAGK 459
+GSDV TR+ +GSIL++ M +AG+
Sbjct: 422 VGSDVETRSQIQTGSILLDTMKVAGE 447
>gi|217971744|ref|YP_002356495.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS223]
gi|217496879|gb|ACK45072.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS223]
Length = 447
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 168/434 (38%), Positives = 266/434 (61%), Gaps = 9/434 (2%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YA K+G + + + ++ G SV R +++ +E N D + + +Y +DG K G+SS
Sbjct: 21 LEYANKLGTNAAEVAISKQQGLSVSTRLKEVETVEFNKDGALGITVY-RDGCK---GSSS 76
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ + AA +IAR+T+ D F+GL D+ + D +LY P +S D+ +
Sbjct: 77 TSDLSPEAIALAVKAADDIARYTSPDPFSGLADKALMANQIRDLQLYYPEDISPDELAQL 136
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK- 204
A R E A + + I N++ + + NSHGF++GY S++ +S S I +
Sbjct: 137 AIRAETAALDADPRINNSDGASANAHTAVKVYGNSHGFLNGYCSSRYSLSCSVIGEDSEG 196
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
MQRD Y+ ++ PE +G A++T+SRL A+KI+T + P+L +A L+
Sbjct: 197 NMQRDYDYTIARKFSEMLAPETVGLKTAEKTVSRLGARKIATTRLPILLAPDIATGLIGH 256
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
F ISG SLYRKS+FL+DS+ +IF I E PH+LG+ S+++D+EGV TQ R ++
Sbjct: 257 FIGAISGGSLYRKSSFLLDSINTQIFPDWFNIEEQPHLLGALASANYDSEGVSTQDRRII 316
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
G+++ Y L++YSA+KLG+ TG++GG ++ + + E++K M TGL+VTE
Sbjct: 317 DRGMLETYLLTSYSARKLGLTNTGHAGGIYNWTL----GHTGQTFDELVKDMGTGLIVTE 372
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
+MG G+N +TGDYS+GA G+++ENG+IQY VEEITI+G L+ MF+ + A+ D R+S
Sbjct: 373 VMGQGVNMVTGDYSRGAAGFYVENGEIQYPVEEITIAGNLKEMFRGVQAVSKDFDLRSSI 432
Query: 445 TSGSILIENMIIAG 458
+G IL+ M IAG
Sbjct: 433 RTGGILLSEMKIAG 446
>gi|381402926|ref|ZP_09927610.1| peptidase PmbA [Pantoea sp. Sc1]
gi|380736125|gb|EIB97188.1| peptidase PmbA [Pantoea sp. Sc1]
Length = 446
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 172/441 (39%), Positives = 266/441 (60%), Gaps = 10/441 (2%)
Query: 19 QQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKK 78
Q +AQ L AK + + ++ G V R G+++ +E N+D + + +Y Q+ K
Sbjct: 16 QAIAQ-ALELAKA-STDSAEVAVSKTTGIGVSTRYGEVENVEFNSDGALGITVYHQNRK- 72
Query: 79 MFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLS 138
G++S++D ++ T+ AA +IAR+T+ D FAG D L + D LY PW +
Sbjct: 73 ---GSASSTDLSPDAIKRTVQAAIDIARYTSPDPFAGPADAALLAYDAPDLDLYHPWEID 129
Query: 139 IDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISP 198
D A +A + E + + I N E + + NSHG + Y S+H +S
Sbjct: 130 ADRAIELAAQAEEASLRADKRITNTEGGSFNSHVGIKVFGNSHGMLQSYCSSRHSLSSCV 189
Query: 199 IAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLA 258
IA + M+RD Y+ + L PE +G A+RT+SRL +K+ T K PV+F + +A
Sbjct: 190 IAEQDGNMERDYAYTIGRAFEDLKSPEWVGAECARRTLSRLAPRKLPTMKAPVIFASEVA 249
Query: 259 FELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKT 318
L ISG+S+YRKSTFL+D++G++I + I E PH+L S+ FD+EGV+T
Sbjct: 250 TGLFGHLVGAISGSSVYRKSTFLLDAMGQQILPEWLTISEQPHLLKGLASTPFDSEGVRT 309
Query: 319 QKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNT 378
Q R +++ G++Q + L++YSA+KLG+ +TG++GG H+ I+ + S D+L LK+M T
Sbjct: 310 QARDIIQAGVLQTWLLTSYSARKLGLTSTGHAGGIHNW-RIAGQGHSFDDL---LKQMGT 365
Query: 379 GLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDV 438
GL+VTELMG G++ ITGDYS+GA G+W+ENG IQY V EITI+G L+ M++ +V IG D+
Sbjct: 366 GLVVTELMGQGVSAITGDYSRGAAGFWVENGVIQYPVSEITIAGNLKEMWRNMVTIGDDI 425
Query: 439 LTRNSNTSGSILIENMIIAGK 459
TR++ GS+L+ M IAG+
Sbjct: 426 ETRSNIQCGSVLLPEMKIAGQ 446
>gi|190150041|ref|YP_001968566.1| antibiotic maturation factor [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307263374|ref|ZP_07544990.1| Protein pmbA [Actinobacillus pleuropneumoniae serovar 13 str. N273]
gi|189915172|gb|ACE61424.1| antibiotic maturation factor [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306871252|gb|EFN02980.1| Protein pmbA [Actinobacillus pleuropneumoniae serovar 13 str. N273]
Length = 449
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 175/445 (39%), Positives = 276/445 (62%), Gaps = 8/445 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + LN+AKK GA + + + G SV R + + IE NND ++ + +Y+
Sbjct: 13 EKELRQAVEFALNFAKKSGA-EAEVGVTKVAGLSVSTRLEQTENIEFNNDGSLGISVYV- 70
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
GK+ GN+STSD +S+ + +A IA++T+ D AGL D+ + D +LY
Sbjct: 71 -GKRK--GNASTSDLQPQSIQRAVESALAIAKYTSEDECAGLADKEMMAFEAPDLELYHQ 127
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+SI+ A +A E+ A N + IVN+E + + N+HG + Y S++ +
Sbjct: 128 ADISIEQAVELALEAEHHALNADEKIVNSEGATFNSHSGVRVYGNTHGMLQSYLSSRYSL 187
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S I+ +++RD Y+ + + KL P+ IG AA + + RL +KI T + PV+F
Sbjct: 188 SCSVISAYEDQLERDYEYTISREFDKLQSPKWIGRQAAFKAVDRLNPQKIKTCEVPVIFY 247
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L+ A ISG +LYRKS+FL+D LG +I S I E PH+L SS+FD+E
Sbjct: 248 NDVATGLIGHLAGAISGGALYRKSSFLLDKLGTQILPSWFAISERPHLLRQLASSAFDSE 307
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV TQ R ++ +G++Q Y +++YSA+K+G+KTTG++GG H+ ++ N+T D L LK
Sbjct: 308 GVITQDREIITDGVLQTYLMTSYSARKMGLKTTGHAGGIHNWLVKPNRTGGLDTL---LK 364
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M +GLLVTE +G IN +TG+YS+GA G+W+ENG+IQY V EITI+G+LQ M+K ++A+
Sbjct: 365 EMGSGLLVTEFLGSAINAVTGEYSRGAAGFWVENGEIQYPVAEITIAGQLQEMYKNLIAV 424
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
D+ R++ +GSIL++ M I+G+
Sbjct: 425 ADDIEHRSNIQTGSILLDKMKISGE 449
>gi|146305900|ref|YP_001186365.1| C69 family peptidase [Pseudomonas mendocina ymp]
gi|145574101|gb|ABP83633.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Pseudomonas mendocina ymp]
Length = 448
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 266/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + +L A + GAS + + G G S VR+G+++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEAILAEAARQGASACEVAVSAGQGLSTTVRQGEVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS + ++ +T+ AA IAR + D AGL D + + + LY PW +
Sbjct: 75 ----GSASTSATGEAAIRETVAAALAIARHASEDECAGLADAALMARDLPELDLYHPWSI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF ++ I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 131 TPEQAVEQALACEAAAFAADARIKNADGTSLNTHQGCRVYGNSNGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N + L P IG AA+R +SRL A+ + T + PVLF A L
Sbjct: 191 MIAEGEGQMQRDYWYDVNRQGELLADPAGIGQRAAERAVSRLGARPVPTCEVPVLFAAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L + ISG +LYR S+FL +LG+ +F + + E PH+ + GS++FD +G+
Sbjct: 251 AGGLFSHLLAAISGGNLYRHSSFLEGALGQCLFPEWLSLDERPHLPRALGSAAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TYS +KLG+ +T NSGG H+L + T +N + +L++M
Sbjct: 311 TYAKPFVEKGELVSYVLGTYSGRKLGLPSTANSGGVHNLFV----THGDENQQALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G L++MF+QIVA+G D
Sbjct: 367 RGLLVTELMGQGLNLVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNLRDMFRQIVAVGRD 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R + +GS+LIE M +AG
Sbjct: 427 LERRGNICTGSVLIEKMTVAG 447
>gi|409394199|ref|ZP_11245428.1| PmbA protein [Pseudomonas sp. Chol1]
gi|409121256|gb|EKM97394.1| PmbA protein [Pseudomonas sp. Chol1]
Length = 448
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 171/442 (38%), Positives = 267/442 (60%), Gaps = 8/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++ + ++ A++ GAS S + + G S VR+G+++ +E N D+ + +Y+ K
Sbjct: 15 LREKVERIIEEARRQGASASEVSVSMEQGLSTTVRQGEVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST+ ++ +T+ AA IAR + D FAGL D + D L+ PW +
Sbjct: 75 ----GSASTTGSGDAAIRETVAAALAIARHASEDEFAGLADAALMARELPDLDLFHPWSV 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
S + A A RCE AF + I N + T + T Q NS+GF+ Y ++H +S
Sbjct: 131 SPEQAIETALRCEEAAFAVDPRIRNADGTSLNTHQGCRAYGNSNGFIGSYCSTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD +Y + L P IG AA+R + RL A+ + T + PVLF A L
Sbjct: 191 MIAEHAGQMQRDYYYDVSRRADTLADPLSIGRRAAERAVRRLGARPVPTCEVPVLFAADL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG++LYRK+++L ++LG+ +F + + E PH+ + GS+S+D +G+
Sbjct: 251 ATGLFGHFLAAISGSNLYRKASYLENALGQTLFPEWLSLDERPHLAQALGSASYDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y L TYS +KLG+ +T N+GG H+L + + ++ +L++M
Sbjct: 311 TYAKPFVENGQLISYVLGTYSGRKLGLPSTANAGGVHNLFV----SHGEEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ+ V+E+TI+G L++MF+QIVA+G D
Sbjct: 367 RGLLVTELMGQGLNLVTGDYSRGAGGYWVENGEIQFPVQEVTIAGNLRDMFRQIVAVGCD 426
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
TR++ +GS+LIE M +AGK
Sbjct: 427 TETRSNIRTGSVLIERMTVAGK 448
>gi|291619054|ref|YP_003521796.1| PmbA [Pantoea ananatis LMG 20103]
gi|378765520|ref|YP_005193980.1| peptidase PmbA [Pantoea ananatis LMG 5342]
gi|386077764|ref|YP_005991289.1| peptide maturation protein PmbA [Pantoea ananatis PA13]
gi|291154084|gb|ADD78668.1| PmbA [Pantoea ananatis LMG 20103]
gi|354986945|gb|AER31069.1| peptide maturation protein PmbA [Pantoea ananatis PA13]
gi|365184993|emb|CCF07943.1| peptidase PmbA [Pantoea ananatis LMG 5342]
Length = 446
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 169/445 (37%), Positives = 261/445 (58%), Gaps = 9/445 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
++ +Q L AK + + ++ G V R G+++ +E N+D + + +Y Q
Sbjct: 11 RTALEQAIAQALELAKA-STDGAEVAVSKTTGIGVSTRYGEVENVEFNSDGALGITVYHQ 69
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
+ K G++S++D ++ T+ AA +IAR+T+ D FAG D L D LY P
Sbjct: 70 NRK----GSASSTDLSPDAIKRTVQAAIDIARYTSPDPFAGPADAELLAYEAPDLDLYHP 125
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
W + D A +A + E A + I N E + + NSHG + Y S+H +
Sbjct: 126 WEIDADHAIKLAAQAEQAALQADKRITNTEGGSFNSHIGIKVFGNSHGMLQSYCSSRHSL 185
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S IA + M+RD Y+ L P+ +G A+RT+SRL +K+ T K PV+F
Sbjct: 186 SSCVIAEQDGNMERDYAYTIGRAIDDLKSPDWVGAECARRTLSRLAPRKLDTMKAPVIFA 245
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L ISG+S+YRKSTFL+D++GK+I + I E PH+L S+ FD+E
Sbjct: 246 PEVATGLFGHLVGAISGSSVYRKSTFLLDAMGKQILPEWLTIQEQPHLLKGLASTPFDSE 305
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+TQ R ++K+G++Q + +++YSA+KLG+ +TG++GG H+ I + MLK
Sbjct: 306 GVRTQARDIIKDGVLQTWLMTSYSARKLGLTSTGHAGGIHNWRIAGQ----GHSFDAMLK 361
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L +M++ IV +
Sbjct: 362 QMGTGLVVTELMGQGVSAITGDYSRGAAGFWVENGEIQYPVSEITIAGNLGDMWRNIVTV 421
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
G D+ TR++ GS+L+ M IAG+
Sbjct: 422 GDDIETRSNIQCGSVLLPEMYIAGQ 446
>gi|407698472|ref|YP_006823259.1| pmbA protein [Alteromonas macleodii str. 'Black Sea 11']
gi|407247619|gb|AFT76804.1| pmbA protein [Alteromonas macleodii str. 'Black Sea 11']
Length = 443
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/443 (39%), Positives = 257/443 (58%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
++ Q + D+L A GA+ + ++ G +V R +++ +E ND + + +Y+
Sbjct: 8 ADIQNVVDDVLKLALSKGATQAEASMSKVQGIAVSSRMQEVENVEFTNDGGLGISVYV-- 65
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
GK+ G++ST+D K +L + A +IAR+T+ D GL D + + D LY P
Sbjct: 66 GKRK--GSASTADLSKAALTLAVEKAVDIARYTSEDPCTGLADADLIATEFPDLDLYHPE 123
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L + A IA E A N++S I N++ + N+HG +GYP S++ +S
Sbjct: 124 ELDTEKAIKIAIEAETAAMNYDSRITNSDGASYNANLGMRVYGNTHGINAGYPSSRYSLS 183
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD Y+ + L +G AAK T+ RL A+KI+T PVL
Sbjct: 184 CMVIGAQDNDMQRDYAYTVSRKASLLQSASAVGIEAAKATVDRLGARKINTANVPVLLHR 243
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L + ISG SLYR+S+FL+DSLGK++F + I E P I G SSSFDNEG
Sbjct: 244 DIASSLFGHYVGAISGGSLYRRSSFLLDSLGKQVFPEWLNIEERPFIKGGLASSSFDNEG 303
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V +V G + Y +TYS++KL ++ G++GG H+ ++ T SD ++LK+
Sbjct: 304 VACSDMTIVDGGKLATYLYTTYSSRKLNTRSNGHAGGIHNWLV--GDTGHSD--ADLLKE 359
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGL VTELMG G+N +TGDYS+GA GYW+ENG IQY V E+TI+G L++MFK IVAIG
Sbjct: 360 MGTGLFVTELMGQGVNGVTGDYSRGAAGYWVENGIIQYPVHEVTIAGNLKDMFKGIVAIG 419
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
++ R S +GS+LI+ M IAG
Sbjct: 420 TEKDVRGSVQTGSVLIDQMKIAG 442
>gi|238782985|ref|ZP_04627013.1| Protein pmbA [Yersinia bercovieri ATCC 43970]
gi|238716188|gb|EEQ08172.1| Protein pmbA [Yersinia bercovieri ATCC 43970]
Length = 446
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 171/457 (37%), Positives = 273/457 (59%), Gaps = 16/457 (3%)
Query: 3 QLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQN 62
Q+ + R ++ ++ +LA + G+ + + ++ G SV R G+++ +E N
Sbjct: 6 QVAEQRKTLEHAVAQALELA--------RAGSDAAEVAVSKTTGISVSTRFGEVENVEFN 57
Query: 63 NDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTL 122
+D + + +Y Q K G++ST+D ++ T+ AA +IAR+T+ D +AG +++ L
Sbjct: 58 SDGALGITVYHQQRK----GSASTTDLSPDAVARTVQAALDIARYTSPDPYAGPAEKSLL 113
Query: 123 EMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHG 182
D L+ P L + L+A R E A ++ I N E + + NSHG
Sbjct: 114 AFEAPDLDLFHPGDLDAEQGILLAARAEQAALQADTRITNTEGGSFNSHYGIKVFGNSHG 173
Query: 183 FMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAK 242
+ Y S+H +S S IA +M+RD Y+ + L PE +G A+RT+SRL +
Sbjct: 174 MLQSYCSSRHSLSSSVIAEHNGDMERDYAYTIGRRMEDLANPEWVGEECARRTLSRLSPR 233
Query: 243 KISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHI 302
K+ T + PVLF A +A L ISG ++YRKSTFL+D LGK+I + I E PH+
Sbjct: 234 KLPTMESPVLFAAEVATGLFGHLVSAISGGNIYRKSTFLLDHLGKQILPEWLTIEEHPHL 293
Query: 303 LGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNK 362
L S+ FD+EGV+T +R +VK+G++Q Y L++YSA+KLG+++TG++GG H+ I
Sbjct: 294 LRGLASTPFDSEGVRTLQREIVKDGVLQTYLLTSYSARKLGLQSTGHAGGIHNWRIAGQ- 352
Query: 363 TKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISG 422
+ MLK+++ GL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G
Sbjct: 353 ---GQDFAGMLKQLDKGLVVTELMGQGVSTVTGDYSRGAAGFWVENGEIQYPVSEITIAG 409
Query: 423 KLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
L++M + IV++GSD+ R++ GS+L+ M IAG+
Sbjct: 410 NLKDMLRNIVSVGSDIELRSNIQCGSVLLPAMKIAGE 446
>gi|162420492|ref|YP_001605713.1| peptidase PmbA [Yersinia pestis Angola]
gi|162353307|gb|ABX87255.1| pmbA protein [Yersinia pestis Angola]
Length = 446
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 171/455 (37%), Positives = 272/455 (59%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K ++ + +Q L A+ +G+ + + ++ G SV R G+++ +E N+D
Sbjct: 1 MKVVTQVAEQRKTLEQAVAQALELAR-VGSDAAEVAVSKTTGISVSTRFGEVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q K G++ST+D ++ T+ AA +IAR+T+ D +AG D++ L
Sbjct: 60 GALGITVYHQQRK----GSASTTDLNPDAVARTVQAALDIARYTSPDPYAGPADKSLLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
+ D L+ P L + L+A R E A + I N E + + NSHG +
Sbjct: 116 DAPDLDLFHPGDLDAEQGILLAARAEQAALQADKRITNTEGGSFNSHYGIKVFGNSHGML 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S+H +S S IA +M+RD Y+ + L PE +G A+RT+SRL +K+
Sbjct: 176 QSYCSSRHSLSSSVIAEHNGDMERDYAYTIGRRMEDLATPEWVGEECARRTLSRLSPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
T + PVLF A +A L ISG ++YRKSTFL+D LG++I + I E PH+L
Sbjct: 236 PTMQSPVLFAAEVATGLFGHLVSAISGGNIYRKSTFLLDHLGQQILPEWLTIEEHPHLLR 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+T +R +VK+G++Q Y L++Y A+KLG+++TG++GG H+ I
Sbjct: 296 GLASTPFDSEGVRTLQREIVKDGVLQTYLLTSYFARKLGLQSTGHAGGIHNWRIAGQ--- 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ MLK+++ GL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L
Sbjct: 353 -GQDFAGMLKQLDKGLVVTELMGQGVSTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M + IV++GSD+ TR++ GS+L+ M IAG+
Sbjct: 412 KDMLRNIVSVGSDIETRSNIQCGSVLLPVMKIAGE 446
>gi|317049719|ref|YP_004117367.1| peptidase U62 modulator of DNA gyrase [Pantoea sp. At-9b]
gi|316951336|gb|ADU70811.1| peptidase U62 modulator of DNA gyrase [Pantoea sp. At-9b]
Length = 446
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 169/442 (38%), Positives = 262/442 (59%), Gaps = 9/442 (2%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+Q L AK + + + G V R G+++ +E N+D + + +Y Q+ K
Sbjct: 14 LEQAVAQALELAKA-STDGAEVAVTKTTGIGVSTRYGEVENVEFNSDGALGITVYHQNRK 72
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++S++D ++ T+ AA +IAR+T++D AG D + L D LY PW +
Sbjct: 73 ----GSASSTDLSPDAIKRTVQAAIDIARYTSTDPNAGPADRDLLAFEAPDLDLYHPWEI 128
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A +A + E A +S I N E + + NSHG + Y S+H +S
Sbjct: 129 DADRAIELAAQAEQAALQADSRITNTEGGSFNSHVGIKVFGNSHGMLQSYCSSRHSLSSC 188
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA + EM+RD Y+ D L + +G A+R +SRL +K+ST K PV+F +
Sbjct: 189 VIAEQNGEMERDYAYTIGRDINDLQSADWVGAECARRVLSRLAPRKLSTMKAPVIFAPEV 248
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L ISG S+YRKSTFL+D+LG +I + I E PH+L S+ FD+EGV+
Sbjct: 249 ATGLFGHLVGAISGGSVYRKSTFLLDALGTQILPEWLTIEEKPHLLKGLASTPFDSEGVR 308
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
TQ R ++K G++Q + L++YSA+KLG+++TG++GG H+ I + +++LK+M
Sbjct: 309 TQARDIIKQGVLQNWLLTSYSARKLGLQSTGHAGGIHNWRIAGQ----GHSFEDLLKQMG 364
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GL+VTELMG G++ ITGDYS+GA GYW+ENG+IQY V EITI+G L++M++ +V +G+D
Sbjct: 365 RGLVVTELMGQGVSAITGDYSRGAAGYWVENGEIQYPVSEITIAGNLKDMWRNMVTVGND 424
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
+ TR++ GS+L+ M IAG+
Sbjct: 425 IETRSNIQCGSVLLPEMKIAGQ 446
>gi|260599414|ref|YP_003211985.1| peptidase PmbA [Cronobacter turicensis z3032]
gi|429101836|ref|ZP_19163810.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Cronobacter turicensis 564]
gi|260218591|emb|CBA33855.1| Protein pmbA [Cronobacter turicensis z3032]
gi|426288485|emb|CCJ89923.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Cronobacter turicensis 564]
Length = 446
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 163/423 (38%), Positives = 258/423 (60%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D ++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPDAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ +++ L + D L+ P + + A A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVAEKDLLAFDAPDLDLFHPAEIEPEQAIDYAARAEQAALKA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + Y ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQSYSSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L+ PE +G A+RT+SRL +K+ T K PV+F +A L ISG ++YR
Sbjct: 208 ALGDLESPEWVGEECARRTLSRLSPRKLPTMKAPVIFGREVATGLFGHLVGAISGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV T +R ++K+G++Q + L+
Sbjct: 268 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASTPFDSEGVATSRRDIIKDGVLQQWLLTN 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIKGRGL----SFEQLLKEMGTGLVVTELMGQGVSGITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ +V IG D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNMVTIGDDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGE 446
>gi|260912985|ref|ZP_05919470.1| peptide maturation protein PmbA [Pasteurella dagmatis ATCC 43325]
gi|260632975|gb|EEX51141.1| peptide maturation protein PmbA [Pasteurella dagmatis ATCC 43325]
Length = 451
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 169/444 (38%), Positives = 278/444 (62%), Gaps = 12/444 (2%)
Query: 19 QQLAQDMLNYA----KKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+Q +D ++YA +K GA+ + + + +G SV R +I+ +E NND + + +Y+
Sbjct: 15 EQALRDAVSYAIETAQKAGAT-AEVAVTKVSGLSVSTRLQEIENVEFNNDGALGISVYLG 73
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K GN+STSD +++ + + AA IA++T+ D +GL ++ + + D LY
Sbjct: 74 QQK----GNASTSDLSPEAIKNAVEAALAIAKYTSPDECSGLAEKELMAFDAPDLDLYHA 129
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+ +D A +A E A +++ IVN+E + + NSHG + Y S++ +
Sbjct: 130 TEIDVDKAVELALSAETAALSYDKRIVNSEGAAFNSHTGVRVYGNSHGMLQSYLSSRYSL 189
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S IA +++RD Y+ + + L+ +G AK+T+SRL+ +K++T++ PV+F
Sbjct: 190 SCSVIAGVEDQLERDYEYTISRNMGMLESAMWVGENCAKKTLSRLQPRKLATQQVPVVFL 249
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L++ ISG SLYRK++FL+D LGK++ +I E PH++G SS FD+E
Sbjct: 250 NDVATGLVSHLTAAISGGSLYRKASFLLDHLGKQVLPDWFEISEHPHLIGQLASSPFDSE 309
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+TQ R ++ GI+Q Y L++YS KKLGM++TG++GG H+ ++ K + L +LK
Sbjct: 310 GVRTQDRSIISQGILQTYLLTSYSGKKLGMQSTGHAGGIHNWLV---KPNTQGGLTTLLK 366
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGLLVT+LMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L+ M + IVA+
Sbjct: 367 QMGTGLLVTDLMGHGVNLVTGDYSRGAAGFWVENGEIQYPVAEITIAGDLKEMLRNIVAV 426
Query: 435 GSDVLTRNSNTSGSILIENMIIAG 458
G D+ R++ +GSIL+E++ ++G
Sbjct: 427 GDDIEYRSNIQTGSILLESLKVSG 450
>gi|145635604|ref|ZP_01791302.1| PmbA [Haemophilus influenzae PittAA]
gi|145267166|gb|EDK07172.1| PmbA [Haemophilus influenzae PittAA]
Length = 451
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 173/444 (38%), Positives = 273/444 (61%), Gaps = 8/444 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + A K GAS + + + +G SV R +I+ +E ND + + +Y++
Sbjct: 15 EQELRQAVSFAVELATKAGAS-AEVAVTKVSGLSVSARLQEIENVEFTNDGALGISVYMR 73
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K GN+STSD + ++ + + AA IA++T+ D+ GL D++ + N D +LY
Sbjct: 74 QQK----GNASTSDLSESAIKNAVEAALAIAKYTSPDDCTGLADKDLMAFNVPDLELYHA 129
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+ +D A +A + E A + I+N+ T+ + NSHG + Y S++ +
Sbjct: 130 ADVDVDKATELALQAEKAALEADERIINSNGASFTSHTGVKVYGNSHGMLQSYLSSRYSL 189
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S I ++ D Y+ + + KL P +G AK+ +SRL +K+STR+ PV+F
Sbjct: 190 SCSVIGGVEDALENDYEYTISREFDKLQSPIWVGENCAKKVVSRLNPQKLSTREVPVIFL 249
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L++ FA ISG SLYRKS+FL+D LGK++ I E PH+L S+ FD+E
Sbjct: 250 NDVATGLISHFAAAISGGSLYRKSSFLLDYLGKQVLPDWFNISERPHLLRRLASTPFDSE 309
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+TQ R +V+NGI+Q Y +++YS KKLGM +TG++GG H+ ++ N T L +L+
Sbjct: 310 GVRTQDREIVENGILQTYLVTSYSGKKLGMPSTGHAGGIHNWLVKPNLTG---GLTALLR 366
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+LQ+M K +VA+
Sbjct: 367 EMGTGLLVTDVMGQGVNIVTGDYSRGASGFWVENGEIQYPVAEITIAGQLQDMLKNMVAV 426
Query: 435 GSDVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GSIL++ M I+G
Sbjct: 427 ADDIEHRSNIQTGSILLDKMKISG 450
>gi|167466802|ref|ZP_02331506.1| peptidase PmbA [Yersinia pestis FV-1]
Length = 446
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 171/455 (37%), Positives = 272/455 (59%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K ++ + +Q L A+ +G+ + + ++ G SV R G+++ +E N+D
Sbjct: 1 MKVVTQVAEQRKTLEQAVAQALELAR-VGSDAAEVAVSKTTGISVSTRFGEVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q K G++ST+D ++ T+ AA +IAR+T+ D +AG D++ L
Sbjct: 60 GALGITVYHQQRK----GSASTTDLNPDAVARTVQAALDIARYTSPDPYAGPADKSLLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
+ D L+ P L + L+A R A + I N E + + NSHG +
Sbjct: 116 DAPDLDLFHPGDLDAEQGILLAARAVQAALQADKRITNTEGGSFNSHYGIKVFGNSHGML 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S+H +S S IA +M+RD Y+ + L PE +G A+RT+SRL +K+
Sbjct: 176 QSYCSSRHSLSSSVIAEHNGDMERDYAYTIGRRMEDLATPEWVGEECARRTLSRLSPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
T + PVLF A +A L ISG ++YRKSTFL+D LG++I + I E PH+L
Sbjct: 236 PTMQSPVLFAAEVATGLFGHLVSAISGGNIYRKSTFLLDHLGQQILPEWLTIEEHPHLLR 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+T +R +VK+G++Q Y L++YSA+KLG+++TG++GG H+ I
Sbjct: 296 GLASTPFDSEGVRTLQREIVKDGVLQTYLLTSYSARKLGLQSTGHAGGIHNWRIAGQ--- 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ MLK+++ GL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L
Sbjct: 353 -GQDFAGMLKQLDKGLVVTELMGQGVSTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M + IV++GSD+ TR++ GS+L+ M IAG+
Sbjct: 412 KDMLRNIVSVGSDIETRSNIQCGSVLLPVMKIAGE 446
>gi|336312949|ref|ZP_08567894.1| tldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Shewanella sp. HN-41]
gi|335863561|gb|EGM68705.1| tldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Shewanella sp. HN-41]
Length = 447
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 167/434 (38%), Positives = 266/434 (61%), Gaps = 9/434 (2%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YA K+G + + + ++ G SV R +++ +E N D + + +Y +DG K G+SS
Sbjct: 21 LEYANKLGTNAAEVAISKQQGLSVSTRLKEVETVEFNKDGALGITVY-RDGCK---GSSS 76
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ + AA +IAR+T+ D F+GL D+ + D KLY P +S ++ +
Sbjct: 77 TSDLSPEAIALAVKAADDIARYTSPDPFSGLADKALMATQIRDLKLYYPEDISPEELAQL 136
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK- 204
A R E A + + I N++ S + NSHGF++GY S++ +S S I
Sbjct: 137 AIRAETAALDADPRINNSDGASANAHTSVKVYGNSHGFLNGYCSSRYSLSCSVIGEDSDG 196
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
MQRD Y+ ++ PE +G A++T+SRL A+KI+T + P+L +A L+
Sbjct: 197 NMQRDYDYTIARKFSEMLAPEAVGLKTAQKTVSRLGARKIATTRLPILLAPEIATGLIGH 256
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
ISG SLYRKS+FL+D++ +IF I E PH+LG+ S+++D+EGV TQ R ++
Sbjct: 257 LIGAISGGSLYRKSSFLLDAIHTQIFPDWFNIEEQPHLLGALASANYDSEGVATQDRRII 316
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
G+++ Y L++YSA+KLG+ TG++GG ++ + + E++K M TGL+VTE
Sbjct: 317 DRGMLETYLLTSYSARKLGLPNTGHAGGIYNWTL----GHTGQTFDELVKGMGTGLIVTE 372
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
+MG G+N +TGDYS+GA G+++ENG+IQY VEEITI+G L++MF+ + A+ D R+S
Sbjct: 373 VMGQGVNMVTGDYSRGAAGFYVENGEIQYPVEEITIAGNLKDMFRGVQAVSQDFDLRSSI 432
Query: 445 TSGSILIENMIIAG 458
+G+IL+ M IAG
Sbjct: 433 RTGAILLSEMKIAG 446
>gi|354599496|ref|ZP_09017513.1| peptidase U62 modulator of DNA gyrase [Brenneria sp. EniD312]
gi|353677431|gb|EHD23464.1| peptidase U62 modulator of DNA gyrase [Brenneria sp. EniD312]
Length = 446
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 170/451 (37%), Positives = 264/451 (58%), Gaps = 9/451 (1%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
++ + +Q L A+ G+ + + ++ G V R G+++ +E N+D +
Sbjct: 5 TQVAQQRKALEQAVAQALELARA-GSDAAEVAVSKTTGIGVSTRYGEVENVEFNSDGALG 63
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
+ +Y Q K G++S++D ++ T+ AA +IAR+T+ D FAG D++ L + D
Sbjct: 64 ITVYHQQRK----GSASSTDLSPDAIARTVQAALDIARYTSVDPFAGPADKDLLAFDAPD 119
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
L+ P L + +A R E A + I N E + + NSHG + Y
Sbjct: 120 LDLFHPSELDAERGIELAARAEQAALQADKRITNTEGGSFNSHYGIKVFGNSHGMLQSYC 179
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
S+H +S S IA +M+RD Y+ +L PE +G A+RT+SRL +K+ T +
Sbjct: 180 SSRHSMSSSVIAEVNGDMERDYAYTIGRSLDELRTPEWVGAECARRTLSRLSPRKLPTMR 239
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
PVLF A +A L ISG S+YRKSTFL+D LG++I + I E PH+ S
Sbjct: 240 APVLFSAEVATGLFGHLVGAISGGSVYRKSTFLLDKLGRQILPEWLTIEELPHLRKGLAS 299
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
+ FD+EGV+T++R +VK+G++Q + L++YSA+KLGMK+TG++GG H+ I +
Sbjct: 300 TPFDSEGVRTRQREIVKDGVLQTWLLTSYSARKLGMKSTGHAGGIHNWRIAGQGL----D 355
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
+L++M GLLVTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G LQ M
Sbjct: 356 FDALLRQMGKGLLVTELMGQGVSGVTGDYSRGASGFWVENGEIQYPVSEITIAGNLQEML 415
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+ IV +G D+ TR++ GS+L+ M IAG+
Sbjct: 416 RNIVTVGDDIETRSNIQCGSVLLPEMKIAGE 446
>gi|319776607|ref|YP_004139095.1| peptidase protein PmbA [Haemophilus influenzae F3047]
gi|317451198|emb|CBY87431.1| predicted peptidase protein PmbA homologue [Haemophilus influenzae
F3047]
Length = 451
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 173/444 (38%), Positives = 272/444 (61%), Gaps = 8/444 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + A K GAS + + + +G SV R +I+ +E ND + + +Y+
Sbjct: 15 EQELRQAVSFAVELATKAGAS-AEVAVTKVSGLSVSARLQEIENVEFTNDGALGISVYMG 73
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K GN+STSD + ++ + + AA IA++T+ D+ GL D++ + N D +LY
Sbjct: 74 QQK----GNASTSDLSESAIKNAVEAALAIAKYTSPDDCTGLADKDLMAFNAPDLELYHA 129
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+++D A +A R E A + I+N+ + + NSHG + Y S++ +
Sbjct: 130 ADVNVDKATELALRAEKAALEADERIINSNGASFNSHTGVKVYGNSHGMLQSYLSSRYSL 189
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S I ++ D Y+ + + KL P +G AK+ +SRL +K+STR+ PV+F
Sbjct: 190 SCSVIGGVEDALENDYEYTISREFDKLQSPIWVGENCAKKVVSRLNPQKLSTREVPVIFL 249
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L++ FA ISG SLYRKS+FL+D LGK++ I E PH+L S+ FD+E
Sbjct: 250 NDVATGLISHFAAAISGGSLYRKSSFLLDYLGKQVLPDWFNISERPHLLRRLASTPFDSE 309
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+TQ R +V+NGI+Q Y +++YS KKLGM +TG++GG H+ ++ N T L +L+
Sbjct: 310 GVRTQDREIVENGILQTYLVTSYSGKKLGMPSTGHAGGIHNWLVKPNLTG---GLTALLR 366
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+LQ+M K +VA+
Sbjct: 367 QMGTGLLVTDVMGQGVNIVTGDYSRGASGFWVENGEIQYPVAEITIAGQLQDMLKNMVAV 426
Query: 435 GSDVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GSIL++ M I+G
Sbjct: 427 ADDIEHRSNIQTGSILLDKMKISG 450
>gi|59710988|ref|YP_203764.1| peptidase PmbA [Vibrio fischeri ES114]
gi|423685095|ref|ZP_17659903.1| peptidase PmbA [Vibrio fischeri SR5]
gi|59479089|gb|AAW84876.1| predicted peptidase required for the maturation and secretion of
the antibiotic peptide MccB17 [Vibrio fischeri ES114]
gi|371495596|gb|EHN71191.1| peptidase PmbA [Vibrio fischeri SR5]
Length = 447
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 177/453 (39%), Positives = 264/453 (58%), Gaps = 10/453 (2%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
+ + + K E + L+ A + AS + + + G SV G+++ +E N D +
Sbjct: 4 KQQMMNQKIELEAAVAKALDMATQ-HASAAEVAITKTTGISVSTLMGEVENVEFNRDGAL 62
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
+ +Y K G++STSD K++ T+ AA +IA +T+ D F+G + + +
Sbjct: 63 GITVYRGHRK----GSASTSDLSDKAIQQTVAAALDIANYTSEDPFSGPAPKELMAKDIP 118
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ P D A A E A ++S I ++ + + NSHG ++ Y
Sbjct: 119 DLDLFHPDEPEPDYAAQKAIEAEQAALEYHSSIKQSDGASYDSHYGIKVYGNSHGMLASY 178
Query: 188 PFSKHIISISPIAI-KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
P S+ IS S I + K +M+RD Y+ L + +G AAKRT+SRL AKK+ T
Sbjct: 179 PSSRQSISCSVIGVDKNGDMERDYSYTVARHRDDLWDAKKVGLEAAKRTVSRLDAKKLDT 238
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
K PV+F A +A LL ISG +LYRKSTF++D L +KI + E PHIL
Sbjct: 239 MKVPVMFAADVATGLLGHLVMAISGANLYRKSTFMLDKLNEKILPEWFNVSERPHILKGL 298
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
SS FD+EG+ TQ R ++ +G++ Y L++Y+A+KL M TG++GG H+ + S +
Sbjct: 299 ASSPFDSEGLYTQDREIITDGVLATYLLTSYAARKLNMTPTGHAGGIHNWFVKS----TG 354
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+ ++MLK M TGLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L +
Sbjct: 355 QSFEQMLKTMGTGLLVTELMGQGVNTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLAD 414
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M+ IVA+G+DV TR+ +GSILIE+M IAG+
Sbjct: 415 MYHNIVAVGNDVETRSQIQTGSILIESMKIAGQ 447
>gi|399911562|ref|ZP_10779876.1| PmbA protein [Halomonas sp. KM-1]
Length = 448
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 165/441 (37%), Positives = 263/441 (59%), Gaps = 9/441 (2%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+ A+ L A+ +GA + + G + VR+G+++ +E + D+ + V +Y++ K
Sbjct: 16 LESRAEQALALARHLGADACEMGASVDQGIGISVREGEVESVELSRDQGIAVTVYLRGHK 75
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++S++D + S+ + + A IA +T D AGL D + D ++ PW L
Sbjct: 76 ----GSASSTDAGEASIREVVEKAMAIALYTGEDPAAGLADAELMATELPDLDVHHPWPL 131
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A +A CE A + I +E +++ + + ANSHGF+ S+H +S
Sbjct: 132 TTEQAIELALACEA-AGRAEAGIRQSEGASLSSGEGVRVYANSHGFLGSQRGSRHSLSCM 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA MQRD Y+S +P +L +G AA+RT+ RL A++ +T + PV+F+A +
Sbjct: 191 LIAEDANGMQRDYDYTSARNPHELRDAGAVGRKAAERTLQRLGARRPATGRLPVMFDATV 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ I+G SLYR+++FL D LG ++F + E P G+ SS FDN+GV+
Sbjct: 251 ASGLVGHLMSSIAGGSLYRQASFLCDRLGDRLFPDWFTLGERPMERGAMASSPFDNDGVQ 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T+ + ++ G + Y LS YSA++LG++TTGN+GGA +L I + + +E+L +M
Sbjct: 311 TRDNVFIEEGRLASYMLSAYSARRLGLQTTGNAGGARNLRIAAPLA----SREELLARMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
G+LVTELMG G+N +TGDYS+GA G+W+ENG+IQY VEE TI+G L+ MFK + A+GSD
Sbjct: 367 RGVLVTELMGQGVNGVTGDYSRGAAGFWVENGEIQYPVEEFTIAGNLEAMFKGLQAVGSD 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ TR S +GS LI+ M +AG
Sbjct: 427 IDTRGSIHTGSWLIDEMTVAG 447
>gi|28899450|ref|NP_799055.1| peptidase PmbA [Vibrio parahaemolyticus RIMD 2210633]
gi|260363382|ref|ZP_05776234.1| peptidase PmbA [Vibrio parahaemolyticus K5030]
gi|260879316|ref|ZP_05891671.1| peptidase PmbA [Vibrio parahaemolyticus AN-5034]
gi|260895725|ref|ZP_05904221.1| peptidase PmbA [Vibrio parahaemolyticus Peru-466]
gi|28807686|dbj|BAC60939.1| PmbA protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308087416|gb|EFO37111.1| peptidase PmbA [Vibrio parahaemolyticus Peru-466]
gi|308093146|gb|EFO42841.1| peptidase PmbA [Vibrio parahaemolyticus AN-5034]
gi|308111217|gb|EFO48757.1| peptidase PmbA [Vibrio parahaemolyticus K5030]
Length = 447
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 170/447 (38%), Positives = 266/447 (59%), Gaps = 12/447 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
++E +Q L A + + + + G SV R G ++ +E N+D + + +Y
Sbjct: 11 RTELEQAVARALELASA-KSDAAEVAITKSTGLSVSTRMGDVENVEFNSDGALGITVY-- 67
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYT 133
+ G++STSD + ++ T+NAA +IA +T+ D FAG P E ++ P D L+
Sbjct: 68 --RGQRKGSASTSDLSEAAIEQTVNAALDIAHYTSEDPFAGPAPKEFMVKEVP-DLDLFH 124
Query: 134 PWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHI 193
P D A +A E EA +++ I ++ + + NSHG ++ Y S+H
Sbjct: 125 PDSPDPDYAAQVAIAAEKEALSYSDAIKQSDGASYDSHYGVKVYGNSHGLLASYASSRHS 184
Query: 194 ISISPIAI-KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252
S I + K EM+RD Y+ L PE +G AA+ T+SRL A+++ T + P++
Sbjct: 185 TSCCVIGVGKNGEMERDYSYTVARHRDDLWTPETVGRKAAENTVSRLDAQRLKTGQYPIM 244
Query: 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFD 312
F A +A L+ ISG +LYRKS+FL+D LGK++ I E PH+L SS FD
Sbjct: 245 FAADVATGLIGHLVMAISGGNLYRKSSFLLDHLGKQVLPEWFNISERPHVLRGLASSPFD 304
Query: 313 NEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEM 372
+EGV TQ ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S + N K+M
Sbjct: 305 SEGVYTQDCEIITDGVLATYLLTSYAARKMKMDPTGHAGGIHNWYVKS----TGQNFKQM 360
Query: 373 LKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIV 432
LK++ TGLLVTE+MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MF +IV
Sbjct: 361 LKELGTGLLVTEVMGQGVNVVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFTKIV 420
Query: 433 AIGSDVLTRNSNTSGSILIENMIIAGK 459
A+GSD+ TR+ +GSIL++ M +AG+
Sbjct: 421 AVGSDIETRSQIQTGSILLDTMKVAGE 447
>gi|429116867|ref|ZP_19177785.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Cronobacter sakazakii 701]
gi|426319996|emb|CCK03898.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Cronobacter sakazakii 701]
Length = 446
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 165/424 (38%), Positives = 259/424 (61%), Gaps = 10/424 (2%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D ++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPDAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ +++ L + D L+ P + + A A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVAEKDLLAFDAPDLDLFHPAEIEPEQAIDYAARAEQAALKA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + Y ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQSYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ T K PV+F +A L ISG ++YR
Sbjct: 208 ALGDLQSPEWVGEECARRTLSRLSPRKLPTMKAPVIFGREVATGLFGHLVGAISGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV T +R ++K+G++Q + L+
Sbjct: 268 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASTPFDSEGVATSRRDIIKDGVLQQWLLTN 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNL-KEMLKKMNTGLLVTELMGDGINYITG 395
YSA+KLG+K+TG++GG H+ I K +L +++LK+M TGL+VTELMG G++ ITG
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRI-----KGQPSLFEQLLKEMGTGLVVTELMGQGVSGITG 382
Query: 396 DYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMI 455
DYS+GA G+W+ENG+IQY V EITI+G L+ M++ +V IG D+ TR++ GS+L+ M
Sbjct: 383 DYSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNMVTIGDDIETRSNIQCGSVLLPEMK 442
Query: 456 IAGK 459
IAG+
Sbjct: 443 IAGE 446
>gi|156932465|ref|YP_001436381.1| peptidase PmbA [Cronobacter sakazakii ATCC BAA-894]
gi|156530719|gb|ABU75545.1| hypothetical protein ESA_00244 [Cronobacter sakazakii ATCC BAA-894]
Length = 450
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 163/423 (38%), Positives = 257/423 (60%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D ++
Sbjct: 36 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPDAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ +++ L + D L+ P + + A A R E A
Sbjct: 92 TVQAALDIARYTSPDPCAGVAEKDLLAFDAPDLDLFHPAEIEPEQAIDYAARAEQAALKA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + Y ++H +S IA + +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGIKVFGNSHGMLQSYCSTRHSLSSCVIAEENGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ T K PV+F +A L ISG ++YR
Sbjct: 212 ALGDLQSPEWVGEECARRTLSRLSPRKLPTMKAPVIFGREVATGLFGHLVGAISGGAVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV T +R ++K+G++Q + L+
Sbjct: 272 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASTPFDSEGVATSRRDIIKDGVLQQWLLTN 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIKGRGL----SFEQLLKEMGTGLVVTELMGQGVSGITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ +V IG D+ TR++ GS+L+ M I
Sbjct: 388 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNMVTIGDDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGE 450
>gi|386017308|ref|YP_005935606.1| protein PmbA [Pantoea ananatis AJ13355]
gi|327395388|dbj|BAK12810.1| protein PmbA [Pantoea ananatis AJ13355]
Length = 446
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 169/445 (37%), Positives = 261/445 (58%), Gaps = 9/445 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
++ +Q L AK + + ++ G V R G+++ +E N+D + + +Y Q
Sbjct: 11 RTALEQAIAQALELAKA-STDGAEVAVSKTTGIGVSTRYGEVENVEFNSDGALGITVYHQ 69
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
+ K G++S++D ++ T+ AA +IAR+T+ D FAG D L D LY P
Sbjct: 70 NRK----GSASSTDLSPDAIKRTVQAAIDIARYTSPDPFAGPADAELLAYEAPDLDLYHP 125
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
W + D A +A + E A + I N E + + NSHG + Y S+H +
Sbjct: 126 WEIDADYAIKLAAQAEQAALQADKRITNTEGGSFNSHIGIKVFGNSHGMLQSYCSSRHSL 185
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S IA + M+RD Y+ L P+ +G A+RT+SRL +K+ T K PV+F
Sbjct: 186 SSCVIAEQDGNMERDYAYTIGRAIDDLKSPDWVGAECARRTLSRLAPRKLDTMKAPVIFA 245
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L ISG+S+YRKSTFL+D++GK+I + I E PH+L S+ FD+E
Sbjct: 246 PEVATGLFGHLVGAISGSSVYRKSTFLLDAMGKQILPEWLTIQEQPHLLKGLASTPFDSE 305
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+TQ R ++K+G++Q + +++YSA+KLG+ +TG++GG H+ I + MLK
Sbjct: 306 GVRTQARDIIKDGVLQTWLMTSYSARKLGLTSTGHAGGIHNWRIAGQ----GHSFDAMLK 361
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L +M++ IV +
Sbjct: 362 QMGTGLVVTELMGQGVSAITGDYSRGAAGFWVENGEIQYPVSEITIAGNLGDMWRNIVTV 421
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
G D+ TR++ GS+L+ M IAG+
Sbjct: 422 GDDIETRSNIQCGSVLLPEMYIAGQ 446
>gi|407686020|ref|YP_006801193.1| pmbA protein [Alteromonas macleodii str. 'Balearic Sea AD45']
gi|407289400|gb|AFT93712.1| pmbA protein [Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 443
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 174/443 (39%), Positives = 256/443 (57%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
++ Q + D+L A GA+ + ++ G +V R +++ +E ND + + +Y+
Sbjct: 8 ADIQNVVDDVLKLALSKGATQAEASMSKVQGIAVSSRMQEVENVEFTNDGGLGISVYV-- 65
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
GK+ G++ST+D K +L + A +IAR+T+ D GL D + + D LY P
Sbjct: 66 GKRK--GSASTADLSKAALTLAVEKAVDIARYTSEDPCTGLADADLIATEFPDLDLYHPE 123
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L + A A E A N++S I N++ + N+HG +GYP S++ +S
Sbjct: 124 ELDTEKAIKTAIEAETAAMNYDSRITNSDGASYNANLGMRVYGNTHGINAGYPSSRYSLS 183
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD Y+ + L +G AAK T+ RL A+KI+T PVL
Sbjct: 184 CMVIGAQDNDMQRDYAYTVSRKASLLQSASAVGIDAAKATVDRLGARKINTANVPVLLHR 243
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L + ISG SLYR+S+FL+DSLGK++F + I E P I G SSSFDNEG
Sbjct: 244 DIASSLFGHYVGAISGGSLYRRSSFLLDSLGKQVFPEWLNIEERPFIKGGLASSSFDNEG 303
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V +V G + Y +TYS++KL ++ G++GG H+ ++ T SD E+LK+
Sbjct: 304 VACSDMTIVDAGKLATYLYTTYSSRKLNTRSNGHAGGIHNWLV--GDTGHSD--AELLKE 359
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGL VTELMG G+N +TGDYS+GA GYW+ENG IQY V E+TI+G L++MFK IVAIG
Sbjct: 360 MGTGLFVTELMGQGVNGVTGDYSRGAAGYWVENGIIQYPVHEVTIAGNLKDMFKGIVAIG 419
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
++ R S +GS+LI+ M IAG
Sbjct: 420 AEKDVRGSVQTGSVLIDQMKIAG 442
>gi|126208209|ref|YP_001053434.1| antibiotic maturation factor [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|126097001|gb|ABN73829.1| antibiotic maturation factor [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
Length = 449
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 174/445 (39%), Positives = 275/445 (61%), Gaps = 8/445 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + LN+AKK GA + + + G SV R + + IE NND ++ + +Y+
Sbjct: 13 EQELRQAVEFALNFAKKSGA-EAEVGVTKVAGLSVSTRLEQTENIEFNNDGSLGISVYV- 70
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
GK+ GN+STSD +S+ + +A IA++T+ D AGL D+ + D +LY
Sbjct: 71 -GKRK--GNASTSDLQPQSIQRAVESALAIAKYTSEDECAGLADKEMMAFEAPDLELYHQ 127
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+SI+ A +A E+ A N + IVN+E + + N+HG + Y S++ +
Sbjct: 128 ADISIEQAVELALEAEHHALNADEKIVNSEGATFNSHSGVRVYGNTHGMLQSYLSSRYSL 187
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S I+ +++RD Y+ + + KL P+ IG AA + + RL +KI T + PV+F
Sbjct: 188 SCSVISAYEDQLERDYEYTISREFDKLQSPKWIGRQAAFKAVDRLNPQKIKTCEVPVIFY 247
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L+ A ISG +LYRKS+FL+D LG +I S I E PH+L SS+FD+E
Sbjct: 248 NDVATGLIGHLAGAISGGALYRKSSFLLDKLGTQILPSWFAISERPHLLRQLASSAFDSE 307
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV TQ R ++ +G++Q Y +++YSA+K+G+KTTG++GG H+ ++ N+T D L LK
Sbjct: 308 GVITQDREIITDGVLQTYLMTSYSARKMGLKTTGHAGGIHNWLVKPNRTGGLDTL---LK 364
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M +GLL TE +G IN +TG+YS+GA G+W+ENG+IQY V EITI+G+LQ M+K ++A+
Sbjct: 365 EMGSGLLATEFLGSAINAVTGEYSRGAAGFWVENGEIQYPVAEITIAGQLQEMYKNLIAV 424
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
D+ R++ +GSIL++ M I+G+
Sbjct: 425 ADDIEHRSNIQTGSILLDKMKISGE 449
>gi|398791858|ref|ZP_10552559.1| putative Zn-dependent protease-like protein [Pantoea sp. YR343]
gi|398214586|gb|EJN01162.1| putative Zn-dependent protease-like protein [Pantoea sp. YR343]
Length = 446
Score = 320 bits (820), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 165/442 (37%), Positives = 258/442 (58%), Gaps = 9/442 (2%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+Q L AK + + + G V R G+++ +E N+D + + +Y Q+ K
Sbjct: 14 LEQAVAQALELAKA-STDGAEVAVTKTTGIGVSTRYGEVENVEFNSDGALGITVYHQNRK 72
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++S++D ++ T+ AA +IAR+T+ D F D L D LY PW +
Sbjct: 73 ----GSASSTDLSPDAIKRTVQAAIDIARYTSVDPFGAPADPELLAFEAPDLDLYHPWEI 128
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A +A + E + + I N E + + NSHG + Y S+H +S
Sbjct: 129 DADRAIELAAQAEQASLQADKRITNTEGGSFNSHVGIKVFGNSHGMLQSYCSSRHSLSSC 188
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA + M+RD Y+ L + +G A+R ++RL +K+ST K PV+F +
Sbjct: 189 VIAEQDGNMERDYAYTIGRSFDDLKSADWVGAECARRVLARLAPRKLSTMKAPVIFAPEV 248
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L +ISG+S+YRKSTFL+DSLGK+I + I E PH+L S+ FD+EGV+
Sbjct: 249 ATGLFGHLVGMISGSSVYRKSTFLLDSLGKQILPEWLTIEEHPHLLKGLASTPFDSEGVR 308
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
TQ R ++K+G++Q + L++YSA+KLG+++TG++GG H+ I + +MLK+M
Sbjct: 309 TQSRDIIKDGVLQNWLLTSYSARKLGLQSTGHAGGIHNWRIAGQ----GHSFDDMLKQMG 364
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGL+VTE+MG IN +TGDYS+GA G+W+ENG+IQY V EITI+G L++M+ +V +G+D
Sbjct: 365 TGLVVTEMMGSSINGMTGDYSRGASGFWVENGEIQYPVSEITIAGNLKDMWLNMVTVGND 424
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
+ TR++ GS+L+ M IAG+
Sbjct: 425 IETRSNIQCGSVLLPEMKIAGQ 446
>gi|389839541|ref|YP_006341625.1| peptidase PmbA [Cronobacter sakazakii ES15]
gi|417789457|ref|ZP_12437106.1| peptidase PmbA [Cronobacter sakazakii E899]
gi|429121254|ref|ZP_19181893.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Cronobacter sakazakii 680]
gi|449306759|ref|YP_007439115.1| peptidase PmbA [Cronobacter sakazakii SP291]
gi|333956447|gb|EGL74101.1| peptidase PmbA [Cronobacter sakazakii E899]
gi|387850017|gb|AFJ98114.1| peptidase PmbA [Cronobacter sakazakii ES15]
gi|426324287|emb|CCK12630.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Cronobacter sakazakii 680]
gi|449096792|gb|AGE84826.1| peptidase PmbA [Cronobacter sakazakii SP291]
Length = 446
Score = 320 bits (820), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 163/423 (38%), Positives = 257/423 (60%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D ++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPDAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ +++ L + D L+ P + + A A R E A
Sbjct: 88 TVQAALDIARYTSPDPCAGVAEKDLLAFDAPDLDLFHPAEIEPEQAIDYAARAEQAALKA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + Y ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQSYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ T K PV+F +A L ISG ++YR
Sbjct: 208 ALGDLQSPEWVGEECARRTLSRLSPRKLPTMKAPVIFGREVATGLFGHLVGAISGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV T +R ++K+G++Q + L+
Sbjct: 268 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASTPFDSEGVATSRRDIIKDGVLQQWLLTN 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIKGRGL----SFEQLLKEMGTGLVVTELMGQGVSGITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ +V IG D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNMVTIGDDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGE 446
>gi|343509340|ref|ZP_08746619.1| peptidase PmbA [Vibrio scophthalmi LMG 19158]
gi|343517135|ref|ZP_08754147.1| peptidase PmbA [Vibrio sp. N418]
gi|342794417|gb|EGU30188.1| peptidase PmbA [Vibrio sp. N418]
gi|342804838|gb|EGU40134.1| peptidase PmbA [Vibrio scophthalmi LMG 19158]
Length = 447
Score = 320 bits (820), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 174/454 (38%), Positives = 271/454 (59%), Gaps = 12/454 (2%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
R + + E + L A + A + + ++ G SV R +++ +E N+D +
Sbjct: 4 REQVAQQRVELEAAVAKALEMAA-VKADAAEVAISKSTGLSVSTRMCEVENVEFNSDGAL 62
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAG-LPDENTLEMNP 126
+ +Y K G++STSD +K++ T+ AA +IA++T+ D FAG P E ++ P
Sbjct: 63 GITVYRGQRK----GSASTSDLSEKAIQQTVMAALDIAQYTSEDPFAGPAPKEFMVQEIP 118
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D L+ P D A +A E A ++S I ++ + + NSHG ++
Sbjct: 119 -DLDLFHPDTPDPDYAAQVAIAAEKRALEYSSKIKQSDGASYDSHYGVKVYGNSHGLLAS 177
Query: 187 YPFSKHIISISPIAIKGK-EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
Y S+H S I EM+RD Y+ +L PE +G AA++T+SRL AK+++
Sbjct: 178 YASSRHSTSCCVIGQGANGEMERDYSYTMARHKDELWTPEQVGQLAAEKTVSRLDAKRLA 237
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
T K PV+F A +A LL ISG +LYRKS+FL+D LGK+I S + E PHIL
Sbjct: 238 TGKYPVMFAADVATGLLGHLVMAISGGNLYRKSSFLLDHLGKQILPSWFNVSERPHILRG 297
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
SS FD+EGV T+ ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S +
Sbjct: 298 LASSPFDSEGVFTKDCEIITDGVLATYLLTSYAARKMKMDPTGHAGGIHNWFVQS----T 353
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
+ ++MLK++ TG LVTE+MG G+N +TGDYS+GA G+W+ENG+IQY V E+TI+G L+
Sbjct: 354 GQDYQQMLKELGTGFLVTEVMGQGVNTVTGDYSRGAAGFWVENGEIQYPVSEVTIAGNLK 413
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+MF+QIVA+GSDV TR+ +GSIL+E+M +AG+
Sbjct: 414 DMFQQIVAVGSDVETRSQIQTGSILLESMKVAGE 447
>gi|429084994|ref|ZP_19147978.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Cronobacter condimenti 1330]
gi|426545834|emb|CCJ74019.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Cronobacter condimenti 1330]
Length = 446
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 163/423 (38%), Positives = 257/423 (60%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D ++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPDAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ +++ L D L+ P + + A A R E +
Sbjct: 88 TVQAALDIARYTSPDPCAGVAEKDLLAFEAPDLDLFHPAEIEPEQAIDYAARAEQASLKA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + Y S+H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQSYCSSRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L+ PE +G A+RT+SRL +K+ T K PV+F +A L ISG ++YR
Sbjct: 208 ALGDLESPEWVGEECARRTLSRLSPRKLPTMKAPVIFGREVATGLFGHLVGAISGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV T +R ++K+G++Q + L+
Sbjct: 268 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASTPFDSEGVATSRRDIIKDGVLQQWLLTN 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRIKGRGL----SFEQLLKEMGTGLVVTELMGQGVSGITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ +V IG D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNMVTIGDDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGE 446
>gi|145637096|ref|ZP_01792759.1| anaerobic ribonucleotide reductase-activating protein [Haemophilus
influenzae PittHH]
gi|145269750|gb|EDK09690.1| anaerobic ribonucleotide reductase-activating protein [Haemophilus
influenzae PittHH]
Length = 451
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 175/447 (39%), Positives = 276/447 (61%), Gaps = 11/447 (2%)
Query: 15 KSEFQQLAQDM---LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVII 71
K++ Q+L Q + + A K GAS + + + +G SV R +I+ +E ND + + +
Sbjct: 12 KAQEQELRQAVSFAVELATKAGAS-AEVAVTKVSGLSVSARLQEIENVEFTNDGALGISV 70
Query: 72 YIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKL 131
Y+ K GN+STSD + ++ + + AA IA++T+ D+ GL D++ + N D +L
Sbjct: 71 YMGQQK----GNASTSDLSESAIKNAVEAALAIAKYTSPDDCTGLADKDLMAFNVPDLEL 126
Query: 132 YTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSK 191
Y + +D A +A + E A + I+N+ T+ + NSHG + Y S+
Sbjct: 127 YHAADVDVDKATELALQAEKAALEADERIINSNGASFTSHTGVKVYGNSHGMLQSYLSSR 186
Query: 192 HIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPV 251
+ +S S I ++ D Y+ + + KL P +G AK+ +SRL +K+STR+ PV
Sbjct: 187 YSLSCSVIGGVEDALENDYEYTISREFDKLQSPIWVGENCAKKVVSRLNPQKLSTREVPV 246
Query: 252 LFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSF 311
+F +A L++ FA ISG SLYRKS+FL+D LGK++ I E PH+L S+ F
Sbjct: 247 IFLNDVATGLISHFAAAISGGSLYRKSSFLLDYLGKQVLPDWFNISERPHLLRRLASTPF 306
Query: 312 DNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKE 371
D+EGV+TQ R +V+NGI+Q Y +++YS KKLGM +TG++GG H+ ++ N T L
Sbjct: 307 DSEGVRTQDREIVENGILQTYLVTSYSGKKLGMPSTGHAGGIHNWLVKPNLTG---GLTA 363
Query: 372 MLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQI 431
+L++M TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+LQ+M K +
Sbjct: 364 LLREMGTGLLVTDVMGQGVNIVTGDYSRGASGFWVENGEIQYPVAEITIAGQLQDMLKNM 423
Query: 432 VAIGSDVLTRNSNTSGSILIENMIIAG 458
VA+ D+ R++ +GSIL++ M I+G
Sbjct: 424 VAVADDIEHRSNIQTGSILLDKMKISG 450
>gi|419953418|ref|ZP_14469563.1| PmbA protein [Pseudomonas stutzeri TS44]
gi|387970010|gb|EIK54290.1| PmbA protein [Pseudomonas stutzeri TS44]
Length = 448
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 170/442 (38%), Positives = 268/442 (60%), Gaps = 8/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++ + +++ A++ GAS S + + G S VR+G+++ +E N D+ + +Y+ K
Sbjct: 15 LREKVERIIDEARRQGASASEVSVSMEQGLSTSVRQGEVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST+ ++ +T+ AA IA+ + D FAGL D + D L+ PW +
Sbjct: 75 ----GSASTTGSGDAAIRETVAAALAIAQHASEDEFAGLADAALMARELPDLDLFHPWPV 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
S + A A RCE AF + I N + T + T Q NS+GF+ Y ++H +S
Sbjct: 131 SPEQAIETALRCEAAAFAVDPHIRNADGTSLNTHQGCRAYGNSNGFIGSYCSTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD +Y + L P IG AA+R + RL A+ + T + PVLF A L
Sbjct: 191 MIAEHAGQMQRDYYYDVSRRADTLADPLSIGRRAAERAVRRLGARPVPTCEVPVLFAADL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG++LYRK+++L ++LG+ +F + + E PH+ + GS+S+D +G+
Sbjct: 251 ATGLFGHFLAAISGSNLYRKASYLENALGQILFPEWLSLDERPHLAQALGSASYDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+NG + Y L TYS +KLG+ +T N+GG H+L + + ++ +L++M
Sbjct: 311 TYAKPFVENGQLISYVLGTYSGRKLGLPSTANAGGVHNLFV----SHGEEDQAALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ+ V+E+TI+G L++MF+QIVA+G D
Sbjct: 367 RGLLVTELMGQGLNLVTGDYSRGAGGYWVENGEIQFPVQEVTIAGNLRDMFRQIVAVGCD 426
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
TR++ +GS+LIE M +AGK
Sbjct: 427 TETRSNIRTGSVLIERMTVAGK 448
>gi|372276555|ref|ZP_09512591.1| peptidase PmbA [Pantoea sp. SL1_M5]
gi|390435491|ref|ZP_10224029.1| peptidase PmbA [Pantoea agglomerans IG1]
Length = 446
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 173/441 (39%), Positives = 267/441 (60%), Gaps = 10/441 (2%)
Query: 19 QQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKK 78
Q +AQ L AK + + ++ G V R G+++ +E N+D + + +Y Q+ K
Sbjct: 16 QAIAQ-ALELAKA-STDSAEVAVSKTTGIGVSTRYGEVENVEFNSDGALGITVYHQNRK- 72
Query: 79 MFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLS 138
G++S++D ++ T+ AA +IAR+T+ D FAG D L + D LY PW +
Sbjct: 73 ---GSASSTDLSPDAIKRTVQAAIDIARYTSPDPFAGPADAELLAYDAPDLDLYHPWEID 129
Query: 139 IDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISP 198
D A +A + E + + I N E + + NSHG + Y S+H +S S
Sbjct: 130 ADRAIELAAQAEQASLRADKRITNTEGGSFNSHVGIKVFGNSHGMLQSYCSSRHSLSSSV 189
Query: 199 IAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLA 258
IA + M+RD Y+ + L PE +G A+RT+SRL +K+ T K PV+F + +A
Sbjct: 190 IAEQDGNMERDYAYTIGRAFEDLKSPEWVGAECARRTLSRLAPRKLPTMKAPVIFASEVA 249
Query: 259 FELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKT 318
L ISG ++YRKSTFL+DS+G++I + I E PH+L S+ FD+EGV+T
Sbjct: 250 TGLFGHLVGAISGGNVYRKSTFLLDSMGQQILPEWLTINEQPHLLKGLASTPFDSEGVRT 309
Query: 319 QKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNT 378
Q R ++K+G++Q + L++YSA+KLG+ +TG++GG H+ I+ + S D+L LK+M T
Sbjct: 310 QARDIIKDGVLQTWLLTSYSARKLGLTSTGHAGGIHNW-RIAGQGHSFDDL---LKQMGT 365
Query: 379 GLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDV 438
GL+VTELMG G++ ITGDYS+GA G+W+ENG IQY V E+TI+G L+ M++ +V IG D+
Sbjct: 366 GLVVTELMGQGVSAITGDYSRGAAGFWVENGVIQYPVSEVTIAGNLKEMWRNMVTIGDDI 425
Query: 439 LTRNSNTSGSILIENMIIAGK 459
TR++ GS+L+ M IAG+
Sbjct: 426 ETRSNIQCGSVLLPEMKIAGQ 446
>gi|421503304|ref|ZP_15950254.1| C69 family peptidase [Pseudomonas mendocina DLHK]
gi|400346097|gb|EJO94457.1| C69 family peptidase [Pseudomonas mendocina DLHK]
Length = 448
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 172/441 (39%), Positives = 266/441 (60%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q+ + +L A + GAS + + G G S VR+G+++ +E N D+ + +Y+ K
Sbjct: 15 LQEQVEAILAEAARQGASACEVAVSAGQGLSTTVRQGEVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++STS + ++ +T+ AA IA+ + D AGL D + + + LY PW +
Sbjct: 75 ----GSASTSATGEAAIRETVAAALAIAKHASEDECAGLADAALMARDLPELDLYHPWSI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + A A CE AF ++ I N + T + T Q + NS+GF+ GY ++H +S
Sbjct: 131 TPEQAVEQALACEAAAFAADARIKNADGTSLNTHQGCRVYGNSNGFIGGYASTRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD WY N + L P IG AA+R +SRL A+ + T + PVLF A L
Sbjct: 191 MIAEGEGQMQRDYWYDVNRQGELLADPAGIGQRAAERAVSRLGARPVPTCEVPVLFAAEL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L + ISG +LYR S+FL +LG+ +F + + E PH+ + GS++FD +G+
Sbjct: 251 AGGLFSHLLAAISGGNLYRHSSFLEGALGQCLFPEWLSLDERPHLPRALGSAAFDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L TYS +KLG+ +T NSGG H+L + T ++ + +L++M
Sbjct: 311 TYAKPFVEKGELVSYVLGTYSGRKLGLPSTANSGGVHNLFV----THGDEDQQALLRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G L++MF+QIVA+G D
Sbjct: 367 RGLLVTELMGQGLNLVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNLRDMFRQIVAVGRD 426
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ R + +GS+LIE M +AG
Sbjct: 427 LERRGNICTGSVLIEKMTVAG 447
>gi|407682138|ref|YP_006797312.1| pmbA protein [Alteromonas macleodii str. 'English Channel 673']
gi|407243749|gb|AFT72935.1| pmbA protein [Alteromonas macleodii str. 'English Channel 673']
Length = 443
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 173/443 (39%), Positives = 256/443 (57%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
++ Q + D+L A GA+ + ++ G +V R +++ +E ND + + +Y+
Sbjct: 8 ADIQNVVDDVLKLALSKGATQAEASMSKVQGIAVSSRMQEVENVEFTNDGGLGISVYV-- 65
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
GK+ G++ST+D K +L + A +IAR+T+ D GL D + + D LY P
Sbjct: 66 GKRK--GSASTADLSKAALTLAVEKAVDIARYTSEDPCTGLADADLIATEFPDLDLYHPE 123
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L + A A E A N++S I N++ + N+HG +GYP S++ +S
Sbjct: 124 ELDTEKAIKTAIEAETAAMNYDSRITNSDGASYNANLGMRVYGNTHGINAGYPSSRYSLS 183
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD Y+ + L +G AAK T+ RL A+KI+T PVL
Sbjct: 184 CMVIGAQDNDMQRDYAYTVSRKASLLQSASAVGIEAAKATVDRLGARKINTANVPVLLHR 243
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L + ISG SLYR+S+FL+DSLGK++F + I E P I G SSSFDNEG
Sbjct: 244 DIASSLFGHYVGAISGGSLYRRSSFLLDSLGKQVFPEWLNIEERPFIKGGLASSSFDNEG 303
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V +V G + Y +TYS++KL ++ G++GG H+ ++ T SD ++LK+
Sbjct: 304 VACSDMTIVDGGKLATYLYTTYSSRKLNTRSNGHAGGIHNWLV--GDTGHSD--ADLLKE 359
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGL VTELMG G+N +TGDYS+GA GYW+ENG IQY V E+TI+G L++MFK IVAIG
Sbjct: 360 MGTGLFVTELMGQGVNGVTGDYSRGAAGYWVENGIIQYPVHEVTIAGNLKDMFKGIVAIG 419
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
++ R S +GS+LI+ M IAG
Sbjct: 420 AEKDVRGSVQTGSVLIDQMKIAG 442
>gi|317494060|ref|ZP_07952476.1| PmbA protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917833|gb|EFV39176.1| PmbA protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 446
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 168/429 (39%), Positives = 259/429 (60%), Gaps = 8/429 (1%)
Query: 31 KIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFC 90
K GA + + + G S+ R G+++ +E N+D + + +Y Q K G++S++D
Sbjct: 26 KAGADAAEVAVTKTTGISISTRFGEVENVEFNSDGALGITVYHQQRK----GSASSTDLS 81
Query: 91 KKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCE 150
++ T+ AA +IAR+T+ D FAG D+ L + D L+ P L + +A R E
Sbjct: 82 PDAIARTVQAALDIARYTSPDPFAGPADKELLAFDAPDLDLFHPAELDAERGIELAARAE 141
Query: 151 NEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDN 210
+ F+ I N E + + NSHG + Y S+H +S IA +M+RD
Sbjct: 142 QSSLKFDPRITNTEGGSFNSHYGIKVFGNSHGMLQSYSSSRHSLSSCVIAEHDGDMERDY 201
Query: 211 WYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLIS 270
Y+ D L PE +G A+RT+SRL +++ T + PV+F A +A L IS
Sbjct: 202 AYTIARDINDLKSPEWVGEECARRTLSRLAPRRLPTMEAPVMFAAEVATGLFGHLVGAIS 261
Query: 271 GNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQ 330
G+S+YRKSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T +R +V+NG++Q
Sbjct: 262 GSSVYRKSTFLLDSLGKQILPEWLTINEQPHLLKGMASTPFDSEGVRTVERNIVENGVLQ 321
Query: 331 GYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGI 390
+ +++YSA+KLGM++TG++GG H+ I ++MLKKM TG LVTELMG G+
Sbjct: 322 TWLMTSYSARKLGMQSTGHAGGIHNWRIKGQGL----GFEDMLKKMGTGFLVTELMGQGV 377
Query: 391 NYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSIL 450
+ +TGDYS+GA G+W+ENG+IQY V E+TI+G L++M+ +V +G D+ R++ GS L
Sbjct: 378 SGVTGDYSRGAAGFWVENGEIQYPVSEVTIAGNLKDMWSNLVTLGDDIELRSNIQCGSAL 437
Query: 451 IENMIIAGK 459
+E M IAG+
Sbjct: 438 LEAMKIAGE 446
>gi|429097999|ref|ZP_19160105.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Cronobacter dublinensis 582]
gi|426284339|emb|CCJ86218.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Cronobacter dublinensis 582]
Length = 446
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 161/423 (38%), Positives = 259/423 (61%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D ++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPDAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ +++ L + D L+ P + + A A R E +
Sbjct: 88 TVQAALDIARYTSPDPYAGVAEKDLLAFDAPDLDLFHPAEIEPEQAIEYAARAEQASLKA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + Y ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQSYSSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
+ L PE +G A+RT+SRL +K+ T K PV+F +A L ISG ++YR
Sbjct: 208 ALEDLASPEWVGEECARRTLSRLSPRKLPTMKAPVIFGREVATGLFGHLVGAISGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+ S+ FD+EGV T +R ++K+G++Q + L++
Sbjct: 268 KSTFLLDSLGKQILPEWLTIEEHPHLRKGLASTPFDSEGVATSRRDIIKDGVLQQWLLTS 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRINGRGL----SFEQLLKEMGTGLVVTELMGQGVSGITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ +V IG D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNMVTIGDDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGE 446
>gi|365838752|ref|ZP_09380090.1| protein PmbA [Hafnia alvei ATCC 51873]
gi|364559545|gb|EHM37528.1| protein PmbA [Hafnia alvei ATCC 51873]
Length = 446
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 168/429 (39%), Positives = 259/429 (60%), Gaps = 8/429 (1%)
Query: 31 KIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFC 90
K GA + + + G S+ R G+++ +E N+D + + +Y Q K G++S++D
Sbjct: 26 KAGADAAEVAVTKTTGISISTRFGEVENVEFNSDGALGITVYHQQRK----GSASSTDLS 81
Query: 91 KKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCE 150
++ T+ AA +IAR+T+ D FAG D+ L + D L+ P L + +A R E
Sbjct: 82 PDAIARTVQAALDIARYTSPDPFAGPADKELLAFDAPDLDLFHPAELDAERGIELAARAE 141
Query: 151 NEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDN 210
+ F+ I N E + + NSHG + Y S+H +S IA +M+RD
Sbjct: 142 QSSLKFDPRITNTEGGSFNSHYGIKVFGNSHGMLQSYSSSRHSLSSCVIAEHEGDMERDY 201
Query: 211 WYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLIS 270
Y+ D L PE +G A+RT+SRL +++ T + PV+F A +A L IS
Sbjct: 202 AYTIARDINDLKSPEWVGEECARRTLSRLAPRRLPTMEAPVMFAAEVATGLFGHLVGAIS 261
Query: 271 GNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQ 330
G+S+YRKSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T +R +V+NG++Q
Sbjct: 262 GSSVYRKSTFLLDSLGKQILPEWLTINEQPHLLKGMASTPFDSEGVRTVERNIVENGVLQ 321
Query: 331 GYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGI 390
+ +++YSA+KLGM++TG++GG H+ I ++MLKKM TG LVTELMG G+
Sbjct: 322 TWLMTSYSARKLGMQSTGHAGGIHNWRIKGQGL----GFEDMLKKMGTGFLVTELMGQGV 377
Query: 391 NYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSIL 450
+ +TGDYS+GA G+W+ENG+IQY V E+TI+G L++M+ +V +G D+ R++ GS L
Sbjct: 378 SGVTGDYSRGAAGFWVENGEIQYPVSEVTIAGNLKDMWSNLVTLGDDIELRSNIQCGSAL 437
Query: 451 IENMIIAGK 459
+E M IAG+
Sbjct: 438 LEAMKIAGE 446
>gi|238797948|ref|ZP_04641439.1| Protein pmbA [Yersinia mollaretii ATCC 43969]
gi|238718253|gb|EEQ10078.1| Protein pmbA [Yersinia mollaretii ATCC 43969]
Length = 446
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/455 (37%), Positives = 269/455 (59%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K ++ + +Q L A+ G+ + + ++ G SV R G+++ +E N+D
Sbjct: 1 MKVVTQVAEQRKTLEQAVAQALELARA-GSDAAEVAVSKTTGISVSTRFGEVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q K G++ST+D ++ T+ AA +IAR+T+ D +AG +++ L
Sbjct: 60 GALGITVYHQQRK----GSASTTDLNPDAVARTVQAALDIARYTSPDPYAGPAEKSLLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
D L+ P L + L+A R E A + I N E + + NSHG +
Sbjct: 116 EAPDLDLFHPSDLDAEQGILLAARAEQAALQADKRITNTEGGSFNSHYGIKVFGNSHGML 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S+H +S S IA +M+RD Y+ + L PE +G A+RT+SRL +K+
Sbjct: 176 QSYCSSRHSLSSSVIAEHNGDMERDYAYTIGRRMEDLANPEWVGEECARRTLSRLSPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
T + PVLF A +A L ISG ++YRKSTFL+D LGK+I + I E PH+L
Sbjct: 236 PTMQSPVLFAAEVATGLFGHLVSAISGGNIYRKSTFLLDHLGKQILPEWLTIEEHPHLLR 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+T +R +VK+G++Q Y L++YSA+KLG+++TG++GG H+ I
Sbjct: 296 GLASTPFDSEGVRTLQREIVKDGVLQTYLLTSYSARKLGLQSTGHAGGIHNWRIAGQ--- 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ MLK+++ GL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L
Sbjct: 353 -GQDFAGMLKQLDKGLVVTELMGQGVSTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+ M + IV++GSD+ R++ GS+L+ M IAG+
Sbjct: 412 KEMLRNIVSVGSDIEIRSNIQCGSVLLPAMKIAGE 446
>gi|238754632|ref|ZP_04615985.1| Protein pmbA [Yersinia ruckeri ATCC 29473]
gi|238707091|gb|EEP99455.1| Protein pmbA [Yersinia ruckeri ATCC 29473]
Length = 446
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 172/455 (37%), Positives = 269/455 (59%), Gaps = 9/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
+K ++ + +Q L A+ G+ + + + G SV R G+++ +E N+D
Sbjct: 1 MKVVTQVAEQRKTLEQAVAQALELARA-GSDAAEVAVTKTTGISVSTRFGEVENVEFNSD 59
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +Y Q K G++ST+D ++ T+ AA +IAR+T+ D +AG +++ L
Sbjct: 60 GALGITVYHQQRK----GSASTTDLNPDAVARTVQAALDIARYTSPDPYAGPAEQSLLAF 115
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
+ D L+ P L + +A R E A + I N E + + NS G +
Sbjct: 116 DAPDLDLFHPAELDAEHGIQLAARAEQSALQADKRITNTEGGSFNSHYGIKVFGNSQGML 175
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S+H IS S IA +M+RD YS + + L PE +G A+RT+SRL +K+
Sbjct: 176 QSYCSSRHSISSSVIAEHDGDMERDYAYSISRRMEDLASPEWVGEECARRTLSRLSPRKL 235
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
T K PVLF A +A L ISG ++YRKSTFL+D LGK+I + I E PH+L
Sbjct: 236 PTMKAPVLFAAEVATGLFGHLVSAISGGNIYRKSTFLLDHLGKQILPEWLTIEEHPHLLR 295
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV+T +R +VK+G++Q Y L++YSA+KLG+++TG++GG H+ I
Sbjct: 296 GLASTPFDSEGVRTSQRDIVKDGVLQTYLLTSYSARKLGLQSTGHAGGIHNWRIAGQGL- 354
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ MLK+M GL+VTELMG G++ +TGDYS+GA G+W+ENG+IQ+ V EITI+G L
Sbjct: 355 ---DFDGMLKQMGKGLVVTELMGQGVSTVTGDYSRGAAGFWVENGEIQFPVSEITIAGNL 411
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M + +V++GSD+ TR++ GS+L+ M IAG+
Sbjct: 412 KDMLRHMVSVGSDIETRSNIQCGSVLLPEMKIAGE 446
>gi|24375565|ref|NP_719608.1| microcin-processing peptidase TldE [Shewanella oneidensis MR-1]
gi|24350450|gb|AAN57052.1| microcin-processing peptidase TldE [Shewanella oneidensis MR-1]
Length = 447
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 165/434 (38%), Positives = 266/434 (61%), Gaps = 9/434 (2%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YA K+G + + + ++ G SV R +++ +E N D + + +Y +DG K G+SS
Sbjct: 21 LEYANKLGTNAAEVAISKQQGLSVSTRLKEVETVEFNKDGALGITVY-RDGCK---GSSS 76
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ + AA +IAR+T++D F+GL D+ + D KLY P +S D+ +
Sbjct: 77 TSDLSPEAIALAVKAADDIARYTSADPFSGLADKALMATEIRDLKLYYPQEISADELAQL 136
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIA-IKGK 204
A R E A + + I N++ S + NSHGF++GY S++ +S S I +
Sbjct: 137 AIRAETAALDADPRINNSDGASANAHTSVKVYGNSHGFLNGYCSSRYSLSCSVIGEDRNG 196
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
MQRD Y+ ++ PE +G A++T+SRL A+KI+T + P+L +A L+
Sbjct: 197 NMQRDYDYTIARKFNEMLSPESVGLKTAEKTVSRLGARKIATTRLPILLAPEIATGLIGH 256
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
ISG SLYRKS+FL+D++ +IF I E PH+LG+ S+++D+EGV TQ R ++
Sbjct: 257 LIGAISGGSLYRKSSFLLDAIHTQIFPDWFSIEEQPHLLGALASANYDSEGVATQDRRII 316
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
G+++ Y L++YSA+KL + TG++GG ++ + + E++K M TGL+VTE
Sbjct: 317 DRGMLETYLLTSYSARKLSLPNTGHAGGIYNWTL----AHTGQGFDELVKGMGTGLIVTE 372
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
+MG G+N +TGDYS+GA G+++ENG++Q+ VEEITI+G L++MF+ I A+ D R+S
Sbjct: 373 VMGQGVNMVTGDYSRGAAGFYVENGEVQFPVEEITIAGNLKDMFRGIQAVSKDFDLRSSI 432
Query: 445 TSGSILIENMIIAG 458
+G IL+ M +AG
Sbjct: 433 RTGGILLSEMKVAG 446
>gi|254361926|ref|ZP_04978058.1| U62 family microcin-processing peptidase 1 [Mannheimia haemolytica
PHL213]
gi|452744615|ref|ZP_21944458.1| antibiotic maturation factor PmbA [Mannheimia haemolytica serotype
6 str. H23]
gi|153093469|gb|EDN74454.1| U62 family microcin-processing peptidase 1 [Mannheimia haemolytica
PHL213]
gi|452087391|gb|EME03771.1| antibiotic maturation factor PmbA [Mannheimia haemolytica serotype
6 str. H23]
Length = 449
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/455 (37%), Positives = 281/455 (61%), Gaps = 8/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
I ++ + + E +Q + LN+AK+ GA + + + G SV R +++ IE NND
Sbjct: 3 ITDKQTLLQQEQELRQAVEFALNFAKQAGA-EAEVGVTKVAGLSVSSRLEQVENIEFNND 61
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
++ + +Y+ GK+ GN+STSD +S+ T+ AA IA++T+ D GL D+ L
Sbjct: 62 GSLGISVYL--GKRK--GNASTSDLQPESIQKTVEAALAIAKYTSEDACTGLADKELLAF 117
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
D +LY +S+D A +A E+ A N + IVN++ + + N+HG +
Sbjct: 118 EAEDLELYHQADISVDQAVELAIEAEHYALNADEKIVNSDGATFNSHSGVRVYGNTHGML 177
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S++ +S S I+ +++RD Y+ + KL P+ +G AA + + RL ++I
Sbjct: 178 QSYLSSRYSLSCSVISAYEDQLERDYEYTIFREFDKLQAPKWVGEQAAIKAVDRLNPQRI 237
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
T + V+F +A L+ A ISG +LYRKS+FL+D LG++I I E PH+L
Sbjct: 238 KTGEMSVIFYNDVATGLVGHLAGAISGGALYRKSSFLLDKLGEQILPEWFAISERPHLLR 297
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
SS+FD+EGV TQ R ++ +G++Q Y +++YS +K+G+K+TG++GG H+ ++ N+
Sbjct: 298 QLASSAFDSEGVITQNREIITDGVLQTYLMTSYSGRKMGLKSTGHAGGIHNWLVKPNR-- 355
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
L +LK+M TGLLVTE++G IN +TG+YS+GA G+W+ENG+IQY V EITI+G+L
Sbjct: 356 -QGGLNTLLKEMGTGLLVTEMLGSAINSVTGEYSRGAAGFWVENGEIQYPVAEITIAGQL 414
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
Q+M+K +VA+G D+ R++ +GSIL+E M+++G+
Sbjct: 415 QDMYKNLVAVGDDIEHRSNIQTGSILLEKMMVSGE 449
>gi|254229277|ref|ZP_04922695.1| TldD/PmbA family [Vibrio sp. Ex25]
gi|262393170|ref|YP_003285024.1| PmbA protein [Vibrio sp. Ex25]
gi|151938201|gb|EDN57041.1| TldD/PmbA family [Vibrio sp. Ex25]
gi|262336764|gb|ACY50559.1| PmbA protein [Vibrio sp. Ex25]
Length = 447
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 168/446 (37%), Positives = 265/446 (59%), Gaps = 10/446 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
++E +Q L A + + + + G SV R G+++ +E N+D + + +Y
Sbjct: 11 RTELEQAVARALKLASA-KSDAAEVAITKSTGLSVSTRMGEVENVEFNSDGALGITVY-- 67
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
+ G++STSD + ++ T+ AA +IA +T+ D FAG + + + L+ P
Sbjct: 68 --RGQRKGSASTSDLSEAAIEQTVIAALDIAHYTSEDPFAGPAAKEYMVQEIPELDLFHP 125
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
D A +A E EA ++NS I ++ + + NSHG ++ Y S+H
Sbjct: 126 DAPDPDYAADVAIAAEKEALSYNSAIKQSDGASYDSHYGVKVYGNSHGLLASYASSRHST 185
Query: 195 SISPIAI-KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLF 253
S I + + EM+RD Y+ L PE +G AA+ TI+RL A+++ T K P++F
Sbjct: 186 SCCVIGVGQNGEMERDYSYTVARHRDDLWTPETVGRKAAENTINRLDAQRLKTGKYPIMF 245
Query: 254 EAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDN 313
A +A L+ ISG +LYRKS+FL+D LGK++ I E PH+L SS FD+
Sbjct: 246 AADVATGLIGHLVMAISGGNLYRKSSFLLDHLGKQVLPEWFNISERPHVLRGLASSPFDS 305
Query: 314 EGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEML 373
EGV TQ R ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S + N ++ML
Sbjct: 306 EGVYTQDREIITDGVLATYLLTSYAARKMKMAPTGHAGGIHNWYVKS----TGQNFEQML 361
Query: 374 KKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVA 433
K++ TGLLVTE+MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MF +IVA
Sbjct: 362 KELGTGLLVTEVMGQGVNVVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFNKIVA 421
Query: 434 IGSDVLTRNSNTSGSILIENMIIAGK 459
+GSDV TR+ +GSIL++ M +AG+
Sbjct: 422 VGSDVETRSQIQTGSILLDAMKVAGE 447
>gi|433658746|ref|YP_007276125.1| PmbA protein [Vibrio parahaemolyticus BB22OP]
gi|432509434|gb|AGB10951.1| PmbA protein [Vibrio parahaemolyticus BB22OP]
Length = 447
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 266/447 (59%), Gaps = 12/447 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
++E +Q L A + + + + G SV R G ++ +E N+D + + +Y
Sbjct: 11 RTELEQAVARALELASA-KSDAAEVAITKSTGLSVSTRMGDVENVEFNSDGALGITVY-- 67
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYT 133
+ G++STSD + ++ T+NAA +IA +T+ D FAG P E ++ P D L+
Sbjct: 68 --RGQRKGSASTSDLSEAAIEQTVNAALDIAHYTSEDPFAGPAPKEFMVKEVP-DLDLFH 124
Query: 134 PWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHI 193
P D A +A E EA +++ I ++ + + NSHG ++ Y S+H
Sbjct: 125 PDSPDPDYAAQVAIAAEKEALSYSDAIKQSDGASYDSHYGVKVYGNSHGLLASYASSRHS 184
Query: 194 ISISPIAI-KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252
S I + K EM+RD Y+ L PE +G AA+ T+SRL A+++ T + P++
Sbjct: 185 TSCCVIGVGKNGEMERDYSYTVARHRDDLWTPETVGRKAAENTVSRLDAQRLKTGQYPIM 244
Query: 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFD 312
F A +A L+ ISG +LYRKS+FL+D LGK++ I E PH+L SS FD
Sbjct: 245 FAADVATGLIGHLVMAISGGNLYRKSSFLLDHLGKQVLPEWFNISERPHVLRGLASSPFD 304
Query: 313 NEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEM 372
+EGV TQ ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S + N ++M
Sbjct: 305 SEGVYTQDCEIITDGVLATYLLTSYAARKMKMDPTGHAGGIHNWYVKS----TGQNFEQM 360
Query: 373 LKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIV 432
LK++ TGLLVTE+MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MF +IV
Sbjct: 361 LKELGTGLLVTEVMGQGVNVVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFTKIV 420
Query: 433 AIGSDVLTRNSNTSGSILIENMIIAGK 459
A+GSD+ TR+ +GSIL++ M +AG+
Sbjct: 421 AVGSDIETRSQIQTGSILLDTMKVAGE 447
>gi|440289343|ref|YP_007342108.1| putative Zn-dependent protease-like protein [Enterobacteriaceae
bacterium strain FGI 57]
gi|440048865|gb|AGB79923.1| putative Zn-dependent protease-like protein [Enterobacteriaceae
bacterium strain FGI 57]
Length = 450
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/423 (37%), Positives = 259/423 (61%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G V R G+++ +E N+D + + +Y Q+ K G++S++D ++
Sbjct: 36 AEVAVSKTTGIGVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPDAIAR 91
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ +++ L + D L+ P ++ D+A A R E +
Sbjct: 92 TVQAALDIARYTSPDPCAGVAEKDLLAFDAPDLDLFHPAEVTPDEAIEYAARAEQASLKA 151
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + Y ++H +S IA +M+RD Y+
Sbjct: 152 DKRITNTEGGSFNSHYGIKVFGNSHGMLQSYCSTRHSLSSCVIAEADGDMERDYAYTIGR 211
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT++RL +K+ST + PV+F +A L I+G S+YR
Sbjct: 212 ALGDLQTPEFVGEECARRTLARLSPRKLSTMQAPVIFANEVATGLFGHLVGAIAGGSVYR 271
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L S+ FD+EGV+T++R ++K+G++ + L+
Sbjct: 272 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGVLMQWLLTN 331
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 332 YSARKLGLKSTGHAGGIHNWRIAGRGL----SFEKLLKEMGTGLVVTELMGQGVSGITGD 387
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L++M++ IV I D+ TR++ GS+L+ M I
Sbjct: 388 YSRGASGFWVENGEIQYPVSEITIAGNLKDMWRNIVTIADDIETRSNIQCGSVLLPEMKI 447
Query: 457 AGK 459
AG+
Sbjct: 448 AGQ 450
>gi|429092813|ref|ZP_19155427.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Cronobacter dublinensis 1210]
gi|426742355|emb|CCJ81540.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Cronobacter dublinensis 1210]
Length = 446
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 161/423 (38%), Positives = 258/423 (60%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D ++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPDAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D +AG+ +++ L + D L+ P + + A A R E +
Sbjct: 88 TVQAALDIARYTSPDPYAGVAEKDLLAFDAPDLDLFHPAEIEPEQAIEYAARAEQASLKA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + Y ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQSYSSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L+ PE +G A+RT+SRL +K+ T K PV+F +A L ISG ++YR
Sbjct: 208 ALGDLESPEWVGEECARRTLSRLSPRKLPTMKAPVIFGREVATGLFGHLVGAISGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+ S+ FD+EGV T +R ++K+G++Q + L+
Sbjct: 268 KSTFLLDSLGKQILPEWLTIEEHPHLRKGLASTPFDSEGVATSRRDIIKDGVLQQWLLTN 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+TG++GG H+ I + +++LK+M TGL+VTELMG G++ ITGD
Sbjct: 328 YSARKLGLKSTGHAGGIHNWRINGRGL----SFEQLLKEMGTGLVVTELMGQGVSGITGD 383
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V EITI+G L+ M++ +V IG D+ TR++ GS+L+ M I
Sbjct: 384 YSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNMVTIGDDIETRSNIQCGSVLLPEMKI 443
Query: 457 AGK 459
AG+
Sbjct: 444 AGE 446
>gi|157373712|ref|YP_001472312.1| C69 family peptidase [Shewanella sediminis HAW-EB3]
gi|157316086|gb|ABV35184.1| peptidase U62, modulator of DNA gyrase [Shewanella sediminis
HAW-EB3]
Length = 446
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 166/433 (38%), Positives = 269/433 (62%), Gaps = 8/433 (1%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YAK++G + + + ++ G SV R +++ +E N D + + ++ +DG K G+SS
Sbjct: 21 LEYAKELGTTAAEVAISKQQGLSVSTRLKEVETVEFNKDGALGITLF-RDGCK---GSSS 76
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD ++ + AA +IA+FT+SD + GL D + + D L+ P +S D+ +
Sbjct: 77 TSDLSPDAIRQAVKAADDIAKFTSSDPYNGLADADLMATEFPDLDLFHPQEISADELTDL 136
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE 205
A R E A + +S I N++ + NSHGF+ GY S++ +S I
Sbjct: 137 AARSEEAALSVDSRITNSDGASANAHTGLKVYGNSHGFLHGYSSSRYSLSCVVIGETDGN 196
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
MQRD Y+ + L PE +G A+++T+SRL ++KI+T + PVL +A L++
Sbjct: 197 MQRDYDYTISRKFGDLLSPEEVGRKASEKTLSRLGSRKIATTELPVLLSPEIATGLISHL 256
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
ISG+SLYRKS+FL+DS+ ++F I E PH+ G+ S+++D+EGV TQ+R +++
Sbjct: 257 VGAISGSSLYRKSSFLLDSIDTQLFPDWFSIEEQPHLKGALASANYDSEGVATQERHIIE 316
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
+GI+ Y L++YSA+KLG+K TG++GG ++ + + + E++K+M TGL+VTE+
Sbjct: 317 SGILSTYLLTSYSARKLGLKNTGHAGGIYNWTL----SHTGQTFDELVKEMGTGLIVTEV 372
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
MG G+N +TGDYS+GA G+++ENG I Y VEEITI+G L++M++ IVA+ D R+S
Sbjct: 373 MGQGVNAVTGDYSRGAAGFYVENGVILYPVEEITIAGNLKDMYQNIVAVSKDRDLRSSIR 432
Query: 446 SGSILIENMIIAG 458
+G IL+ +M IAG
Sbjct: 433 TGGILLSDMKIAG 445
>gi|343507079|ref|ZP_08744528.1| peptidase PmbA [Vibrio ichthyoenteri ATCC 700023]
gi|342800613|gb|EGU36129.1| peptidase PmbA [Vibrio ichthyoenteri ATCC 700023]
Length = 447
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 170/453 (37%), Positives = 270/453 (59%), Gaps = 10/453 (2%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
R + + E + L A + A + + ++ G SV R +++ +E N+D +
Sbjct: 4 REQVAQQRVELEAAVAKALEMAA-VKADAAEVAISKSTGLSVSTRMCEVENVEFNSDGAL 62
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
+ +Y K G++STSD +K++ T+ AA +IA++T+ D +AG + + +
Sbjct: 63 GITVYRGQRK----GSASTSDLSEKAIQQTVLAALDIAQYTSEDPYAGPAAKEFMVQDIP 118
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ P D A +A E +A ++S I ++ + + NSHG ++ Y
Sbjct: 119 DLDLFHPDTPDPDYAAQVAIAAERQALEYSSKIKQSDGASYDSHYGVKVYGNSHGLLASY 178
Query: 188 PFSKHIISISPIAIKGK-EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
S+H S I EM+RD Y+ +L PE +G AA++T+SRL AK+++T
Sbjct: 179 ASSRHSTSCCVIGQGANGEMERDYSYTMARHKDELWTPEQVGQMAAEKTVSRLDAKRLAT 238
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
K PV+F A +A LL ISG +LYRKS+FL+D LGK+I S + E PHIL
Sbjct: 239 GKYPVMFAADVATGLLGHLVMAISGGNLYRKSSFLLDHLGKQILPSWFNVSERPHILRGL 298
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
SS FD+EGV T+ ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S +
Sbjct: 299 ASSPFDSEGVFTKDCEIITDGVLATYLLTSYAARKMKMDPTGHAGGIHNWFVQS----TG 354
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+ ++MLK++ TG LVTE+MG G+N +TGDYS+GA G+W+ENG+IQY V E+TI+G L++
Sbjct: 355 QDYQQMLKELGTGFLVTEVMGQGVNTVTGDYSRGAAGFWVENGEIQYPVSEVTIAGNLKD 414
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
MF+QIVA+GSDV TR+ +GSIL+E+M +AG+
Sbjct: 415 MFQQIVAVGSDVETRSQIQTGSILLESMKVAGE 447
>gi|417321473|ref|ZP_12108011.1| peptidase PmbA [Vibrio parahaemolyticus 10329]
gi|328471413|gb|EGF42308.1| peptidase PmbA [Vibrio parahaemolyticus 10329]
Length = 447
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 168/447 (37%), Positives = 266/447 (59%), Gaps = 12/447 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
++E +Q L A + + + + G SV R G ++ +E N+D + + +Y
Sbjct: 11 RTELEQAVARALELASA-KSDAAEVAITKSTGLSVSTRMGDVENVEFNSDGALGITVY-- 67
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYT 133
+ G++STSD + ++ T+NAA +IA +T+ D FAG P E ++ P D L+
Sbjct: 68 --RGQRKGSASTSDLSEAAIEQTVNAALDIAHYTSEDPFAGPAPKEFMVKEVP-DLDLFH 124
Query: 134 PWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHI 193
P D A +A E EA +++ I ++ + + NSHG ++ Y S+H
Sbjct: 125 PDSPDPDYAAQVAIAAEKEALSYSDAIKQSDGASYDSHYGVKVYGNSHGLLASYASSRHS 184
Query: 194 ISISPIAI-KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252
S I + K EM+RD Y+ L PE +G AA+ T+SRL A+++ T + P++
Sbjct: 185 TSCCVIGVGKNGEMERDYSYTVARHRDDLWTPETVGRKAAENTVSRLDAQRLKTGQYPIM 244
Query: 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFD 312
F A +A L+ ISG +LYRKS+FL+D LGK++ I E PH+L SS FD
Sbjct: 245 FAADVATGLIGHLVMAISGGNLYRKSSFLLDHLGKQVLPEWFNISERPHVLRGLASSPFD 304
Query: 313 NEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEM 372
+EGV TQ R ++ +G++ Y L++Y+A+K+ M T ++GG H+ + S + + ++M
Sbjct: 305 SEGVYTQDREIITDGVLATYLLTSYAARKMKMDPTSHAGGIHNWYVKS----TGQDFEQM 360
Query: 373 LKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIV 432
LK++ TGLLVTE+MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MF +IV
Sbjct: 361 LKELGTGLLVTEVMGQGVNVVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFTKIV 420
Query: 433 AIGSDVLTRNSNTSGSILIENMIIAGK 459
A+GSD+ TR+ +GSIL++ M +AG+
Sbjct: 421 AVGSDIETRSQIQTGSILLDTMKVAGE 447
>gi|269968011|ref|ZP_06182049.1| Protein pmbA [Vibrio alginolyticus 40B]
gi|269827368|gb|EEZ81664.1| Protein pmbA [Vibrio alginolyticus 40B]
Length = 447
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 166/446 (37%), Positives = 265/446 (59%), Gaps = 10/446 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
++E +Q L A + + + + G SV R G+++ +E N+D + + +Y
Sbjct: 11 RTELEQAVARALKLASA-KSDAAEVAITKSTGLSVSTRMGEVENVEFNSDGALGITVY-- 67
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
+ G++STSD + ++ T+ AA +IA +T+ D FAG + + + L+ P
Sbjct: 68 --RGQRKGSASTSDLSEAAIEQTVIAALDIAHYTSEDPFAGPAAKEYMVQEIPELDLFHP 125
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
D A +A E EA ++NS I ++ + + NSHG ++ Y S+H
Sbjct: 126 DAPDPDYAADVAIAAEKEALSYNSAIKQSDGASYDSHYGVKVYGNSHGLLASYASSRHST 185
Query: 195 SISPIAI-KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLF 253
S I + + EM+RD Y+ L PE +G AA+ T++RL A+++ T + P++F
Sbjct: 186 SCCVIGVGQNGEMERDYSYTVARHRDDLWTPETVGRKAAENTVNRLDAQRLKTGQYPIMF 245
Query: 254 EAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDN 313
A +A L+ ISG +LYRKS+FL+D LGK++ I E PH+L SS FD+
Sbjct: 246 AADVATGLIGHLVMAISGGNLYRKSSFLLDHLGKQVLPEWFNISERPHVLRGLASSPFDS 305
Query: 314 EGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEML 373
EGV TQ R V+ +G++ Y L++Y+A+K+ M TG++GG H+ + S + N ++ML
Sbjct: 306 EGVYTQDREVITDGVLATYLLTSYAARKMKMTPTGHAGGIHNWYVKS----TGQNFEQML 361
Query: 374 KKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVA 433
K++ TGLLVTE+MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MF +IVA
Sbjct: 362 KELGTGLLVTEVMGQGVNVVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFTKIVA 421
Query: 434 IGSDVLTRNSNTSGSILIENMIIAGK 459
+GSD+ TR+ +GSIL++ M +AG+
Sbjct: 422 VGSDIETRSQIQTGSILLDTMKVAGE 447
>gi|378578813|ref|ZP_09827488.1| putative peptide antibiotic peptidase [Pantoea stewartii subsp.
stewartii DC283]
gi|377819093|gb|EHU02174.1| putative peptide antibiotic peptidase [Pantoea stewartii subsp.
stewartii DC283]
Length = 446
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 171/442 (38%), Positives = 264/442 (59%), Gaps = 12/442 (2%)
Query: 19 QQLAQDM-LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q +AQ + L A GA + ++ G V R G+++ +E N+D + + +Y Q+ K
Sbjct: 16 QAIAQALELAKASTDGAE---VAVSKTTGIGVSTRYGEVENVEFNSDGALGITVYHQNRK 72
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++S++D ++ T+ AA +IAR+T+ D FAG D L + D LY PW +
Sbjct: 73 ----GSASSTDLSPDAIKRTVQAAIDIARYTSPDPFAGPADAELLAYDAPDLDLYHPWEI 128
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A +A + E A + I N E + + NSHG + Y S+H +S
Sbjct: 129 DADYAIQLAAQAEQAALQADKRITNTEGGSFNSHVGIKVFGNSHGMLQSYCSSRHSLSSC 188
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA + M+RD Y+ + L + +G A+RT+SRL +K+ T K PV+F +
Sbjct: 189 VIAEQDGNMERDYAYTIGRAIEDLKSADWVGAECARRTLSRLAPRKLDTMKAPVIFAPEV 248
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L ISG+S+YRKSTFL+D++GK+I + I E PH+L S+ FD+EGV+
Sbjct: 249 ATGLFGHLVGAISGSSVYRKSTFLLDAMGKQILPEWLTIQEQPHLLKGLASTPFDSEGVR 308
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
TQ R ++K+G++Q + +++YSA+KLG+ +TG++GG H+ I + +MLK+M
Sbjct: 309 TQARDIIKDGVLQTWLMTSYSARKLGLTSTGHAGGIHNWRIAGQ----GHSFNDMLKQMG 364
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L +M++ IV +G D
Sbjct: 365 TGLVVTELMGQGVSAITGDYSRGAAGFWVENGEIQYPVSEITIAGNLGDMWRNIVTVGDD 424
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
+ TR++ GS+L+ M IAG+
Sbjct: 425 IETRSNIQCGSVLLPEMYIAGQ 446
>gi|451975503|ref|ZP_21926691.1| TldD/PmbA family [Vibrio alginolyticus E0666]
gi|451930560|gb|EMD78266.1| TldD/PmbA family [Vibrio alginolyticus E0666]
Length = 447
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 167/446 (37%), Positives = 265/446 (59%), Gaps = 10/446 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
++E +Q L A + + + + G SV R G+++ +E N+D + + +Y
Sbjct: 11 RTELEQAVARALKLASA-KSDAAEVAITKSTGLSVSTRMGEVENVEFNSDGALGITVY-- 67
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
+ G++STSD + ++ T+ AA +IA +T+ D FAG + + + L+ P
Sbjct: 68 --RGQRKGSASTSDLSEAAIEQTVIAALDIAHYTSEDPFAGPAAKEYMVQEIPELDLFHP 125
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
D A +A E EA +++S I ++ + + NSHG ++ Y S+H
Sbjct: 126 DAPDPDYAADVAIAAEKEALSYDSAIKQSDGASYDSHYGVKVYGNSHGLLASYASSRHST 185
Query: 195 SISPIAI-KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLF 253
S I + + EM+RD Y+ L PE +G AA+ TI+RL A+++ T K P++F
Sbjct: 186 SCCVIGVGQNGEMERDYSYTVARHRDDLWTPETVGRKAAENTINRLDAQRLKTGKYPIMF 245
Query: 254 EAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDN 313
A +A L+ ISG +LYRKS+FL+D LGK++ I E PH+L SS FD+
Sbjct: 246 AADVATGLIGHLVMAISGGNLYRKSSFLLDHLGKQVLPEWFNISERPHVLRGLASSPFDS 305
Query: 314 EGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEML 373
EGV TQ R ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S + N ++ML
Sbjct: 306 EGVYTQDREIITDGVLATYLLTSYAARKMKMAPTGHAGGIHNWYVKS----TGQNFEQML 361
Query: 374 KKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVA 433
K++ TGLLVTE+MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MF +IVA
Sbjct: 362 KELGTGLLVTEVMGQGVNVVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFNKIVA 421
Query: 434 IGSDVLTRNSNTSGSILIENMIIAGK 459
+GSDV TR+ +GSIL++ M +AG+
Sbjct: 422 VGSDVETRSQIQTGSILLDAMKVAGE 447
>gi|407697406|ref|YP_006822194.1| C69 family peptidase [Alcanivorax dieselolei B5]
gi|407254744|gb|AFT71851.1| Peptidase U62, modulator of DNA gyrase [Alcanivorax dieselolei B5]
Length = 451
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 161/435 (37%), Positives = 263/435 (60%), Gaps = 9/435 (2%)
Query: 25 MLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNS 84
+L A++ GAS++ ++ + G SV VR G+++ +E + D+ ++V +Y K G +
Sbjct: 26 VLEEARRQGASNAEVDLSLSQGLSVDVRLGEVETVEFHRDRGVSVTVYFGHRK----GQA 81
Query: 85 STSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKL 144
STSD ++SL D + AA IAR T D +G+ D L D LY PW L+ D A
Sbjct: 82 STSDDRRESLCDAVRAACAIARHTEEDPHSGIADAGLLAHQVPDLDLYHPWALTTDQAIE 141
Query: 145 IAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK 204
A RCE A + ++ IVN+E ++T S ++L S GF+ G+ + H S + +A
Sbjct: 142 QAQRCEAVARD-DARIVNSEGASLSTGASLYVLGTSAGFLEGFAGTHHSRSCAVVAQDEA 200
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
MQR WY S + L PE +G A +RT++RL A +T + P+LF A +A L+
Sbjct: 201 GMQRQFWYDSGRRAELLASPEQVGEKARERTLARLGADVPATGEFPLLFSAEMASGLIGH 260
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
ISG SLYR+++FL D+LG ++ ++ E P + GS+ FD +G+ T+ + +
Sbjct: 261 LIGAISGGSLYRRASFLCDALGSRVLPEGFRLGERPLMTAGNGSTPFDGDGLPTRDQDFI 320
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
++G ++GY L Y+A++LG+ TGN GG H++I+ + + ++ + +L+++ TG+LVTE
Sbjct: 321 EDGELKGYALGLYAARRLGLSPTGNGGGVHNVIL----SDTGESREALLRRLGTGILVTE 376
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
+MG G+N +TGDYS+GA G+W+ENG IQ ++E TI+G L++MF ++ G+DV R +
Sbjct: 377 VMGQGVNLVTGDYSRGAAGFWVENGVIQRPLQEFTIAGNLKDMFGGVLGSGTDVDRRGNI 436
Query: 445 TSGSILIENMIIAGK 459
GS+L+ M +AG+
Sbjct: 437 HCGSLLLSPMKVAGR 451
>gi|365539233|ref|ZP_09364408.1| peptidase PmbA [Vibrio ordalii ATCC 33509]
Length = 447
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 180/452 (39%), Positives = 271/452 (59%), Gaps = 20/452 (4%)
Query: 19 QQLAQDMLNYAKKIG---------ASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNV 69
QQ+AQ + + + + + + G SV R +++ +E N+D + +
Sbjct: 5 QQVAQQRIELEAAVAKALEMAALSSDAAEVAITKSTGLSVSTRMCEVENVEFNSDGALGI 64
Query: 70 IIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDF 129
+Y K G++STSD +K++ T+ AA +IA +T+ D +AG + + N D
Sbjct: 65 TVYRGQRK----GSASTSDLSEKAIAQTVAAALDIALYTSEDPYAGPAPKELMVRNIPDL 120
Query: 130 KLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPF 189
L+ P + D A IA E +A +++ I ++ + + NSHG ++ Y
Sbjct: 121 DLFHPDEPNPDMAAKIAIAAEEKALAYSNKIKQSDGASYDSHYGVKVYGNSHGLLASYAS 180
Query: 190 SKHIISISPIAIKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTR 247
S+H IS I +GK EM+RD Y+ L PE++G AA++TISRL AKK+ T
Sbjct: 181 SRHSISCCVIG-EGKNGEMERDYSYTVARHRDDLWSPELVGQQAAEKTISRLDAKKLKTG 239
Query: 248 KCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFG 307
K PV+F A +A L+ ISG SLYRKS+FL+D LG+KI I E PH+L +
Sbjct: 240 KVPVMFAADVATGLIGHLVMAISGGSLYRKSSFLLDKLGEKILPDWFNIAEKPHVLRALA 299
Query: 308 SSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD 367
SS FD+EGV TQ R ++ +G++ Y LS+Y+A+K+ M TG++GG H+ + S +
Sbjct: 300 SSPFDSEGVFTQDRQIITDGVLSTYLLSSYAARKMKMTPTGHAGGIHNWYVQS----TGQ 355
Query: 368 NLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNM 427
N ++MLK + TGLLVTE+MG G+N +TGDYS+GA G+W+ENG IQY V EITI+G L++M
Sbjct: 356 NFEQMLKALGTGLLVTEVMGQGVNAVTGDYSRGAAGFWVENGVIQYPVSEITIAGNLKDM 415
Query: 428 FKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
F+Q+VA+GSDV TR+ +GSIL+E+M IAG+
Sbjct: 416 FQQMVAVGSDVETRSQIQTGSILLESMKIAGE 447
>gi|145639328|ref|ZP_01794934.1| anaerobic ribonucleotide reductase-activating protein [Haemophilus
influenzae PittII]
gi|145271631|gb|EDK11542.1| anaerobic ribonucleotide reductase-activating protein [Haemophilus
influenzae PittII]
gi|309751202|gb|ADO81186.1| Protease PmbA [Haemophilus influenzae R2866]
Length = 451
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 172/444 (38%), Positives = 270/444 (60%), Gaps = 8/444 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + A K GAS + + + +G SV R +I+ +E ND + + +Y+
Sbjct: 15 EQELRQAVSFAVELATKAGAS-AEVAVTKVSGLSVSARLQEIENVEFTNDGALGISVYMG 73
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K GN+STSD + ++ + + AA IA++T+ D+ GL D++ + N D +LY
Sbjct: 74 QQK----GNASTSDLSESAIKNAVEAALAIAKYTSPDDCTGLADKDLMAFNAPDLELYHA 129
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+ +D A +A + E A + IVN+ + + NSHG + Y S++ +
Sbjct: 130 ADVDVDKATELALQAEQAALQADKRIVNSNGASFNSHTGVKVYGNSHGMLQSYLSSRYSL 189
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S I ++ D Y+ + + KL P +G AK+ +SRL +K+STR+ PV+F
Sbjct: 190 SCSVIGGVEDALENDYEYTISREFDKLQSPIWVGENCAKKVVSRLNPQKLSTREVPVIFL 249
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L++ FA ISG SLYRKS+FL+D LGK++ I E PH+L S+ FD+E
Sbjct: 250 NDVATGLISHFAAAISGGSLYRKSSFLLDHLGKQVLPDWFNISERPHLLRRLASTPFDSE 309
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+TQ R +V+NGI+Q Y +++YS KKLGM TG++GG H+ ++ N T L +L+
Sbjct: 310 GVRTQDREIVENGILQTYLVTSYSGKKLGMPITGHAGGIHNWLVKPNLTG---GLTALLR 366
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+LQ+M K ++A+
Sbjct: 367 QMGTGLLVTDVMGQGVNIVTGDYSRGASGFWVENGEIQYPVAEITIAGQLQDMLKNMLAV 426
Query: 435 GSDVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GSIL++ M I+G
Sbjct: 427 ADDIEHRSNIQTGSILLDKMKISG 450
>gi|387769663|ref|ZP_10125868.1| protein PmbA [Pasteurella bettyae CCUG 2042]
gi|386906437|gb|EIJ71167.1| protein PmbA [Pasteurella bettyae CCUG 2042]
Length = 451
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 171/458 (37%), Positives = 281/458 (61%), Gaps = 8/458 (1%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIE 60
ME L + + E + ++ AKK GA+ + + + NG SV R +++ +E
Sbjct: 1 MENLENQTALLKQQEQELRDAVCYAVDIAKKAGAT-AEVSVTKVNGLSVSTRLKEVENVE 59
Query: 61 QNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDEN 120
NND + + +Y+ K GN+STSD + ++ + ++AA IA++T+ D+ GL D
Sbjct: 60 FNNDGALGISVYLGQQK----GNASTSDLSQAAIKNAVDAALAIAKYTSPDDCTGLADRE 115
Query: 121 TLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANS 180
+ D LY +++D +A + E A N++ IVN+ + + NS
Sbjct: 116 LIAFEAPDLALYKAADINVDKGIELALQAEIAALNYDKRIVNSNGASFNSHNGVRVYGNS 175
Query: 181 HGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLK 240
+G + Y S++ +S S ++ ++++ D Y+ + D +L+ P +G AAK+ I+RL+
Sbjct: 176 YGMLQSYLSSRYSLSCSVLSGIDEQLENDYEYTISRDFNQLENPTWVGENAAKKAIARLQ 235
Query: 241 AKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDP 300
KIST++ PV+F +A L+ A ISG SLYRK++FL+D LGK+I QI E P
Sbjct: 236 PHKISTQESPVIFLNDVATGLIGSLAGAISGGSLYRKASFLLDYLGKQILPDWFQISERP 295
Query: 301 HILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIIS 360
H+ G S+ FD+EGV+T+ R +++ GI++ Y L++YS +KLGM++TG++GG H+ ++
Sbjct: 296 HLKGGLASTPFDSEGVRTEAREIIEQGILRTYLLTSYSGRKLGMQSTGHAGGIHNWLVRP 355
Query: 361 NKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITI 420
NKT L+ +L++M GLLVT+LMG G+N +TGDYS+GA G+W+ENG+IQY V EITI
Sbjct: 356 NKTGG---LESLLREMGHGLLVTDLMGQGVNMVTGDYSRGASGFWVENGEIQYPVAEITI 412
Query: 421 SGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+G+L++M IVA+ D+ R++ +GSIL+E+M I+G
Sbjct: 413 AGQLKDMLHDIVAVSDDIEHRSNIQTGSILLESMKISG 450
>gi|91225592|ref|ZP_01260666.1| PmbA protein [Vibrio alginolyticus 12G01]
gi|91189712|gb|EAS75986.1| PmbA protein [Vibrio alginolyticus 12G01]
Length = 447
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 165/446 (36%), Positives = 266/446 (59%), Gaps = 10/446 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
++E +Q L A + + + + G SV R G+++ +E N+D + + +Y
Sbjct: 11 RTELEQAVARALKLASA-KSDAAEVAITKSTGLSVSTRMGEVENVEFNSDGALGITVY-- 67
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
+ G++STSD + ++ T+ AA +IA +T+ D FAG + + + + L+ P
Sbjct: 68 --RGQRKGSASTSDLSEAAIEQTVIAALDIAHYTSEDPFAGPAAKEYMVQDIPELDLFHP 125
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
D A +A E EA ++NS I ++ + + NSHG ++ Y S+H
Sbjct: 126 DAPDPDYAANVAIAAEKEALSYNSAIKQSDGASYDSHYGVKVYGNSHGLLASYASSRHST 185
Query: 195 SISPIAI-KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLF 253
S I + + EM+RD Y+ L PE +G AA+ T++RL A+++ T + P++F
Sbjct: 186 SCCVIGVGQNGEMERDYSYTVARHRDDLWTPETVGRKAAENTVNRLDAQRLKTGQYPIMF 245
Query: 254 EAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDN 313
A +A L+ ISG +LYRKS+FL+D LGK++ I E PH+L SS FD+
Sbjct: 246 AADVATGLIGHLVMAISGGNLYRKSSFLLDHLGKQVLPEWFNISERPHVLRGLASSPFDS 305
Query: 314 EGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEML 373
EGV TQ R ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S + N ++ML
Sbjct: 306 EGVYTQDREIITDGVLATYLLTSYAARKMKMTPTGHAGGIHNWYVKS----TGQNFEQML 361
Query: 374 KKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVA 433
K++ TGLLVTE+MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L++MF +IVA
Sbjct: 362 KELGTGLLVTEVMGQGVNVVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMFTKIVA 421
Query: 434 IGSDVLTRNSNTSGSILIENMIIAGK 459
+GSD+ TR+ +GSIL++ M +AG+
Sbjct: 422 VGSDIETRSQIQTGSILLDTMKVAGE 447
>gi|321443826|gb|EFX60207.1| hypothetical protein DAPPUDRAFT_344726 [Daphnia pulex]
Length = 254
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 145/253 (57%), Positives = 193/253 (76%)
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
MQRD WY+S ++ PE +G YAA+R +SRL A+KI+T +CPVLFE+P+A LL F
Sbjct: 1 MQRDAWYTSMRSADEMASPEAVGRYAAERALSRLGARKIATTECPVLFESPVAAGLLGGF 60
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
+ +SG +LYRKS+FL+DSLGKK+F HI I EDPH+L GSS FD+EGV++ KR VVK
Sbjct: 61 VQAVSGGALYRKSSFLLDSLGKKVFPKHIDIEEDPHLLRGKGSSPFDDEGVRSVKRKVVK 120
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
G ++GYFLS+YSA+KLGMKTTGNSGG+H+L + S T+S+D+L ML+K+ TGL V EL
Sbjct: 121 GGRVEGYFLSSYSARKLGMKTTGNSGGSHNLTLTSRLTQSTDDLDAMLQKLGTGLFVIEL 180
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
MG G+NY+TGDYS+GA G+W+ENG+I Y V EITI+G L++M I A+G+D + T
Sbjct: 181 MGQGVNYVTGDYSRGASGFWVENGQIAYPVHEITIAGNLKDMLMGIEAVGADTYNMGAKT 240
Query: 446 SGSILIENMIIAG 458
+GSIL+ M +AG
Sbjct: 241 TGSILVNRMKLAG 253
>gi|37678625|ref|NP_933234.1| peptidase PmbA [Vibrio vulnificus YJ016]
gi|37197365|dbj|BAC93205.1| pmbA protein [Vibrio vulnificus YJ016]
Length = 447
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 170/426 (39%), Positives = 262/426 (61%), Gaps = 13/426 (3%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + N+ G SV R +++ +E N+D + + +Y + G++STSD +K++
Sbjct: 32 AEVAINKTTGLSVSTRMCEVENVEFNSDGALGITVY----RGQRKGSASTSDLSEKAIEQ 87
Query: 97 TINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFN 155
T+ AA +IA++T+ D AG P E ++ P D L+ P D A +A E A N
Sbjct: 88 TVLAALDIAQYTSEDPCAGPAPAELMVKEIP-DLDLFHPDTPDPDYAAKMAIAAEEHALN 146
Query: 156 FNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK--EMQRDNWYS 213
++ I ++ + + NSHG ++ Y S+H IS I +GK EM+RD Y+
Sbjct: 147 YSDKIKQSDGASYDSHYGVRVYGNSHGLLASYASSRHSISCCVIG-EGKNGEMERDYSYT 205
Query: 214 SNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNS 273
+ +PE +G AA++TI RL A+K+ T K PV+F A +A L+ ISG +
Sbjct: 206 VARHRDDMWRPEQVGREAAQKTIERLDARKLKTGKYPVMFAADVATGLIGHLVMAISGGN 265
Query: 274 LYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYF 333
LYRKS+FL+D LGK++ I E PHIL SS FD+EGV TQ R ++ +G++ Y
Sbjct: 266 LYRKSSFLLDHLGKQVLPEWFNISERPHILRGLASSPFDSEGVYTQDREIITDGVLATYL 325
Query: 334 LSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYI 393
L++Y+A+K+ M TG++GG H+ + S + + ++MLK++ TGLLVTE+MG G+N +
Sbjct: 326 LTSYAARKMNMAPTGHAGGIHNWFVQS----TGQDFQQMLKELGTGLLVTEVMGQGVNVV 381
Query: 394 TGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIEN 453
TGDYS+GA G+W+ENG++Q+ V EITI+G L+ MF+QIVA+GSDV TR+ +GSIL+ +
Sbjct: 382 TGDYSRGAAGFWVENGELQFPVSEITIAGNLKEMFQQIVAVGSDVETRSQVQTGSILLPS 441
Query: 454 MIIAGK 459
M IAG+
Sbjct: 442 MKIAGE 447
>gi|417362315|ref|ZP_12135994.1| TldE/PmbA protein [Salmonella enterica subsp. enterica serovar Give
str. S5-487]
gi|417522276|ref|ZP_12183779.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Salmonella enterica subsp. enterica serovar Uganda str.
R8-3404]
gi|353581699|gb|EHC42560.1| TldE/PmbA protein [Salmonella enterica subsp. enterica serovar Give
str. S5-487]
gi|353639292|gb|EHC84609.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Salmonella enterica subsp. enterica serovar Uganda str.
R8-3404]
Length = 381
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 156/378 (41%), Positives = 239/378 (63%), Gaps = 4/378 (1%)
Query: 82 GNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDD 141
G++S++D +++ T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+
Sbjct: 8 GSASSTDLSPQAIARTVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDE 67
Query: 142 AKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAI 201
A +A R E + + I N E + + NSHG + GY ++H +S IA
Sbjct: 68 AIELAARAEQASLKADKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAE 127
Query: 202 KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFEL 261
+ +M+RD Y+ L PE +G A+RT+SRL +K+ST K PV+F +A L
Sbjct: 128 ENGDMERDYAYTIGRAMADLQAPEWVGAECARRTLSRLSPRKLSTMKAPVIFANEVATGL 187
Query: 262 LNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKR 321
I+G ++YRKSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R
Sbjct: 188 FGHLVGAIAGGAVYRKSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERR 247
Query: 322 LVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLL 381
+VK+G++ + L+ YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+
Sbjct: 248 DIVKDGVLTQWLLTNYSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLV 303
Query: 382 VTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTR 441
VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR
Sbjct: 304 VTELMGQGVSGITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETR 363
Query: 442 NSNTSGSILIENMIIAGK 459
++ GS+L+ M IAG+
Sbjct: 364 SNIQCGSVLLPEMKIAGQ 381
>gi|146291701|ref|YP_001182125.1| C69 family peptidase [Shewanella putrefaciens CN-32]
gi|145563391|gb|ABP74326.1| peptidase U62, modulator of DNA gyrase [Shewanella putrefaciens
CN-32]
Length = 447
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 165/434 (38%), Positives = 265/434 (61%), Gaps = 9/434 (2%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YA K+G + + + ++ G SV R +++ +E N D + + +Y +DG K G+SS
Sbjct: 21 LEYANKLGTNAAEVAISKQQGLSVSTRLKEVETVEFNKDGALGITVY-RDGCK---GSSS 76
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ + AA +IAR+T+ D F+GL D+ + D KLY P +S ++ +
Sbjct: 77 TSDLSPEAIALAVKAADDIARYTSPDPFSGLADKALMAHQIRDLKLYYPEDISPEELAKL 136
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK- 204
A R E A + + I N++ + + NSHGF++GY S++ +S S I +
Sbjct: 137 AIRAETAALDADPRINNSDGASANAHTAVKVYGNSHGFLNGYCSSRYSLSCSVIGEDSEG 196
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
MQRD Y+ ++ PE +G A++T+SRL A+KI+T + P+L +A L+
Sbjct: 197 NMQRDYDYTIARKFSEMLAPETVGLKTAEKTVSRLGARKIATTRLPILLAPEIATGLIGH 256
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
ISG SLYRKS+FL+D++ +IF I E PH+LG+ S+++D+EGV TQ R ++
Sbjct: 257 LIGAISGGSLYRKSSFLLDAIHTQIFPDWFSIEEQPHLLGALASANYDSEGVATQDRRII 316
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
G+++ Y L++YSA+KLG+ TG++GG ++ + + +++K M TGL+VTE
Sbjct: 317 DRGMLETYLLTSYSARKLGLPNTGHAGGIYNWTL----GHTGQTFDQLVKDMGTGLIVTE 372
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
+MG G+N +TGDYS+GA G+++ENG+IQY VEEITI+G L+ MF+ + A+ D R+S
Sbjct: 373 VMGQGVNMVTGDYSRGAAGFYVENGEIQYPVEEITIAGNLKEMFRGVQAVSKDFDLRSSI 432
Query: 445 TSGSILIENMIIAG 458
+G IL+ M IAG
Sbjct: 433 RTGGILLSEMKIAG 446
>gi|386312308|ref|YP_006008473.1| peptidase U62 modulator of DNA gyrase [Shewanella putrefaciens 200]
gi|319424933|gb|ADV53007.1| peptidase U62 modulator of DNA gyrase [Shewanella putrefaciens 200]
Length = 447
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 165/434 (38%), Positives = 265/434 (61%), Gaps = 9/434 (2%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YA K+G + + + ++ G SV R +++ +E N D + + +Y +DG K G+SS
Sbjct: 21 LEYANKLGTNAAEVAISKQQGLSVCTRLKEVETVEFNKDGALGITVY-RDGCK---GSSS 76
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ + AA +IAR+T+ D F+GL D+ + D KLY P +S ++ +
Sbjct: 77 TSDLSPEAIALAVKAADDIARYTSPDPFSGLADKALMANQIRDLKLYYPEDISPEELAKL 136
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK- 204
A R E A + + I N++ + + NSHGF++GY S++ +S S I +
Sbjct: 137 AIRAETAALDADPRINNSDGASANAHTAVKVYGNSHGFLNGYCSSRYSLSCSVIGEDSEG 196
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
MQRD Y+ ++ PE +G A++T+SRL A+KI+T + P+L +A L+
Sbjct: 197 NMQRDYDYTIARKFSEMLAPETVGLKTAEKTVSRLGARKIATTRLPILLAPEIATGLIGH 256
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
ISG SLYRKS+FL+D++ +IF I E PH+LG+ S+++D+EGV TQ R ++
Sbjct: 257 LIGAISGGSLYRKSSFLLDAIHTQIFPDWFSIEEQPHLLGALASANYDSEGVATQDRRII 316
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
G+++ Y L++YSA+KLG+ TG++GG ++ + + +++K M TGL+VTE
Sbjct: 317 DRGMLETYLLTSYSARKLGLPNTGHAGGIYNWTL----GHTGQTFDQLVKDMGTGLIVTE 372
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
+MG G+N +TGDYS+GA G+++ENG+IQY VEEITI+G L+ MF+ + A+ D R+S
Sbjct: 373 VMGQGVNMVTGDYSRGAAGFYVENGEIQYPVEEITIAGNLKEMFRGVQAVSKDFDLRSSI 432
Query: 445 TSGSILIENMIIAG 458
+G IL+ M IAG
Sbjct: 433 RTGGILLSEMKIAG 446
>gi|336123237|ref|YP_004565285.1| Microcin-processing peptidase 1 [Vibrio anguillarum 775]
gi|335340960|gb|AEH32243.1| Microcin-processing peptidase 1 (PmbA) [Vibrio anguillarum 775]
Length = 447
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 179/452 (39%), Positives = 270/452 (59%), Gaps = 20/452 (4%)
Query: 19 QQLAQDMLNYAKKIG---------ASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNV 69
QQ+AQ + + + + + + G SV R +++ +E N+D + +
Sbjct: 5 QQVAQQRIELEAAVAKALEMAALSSDAAEVAITKSTGLSVSTRMCEVENVEFNSDGALGI 64
Query: 70 IIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDF 129
+Y + G++STSD +K++ T+ AA +IA +T+ D +AG + + N D
Sbjct: 65 TVY----RGQRKGSASTSDLSEKAIAQTVAAALDIALYTSEDPYAGPAPKELMVRNIPDL 120
Query: 130 KLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPF 189
L+ P + D A IA E +A +++ I ++ + + NSHG ++ Y
Sbjct: 121 DLFHPDEPNPDMAAKIAIAAEEKALAYSNKIKQSDGASYDSHYGVKVYGNSHGLLASYAS 180
Query: 190 SKHIISISPIAIKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTR 247
S+H IS I +GK EM+RD Y+ L PE++G AA++TISRL AKK+ T
Sbjct: 181 SRHSISCCVIG-EGKNGEMERDYSYTVARHRDDLWSPELVGQQAAEKTISRLDAKKLKTG 239
Query: 248 KCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFG 307
K PV+F A +A L+ ISG SLYRKS+FL+D LG+KI I E PH+L
Sbjct: 240 KVPVMFAADVATGLIGHLVMAISGGSLYRKSSFLLDKLGEKILPDWFNIAEKPHVLRGLA 299
Query: 308 SSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD 367
SS FD+EGV TQ R ++ +G++ Y LS+Y+A+K+ M TG++GG H+ + S +
Sbjct: 300 SSPFDSEGVFTQDRQIITDGVLSTYLLSSYAARKMKMTPTGHAGGIHNWYVQS----TGQ 355
Query: 368 NLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNM 427
N ++MLK + TGLLVTE+MG G+N +TGDYS+GA G+W+ENG IQY V EITI+G L++M
Sbjct: 356 NFEQMLKALGTGLLVTEVMGQGVNAVTGDYSRGAAGFWVENGVIQYPVSEITIAGNLKDM 415
Query: 428 FKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
F+Q+VA+GSDV TR+ +GSIL+E+M IAG+
Sbjct: 416 FQQMVAVGSDVETRSQIQTGSILLESMKIAGE 447
>gi|167856137|ref|ZP_02478877.1| antibiotic maturation factor [Haemophilus parasuis 29755]
gi|167852733|gb|EDS24007.1| antibiotic maturation factor [Haemophilus parasuis 29755]
Length = 449
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 172/442 (38%), Positives = 275/442 (62%), Gaps = 8/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+Q + L+ A+K GA+ + + + G SV R + + IE NND ++ + +Y+ GK
Sbjct: 16 LRQAVEIALDLAQKAGAT-AEVGVTKVAGLSVSTRLEQTENIEFNNDGSLGISVYL--GK 72
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ GN+STSD KS+ + +A IA++T+ D+ AGL D+ + D LY +
Sbjct: 73 RK--GNASTSDLQPKSIQQAVESALAIAKYTSEDDCAGLADKEMMAYQAPDLALYHQADI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
++D A +A E+ A + + IVN+E + + N+HG + Y S++ +S S
Sbjct: 131 TVDQAVELAIEAEHYALHSDDRIVNSEGATFNSHAGIRVYGNTHGMLQSYLSSRYSLSCS 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
I+ +++RD Y+ + +L P+ +G AA + + RL +K++T + PV+F +
Sbjct: 191 VISAYEDQLERDYEYTISRQFDQLASPKWVGQQAAVKAVDRLNPQKLATCEVPVIFYNDI 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ A ISG +LYRK++FL D LG++I + +I E PH+L SS FD+EGV
Sbjct: 251 ATGLIGHLAGAISGGALYRKASFLQDKLGEQILPTWFEINEKPHLLRQLASSPFDSEGVY 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T+ ++K+G +Q Y L+TYSAKKLGM+TTG++GG H+ ++ N+T L +LK+M
Sbjct: 311 TRDHQIIKDGALQTYLLTTYSAKKLGMQTTGHAGGIHNWLVKPNRT---GGLTALLKEMG 367
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGLLVTE++G IN +TG+YS+GA G+W+ENG+IQY V EITI+G+LQ MFK IVA+G D
Sbjct: 368 TGLLVTEMLGSAINGVTGEYSRGAAGFWVENGEIQYPVAEITIAGQLQEMFKNIVAVGDD 427
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
+ R++ +GSIL+E + ++G+
Sbjct: 428 IEHRSNIQTGSILLEKLKVSGE 449
>gi|27364155|ref|NP_759683.1| peptidase PmbA [Vibrio vulnificus CMCP6]
gi|320157540|ref|YP_004189919.1| tldE/PmbA protein [Vibrio vulnificus MO6-24/O]
gi|27360273|gb|AAO09210.1| PmbA protein [Vibrio vulnificus CMCP6]
gi|319932852|gb|ADV87716.1| tldE/PmbA protein part of proposed TldE/TldD proteolytic complex
[Vibrio vulnificus MO6-24/O]
Length = 447
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 170/426 (39%), Positives = 262/426 (61%), Gaps = 13/426 (3%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + N+ G SV R +++ +E N+D + + +Y + G++STSD +K++
Sbjct: 32 AEVAINKTTGLSVSTRMCEVENVEFNSDGALGITVY----RGQRKGSASTSDLSEKAIEQ 87
Query: 97 TINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFN 155
T+ AA +IA++T+ D AG P E ++ P D L+ P D A +A E A N
Sbjct: 88 TVLAALDIAQYTSEDPCAGPAPAELMVKEIP-DLDLFHPDTPDPDYAAKMAIAAEEHALN 146
Query: 156 FNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK--EMQRDNWYS 213
++ I ++ + + NSHG ++ Y S+H IS I +GK EM+RD Y+
Sbjct: 147 YSDKIKQSDGASYDSHYGVRVYGNSHGLLASYASSRHSISCCVIG-EGKNGEMERDYSYT 205
Query: 214 SNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNS 273
+ +PE +G AA++TI RL A+K+ T K PV+F A +A L+ ISG +
Sbjct: 206 VARHRDDMWRPEQVGREAAQKTIERLDARKLKTGKYPVMFAADVATGLIGHLVMAISGGN 265
Query: 274 LYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYF 333
LYRKS+FL+D LGK++ I E PHIL SS FD+EGV TQ R ++ +G++ Y
Sbjct: 266 LYRKSSFLLDHLGKQVLPEWFNISERPHILRGLASSPFDSEGVYTQDREIITDGVLATYL 325
Query: 334 LSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYI 393
L++Y+A+K+ M TG++GG H+ + S + + ++MLK++ TGLLVTE+MG G+N +
Sbjct: 326 LTSYAARKMNMAPTGHAGGIHNWFVQS----TGQDFQQMLKELGTGLLVTEVMGQGVNVV 381
Query: 394 TGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIEN 453
TGDYS+GA G+W+ENG++Q+ V EITI+G L+ MF+QIVA+GSDV TR+ +GSIL+ +
Sbjct: 382 TGDYSRGAAGFWVENGELQFPVSEITIAGNLKEMFQQIVAVGSDVETRSQIQTGSILLPS 441
Query: 454 MIIAGK 459
M IAG+
Sbjct: 442 MKIAGE 447
>gi|359300043|ref|ZP_09185882.1| antibiotic maturation factor [Haemophilus [parainfluenzae] CCUG
13788]
gi|402305614|ref|ZP_10824673.1| protein PmbA [Haemophilus sputorum HK 2154]
gi|400376727|gb|EJP29614.1| protein PmbA [Haemophilus sputorum HK 2154]
Length = 449
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 169/455 (37%), Positives = 275/455 (60%), Gaps = 8/455 (1%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
I ++ + E ++ + L AKK GA + + + +G SV R + IE NND
Sbjct: 3 ITTKAALQAQELELREAVEFALQIAKKAGA-EAEVGVTKVSGLSVSTRLMNTENIEFNND 61
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
++ + +Y+ K GN+STSD KS+ + +A IA++T+ D AGL D++ +
Sbjct: 62 GSLGISVYLGQRK----GNASTSDLQPKSIQQAVESALGIAKYTSEDECAGLADKDLMAF 117
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
+ D LY +S+D+A +A E A N + IVN+E + + N+HG +
Sbjct: 118 DAPDLDLYHEAQISVDEAVEMAKTAEESALNVSERIVNSEGATFNSHSGVRVYGNTHGML 177
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S++ +S S IA ++++RD Y+ + + L P +G AA + RL +KI
Sbjct: 178 QSYLSSRYSLSCSVIAAYEEQLERDYEYTVSRELDALSSPIWVGQQAAIKAEDRLNPQKI 237
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
+T + PV+F +A L+ A ISG +LYRKS+FL+D LG ++ S +I E PH+
Sbjct: 238 ATCEVPVIFYNEVATGLIGHLAGAISGGALYRKSSFLLDKLGTQVLPSWFEISERPHLRK 297
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
SS+FD+EGV+TQ R ++ +GI+Q Y +++YS +K+G+ +TG++GG H+ ++ N+
Sbjct: 298 QLASSAFDSEGVRTQDREIITDGILQTYLMTSYSGRKMGLPSTGHAGGIHNWLVKPNR-- 355
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
S L +L +M TGLLVTE +G IN +TG+YS+GA G+W+ENG++QY V EITI+G+L
Sbjct: 356 -SGGLNTLLAEMGTGLLVTEFLGSAINPVTGEYSRGAAGFWVENGEVQYPVAEITIAGQL 414
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
Q M++QI+A+G D+ R++ +GSIL+E M ++G+
Sbjct: 415 QEMYQQIIAVGDDIEHRSNIQTGSILLEKMKVSGQ 449
>gi|120600367|ref|YP_964941.1| C69 family peptidase [Shewanella sp. W3-18-1]
gi|120560460|gb|ABM26387.1| microcin-processing peptidase 1. Unknown type peptidase. MEROPS
family U62 [Shewanella sp. W3-18-1]
Length = 447
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/434 (38%), Positives = 265/434 (61%), Gaps = 9/434 (2%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YA K+G + + + ++ G SV R +++ +E N D + + +Y +DG K G+SS
Sbjct: 21 LEYANKLGTNAAEVAISKQQGLSVSTRLKEVETVEFNKDGALGITVY-RDGCK---GSSS 76
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ + AA +IAR+T+ D F+GL D+ + D KLY P +S ++ +
Sbjct: 77 TSDLSPEAIALAVKAADDIARYTSPDPFSGLADKALMANQIRDLKLYYPEDISPEELAKL 136
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK- 204
A R E A + + I N++ + + NSHGF++GY S++ +S S I +
Sbjct: 137 AIRAETAALDADPRINNSDGASANAHTAVKVYGNSHGFLNGYCSSRYSLSCSVIGEDSEG 196
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
MQRD Y+ ++ PE +G A++T+SRL A+KI+T + P+L +A L+
Sbjct: 197 NMQRDYDYTIARKFSEMLAPETVGLKTAEKTVSRLGARKIATTRLPILLAPEIATGLIGH 256
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
ISG SLYRKS+FL+D++ +IF I E PH+LG+ S+++D+EGV TQ R ++
Sbjct: 257 LIGAISGGSLYRKSSFLLDAIHTQIFPDWFSIEEQPHLLGALASANYDSEGVATQDRRII 316
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
G+++ Y L++YSA+KLG+ TG++GG ++ + + +++K M TGL+VTE
Sbjct: 317 DRGMLETYLLTSYSARKLGLPNTGHAGGIYNWTL----GHTGQTFDQLVKDMGTGLIVTE 372
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
+MG G+N +TGDYS+GA G+++ENG+IQY VEEITI+G L+ MF+ + A+ D R+S
Sbjct: 373 VMGQGVNMVTGDYSRGAAGFYVENGEIQYPVEEITIAGNLKEMFRGVQAVSKDFDLRSSI 432
Query: 445 TSGSILIENMIIAG 458
+G IL+ M IAG
Sbjct: 433 RTGGILLSEMKIAG 446
>gi|271498856|ref|YP_003331881.1| peptidase U62 modulator of DNA gyrase [Dickeya dadantii Ech586]
gi|270342411|gb|ACZ75176.1| peptidase U62 modulator of DNA gyrase [Dickeya dadantii Ech586]
Length = 446
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 168/441 (38%), Positives = 260/441 (58%), Gaps = 9/441 (2%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+Q L A+ G+ + + + G SV R G+++ +E N+D + + +Y Q K
Sbjct: 14 LEQAVSQALELARA-GSDAAEVAVTKTTGISVSSRYGEVENVEFNSDGALGITVYYQQRK 72
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++S++D ++ T+ AA +IAR+T+ D FAG D+ L + D L+ P L
Sbjct: 73 ----GSASSTDMSPDAIARTVQAALDIARYTSVDPFAGPADKELLAFDAPDLDLFHPAEL 128
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D +A E A + I N E + + NSHG + Y S+H +S+S
Sbjct: 129 DADRGIELAAAAEQAALKADKRITNTEGGSFNSHYGIKVFGNSHGMLQSYCSSRHSMSVS 188
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +M+RD Y+ L P +G A+RT++RL +K++T + PV+F A +
Sbjct: 189 VIAEHNGDMERDYAYTIGRALGDLQSPSWVGEECARRTLARLSPRKLATMQAPVMFAAEV 248
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L ISG ++YRKSTFL+DSLGK+I + I E PH+ S+ FD+EGV+
Sbjct: 249 ATGLFGHLVGAISGGNVYRKSTFLLDSLGKQILPEWLTIRELPHLRKGLASTPFDSEGVR 308
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T++R +VK+G++Q + L+TY+ +KLGMK+TG++GG H+ I + MLK+M
Sbjct: 309 TEQREIVKDGVLQTWLLTTYAGRKLGMKSTGHAGGIHNWHIAGRGL----DFDGMLKEMG 364
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGLLVT LMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L++M + +V +G D
Sbjct: 365 TGLLVTSLMGQGVSAVTGDYSRGASGFWVENGEIQYPVSEITIAGNLKDMLRNMVTMGDD 424
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ TR++ GS+L+ +M IAG
Sbjct: 425 IETRSNIQCGSVLLPSMKIAG 445
>gi|219870591|ref|YP_002474966.1| antibiotic maturation factor PmbA [Haemophilus parasuis SH0165]
gi|219690795|gb|ACL32018.1| antibiotic maturation factor PmbA [Haemophilus parasuis SH0165]
Length = 449
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 172/442 (38%), Positives = 275/442 (62%), Gaps = 8/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+Q + L+ A+K GA+ + + + G SV R + + IE NND ++ + +Y+ GK
Sbjct: 16 LRQAVEIALDLAQKAGAT-AEVGVTKVAGLSVSTRLEQTENIEFNNDGSLGISVYL--GK 72
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ GN+STSD KS+ + +A IA++T+ D+ AGL D+ + D LY +
Sbjct: 73 RK--GNASTSDLQPKSIQQAVESALAIAKYTSEDDCAGLADKKMMAYQAPDLALYHQADI 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
++D A +A E+ A + + IVN+E + + N+HG + Y S++ +S S
Sbjct: 131 TVDQAVELAIEAEHYALHSDDRIVNSEGATFNSHAGIRVYGNTHGMLQSYLSSRYSLSCS 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
I+ +++RD Y+ + +L P+ +G AA + + RL +K++T + PV+F +
Sbjct: 191 VISAYEDQLERDYEYTISRQFDQLASPKWVGQQAAVKAVDRLNLQKLATCEVPVIFYNDI 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ A ISG +LYRK++FL D LG++I + +I E PH+L SS FD+EGV
Sbjct: 251 ATGLIGHLAGAISGGALYRKASFLQDKLGEQILPTWFEINEKPHLLRQLASSPFDSEGVY 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T+ ++K+G +Q Y L+TYSAKKLGM+TTG++GG H+ ++ N+T L +LK+M
Sbjct: 311 TRDHQIIKDGALQTYLLTTYSAKKLGMQTTGHAGGIHNWLVKPNRT---GGLTALLKEMG 367
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGLLVTE++G IN +TG+YS+GA G+W+ENG+IQY V EITI+G+LQ MFK IVA+G D
Sbjct: 368 TGLLVTEMLGSAINGVTGEYSRGAAGFWVENGEIQYPVAEITIAGQLQEMFKNIVAVGDD 427
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
+ R++ +GSIL+E + ++G+
Sbjct: 428 IEHRSNIQTGSILLEKLKVSGE 449
>gi|378822160|ref|ZP_09844981.1| protein PmbA [Sutterella parvirubra YIT 11816]
gi|378599022|gb|EHY32089.1| protein PmbA [Sutterella parvirubra YIT 11816]
Length = 451
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 168/427 (39%), Positives = 261/427 (61%)
Query: 32 IGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCK 91
+GA ++ E + G +V VR+G+ + +E +++ M V ++ + M G +STSD +
Sbjct: 24 LGADQAAAEVSADRGLAVAVREGETESVEYTDERVMTVSVWCRAAGGMRRGAASTSDLSE 83
Query: 92 KSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCEN 151
++ T+ AA IAR A D AGLPDE TL+ + D L+ P+ + +A R E
Sbjct: 84 AAMERTVRAAVEIARCAAPDPAAGLPDEETLQTDFRDLDLWHPFEGGVAGGVELARRAEA 143
Query: 152 EAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNW 211
AF+ + IV E T + F LANS GF +GY +++H +S+SPIA M+R++
Sbjct: 144 AAFDADHRIVTTEGARFQTSEGGFTLANSWGFSAGYRYARHELSLSPIAEDASGMEREDD 203
Query: 212 YSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISG 271
++ + L PE +G AA R +RL A+ ++ VLFEA A LL+I L+SG
Sbjct: 204 WTEARRVEDLLSPERLGARAAARAAARLGAQSLANGDVRVLFEARTATGLLDILEELLSG 263
Query: 272 NSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQG 331
+LYRK++ L+ G IF H+ + EDP++ S GS FDNEG +RLVV+ G + G
Sbjct: 264 RALYRKASCLLGREGNLIFPRHVNVEEDPYLPASIGSGLFDNEGCAGTRRLVVEEGRLAG 323
Query: 332 YFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGIN 391
FL++YSA++LG +TTGN+GGA++L + S +T++SD ML ++ TGLLVTE+ G G+N
Sbjct: 324 AFLTSYSARRLGRRTTGNAGGAYNLRLTSAETRASDTFDVMLARLGTGLLVTEVFGHGVN 383
Query: 392 YITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILI 451
+TGDYS+GA G+W+ENG++ Y V +T++G L +M + A+G+D + +GS+L+
Sbjct: 384 PVTGDYSRGASGFWVENGRLAYPVAGVTLAGNLLDMMASVEAVGADEHPEGARRTGSLLL 443
Query: 452 ENMIIAG 458
M +AG
Sbjct: 444 PKMTVAG 450
>gi|378697376|ref|YP_005179334.1| peptidase [Haemophilus influenzae 10810]
gi|301169892|emb|CBW29496.1| predicted peptidase required for the maturation and secretion of
the antibiotic peptide MccB17 [Haemophilus influenzae
10810]
Length = 451
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/444 (38%), Positives = 271/444 (61%), Gaps = 8/444 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + A K GAS + + + +G SV R +I+ +E ND + + +Y+
Sbjct: 15 EQELRQAVSFAVELATKAGAS-AEVAVTKVSGLSVSARLQEIENVEFTNDGALGISVYMG 73
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K GN+STSD + ++ + + AA IA++T+ D+ GL D++ + + D +LY
Sbjct: 74 QQK----GNASTSDLSESAIKNAVEAALAIAKYTSPDDCTGLADKDLMAFDAPDLELYHA 129
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+ +D A +A + E A + IVN+ + + NSHG + Y S++ +
Sbjct: 130 ADVDVDKATELALQAEQAALQADKRIVNSNGASFNSHTGVKVYGNSHGMLQSYLSSRYSL 189
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S I ++ D Y+ + + KL P +G AK+ +SRL +K+STR+ PV+F
Sbjct: 190 SCSVIGGVEDALENDYEYTISREFDKLQSPIWVGENCAKKVVSRLNPQKLSTREVPVIFL 249
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L++ FA ISG SLYRKS+FL+D LGK++ I E PH+L S+ FD+E
Sbjct: 250 NDVATGLISHFAAAISGGSLYRKSSFLLDYLGKQVLPDWFNISERPHLLRRLASTPFDSE 309
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+TQ R +V+NGI+Q Y +++YS KKLGM +TG++GG H+ ++ N T L +L+
Sbjct: 310 GVRTQDREIVENGILQTYLVTSYSGKKLGMPSTGHAGGIHNWLVKPNLTG---GLTALLR 366
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+LQ+M K ++A+
Sbjct: 367 QMGTGLLVTDVMGQGVNIVTGDYSRGASGFWVENGEIQYPVAEITIAGQLQDMLKNMLAV 426
Query: 435 GSDVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GSIL++ M I+G
Sbjct: 427 ADDIEHRSNIQTGSILLDKMKISG 450
>gi|221134072|ref|ZP_03560377.1| pmbA protein [Glaciecola sp. HTCC2999]
Length = 443
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/442 (37%), Positives = 259/442 (58%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
+ +++ D+L AK GA+ + ++ G +V R +++ IE ND + + +Y+
Sbjct: 9 DIKEVVSDVLAMAKAQGATEAEASMSKVQGIAVSARMQEVENIEFTNDGGLGISVYVGRH 68
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++ST+D K +L T+ A IA+ T D+ G+ D N + D LY P
Sbjct: 69 K----GSASTADLSKAALSLTVQKAIEIAKHTGEDDCNGIADANKIATYIPDCDLYHPIE 124
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
L + A E A +++S I N++ + NSHG ++GYP +++ +S
Sbjct: 125 LDTEQGLRDALAAEKAALDYDSKITNSDGASYNANIGCRVYGNSHGLIAGYPSTRYSLSC 184
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
++ +MQRD Y + ++ P++IG AAK I RL A+KI+T K PV+F+
Sbjct: 185 VVLSESETDMQRDYAYEVSRVSSEIGAPDVIGREAAKHAIERLDARKINTGKYPVVFDKT 244
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
+A L F ISG SL+RKS++L+DSL ++ S + I E PH+ + SS FDNEGV
Sbjct: 245 IASSLFGHFVGAISGGSLFRKSSYLMDSLHTQVLPSWLTIDEKPHVKRALASSPFDNEGV 304
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
+T +V G++Q Y L++YSA+K+G++T G++GG H+ I +N + +L++M
Sbjct: 305 QTNDMQIVTEGVLQHYLLTSYSARKMGLETNGHAGGIHNWYISTNAPDQA----ALLQQM 360
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
TGLLVTELMG G+N +TGDYS+GA G+W+ENG IQY V EITI+G L++M I A+ +
Sbjct: 361 GTGLLVTELMGQGVNGVTGDYSRGAAGFWVENGVIQYPVHEITIAGNLKSMLMNIEAVAN 420
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R S +GS+LI M IAG
Sbjct: 421 DIEVRGSIQTGSVLISEMQIAG 442
>gi|145630252|ref|ZP_01786034.1| PmbA [Haemophilus influenzae R3021]
gi|144984533|gb|EDJ91956.1| PmbA [Haemophilus influenzae R3021]
Length = 451
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/447 (38%), Positives = 275/447 (61%), Gaps = 11/447 (2%)
Query: 15 KSEFQQLAQDM---LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVII 71
K++ Q+L Q + + A K GAS + + + +G SV R +I+ +E ND + + +
Sbjct: 12 KAQEQELRQAVSFAVALATKAGAS-AEVAVTKVSGLSVSARLQEIENVEFTNDGALGISV 70
Query: 72 YIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKL 131
Y+ K GN+STSD + ++ + + AA IA++T+ D+ GL D++ + + D +L
Sbjct: 71 YMGQQK----GNASTSDLSESAIKNAVEAALAIAKYTSPDDCTGLADKDLMAFDAPDLEL 126
Query: 132 YTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSK 191
Y + +D A +A + E A + I+N+ + + NSHG + Y S+
Sbjct: 127 YHAADVDVDKATELALQAEKAALEADERIINSNGASFNSHTGVKVYGNSHGMLQSYLSSR 186
Query: 192 HIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPV 251
+ +S S I ++ D Y+ + + KL P +G AK+ +SRL +K+STR+ PV
Sbjct: 187 YSLSCSVIGGVEDALENDYEYTISREFDKLQSPIWVGENCAKKVVSRLNPQKLSTREVPV 246
Query: 252 LFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSF 311
+F +A L++ FA ISG SLYRKS+FL+D LGK++ I E PH+L S+ F
Sbjct: 247 IFLNDVATGLISHFAAAISGGSLYRKSSFLLDHLGKQVLPDWFNISERPHLLRRLASTPF 306
Query: 312 DNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKE 371
D+EGV+TQ R +V+NGI+Q Y +++YS KKLGM +TG++GG H+ ++ N T L
Sbjct: 307 DSEGVRTQDREIVENGILQTYLVTSYSGKKLGMSSTGHAGGIHNWLVKPNLTG---GLTA 363
Query: 372 MLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQI 431
+L++M TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+LQ+M K +
Sbjct: 364 LLRQMGTGLLVTDVMGQGVNIVTGDYSRGASGFWVENGEIQYPVAEITIAGQLQDMLKNM 423
Query: 432 VAIGSDVLTRNSNTSGSILIENMIIAG 458
+A+ D+ R++ +GSIL++ M I+G
Sbjct: 424 LAVADDIEHRSNIQTGSILLDKMKISG 450
>gi|197287445|ref|YP_002153317.1| peptidase PmbA [Proteus mirabilis HI4320]
gi|227358293|ref|ZP_03842634.1| peptidase PmbA [Proteus mirabilis ATCC 29906]
gi|194684932|emb|CAR47112.1| putative modulator of DNA gyrase [Proteus mirabilis HI4320]
gi|227161629|gb|EEI46666.1| peptidase PmbA [Proteus mirabilis ATCC 29906]
Length = 451
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 170/446 (38%), Positives = 272/446 (60%), Gaps = 12/446 (2%)
Query: 17 EFQQLAQDMLNYAKKIGASH---SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYI 73
+ +QL ++ ++ A +I A + + N+ G SV R G+++ +E N+D + + +Y
Sbjct: 15 QVKQL-EEAVSLALEIAAKQCDGAEVAINKSTGISVSTRYGEVENVEFNSDGALGITVYQ 73
Query: 74 QDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYT 133
Q K G++S++D ++ + AA +IAR+T+ D +AG D+ L + LY
Sbjct: 74 QQRK----GSASSTDLSPDAIKRAVQAAVDIARYTSVDPYAGPADKALLAFDAPFLDLYH 129
Query: 134 PWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHI 193
P ++ D A +A R E A + +S IVN E + + NS G + Y S++
Sbjct: 130 PTDITADKAIELASRAEQAALDSDSRIVNTEGGSFNSHSGTRVFGNSLGLLKSYSSSRYS 189
Query: 194 ISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLF 253
+S IA +G++M+RD Y+ + + L PE +G A+RT+SRL +K+ST K PVLF
Sbjct: 190 MSSCVIAREGEDMERDYAYTISRRFEALQSPEWVGQECARRTLSRLAPRKLSTMKAPVLF 249
Query: 254 EAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDN 313
A +A + ISG+ +YR+S+ L+DSLGK+IF + I E PHI+G S+ FD+
Sbjct: 250 SAEVATGIFGHLVAAISGSMIYRESSCLLDSLGKQIFPQWLNIQERPHIVGGLASTPFDS 309
Query: 314 EGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEML 373
EGV+T ++K+G++Q + L++YSA+KLG+K+ G++GG H+ I + E+L
Sbjct: 310 EGVRTSDADIIKDGVLQEWLLTSYSARKLGLKSNGHAGGIHNWRIPGQGL----SFDELL 365
Query: 374 KKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVA 433
K+M TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V E+TI+G L+ M+ I
Sbjct: 366 KEMGTGLVVTELMGQGVSTVTGDYSRGASGFWVENGEIQYPVSEVTIAGNLKEMWANIAT 425
Query: 434 IGSDVLTRNSNTSGSILIENMIIAGK 459
IG D+ TR++ GS+L+ M IAG+
Sbjct: 426 IGDDIETRSNIQCGSLLLPEMSIAGQ 451
>gi|254244714|ref|ZP_04938036.1| PmbA protein [Pseudomonas aeruginosa 2192]
gi|126198092|gb|EAZ62155.1| PmbA protein [Pseudomonas aeruginosa 2192]
Length = 450
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/446 (38%), Positives = 268/446 (60%), Gaps = 13/446 (2%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
+ ++ + ++ A++ GAS + + G S VR+G+++ +E N D+ + +Y
Sbjct: 15 DLREQVEQIIAEARRQGASACEVAVSLEQGLSTSVRQGEVETVEFNRDQGFGITLYAGQR 74
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS + ++ +T+ AA IAR T+ D AGL D + + LY PW
Sbjct: 75 K----GSASTSATGEAAIRETVAAALAIARHTSEDECAGLADAALMARELPELDLYHPWS 130
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG---YPFSKHI 193
LS + A A CE AF + + + T + T Q + NSHGF+ G +P +
Sbjct: 131 LSPEQAVERALACEAAAFAADKRVTKADGTTLNTHQGCRVYGNSHGFIGGLRQHPAQPQL 190
Query: 194 ISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLF 253
P A KG +MQRD WY N + L E IG AA+R SRL A+ + T + PVLF
Sbjct: 191 RDDPPRA-KG-QMQRDYWYDVNRPGQGLATAESIGRRAAERAASRLSARPVQTAEVPVLF 248
Query: 254 EAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDN 313
+A L F ISG SLYRKS+FL +LG+++F + I E PH++G+ GS+SFD+
Sbjct: 249 APEIAVGLFGHFLGAISGGSLYRKSSFLEGALGQRLFPEWLSIDERPHLVGALGSASFDS 308
Query: 314 EGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEML 373
+G+ T + V+NG + Y L TYS +KLG+ +T N+GG H+L + + ++ ++
Sbjct: 309 DGLATYAKPFVENGELVSYVLGTYSGRKLGLPSTANAGGVHNLFV----SHGDEDQAALI 364
Query: 374 KKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVA 433
++M GLLVTELMG G+N +TGDYS+GA GYW+ENGKIQ+ V+E+TI+ L+++F++IVA
Sbjct: 365 RRMGRGLLVTELMGQGVNLVTGDYSRGAAGYWVENGKIQFPVQEVTIAANLRDLFRRIVA 424
Query: 434 IGSDVLTRNSNTSGSILIENMIIAGK 459
+G D+ R + +GS+L+E+M++AG+
Sbjct: 425 VGKDIERRGNLHTGSVLVESMMVAGR 450
>gi|406595215|ref|YP_006746345.1| pmbA protein [Alteromonas macleodii ATCC 27126]
gi|406372536|gb|AFS35791.1| pmbA protein [Alteromonas macleodii ATCC 27126]
Length = 443
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/443 (38%), Positives = 255/443 (57%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
++ Q + D+L A GA+ + ++ G +V R +++ +E ND + + +Y+
Sbjct: 8 ADIQNVVDDVLKLALSKGATQAEASMSKVQGIAVSSRMQEVENVEFTNDGGLGISVYV-- 65
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
GK+ G++ST+D +L + A +IAR+T+ D GL D + + D LY P
Sbjct: 66 GKRK--GSASTADLSIAALTLAVEKAVDIARYTSEDPCTGLADADLIATEFPDLDLYHPE 123
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L + A A E A N++S I N++ + N+HG +GYP S++ +S
Sbjct: 124 ELDTEKAIKTAIEAETAAMNYDSRITNSDGASYNANLGMRVYGNTHGINAGYPSSRYSLS 183
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD Y+ + L +G AAK T+ RL A+KI+T PVL
Sbjct: 184 CMVIGAQDNDMQRDYAYTVSRKASLLQSASAVGIDAAKATVDRLGARKINTANVPVLLHR 243
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L + ISG SLYR+S+FL+DSLGK++F + I E P I G SSSFDNEG
Sbjct: 244 DIASSLFGHYVGAISGGSLYRRSSFLLDSLGKQVFPEWLNIEERPFIKGGLASSSFDNEG 303
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V +V G + Y +TYS++KL ++ G++GG H+ ++ T SD ++LK+
Sbjct: 304 VACSDMTIVDAGKLATYLYTTYSSRKLNTRSNGHAGGIHNWLV--GDTGHSD--ADLLKE 359
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGL VTELMG G+N +TGDYS+GA GYW+ENG IQY V E+TI+G L++MFK IVAIG
Sbjct: 360 MGTGLFVTELMGQGVNGVTGDYSRGAAGYWVENGIIQYPVHEVTIAGNLKDMFKGIVAIG 419
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
++ R S +GS+LI+ M IAG
Sbjct: 420 AEKDVRGSVQTGSVLIDQMKIAG 442
>gi|261254009|ref|ZP_05946582.1| PmbA protein [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417956116|ref|ZP_12599111.1| peptidase PmbA [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|260937400|gb|EEX93389.1| PmbA protein [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342811321|gb|EGU46366.1| peptidase PmbA [Vibrio orientalis CIP 102891 = ATCC 33934]
Length = 447
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/452 (38%), Positives = 270/452 (59%), Gaps = 20/452 (4%)
Query: 19 QQLAQDMLNY------AKKIGASHS---SIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNV 69
QQ+AQ + A ++ A+ S + ++ G SV R +++ +E N+D + +
Sbjct: 5 QQVAQQRVELESAVAKALEMAAAKSDAAEVAISKSTGLSVSTRMCEVENVEFNSDGALGI 64
Query: 70 IIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAG-LPDENTLEMNPLD 128
+Y K G++STSD +K++ T+ AA +IA++T+ D +AG P E ++ P D
Sbjct: 65 TVYRNQRK----GSASTSDLSEKAIQQTVLAALDIAQYTSEDPYAGPAPKEMMVQEIP-D 119
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
L+ P D A +A E +A +++ I ++ + + NSHG ++ Y
Sbjct: 120 LDLFHPDTPDPDYAAQVAIAAEQQALSYSDKIKQSDGASYDSHYGLKVYGNSHGLLASYA 179
Query: 189 FSKHIISISPIAIKGK-EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTR 247
S+H S I EM+RD Y+ L PE++G AA++T+SRL A+K+ T
Sbjct: 180 SSRHSTSCCVIGQGANGEMERDYSYTVARHKDDLWTPELVGQKAAEKTVSRLDAQKLKTG 239
Query: 248 KCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFG 307
K PV+F A +A LL ISG +LYRKS+FL+D LGK++ + E PH+L
Sbjct: 240 KYPVMFAADVATGLLGHLVMAISGGNLYRKSSFLLDHLGKQVLPEWFNVSERPHVLRGLA 299
Query: 308 SSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD 367
SS FD+EGV TQ R ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S +
Sbjct: 300 SSPFDSEGVFTQDREIITDGVLATYLLTSYAARKMDMTPTGHAGGIHNWFVKS----TGQ 355
Query: 368 NLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNM 427
+ +MLK++ TGLLVTE+MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+ L+ M
Sbjct: 356 DFDQMLKELGTGLLVTEVMGQGVNIVTGDYSRGAAGFWVENGEIQYPVSEITIASNLKEM 415
Query: 428 FKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
F QIVA+G+DV TR+ +GSIL+E+M +AG+
Sbjct: 416 FNQIVAVGNDVETRSQIQTGSILLESMKVAGE 447
>gi|33152434|ref|NP_873787.1| antibiotic maturation factor PmbA [Haemophilus ducreyi 35000HP]
gi|33148657|gb|AAP96176.1| antibiotic maturation factor PmbA [Haemophilus ducreyi 35000HP]
Length = 449
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 171/434 (39%), Positives = 270/434 (62%), Gaps = 8/434 (1%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
LN A+K GAS + + + G S+ R K + IE NND ++ + +Y+ K GN+S
Sbjct: 24 LNVAQKAGAS-AEVSVTKVAGLSISTRLEKTENIEFNNDGSLGISVYLNQRK----GNAS 78
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +S+ + +A IA++T+ D AGL D+ + +P+D +LY +S++ A +
Sbjct: 79 TSDLQPQSIQRAVESALAIAKYTSEDKCAGLADKALMAFDPIDLELYHQANISVEQAVEL 138
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE 205
A E+ A + ++ IVN+E + + N+HG ++ Y S++ +S S IA ++
Sbjct: 139 ALETEHYALHTDNRIVNSEGATFNSHSGIRVYGNTHGMLTSYLSSRYSLSCSVIAEHSEQ 198
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
++RD Y+ + + KL P +G AA + + RL +KI T + PV+F +A L+
Sbjct: 199 LERDYEYTISREFDKLQSPIWVGQQAAFKAVKRLNPRKIKTCEVPVIFYNDVATGLIGHL 258
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
A ISG +LYRKS+FL+D LGK+I I E PH+L SSSFD+EGV+TQ R ++
Sbjct: 259 AGAISGGALYRKSSFLLDHLGKQILPEWFAISERPHLLRQLASSSFDSEGVRTQDREIIT 318
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
G++Q Y +++YSA K+G+ TTG++GG H+ ++ N T L +LK+++ GLLVTE
Sbjct: 319 AGVLQTYLMTSYSACKMGLTTTGHAGGIHNWLVKPNCT---GGLSGLLKQIDCGLLVTEF 375
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
+G IN +TG+YS+GA G+WIENG+IQY V EITI+G+LQ M++ I+A+ DV R++
Sbjct: 376 LGSAINSVTGEYSRGASGFWIENGEIQYPVAEITIAGQLQEMYQDIIAVADDVEYRSNIQ 435
Query: 446 SGSILIENMIIAGK 459
+GSIL+ M I+G+
Sbjct: 436 TGSILVNKMKISGE 449
>gi|425069292|ref|ZP_18472407.1| protein pmbA [Proteus mirabilis WGLW6]
gi|404597703|gb|EKA98198.1| protein pmbA [Proteus mirabilis WGLW6]
Length = 442
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 170/446 (38%), Positives = 272/446 (60%), Gaps = 12/446 (2%)
Query: 17 EFQQLAQDMLNYAKKIGASH---SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYI 73
+ +QL ++ ++ A +I A + + N+ G SV R G+++ +E N+D + + +Y
Sbjct: 6 QVKQL-EEAVSLALEIAAKQCDGAEVAINKSTGISVSTRYGEVENVEFNSDGALGITVYQ 64
Query: 74 QDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYT 133
Q K G++S++D ++ + AA +IAR+T+ D +AG D+ L + LY
Sbjct: 65 QQRK----GSASSTDLSPDAIKRAVQAAVDIARYTSVDPYAGPADKALLAFDAPFLDLYH 120
Query: 134 PWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHI 193
P ++ D A +A R E A + +S IVN E + + NS G + Y S++
Sbjct: 121 PTDITADKAIELASRAEQAALDSDSRIVNTEGGSFNSHSGTRVFGNSLGLLKSYSSSRYS 180
Query: 194 ISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLF 253
+S IA +G++M+RD Y+ + + L PE +G A+RT+SRL +K+ST K PVLF
Sbjct: 181 MSSCVIAREGEDMERDYAYTISRRFEALQSPEWVGQECARRTLSRLAPRKLSTMKAPVLF 240
Query: 254 EAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDN 313
A +A + ISG+ +YR+S+ L+DSLGK+IF + I E PHI+G S+ FD+
Sbjct: 241 SAEVATGIFGHLVAAISGSMIYRESSCLLDSLGKQIFPQWLNIQERPHIVGGLASTPFDS 300
Query: 314 EGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEML 373
EGV+T ++K+G++Q + L++YSA+KLG+K+ G++GG H+ I + E+L
Sbjct: 301 EGVRTSDADIIKDGVLQEWLLTSYSARKLGLKSNGHAGGIHNWRIPGQGL----SFDELL 356
Query: 374 KKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVA 433
K+M TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V E+TI+G L+ M+ I
Sbjct: 357 KEMGTGLVVTELMGQGVSTVTGDYSRGASGFWVENGEIQYPVSEVTIAGNLKEMWANIAT 416
Query: 434 IGSDVLTRNSNTSGSILIENMIIAGK 459
IG D+ TR++ GS+L+ M IAG+
Sbjct: 417 IGDDIETRSNIQCGSLLLPEMSIAGQ 442
>gi|16273077|ref|NP_439310.1| hypothetical protein HI1152 [Haemophilus influenzae Rd KW20]
gi|260580236|ref|ZP_05848066.1| pmbA protein [Haemophilus influenzae RdAW]
gi|1172537|sp|P45077.1|PMBA_HAEIN RecName: Full=Protein PmbA homolog
gi|1574709|gb|AAC22807.1| pmbA protein (pmbA) [Haemophilus influenzae Rd KW20]
gi|260093520|gb|EEW77453.1| pmbA protein [Haemophilus influenzae RdAW]
Length = 451
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 169/444 (38%), Positives = 271/444 (61%), Gaps = 8/444 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + A K GAS + + + +G SV R +I+ +E ND + + +Y+
Sbjct: 15 EQELRQAVSFAVELATKAGAS-AEVAVTKVSGLSVSARLQEIENVEFTNDGALGISVYMG 73
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K GN+STSD + ++ + + AA IA++T+ D+ GL D++ + + D +LY
Sbjct: 74 QQK----GNASTSDLSESAIKNAVEAALAIAKYTSPDDCTGLADKDLMAFDAPDLELYHA 129
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+ +D A +A + E A + I+N+ + + NSHG + Y S++ +
Sbjct: 130 ADIDVDKATELALQAEQAALQADERIINSNGASFNSHTGVKVYGNSHGMLQSYLSSRYSL 189
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S I ++ D Y+ + + KL P +G AK+ +SRL +K+STR+ PV+F
Sbjct: 190 SCSVIGGVEDALENDYEYTISREFDKLQSPIWVGENCAKKVVSRLNPQKLSTREVPVIFL 249
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A +++ FA ISG SLYRKS+FL+D LGK++ I E PH+L S+ FD+E
Sbjct: 250 NDVATGIISHFAAAISGGSLYRKSSFLLDHLGKQVLPDWFSISERPHLLRRLASTPFDSE 309
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+TQ R +V+NGI+Q Y +++YS KKLGM +TG++GG H+ ++ N T L +L+
Sbjct: 310 GVRTQDREIVENGILQTYLVTSYSGKKLGMSSTGHAGGIHNWLVKPNLTG---GLTALLR 366
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+LQ+M K ++A+
Sbjct: 367 QMGTGLLVTDVMGQGVNIVTGDYSRGASGFWVENGEIQYPVAEITIAGQLQDMLKNMLAV 426
Query: 435 GSDVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GSIL++ M I+G
Sbjct: 427 ADDIEHRSNIQTGSILLDKMKISG 450
>gi|167625730|ref|YP_001676024.1| peptidase U62 modulator of DNA gyrase [Shewanella halifaxensis
HAW-EB4]
gi|167355752|gb|ABZ78365.1| peptidase U62 modulator of DNA gyrase [Shewanella halifaxensis
HAW-EB4]
Length = 460
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 171/457 (37%), Positives = 273/457 (59%), Gaps = 14/457 (3%)
Query: 8 RSKFIYSKS---EFQQLAQDM---LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQ 61
+S+F+ S S E L + L YAK +G S + + ++ G SV R +++ +E
Sbjct: 11 KSRFVSSPSIDIELDSLKDAVSMALEYAKTLGTSGAEVAISKQQGLSVSTRMKEVETVEF 70
Query: 62 NNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENT 121
N D + + ++ +DG K G+SSTSD K ++ + AA +IARFT++D F GL +++
Sbjct: 71 NKDGALGITVF-RDGCK---GSSSTSDLSKAAIQQAVKAADDIARFTSADPFNGLAEKSL 126
Query: 122 LEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSH 181
+ D LY P +S ++ +A E A + + + ++ S + NSH
Sbjct: 127 MATEFPDLDLYHPEDISPEELTRLAVLAEEAALDTDPRVQTSDGASANAHSSVKVYGNSH 186
Query: 182 GFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKA 241
GF++GY S++ +S I MQRD Y+ ++ PEIIG AA++T RL
Sbjct: 187 GFLNGYCSSRYSLSCVAIGELEGSMQRDYDYTIARKFSEMTAPEIIGKKAAEKTAGRLGG 246
Query: 242 KKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPH 301
+KI+T + PVLF +A L+ ISG SLYRKS+FL+D++ ++F I EDP
Sbjct: 247 RKIATTQLPVLFSPEIATGLMGHLVGAISGGSLYRKSSFLLDAIDTQVFPDWFSIHEDPL 306
Query: 302 ILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISN 361
++G+ SS++D+EGV TQ R ++ NG + Y L++YSA+KLG+ TG++GG ++ +
Sbjct: 307 LVGALASSAYDSEGVATQARDIIDNGRLATYLLTSYSARKLGLTNTGHAGGIYNWTL--- 363
Query: 362 KTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITIS 421
+ + +++K+M TGL+VTE+MG G+N +TGDYS+GA G+++ENG I Y VEEITI+
Sbjct: 364 -STTGQTFDQLVKEMGTGLIVTEVMGQGVNTVTGDYSRGAAGFYVENGVILYPVEEITIA 422
Query: 422 GKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
G L++M++ IVA+ D R+S +G IL++ M IAG
Sbjct: 423 GNLKDMYQNIVAVAKDRDLRSSIRTGGILMDKMKIAG 459
>gi|307129057|ref|YP_003881073.1| peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Dickeya dadantii 3937]
gi|306526586|gb|ADM96516.1| predicted peptidase required for the maturation and secretion of
the antibiotic peptide MccB17 [Dickeya dadantii 3937]
Length = 462
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 168/441 (38%), Positives = 259/441 (58%), Gaps = 9/441 (2%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+Q L A+ G+ + + + G SV R G+++ +E N+D + + +Y Q K
Sbjct: 30 LEQAVSQALELARA-GSDAAEVAVTKTTGISVSSRYGEVENVEFNSDGALGITVYYQQRK 88
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++S++D ++ T+ AA +IAR+T+ D +G D++ L D L+ P L
Sbjct: 89 ----GSASSTDMSPDAIARTVQAALDIARYTSVDPCSGPADKDLLAFEAPDLDLFHPAEL 144
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D +A E A + I N E + + NSHG + Y S+H +S+S
Sbjct: 145 DADRGIELAAAAEQAALKADKRITNTEGGSFNSHYGIKVFGNSHGMLQSYCSSRHSMSVS 204
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +M+RD Y+ LD P +G A+RT++RL +K++T + PV+F + +
Sbjct: 205 VIAEHNGDMERDYAYTIGRALGDLDSPAWVGEECARRTLARLSPRKLATMEAPVMFSSEV 264
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L ISG S+YRKSTFL+DSLGK+I + I E PH+ S+ FD+EGV+
Sbjct: 265 ATGLFGHLVGAISGGSVYRKSTFLLDSLGKQILPEWLTIQELPHLRKGLASTPFDSEGVR 324
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T++R +VK G++Q + L+TY+ +KLGMK+TG++GG H+ I + MLK+M
Sbjct: 325 TEQRDIVKEGVLQTWLLTTYAGRKLGMKSTGHAGGIHNWRIAGRGL----DFDGMLKEMG 380
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGLLVT LMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L++M + +V IG D
Sbjct: 381 TGLLVTSLMGQGVSAVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMLRNMVTIGDD 440
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ TR++ GS+L+ +M IAG
Sbjct: 441 IETRSNIQCGSVLLPSMKIAG 461
>gi|260772151|ref|ZP_05881068.1| PmbA protein [Vibrio metschnikovii CIP 69.14]
gi|260613018|gb|EEX38220.1| PmbA protein [Vibrio metschnikovii CIP 69.14]
Length = 447
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 168/454 (37%), Positives = 271/454 (59%), Gaps = 12/454 (2%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
R + + ++E + L+ A A + + ++ G SV +++ +E N+D +
Sbjct: 4 RQQVMIQRAELEAAVAKALDMASA-QADAAEVAISKSTGLSVSTHMCEVENVEFNSDGAL 62
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
+ +Y + G++STSD +K+++ T+ AA +IA FT+ D +AG + +
Sbjct: 63 GITVY----RGQRKGSASTSDLSEKAIHQTVLAALDIAHFTSEDPYAGPAPKALMVKQIP 118
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ P + D A IA E EA N++S I ++ + + NSHG ++ Y
Sbjct: 119 DLDLFHPDEPNPDRAASIAIAAEREALNYSSKIKQSDGASYDSHYGVKVYGNSHGLLASY 178
Query: 188 PFSKHIISISPIAIKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
S+H IS S I +GK EM+RD Y+ L P+ +G AA++TI RL A+++
Sbjct: 179 ASSRHSISCSVIG-EGKNGEMERDYSYTVARHRDDLWTPQRVGQQAAEKTIQRLDARQLK 237
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
T + PV+F A +A L+ ISG SLYRKS+FL+D LG++I S I E PH+L
Sbjct: 238 TGQYPVMFAADVATGLMGHLVTAISGGSLYRKSSFLLDHLGQQILPSWFTINERPHLLRG 297
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
S+ FD+EGV T R ++ +G++ Y L++Y+A+K+ M+ TG++GG H+ I S +
Sbjct: 298 LASTPFDSEGVATIDREIITDGVLATYLLTSYAARKMNMQPTGHAGGIHNWFIAS----T 353
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
+ ++LK M GLLVTE+MG G+N +TGDYS+GA G+W+E+G+IQY V +TI+G L+
Sbjct: 354 GQDFAQLLKTMGRGLLVTEVMGQGVNTVTGDYSRGAAGFWVEDGQIQYPVSGVTIAGNLK 413
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
MF+Q++A+G+DV TR+ +GS+LIE+M +AG+
Sbjct: 414 TMFQQLLAVGTDVETRSQIQTGSMLIESMKVAGE 447
>gi|145633118|ref|ZP_01788850.1| anaerobic ribonucleotide reductase-activating protein [Haemophilus
influenzae 3655]
gi|144986344|gb|EDJ92923.1| anaerobic ribonucleotide reductase-activating protein [Haemophilus
influenzae 3655]
Length = 451
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 172/447 (38%), Positives = 275/447 (61%), Gaps = 11/447 (2%)
Query: 15 KSEFQQLAQDM---LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVII 71
K++ Q+L Q + + A K GAS + + + +G SV R +I+ +E ND + + +
Sbjct: 12 KAQEQELRQAVSFAVALATKAGAS-AEVAVTKVSGLSVSARLQEIENVEFTNDGALGISV 70
Query: 72 YIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKL 131
Y+ K GN+STSD + ++ + + AA IA++T+ D+ GL D++ + + D +L
Sbjct: 71 YMGQQK----GNASTSDLSESAIKNAVEAALAIAKYTSPDDCTGLADKDLMAFDAPDLEL 126
Query: 132 YTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSK 191
Y + +D A +A + E A + IVN+ + + NSHG + Y S+
Sbjct: 127 YHSADIDVDKATELALQAEQAALQADKRIVNSNGASFNSHTGVKVYGNSHGMLQSYLSSR 186
Query: 192 HIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPV 251
+ +S S I ++ D Y+ + + KL P +G AK+ +SRL +K+STR+ PV
Sbjct: 187 YSLSCSVIGGVEDALENDYEYTISREFDKLQSPIWVGENCAKKVVSRLNPQKLSTREVPV 246
Query: 252 LFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSF 311
+F +A L++ FA ISG SLYRKS+FL++ LGK++ I E PH+L S+ F
Sbjct: 247 IFLNDVATGLISHFAAAISGGSLYRKSSFLLEHLGKQVLPDWFNISERPHLLRRLASTPF 306
Query: 312 DNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKE 371
D+EGV+TQ R +V+NG++Q Y +++YS KKLGM +TG++GG H+ ++ N T L
Sbjct: 307 DSEGVRTQDREIVENGVLQTYLVTSYSGKKLGMPSTGHAGGIHNWLVKPNLTG---GLTV 363
Query: 372 MLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQI 431
+L++M TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+LQ+M K +
Sbjct: 364 LLRQMETGLLVTDVMGQGVNIVTGDYSRGASGFWVENGEIQYPVAEITIAGQLQDMLKNM 423
Query: 432 VAIGSDVLTRNSNTSGSILIENMIIAG 458
VA+ D+ R++ +GSIL++ M I+G
Sbjct: 424 VAVADDIEHRSNIQTGSILLDKMKISG 450
>gi|375266755|ref|YP_005024198.1| peptidase PmbA [Vibrio sp. EJY3]
gi|369842075|gb|AEX23219.1| peptidase PmbA [Vibrio sp. EJY3]
Length = 447
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 166/446 (37%), Positives = 264/446 (59%), Gaps = 10/446 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
++E +Q L A + + + + G SV R G ++ +E N+D + + +Y
Sbjct: 11 RTELEQAVARALKLAS-TKSDAAEVAITKSTGLSVSTRMGDVENVEFNSDGALGITVY-- 67
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
+ G++STSD + ++ T+ AA +IA +T+ D FAG + + + D L+ P
Sbjct: 68 --RGQRKGSASTSDLSEAAIEQTVIAALDIAHYTSEDPFAGPAAKEYMVDSIPDLDLFHP 125
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
D A +A E EA +++S I ++ + + NSHG ++ Y S+H
Sbjct: 126 DSPDPDYAAEVAIAAEKEALSYDSTIKQSDGASYDSHYGVKVYGNSHGLLASYASSRHST 185
Query: 195 SISPIAI-KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLF 253
S I + K EM+RD Y+ L PE +G AA+ T++RL A+++ T + P++F
Sbjct: 186 SCCVIGVGKNGEMERDYSYTVARHRDDLWTPETVGRKAAENTVNRLDAQRLKTGQYPIMF 245
Query: 254 EAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDN 313
A +A L+ ISG +LYR+S+FL+D LGK+I + E PH+L SS FD+
Sbjct: 246 AADVATGLIGHLVMAISGGNLYRQSSFLLDHLGKQILPEWFNVSERPHVLRGLASSPFDS 305
Query: 314 EGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEML 373
EGV TQ R ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S + N ++ML
Sbjct: 306 EGVYTQDREIITDGVLATYLLTSYAARKMKMDPTGHAGGIHNWYVKS----TGQNFEQML 361
Query: 374 KKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVA 433
K++ TGLLVTE+MG G+N +TGDYS+GA G+W+ENG IQY V EITI+G L++MF +IVA
Sbjct: 362 KELGTGLLVTEVMGQGVNVVTGDYSRGAAGFWVENGVIQYPVSEITIAGNLKDMFNKIVA 421
Query: 434 IGSDVLTRNSNTSGSILIENMIIAGK 459
+GSDV TR+ +GSIL++ M +AG+
Sbjct: 422 VGSDVETRSQIQTGSILLDTMKVAGE 447
>gi|424592229|ref|ZP_18031652.1| protein pmbA [Vibrio cholerae CP1037(10)]
gi|408029729|gb|EKG66433.1| protein pmbA [Vibrio cholerae CP1037(10)]
Length = 447
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 167/428 (39%), Positives = 263/428 (61%), Gaps = 17/428 (3%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + + G SV R +++ +E N+D + + +Y + G++STSD +K++
Sbjct: 32 AEVAITKSTGLSVSTRMCEVENVEFNSDGALGITVY----RGQRKGSASTSDLSEKAIRQ 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IA++T++D +AG + + + D L+ P + D A IA E A +
Sbjct: 88 TVLAALDIAQYTSADPYAGPAPKELMVQDIPDLDLFHPDEPNPDVAAQIAIAAERAALGY 147
Query: 157 NSLIVNNENTGVTTQQSHF---LLANSHGFMSGYPFSKHIISISPIAIKGK--EMQRDNW 211
+ I ++ + SHF + NSHG ++ Y S+H IS S I +G+ EM+RD
Sbjct: 148 SKKIKQSDGG---SYDSHFGIRVYGNSHGLLASYASSRHSISCSVIG-EGRNGEMERDYS 203
Query: 212 YSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISG 271
Y+ L PE +G AA+ T+SRL +K+ T + PV+F A +A L+ ISG
Sbjct: 204 YTVARHRDDLWTPESVGLQAAENTVSRLDPQKLKTGQFPVMFAADVAIGLIGHLVMAISG 263
Query: 272 NSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQG 331
+LYRKS+FL+D LGK I + I E PH++ SS FD+EGV+TQ ++ +G++
Sbjct: 264 GNLYRKSSFLLDHLGKTILPTWFNISERPHVMRGLASSPFDSEGVRTQDLEIITDGVLAT 323
Query: 332 YFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGIN 391
Y L++Y+A+K+ M TG++GG H+ + S + N ++MLK++ TGLLVTE+MG G+N
Sbjct: 324 YLLTSYAARKMNMTPTGHAGGIHNWYVKS----TGQNYQQMLKELGTGLLVTEVMGQGVN 379
Query: 392 YITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILI 451
+TGDYS+GA G+W+ENG+I+Y V EITI+G L+ M +QIVA+GSD+ TR+ +GSILI
Sbjct: 380 VVTGDYSRGAAGFWVENGEIKYPVSEITIAGNLKQMLQQIVAVGSDIETRSQIQTGSILI 439
Query: 452 ENMIIAGK 459
E+M +AG+
Sbjct: 440 ESMKVAGE 447
>gi|410859917|ref|YP_006975151.1| pmbA protein [Alteromonas macleodii AltDE1]
gi|410817179|gb|AFV83796.1| pmbA protein [Alteromonas macleodii AltDE1]
Length = 443
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 171/443 (38%), Positives = 256/443 (57%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
++ Q + D+L A GA+ + ++ G +V R +++ +E ND + + +Y+
Sbjct: 8 ADIQNVVDDVLKLAVSKGATQAEASMSKVQGIAVSSRMQEVENVEFTNDGGLGISVYV-- 65
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
GK+ G++ST+D K +L + A +IAR+T+ D GL D + + D +LY P
Sbjct: 66 GKRK--GSASTADLSKAALTLAVEKAVDIARYTSEDPCTGLADADLIATEFPDLELYHPE 123
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L + A E A +++S I N++ + N+HG +GYP S++ +S
Sbjct: 124 ELDTEKAIKTTIEAEKAAMDYDSRITNSDGASYNANLGMRVYGNTHGINAGYPSSRYSLS 183
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD Y+ + L +G AAK T+ RL A+KI+T PVL
Sbjct: 184 CMVIGAQDDDMQRDYAYTVSRKSALLQSAASVGIDAAKATVDRLGARKINTANVPVLLHR 243
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L + ISG SLYR+S+FL+DSLGK++F + I E P I G SSSFDNEG
Sbjct: 244 DIASSLFGHYVGAISGGSLYRRSSFLLDSLGKQVFPEWLNIEERPLIKGGLASSSFDNEG 303
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V +V G + Y +TYS++KL ++ G++GG H+ ++ T SD ++LK+
Sbjct: 304 VACADMTIVDAGQLATYLYTTYSSRKLNTRSNGHAGGIHNWLV--GDTGHSD--ADLLKE 359
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGL VTELMG G+N +TGDYS+GA GYW+ENG IQY V E+TI+G L++MFK IVAIG
Sbjct: 360 MGTGLFVTELMGQGVNGVTGDYSRGAAGYWVENGIIQYPVHEVTIAGNLKDMFKGIVAIG 419
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
++ R S +GS+LI+ M IAG
Sbjct: 420 AEKDVRGSVQTGSVLIDQMKIAG 442
>gi|429885918|ref|ZP_19367485.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Vibrio cholerae PS15]
gi|429227064|gb|EKY33119.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Vibrio cholerae PS15]
Length = 447
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 170/429 (39%), Positives = 265/429 (61%), Gaps = 19/429 (4%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + + G SV R +++ +E N+D + + +Y + G++STSD +K++
Sbjct: 32 AEVAITKSTGLSVSTRMCEVENVEFNSDGALGITVY----RGQRKGSASTSDLSEKAIRQ 87
Query: 97 TINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFN 155
T+ AA +IA++T++D +AG P E ++ P D L+ P + D A IA E A
Sbjct: 88 TVLAALDIAQYTSADPYAGPAPKELMVQEIP-DLDLFHPDEPNPDVAAQIAIAAERAALG 146
Query: 156 FNSLIVNNENTGVTTQQSHF---LLANSHGFMSGYPFSKHIISISPIAIKGK--EMQRDN 210
++ I ++ + SHF + NSHG ++ Y S+H IS S I +G+ EM+RD
Sbjct: 147 YSKKIKQSDGG---SYDSHFGIRVYGNSHGLLASYASSRHSISCSVIG-EGRNGEMERDY 202
Query: 211 WYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLIS 270
Y+ L PE +G AA+ T+SRL +K+ T + PV+F A +A L+ IS
Sbjct: 203 SYTVARHRDDLWTPESVGLQAAENTVSRLDPQKLKTGQFPVMFAADVATGLIGHLVMAIS 262
Query: 271 GNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQ 330
G +LYRKS+FL+D LGK I + I E PH++ SS FD+EGV+TQ ++ +G++
Sbjct: 263 GGNLYRKSSFLLDHLGKTILPTWFNISERPHVMRGLASSPFDSEGVRTQDLEIITDGVLA 322
Query: 331 GYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGI 390
Y L++Y+A+K+ M TG++GG H+ + S + N ++MLK++ TGLLVTE+MG G+
Sbjct: 323 TYLLTSYAARKMNMTPTGHAGGIHNWTVKS----TGQNYQQMLKELGTGLLVTEVMGQGV 378
Query: 391 NYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSIL 450
N +TGDYS+GA G+W+ENG+I+Y V EITI+G L+ M +QIVA+GSD+ TR+ +GSIL
Sbjct: 379 NVVTGDYSRGAAGFWVENGEIKYPVSEITIAGNLKQMLQQIVAVGSDIETRSQIQTGSIL 438
Query: 451 IENMIIAGK 459
IE+M +AG+
Sbjct: 439 IESMKVAGE 447
>gi|329124120|ref|ZP_08252667.1| peptide maturation protein PmbA [Haemophilus aegyptius ATCC 11116]
gi|327467545|gb|EGF13043.1| peptide maturation protein PmbA [Haemophilus aegyptius ATCC 11116]
Length = 451
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 169/444 (38%), Positives = 272/444 (61%), Gaps = 8/444 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + A K GAS + + + +G SV R +I+ +E ND + + +Y++
Sbjct: 15 EQELRQAVSFAVELATKAGAS-AEVAVTKVSGLSVSARLQEIENVEFTNDGALGISVYME 73
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K GN+STSD + ++ + + AA IA++T+ D+ GL D++ + + D +LY
Sbjct: 74 QQK----GNASTSDLSESAIKNAVEAALAIAKYTSPDDCTGLADKDLMAFDAPDLELYHA 129
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+ +D A +A + E A + IVN+ + + + NSHG + Y S++ +
Sbjct: 130 ADVDVDKATELALQAEQAALQADKRIVNSNGASFNSHKGVKVYGNSHGMLQSYLSSRYSL 189
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S I ++ D Y+ + + KL P +G AK+ +SRL +K+STR+ PV+F
Sbjct: 190 SCSVIGGVEDALENDYEYTISREFDKLQSPIWVGENCAKKVVSRLNPQKLSTREVPVIFL 249
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A +++ FA ISG SLYRKS+FL+D LGK++ I E PH+L S+ FD+E
Sbjct: 250 NDVATGIISHFAAAISGGSLYRKSSFLLDHLGKQVLPDWFSISERPHLLRRLASTPFDSE 309
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+TQ R +V++G++Q Y +++YS KKLGM +TG+SGG H+ ++ N T L +L+
Sbjct: 310 GVRTQDREIVEDGVLQTYLVTSYSGKKLGMPSTGHSGGIHNWLVKPNLTG---GLTALLR 366
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+LQ+M K +VA+
Sbjct: 367 QMGTGLLVTDVMGQGVNIVTGDYSRGASGFWVENGEIQYPVAEITIAGQLQDMLKNMVAV 426
Query: 435 GSDVLTRNSNTSGSILIENMIIAG 458
D+ ++ +GSIL++ M I+G
Sbjct: 427 ADDIEHCSNIQTGSILLDKMKISG 450
>gi|261344910|ref|ZP_05972554.1| PmbA protein [Providencia rustigianii DSM 4541]
gi|282567050|gb|EFB72585.1| PmbA protein [Providencia rustigianii DSM 4541]
Length = 446
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 174/458 (37%), Positives = 272/458 (59%), Gaps = 16/458 (3%)
Query: 2 EQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQ 61
EQ+ + R K ++ L YAK + + N+ G SV R+G+++ +E
Sbjct: 5 EQVTEQRKKL-------EEAVAHALEYAKSR-CDAAEVAVNKSTGISVSTRQGEVENVEF 56
Query: 62 NNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENT 121
N+D + + +Y K G++S++D +++ T+ AA +IA +T+ D +AG +++
Sbjct: 57 NSDGALGITVY----HKQRKGSASSTDLSHEAIERTVQAAIDIACYTSEDPYAGPAEKSL 112
Query: 122 LEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSH 181
L + D L+ LS +DA A E A +S I+N E + NSH
Sbjct: 113 LAFDAPDLNLFQASELSPEDAIKYASIAEMTALKADSRIINTEGGSFNGHYGIRVFGNSH 172
Query: 182 GFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKA 241
G + Y S++ +S IA + +M+RD Y+ L PE +G A+RT+SRL
Sbjct: 173 GLLKSYSSSRYSMSSCVIAEENGQMERDYAYTIGRSIDALKSPEWVGQECARRTLSRLSP 232
Query: 242 KKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPH 301
+K+ T K PV+F + +A L ISG+S+YRKS+FL+DSLGK+I S + I E PH
Sbjct: 233 RKLPTMKAPVIFASEVATGLFGHLVGAISGSSIYRKSSFLLDSLGKQILPSWLTINEQPH 292
Query: 302 ILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISN 361
++G SS FD+EGV+T +R +V+NGI+Q + +++YSA+KLG+++TG++GG H+ I
Sbjct: 293 LMGGLASSPFDSEGVRTTERNIVENGILQTWLMTSYSARKLGLQSTGHAGGIHNWRIAGQ 352
Query: 362 KTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITIS 421
+ +LK+M TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+
Sbjct: 353 GL----SFDALLKQMGTGLVVTELMGQGVSGITGDYSRGASGFWVENGEIQYPVSEITIA 408
Query: 422 GKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
G L++M+ +V I D+ TR++ GS+LI M IAG+
Sbjct: 409 GNLKDMWMNMVTIADDIETRSNIQCGSVLIPEMSIAGE 446
>gi|251791379|ref|YP_003006100.1| peptidase pmbA [Dickeya zeae Ech1591]
gi|247540000|gb|ACT08621.1| peptidase U62 modulator of DNA gyrase [Dickeya zeae Ech1591]
Length = 446
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 166/441 (37%), Positives = 261/441 (59%), Gaps = 9/441 (2%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+Q L A+ G+ + + + G SV R G+++ +E N+D + + +Y Q K
Sbjct: 14 LEQAVSQALELARA-GSDAAEVAVTKTTGISVSSRYGEVENVEFNSDGALGITVYYQQRK 72
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++S++D ++ T+ AA +IAR+T+ D ++G D++ L + D L+ P L
Sbjct: 73 ----GSASSTDMSPDAIARTVQAALDIARYTSVDPYSGPADKDLLAFDAPDLDLFHPAEL 128
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D +A E A + I N E + + NSHG + Y S+H +S+S
Sbjct: 129 DADRGIELAAAAEQAALKADKRITNTEGGSFNSHYGIKVFGNSHGMLQSYCSSRHSMSVS 188
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +M+RD Y+ L P +G A+RT++RL +K++T + PV+F A +
Sbjct: 189 VIAEHNGDMERDYAYTIGRALDDLQAPSWVGEECARRTLARLAPRKLATMEAPVMFAAEV 248
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L ISG+S+YRKSTFL+DSLG++I + I E PH+ S+ FD+EGV+
Sbjct: 249 ATGLFGHLVGAISGSSVYRKSTFLLDSLGQQILPEWLTIQELPHLRKGLASTPFDSEGVR 308
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T +R +VK+G++Q + L+TY+ +KLGMK+TG++GG H+ I + MLK+M
Sbjct: 309 TAQRDIVKDGVLQTWLLTTYAGRKLGMKSTGHAGGIHNWRIAGRGL----DFDGMLKEMG 364
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGLLVT LMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L++M + +V +G D
Sbjct: 365 TGLLVTSLMGQGVSAVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMLRNMVTVGDD 424
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ TR++ GS+L+ +M IAG
Sbjct: 425 IETRSNIQCGSVLLPSMKIAG 445
>gi|425073827|ref|ZP_18476933.1| protein pmbA [Proteus mirabilis WGLW4]
gi|404595098|gb|EKA95653.1| protein pmbA [Proteus mirabilis WGLW4]
Length = 442
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 165/423 (39%), Positives = 260/423 (61%), Gaps = 8/423 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + N+ G SV R G+++ +E N+D + + +Y Q K G++S++D ++
Sbjct: 28 AEVAINKSTGISVSTRYGEVENVEFNSDGALGITVYQQQRK----GSASSTDLSPDAIKR 83
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
+ AA +IAR+T+ D +AG D+ L + LY P ++ D A +A R E A +
Sbjct: 84 AVQAAVDIARYTSVDPYAGPADKALLAFDAPFLDLYHPTDITADKAIELASRAEQAALDS 143
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+S IVN E + + NS G + Y S++ +S IA +G++M+RD Y+ +
Sbjct: 144 DSRIVNTEGGSFNSHSGTRVFGNSLGLLKSYSSSRYSMSSCVIAREGEDMERDYAYTISR 203
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
+ L PE +G A+RT+SRL +K+ST K PVLF A +A + ISG+ +YR
Sbjct: 204 RFEALQSPEWVGQECARRTLSRLAPRKLSTMKAPVLFSAEVATGIFGHLVAAISGSMIYR 263
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
+S+ L+DSLGK+IF + I E PHI+G S+ FD+EGV+T ++K+G++Q + L++
Sbjct: 264 ESSCLLDSLGKQIFPQWLNIQERPHIVGGLASTPFDSEGVRTSDADIIKDGVLQEWLLTS 323
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGD 396
YSA+KLG+K+ G++GG H+ I + E+LK+M TGL+VTELMG G++ +TGD
Sbjct: 324 YSARKLGLKSNGHAGGIHNWRIPGQGL----SFDELLKEMGTGLVVTELMGQGVSTVTGD 379
Query: 397 YSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
YS+GA G+W+ENG+IQY V E+TI+G L+ M+ I IG D+ TR++ GS+L+ M I
Sbjct: 380 YSRGASGFWVENGEIQYPVSEVTIAGNLKEMWANIATIGDDIETRSNIQCGSLLLPEMSI 439
Query: 457 AGK 459
AG+
Sbjct: 440 AGQ 442
>gi|294139088|ref|YP_003555066.1| pmbA protein [Shewanella violacea DSS12]
gi|293325557|dbj|BAJ00288.1| pmbA protein [Shewanella violacea DSS12]
Length = 446
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 167/433 (38%), Positives = 265/433 (61%), Gaps = 8/433 (1%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YAK++G S + + ++ G SV R +++ +E N D + + ++ +DG K G+SS
Sbjct: 21 LEYAKQLGTSGAEVAISKQQGLSVSTRMKEVETVEFNKDGALGITLF-RDGCK---GSSS 76
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ + + AA IARFT+SD + GL + + + D LY P ++ + +
Sbjct: 77 TSDLSPEAIREAVKAADGIARFTSSDPYNGLAEAELMAKDFPDLGLYHPQEVTPAELIEL 136
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE 205
A R E A + +S I N++ + NSHGF++GY S++ +S I
Sbjct: 137 AVRSEEAALDVDSRISNSDGASANAHTGIKVYGNSHGFLNGYCSSRYSLSCVVIGETDGN 196
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
MQRD Y+ + L PE +G A++ T+ RL +KI+T + PVL +A L+
Sbjct: 197 MQRDYDYTISRKFNDLLSPEEVGRKASENTLGRLGGRKIATTELPVLLAPEIATGLMGHL 256
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
ISG+SLYRKS+FL+DS+ KIF I E PH++G S+++D+EGV TQ+R +++
Sbjct: 257 VGAISGSSLYRKSSFLLDSIDTKIFPDWFSIEEQPHMVGGLASANYDSEGVATQERSIIQ 316
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
+G++ Y L++YSA+KLGMK TG++GG ++ + + E++K+M TGL+VTE+
Sbjct: 317 DGVLCTYLLTSYSARKLGMKNTGHAGGIYNWTL----AHTGQTFDELVKEMGTGLIVTEV 372
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
MG G+N +TGDYS+GA G+++ENG I Y VEEITI+G L++M++ IVA+ D R+S
Sbjct: 373 MGQGVNGVTGDYSRGAAGFYVENGVILYPVEEITIAGNLKDMYQNIVAVSKDRDLRSSIR 432
Query: 446 SGSILIENMIIAG 458
+G IL+ +M IAG
Sbjct: 433 TGGILLSSMKIAG 445
>gi|121727450|ref|ZP_01680578.1| pmbA protein [Vibrio cholerae V52]
gi|153215201|ref|ZP_01949882.1| pmbA protein [Vibrio cholerae 1587]
gi|153801096|ref|ZP_01955682.1| pmbA protein [Vibrio cholerae MZO-3]
gi|153825801|ref|ZP_01978468.1| pmbA protein [Vibrio cholerae MZO-2]
gi|153829785|ref|ZP_01982452.1| pmbA protein [Vibrio cholerae 623-39]
gi|229513459|ref|ZP_04402923.1| PmbA protein [Vibrio cholerae TMA 21]
gi|229521600|ref|ZP_04411018.1| PmbA protein [Vibrio cholerae TM 11079-80]
gi|229524518|ref|ZP_04413923.1| PmbA protein [Vibrio cholerae bv. albensis VL426]
gi|254225927|ref|ZP_04919529.1| pmbA protein [Vibrio cholerae V51]
gi|254291451|ref|ZP_04962243.1| pmbA protein [Vibrio cholerae AM-19226]
gi|262191588|ref|ZP_06049768.1| PmbA protein [Vibrio cholerae CT 5369-93]
gi|417825750|ref|ZP_12472337.1| protein pmbA [Vibrio cholerae HE48]
gi|419838222|ref|ZP_14361659.1| protein pmbA [Vibrio cholerae HC-46B1]
gi|421345003|ref|ZP_15795405.1| protein pmbA [Vibrio cholerae HC-43B1]
gi|421352235|ref|ZP_15802599.1| protein pmbA [Vibrio cholerae HE-25]
gi|423736183|ref|ZP_17709372.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-41B1]
gi|424010516|ref|ZP_17753448.1| protein pmbA [Vibrio cholerae HC-44C1]
gi|121630222|gb|EAX62622.1| pmbA protein [Vibrio cholerae V52]
gi|124114846|gb|EAY33666.1| pmbA protein [Vibrio cholerae 1587]
gi|124123329|gb|EAY42072.1| pmbA protein [Vibrio cholerae MZO-3]
gi|125621553|gb|EAZ49885.1| pmbA protein [Vibrio cholerae V51]
gi|148874703|gb|EDL72838.1| pmbA protein [Vibrio cholerae 623-39]
gi|149740524|gb|EDM54639.1| pmbA protein [Vibrio cholerae MZO-2]
gi|150422641|gb|EDN14596.1| pmbA protein [Vibrio cholerae AM-19226]
gi|229338099|gb|EEO03116.1| PmbA protein [Vibrio cholerae bv. albensis VL426]
gi|229341194|gb|EEO06198.1| PmbA protein [Vibrio cholerae TM 11079-80]
gi|229349336|gb|EEO14292.1| PmbA protein [Vibrio cholerae TMA 21]
gi|262032516|gb|EEY51074.1| PmbA protein [Vibrio cholerae CT 5369-93]
gi|340045608|gb|EGR06549.1| protein pmbA [Vibrio cholerae HE48]
gi|395939086|gb|EJH49772.1| protein pmbA [Vibrio cholerae HC-43B1]
gi|395949635|gb|EJH60255.1| protein pmbA [Vibrio cholerae HE-25]
gi|408628895|gb|EKL01612.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-41B1]
gi|408855604|gb|EKL95303.1| protein pmbA [Vibrio cholerae HC-46B1]
gi|408862909|gb|EKM02408.1| protein pmbA [Vibrio cholerae HC-44C1]
Length = 447
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 167/428 (39%), Positives = 263/428 (61%), Gaps = 17/428 (3%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + + G SV R +++ +E N+D + + +Y + G++STSD +K++
Sbjct: 32 AEVAITKSTGLSVSTRMCEVENVEFNSDGALGITVY----RGQRKGSASTSDLSEKAIRQ 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IA++T++D +AG + + + D L+ P + D A IA E A +
Sbjct: 88 TVLAALDIAQYTSADPYAGPAPKELMVQDIPDLDLFHPDEPNPDVAAQIAIAAERAALGY 147
Query: 157 NSLIVNNENTGVTTQQSHF---LLANSHGFMSGYPFSKHIISISPIAIKGK--EMQRDNW 211
+ I ++ + SHF + NSHG ++ Y S+H IS S I +G+ EM+RD
Sbjct: 148 SKKIKQSDGG---SYDSHFGIRVYGNSHGLLASYASSRHSISCSVIG-EGRNGEMERDYS 203
Query: 212 YSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISG 271
Y+ L PE +G AA+ T+SRL +K+ T + PV+F A +A L+ ISG
Sbjct: 204 YTVARHRDDLWTPESVGLQAAENTVSRLDPQKLKTGQFPVMFAADVATGLIGHLVMAISG 263
Query: 272 NSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQG 331
+LYRKS+FL+D LGK I + I E PH++ SS FD+EGV+TQ ++ +G++
Sbjct: 264 GNLYRKSSFLLDHLGKTILPTWFNISERPHVMRGLASSPFDSEGVRTQDLEIITDGVLAT 323
Query: 332 YFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGIN 391
Y L++Y+A+K+ M TG++GG H+ + S + N ++MLK++ TGLLVTE+MG G+N
Sbjct: 324 YLLTSYAARKMNMTPTGHAGGIHNWYVKS----TGQNYQQMLKELGTGLLVTEVMGQGVN 379
Query: 392 YITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILI 451
+TGDYS+GA G+W+ENG+I+Y V EITI+G L+ M +QIVA+GSD+ TR+ +GSILI
Sbjct: 380 VVTGDYSRGAAGFWVENGEIKYPVSEITIAGNLKQMLQQIVAVGSDIETRSQIQTGSILI 439
Query: 452 ENMIIAGK 459
E+M +AG+
Sbjct: 440 ESMKVAGE 447
>gi|415927157|ref|ZP_11555049.1| Zn-dependent protease, partial [Herbaspirillum frisingense GSF30]
gi|407760097|gb|EKF69500.1| Zn-dependent protease, partial [Herbaspirillum frisingense GSF30]
Length = 214
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 141/213 (66%), Positives = 178/213 (83%)
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
TRKCPVLFEAPLA LL F + +SG +LYRKSTFL+DSLG+++F HIQI+EDPH++G+
Sbjct: 1 TRKCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLLDSLGQQVFPEHIQILEDPHVIGA 60
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
GS+ FD EGV+T KR VVK+G++QGYFLSTYSA+KLGM+TTGNSGG+H+L + S+ T
Sbjct: 61 VGSAPFDEEGVRTVKREVVKDGVVQGYFLSTYSARKLGMQTTGNSGGSHNLTLRSDLTTK 120
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
+D K MLKKM TGLLVTELMG G+NY+TGDYS+GA GYW+ENG IQY VEEITI+G ++
Sbjct: 121 ADTFKGMLKKMGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITIAGNMK 180
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+M +QIVA+G+D L R + +GSIL+ENM IAG
Sbjct: 181 DMLRQIVAVGNDTLVRGTKETGSILLENMTIAG 213
>gi|229844893|ref|ZP_04465031.1| PmbA [Haemophilus influenzae 6P18H1]
gi|229812274|gb|EEP47965.1| PmbA [Haemophilus influenzae 6P18H1]
Length = 451
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 270/444 (60%), Gaps = 8/444 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + A K GAS + + + +G SV R +I+ +E ND + + +Y+
Sbjct: 15 EQELRQAVSFAVELATKAGAS-AEVAVTKVSGLSVSARLQEIENVEFTNDGALGISVYMG 73
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K GN+STSD + ++ + + AA IA++T+ D+ GL D++ + N D +LY
Sbjct: 74 QQK----GNASTSDLSESAIKNAVEAALAIAKYTSPDDCTGLADKDLMAFNAPDLELYHA 129
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+ +D A +A + E A + I+N+ + + NSHG + Y S++ +
Sbjct: 130 ADVDVDKATELALQAEKAALEADERIINSNGASFNSHTGVKVYGNSHGMLQSYLSSRYSL 189
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S I ++ D Y+ + + KL P +G AK+ +SRL +K+STR+ PV+F
Sbjct: 190 SCSVIGGVEDALENDYEYTISREFDKLQSPIWVGKNCAKKVVSRLNPQKLSTREVPVIFL 249
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L++ FA ISG SLYRKS+FL+D LGK++ I E PH+L S+ FD+E
Sbjct: 250 NDVATGLISHFAAAISGGSLYRKSSFLLDYLGKQVLPDWFSISERPHLLRRLASTPFDSE 309
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+TQ R +V+NGI+Q Y +++YS KKLGM +TG++GG H+ ++ N T L +L+
Sbjct: 310 GVRTQDREIVENGILQTYLVASYSGKKLGMPSTGHAGGIHNWLVKPNLTG---GLTALLR 366
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M GLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+LQ+M K ++A+
Sbjct: 367 QMGAGLLVTDVMGQGVNIVTGDYSRGASGFWVENGEIQYPVAEITIAGQLQDMLKNMLAV 426
Query: 435 GSDVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GSIL++ M I+G
Sbjct: 427 ADDIEHRSNIQTGSILLDKMKISG 450
>gi|421356138|ref|ZP_15806468.1| protein pmbA [Vibrio cholerae HE-45]
gi|395949252|gb|EJH59878.1| protein pmbA [Vibrio cholerae HE-45]
Length = 447
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 167/428 (39%), Positives = 263/428 (61%), Gaps = 17/428 (3%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + + G SV R +++ +E N+D + + +Y + G++STSD +K++
Sbjct: 32 AEVAITKSTGLSVSTRMCEVENVEFNSDGALGITVY----RGQRKGSASTSDLSEKAIRQ 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IA++T++D +AG + + + D L+ P + D A IA E A +
Sbjct: 88 TVLAALDIAQYTSADPYAGPAPKELMVQDIPDLDLFHPDEPNPDVAAQIAIAAERAALGY 147
Query: 157 NSLIVNNENTGVTTQQSHF---LLANSHGFMSGYPFSKHIISISPIAIKGK--EMQRDNW 211
+ I ++ + SHF + NSHG ++ Y S+H IS S I +G+ EM+RD
Sbjct: 148 SKKIKQSDGG---SYDSHFGVRVYGNSHGLLASYASSRHSISCSVIG-EGRNGEMERDYS 203
Query: 212 YSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISG 271
Y+ L PE +G AA+ T+SRL +K+ T + PV+F A +A L+ ISG
Sbjct: 204 YTVARHRDDLWTPESVGLQAAENTVSRLDPQKLKTGQFPVMFAADVATGLIGHLVMAISG 263
Query: 272 NSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQG 331
+LYRKS+FL+D LGK I + I E PH++ SS FD+EGV+TQ ++ +G++
Sbjct: 264 GNLYRKSSFLLDHLGKTILPTWFNISERPHVMRGLASSPFDSEGVRTQDLEIITDGVLAT 323
Query: 332 YFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGIN 391
Y L++Y+A+K+ M TG++GG H+ + S + N ++MLK++ TGLLVTE+MG G+N
Sbjct: 324 YLLTSYAARKMNMTPTGHAGGIHNWYVKS----TGQNYQQMLKELGTGLLVTEVMGQGVN 379
Query: 392 YITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILI 451
+TGDYS+GA G+W+ENG+I+Y V EITI+G L+ M +QIVA+GSD+ TR+ +GSILI
Sbjct: 380 VVTGDYSRGAAGFWVENGEIKYPVSEITIAGNLKQMLQQIVAVGSDIETRSQIQTGSILI 439
Query: 452 ENMIIAGK 459
E+M +AG+
Sbjct: 440 ESMKVAGE 447
>gi|397685873|ref|YP_006523192.1| PmbA protein [Pseudomonas stutzeri DSM 10701]
gi|395807429|gb|AFN76834.1| PmbA protein [Pseudomonas stutzeri DSM 10701]
Length = 448
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 171/442 (38%), Positives = 264/442 (59%), Gaps = 8/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++ Q +++ A++ GAS + + G S VR+ +++ +E N D+ + +Y+ K
Sbjct: 15 LREKVQRIIDEARRQGASACEVSVSMEQGLSTSVRQHEVETVEFNRDQGFGITLYVGQRK 74
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++ST+ +++ +T+ AA IAR + D FAGL D + + D L+ PW L
Sbjct: 75 ----GSASTTGSGDEAIRETVAAALAIARHASEDEFAGLADASLMAREVPDLDLHHPWEL 130
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
S D+A +A CE AF ++ I N + T ++T Q NSHGF+ Y S+H +S
Sbjct: 131 SPDEAVELALGCEAAAFATDARIRNADGTTLSTHQGCRAYGNSHGFIGSYCSSRHSLSCV 190
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +MQRD Y + L IG AA+R + RL A+ I T PVLF A L
Sbjct: 191 MIAEADGQMQRDYHYDVSRVAADLADAASIGRRAAERAVRRLGARPIPTCDVPVLFTADL 250
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L F ISG ++YRKS++L ++LG+ +F + + E PH+ S+ +D +G+
Sbjct: 251 ATGLFGHFLAAISGANIYRKSSYLENALGQTLFPEWLSLDERPHLPRGLASAGYDGDGLA 310
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V++G + Y L TYS +KLGM +T N+GG H+L + T ++ ++++M
Sbjct: 311 TYAKPFVEDGRLLSYVLGTYSGRKLGMPSTANAGGVHNLFV----THGDEDQAALIRRMG 366
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GLLVTELMG G+N +TGDYS+GA GYW+ENG+IQ+ V+E+TI+G L++MF+QIVA+G D
Sbjct: 367 RGLLVTELMGQGLNLVTGDYSRGAGGYWVENGEIQFPVQEVTIAGNLRDMFRQIVAVGCD 426
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
V R+S +GS+LIE M +AG+
Sbjct: 427 VEKRSSIRTGSVLIERMKVAGR 448
>gi|90580184|ref|ZP_01235991.1| putative pmbA protein [Photobacterium angustum S14]
gi|90438486|gb|EAS63670.1| putative pmbA protein [Vibrio angustum S14]
Length = 447
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 174/454 (38%), Positives = 276/454 (60%), Gaps = 12/454 (2%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
R + + E + L A K A + + N+ G SV R ++ +E N+D +
Sbjct: 4 REQVAQQRVELEAAVAKALEVAGK-QADAAEVAINKTTGISVSTRMCDVENVEFNSDGAL 62
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
+ +Y + K G++STSD + ++ T+ AA +IA +T+ D FAG + + +
Sbjct: 63 GITVYRGNRK----GSASTSDLSESAIAQTVAAALDIANYTSEDPFAGPGPKELMARDIP 118
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ P D A IA E A ++ I ++ + + NSHG ++ Y
Sbjct: 119 DLDLFHPDEPEPDRAAAIAIAAEEAALAYDPRIKQSDGASYDSHYGVRVYGNSHGMLASY 178
Query: 188 PFSKHIISISPIAIKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
S+H IS IA +GK EM+RD Y+++ ++ PE +G +AA+RT+ R+ A+K++
Sbjct: 179 ASSRHSISCCVIA-EGKNGEMERDYSYTTSRLASEMWTPERVGRHAAERTVGRVDAQKLT 237
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
TR+ PV+F A +A L ISG +LYRKS+FLVD LG++IF + I E PHIL
Sbjct: 238 TREAPVMFAADIATGLFGHLVMGISGANLYRKSSFLVDKLGEQIFPEWLGISERPHILRG 297
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
S+ FD+EG+ T R ++ +G++Q Y L++Y+A+K+ M+ TG++GG H+ ++ S +
Sbjct: 298 MASTPFDSEGLATYDREIITDGVLQTYLLTSYAARKMNMQPTGHAGGIHNWMVKS----T 353
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
++ ++MLKKM+ GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L+
Sbjct: 354 GESFEQMLKKMDRGLLVTELMGQGVNIVTGDYSRGAAGFWVENGQIQYPVSEITIAGNLK 413
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+M + IVAIG+D TR+ +GS+L+++M IAG+
Sbjct: 414 DMIQNIVAIGNDTETRSQILTGSMLLDSMKIAGE 447
>gi|15642530|ref|NP_232163.1| peptidase PmbA [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121587889|ref|ZP_01677645.1| pmbA protein [Vibrio cholerae 2740-80]
gi|153817988|ref|ZP_01970655.1| pmbA protein [Vibrio cholerae NCTC 8457]
gi|153822946|ref|ZP_01975613.1| pmbA protein [Vibrio cholerae B33]
gi|227082653|ref|YP_002811204.1| peptidase PmbA [Vibrio cholerae M66-2]
gi|229507409|ref|ZP_04396914.1| PmbA protein [Vibrio cholerae BX 330286]
gi|229509666|ref|ZP_04399147.1| PmbA protein [Vibrio cholerae B33]
gi|229516791|ref|ZP_04406237.1| PmbA protein [Vibrio cholerae RC9]
gi|229606916|ref|YP_002877564.1| peptidase PmbA [Vibrio cholerae MJ-1236]
gi|254851078|ref|ZP_05240428.1| pmbA protein [Vibrio cholerae MO10]
gi|255744489|ref|ZP_05418441.1| PmbA protein [Vibrio cholera CIRS 101]
gi|262154687|ref|ZP_06028813.1| PmbA protein [Vibrio cholerae INDRE 91/1]
gi|298500637|ref|ZP_07010441.1| pmbA protein [Vibrio cholerae MAK 757]
gi|360036406|ref|YP_004938169.1| peptidase PmbA [Vibrio cholerae O1 str. 2010EL-1786]
gi|379742317|ref|YP_005334286.1| peptidase PmbA [Vibrio cholerae IEC224]
gi|417814548|ref|ZP_12461200.1| protein pmbA [Vibrio cholerae HC-49A2]
gi|417818287|ref|ZP_12464914.1| protein pmbA [Vibrio cholerae HCUF01]
gi|418335529|ref|ZP_12944437.1| protein pmbA [Vibrio cholerae HC-06A1]
gi|418338943|ref|ZP_12947836.1| protein pmbA [Vibrio cholerae HC-23A1]
gi|418347065|ref|ZP_12951817.1| protein pmbA [Vibrio cholerae HC-28A1]
gi|418350822|ref|ZP_12955552.1| protein pmbA [Vibrio cholerae HC-43A1]
gi|418356497|ref|ZP_12959215.1| protein pmbA [Vibrio cholerae HC-61A1]
gi|419827474|ref|ZP_14350972.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1033(6)]
gi|421318716|ref|ZP_15769283.1| protein pmbA [Vibrio cholerae CP1032(5)]
gi|421322279|ref|ZP_15772830.1| protein pmbA [Vibrio cholerae CP1038(11)]
gi|421326077|ref|ZP_15776600.1| protein pmbA [Vibrio cholerae CP1041(14)]
gi|421329736|ref|ZP_15780245.1| protein pmbA [Vibrio cholerae CP1042(15)]
gi|421333691|ref|ZP_15784167.1| protein pmbA [Vibrio cholerae CP1046(19)]
gi|421337234|ref|ZP_15787694.1| protein pmbA [Vibrio cholerae CP1048(21)]
gi|421340659|ref|ZP_15791090.1| protein pmbA [Vibrio cholerae HC-20A2]
gi|421348516|ref|ZP_15798892.1| protein pmbA [Vibrio cholerae HC-46A1]
gi|422897622|ref|ZP_16935059.1| protein pmbA [Vibrio cholerae HC-40A1]
gi|422903822|ref|ZP_16938783.1| protein pmbA [Vibrio cholerae HC-48A1]
gi|422907704|ref|ZP_16942496.1| protein pmbA [Vibrio cholerae HC-70A1]
gi|422914544|ref|ZP_16949047.1| protein pmbA [Vibrio cholerae HFU-02]
gi|422926749|ref|ZP_16959759.1| protein pmbA [Vibrio cholerae HC-38A1]
gi|423146070|ref|ZP_17133662.1| protein pmbA [Vibrio cholerae HC-19A1]
gi|423150773|ref|ZP_17138059.1| protein pmbA [Vibrio cholerae HC-21A1]
gi|423154582|ref|ZP_17141745.1| protein pmbA [Vibrio cholerae HC-22A1]
gi|423157649|ref|ZP_17144740.1| protein pmbA [Vibrio cholerae HC-32A1]
gi|423161220|ref|ZP_17148157.1| protein pmbA [Vibrio cholerae HC-33A2]
gi|423166052|ref|ZP_17152768.1| protein pmbA [Vibrio cholerae HC-48B2]
gi|423732080|ref|ZP_17705380.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-17A1]
gi|423772649|ref|ZP_17713644.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-50A2]
gi|423897129|ref|ZP_17727688.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-62A1]
gi|423932347|ref|ZP_17732082.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-77A1]
gi|424003496|ref|ZP_17746569.1| protein pmbA [Vibrio cholerae HC-17A2]
gi|424007290|ref|ZP_17750258.1| protein pmbA [Vibrio cholerae HC-37A1]
gi|424025270|ref|ZP_17764918.1| protein pmbA [Vibrio cholerae HC-62B1]
gi|424028156|ref|ZP_17767756.1| protein pmbA [Vibrio cholerae HC-69A1]
gi|424587436|ref|ZP_18027013.1| protein pmbA [Vibrio cholerae CP1030(3)]
gi|424596091|ref|ZP_18035408.1| protein pmbA [Vibrio cholerae CP1040(13)]
gi|424599999|ref|ZP_18039176.1| protein pmbA [Vibrio Cholerae CP1044(17)]
gi|424602760|ref|ZP_18041898.1| protein pmbA [Vibrio cholerae CP1047(20)]
gi|424607696|ref|ZP_18046635.1| protein pmbA [Vibrio cholerae CP1050(23)]
gi|424611512|ref|ZP_18050349.1| protein pmbA [Vibrio cholerae HC-39A1]
gi|424614339|ref|ZP_18053122.1| protein pmbA [Vibrio cholerae HC-41A1]
gi|424618307|ref|ZP_18056976.1| protein pmbA [Vibrio cholerae HC-42A1]
gi|424623092|ref|ZP_18061594.1| protein pmbA [Vibrio cholerae HC-47A1]
gi|424646053|ref|ZP_18083786.1| protein pmbA [Vibrio cholerae HC-56A2]
gi|424653820|ref|ZP_18091198.1| protein pmbA [Vibrio cholerae HC-57A2]
gi|424657640|ref|ZP_18094923.1| protein pmbA [Vibrio cholerae HC-81A2]
gi|440710756|ref|ZP_20891403.1| PmbA protein [Vibrio cholerae 4260B]
gi|443504870|ref|ZP_21071821.1| protein pmbA [Vibrio cholerae HC-64A1]
gi|443508776|ref|ZP_21075530.1| protein pmbA [Vibrio cholerae HC-65A1]
gi|443512614|ref|ZP_21079246.1| protein pmbA [Vibrio cholerae HC-67A1]
gi|443516173|ref|ZP_21082677.1| protein pmbA [Vibrio cholerae HC-68A1]
gi|443519966|ref|ZP_21086352.1| protein pmbA [Vibrio cholerae HC-71A1]
gi|443524858|ref|ZP_21091060.1| protein pmbA [Vibrio cholerae HC-72A2]
gi|443532441|ref|ZP_21098454.1| protein pmbA [Vibrio cholerae HC-7A1]
gi|443536256|ref|ZP_21102121.1| protein pmbA [Vibrio cholerae HC-80A1]
gi|443539786|ref|ZP_21105638.1| protein pmbA [Vibrio cholerae HC-81A1]
gi|449055031|ref|ZP_21733699.1| TldE/PmbA protein [Vibrio cholerae O1 str. Inaba G4222]
gi|9657118|gb|AAF95676.1| pmbA protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121547859|gb|EAX57944.1| pmbA protein [Vibrio cholerae 2740-80]
gi|126511423|gb|EAZ74017.1| pmbA protein [Vibrio cholerae NCTC 8457]
gi|126519516|gb|EAZ76739.1| pmbA protein [Vibrio cholerae B33]
gi|227010541|gb|ACP06753.1| pmbA protein [Vibrio cholerae M66-2]
gi|229345854|gb|EEO10826.1| PmbA protein [Vibrio cholerae RC9]
gi|229353140|gb|EEO18079.1| PmbA protein [Vibrio cholerae B33]
gi|229354914|gb|EEO19835.1| PmbA protein [Vibrio cholerae BX 330286]
gi|229369571|gb|ACQ59994.1| PmbA protein [Vibrio cholerae MJ-1236]
gi|254846783|gb|EET25197.1| pmbA protein [Vibrio cholerae MO10]
gi|255738014|gb|EET93407.1| PmbA protein [Vibrio cholera CIRS 101]
gi|262030527|gb|EEY49165.1| PmbA protein [Vibrio cholerae INDRE 91/1]
gi|297540806|gb|EFH76863.1| pmbA protein [Vibrio cholerae MAK 757]
gi|340035108|gb|EGQ96089.1| protein pmbA [Vibrio cholerae HCUF01]
gi|340035358|gb|EGQ96338.1| protein pmbA [Vibrio cholerae HC-49A2]
gi|341619462|gb|EGS45271.1| protein pmbA [Vibrio cholerae HC-48A1]
gi|341619571|gb|EGS45374.1| protein pmbA [Vibrio cholerae HC-70A1]
gi|341620386|gb|EGS46159.1| protein pmbA [Vibrio cholerae HC-40A1]
gi|341635839|gb|EGS60544.1| protein pmbA [Vibrio cholerae HFU-02]
gi|341645234|gb|EGS69382.1| protein pmbA [Vibrio cholerae HC-38A1]
gi|356416122|gb|EHH69758.1| protein pmbA [Vibrio cholerae HC-06A1]
gi|356416707|gb|EHH70331.1| protein pmbA [Vibrio cholerae HC-21A1]
gi|356421832|gb|EHH75320.1| protein pmbA [Vibrio cholerae HC-19A1]
gi|356427327|gb|EHH80577.1| protein pmbA [Vibrio cholerae HC-22A1]
gi|356428986|gb|EHH82205.1| protein pmbA [Vibrio cholerae HC-28A1]
gi|356429236|gb|EHH82454.1| protein pmbA [Vibrio cholerae HC-23A1]
gi|356438638|gb|EHH91642.1| protein pmbA [Vibrio cholerae HC-32A1]
gi|356443298|gb|EHH96120.1| protein pmbA [Vibrio cholerae HC-33A2]
gi|356443714|gb|EHH96532.1| protein pmbA [Vibrio cholerae HC-43A1]
gi|356449214|gb|EHI01970.1| protein pmbA [Vibrio cholerae HC-48B2]
gi|356451711|gb|EHI04394.1| protein pmbA [Vibrio cholerae HC-61A1]
gi|356647560|gb|AET27615.1| peptidase PmbA [Vibrio cholerae O1 str. 2010EL-1786]
gi|378795827|gb|AFC59298.1| peptidase PmbA [Vibrio cholerae IEC224]
gi|395915629|gb|EJH26463.1| protein pmbA [Vibrio cholerae CP1032(5)]
gi|395915735|gb|EJH26567.1| protein pmbA [Vibrio cholerae CP1041(14)]
gi|395916828|gb|EJH27657.1| protein pmbA [Vibrio cholerae CP1038(11)]
gi|395926717|gb|EJH37486.1| protein pmbA [Vibrio cholerae CP1042(15)]
gi|395927053|gb|EJH37817.1| protein pmbA [Vibrio cholerae CP1046(19)]
gi|395930262|gb|EJH41010.1| protein pmbA [Vibrio cholerae CP1048(21)]
gi|395938646|gb|EJH49333.1| protein pmbA [Vibrio cholerae HC-20A2]
gi|395940880|gb|EJH51560.1| protein pmbA [Vibrio cholerae HC-46A1]
gi|395957627|gb|EJH68162.1| protein pmbA [Vibrio cholerae HC-56A2]
gi|395958108|gb|EJH68615.1| protein pmbA [Vibrio cholerae HC-57A2]
gi|395960675|gb|EJH71039.1| protein pmbA [Vibrio cholerae HC-42A1]
gi|395969907|gb|EJH79726.1| protein pmbA [Vibrio cholerae HC-47A1]
gi|395971936|gb|EJH81564.1| protein pmbA [Vibrio cholerae CP1030(3)]
gi|395974265|gb|EJH83797.1| protein pmbA [Vibrio cholerae CP1047(20)]
gi|408005949|gb|EKG44129.1| protein pmbA [Vibrio cholerae HC-39A1]
gi|408010560|gb|EKG48414.1| protein pmbA [Vibrio cholerae HC-41A1]
gi|408030436|gb|EKG67100.1| protein pmbA [Vibrio cholerae CP1040(13)]
gi|408040545|gb|EKG76724.1| protein pmbA [Vibrio Cholerae CP1044(17)]
gi|408041666|gb|EKG77765.1| protein pmbA [Vibrio cholerae CP1050(23)]
gi|408051608|gb|EKG86689.1| protein pmbA [Vibrio cholerae HC-81A2]
gi|408606894|gb|EKK80307.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1033(6)]
gi|408622022|gb|EKK95011.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-17A1]
gi|408632616|gb|EKL05056.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-50A2]
gi|408653176|gb|EKL24349.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-77A1]
gi|408653782|gb|EKL24931.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-62A1]
gi|408844031|gb|EKL84167.1| protein pmbA [Vibrio cholerae HC-37A1]
gi|408844600|gb|EKL84724.1| protein pmbA [Vibrio cholerae HC-17A2]
gi|408869417|gb|EKM08716.1| protein pmbA [Vibrio cholerae HC-62B1]
gi|408878010|gb|EKM17024.1| protein pmbA [Vibrio cholerae HC-69A1]
gi|439973489|gb|ELP49702.1| PmbA protein [Vibrio cholerae 4260B]
gi|443430593|gb|ELS73152.1| protein pmbA [Vibrio cholerae HC-64A1]
gi|443434425|gb|ELS80578.1| protein pmbA [Vibrio cholerae HC-65A1]
gi|443438256|gb|ELS87977.1| protein pmbA [Vibrio cholerae HC-67A1]
gi|443442380|gb|ELS95689.1| protein pmbA [Vibrio cholerae HC-68A1]
gi|443446210|gb|ELT02876.1| protein pmbA [Vibrio cholerae HC-71A1]
gi|443449138|gb|ELT09440.1| protein pmbA [Vibrio cholerae HC-72A2]
gi|443456615|gb|ELT24013.1| protein pmbA [Vibrio cholerae HC-7A1]
gi|443460398|gb|ELT31484.1| protein pmbA [Vibrio cholerae HC-80A1]
gi|443464470|gb|ELT39132.1| protein pmbA [Vibrio cholerae HC-81A1]
gi|448265649|gb|EMB02883.1| TldE/PmbA protein [Vibrio cholerae O1 str. Inaba G4222]
Length = 447
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 167/426 (39%), Positives = 262/426 (61%), Gaps = 13/426 (3%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + + G SV R +++ +E N+D + + +Y + G++STSD +K++
Sbjct: 32 AEVAITKSTGLSVSTRMCEVENVEFNSDGALGITVY----RGQRKGSASTSDLSEKAIRQ 87
Query: 97 TINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFN 155
T+ AA +IA++T++D +AG P E ++ P D L+ P + D A IA E A
Sbjct: 88 TVLAALDIAQYTSADPYAGPAPKELMVQEIP-DLDLFHPDEPNPDVAAQIAIAAERAALG 146
Query: 156 FNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK--EMQRDNWYS 213
++ I ++ + + NSHG ++ Y S+H IS S I +G+ EM+RD Y+
Sbjct: 147 YSKKIKQSDGGSYDSHYGVRVYGNSHGLLASYASSRHSISCSVIG-EGRNGEMERDYSYT 205
Query: 214 SNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNS 273
L PE +G AA+ T+SRL +K+ T + PV+F A +A L+ ISG +
Sbjct: 206 VARHRDDLWTPESVGLQAAENTVSRLDPQKLKTGQFPVMFAADVATGLIGHLVMAISGGN 265
Query: 274 LYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYF 333
LYRKS+FL+D LGK I + I E PH++ SS FD+EGV+TQ ++ +G++ Y
Sbjct: 266 LYRKSSFLLDHLGKTILPTWFNISERPHVMRGLASSPFDSEGVRTQDLEIITDGVLATYL 325
Query: 334 LSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYI 393
L++Y+A+K+ M TG++GG H+ + S + N ++MLK++ TGLLVTE+MG G+N +
Sbjct: 326 LTSYAARKMNMTPTGHAGGIHNWYVKS----TGQNYQQMLKELGTGLLVTEVMGQGVNVV 381
Query: 394 TGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIEN 453
TGDYS+GA G+W+ENG+I+Y V EITI+G L+ M +QIVA+GSD+ TR+ +GSILIE+
Sbjct: 382 TGDYSRGAAGFWVENGEIKYPVSEITIAGNLKQMLQQIVAVGSDIETRSQIQTGSILIES 441
Query: 454 MIIAGK 459
M +AG+
Sbjct: 442 MKVAGE 447
>gi|422923824|ref|ZP_16956964.1| protein pmbA [Vibrio cholerae BJG-01]
gi|341643380|gb|EGS67671.1| protein pmbA [Vibrio cholerae BJG-01]
Length = 447
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 170/429 (39%), Positives = 265/429 (61%), Gaps = 19/429 (4%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + + G SV R +++ +E N+D + + +Y + G++STSD +K++
Sbjct: 32 AEVAITKSTGLSVSTRMCEVENVEFNSDGALGITVY----RGQRKGSASTSDLSEKAIRQ 87
Query: 97 TINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFN 155
T+ AA +IA++T++D +AG P E ++ P D L+ P + D A IA E A
Sbjct: 88 TVLAALDIAQYTSADPYAGPAPKELMVQEIP-DLDLFHPDEPNPDVAAQIAIAAERAALG 146
Query: 156 FNSLIVNNENTGVTTQQSHF---LLANSHGFMSGYPFSKHIISISPIAIKGK--EMQRDN 210
++ I ++ + SHF + NSHG ++ Y S+H IS S I +G+ EM+RD
Sbjct: 147 YSKKIKQSDGG---SYDSHFGIRVYGNSHGLLASYASSRHSISCSVIG-EGRNGEMERDY 202
Query: 211 WYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLIS 270
Y+ L PE +G AA+ T+SRL +K+ T + PV+F A +A L+ IS
Sbjct: 203 SYTVARHRDDLWMPESVGLQAAENTVSRLDPQKLKTGQFPVMFAADVATGLIGHLVMAIS 262
Query: 271 GNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQ 330
G +LYRKS+FL+D LGK I + I E PH++ SS FD+EGV+TQ ++ +G++
Sbjct: 263 GGNLYRKSSFLLDHLGKTILPTWFNISERPHVMRGLASSPFDSEGVRTQDLEIITDGVLA 322
Query: 331 GYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGI 390
Y L++Y+A+K+ M TG++GG H+ + S + N ++MLK++ TGLLVTE+MG G+
Sbjct: 323 TYLLTSYAARKMNMTPTGHAGGIHNWYVKS----TGQNYQQMLKELGTGLLVTEVMGQGV 378
Query: 391 NYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSIL 450
N +TGDYS+GA G+W+ENG+I+Y V EITI+G L+ M +QIVA+GSD+ TR+ +GSIL
Sbjct: 379 NVVTGDYSRGAAGFWVENGEIKYPVSEITIAGNLKQMLQQIVAVGSDIETRSQIQTGSIL 438
Query: 451 IENMIIAGK 459
IE+M +AG+
Sbjct: 439 IESMKVAGE 447
>gi|336451791|ref|ZP_08622228.1| Putative Zn-dependent protease-like protein [Idiomarina sp. A28L]
gi|336281604|gb|EGN74884.1| Putative Zn-dependent protease-like protein [Idiomarina sp. A28L]
Length = 460
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 167/424 (39%), Positives = 252/424 (59%), Gaps = 4/424 (0%)
Query: 35 SHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSL 94
S + G SV R +I+ +E N D + + +Y K G++STSD +++
Sbjct: 40 SAAECALAHSRGLSVSTRLEEIETVEFNQDGTLGITVYRGQSK----GSASTSDLSSEAV 95
Query: 95 YDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAF 154
+ A IAR+T +D +GL D+ + D +L+ S D A A CE
Sbjct: 96 LIAVEKADAIARWTEADACSGLADKELMASGYADPELFYAANQSPDYAAEQALACEKVML 155
Query: 155 NFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSS 214
+ I+N++ ++ + NSHGF Y S+ +S PIA +G +M+RD Y+
Sbjct: 156 AADPRIINSDGAHYSSHCGFRVYGNSHGFTGHYMSSRQSLSCMPIAKEGDKMERDYAYTM 215
Query: 215 NSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSL 274
+P L+ PE + AA T+SRL A+ I T PV+F + LA + FA ISG +L
Sbjct: 216 ARNPALLNTPEAVALEAAAATVSRLGARSIPTCSAPVIFHSDLAHGIFGQFAGAISGGNL 275
Query: 275 YRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFL 334
YRKSTFL+D LGK+IF + I E+P + G +S FD+EGV T++R +V G++ Y L
Sbjct: 276 YRKSTFLLDHLGKEIFPDWLSIHENPLVPGGLATSPFDHEGVATKERDIVTAGVLDTYLL 335
Query: 335 STYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYIT 394
++Y+A+KLGM+TTG++GG H+ + + + +L + K+M TGLLVTELMG GIN +T
Sbjct: 336 TSYAARKLGMQTTGHAGGIHNWYVQAQAPQLDADLAALCKRMGTGLLVTELMGQGINLVT 395
Query: 395 GDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENM 454
GDYS+GA G+W+ENG+IQ+ V E+TI+G L++MFK +VA+ +DV R+ GS+L+ +M
Sbjct: 396 GDYSRGAAGFWVENGEIQFPVTEVTIAGNLRDMFKNMVAMAADVDPRHGVQCGSVLLADM 455
Query: 455 IIAG 458
IAG
Sbjct: 456 KIAG 459
>gi|332139677|ref|YP_004425415.1| pmbA protein [Alteromonas macleodii str. 'Deep ecotype']
gi|327549699|gb|AEA96417.1| pmbA protein [Alteromonas macleodii str. 'Deep ecotype']
Length = 443
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 171/443 (38%), Positives = 255/443 (57%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
++ Q + D+L A GA+ + ++ G +V R +++ +E ND + + +Y+
Sbjct: 8 ADIQNVVDDVLKLAVSKGATQAEASMSKVQGIAVSSRMQEVENVEFTNDGGLGISVYV-- 65
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
GK+ G++ST+D K +L + A +IAR+T+ D GL D + + D LY P
Sbjct: 66 GKRK--GSASTADLSKAALTLAVEKAVDIARYTSEDPCTGLADADLIATEFPDLDLYHPE 123
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L + A E A +++S I N++ + N+HG +GYP S++ +S
Sbjct: 124 ELDTEKAIKTTIEAEKAAMDYDSRITNSDGASYNANLGMRVYGNTHGINAGYPSSRYSLS 183
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD Y+ + L +G AAK T+ RL A+KI+T PVL
Sbjct: 184 CMVIGAQDDDMQRDYAYTVSRKSSLLQSAASVGIDAAKATVDRLGARKINTANVPVLLHR 243
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L + ISG SLYR+S+FL+DSLGK++F + I E P I G SSSFDNEG
Sbjct: 244 DIASSLFGHYVGAISGGSLYRRSSFLLDSLGKQVFPEWLNIEERPLIKGGLASSSFDNEG 303
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V +V G + Y +TYS++KL ++ G++GG H+ ++ T SD ++LK+
Sbjct: 304 VACADMTIVDAGQLATYLYTTYSSRKLNTRSNGHAGGIHNWLV--GDTGHSD--ADLLKE 359
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGL VTELMG G+N +TGDYS+GA GYW+ENG IQY V E+TI+G L++MFK IVAIG
Sbjct: 360 MGTGLFVTELMGQGVNGVTGDYSRGAAGYWVENGIIQYPVHEVTIAGNLKDMFKGIVAIG 419
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
++ R S +GS+LI+ M IAG
Sbjct: 420 AEKDVRGSVQTGSVLIDQMKIAG 442
>gi|419830964|ref|ZP_14354448.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-1A2]
gi|419834650|ref|ZP_14358103.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-61A2]
gi|422911356|ref|ZP_16945979.1| protein pmbA [Vibrio cholerae HE-09]
gi|422918364|ref|ZP_16952677.1| protein pmbA [Vibrio cholerae HC-02A1]
gi|423823262|ref|ZP_17717269.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-55C2]
gi|423857223|ref|ZP_17721071.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-59A1]
gi|423884800|ref|ZP_17724664.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-60A1]
gi|423998785|ref|ZP_17742034.1| protein pmbA [Vibrio cholerae HC-02C1]
gi|424017687|ref|ZP_17757512.1| protein pmbA [Vibrio cholerae HC-55B2]
gi|424020767|ref|ZP_17760547.1| protein pmbA [Vibrio cholerae HC-59B1]
gi|424625985|ref|ZP_18064443.1| protein pmbA [Vibrio cholerae HC-50A1]
gi|424630469|ref|ZP_18068750.1| protein pmbA [Vibrio cholerae HC-51A1]
gi|424634516|ref|ZP_18072613.1| protein pmbA [Vibrio cholerae HC-52A1]
gi|424637594|ref|ZP_18075599.1| protein pmbA [Vibrio cholerae HC-55A1]
gi|424641498|ref|ZP_18079377.1| protein pmbA [Vibrio cholerae HC-56A1]
gi|424649571|ref|ZP_18087230.1| protein pmbA [Vibrio cholerae HC-57A1]
gi|424661027|ref|ZP_18098273.1| protein pmbA [Vibrio cholerae HE-16]
gi|443528652|ref|ZP_21094685.1| protein pmbA [Vibrio cholerae HC-78A1]
gi|341631561|gb|EGS56447.1| protein pmbA [Vibrio cholerae HE-09]
gi|341635210|gb|EGS59932.1| protein pmbA [Vibrio cholerae HC-02A1]
gi|408010962|gb|EKG48804.1| protein pmbA [Vibrio cholerae HC-50A1]
gi|408016882|gb|EKG54407.1| protein pmbA [Vibrio cholerae HC-52A1]
gi|408021851|gb|EKG59085.1| protein pmbA [Vibrio cholerae HC-56A1]
gi|408022276|gb|EKG59493.1| protein pmbA [Vibrio cholerae HC-55A1]
gi|408031082|gb|EKG67721.1| protein pmbA [Vibrio cholerae HC-57A1]
gi|408049603|gb|EKG84794.1| protein pmbA [Vibrio cholerae HE-16]
gi|408053234|gb|EKG88253.1| protein pmbA [Vibrio cholerae HC-51A1]
gi|408619465|gb|EKK92494.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-1A2]
gi|408634180|gb|EKL06448.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-55C2]
gi|408639449|gb|EKL11259.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-59A1]
gi|408639842|gb|EKL11647.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-60A1]
gi|408648439|gb|EKL19779.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-61A2]
gi|408852017|gb|EKL91867.1| protein pmbA [Vibrio cholerae HC-02C1]
gi|408858319|gb|EKL97995.1| protein pmbA [Vibrio cholerae HC-55B2]
gi|408866229|gb|EKM05613.1| protein pmbA [Vibrio cholerae HC-59B1]
gi|443452989|gb|ELT16823.1| protein pmbA [Vibrio cholerae HC-78A1]
Length = 447
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 168/426 (39%), Positives = 262/426 (61%), Gaps = 13/426 (3%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + + G SV R +++ +E N+D + + +Y + G++STSD +K++
Sbjct: 32 AEVAITKSTGLSVSTRMCEVENVEFNSDGALGITVY----RGQRKGSASTSDLSEKAIRQ 87
Query: 97 TINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFN 155
T+ AA +IA++T++D +AG P E ++ P D L+ P + D A IA E A
Sbjct: 88 TVLAALDIAQYTSADPYAGPAPKELMVQEIP-DLDLFHPDEPNPDVAAQIAIAAERAALG 146
Query: 156 FNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK--EMQRDNWYS 213
++ I ++ + + NSHG ++ Y S+H IS S I +G+ EM+RD Y+
Sbjct: 147 YSKKIKQSDGGSYDSHYGIRVYGNSHGLLASYASSRHSISCSVIG-EGRNGEMERDYSYT 205
Query: 214 SNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNS 273
L PE +G AA+ T+SRL +K+ T + PV+F A +A L+ ISG +
Sbjct: 206 VARHRDDLWTPESVGLQAAENTVSRLDPQKLKTGQFPVMFAADVATGLIGHLVMAISGGN 265
Query: 274 LYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYF 333
LYRKS+FL+D LGK I S I E PH++ SS FD+EGV+TQ ++ +G++ Y
Sbjct: 266 LYRKSSFLLDHLGKSILPSWFNISERPHVMRGLASSPFDSEGVRTQDLEIITDGVLATYL 325
Query: 334 LSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYI 393
L++Y+A+K+ M TG++GG H+ + S + N ++MLK++ TGLLVTE+MG G+N +
Sbjct: 326 LTSYAARKMNMTPTGHAGGIHNWYVKS----TGQNYQQMLKELGTGLLVTEVMGQGMNVV 381
Query: 394 TGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIEN 453
TGDYS+GA G+W+ENG+I+Y V EITI+G L+ M +QIVA+GSD+ TR+ +GSILIE+
Sbjct: 382 TGDYSRGAAGFWVENGEIKYPVSEITIAGNLKQMLQQIVAVGSDIETRSQIQTGSILIES 441
Query: 454 MIIAGK 459
M +AG+
Sbjct: 442 MKVAGE 447
>gi|147673242|ref|YP_001218031.1| peptidase PmbA [Vibrio cholerae O395]
gi|227118974|ref|YP_002820870.1| pmbA protein [Vibrio cholerae O395]
gi|262167562|ref|ZP_06035267.1| PmbA protein [Vibrio cholerae RC27]
gi|146315125|gb|ABQ19664.1| pmbA protein [Vibrio cholerae O395]
gi|227014424|gb|ACP10634.1| pmbA protein [Vibrio cholerae O395]
gi|262024015|gb|EEY42711.1| PmbA protein [Vibrio cholerae RC27]
Length = 447
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 167/428 (39%), Positives = 263/428 (61%), Gaps = 17/428 (3%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + + G SV R +++ +E N+D + + +Y + G++STSD +K++
Sbjct: 32 AEVAITKSTGLSVSTRMCEVENVEFNSDGALGITVY----RGQRKGSASTSDLSEKAIRQ 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IA++T++D +AG + + + D L+ P + D A IA E A +
Sbjct: 88 TVLAALDIAQYTSADPYAGPAPKELMVQDIPDLDLFHPDEPNPDVAAQIAIAAERAALGY 147
Query: 157 NSLIVNNENTGVTTQQSHF---LLANSHGFMSGYPFSKHIISISPIAIKGK--EMQRDNW 211
+ I ++ + SHF + NSHG ++ Y S+H IS S I +G+ EM+RD
Sbjct: 148 SKKIKQSDGG---SYDSHFGIRVYGNSHGVLASYASSRHSISCSVIG-EGRNGEMERDYS 203
Query: 212 YSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISG 271
Y+ L PE +G AA+ T+SRL +K+ T + PV+F A +A L+ ISG
Sbjct: 204 YTVARHRDDLWTPESVGLQAAENTVSRLDPQKLKTGQFPVMFAADVATGLIGHLVMAISG 263
Query: 272 NSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQG 331
+LYRKS+FL+D LGK I + I E PH++ SS FD+EGV+TQ ++ +G++
Sbjct: 264 GNLYRKSSFLLDHLGKTILPTWFNISERPHVMRGLASSPFDSEGVRTQDLEIITDGVLAT 323
Query: 332 YFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGIN 391
Y L++Y+A+K+ M TG++GG H+ + S + N ++MLK++ TGLLVTE+MG G+N
Sbjct: 324 YLLTSYAARKMNMTPTGHAGGIHNWYVKS----TGQNYQQMLKELGTGLLVTEVMGQGVN 379
Query: 392 YITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILI 451
+TGDYS+GA G+W+ENG+I+Y V EITI+G L+ M +QIVA+GSD+ TR+ +GSILI
Sbjct: 380 VVTGDYSRGAAGFWVENGEIKYPVSEITIAGNLKQMLQQIVAVGSDIETRSQIQTGSILI 439
Query: 452 ENMIIAGK 459
E+M +AG+
Sbjct: 440 ESMKVAGE 447
>gi|349587900|pdb|3TV9|A Chain A, Crystal Structure Of Putative Peptide Maturation Protein
From Shigella Flexneri
Length = 457
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 163/448 (36%), Positives = 271/448 (60%), Gaps = 11/448 (2%)
Query: 12 IYSKSEFQQLAQDMLNYAKKIGASHS---SIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
+Y +S +++ ++ ++ A ++ + S + ++ G SV R G+++ +E N+D +
Sbjct: 18 LYFQSNARKILEEAVSTALELASGKSDGAEVAVSKTTGISVSTRYGEVENVEFNSDGALG 77
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
+ +Y Q+ K G++S++D +++ T+ AA +IAR+T+ D AG+ D+ L + +
Sbjct: 78 ITVYHQNRK----GSASSTDLSPQAIARTVQAALDIARYTSPDPCAGVADKELLAFDAPN 133
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
L+ P +S D+A +A R E A + I N E + + NSHG + GY
Sbjct: 134 LDLFHPAEVSPDEAIELAARAEQAALQADKRITNTEGGSFNSHYGVKVFGNSHGXLQGYC 193
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
++H + IA + + +RD Y+ L PE +G A+RT+SRL +K+ST K
Sbjct: 194 STRHSLFSCVIAEENGDXERDYAYTIGRAXSDLQTPEWVGADCARRTLSRLSPRKLSTXK 253
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
PV+F +A L I+G S+YRKSTFL+DSLGK+I + I E PH+L S
Sbjct: 254 APVIFANEVATGLFGHLVGAIAGGSVYRKSTFLLDSLGKQILPDWLTIEEHPHLLKGLAS 313
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
+ FD+EGV+T++R ++K+GI+ + L++YSA+KLG+K+TG++GG H+ I +
Sbjct: 314 TPFDSEGVRTERRDIIKDGILTQWLLTSYSARKLGLKSTGHAGGIHNWRIAGQGL----S 369
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
++ LK+ TGL+VTEL G G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L++ +
Sbjct: 370 FEQXLKEXGTGLVVTELXGQGVSAITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDXW 429
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMII 456
+ IV +G+D+ TR++ GS+L+ I
Sbjct: 430 RNIVTVGNDIETRSNIQCGSVLLPEXKI 457
>gi|145641256|ref|ZP_01796836.1| anaerobic ribonucleotide reductase-activating protein [Haemophilus
influenzae R3021]
gi|145274093|gb|EDK13959.1| anaerobic ribonucleotide reductase-activating protein [Haemophilus
influenzae 22.4-21]
Length = 451
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/444 (38%), Positives = 270/444 (60%), Gaps = 8/444 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + A K GAS + + + +G SV R +++ +E ND + + +Y+
Sbjct: 15 EQELRQAVSFAVALATKAGAS-AEVAVTKVSGLSVSARLQEVENVEFTNDGALGISVYMG 73
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K GN+STSD + ++ + + AA IA++T+ D+ GL D++ + N D +LY
Sbjct: 74 QQK----GNASTSDLSESAIKNAVEAALAIAKYTSPDDCTGLADKDLMAFNAPDLELYHA 129
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+ +D A +A + E A + I+N+ + + NSHG + Y S++ +
Sbjct: 130 ADVDVDKATELALQAEKAALEADERIINSNGASFNSHTGVKVYGNSHGMLQSYLSSRYSL 189
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S I ++ D Y+ + + KL P +G AK+ +SRL +K+STR+ PV+F
Sbjct: 190 SCSVIGGVEDALENDYEYTISREFDKLQSPIWVGKNCAKKVVSRLNPQKLSTREVPVIFL 249
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L++ F ISG SLYRKS+FL+D LGK++ I E PH+L S+ FD+E
Sbjct: 250 NDVATGLISHFTAAISGGSLYRKSSFLLDYLGKQVLPDWFNISERPHLLRRLASTPFDSE 309
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+TQ R +V+NGI+Q Y +++YS KKLGM +TG++GG H+ ++ N T L +L+
Sbjct: 310 GVRTQDREIVENGILQTYLVTSYSGKKLGMPSTGHAGGIHNWLVKPNLTG---GLTALLR 366
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+LQ+M K ++A+
Sbjct: 367 QMGTGLLVTDVMGQGVNIVTGDYSRGASGFWVENGEIQYPVAEITIAGQLQDMLKNMLAV 426
Query: 435 GSDVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GSIL++ M I+G
Sbjct: 427 ADDIEHRSNIQTGSILLDKMKISG 450
>gi|333894853|ref|YP_004468728.1| pmbA protein [Alteromonas sp. SN2]
gi|332994871|gb|AEF04926.1| pmbA protein [Alteromonas sp. SN2]
Length = 443
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 175/443 (39%), Positives = 254/443 (57%), Gaps = 8/443 (1%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
SE Q + D+L A K GA+ + ++ G +V R +++ +E ND + + +Y+
Sbjct: 8 SEIQNVVDDVLKLALKNGATQAEASMSKVEGIAVSSRMQEVENVEFTNDGGLGISVYV-- 65
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
GK+ G++ST+D K++L + A +IA++T+ D GL D + D LY P
Sbjct: 66 GKRK--GSASTADLNKEALTRAVEKAVDIAKYTSEDPCTGLADAELMATEFPDLDLYHPQ 123
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
L + A E+ A ++ I N++ + N+HG +GYP S++ +S
Sbjct: 124 ELDTEKAIATTIEAESAALGYDPRITNSDGASYNANLGMRVYGNTHGINAGYPSSRYSLS 183
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
I + +MQRD Y+ + L IG AAK T+ RL A+KI+T + P+L
Sbjct: 184 CMVIGSQDGDMQRDYAYTVDRQAPLLQSAVSIGQEAAKATVERLGARKINTAQVPILLHK 243
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A L + ISG SLYR+S+FL+DSLGK+IF + I E P I SSSFDNEG
Sbjct: 244 DIASSLFGHYVGAISGGSLYRRSSFLLDSLGKQIFPEWLNIEERPFIKSGLASSSFDNEG 303
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
V + +V G + Y +TYSA+KL +T G++GG H+ ++ T SD+ ++LK+
Sbjct: 304 VACKDMTIVDGGKLSTYLYTTYSARKLNTQTNGHAGGIHNWLV--GDTGHSDS--DLLKE 359
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
M TGL VTELMG G+N +TGDYS+GA G+W+ENG IQY V E+TI+G LQ+MF IVAIG
Sbjct: 360 MGTGLYVTELMGQGVNTVTGDYSRGAAGFWVENGVIQYPVHEVTIAGCLQDMFAGIVAIG 419
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
D R S +GSILI M IAG
Sbjct: 420 KDKDLRGSVHTGSILINQMKIAG 442
>gi|258625799|ref|ZP_05720678.1| Protein pmbA [Vibrio mimicus VM603]
gi|258582037|gb|EEW06907.1| Protein pmbA [Vibrio mimicus VM603]
Length = 447
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 167/426 (39%), Positives = 261/426 (61%), Gaps = 13/426 (3%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + + G SV R +++ +E N+D + + +Y + G++STSD +K++
Sbjct: 32 AEVAITKSTGLSVSTRMCEVENVEFNSDGALGITVY----RGQRKGSASTSDLSEKAIQQ 87
Query: 97 TINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFN 155
T+ AA +IA++T+ D +AG P E ++ P D L+ P + D A IA E A
Sbjct: 88 TVLAALDIAQYTSEDPYAGPAPKELMVQEIP-DLDLFHPDEPNPDVAAQIAIAAERAALG 146
Query: 156 FNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK--EMQRDNWYS 213
++ I ++ + + NSHG ++ Y S+H IS S I +G+ EM+RD Y+
Sbjct: 147 YSKKIKQSDGGSYDSHYGVRVYGNSHGLLASYASSRHSISCSVIG-EGRNGEMERDYSYT 205
Query: 214 SNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNS 273
L PE +G AA+ T+SRL +K+ T + PV+F A +A L+ ISG +
Sbjct: 206 VARHRDDLWTPESVGLQAAENTVSRLDPQKLKTGQFPVMFAADVATGLIGHLVMAISGGN 265
Query: 274 LYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYF 333
LYRKS+FL+D LGK I + I E PH++ SS FD+EGV+TQ ++ +G++ Y
Sbjct: 266 LYRKSSFLLDHLGKSILPTWFNISERPHVMRGLASSPFDSEGVRTQDLEIITDGVLATYL 325
Query: 334 LSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYI 393
L++Y+A+K+ M TG++GG H+ + S + N ++MLK++ TGLLVTE+MG G+N +
Sbjct: 326 LTSYAARKMNMTPTGHAGGIHNWYVKS----TGQNYQQMLKELGTGLLVTEVMGQGVNVV 381
Query: 394 TGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIEN 453
TGDYS+GA G+W+ENG+I+Y V EITI+G L+ M +QIVA+GSD+ TR+ +GSILIE+
Sbjct: 382 TGDYSRGAAGFWVENGEIKYPVSEITIAGNLKQMLQQIVAVGSDIETRSQIQTGSILIES 441
Query: 454 MIIAGK 459
M +AG+
Sbjct: 442 MKVAGE 447
>gi|229527532|ref|ZP_04416924.1| PmbA protein [Vibrio cholerae 12129(1)]
gi|384425467|ref|YP_005634825.1| TldE/PmbA protein [Vibrio cholerae LMA3984-4]
gi|229335164|gb|EEO00649.1| PmbA protein [Vibrio cholerae 12129(1)]
gi|327485020|gb|AEA79427.1| TldE/PmbA protein [Vibrio cholerae LMA3984-4]
Length = 447
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 164/425 (38%), Positives = 260/425 (61%), Gaps = 11/425 (2%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + + G SV R +++ +E N+D + + +Y + G++STSD +K++
Sbjct: 32 AEVAITKSTGLSVSTRMCEVENVEFNSDGALGITVY----RGQRKGSASTSDLSEKAIRQ 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IA++T++D +AG + + + D L+ P + D A IA E A +
Sbjct: 88 TVLAALDIAQYTSADPYAGPAPKELMVQDIPDLDLFHPDEPNPDVAAQIAIAAERAALGY 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK--EMQRDNWYSS 214
+ I ++ + + NSHG ++ Y S+H IS S I +G+ EM+RD Y+
Sbjct: 148 SKKIKQSDGGSYDSHYGIRVYGNSHGLLASYASSRHSISCSVIG-EGRNGEMERDYSYTV 206
Query: 215 NSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSL 274
L PE +G AA+ T+SRL +K+ T + PV+F A +A L+ ISG +L
Sbjct: 207 ARHRDDLWTPESVGLQAAENTVSRLDPQKLKTGQFPVMFVADVATGLIGHLVMAISGGNL 266
Query: 275 YRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFL 334
YRKS+FL+D LGK I + I E PH++ SS FD+EGV+TQ ++ +G++ Y L
Sbjct: 267 YRKSSFLLDHLGKTILPTWFNISERPHVMRGLASSPFDSEGVRTQDLEIITDGVLATYLL 326
Query: 335 STYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYIT 394
++Y+A+K+ M TG++GG H+ + S + N ++MLK++ TGLLVTE+MG G+N +T
Sbjct: 327 TSYAARKMNMTPTGHAGGIHNWYVKS----TGQNYQQMLKELGTGLLVTEVMGQGVNVVT 382
Query: 395 GDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENM 454
GDYS+GA G+W+ENG+I+Y V EITI+G L+ M +QIVA+GSD+ TR+ +GSILIE+M
Sbjct: 383 GDYSRGAAGFWVENGEIKYPVSEITIAGNLKQMLQQIVAVGSDIETRSQIQTGSILIESM 442
Query: 455 IIAGK 459
+AG+
Sbjct: 443 KVAGE 447
>gi|262401824|ref|ZP_06078389.1| PmbA protein [Vibrio sp. RC586]
gi|262351796|gb|EEZ00927.1| PmbA protein [Vibrio sp. RC586]
Length = 447
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 164/425 (38%), Positives = 259/425 (60%), Gaps = 11/425 (2%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + + G SV R +++ +E N+D + + +Y + G++STSD +K++
Sbjct: 32 AEVAITKSTGLSVSTRMCEVENVEFNSDGALGITVY----RGQRKGSASTSDLSEKAIQQ 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IA++T+ D +AG + + + D L+ P + D A IA E A +
Sbjct: 88 TVLAALDIAQYTSEDPYAGPAPKELMVQDIPDLDLFHPDEPNPDVAAQIAIAAERAALGY 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK--EMQRDNWYSS 214
+ I ++ + + NSHG ++ Y S+H IS S I +G+ EM+RD Y+
Sbjct: 148 SKKIKQSDGGSYDSHYGIRVYGNSHGLLASYASSRHSISCSVIG-EGRNGEMERDYSYTV 206
Query: 215 NSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSL 274
L PE +G AA+ T+SRL +K+ T + PV+F A +A L+ ISG +L
Sbjct: 207 ARHRDDLWTPERVGLLAAENTVSRLDPQKLKTGQFPVMFAADVATGLIGHLVMAISGGNL 266
Query: 275 YRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFL 334
YRKS+FL+D LGK I + I E PH++ SS FD+EGV+TQ ++ +G++ Y L
Sbjct: 267 YRKSSFLLDHLGKTILPTWFNISERPHVMRGLASSPFDSEGVRTQDLEIITDGVLATYLL 326
Query: 335 STYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYIT 394
++Y+A+K+ M TG++GG H+ + S + N ++MLK++ TGLLVTE+MG G+N +T
Sbjct: 327 TSYAARKMNMTPTGHAGGIHNWYVKS----TGQNYQQMLKELGTGLLVTEVMGQGVNVVT 382
Query: 395 GDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENM 454
GDYS+GA G+W+ENG+I+Y V EITI+G L+ M +QIVA+GSD+ TR+ +GSILIE+M
Sbjct: 383 GDYSRGAAGFWVENGEIKYPVSEITIAGNLKQMLQQIVAVGSDIETRSQIQTGSILIESM 442
Query: 455 IIAGK 459
+AG+
Sbjct: 443 KVAGE 447
>gi|262166562|ref|ZP_06034299.1| PmbA protein [Vibrio mimicus VM223]
gi|262026278|gb|EEY44946.1| PmbA protein [Vibrio mimicus VM223]
Length = 447
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 167/426 (39%), Positives = 261/426 (61%), Gaps = 13/426 (3%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + + G SV R +++ +E N+D + + +Y + G++STSD +K++
Sbjct: 32 AEVAITKSTGLSVSTRMCEVENVEFNSDGALGITVY----RGQRKGSASTSDLSEKAIQQ 87
Query: 97 TINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFN 155
T+ AA +IA++T+ D +AG P E ++ P D L+ P + D A IA E A
Sbjct: 88 TVLAALDIAQYTSEDPYAGPAPKELMVQEIP-DLDLFHPDEPNPDVAAQIAIAAERAALG 146
Query: 156 FNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK--EMQRDNWYS 213
++ I ++ + + NSHG ++ Y S+H IS S I +G+ EM+RD Y+
Sbjct: 147 YSKKIKQSDGGSYDSHYGVRVYGNSHGLLASYASSRHSISCSVIG-EGRNGEMERDYSYT 205
Query: 214 SNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNS 273
L PE +G AA+ T+SRL +K+ T + PV+F A +A L+ ISG +
Sbjct: 206 VARHRDDLWTPESVGLQAAENTVSRLDPQKLKTGQFPVMFAADVATGLIGHLVMAISGGN 265
Query: 274 LYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYF 333
LYRKS+FL+D LGK I + I E PH++ SS FD+EGV+TQ ++ +G++ Y
Sbjct: 266 LYRKSSFLLDHLGKTILPTWFNISERPHVMRGLASSPFDSEGVRTQDLEIITDGVLATYL 325
Query: 334 LSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYI 393
L++Y+A+K+ M TG++GG H+ + S + N ++MLK++ TGLLVTE+MG G+N +
Sbjct: 326 LTSYAARKMNMTPTGHAGGIHNWYVKS----TGQNYQQMLKELGTGLLVTEVMGQGVNVV 381
Query: 394 TGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIEN 453
TGDYS+GA G+W+ENG+I+Y V EITI+G L+ M +QIVA+GSD+ TR+ +GSILIE+
Sbjct: 382 TGDYSRGAAGFWVENGEIKYPVSEITIAGNLKQMLQQIVAVGSDIETRSQIQTGSILIES 441
Query: 454 MIIAGK 459
M +AG+
Sbjct: 442 MKVAGE 447
>gi|254507452|ref|ZP_05119587.1| PmbA protein [Vibrio parahaemolyticus 16]
gi|219549708|gb|EED26698.1| PmbA protein [Vibrio parahaemolyticus 16]
Length = 447
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 171/460 (37%), Positives = 273/460 (59%), Gaps = 19/460 (4%)
Query: 2 EQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQ 61
EQ+++ R + + ++ ++A + K GA + + G SV R +++ +E
Sbjct: 5 EQVVQQRVELEAAVAKALEMAAE-----KSDGAE---VAITKTTGLSVSTRMCEVENVEF 56
Query: 62 NNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAG-LPDEN 120
N+D + + +Y + G++STSD +K++ T+ AA +IA++T+ D +AG P E
Sbjct: 57 NSDGALGITVY----RGQRKGSASTSDLSEKAIQQTVLAALDIAQYTSEDPYAGPAPKEL 112
Query: 121 TLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANS 180
++ P D L+ P D A +A E A ++ I ++ + + NS
Sbjct: 113 MVKEIP-DLDLFHPDTPDPDYAAQVAIAAEKAALEYSDKIKQSDGASYDSHYGLKVYGNS 171
Query: 181 HGFMSGYPFSKHIISISPIAIKGK-EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRL 239
HG ++ Y S+H S I EM+RD Y+ + L PE +G AA++TISRL
Sbjct: 172 HGLLASYASSRHSTSCCVIGQGANGEMERDYDYTLSRHKDDLWSPEAVGLKAAEKTISRL 231
Query: 240 KAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIED 299
A+K+ T + P++F A +A L+ ISG +LYRKS+FL+D LG+K+ I E
Sbjct: 232 DAQKLRTGQYPIMFAADVATGLIGHLVMAISGGNLYRKSSFLLDQLGEKVLPDWFNIAEK 291
Query: 300 PHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIII 359
PH+L SS FD+EGV TQ R ++ +G++ Y L++Y+A+K+ M TG++GG H+ +
Sbjct: 292 PHVLRGLASSPFDSEGVFTQDREIITDGVLATYLLTSYAARKMDMTPTGHAGGIHNWYVQ 351
Query: 360 SNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEIT 419
S + N ++MLK++ TGLLVTE MG G+N +TGDYS+GA G+W+ENG++QY V EIT
Sbjct: 352 S----TGQNFEQMLKELGTGLLVTETMGQGVNIVTGDYSRGAAGFWVENGQVQYPVSEIT 407
Query: 420 ISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
I+G L+ MF+ IVA+G+DV TR+ +GSIL+E+M +AG+
Sbjct: 408 IAGNLKQMFQNIVAVGNDVETRSQIQTGSILLESMKVAGE 447
>gi|148977780|ref|ZP_01814336.1| peptidase PmbA [Vibrionales bacterium SWAT-3]
gi|145962994|gb|EDK28264.1| peptidase PmbA [Vibrionales bacterium SWAT-3]
Length = 447
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 170/451 (37%), Positives = 268/451 (59%), Gaps = 18/451 (3%)
Query: 19 QQLAQDMLNYAKKIG---------ASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNV 69
QQ+AQ ++ + A + + + G SV R +++ +E N+D + +
Sbjct: 5 QQVAQQRVDLEAAVAKALDMASVSADAAEVAITKSTGLSVSTRMCEVENVEFNSDGALGI 64
Query: 70 IIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDF 129
+Y G+K G++STSD +K++ T+ AA +IA++T+ D FAG + + D
Sbjct: 65 TVY--RGQKK--GSASTSDLSEKAIAQTVAAALDIAQYTSEDPFAGPAAKEYMVKEIPDL 120
Query: 130 KLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPF 189
L+ P + D A +A E +A ++ I ++ + + NSHG ++ Y
Sbjct: 121 DLFHPDEPNPDYAAELAIAAEKQALAYSDKIKQSDGASYDSHYGVKVYGNSHGLLASYAS 180
Query: 190 SKHIISISPIAIKGK-EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
S+H S I EM+RD Y+ +L PE +G AA++TISRL AKK++T +
Sbjct: 181 SRHSTSCCVIGQGANGEMERDYSYTVARHRDELWTPERVGQEAAEKTISRLDAKKLATGQ 240
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
P++F +A L+ ISG +LYRK++FL+D LG+KI I E PHIL S
Sbjct: 241 YPIMFANDVATGLIGHLVMAISGGNLYRKASFLLDHLGQKILPDWFNISERPHILRGLAS 300
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
S FD+EGV TQ R ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S + N
Sbjct: 301 SPFDSEGVFTQDREIITDGVLATYLLTSYAARKMDMTPTGHAGGIHNWFVKS----TGQN 356
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
++MLK++ TG LVTE+MG G+N +TGDYS+GA G+W+ENG+IQY V E+TI+G L++MF
Sbjct: 357 FEQMLKELGTGFLVTEVMGQGVNTVTGDYSRGAAGFWVENGEIQYPVSEVTIAGNLKDMF 416
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
QIVA+G+DV TR+ +GSIL+E+M +AG+
Sbjct: 417 NQIVAVGNDVETRSQIQTGSILLESMKVAGE 447
>gi|342904541|ref|ZP_08726340.1| Protein pmbA [Haemophilus haemolyticus M21621]
gi|341952962|gb|EGT79476.1| Protein pmbA [Haemophilus haemolyticus M21621]
Length = 451
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 170/457 (37%), Positives = 278/457 (60%), Gaps = 9/457 (1%)
Query: 3 QLIKNRSKFIYSKS-EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQ 61
++ +N++ + ++ E +Q + A K GAS + + + +G SV R +I+ +E
Sbjct: 2 KIAENQTALLKAQEQELRQAVSFAVELATKSGAS-AEVAVTKVSGLSVSTRLQEIENVEF 60
Query: 62 NNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENT 121
ND + + +Y+ K GN+STSD + ++ + + AA IA++T+ D+ GL D++
Sbjct: 61 TNDGALGISVYMGQQK----GNASTSDLSEGAIRNAVEAALAIAKYTSPDDCTGLADKDL 116
Query: 122 LEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSH 181
+ + D +LY + +D A +A + E A + I+N+ + + NSH
Sbjct: 117 MAFDAPDLELYHAADVDVDKATELALQAEKAALEADEHIINSNGASFNSHTGVKVYGNSH 176
Query: 182 GFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKA 241
G + Y S++ +S S I ++ D Y+ + + KL P +G AK+ +SRL
Sbjct: 177 GMLQSYLSSRYSLSCSVIGGGEDALENDYEYTISREFDKLQSPIWVGENCAKKVVSRLNP 236
Query: 242 KKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPH 301
+K+STR+ PV+F +A L++ FA ISG SLYRKS+FL+D LGK++ I E PH
Sbjct: 237 QKLSTREVPVIFLNDVATGLISHFAAAISGGSLYRKSSFLLDHLGKQVLPDWFNISERPH 296
Query: 302 ILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISN 361
+L S+ FD+EGV+TQ R +V+ GI+Q Y +++YS KKLGM +TG++GG H+ ++
Sbjct: 297 LLRRLASTPFDSEGVRTQDREIVEGGILQTYLVTSYSGKKLGMPSTGHAGGIHNWLV--- 353
Query: 362 KTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITIS 421
K + L +L++M TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+
Sbjct: 354 KPNLAGGLTALLRQMGTGLLVTDVMGQGVNIVTGDYSRGASGFWVENGEIQYPVAEITIA 413
Query: 422 GKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
G+LQ+M K +VA+ D+ R++ +GSIL++ M I+G
Sbjct: 414 GQLQDMLKNMVAVADDIEHRSNIQTGSILLDKMKISG 450
>gi|262170525|ref|ZP_06038203.1| PmbA protein [Vibrio mimicus MB-451]
gi|261891601|gb|EEY37587.1| PmbA protein [Vibrio mimicus MB-451]
Length = 447
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 164/425 (38%), Positives = 259/425 (60%), Gaps = 11/425 (2%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + + G SV R +++ +E N+D + + +Y + G++STSD +K++
Sbjct: 32 AEVAITKSTGLSVSTRMCEVENVEFNSDGALGITVY----RGQRKGSASTSDLSEKAIQQ 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IA++T+ D +AG + + + D L+ P + D A IA E A +
Sbjct: 88 TVLAALDIAQYTSEDPYAGPAPKELMVQDIPDLDLFHPDEPNPDVAAQIAIAAERAALGY 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK--EMQRDNWYSS 214
+ I ++ + + NSHG ++ Y S+H IS S I +G+ EM+RD Y+
Sbjct: 148 SKKIKQSDGGSYDSHYGVRVYGNSHGLLASYASSRHSISCSVIG-EGRNGEMERDYSYTV 206
Query: 215 NSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSL 274
L PE +G AA+ T+SRL +K+ T + PV+F A +A L+ ISG +L
Sbjct: 207 ARHRGDLWTPESVGLQAAENTVSRLDPQKLKTGQFPVMFAADVATGLIGHLVMAISGGNL 266
Query: 275 YRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFL 334
YRKS+FL+D LGK I + I E PH++ SS FD+EGV+TQ ++ +G++ Y L
Sbjct: 267 YRKSSFLLDHLGKTILPTWFNISERPHVMRGLASSPFDSEGVRTQDLEIITDGVLATYLL 326
Query: 335 STYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYIT 394
++Y+A+K+ M TG++GG H+ + S + N ++MLK++ TGLLVTE+MG G+N +T
Sbjct: 327 TSYAARKMNMTPTGHAGGIHNWYVKS----TGQNYQQMLKELGTGLLVTEVMGQGVNVVT 382
Query: 395 GDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENM 454
GDYS+GA G+W+ENG+I+Y V EITI+G L+ M +QIVA+GSD+ TR+ +GSILIE+M
Sbjct: 383 GDYSRGAAGFWVENGEIKYPVSEITIAGNLKQMLQQIVAVGSDIETRSQIQTGSILIESM 442
Query: 455 IIAGK 459
+AG+
Sbjct: 443 KVAGE 447
>gi|89075272|ref|ZP_01161699.1| putative pmbA protein [Photobacterium sp. SKA34]
gi|89048953|gb|EAR54521.1| putative pmbA protein [Photobacterium sp. SKA34]
Length = 447
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 174/454 (38%), Positives = 275/454 (60%), Gaps = 12/454 (2%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
R + + E + L A K A + + N+ G SV R ++ +E N+D +
Sbjct: 4 REQVAQQRVELEAAVAKALEVAGK-QADAAEVAINKTTGISVSTRMCDVENVEFNSDGAL 62
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
+ +Y + K G++STSD + ++ T+ AA +IA +T+ D FAG + + +
Sbjct: 63 GITVYRGNRK----GSASTSDLSESAIAQTVAAALDIANYTSEDPFAGPGPKELMARDIP 118
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ P D A IA E A ++ I ++ + + NSHG ++ Y
Sbjct: 119 DLDLFHPDEPEPDRAAAIAIAAEEAALAYDPRIKQSDGASYDSHYGVRVYGNSHGMLASY 178
Query: 188 PFSKHIISISPIAIKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
S+H IS IA +GK EM+RD Y+++ + PE +G +AA+RT+ R+ A+K++
Sbjct: 179 ASSRHSISCCVIA-EGKNGEMERDYSYTTSRLASDMWTPEHVGRHAAERTVGRVDAQKLT 237
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
TR+ PV+F A +A L ISG +LYRKS+FLVD LG++IF + I E PHIL
Sbjct: 238 TREAPVMFAADVATGLFGHLVMGISGANLYRKSSFLVDKLGEQIFPEWLGISERPHILRG 297
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
S+ FD+EG+ T R ++ +G++Q Y L++Y+A+K+ M+ TG++GG H+ ++ S +
Sbjct: 298 MASTPFDSEGLATYDREIITDGVLQTYLLTSYAARKMNMQPTGHAGGIHNWMVKS----T 353
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
++ ++MLKKM+ GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L+
Sbjct: 354 GESFEQMLKKMDRGLLVTELMGQGVNIVTGDYSRGAAGFWVENGQIQYPVSEITIAGNLK 413
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+M + IVAIG+D TR+ +GS+L+++M IAG+
Sbjct: 414 DMMQNIVAIGNDTETRSQILTGSMLLDSMKIAGE 447
>gi|451966722|ref|ZP_21919973.1| PmbA protein [Edwardsiella tarda NBRC 105688]
gi|451314394|dbj|GAC65335.1| PmbA protein [Edwardsiella tarda NBRC 105688]
Length = 446
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 157/415 (37%), Positives = 256/415 (61%), Gaps = 8/415 (1%)
Query: 45 NGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNI 104
G SV R G+++ +E N+D + + +Y Q K G++S++D +++ T+ AA +I
Sbjct: 40 TGISVSTRFGEVENVEFNSDGALGITVYHQQRK----GSASSTDLSPQAIARTVQAALDI 95
Query: 105 ARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNE 164
AR+T+ D +AG + L D L+ P L D A +A E A + ++ I N E
Sbjct: 96 ARYTSPDPYAGPAEAALLAFEAPDLDLFHPAELDADRAIALAAEAERVALSADARISNTE 155
Query: 165 NTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQP 224
+ + NSHG + Y S+H +S IA + +M+RD Y+ D +L
Sbjct: 156 GGSFNSHYGIRVFGNSHGMLQSYCSSRHSLSSCVIAEQEGDMERDYAYTIARDMAELRSA 215
Query: 225 EIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDS 284
+ +G A+RT++RL +++ T + PV+F A +A L ISG+S+YRKSTFL+DS
Sbjct: 216 QWVGEECARRTLARLAPRRLPTMQAPVMFAAEVATGLFGHLVGAISGSSVYRKSTFLLDS 275
Query: 285 LGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGM 344
LG++I + + I E PH+L S+ FD+EGV+T R +V++G++Q + L++YSA+KLG+
Sbjct: 276 LGQQILPAWLTIEEQPHLLRGLASTPFDSEGVRTTPRHIVQDGVLQTWLLTSYSARKLGL 335
Query: 345 KTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGY 404
+TG++GG H+ I + ++M+++M G LVTELMG G++ +TGDYS+GA G+
Sbjct: 336 HSTGHAGGIHNWRIAGRGL----DFQQMVREMGRGFLVTELMGQGVSTVTGDYSRGASGF 391
Query: 405 WIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
W+ENG+IQY V E+TI+G L++M+ +V IG D+ TR++ GS+L+++M IAG+
Sbjct: 392 WVENGEIQYPVSEVTIAGNLRDMWANMVTIGDDIETRSNIQCGSVLLDSMKIAGE 446
>gi|68249701|ref|YP_248813.1| hypothetical protein NTHI1320 [Haemophilus influenzae 86-028NP]
gi|229846183|ref|ZP_04466295.1| PmbA [Haemophilus influenzae 7P49H1]
gi|386266145|ref|YP_005829637.1| Protease PmbA [Haemophilus influenzae R2846]
gi|68057900|gb|AAX88153.1| PmbA [Haemophilus influenzae 86-028NP]
gi|229811187|gb|EEP46904.1| PmbA [Haemophilus influenzae 7P49H1]
gi|309973381|gb|ADO96582.1| Protease PmbA [Haemophilus influenzae R2846]
Length = 451
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 269/444 (60%), Gaps = 8/444 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + A K GAS + + + +G SV R +I+ +E ND + + +Y+
Sbjct: 15 EQELRQAVSFAVALATKAGAS-AEVAVTKVSGLSVSARLQEIENVEFTNDGALGISVYMG 73
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K GN+STSD + ++ + + AA IA++T+ D+ GL D++ + + D +LY
Sbjct: 74 QQK----GNASTSDLSESAIKNAVEAALAIAKYTSPDDCTGLADKDLMAFDAPDLELYHA 129
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+ +D A +A + E A + I+N+ + + NSHG + Y S++ +
Sbjct: 130 ADVDVDKATELALQAEKAALEADERIINSNGASFNSHTGVKVYGNSHGMLQSYLSSRYSL 189
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S I ++ D Y+ + + KL P +G AK+ +SRL +K+STR+ PV+F
Sbjct: 190 SCSVIGGVEAALENDYEYTISREFDKLQSPIWVGENCAKKVVSRLNPQKLSTREVPVIFL 249
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L++ FA ISG SLYRKS+FL+D LGK++ I E PH+L S+ FD+E
Sbjct: 250 NDVATGLISHFAAAISGGSLYRKSSFLLDHLGKQVLPDWFNISERPHLLRRLASTPFDSE 309
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+TQ R +V+ GI+Q Y +++YS KKLGM +TG++GG H+ ++ N T L +L
Sbjct: 310 GVRTQDREIVEGGILQTYLVTSYSGKKLGMPSTGHAGGIHNWLVKPNLTG---GLTALLH 366
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+LQ+M K +VA+
Sbjct: 367 QMGTGLLVTDVMGQGVNIVTGDYSRGASGFWVENGEIQYPVAEITIAGQLQDMLKNMVAV 426
Query: 435 GSDVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GSIL++ M I+G
Sbjct: 427 ADDIEHRSNIQTGSILLDKMKISG 450
>gi|261211095|ref|ZP_05925384.1| PmbA protein [Vibrio sp. RC341]
gi|260839596|gb|EEX66207.1| PmbA protein [Vibrio sp. RC341]
Length = 447
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/417 (39%), Positives = 256/417 (61%), Gaps = 11/417 (2%)
Query: 45 NGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNI 104
G SV R +++ +E N+D + + +Y + G++STSD +K++ T+ AA +I
Sbjct: 40 TGLSVSTRMCEVENVEFNSDGALGITVY----RGQRKGSASTSDLSEKAIQQTVLAALDI 95
Query: 105 ARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNE 164
A++T+ D +AG + + + D L+ P + D A IA E A ++ I ++
Sbjct: 96 AQYTSEDPYAGPAPKELMVQDIPDLDLFHPDEPNPDVAAQIAIAAERAALGYSKKIKQSD 155
Query: 165 NTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK--EMQRDNWYSSNSDPKKLD 222
+ + NSHG ++ Y S+H IS S I +G+ EM+RD Y+ L
Sbjct: 156 GGSYDSHYGIRVYGNSHGLLASYASSRHSISCSVIG-EGRNGEMERDYSYTVARHRDDLW 214
Query: 223 QPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLV 282
PE +G AA+ T+SRL +K+ T + PV+F A +A L+ ISG +LYRKS+FL+
Sbjct: 215 TPESVGLQAAENTVSRLDPQKLKTGQFPVMFAADVATGLIGHLVMAISGGNLYRKSSFLL 274
Query: 283 DSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKL 342
D LGK I + I E PH++ SS FD+EGV+TQ ++ +G++ Y L++Y+A+K+
Sbjct: 275 DHLGKTILPTWFNISERPHVMRGLASSPFDSEGVRTQDLEIITDGVLATYLLTSYAARKM 334
Query: 343 GMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAF 402
M TG++GG H+ + S + N ++MLK++ TGLLVTE+MG G+N +TGDYS+GA
Sbjct: 335 SMTPTGHAGGIHNWYVKS----TGQNYQQMLKELGTGLLVTEVMGQGVNVVTGDYSRGAA 390
Query: 403 GYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
G+W+ENG+I+Y V EITI+G L+ M +QIVA+GSDV TR+ +GSILIE+M +AG+
Sbjct: 391 GFWVENGEIKYPVSEITIAGNLKQMLQQIVAVGSDVETRSQIQTGSILIESMKVAGE 447
>gi|297581380|ref|ZP_06943303.1| pmbA protein [Vibrio cholerae RC385]
gi|297534218|gb|EFH73056.1| pmbA protein [Vibrio cholerae RC385]
Length = 447
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 164/425 (38%), Positives = 259/425 (60%), Gaps = 11/425 (2%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + + G SV R +++ +E N+D + + +Y + G++STSD +K++
Sbjct: 32 AEVAITKSTGLSVSTRMCEVENVEFNSDGALGITVY----RGQRKGSASTSDLSEKAIQQ 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IA++T+ D +AG + + + D L+ P + D A IA E A +
Sbjct: 88 TVLAALDIAQYTSEDPYAGPAPKELMVKDIPDLDLFHPDEPNPDVAAQIAIAAERAALGY 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK--EMQRDNWYSS 214
+ I ++ + + NSHG ++ Y S+H IS S I +G+ EM+RD Y+
Sbjct: 148 SKKIKQSDGGSYDSHYGIRVYGNSHGLLASYASSRHSISCSVIG-EGRNGEMERDYSYTV 206
Query: 215 NSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSL 274
L PE +G AA+ T+SRL +K+ T + PV+F A +A L+ ISG +L
Sbjct: 207 ARHRDDLWTPESVGLQAAENTVSRLDPQKLKTGQFPVMFAADVATGLIGHLVMAISGGNL 266
Query: 275 YRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFL 334
YRKS+FL+D LGK I + I E PH++ SS FD+EGV+TQ ++ +G++ Y L
Sbjct: 267 YRKSSFLLDHLGKTILPTWFNISERPHVMRGLASSPFDSEGVRTQDLEIITDGVLATYLL 326
Query: 335 STYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYIT 394
++Y+A+K+ M TG++GG H+ + S + N ++MLK++ TGLLVTE+MG G+N +T
Sbjct: 327 TSYAARKMNMTPTGHAGGIHNWYVKS----TGQNYQQMLKELGTGLLVTEVMGQGVNVVT 382
Query: 395 GDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENM 454
GDYS+GA G+W+ENG+I+Y V EITI+G L+ M +QIVA+GSD+ TR+ +GSILIE+M
Sbjct: 383 GDYSRGAAGFWVENGEIKYPVSEITIAGNLKQMLQQIVAVGSDIETRSQIQTGSILIESM 442
Query: 455 IIAGK 459
+AG+
Sbjct: 443 KVAGE 447
>gi|343502270|ref|ZP_08740127.1| peptidase PmbA [Vibrio tubiashii ATCC 19109]
gi|418480126|ref|ZP_13049192.1| peptidase PmbA [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342815007|gb|EGU49936.1| peptidase PmbA [Vibrio tubiashii ATCC 19109]
gi|384572319|gb|EIF02839.1| peptidase PmbA [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 447
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 166/426 (38%), Positives = 262/426 (61%), Gaps = 13/426 (3%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R +++ +E N+D + + +Y K G++STSD K++
Sbjct: 32 AEVAISKTTGLSVSTRMCEVENVEFNSDGALGITVYRNQRK----GSASTSDLSDKAIQQ 87
Query: 97 TINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFN 155
T+ AA +IA++T+ D +AG P E ++ P D L+ P D A +A E +A +
Sbjct: 88 TVLAALDIAQYTSEDPYAGPAPKELMVQEVP-DLDLFHPDTPDPDYAAKVAIAAEQQALS 146
Query: 156 FNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK--EMQRDNWYS 213
++ I ++ + + NSHG ++ Y S+H S I +G EM+RD Y+
Sbjct: 147 YSDKIKQSDGASYDSHYGLKVYGNSHGLLASYASSRHSTSCCVIG-QGNNGEMERDYSYT 205
Query: 214 SNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNS 273
+L PE +G AA++T+SRL A+K+ T + PV+F A +A LL ISG +
Sbjct: 206 VARHKDELWTPETVGQKAAEKTVSRLDAQKLKTGQYPVMFAADVATGLLGHLVMAISGGN 265
Query: 274 LYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYF 333
LYRKS+FL+D LGK++ + E PH+L SS FD+EGV TQ R ++ +G++ Y
Sbjct: 266 LYRKSSFLLDHLGKQVLPEWFNVSERPHVLRGLASSPFDSEGVFTQDREIITDGVLATYL 325
Query: 334 LSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYI 393
L++Y+A+K+ M TG++GG H+ + S + N ++MLK++ TGLLVTE+MG G+N +
Sbjct: 326 LTSYAARKMDMTPTGHAGGIHNWFVKS----TGQNFEQMLKELGTGLLVTEVMGQGVNVV 381
Query: 394 TGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIEN 453
TGDYS+GA G+W+ENG+IQ+ V EITI+ L++MF QIVA+G+DV TR+ +GSIL+E+
Sbjct: 382 TGDYSRGAAGFWVENGEIQFPVSEITIASNLKDMFNQIVAVGNDVETRSQIQTGSILLES 441
Query: 454 MIIAGK 459
M +AG+
Sbjct: 442 MKVAGE 447
>gi|319897382|ref|YP_004135578.1| peptidase protein pmba-like protein [Haemophilus influenzae F3031]
gi|317432887|emb|CBY81253.1| predicted peptidase protein PmbA homologue [Haemophilus influenzae
F3031]
Length = 451
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/447 (38%), Positives = 275/447 (61%), Gaps = 11/447 (2%)
Query: 15 KSEFQQLAQDM---LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVII 71
K++ Q+L Q + + A K GAS + + + +G SV R +I+ +E ND + + +
Sbjct: 12 KAQEQELRQAVSFAVELATKAGAS-AEVAVTKVSGLSVSARLQEIENVEFTNDGALGISV 70
Query: 72 YIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKL 131
Y++ K GN+STSD + ++ + + AA IA++T+ D+ GL D++ + + D +L
Sbjct: 71 YMEQQK----GNASTSDLSESAIKNAVEAALAIAKYTSPDDCTGLADKDLMAFDAPDLEL 126
Query: 132 YTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSK 191
Y + +D A +A + E A + IVN+ + + NSHG + Y S+
Sbjct: 127 YHAADVDVDKATELALQAEQAALQADKRIVNSNGASFNSHTGVKVYGNSHGMLQSYLSSR 186
Query: 192 HIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPV 251
+ +S S I ++ D Y+ + + KL P +G AK+ +SRL +K+STR+ PV
Sbjct: 187 YSLSCSVIGGVEDALENDYEYTISREFDKLQSPIWVGENCAKKVVSRLNPQKLSTREVPV 246
Query: 252 LFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSF 311
+F +A +++ FA ISG SLYRKS+FL+D LG+++ I E PH+L S+ F
Sbjct: 247 IFLNDVATGIISHFAAAISGGSLYRKSSFLLDHLGEQVLPDWFNISERPHLLRRLASTPF 306
Query: 312 DNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKE 371
D+EGV+TQ R +V++G++Q Y +++YS KKLGM +TG+SGG H+ ++ N T L
Sbjct: 307 DSEGVRTQDREIVEDGVLQTYLVTSYSGKKLGMPSTGHSGGIHNWLVKPNLTG---GLTA 363
Query: 372 MLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQI 431
+L++M TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+LQ+M K +
Sbjct: 364 LLRQMGTGLLVTDVMGQGVNIVTGDYSRGASGFWVENGEIQYPVAEITIAGQLQDMLKNM 423
Query: 432 VAIGSDVLTRNSNTSGSILIENMIIAG 458
VA+ D+ ++ +GSIL++ M I+G
Sbjct: 424 VAVADDIEHCSNIQTGSILLDKMKISG 450
>gi|444380342|ref|ZP_21179481.1| TldE/PmbA protein [Enterovibrio sp. AK16]
gi|443675611|gb|ELT82334.1| TldE/PmbA protein [Enterovibrio sp. AK16]
Length = 446
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 168/452 (37%), Positives = 267/452 (59%), Gaps = 9/452 (1%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
+ + ++E + L A K A + + + G SV R +++ +E N+D +
Sbjct: 4 KQQVAQQRTELEAAVTRALELAGK-KADAAEVAITKTTGISVSTRMCEVENVEFNSDGAL 62
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
+ +Y + K G++STSD +K++ T+ AA +IA +T+ D F+G + + +
Sbjct: 63 GITVYRGNRK----GSASTSDLSEKAIAQTVEAALDIANYTSEDPFSGPGPKELMAFDYP 118
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ P D A A E A + + I ++ + + NSHG + Y
Sbjct: 119 DLDLFHPDEPEPDHAAEKAIAAERAALDHDKRIKFSDGASYDSHYGVRVYGNSHGMLGSY 178
Query: 188 PFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTR 247
S+H IS S IA K M+RD Y+ + D +L PE +G AAKRT+SR++ ++++T
Sbjct: 179 ASSRHSISCSVIAEDSKGMERDYSYTVSRDKDELWAPEKVGIEAAKRTLSRMEPRRLATG 238
Query: 248 KCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFG 307
+ PV+F A +A LL ISG++LYRKS+FL+D LG +I +I E PHIL
Sbjct: 239 QFPVMFAADVATGLLGHLVMGISGSNLYRKSSFLLDKLGHQILPDWFEINERPHILKGMA 298
Query: 308 SSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD 367
S+ FD+EG+ T+ ++K G +Q Y ++Y+A+KL M+ TG++GG H+ + +
Sbjct: 299 SAPFDSEGLVTRDLDIIKGGELQTYLATSYAARKLNMQPTGHAGGIHNWFV----KNTGQ 354
Query: 368 NLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNM 427
+ ++MLK++ TGL+VTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L +M
Sbjct: 355 SFEQMLKELGTGLMVTELMGQGVNIVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLADM 414
Query: 428 FKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+KQIVA+G+D R+ +GSILIE+M + G+
Sbjct: 415 YKQIVAVGADTEFRSQIQTGSILIESMKVGGE 446
>gi|258622773|ref|ZP_05717791.1| Protein pmbA [Vibrio mimicus VM573]
gi|424809451|ref|ZP_18234832.1| pmbA protein [Vibrio mimicus SX-4]
gi|258584961|gb|EEW09692.1| Protein pmbA [Vibrio mimicus VM573]
gi|342323385|gb|EGU19170.1| pmbA protein [Vibrio mimicus SX-4]
Length = 447
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 166/426 (38%), Positives = 261/426 (61%), Gaps = 13/426 (3%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + + G SV R +++ +E N+D + + +Y + G++STSD +K++
Sbjct: 32 AEVAITKSTGLSVSTRMCEVENVEFNSDGALGITVY----RGQRKGSASTSDLSEKAIQQ 87
Query: 97 TINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFN 155
T+ AA +IA++T+ D +AG P E ++ P D L+ P + D A IA E A
Sbjct: 88 TVLAALDIAQYTSEDPYAGPAPKELMVQEIP-DLDLFHPDEPNPDVAAQIAIAAERAALG 146
Query: 156 FNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK--EMQRDNWYS 213
++ I ++ + + NSHG ++ Y S+H IS S I +G+ EM+RD Y+
Sbjct: 147 YSKKIKQSDGGSYDSHYGVRVYGNSHGLLASYASSRHSISCSVIG-EGRNGEMERDYSYT 205
Query: 214 SNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNS 273
L PE +G AA+ T+SRL +K+ T + P++F A +A L+ ISG +
Sbjct: 206 VARHRDDLWTPESVGLQAAENTVSRLDPQKLKTGQFPIMFAADVATGLIGHLVMAISGGN 265
Query: 274 LYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYF 333
LYRKS+FL+D LGK I + I E PH++ SS FD+EGV+TQ ++ +G++ Y
Sbjct: 266 LYRKSSFLLDHLGKTILPTWFNISERPHVMRGLASSPFDSEGVRTQDLDIITDGVLATYL 325
Query: 334 LSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYI 393
L++Y+A+K+ M TG++GG H+ + S + N ++MLK++ TGLLVTE+MG G+N +
Sbjct: 326 LTSYAARKMNMTPTGHAGGIHNWYVKS----TGQNYQQMLKELGTGLLVTEVMGQGVNVV 381
Query: 394 TGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIEN 453
TGDYS+GA G+W+ENG+I+Y V EITI+G L+ M +QIVA+GSD+ TR+ +GSILIE+
Sbjct: 382 TGDYSRGAAGFWVENGEIKYPVSEITIAGNLKQMLQQIVAVGSDIETRSQIQTGSILIES 441
Query: 454 MIIAGK 459
M +AG+
Sbjct: 442 MKVAGE 447
>gi|373467637|ref|ZP_09558931.1| protein PmbA [Haemophilus sp. oral taxon 851 str. F0397]
gi|371758358|gb|EHO47131.1| protein PmbA [Haemophilus sp. oral taxon 851 str. F0397]
Length = 451
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/457 (36%), Positives = 279/457 (61%), Gaps = 9/457 (1%)
Query: 3 QLIKNRSKFIYSKS-EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQ 61
++ +N++ + ++ E +Q + A K GAS + + + +G SV R +I+ +E
Sbjct: 2 KIAENQTALLKAQEQELRQAVSFAVELATKSGAS-AEVAVTKVSGLSVSTRLQEIENVEF 60
Query: 62 NNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENT 121
ND + + +Y+ K GN+STSD + ++ + + AA IA++T+ D+ GL D++
Sbjct: 61 TNDGALGISVYMGQQK----GNASTSDLSESAIQNAVEAALAIAKYTSPDDCTGLADKDL 116
Query: 122 LEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSH 181
+ + + +LY + +D A +A + E A + I+N+ + + NSH
Sbjct: 117 MAFDAPNLELYHAADVDVDKATELALQAEKAALEADERIINSNGASFNSHTGVKVYGNSH 176
Query: 182 GFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKA 241
G + Y S++ +S S I ++ D Y+ + + KL P +G AK+ +SRL
Sbjct: 177 GMLQSYLSSRYSLSCSVIGGVEDALENDYEYTISREFDKLQSPIWVGENCAKKVVSRLNP 236
Query: 242 KKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPH 301
+K+STR+ PV+F +A L++ FA ISG SLYRKS+FL+D LGK++ I E PH
Sbjct: 237 QKLSTREVPVIFLNDVATGLISHFAAAISGGSLYRKSSFLLDHLGKQVLPDWFNISERPH 296
Query: 302 ILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISN 361
+L S+ FD+EGV+TQ R +V++GI+Q Y +++YS KKLGM +TG++GG H+ ++
Sbjct: 297 LLRRLASTPFDSEGVRTQDREIVEDGILQTYLVTSYSGKKLGMPSTGHAGGIHNWLV--- 353
Query: 362 KTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITIS 421
K + L +L++M TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+
Sbjct: 354 KPNLAGGLTALLRQMGTGLLVTDVMGQGVNIVTGDYSRGASGFWVENGEIQYPVAEITIA 413
Query: 422 GKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
G+LQ+M K +VA+ D+ R++ +GSIL++ M I+G
Sbjct: 414 GQLQDMLKNMVAVADDIEHRSNIQTGSILLDKMKISG 450
>gi|148826236|ref|YP_001290989.1| anaerobic ribonucleotide reductase-activating protein [Haemophilus
influenzae PittEE]
gi|148716396|gb|ABQ98606.1| anaerobic ribonucleotide reductase-activating protein [Haemophilus
influenzae PittEE]
Length = 451
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 170/447 (38%), Positives = 276/447 (61%), Gaps = 11/447 (2%)
Query: 15 KSEFQQLAQDM---LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVII 71
K++ Q+L Q + + A K GAS + + + +G SV R +I+ +E ND + + +
Sbjct: 12 KAQEQELRQAVSFAVELATKAGAS-AEVAVTKVSGLSVSARLQEIENVEFTNDGALGISV 70
Query: 72 YIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKL 131
Y+ K GN+STSD + ++ + + AA IA++T+ D+ GL D++ + + D +L
Sbjct: 71 YMGQQK----GNASTSDLSESAIKNAVEAALAIAKYTSPDDCTGLADKDLMAFDAPDLEL 126
Query: 132 YTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSK 191
Y +++D A +A + E A + I+N+ + + NSHG + Y S+
Sbjct: 127 YHAADVNVDKATELALQAEKAALEADERIINSNGASFNSHTGVKVYGNSHGMLQSYLSSR 186
Query: 192 HIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPV 251
+ +S S I ++ D Y+ + + KL P +G AK+ +SRL +K+STR+ PV
Sbjct: 187 YSLSCSVIGGVEDALENDYEYTISREFDKLQSPIWVGENCAKKVVSRLNPQKLSTREVPV 246
Query: 252 LFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSF 311
+F +A +++ FA ISG SLYRKS+FL+D LGK++ I E PH+L S+ F
Sbjct: 247 IFLNDVATGIISHFAAAISGGSLYRKSSFLLDHLGKQVLPDWFNISERPHLLRRLASTPF 306
Query: 312 DNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKE 371
D+EGV+TQ R +V+NGI+Q Y +++YS KKLGM +TG++GG ++ ++ N T L
Sbjct: 307 DSEGVRTQDREIVENGILQTYLVTSYSGKKLGMPSTGHAGGIYNWLVKPNLTG---GLTA 363
Query: 372 MLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQI 431
+L++M TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+LQ+M K +
Sbjct: 364 LLRQMGTGLLVTDVMGQGVNIVTGDYSRGASGFWVENGEIQYPVAEITIAGQLQDMLKNM 423
Query: 432 VAIGSDVLTRNSNTSGSILIENMIIAG 458
+A+ D+ R++ +GSIL++ M I+G
Sbjct: 424 LAVADDIEHRSNIQTGSILLDKMKISG 450
>gi|260581799|ref|ZP_05849595.1| PmbA protein [Haemophilus influenzae NT127]
gi|260094992|gb|EEW78884.1| PmbA protein [Haemophilus influenzae NT127]
Length = 451
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/444 (38%), Positives = 271/444 (61%), Gaps = 8/444 (1%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ E +Q + A K GAS + + + +G SV R +I+ +E ND + + +Y+
Sbjct: 15 EQELRQAVSFAVALATKAGAS-AEVAVTKVSGLSVSARLQEIENVEFTNDGALGISVYMG 73
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K GN+STSD + ++ + + AA IA++T+ D+ GL D++ + + D +LY
Sbjct: 74 QQK----GNASTSDLSESAIKNAVEAALAIAKYTSPDDCTGLADKDLMAFDAPDLELYHA 129
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
+ +D A +A + E A + I+N+ + + NSHG + Y S++ +
Sbjct: 130 ADVDVDKATELALQAEKAALEADERIINSNGASFNSHTGVKVYGNSHGMLQSYLSSRYSL 189
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S I ++ D Y+ + + KL P +G AK+ +SRL +K+STR+ PV+F
Sbjct: 190 SCSVIGGVEDTLENDYEYTISREFDKLQSPIWVGENCAKKVVSRLNPQKLSTREVPVIFL 249
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+A L++ FA ISG SLYRKS+FL++ LGK++ I E PH+L S+ FD+E
Sbjct: 250 NDVATGLISHFAAAISGGSLYRKSSFLLNYLGKQVLPDWFNISERPHLLRRLASTPFDSE 309
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+TQ R +V+NGI+Q Y +++YS KKLGM +TG++GG H+ ++ N T L +L+
Sbjct: 310 GVRTQDREIVENGILQTYLVTSYSGKKLGMPSTGHAGGIHNWLVKPNLTG---GLTALLR 366
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+LQ+M K ++A+
Sbjct: 367 QMGTGLLVTDVMGQGVNIVTGDYSRGASGFWVENGEIQYPVAEITIAGQLQDMLKNMLAV 426
Query: 435 GSDVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GSIL++ M I+G
Sbjct: 427 ADDIEHRSNIQTGSILLDKMKISG 450
>gi|209694087|ref|YP_002262015.1| peptidase PmbA [Aliivibrio salmonicida LFI1238]
gi|208008038|emb|CAQ78177.1| protein PmbA (protein TldE) [Aliivibrio salmonicida LFI1238]
Length = 447
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/453 (39%), Positives = 265/453 (58%), Gaps = 10/453 (2%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
+++ + K E + L A K AS + + + G SV G+++ +E N D +
Sbjct: 4 KAQMMNQKIELEAAVAKALEMATK-HASAAEVAITKTTGISVSTLMGEVENVEFNRDGAL 62
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
+ +Y K G++STSD K++ +T+ AA +IA +T+ D F+G + + N
Sbjct: 63 GITVYRGHRK----GSASTSDLSDKAIQETVAAALDIANYTSEDPFSGPAPKELMAQNIP 118
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ P D A A E A ++S I ++ + + NSHG ++ Y
Sbjct: 119 DLDLFHPDDPEPDYAAQKAIEAEEAALAYHSSIKQSDGASYDSHYGIKVYGNSHGMLASY 178
Query: 188 PFSKHIISISPIAI-KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
P S+H IS S I + K M+RD Y+ L + +G AA+RT+SRL A+K++T
Sbjct: 179 PSSRHSISCSVIGVDKNGNMERDYSYTVARHRDDLWDAKKVGLDAAERTVSRLDAQKLNT 238
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
K PV+F A +A L+ ISG +LYRKSTF++D L +KI + E PHIL
Sbjct: 239 MKVPVMFSADVATGLIGHLVMAISGANLYRKSTFMLDKLNEKILPDWFNVSERPHILKGL 298
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
SS FD+EG+ TQ R ++ +G++ Y L++Y+A+KL M TG++GG H+ + S +
Sbjct: 299 ASSPFDSEGLYTQDREIITDGVLATYLLTSYAARKLNMTPTGHAGGIHNWFVKS----TG 354
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
+ +MLK M TGLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G L
Sbjct: 355 QSFDQMLKTMGTGLLVTELMGQGVNTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLAE 414
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
M++ I+A+GSDV TR+ +GSILIE+M IAG+
Sbjct: 415 MYQNIIAVGSDVETRSQIQTGSILIESMKIAGQ 447
>gi|212711073|ref|ZP_03319201.1| hypothetical protein PROVALCAL_02142 [Providencia alcalifaciens DSM
30120]
gi|212686241|gb|EEB45769.1| hypothetical protein PROVALCAL_02142 [Providencia alcalifaciens DSM
30120]
Length = 446
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/445 (38%), Positives = 270/445 (60%), Gaps = 9/445 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ + +Q L +AK + + N+ G SV R+G ++ +E N+D + + +Y
Sbjct: 11 RKQLEQAVAHALEFAKSR-CDGAEVAVNKSTGISVSTRQGDVENVEFNSDGALGITVY-- 67
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K G++S++D +++ T+ AA +IA +T+ D AG +E+ L + D L+
Sbjct: 68 --HKQRKGSASSTDLSAEAIERTVQAAIDIANYTSEDPCAGPAEESLLAFDAPDLNLFQA 125
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
LS ++A +A E A N +S IVN E + NS G + Y S++ +
Sbjct: 126 TELSPEEAIKLASIAEMTALNTDSRIVNTEGGSFNGHYGIRVFGNSLGLLKSYSSSRYSM 185
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S IA + EM+RD Y+ + L PE +G A+RT+SRL +K+ T K PV+F
Sbjct: 186 SSCVIAEQNGEMERDYAYTIARSMQALKSPEWVGQECARRTLSRLSPRKLPTMKAPVIFA 245
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+ +A L ISG+S+YRKS+FL+DSLGK+I + + I E PH++G SS FD+E
Sbjct: 246 SEVATGLFGHLVGAISGSSIYRKSSFLMDSLGKQILPNWLTINEQPHLMGGLASSPFDSE 305
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+T +R +V+NG++Q + +++YSA+KLG+++TG++GG H+ I + S D L LK
Sbjct: 306 GVRTTERNIVENGVLQTWLMTSYSARKLGLQSTGHAGGIHNW-RIEGQGLSFDAL---LK 361
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L++M+ +V I
Sbjct: 362 QMGTGLVVTELMGQGVSGITGDYSRGASGFWVENGEIQYPVSEITIAGNLKDMWMNMVTI 421
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
D+ TR++ GS+LI M IAG+
Sbjct: 422 ADDIETRSNIQCGSVLIPEMSIAGQ 446
>gi|170728709|ref|YP_001762735.1| peptidase U62 modulator of DNA gyrase [Shewanella woodyi ATCC
51908]
gi|169814056|gb|ACA88640.1| peptidase U62 modulator of DNA gyrase [Shewanella woodyi ATCC
51908]
Length = 446
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 165/433 (38%), Positives = 266/433 (61%), Gaps = 8/433 (1%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L+YA K+G + + + ++ G SV R +++ +E N D + + ++ +DG K G+SS
Sbjct: 21 LDYANKLGTTAAEVAISKQQGLSVSTRLKEVETVEFNKDGALGITLF-RDGCK---GSSS 76
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ + AA +IARFT+SD GL + + D +LY P +S + +
Sbjct: 77 TSDLSPEAIKLAVKAADDIARFTSSDPNNGLAEAELMATEFPDLELYHPQDISAEQLTEL 136
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE 205
A R E A N +S I N++ + NSHGF++G+ S++ +S I
Sbjct: 137 AARSEEAALNVDSRITNSDGASANAHTGLKVYGNSHGFLNGFSSSRYSLSCVVIGESNGN 196
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
MQRD Y+ + + +L E +G A+++T+ RL ++KI+T + PVL +A L+
Sbjct: 197 MQRDYDYTISRNFNELLSAEEVGQKASEKTLGRLDSRKIATTELPVLLAPDIATGLMGHL 256
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
ISG+SLYRKS+FL+DS+ +IF I E PH+ G+ S+ +D+EGV TQ R ++K
Sbjct: 257 VSAISGSSLYRKSSFLLDSIDTQIFPDWFSIEEQPHLKGALASAIYDSEGVATQDRSIIK 316
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
+G++ Y L++YSA+KLG+K TG++GG ++ + + + E++K+M TG++VTE+
Sbjct: 317 DGVLSTYLLTSYSARKLGLKNTGHAGGIYNWTL----SHTGQTFDELVKQMGTGVIVTEV 372
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
MG G+N +TGDYS+GA G+++ENG I Y VEE TI+G L++MF+ IVA+ SD R+S
Sbjct: 373 MGQGVNAVTGDYSRGAAGFYVENGVILYPVEEFTIAGNLKDMFQNIVAVSSDRDLRSSIR 432
Query: 446 SGSILIENMIIAG 458
+G IL+ +M IAG
Sbjct: 433 TGGILLSDMKIAG 445
>gi|338997029|ref|ZP_08635734.1| PmbA protein [Halomonas sp. TD01]
gi|338766102|gb|EGP21029.1| PmbA protein [Halomonas sp. TD01]
Length = 446
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 169/441 (38%), Positives = 260/441 (58%), Gaps = 9/441 (2%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
Q A++ L AKK+GA + + + G V VR G+++ +E + D+ + + +Y+ K
Sbjct: 14 LTQRAEEALALAKKLGADAAEVGASVDQGLGVSVRLGEVETVELSRDQGIAITLYVGQRK 73
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++S++D S+ T+ A IAR+T D AGL D + + D K++ PW L
Sbjct: 74 ----GSASSTDASSASIKATVEKALAIARYTGEDPAAGLADAALMATDLPDLKVHYPWAL 129
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ D+A +A CE + I +E +++ + + ANSHGF+ S H +S
Sbjct: 130 TTDEAIDLALACEKAGRDVAG-IHQSEGASLSSGEGVRVYANSHGFLGTQKGSSHSLSCM 188
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA K MQRD Y+S +P L P IG AA RT+ RL A++ T PVLF+ L
Sbjct: 189 LIAQDEKGMQRDYEYTSARNPAMLRDPADIGREAASRTLRRLGAQRPPTGTFPVLFDPSL 248
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
+ L+ ++G +LYR+++FL D LG +F S + E P +G+ SS FD EGV+
Sbjct: 249 SSGLVGHLMGALAGGALYREASFLCDRLGSPLFPSWFGLEERPMEVGATASSPFDAEGVQ 308
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T+ ++ G + Y LS YSA++LGM++TGN+GGA +L +++ T + E+LK+M
Sbjct: 309 TRNNRFIEQGNVASYMLSAYSARRLGMQSTGNAGGARNLRLLAPLTPRN----ELLKQMG 364
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
G+ VTELMG G+N +TGDYS+GA G+W+ENG++QY +EE TI+ L +MF +VA+G D
Sbjct: 365 RGIWVTELMGQGVNGVTGDYSRGAAGFWVENGEVQYPIEEFTIASNLNSMFAGLVAVGDD 424
Query: 438 VLTRNSNTSGSILIENMIIAG 458
+ TR S +GS LI+ M +AG
Sbjct: 425 IDTRGSIHTGSWLIDAMTVAG 445
>gi|419839884|ref|ZP_14363285.1| protein PmbA [Haemophilus haemolyticus HK386]
gi|386908986|gb|EIJ73670.1| protein PmbA [Haemophilus haemolyticus HK386]
Length = 451
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/457 (37%), Positives = 279/457 (61%), Gaps = 9/457 (1%)
Query: 3 QLIKNRSKFIYSKS-EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQ 61
++ +N++ + ++ E +Q + A K GAS + + + +G SV R +I+ +E
Sbjct: 2 KIAENQTALLKAQEQELRQAVSFAIELATKSGAS-AEVAVTKVSGLSVSTRLQEIENVEF 60
Query: 62 NNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENT 121
ND + + +Y+ K GN+STSD + ++ + + AA IA++T+ D+ GL D++
Sbjct: 61 TNDGALGISVYMGQQK----GNASTSDLSEGAIRNAVEAALAIAKYTSPDDCTGLADKDL 116
Query: 122 LEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSH 181
+ + D +LY +++D A +A E A + I+N+ + + NSH
Sbjct: 117 MAFDAPDLELYHAADVNVDKATELALEAEKAALEADERIINSNGASFNSHTGVKVYGNSH 176
Query: 182 GFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKA 241
G + Y S++ +S S I ++ D Y+ + + KL P +G AK+ ISRL
Sbjct: 177 GMLQSYLSSRYSLSCSVIGGVEDALENDYEYTISREFDKLQSPIWVGENCAKKVISRLNP 236
Query: 242 KKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPH 301
+K+STR+ PV+F +A L++ FA ISG SLYRKS+FL+D LG+++ I E PH
Sbjct: 237 QKLSTREVPVIFLNDVATGLISHFATAISGGSLYRKSSFLLDHLGEQVLPDWFNISERPH 296
Query: 302 ILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISN 361
+L S+ FD+EGV+TQ R +V++GI+Q Y +++YS KKLGM +TG++GG H+ ++
Sbjct: 297 LLRRLASTPFDSEGVRTQDREIVEDGILQTYLVTSYSGKKLGMLSTGHAGGIHNWLV--- 353
Query: 362 KTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITIS 421
K + L +L++M TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+
Sbjct: 354 KPNLNGGLTALLRQMGTGLLVTDVMGQGVNIVTGDYSRGASGFWVENGEIQYPVAEITIA 413
Query: 422 GKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
G+LQ+M K +VA+ D+ R++ +GSIL++ M I+G
Sbjct: 414 GQLQDMLKNMVAVADDIEHRSNIQTGSILLDKMKISG 450
>gi|417821844|ref|ZP_12468457.1| protein pmbA [Vibrio cholerae HE39]
gi|423958660|ref|ZP_17735561.1| modulator of DNA gyrase family protein [Vibrio cholerae HE-40]
gi|423985805|ref|ZP_17739117.1| modulator of DNA gyrase family protein [Vibrio cholerae HE-46]
gi|340035880|gb|EGQ96857.1| protein pmbA [Vibrio cholerae HE39]
gi|408656076|gb|EKL27182.1| modulator of DNA gyrase family protein [Vibrio cholerae HE-40]
gi|408663325|gb|EKL34204.1| modulator of DNA gyrase family protein [Vibrio cholerae HE-46]
Length = 447
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 166/426 (38%), Positives = 261/426 (61%), Gaps = 13/426 (3%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + + G SV R +++ +E N+D + + +Y + G++STSD + ++
Sbjct: 32 AEVAITKSTGLSVSTRMCEVENVEFNSDGALGITVY----RGQRKGSASTSDLSENAIRQ 87
Query: 97 TINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFN 155
T+ AA +IA++T++D +AG P E ++ P D L+ P + D A IA E A
Sbjct: 88 TVLAALDIAQYTSADPYAGPAPKELMVQEIP-DLDLFHPDEPNPDVAAQIAIAAERAALG 146
Query: 156 FNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK--EMQRDNWYS 213
++ I ++ + + NSHG ++ Y S+H IS S I +G+ EM+RD Y+
Sbjct: 147 YSKKIKQSDGGSYDSHYGIRVYGNSHGLLASYASSRHNISCSVIG-EGRNGEMERDYSYT 205
Query: 214 SNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNS 273
L PE +G AA+ T+SRL +K+ T + PV+F A +A L+ ISG +
Sbjct: 206 VARHRDDLWTPESVGLQAAENTVSRLDPQKLKTGQFPVMFAADVATGLIGHLVMAISGGN 265
Query: 274 LYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYF 333
LYRKS+FL+D LGK I + I E PH++ SS FD+EGV+TQ ++ +G++ Y
Sbjct: 266 LYRKSSFLLDHLGKTILPTWFNISERPHVMRGLASSPFDSEGVRTQDLEIITDGVLATYL 325
Query: 334 LSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYI 393
L++Y+A+K+ M TG++GG H+ + S + N ++MLK++ TGLLVTE+MG G+N +
Sbjct: 326 LTSYAARKMNMTPTGHAGGIHNWYVKS----TGQNYQQMLKELGTGLLVTEVMGQGVNVV 381
Query: 394 TGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIEN 453
TGDYS+GA G+W+ENG+I+Y V EITI+G L+ M +QIVA+GSD+ TR+ +GSILIE+
Sbjct: 382 TGDYSRGAAGFWVENGEIKYPVSEITIAGNLKQMLQQIVAVGSDIETRSQIQTGSILIES 441
Query: 454 MIIAGK 459
M +AG+
Sbjct: 442 MKVAGE 447
>gi|416944427|ref|ZP_11934818.1| peptidase U62 modulator of DNA gyrase, partial [Burkholderia sp.
TJI49]
gi|325524016|gb|EGD02203.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. TJI49]
Length = 252
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 144/252 (57%), Positives = 197/252 (78%)
Query: 208 RDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFAR 267
RD+WYSS + L PE +G YAA+R ++R+ A+++ TRK PVLFEAPLA LL F +
Sbjct: 1 RDDWYSSKRNALDLAAPEAVGRYAAERALARMGARRLDTRKVPVLFEAPLAAGLLGAFVQ 60
Query: 268 LISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNG 327
+SG +LYRK++FLVDSLGK +F+ H+QI+EDPH+ + GS+ FD EGV+T+ R VVK+G
Sbjct: 61 AVSGGALYRKTSFLVDSLGKPVFAPHVQIVEDPHVPRAMGSAPFDEEGVRTRARSVVKDG 120
Query: 328 IIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMG 387
+++GYFLSTYSA+KLG +TTGN+GG+H+L + S T+ D+ MLKK+ TGLL+TELMG
Sbjct: 121 VVEGYFLSTYSARKLGTQTTGNAGGSHNLALRSANTQPGDDFDAMLKKLGTGLLLTELMG 180
Query: 388 DGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSG 447
G+NY+TGDYS+GA G+W+ENG IQY VEEIT++ LQ MF+ IVA+G+D + R + +G
Sbjct: 181 QGVNYVTGDYSRGAAGFWVENGVIQYPVEEITVASTLQEMFRHIVAVGADSIVRGTKETG 240
Query: 448 SILIENMIIAGK 459
S+LIE M IAG+
Sbjct: 241 SVLIEQMTIAGQ 252
>gi|163750447|ref|ZP_02157686.1| pmba protein [Shewanella benthica KT99]
gi|161329768|gb|EDQ00756.1| pmba protein [Shewanella benthica KT99]
Length = 446
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 167/433 (38%), Positives = 266/433 (61%), Gaps = 8/433 (1%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YAK++G S + + ++ G SV R +++ +E N D + + ++ +DG K G+SS
Sbjct: 21 LEYAKQLGTSGAEVAISKQQGLSVSTRMKEVETVEFNKDGALGITLF-RDGCK---GSSS 76
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ + + AA IA+FT+SD + GL + + + D LY P ++ ++ +
Sbjct: 77 TSDLSPEAIKEAVKAANGIAKFTSSDPYNGLAEAELMAKDFPDLDLYHPQEVTPEELIEL 136
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE 205
A R E A + +S I N++ + NSHGF+ GY S++ +S I
Sbjct: 137 AARAEEAALDVDSRITNSDGASANAHTGIKVYGNSHGFLHGYSSSRYSLSCVVIGETDGN 196
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
MQRD Y+ +L PE +G A+++T+ RL +KI+T + PVLF +A L+
Sbjct: 197 MQRDYDYTIARKLSELLSPEEVGRKASEKTLGRLGGRKIATTELPVLFAPEIATGLMGHL 256
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
ISG SLYRKS+FL+DS+ KIF I E PH++G S+S+D+EGV TQ R +++
Sbjct: 257 VGAISGGSLYRKSSFLLDSIDTKIFPDWFSIDEQPHMVGGLASASYDSEGVATQDRAIIQ 316
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
+G++ Y L++YSA+KLG+K TG++GG ++ + + + E++K+M TGL+VTE+
Sbjct: 317 DGVLSTYLLTSYSARKLGLKNTGHAGGIYNWTL----SHTGQTFDELVKEMGTGLIVTEV 372
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
MG G+N +TGDYS+GA G+++ENG + Y VEEITI+G L++MF+ IVA+ D R+S
Sbjct: 373 MGQGVNAVTGDYSRGAAGFYVENGVVLYPVEEITIAGNLKDMFQNIVAVSKDRDLRSSIR 432
Query: 446 SGSILIENMIIAG 458
+G IL+ +M IAG
Sbjct: 433 TGGILLSDMKIAG 445
>gi|422019871|ref|ZP_16366413.1| peptidase PmbA [Providencia alcalifaciens Dmel2]
gi|414102495|gb|EKT64087.1| peptidase PmbA [Providencia alcalifaciens Dmel2]
Length = 446
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 172/445 (38%), Positives = 271/445 (60%), Gaps = 9/445 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ + +Q L +AK + + N+ G SV R+G ++ +E N+D + + +Y
Sbjct: 11 RKQLEQAVAHALEFAKSR-CDGAEVAVNKSTGISVSTRQGDVENVEFNSDGALGITVY-- 67
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K G++S++D ++++ T+ AA +IA +T+ D AG +++ L + D L+
Sbjct: 68 --HKQRKGSASSTDLSEEAIERTVQAAIDIANYTSEDPCAGPAEKSLLAFDAPDLNLFQA 125
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
LS ++A +A E A N +S IVN E + NS G + Y S++ +
Sbjct: 126 TELSPEEAIKLASIAEMTALNADSRIVNTEGGSFNGHYGIRVFGNSLGLLKSYSSSRYSM 185
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S IA + EM+RD Y+ + L PE +G A+RT+SRL +K+ T K PV+F
Sbjct: 186 SSCVIAEQNGEMERDYAYTIARSMQALKSPEWVGQECARRTLSRLSPRKLPTMKAPVIFA 245
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+ +A L ISG+S+YRKS+FL+DSLGK+I + + I E PH++G SS FD+E
Sbjct: 246 SEVATGLFGHLVGAISGSSIYRKSSFLMDSLGKQILPNWLTINEQPHLMGGLASSPFDSE 305
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+T +R +V+NG++Q + +++YSA+KLG+++TG++GG H+ I + S D L LK
Sbjct: 306 GVRTTERNIVENGVLQTWLMTSYSARKLGLQSTGHAGGIHNW-RIEGQGLSFDAL---LK 361
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L++M+ +V I
Sbjct: 362 QMGTGLVVTELMGQGVSGITGDYSRGASGFWVENGEIQYPVSEITIAGNLKDMWMNMVTI 421
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
D+ TR++ GS+LI M IAG+
Sbjct: 422 ADDIETRSNIQCGSVLIPEMSIAGQ 446
>gi|323496082|ref|ZP_08101142.1| peptidase PmbA [Vibrio sinaloensis DSM 21326]
gi|323318826|gb|EGA71777.1| peptidase PmbA [Vibrio sinaloensis DSM 21326]
Length = 447
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 168/426 (39%), Positives = 259/426 (60%), Gaps = 13/426 (3%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + + G SV R +++ +E N+D + + +Y + G++STSD +K++
Sbjct: 32 AEVAITKTTGLSVSTRMCEVENVEFNSDGALGITVY----RGQRKGSASTSDLSEKAIQQ 87
Query: 97 TINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFN 155
T+ AA +IA++T+ D AG P E +E P D L+ P D A +A E +A +
Sbjct: 88 TVLAALDIAQYTSEDPCAGPAPKELMVEDIP-DLDLFHPDTPDPDYAAQVAIAAEQKALS 146
Query: 156 FNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK--EMQRDNWYS 213
F+ I ++ + + NSHG ++ Y S+H S I +G EM+RD Y+
Sbjct: 147 FSDKIKQSDGASYDSHYGLKVYGNSHGLLASYASSRHSTSCCVIG-QGNNGEMERDYDYT 205
Query: 214 SNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNS 273
L PE +G AA++TISRL A+K+ T + PV+F A +A L+ ISG +
Sbjct: 206 LARHKDDLLAPETVGLKAAEKTISRLDAQKLKTGQYPVMFAADVATGLIGHLVMAISGGN 265
Query: 274 LYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYF 333
LYRKS+FL+D LG+++ I E PH+L SS FD+EGV TQ R ++ +G++ Y
Sbjct: 266 LYRKSSFLLDKLGEQVLPDWFNIHEKPHVLRGLASSPFDSEGVFTQDREIITDGVLATYL 325
Query: 334 LSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYI 393
L++Y+A+K+ M TG++GG H+ + S + + ++MLK++ TGLLVTE MG G+N +
Sbjct: 326 LTSYAARKMDMTPTGHAGGIHNWYVQS----TGQSFEQMLKELGTGLLVTETMGQGVNIV 381
Query: 394 TGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIEN 453
TGDYS+GA G+W+ENG+IQY V EITI+G L+ +F QIVA+GSDV TR+ +GSIL+E+
Sbjct: 382 TGDYSRGAAGFWVENGQIQYPVSEITIAGNLKEIFNQIVAVGSDVETRSQIQTGSILLES 441
Query: 454 MIIAGK 459
+ IAG+
Sbjct: 442 LKIAGE 447
>gi|352104408|ref|ZP_08960374.1| PmbA protein [Halomonas sp. HAL1]
gi|350598874|gb|EHA14976.1| PmbA protein [Halomonas sp. HAL1]
Length = 446
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 165/429 (38%), Positives = 255/429 (59%), Gaps = 9/429 (2%)
Query: 30 KKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDF 89
K++GA + + + G V VR+G+++ +E + D+ + V +Y+ K G++S++D
Sbjct: 26 KRLGADAAEVGASVDQGIGVSVRQGEVETVELSRDQGIAVTLYVGQRK----GSASSTDA 81
Query: 90 CKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRC 149
S+ + A IAR+T D AGL D + + D +++ PW L+ D+A +A C
Sbjct: 82 SSASIQAAVEKALAIARYTGEDPAAGLADASLMATELPDLEVHYPWALTTDEAIELALAC 141
Query: 150 ENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRD 209
E + + I ++ +++ + + ANSHGF+ S H +S IA MQRD
Sbjct: 142 EQAGRDVDG-ISQSDGASLSSGEGVRVYANSHGFLGTQKGSSHSLSCMLIAQDASGMQRD 200
Query: 210 NWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLI 269
Y+S DPK L P +G AA+RT+ RL AK+ T PVLF+ L+ L+ +
Sbjct: 201 YDYTSARDPKALRDPAAVGREAAERTLRRLGAKRPPTGTFPVLFDPSLSSGLIGHLLSGL 260
Query: 270 SGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGII 329
+G +LYR+++FL D LG +F + E P +G+ SS FD EGV+T+ + G I
Sbjct: 261 AGGALYRQASFLCDRLGTPLFPDWFSLEERPMEIGATASSPFDGEGVQTRNNRFIDQGSI 320
Query: 330 QGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDG 389
Y LS+YSA++LGM+TTGN+GGA ++ +++ +S D+L LK+M G+ VTELMG G
Sbjct: 321 ASYMLSSYSARRLGMQTTGNAGGARNVRLVA-PLQSRDSL---LKEMGRGIWVTELMGQG 376
Query: 390 INYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSI 449
+N +TGDYS+GA G+W+E+GK+QY +EE TI+G L+ MF +V IG D TR S +GS
Sbjct: 377 VNGVTGDYSRGAAGFWVEDGKVQYPIEEFTIAGNLERMFAGLVGIGDDTDTRGSVHTGSW 436
Query: 450 LIENMIIAG 458
LI+ M +AG
Sbjct: 437 LIDAMTVAG 445
>gi|422308466|ref|ZP_16395614.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1035(8)]
gi|408617409|gb|EKK90529.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1035(8)]
Length = 447
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 166/426 (38%), Positives = 260/426 (61%), Gaps = 13/426 (3%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + + G SV R +++ +E N+D + + +Y + G++STSD + ++
Sbjct: 32 AEVAITKSTGLSVSTRMCEVENVEFNSDGALGITVY----RGQRKGSASTSDLSENAIRQ 87
Query: 97 TINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFN 155
T+ AA +IA++T++D +AG P E ++ P D L+ P + D A IA E A
Sbjct: 88 TVLAALDIAQYTSADPYAGPAPKELMVQEIP-DLDLFHPDEPNPDVAAQIAIAAERAALG 146
Query: 156 FNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK--EMQRDNWYS 213
++ I ++ + + NSHG ++ Y S+H IS S I +G+ EM+RD Y+
Sbjct: 147 YSKKIKQSDGGSYDSHYGIRVYGNSHGLLASYASSRHSISCSVIG-EGRNGEMERDYSYT 205
Query: 214 SNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNS 273
L PE +G AA+ T+SRL +K+ T + PV+F A +A L+ ISG +
Sbjct: 206 VARHRDDLWTPESVGLQAAENTVSRLDPQKLKTGQFPVMFAADVATGLIGHLVMAISGGN 265
Query: 274 LYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYF 333
LYRKS+FL+D LGK I + I E PH++ SS FD+EGV+TQ ++ +G++ Y
Sbjct: 266 LYRKSSFLLDHLGKTILPTWFNISERPHVMRGLASSPFDSEGVRTQDLEIITDGVLATYL 325
Query: 334 LSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYI 393
L +Y+A+K+ M TG++GG H+ + S + N ++MLK++ TGLLVTE+MG G+N +
Sbjct: 326 LISYAARKMNMTPTGHAGGIHNWYVKS----TGQNYQQMLKELGTGLLVTEVMGQGVNVV 381
Query: 394 TGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIEN 453
TGDYS+GA G+W+ENG+I+Y V EITI+G L+ M +QIVA+GSD+ TR+ +GSILIE+
Sbjct: 382 TGDYSRGAAGFWVENGEIKYPVSEITIAGNLKQMLQQIVAVGSDIETRSQIQTGSILIES 441
Query: 454 MIIAGK 459
M +AG+
Sbjct: 442 MKVAGE 447
>gi|359786616|ref|ZP_09289736.1| PmbA protein [Halomonas sp. GFAJ-1]
gi|359296147|gb|EHK60401.1| PmbA protein [Halomonas sp. GFAJ-1]
Length = 446
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 172/437 (39%), Positives = 256/437 (58%), Gaps = 9/437 (2%)
Query: 22 AQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFY 81
A++ L AK++GA + + + G + VR G+++ +E + D+ + V +Y+ K
Sbjct: 18 AEEALALAKQLGADAAEVGASVDQGVGISVRLGEVETVELSRDQGIAVTLYVGQRK---- 73
Query: 82 GNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDD 141
G++S+SD S+ T+ A IAR+T D AGL D + + D K++ PW L+ D+
Sbjct: 74 GSASSSDASSASIKATVEKALAIARYTGEDPAAGLADAALMASHLPDLKVHYPWPLTTDE 133
Query: 142 AKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAI 201
A IA CE + I +E +++ + + ANSHGF+ S H +S IA
Sbjct: 134 AIEIALACEQAGRSVAG-IHQSEGASLSSGEGVRVYANSHGFLGTQKGSSHSLSCMLIAQ 192
Query: 202 KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFEL 261
MQRD Y+S +P KL PE +G AA RT+ RL AK+ T PVLF+ LA L
Sbjct: 193 DENGMQRDYDYTSARNPSKLRDPESVGQEAAARTLRRLGAKRPPTGTFPVLFDPTLASGL 252
Query: 262 LNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKR 321
+ ++G +LYR+++FL D LG +F + + E P +G+ SS FD EGV+T+
Sbjct: 253 IGHLMGALAGGALYRQASFLCDRLGAPLFPNWFSLEERPMEVGATASSPFDGEGVQTRNN 312
Query: 322 LVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLL 381
+ G I Y LS+YSA++LGM+TT N+GGA ++ ++ N S D L LK+M G+
Sbjct: 313 RFIDQGNIASYMLSSYSARRLGMQTTANAGGARNIRLV-NPATSRDAL---LKEMGRGIW 368
Query: 382 VTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTR 441
VTELMG G+N +TGDYS+GA G+W+ENGK+QY +EE TI+G L MF +V + D+ TR
Sbjct: 369 VTELMGQGVNGVTGDYSRGAAGFWVENGKVQYPIEEFTIAGNLNTMFAGLVGVADDIDTR 428
Query: 442 NSNTSGSILIENMIIAG 458
S +GS LI+ M +AG
Sbjct: 429 GSIHTGSWLIDAMTVAG 445
>gi|417846375|ref|ZP_12492382.1| Protein pmbA [Haemophilus haemolyticus M21639]
gi|341952513|gb|EGT79038.1| Protein pmbA [Haemophilus haemolyticus M21639]
Length = 451
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/457 (36%), Positives = 277/457 (60%), Gaps = 9/457 (1%)
Query: 3 QLIKNRSKFIYSKS-EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQ 61
++ +N++ + ++ E +Q + A K GA+ + + + +G SV R +I+ +E
Sbjct: 2 KIAENQTALLKAQEQELRQAVSFAVELATKSGAT-AEVAVTKVSGLSVSTRLQEIENVEF 60
Query: 62 NNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENT 121
ND + + +Y+ K GN+STSD + ++ + + AA IA++T+ D+ GL D++
Sbjct: 61 TNDGALGISVYMGQQK----GNASTSDLSEGAIRNAVEAALAIAKYTSPDDCTGLADKDL 116
Query: 122 LEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSH 181
+ + D +LY + +D A +A + E A + I+N+ + + NSH
Sbjct: 117 MAFDAPDLELYHAADMDVDKATELALQAEKAALEADERIINSNGASFNSHTGVKVYGNSH 176
Query: 182 GFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKA 241
G + Y S++ +S S I ++ D Y+ + + KL P +G AK+ ISRL
Sbjct: 177 GMLQSYLSSRYSLSCSVIGGVEDALENDYEYTISREFDKLQSPIWVGENCAKKVISRLNP 236
Query: 242 KKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPH 301
+K+STR+ PV+F +A L++ FA ISG SLYRKS+FL+D LGK++ I E PH
Sbjct: 237 QKLSTREVPVIFLNDVATGLISHFAAAISGGSLYRKSSFLLDHLGKQVLPDWFNISEKPH 296
Query: 302 ILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISN 361
+L S+ FD+EGV+TQ R +V++GI+Q Y +++YS KKL M +TG++GG H+ ++
Sbjct: 297 LLRRLASTPFDSEGVRTQDREIVEDGILQTYLVTSYSGKKLSMPSTGHAGGIHNWLV--- 353
Query: 362 KTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITIS 421
K + L +L++M TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+
Sbjct: 354 KPNLAGGLTALLRQMGTGLLVTDVMGQGVNIVTGDYSRGASGFWVENGEIQYPVAEITIA 413
Query: 422 GKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
G+LQ+M K ++ + D+ R++ +GSIL++ M I+G
Sbjct: 414 GQLQDMLKNMITVADDIEHRSNIQTGSILLDKMKISG 450
>gi|417843489|ref|ZP_12489563.1| Protein pmbA [Haemophilus haemolyticus M21127]
gi|341949632|gb|EGT76235.1| Protein pmbA [Haemophilus haemolyticus M21127]
Length = 456
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 168/455 (36%), Positives = 276/455 (60%), Gaps = 9/455 (1%)
Query: 3 QLIKNRSKFIYSKS-EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQ 61
++ +N++ + ++ E +Q + A K GAS + + + +G SV R +I+ +E
Sbjct: 2 KIAENQTALLKAQEQELRQAVSFAVELATKSGAS-AEVAVTKVSGLSVSTRLQEIENVEF 60
Query: 62 NNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENT 121
ND + + +Y+ K GN+STSD + ++ + + AA IA++T+ D+ GL D++
Sbjct: 61 TNDGALGISVYMGQQK----GNASTSDLSEGAIRNAVEAALAIAKYTSPDDCTGLADKDL 116
Query: 122 LEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSH 181
+ + D +LY + +D A +A + E A + I+N+ + + NSH
Sbjct: 117 MAFDAPDLELYHAADVDVDKATELALQAEKAALEADERIINSNGASFNSHTGVKVYGNSH 176
Query: 182 GFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKA 241
G + Y S++ +S S I ++ D Y+ + + KL P +G AK+ +SRL
Sbjct: 177 GMLQSYLSSRYSLSCSVIGGVEDALENDYEYTISREFDKLQSPIWVGENCAKKVVSRLNP 236
Query: 242 KKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPH 301
+K+STR+ PV+F +A L++ FA ISG SLYRKS+FL+D LGK++ I E PH
Sbjct: 237 QKLSTREVPVIFLNDVATGLISHFAAAISGGSLYRKSSFLIDHLGKQVLPDWFNISERPH 296
Query: 302 ILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISN 361
+L S+ FD+EGV+TQ R +V++GI+Q Y +++YS KKL M +TG++GG H+ ++
Sbjct: 297 LLRRLASTPFDSEGVRTQDREIVEDGILQTYLVTSYSGKKLSMPSTGHAGGIHNWLV--- 353
Query: 362 KTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITIS 421
K + L +L++M TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+
Sbjct: 354 KPNLAGGLTALLRQMGTGLLVTDVMGQGVNIVTGDYSRGASGFWVENGEIQYPVAEITIA 413
Query: 422 GKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456
G+LQ+M K +VA+ D+ R++ +GSIL++ M I
Sbjct: 414 GQLQDMLKNMVAVADDIEHRSNIQTGSILLDKMKI 448
>gi|226943402|ref|YP_002798475.1| peptidase U62, modulator of DNA gyrase activity [Azotobacter
vinelandii DJ]
gi|226718329|gb|ACO77500.1| Peptidase U62, modulator of DNA gyrase activity [Azotobacter
vinelandii DJ]
Length = 448
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/442 (37%), Positives = 267/442 (60%), Gaps = 8/442 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E + + +L + + GA+ + + G S VR+G+++ +E N D+ + +Y+
Sbjct: 14 ELRAKVERILAESARQGATACEVSVSIEQGLSTTVRQGEVETVEFNRDQGFGITLYLGQR 73
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS ++++ +T+ AA IAR + D+ AGLPD + + L+ PW
Sbjct: 74 K----GSASTSATGEEAIRETVAAALAIARHASEDDCAGLPDAGLMPDELPELDLFHPWA 129
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
++ + A A CE AF + I N + T + + Q + NSHGF+ GY ++H +S
Sbjct: 130 IAPEQAIERALECEAAAFAADPRIRNADGTSLNSHQGCRVYGNSHGFVGGYASTRHSLSC 189
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA +MQRD WY N + L P+ IG AA+R RL A+ + T + VLF A
Sbjct: 190 VMIAEGEGQMQRDYWYDVNRIGEALADPQTIGRQAAERAARRLGARPVPTCEVSVLFSAE 249
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
LA L F I+G +LYR ++FL +LG+++F + + E PHI + GS++FD +G+
Sbjct: 250 LATGLFGHFIAAITGGNLYRHASFLEGALGEQLFPEWLSLDERPHIPRALGSAAFDADGL 309
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T+ + V+ G + Y L TYS +KLGM +T N+GG H+L + T ++ ++++M
Sbjct: 310 PTRAKHFVEQGRLASYALGTYSGRKLGMPSTANAGGVHNLFV----THGDEDQAALIRRM 365
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLL+TELMG G+N +TGDYS+GA G+W+ENG+IQY V+E+TI+G L++MF++IVA+G+
Sbjct: 366 GRGLLLTELMGQGLNLVTGDYSRGAGGFWVENGEIQYPVQEVTIAGNLRDMFRRIVAVGN 425
Query: 437 DVLTRNSNTSGSILIENMIIAG 458
D+ R++ +GS+L+E M +AG
Sbjct: 426 DLEHRSNICTGSVLVERMTLAG 447
>gi|307544508|ref|YP_003896987.1| PmbA protein [Halomonas elongata DSM 2581]
gi|307216532|emb|CBV41802.1| PmbA protein [Halomonas elongata DSM 2581]
Length = 446
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 162/414 (39%), Positives = 249/414 (60%), Gaps = 9/414 (2%)
Query: 45 NGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNI 104
G V VR+G ++ +E + D+ + V +Y+ K G++S+SD + S+ D + A I
Sbjct: 41 QGIGVSVREGDVETVELSRDQGIAVTVYVGQRK----GSASSSDASEASVRDVVEKALAI 96
Query: 105 ARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNE 164
AR+T D AGL D + D ++ PW LS ++A +A CEN I ++E
Sbjct: 97 ARYTGEDPAAGLADAELMATRFPDLDVHHPWPLSTEEAIELALTCENAGRGVEG-IRSSE 155
Query: 165 NTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQP 224
+++ + + ANSHGF+ G S+H +S IA MQRD Y++ DP+ L P
Sbjct: 156 GASLSSGEGVHVYANSHGFLGGQRGSRHSLSCLLIAEDDAGMQRDYDYTTARDPRALRDP 215
Query: 225 EIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDS 284
+G AA+RT+ RL A + +T + PVLF+ LA L+ I+G +LYR+S+FL +
Sbjct: 216 AAVGESAAQRTLQRLGAGRPATGRMPVLFDPSLASGLVGHLMGAIAGGALYRQSSFLCER 275
Query: 285 LGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGM 344
L +F + E P +G+ SS FD +GV+T+ + V G + Y LS YSA++LGM
Sbjct: 276 LNTMLFPEWFSLSERPMEVGAMASSPFDADGVQTRDNVFVDQGRLASYLLSAYSARRLGM 335
Query: 345 KTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGY 404
TTGN+GGA +L I + ++L+ +L +M+ G+LVTELMG G+N +TGDYS+GA G+
Sbjct: 336 STTGNAGGARNLRIAAPL----ESLETLLARMDRGVLVTELMGQGVNGVTGDYSRGAAGF 391
Query: 405 WIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
W+E+G+IQ+ VEE TI+G L+ MF+ ++ +G D+ TR S +GS LI+ M +AG
Sbjct: 392 WVEDGRIQHPVEEFTIAGNLETMFQGLIGVGDDIDTRGSIHTGSWLIDEMTVAG 445
>gi|269140310|ref|YP_003297011.1| peptidase PmbA [Edwardsiella tarda EIB202]
gi|387868822|ref|YP_005700291.1| TldE/PmbA protein [Edwardsiella tarda FL6-60]
gi|267985971|gb|ACY85800.1| peptidase PmbA [Edwardsiella tarda EIB202]
gi|304560135|gb|ADM42799.1| TldE/PmbA protein [Edwardsiella tarda FL6-60]
Length = 446
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 161/429 (37%), Positives = 258/429 (60%), Gaps = 8/429 (1%)
Query: 31 KIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFC 90
+ GA + + G SV R G+++ +E N+D + + +Y Q K G++S++D
Sbjct: 26 QAGADAAEVAVTRTTGISVSTRFGEVENVEFNSDGALGITVYHQQCK----GSASSTDLS 81
Query: 91 KKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCE 150
++++ T+ AA +IAR+T+ D AG + L D L+ P L+ + A +A E
Sbjct: 82 RQAIARTVQAALDIARYTSPDPCAGPAPRDLLAFEAPDLDLFHPAELNAEQAIALAAEAE 141
Query: 151 NEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDN 210
A + ++ I N E + + NSHG + Y S+H +S IA + +M+RD
Sbjct: 142 QAALSADARITNTEGGSFNSHYGIRVFGNSHGMLQSYCSSRHSLSSCVIAEQNGDMERDY 201
Query: 211 WYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLIS 270
Y+ D L IG A+RT++RL +++ T + PV+F A A L IS
Sbjct: 202 AYTIARDMDDLRSARWIGEECARRTLARLAPRRLPTMQAPVMFAAEAATGLFGHLVGAIS 261
Query: 271 GNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQ 330
G+S+YRKSTFL+DSLG++I S + I E PH+L S+ FD+EGV+T R +V++G++Q
Sbjct: 262 GSSVYRKSTFLLDSLGQQILPSWLTIDEQPHLLRGLASTPFDSEGVRTTPRRIVQDGVLQ 321
Query: 331 GYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGI 390
+ L++YSA+KLG+ +TG++GG H+ I ++ML++M G LVTELMG G+
Sbjct: 322 TWLLTSYSARKLGLHSTGHAGGIHNWRIAGRGL----GFEQMLREMGRGFLVTELMGQGV 377
Query: 391 NYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSIL 450
+ +TGDYS+GA G+W+ENG+IQY V E+TI+G L++M+ +V IG D+ TR++ GS+L
Sbjct: 378 SAVTGDYSRGASGFWVENGEIQYPVSEVTIAGNLRDMWANMVTIGDDIETRSNIQCGSVL 437
Query: 451 IENMIIAGK 459
+++M IAG+
Sbjct: 438 LDSMQIAGE 446
>gi|294634889|ref|ZP_06713410.1| PmbA protein, partial [Edwardsiella tarda ATCC 23685]
gi|291091710|gb|EFE24271.1| PmbA protein [Edwardsiella tarda ATCC 23685]
Length = 402
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 154/409 (37%), Positives = 253/409 (61%), Gaps = 8/409 (1%)
Query: 51 VRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTAS 110
R G+++ +E N+D + + +Y Q K G++S++D +++ T+ AA +IAR+T+
Sbjct: 2 TRFGEVENVEFNSDGALGITVYHQQRK----GSASSTDLSPQAIARTVQAALDIARYTSP 57
Query: 111 DNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTT 170
D +AG + L D L+ P L D A +A E A + ++ I N E +
Sbjct: 58 DPYAGPAEAALLAFEAPDLDLFHPAELDADRAIALAAEAERVALSADARISNTEGGSFNS 117
Query: 171 QQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFY 230
+ NSHG + Y S+H +S IA + +M+RD Y+ D +L + +G
Sbjct: 118 HYGIRVFGNSHGMLQSYCSSRHSLSSCVIAEQEGDMERDYAYTIARDMAELRSAQWVGEE 177
Query: 231 AAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIF 290
A+RT++RL +++ T + PV+F A +A L ISG+S+YRKSTFL+DSLG++I
Sbjct: 178 CARRTLARLAPRRLPTMQAPVMFAAEVATGLFGHLVGAISGSSVYRKSTFLLDSLGQQIL 237
Query: 291 SSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNS 350
+ + I E PH+L S+ FD+EGV+T R +V++G++Q + L++YSA+KLG+ +TG++
Sbjct: 238 PAWLTIEEQPHLLRGLASTPFDSEGVRTTPRHIVQDGVLQTWLLTSYSARKLGLHSTGHA 297
Query: 351 GGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGK 410
GG H+ I + ++M+++M G LVTELMG G++ +TGDYS+GA G+W+ENG+
Sbjct: 298 GGIHNWRIAGRGL----DFQQMVREMGRGFLVTELMGQGVSTVTGDYSRGASGFWVENGE 353
Query: 411 IQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IQY V E+TI+G L++M+ +V IG D+ TR++ GS+L+++M IAG+
Sbjct: 354 IQYPVSEVTIAGNLRDMWANMVTIGDDIETRSNIQCGSVLLDSMKIAGE 402
>gi|244539375|dbj|BAH83418.1| predicted peptidase [Candidatus Ishikawaella capsulata Mpkobe]
Length = 446
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 176/447 (39%), Positives = 265/447 (59%), Gaps = 13/447 (2%)
Query: 16 SEFQQLAQDMLNYA---KKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIY 72
+E ++L ++ + A ++ A + ++ G +V R G + IE NND + + +Y
Sbjct: 8 AEQRKLLEEAVKQALELAQVNAVSIEVGVSKTTGINVSTRYGIAENIEFNNDGVLGITVY 67
Query: 73 IQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLY 132
+ K G++S++D ++ T+ AA +IA T+ D F+GL + N L + LY
Sbjct: 68 KNNCK----GSASSNDISYPAINRTLQAAIDIACSTSPDIFSGLAEANLLAYEAPELDLY 123
Query: 133 TPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKH 192
PW I +A +A E A + I+N E ++ + NSHG + Y S H
Sbjct: 124 HPWLGEISEAIELAACAEQTALKSDKRIINTEGGNFSSHVNIKAFGNSHGMLQSYCSSNH 183
Query: 193 IISISPIAIKGK-EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPV 251
+IS IA KGK M+RD Y+ + +L P+ +G A+R ISRL+A+K++T K PV
Sbjct: 184 VISSCVIA-KGKVGMERDYAYTISRVIDELKSPQWVGTECAQRAISRLEARKLTTMKSPV 242
Query: 252 LFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSF 311
+F A +A L ISGNS+Y KST L+DSL K+I + + I E PHI S F
Sbjct: 243 VFSAEVAPSLFGHLTAAISGNSVYHKSTLLLDSLKKQIMPAWLNITEKPHIYRGLASVPF 302
Query: 312 DNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKE 371
D EGV TQ+R +VKNGI+Q + L++Y+A+KL + +TG++GG + + + +LK+
Sbjct: 303 DAEGVLTQRRSIVKNGILQTWILASYAARKLNLHSTGHAGGISNWFV----SGPEYSLKD 358
Query: 372 MLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQI 431
+L +MNTGLLVTEL+G G+N ITGDYS+GA G+W+E G+IQY+V EITI G L+ M+ I
Sbjct: 359 ILGQMNTGLLVTELLGQGVNIITGDYSRGAAGFWVEKGEIQYAVNEITIVGNLREMWSSI 418
Query: 432 VAIGSDVLTRNSNTSGSILIENMIIAG 458
IG+D+ TR++ GS+LI M IAG
Sbjct: 419 AMIGNDIETRSNIQCGSVLIPEMNIAG 445
>gi|308051157|ref|YP_003914723.1| microcin-processing peptidase 1 [Ferrimonas balearica DSM 9799]
gi|307633347|gb|ADN77649.1| microcin-processing peptidase 1 [Ferrimonas balearica DSM 9799]
Length = 445
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 170/441 (38%), Positives = 256/441 (58%), Gaps = 8/441 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+Q L+ AK +G + + ++ G SV R G+++ +E N D + + +Y + K
Sbjct: 12 LEQAVACALDAAKALGLDGAEVAIHKQQGLSVSTRGGEVETVEFNKDGALGISVYREGAK 71
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
GN+STSD ++++ + AA IA T +D F GL D + + + + LY P
Sbjct: 72 ----GNASTSDLSEEAIRAAVKAAATIAAQTTADRFNGLADADRMPTSLPELDLYHPESF 127
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + +A RCE A + IV ++ + + + NSHGF+ Y S+H +S
Sbjct: 128 TPEQGAELASRCEAAAMAADPRIVTSDGASFNSHEGIKVYGNSHGFIGSYASSRHSLSCV 187
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
I + M+RD Y+ + L PE +G A T +RL A+KI T + PVLF A
Sbjct: 188 VIGQDEQGMERDYDYTVARRFQDLASPEQVGRQAGLDTAARLSARKIGTCQVPVLFSADQ 247
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A LL ISG SLYR ++FL DSL ++F I E+PH+ + S+ FD EGV
Sbjct: 248 ATGLLGHLVGAISGASLYRDASFLKDSLDTQLFPEWFSIEENPHLAMALASAPFDGEGVA 307
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
TQ R +V++G+++ Y L+ YSA++LGM TG++GG ++ + N +L MLK+M
Sbjct: 308 TQARDIVRDGVLKSYLLTAYSARRLGMTNTGHAGGIYNWQVKRN----GGDLAAMLKQMG 363
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGL VTELMG G+N +TGDYS+GA G+W+E+G+IQY V EITI+G L+ M++ +VAIGSD
Sbjct: 364 TGLYVTELMGQGVNGVTGDYSRGAAGFWVESGEIQYPVHEITIAGNLKQMYRSMVAIGSD 423
Query: 438 VLTRNSNTSGSILIENMIIAG 458
V R+S +G IL++ M IAG
Sbjct: 424 VDPRHSLQTGPILLDTMKIAG 444
>gi|417840926|ref|ZP_12487034.1| Protein pmbA [Haemophilus haemolyticus M19501]
gi|341950737|gb|EGT77324.1| Protein pmbA [Haemophilus haemolyticus M19501]
Length = 451
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 273/447 (61%), Gaps = 11/447 (2%)
Query: 15 KSEFQQLAQDM---LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVII 71
K++ Q+L Q + + A K GAS + + + +G SV R +I+ +E ND + + +
Sbjct: 12 KAQEQELRQAVSFAVELATKAGAS-AEVAVTKVSGLSVSTRLQEIENVEFTNDGALGISV 70
Query: 72 YIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKL 131
Y+ K GN+STSD + ++ + + AA IA++T+ D+ GL D++ + + D +L
Sbjct: 71 YMGQQK----GNASTSDLSESAIKNAVEAALAIAKYTSPDDCTGLADKDLMAFDAPDLEL 126
Query: 132 YTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSK 191
Y + +D A +A + E A + I+N+ + + NSHG + Y S+
Sbjct: 127 YHAADVDVDKATELALQAEKAALQADERIINSNGASFNSHTGVKVYGNSHGMLQSYLSSR 186
Query: 192 HIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPV 251
+ +S S I ++ D Y+ + + KL P +G AK+ +SRL +K+STR+ PV
Sbjct: 187 YSLSCSVIGGVEDALENDYEYTISREFDKLQSPIWVGENCAKKVVSRLNPQKLSTREVPV 246
Query: 252 LFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSF 311
+F +A L++ FA ISG SLYRKS+FL+D L K++ I E PH+L S+ F
Sbjct: 247 IFLNDVATGLISHFAAAISGGSLYRKSSFLLDHLDKQVLPDWFNISERPHLLRRLASTPF 306
Query: 312 DNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKE 371
D+EGV+TQ R +V+ GI+Q Y +++YS KKLGM +TG++GG H+ ++ K + L
Sbjct: 307 DSEGVRTQDREIVEGGILQTYLVTSYSGKKLGMPSTGHAGGIHNWLV---KPNLNGGLTA 363
Query: 372 MLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQI 431
+L++M TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+LQ+M K +
Sbjct: 364 LLRQMGTGLLVTDVMGQGVNIVTGDYSRGASGFWVENGEIQYPVAEITIAGQLQDMLKNM 423
Query: 432 VAIGSDVLTRNSNTSGSILIENMIIAG 458
VA+ D+ R++ +GSIL++ + I+G
Sbjct: 424 VAVADDIEHRSNIQTGSILLDKIKISG 450
>gi|422015699|ref|ZP_16362294.1| peptidase PmbA [Providencia burhodogranariea DSM 19968]
gi|414097968|gb|EKT59619.1| peptidase PmbA [Providencia burhodogranariea DSM 19968]
Length = 446
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 166/445 (37%), Positives = 274/445 (61%), Gaps = 9/445 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ + + L++AK + + N+ G SV R+G+++ +E N+D + + +Y
Sbjct: 11 RKKLEDAVAQALSFAKSR-CDAAEVAVNKSTGISVSTRQGEVENVEFNSDGALGITVYHN 69
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K G++S++D +++ T+ AA +IAR+T+ D +AG +++ L + + +L+
Sbjct: 70 QRK----GSASSTDLSPEAIERTVQAAVDIARYTSEDPYAGPAEKSLLAFDSPELQLFQA 125
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
++ +DA +A + E A +S IVN E + NSHG + Y S++ +
Sbjct: 126 SEITPEDAIKLASQAEMAALAVDSRIVNTEGGSFNGHYGVRVFGNSHGMLQSYCSSRYSM 185
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S IA + EM+RD Y+ L E +G A+RT++RL +K+ T K PV+F
Sbjct: 186 SSSVIAEQNGEMERDYAYTIGRSLSALQSAEWVGQECARRTLARLSPRKLPTMKAPVIFA 245
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
+ +A L ISG+S+YRKS+FL+DSLGK+I + I E PH++G SS FD+E
Sbjct: 246 SEVATGLFGHLVGAISGSSIYRKSSFLLDSLGKQILPEWLTINEQPHLIGGLASSPFDSE 305
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+T +R +++NG++Q + +++YSA+KLG+++TG++GG H+ I+ + S D L LK
Sbjct: 306 GVRTTERNIIENGVLQTWLMTSYSARKLGLQSTGHAGGIHNW-RIAGQGLSFDAL---LK 361
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L++M+ +V +
Sbjct: 362 QMGTGLVVTELMGQGVSGITGDYSRGASGFWVENGEIQYPVSEITIAGNLKDMWLNMVTV 421
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
D+ TR++ GS+L+ M IAG+
Sbjct: 422 ADDIETRSNIQCGSVLLPEMSIAGQ 446
>gi|417345748|ref|ZP_12125786.1| TldE/PmbA protein, partial [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|357952554|gb|EHJ79451.1| TldE/PmbA protein, partial [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
Length = 377
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 153/380 (40%), Positives = 237/380 (62%), Gaps = 8/380 (2%)
Query: 63 NDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTL 122
+D + + +Y Q+ K G++S++D +++ T+ AA +IAR+T+ D AG+ D+ L
Sbjct: 3 SDGALGITVYHQNRK----GSASSTDLSPQAIARTVQAALDIARYTSPDPCAGVADKELL 58
Query: 123 EMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHG 182
+ D L+ P ++ D+A +A R E + + I N E + + NSHG
Sbjct: 59 AFDAPDLDLFHPAEVTPDEAIELAARAEQASLKADKRITNTEGGSFNSHYGIKVFGNSHG 118
Query: 183 FMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAK 242
+ GY ++H +S IA + +M+RD Y+ L PE +G A+RT+SRL +
Sbjct: 119 MLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGRAMADLQAPEWVGAECARRTLSRLSPR 178
Query: 243 KISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHI 302
K+ST K PV+F +A L I+G ++YRKSTFL+DSLGK+I + I E PH+
Sbjct: 179 KLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYRKSTFLLDSLGKQILPEWLTIEEHPHL 238
Query: 303 LGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNK 362
L SS FD+EGV+T++R +VK+G++ + L+ YSA+KLG+K+TG++GG H+ I
Sbjct: 239 LKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTNYSARKLGLKSTGHAGGIHNWRIAGQG 298
Query: 363 TKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISG 422
N +++LK+M TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G
Sbjct: 299 L----NFEQLLKEMGTGLVVTELMGQGVSGITGDYSRGAAGFWVENGEIQYPVSEITIAG 354
Query: 423 KLQNMFKQIVAIGSDVLTRN 442
L+ M++ IV +G D+ TR+
Sbjct: 355 NLKEMWRNIVTVGDDIETRS 374
>gi|269104085|ref|ZP_06156782.1| PmbA protein [Photobacterium damselae subsp. damselae CIP 102761]
gi|268163983|gb|EEZ42479.1| PmbA protein [Photobacterium damselae subsp. damselae CIP 102761]
Length = 447
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 172/454 (37%), Positives = 272/454 (59%), Gaps = 12/454 (2%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
R + + E + L A + A + + N+ G SV R +++ +E N+D +
Sbjct: 4 REQVAQQRVELEAAVAKALEMAGQ-KADAAEVAINKTTGISVSTRLSEVENVEFNSDGAL 62
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
+ +Y + G++STSD + ++ T+ AA +IA +T+ D FAG + + +
Sbjct: 63 GITVY----RGQRKGSASTSDLSENAIAQTVAAALDIASYTSEDPFAGPGPKELMAKDIP 118
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ P D A IA E A ++ I ++ + + NSHG ++ Y
Sbjct: 119 DLDLFHPDEPEPDRAAEIAIAAEEAAMAYDPRIKQSDGASYDSHYGIRVYGNSHGMLASY 178
Query: 188 PFSKHIISISPIAIKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
S+H IS IA +GK EM+RD Y++ + PE +G +AA+RT+ R+ A+K+S
Sbjct: 179 ASSRHSISCCVIA-QGKNGEMERDYSYTTARRACDMWTPEKVGRHAAERTVGRVDAQKLS 237
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
TR+ PV+F A +A L ISG +LYRKS+FL+D LG++IF + + I E PHIL
Sbjct: 238 TREAPVMFAADIATGLFGHLVMGISGANLYRKSSFLLDKLGEEIFPNWLNISERPHILRG 297
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
S+ FD+EG+ T+ ++K+G + Y L++Y+A+K+ + TG++GG H+ ++ S +
Sbjct: 298 MASTPFDSEGLATKDLEIIKDGQLATYLLTSYAARKMNRQPTGHAGGIHNWLVSS----T 353
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
+N +MLKKM+ GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V EITI+G L
Sbjct: 354 GENFTQMLKKMDRGLLVTELMGQGVNIVTGDYSRGAAGFWVENGEIQFPVSEITIAGNLA 413
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+M K IVA+GSD+ TR+ +GSIL+++M IAG+
Sbjct: 414 DMMKNIVAVGSDIETRSQIQTGSILLDSMKIAGE 447
>gi|238921235|ref|YP_002934750.1| TldD/PmbA family [Edwardsiella ictaluri 93-146]
gi|238870804|gb|ACR70515.1| TldD/PmbA family [Edwardsiella ictaluri 93-146]
Length = 446
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 160/429 (37%), Positives = 257/429 (59%), Gaps = 8/429 (1%)
Query: 31 KIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFC 90
+ GA + + G SV R G+++ +E N+D + + +Y Q K G++S++D
Sbjct: 26 QAGADAAEVAVTRTTGISVSTRFGEVENVEFNSDGALGITVYHQQCK----GSASSTDLS 81
Query: 91 KKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCE 150
+++ T+ AA +IAR+T+ D AG + L D L+ P L+ + A +A E
Sbjct: 82 PQAIARTVQAALDIARYTSPDPCAGPASRDLLAFEAPDLDLFHPSELNAEQAIALAAEAE 141
Query: 151 NEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDN 210
A ++ I N E + + NSHG + Y S+H +S IA + +M+RD
Sbjct: 142 QAALGADARITNTEGGSFNSHYGIRVFGNSHGMLQSYCSSRHSLSSCVIAEQDGDMERDY 201
Query: 211 WYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLIS 270
Y+ D L +G A+RT++RL +++ T + PV+F A A L IS
Sbjct: 202 AYTIARDMDDLRSARWVGEECARRTLARLAPRRLPTMQVPVMFAAEAATGLFGHLVGAIS 261
Query: 271 GNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQ 330
G+S+YRKSTFL+DSLG++I S + I E PH+L + S+ FD+EGV+T R +V++G++Q
Sbjct: 262 GSSVYRKSTFLLDSLGQQILPSWLTIDEQPHLLRALASTPFDSEGVRTTPRRIVQDGVLQ 321
Query: 331 GYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGI 390
+ L++YSA+KLG+ +TG++GG H+ I ++ML++M G LVTELMG G+
Sbjct: 322 TWLLTSYSARKLGLHSTGHAGGIHNWRIAGRGL----GFEQMLREMGRGFLVTELMGQGV 377
Query: 391 NYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSIL 450
+ +TGDYS+GA G+W+ENG+IQY V E+TI+G L++M+ +V IG D+ TR++ GS+L
Sbjct: 378 SAVTGDYSRGASGFWVENGEIQYPVSEVTIAGNLRDMWANMVTIGDDIETRSNIQCGSVL 437
Query: 451 IENMIIAGK 459
+++M IAG+
Sbjct: 438 LDSMQIAGE 446
>gi|419801764|ref|ZP_14326978.1| protein PmbA [Haemophilus parainfluenzae HK262]
gi|385193143|gb|EIF40524.1| protein PmbA [Haemophilus parainfluenzae HK262]
Length = 451
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 165/448 (36%), Positives = 279/448 (62%), Gaps = 13/448 (2%)
Query: 15 KSEFQQLAQDMLNYA----KKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
KS+ Q L +D +++A +K GA+ + + + +G SV R +I+ +E +D + +
Sbjct: 12 KSQEQTL-RDAVSFAIETAQKAGAT-AEVGVTKVSGLSVSTRLQEIENVEFTSDGALGIS 69
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ K GN+STSD ++++ +T+ AA IA++T+ D+ GL D+ + D
Sbjct: 70 VYLGQQK----GNASTSDLSEEAIKNTVEAALAIAKYTSPDDCTGLADKELMAFEAPDLA 125
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY + ++ A +A E A +++ IVN+ + + N+HG + Y S
Sbjct: 126 LYHSANVDVEQATKLALEAEKAALEYDAKIVNSNGASFNSHTGVRVYGNTHGMLQSYLSS 185
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
++ +S S I + +++ D Y+ + + K L P+ +G AK+ I+RL +K++TR+ P
Sbjct: 186 RYSLSCSVIGGELDQLENDYEYTVSREFKALSLPDWVGQNCAKKVIARLNPQKLTTREVP 245
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F +A L++ ISG SLYRKS+FL+D LGK++ QI E PH+L S+
Sbjct: 246 VIFLNDVATGLISHLTGAISGGSLYRKSSFLLDHLGKQVLPDWFQISERPHLLKRLASTP 305
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGV+TQ ++++G++Q Y L++YS +K+GM++TG++GG H+ ++ N T L
Sbjct: 306 FDSEGVRTQDLEIIQDGVLQTYLLTSYSGRKMGMQSTGHAGGIHNWLVKPNLT---GGLT 362
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+L++M+TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+LQ+M K
Sbjct: 363 ALLRQMSTGLLVTDVMGQGVNIVTGDYSRGAAGFWVENGEIQYPVAEITIAGQLQDMLKN 422
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I+A+ D+ R++ +GSIL+ M I+G
Sbjct: 423 IIAVSDDIEHRSNIQTGSILLNKMKISG 450
>gi|419845839|ref|ZP_14369102.1| protein PmbA [Haemophilus parainfluenzae HK2019]
gi|386414877|gb|EIJ29419.1| protein PmbA [Haemophilus parainfluenzae HK2019]
Length = 451
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 165/448 (36%), Positives = 278/448 (62%), Gaps = 13/448 (2%)
Query: 15 KSEFQQLAQDMLNYA----KKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
KS+ Q L +D +++A +K GA+ + + + +G SV R +I+ +E ND + +
Sbjct: 12 KSQEQTL-RDAVSFAIETAQKAGAT-AEVGVTKVSGLSVSTRLQEIENVEFTNDGALGIS 69
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ K GN+STSD ++++ +T++AA IA++T+ D+ GL D+ + D
Sbjct: 70 VYLGQQK----GNASTSDLSEEAIKNTVDAALAIAKYTSPDDCTGLADKELMAFEAPDLA 125
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY + ++ A +A E A +++ IVN+ + + N+HG + Y S
Sbjct: 126 LYHSANVDVEQATKLALEAEKAALEYDAKIVNSNGASFNSHTGVRVYGNTHGMLQSYLSS 185
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
++ +S S I + +++ D Y+ + + L + +G AK+ I+RL +K++TR+ P
Sbjct: 186 RYSLSCSVIGGELDQLENDYEYTVSREFDALSSADWVGQNCAKKVIARLNPQKLTTREVP 245
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F +A L++ ISG SLYRKS+FL+D LGK++ QI E PH+L S+
Sbjct: 246 VIFLNDVATGLISHLTGAISGGSLYRKSSFLLDHLGKQVLPDWFQISERPHLLKRLASTP 305
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGV+TQ ++++G++Q Y L++YS +K+GM++TG++GG H+ ++ N T L
Sbjct: 306 FDSEGVRTQNLEIIQDGVLQTYLLTSYSGRKMGMQSTGHAGGIHNWLVKPNLTG---GLT 362
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+L++M TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+LQ+M K
Sbjct: 363 ALLRQMGTGLLVTDIMGQGVNIVTGDYSRGAAGFWVENGEIQYPVAEITIAGQLQDMLKN 422
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IVA+ D+ R++ +GSIL++ M I+G
Sbjct: 423 IVAVADDIEHRSNIQTGSILLDKMKISG 450
>gi|157963552|ref|YP_001503586.1| peptidase U62 modulator of DNA gyrase [Shewanella pealeana ATCC
700345]
gi|157848552|gb|ABV89051.1| peptidase U62 modulator of DNA gyrase [Shewanella pealeana ATCC
700345]
Length = 460
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 161/433 (37%), Positives = 262/433 (60%), Gaps = 8/433 (1%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YAK +G S + + ++ G SV R +++ +E N D + + ++ +DG K G+SS
Sbjct: 35 LEYAKTLGTSGAEVAISKQQGLSVSTRMKEVETVEFNKDGALGITVF-RDGCK---GSSS 90
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD ++ + AA +IARFT++D + GL D++ + + LY P +S ++ +
Sbjct: 91 TSDLSPAAIQQAVKAANDIARFTSADPYNGLADKSLMATEFPELDLYHPQEISPEELTHL 150
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE 205
A E A + + + ++ S + NSHGF++G+ S++ +S I
Sbjct: 151 AVLAEEAALDTDPRVKTSDGASANAHSSVKVYGNSHGFLNGFCSSRYSLSCVAIGEHEGG 210
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
MQRD Y+ + ++ PEIIG AA++T RL +KI+T + PVLF +A L+
Sbjct: 211 MQRDYDYTISRKFSEMVAPEIIGKKAAEKTAGRLGGRKIATTQLPVLFSPEIATGLIGHL 270
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
ISG SLYRKS+FL+D++ ++F I EDP ++G+ SS++D+EGV TQ R ++
Sbjct: 271 VGAISGGSLYRKSSFLLDAIDTQVFPDWFSIHEDPLLVGALASSAYDSEGVATQARDIID 330
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
NG + Y L++YSA+KLG+ TG++GG ++ + + + +++K+M TGL+VTE+
Sbjct: 331 NGRLATYLLTSYSARKLGLTNTGHAGGIYNWTL----STTGQTFDQLVKEMGTGLIVTEV 386
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
MG G+N +TGDYS+GA G+++ENG I Y VEEITI+G L++MF+ I+ + D R+S
Sbjct: 387 MGQGVNTVTGDYSRGAAGFYVENGVILYPVEEITIAGNLKDMFQNILGVAKDRDLRSSIR 446
Query: 446 SGSILIENMIIAG 458
+G IL++ M IAG
Sbjct: 447 TGGILMDKMKIAG 459
>gi|342904158|ref|ZP_08725960.1| Protein pmbA [Haemophilus haemolyticus M21621]
gi|341954167|gb|EGT80661.1| Protein pmbA [Haemophilus haemolyticus M21621]
Length = 409
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 162/414 (39%), Positives = 257/414 (62%), Gaps = 7/414 (1%)
Query: 45 NGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNI 104
+G SV R +I+ +E ND + + +Y+ K GN+STSD + ++ + + AA I
Sbjct: 2 SGLSVSTRLQEIENVEFTNDGALGISVYMGQQK----GNASTSDLSEGAIRNAVEAALAI 57
Query: 105 ARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNE 164
A++T+ D+ GL D++ + + D +LY + +D A +A + E A + I+N+
Sbjct: 58 AKYTSPDDCTGLADKDLMAFDAPDLELYHAADVDVDKATELALQAEKAALEADEHIINSN 117
Query: 165 NTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQP 224
+ + NSHG + Y S++ +S S I ++ D Y+ + + KL P
Sbjct: 118 GASFNSHTGVKVYGNSHGMLQSYLSSRYSLSCSVIGGGEDALENDYEYTISREFDKLQSP 177
Query: 225 EIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDS 284
+G AK+ +SRL +K+STR+ PV+F +A L++ FA ISG SLYRKS+FL+D
Sbjct: 178 IWVGENCAKKVVSRLNPQKLSTREVPVIFLNDVATGLISHFAAAISGGSLYRKSSFLLDH 237
Query: 285 LGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGM 344
LGK++ I E PH+L S+ FD+EGV+TQ R +V+ GI+Q Y +++YS KKLGM
Sbjct: 238 LGKQVLPDWFNISERPHLLRRLASTPFDSEGVRTQDREIVEGGILQTYLVTSYSGKKLGM 297
Query: 345 KTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGY 404
+TG++GG H+ ++ K + L +L++M TGLLVT++MG G+N +TGDYS+GA G+
Sbjct: 298 PSTGHAGGIHNWLV---KPNLAGGLTALLRQMGTGLLVTDVMGQGVNIVTGDYSRGASGF 354
Query: 405 WIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
W+ENG+IQY V EITI+G+LQ+M K +VA+ D+ R++ +GSIL++ M I+G
Sbjct: 355 WVENGEIQYPVAEITIAGQLQDMLKNMVAVADDIEHRSNIQTGSILLDKMKISG 408
>gi|417949185|ref|ZP_12592323.1| peptidase PmbA [Vibrio splendidus ATCC 33789]
gi|342808579|gb|EGU43728.1| peptidase PmbA [Vibrio splendidus ATCC 33789]
Length = 447
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 171/451 (37%), Positives = 269/451 (59%), Gaps = 18/451 (3%)
Query: 19 QQLAQDMLNYAKKIG---------ASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNV 69
QQ+AQ ++ + A + + + G SV R +++ +E N+D + +
Sbjct: 5 QQVAQQRVDLEAAVAKALDMASVSADAAEVAITKSTGLSVSTRMCEVENVEFNSDGALGI 64
Query: 70 IIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDF 129
+Y G+K G++STSD +K++ T+ AA +IA++T+ D FAG + + D
Sbjct: 65 TVY--RGQKK--GSASTSDLSEKAIAQTVAAALDIAQYTSEDPFAGPAAKEYMVKEVPDL 120
Query: 130 KLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPF 189
L+ P + D A IA E +A +++ I ++ + + NSHG ++ Y
Sbjct: 121 DLFHPDEPNPDYAAEIAIAAEKQALSYSDKIKQSDGASYDSHYGVKVYGNSHGLLASYAS 180
Query: 190 SKHIISISPIAIKGK-EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
S+H S I EM+RD Y+ +L PE +G AA++TISRL AKK++T +
Sbjct: 181 SRHSTSCCVIGEGANGEMERDYSYTVARHRDELWTPERVGQEAAEKTISRLDAKKLATGQ 240
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
P++F +A L+ ISG +LYRK++FL+D LG+KI I E PHIL S
Sbjct: 241 YPIMFANDVATGLVGHLVMAISGGNLYRKASFLLDHLGQKILPDWFNISERPHILRGLAS 300
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
S FD+EGV TQ R ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S + N
Sbjct: 301 SPFDSEGVLTQDREIITDGVLATYLLTSYAARKMDMTPTGHAGGIHNWFVKS----TGQN 356
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
++MLK++ TG LVTE+MG G+N +TGDYS+GA G+W+ENG+IQY V E+TI+G L++MF
Sbjct: 357 FEQMLKELGTGFLVTEVMGQGVNTVTGDYSRGAAGFWVENGEIQYPVSEVTIAGNLKDMF 416
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
QIVA+G+DV TR+ +GSIL+E+M +AG+
Sbjct: 417 NQIVAVGNDVETRSQIQTGSILLESMKVAGE 447
>gi|84387801|ref|ZP_00990816.1| PmbA protein [Vibrio splendidus 12B01]
gi|84377316|gb|EAP94184.1| PmbA protein [Vibrio splendidus 12B01]
Length = 447
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 171/453 (37%), Positives = 268/453 (59%), Gaps = 10/453 (2%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
+ + + E + L+ A + A + + + G SV R +++ +E N+D +
Sbjct: 4 KQQVAQQRVELEAAVAKALDMAS-VSADAAEVAITKSTGLSVSTRMCEVENVEFNSDGAL 62
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
+ +Y G+K G++STSD +K++ T+ AA +IA++T+ D FAG + +
Sbjct: 63 GITVY--RGQKK--GSASTSDLSEKAIAQTVAAALDIAQYTSEDPFAGPAAKEYMVKEIP 118
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ P + D A IA E +A ++ I ++ + + NSHG ++ Y
Sbjct: 119 DLDLFHPDEPNPDYAAEIAIAAEKQALAYSDKIKQSDGASYDSHYGVKVYGNSHGLLASY 178
Query: 188 PFSKHIISISPIAIKGK-EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
S+H S I EM+RD Y+ +L PE +G AA++TISRL AKK+ T
Sbjct: 179 ASSRHSTSCCVIGQGANGEMERDYSYTVARHRDELWAPERVGQEAAEKTISRLDAKKLPT 238
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
+ P++F +A L+ ISG +LYRKS+FL+D LG+KI I E PHIL
Sbjct: 239 GQYPIMFANDVATGLIGHLVMAISGGNLYRKSSFLLDHLGQKILPDWFNISERPHILRGL 298
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
SS FD+EGV TQ R ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S +
Sbjct: 299 ASSPFDSEGVYTQDREIITDGVLATYLLTSYAARKMDMTPTGHAGGIHNWFVKS----TG 354
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
N ++MLK++ TG LVTE+MG G+N +TGDYS+GA G+W+ENG+IQY V E+TI+G L++
Sbjct: 355 QNFEQMLKELGTGFLVTEVMGQGVNTVTGDYSRGAAGFWVENGEIQYPVSEVTIAGNLKD 414
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
MF QIVA+G+DV TR+ +GSIL+E+M +AG+
Sbjct: 415 MFTQIVAVGNDVETRSQIQTGSILLESMKVAGE 447
>gi|417839466|ref|ZP_12485647.1| Protein pmbA [Haemophilus haemolyticus M19107]
gi|341952748|gb|EGT79268.1| Protein pmbA [Haemophilus haemolyticus M19107]
Length = 409
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/414 (39%), Positives = 257/414 (62%), Gaps = 7/414 (1%)
Query: 45 NGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNI 104
+G SV R +I+ +E ND + + +Y+ K GN+STSD + ++ + + AA I
Sbjct: 2 SGLSVSTRLQEIENVEFTNDGALGISVYMGQQK----GNASTSDLSEGAIRNAVEAALAI 57
Query: 105 ARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNE 164
A++T+ D+ GL D++ + + D +LY + +D A +A + E A + I+N+
Sbjct: 58 AKYTSPDDCTGLADKDLMAFDAPDLELYHAADMDVDKATELALQAEKAALEADERIINSN 117
Query: 165 NTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQP 224
+ + NSHG + Y S++ +S S I ++ D Y+ + + KL P
Sbjct: 118 GASFNSHTGVKVYGNSHGMLQSYLSSRYSLSCSVIGGVEDALENDYEYTISREFDKLQSP 177
Query: 225 EIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDS 284
+G AK+ +SRL +K+STR+ PV+F +A L++ FA ISG SLYRKS+FL++
Sbjct: 178 IWVGENCAKKVVSRLNPQKLSTREVPVIFLNDVATGLISHFAAAISGGSLYRKSSFLLEH 237
Query: 285 LGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGM 344
LGK++ I E PH+L S+ FD+EGV+TQ R +V+ GI+Q Y +++YS KKLGM
Sbjct: 238 LGKQVLPDWFNISERPHLLRRLASTPFDSEGVRTQDREIVEGGILQTYLVTSYSGKKLGM 297
Query: 345 KTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGY 404
+TG++GG H+ ++ N T L +L++M TGLLVT++MG G+N +TGDYS+GA G+
Sbjct: 298 PSTGHAGGIHNWLVKPNLTG---GLTALLRQMRTGLLVTDVMGQGVNIVTGDYSRGASGF 354
Query: 405 WIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
W+ENG+IQY V EITI+G+LQ+M K +VA+ D+ R++ +GSIL++ M I+G
Sbjct: 355 WVENGEIQYPVAEITIAGQLQDMLKNMVAVADDIEYRSNIQTGSILLDKMKISG 408
>gi|345429876|ref|YP_004822994.1| peptidase required for the maturation and secretion of the
antibiotic peptide MccB17 [Haemophilus parainfluenzae
T3T1]
gi|301155937|emb|CBW15407.1| predicted peptidase required for the maturation and secretion of
the antibiotic peptide MccB17 [Haemophilus
parainfluenzae T3T1]
Length = 451
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/448 (36%), Positives = 277/448 (61%), Gaps = 13/448 (2%)
Query: 15 KSEFQQLAQDMLNYA----KKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
KS+ Q L +D +++A +K GA+ + + + +G SV R +I+ +E ND + +
Sbjct: 12 KSQEQTL-RDAVSFAIETAQKAGAT-AEVGVTKVSGLSVSTRLQEIENVEFTNDGALGIS 69
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ K GN+STSD ++++ +T+ AA IA++T+ D+ GL D+ + D
Sbjct: 70 VYLGQQK----GNASTSDLSEEAIKNTVEAALAIAKYTSPDDCTGLADKELMAFEAPDLA 125
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY + ++ A +A E A +++ IVN+ + + N+HG + Y S
Sbjct: 126 LYHSANVDVEQATKLALEAEKSALEYDAKIVNSNGASFNSHTGVRVYGNTHGMLQSYLSS 185
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
++ +S S I + +++ D Y+ + + L + +G AK+ I+RL +K++TR+ P
Sbjct: 186 RYSLSCSVIGGELDQLENDYEYTVSREFDALSSADWVGQNCAKKVIARLNPQKLTTREVP 245
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F +A L++ ISG SLYRKS+FL+D LGK++ QI E PH+L S+
Sbjct: 246 VIFLNDVATGLISHLTGAISGGSLYRKSSFLLDHLGKQVLPDWFQISERPHLLKRLASTP 305
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGV+TQ ++++G++Q Y L++YS +K+GM++TG++GG H+ ++ N T L
Sbjct: 306 FDSEGVRTQNLEIIQDGVLQTYLLTSYSGRKMGMQSTGHAGGIHNWLVKPNLTG---GLT 362
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+L++M TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+LQ+M K
Sbjct: 363 ALLRQMGTGLLVTDVMGQGVNIVTGDYSRGAAGFWVENGEIQYPVAEITIAGQLQDMLKN 422
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
IVA+ D+ R++ +GSIL++ M I+G
Sbjct: 423 IVAVADDIEHRSNIQTGSILLDKMKISG 450
>gi|218710683|ref|YP_002418304.1| peptidase PmbA [Vibrio splendidus LGP32]
gi|218323702|emb|CAV20046.1| Protein pmbA [Vibrio splendidus LGP32]
Length = 447
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 171/453 (37%), Positives = 268/453 (59%), Gaps = 10/453 (2%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
+ + + E + L+ A + A + + + G SV R +++ +E N+D +
Sbjct: 4 KQQVAQQRVELEAAVAKALDMAS-VSADAAEVAITKSTGLSVSTRMCEVENVEFNSDGAL 62
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
+ +Y G+K G++STSD +K++ T+ AA +IA++T+ D FAG + +
Sbjct: 63 GITVY--RGQKK--GSASTSDLSEKAIAQTVAAALDIAQYTSEDPFAGPAAKEYMVKEIP 118
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ P + D A IA E +A ++ I ++ + + NSHG ++ Y
Sbjct: 119 DLDLFHPDEPNPDYAAEIAIAAEKQALAYSDKIKQSDGASYDSHYGVKVYGNSHGLLASY 178
Query: 188 PFSKHIISISPIAIKGK-EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
S+H S I EM+RD Y+ +L PE +G AA++TISRL AKK+ T
Sbjct: 179 ASSRHSTSCCVIGQGANGEMERDYSYTVARHRDELWTPERVGQEAAEKTISRLDAKKLPT 238
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
+ P++F +A L+ ISG +LYRKS+FL+D LG+KI I E PHIL
Sbjct: 239 GQYPIMFANDVATGLIGHLVMAISGGNLYRKSSFLLDHLGQKILPDWFNISERPHILRGL 298
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
SS FD+EGV TQ R ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S +
Sbjct: 299 ASSPFDSEGVYTQDREIITDGVLATYLLTSYAARKMEMTPTGHAGGIHNWFVKS----TG 354
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
N ++MLK++ TG LVTE+MG G+N +TGDYS+GA G+W+ENG+IQY V E+TI+G L++
Sbjct: 355 QNFEQMLKELGTGFLVTEVMGQGVNTVTGDYSRGAAGFWVENGEIQYPVSEVTIAGNLKD 414
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
MF QIVA+G+DV TR+ +GSIL+E+M +AG+
Sbjct: 415 MFTQIVAVGNDVETRSQIQTGSILLESMKVAGE 447
>gi|119773622|ref|YP_926362.1| PmbA protein [Shewanella amazonensis SB2B]
gi|119766122|gb|ABL98692.1| microcin-processing peptidase 1. Unknown type peptidase. MEROPS
family U62 [Shewanella amazonensis SB2B]
Length = 453
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/437 (37%), Positives = 269/437 (61%), Gaps = 15/437 (3%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L+YA +G + + ++ G SV R +++ +E N D + + ++ +DG K G+SS
Sbjct: 27 LDYANTLGTGAAEVAISKQQGLSVSTRLKEVETVEFNKDGALGITVF-RDGCK---GSSS 82
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ + AA +IAR+T++D GL + + + D LY P L+ ++ +
Sbjct: 83 TSDLSPEAIRQAVKAADDIARYTSADPCNGLAEASLMAKTVADLDLYHPESLTPEELTEL 142
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE 205
A R E A + + I N++ + NSHGF++GY S++ S+S + I G+E
Sbjct: 143 AIRAEAAALDADPRIKNSDGASANAHTGIKVYGNSHGFLNGYCSSRY--SLSCVVI-GEE 199
Query: 206 ----MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFEL 261
MQRD YS + +L PE++G AA +T+SRL +KI+T PVLF +A L
Sbjct: 200 DDGNMQRDYDYSISRKYAELLSPELVGQKAAAKTLSRLGGRKIATGTMPVLFAHEVATGL 259
Query: 262 LNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKR 321
+ ISG+SLYRKS+FL+D L ++F + I E+PH+L S+ +D+EGV T R
Sbjct: 260 IGHLISAISGSSLYRKSSFLLDGLDTQVFPEWLNIREEPHLLAGLASAPYDSEGVATVDR 319
Query: 322 LVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLL 381
++K+G++ Y L++YSA+KLGM TG++GG ++ + N T + ++++M+ GL+
Sbjct: 320 DIIKDGLLATYLLTSYSARKLGMTNTGHAGGIYNWTL--NDTGV--DFDALVRQMDKGLI 375
Query: 382 VTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTR 441
VTE+MG G+N +TGDYS+GA G+++ENG+IQY VEEITI+G L++M++ I A+ D R
Sbjct: 376 VTEVMGQGVNMVTGDYSRGAAGFYVENGEIQYPVEEITIAGNLKDMYRSIQAVSQDRDLR 435
Query: 442 NSNTSGSILIENMIIAG 458
+S +G IL+++M +AG
Sbjct: 436 SSIRTGGILLDSMKVAG 452
>gi|384227536|ref|YP_005619281.1| PmbA protein [Buchnera aphidicola str. Ak (Acyrthosiphon kondoi)]
gi|345538476|gb|AEO08453.1| PmbA protein [Buchnera aphidicola str. Ak (Acyrthosiphon kondoi)]
Length = 446
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/413 (38%), Positives = 261/413 (63%), Gaps = 8/413 (1%)
Query: 46 GFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIA 105
G SV +R G I+ IE NND + + +Y K G S+ DF S+ + + A NI+
Sbjct: 41 GISVNIRNGIIENIEFNNDSVLFITVY----NKFSKGCVSSKDFSTNSIKNMLETAINIS 96
Query: 106 RFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNEN 165
++++SD F+GLPD L ++ ++ L+ PW +I+ A ++ E EAF+F+ IVN+E
Sbjct: 97 KYSSSDFFSGLPDIKLLCLHSVELDLFHPWEFNIEHAINLSILSEKEAFDFDKRIVNSEG 156
Query: 166 TGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPE 225
+ + + + NS G + Y +++ IA MQRD YS + L++PE
Sbjct: 157 SFFNSHVTINVFGNSLGMLETYKSTRYSTYNCMIAQDKNSMQRDFDYSISRKIDDLEKPE 216
Query: 226 IIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSL 285
I+G +A+R ISRL ++KI T K PV+F + ++ + ISG+++Y+KSTFL++ L
Sbjct: 217 ILGQSSARRAISRLGSRKIQTMKSPVIFSSEISHMFFSHLVHAISGDNVYQKSTFLINDL 276
Query: 286 GKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMK 345
KIF + I E+PH+ GS FDNEGV T+ + +++NGI+Q + L+TY+A+KL ++
Sbjct: 277 KSKIFPDWLNIEENPHLRQGLGSKPFDNEGVFTENKYIIQNGILQTWLLNTYNARKLRLE 336
Query: 346 TTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYW 405
+TGN GG ++ ++ + S+ + +E+L+K++ G+L+TELMG G++ I+G+YS+GA G+W
Sbjct: 337 STGNCGGIYNWLV----SNSNISFEELLQKVDQGILITELMGQGVDIISGNYSRGAVGFW 392
Query: 406 IENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
IE GKI Y + EITISG L+NM+ IV+I +D+ RN+ GS+L+ M I+G
Sbjct: 393 IEKGKISYPINEITISGNLRNMWNNIVSISTDIDKRNNIQCGSVLLSEMQISG 445
>gi|330446799|ref|ZP_08310450.1| modulator of DNA gyrase family protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328490990|dbj|GAA04947.1| modulator of DNA gyrase family protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 447
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 175/454 (38%), Positives = 276/454 (60%), Gaps = 12/454 (2%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
R + + E + L A K A + + N+ G SV R ++ +E N+D +
Sbjct: 4 REQVAQQRVELEAAVAKALEVAGK-QADAAEVAINKTTGISVSTRMCDVENVEFNSDGAL 62
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
+ +Y + K G++STSD + ++ T+ AA +IA +T+ D FAG + + N
Sbjct: 63 GITVYRGNRK----GSASTSDLSEAAIAQTVAAALDIANYTSEDPFAGPGPKELMARNIP 118
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ P D A IA E A ++ I ++ + + NSHG ++ Y
Sbjct: 119 DLDLFHPDEPEPDRAASIAIAAEEAALAYDPRIKQSDGASYDSHYGVRVYGNSHGMLASY 178
Query: 188 PFSKHIISISPIAIKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
S+H IS IA +GK EM+RD Y+++ L PE +G +AA+RT+ R+ A+K++
Sbjct: 179 ASSRHSISCCVIA-EGKNGEMERDYSYTTSRIASDLWTPERVGRHAAERTVGRVDAQKLT 237
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
TR+ PV+F A +A L ISG +LYRKS+FLVD LG++IF + I E PHIL
Sbjct: 238 TREAPVMFSADVATGLFGHLVMGISGANLYRKSSFLVDKLGEQIFPEWLNISERPHILRG 297
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
S+ FD+EG+ T R ++++G++Q Y L++Y+A+K+ M+ TG++GG H+ ++ S +
Sbjct: 298 MASTPFDSEGLATYDREIIQDGVLQTYLLTSYAARKMNMQPTGHAGGIHNWMVKS----T 353
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
++ ++MLKKM+ GLLVTELMG G+N +TGDYS+GA G+W+ENG+IQ+ V EITI+G L+
Sbjct: 354 GESFEQMLKKMDRGLLVTELMGQGVNIVTGDYSRGAAGFWVENGQIQFPVSEITIAGNLK 413
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+M + IVAIG+D TR+ +GS+L+++M IAG+
Sbjct: 414 DMMQNIVAIGNDTETRSQILTGSMLLDSMKIAGE 447
>gi|325578767|ref|ZP_08148814.1| peptide maturation protein PmbA [Haemophilus parainfluenzae ATCC
33392]
gi|325159591|gb|EGC71723.1| peptide maturation protein PmbA [Haemophilus parainfluenzae ATCC
33392]
Length = 461
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/448 (36%), Positives = 278/448 (62%), Gaps = 13/448 (2%)
Query: 15 KSEFQQLAQDMLNYA----KKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
KS+ Q L +D +++A +K GA+ + + + +G SV R +I+ +E ND + +
Sbjct: 22 KSQEQTL-RDAVSFAIETAQKAGAT-AEVGVTKVSGLSVSTRLQEIENVEFTNDGALGIS 79
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y+ K GN+STSD ++++ +T+ AA IA++T+ D+ GL D+ + D +
Sbjct: 80 VYLGQQK----GNASTSDLSEEAIKNTVEAALAIAKYTSPDDCTGLADKELMAFEAPDLE 135
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY + ++ A +A E A +++ IVN+ + + N+HG + Y S
Sbjct: 136 LYHGASVDVEQATKLALEAEKSALEYDAKIVNSNGASFNSHTGVRVYGNTHGMLQSYLSS 195
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
++ +S S I + +++ D Y+ + + L + +G AK+ I+RL +K+STR+ P
Sbjct: 196 RYSLSCSVIGGELDQLENDYEYTVSREFDALSSADWVGQNCAKKVIARLNPQKLSTREVP 255
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
V+F +A L++ ISG SLYRKS+FL+D LGK++ QI E PH+L S+
Sbjct: 256 VIFLNDVATGLISHLTGAISGGSLYRKSSFLLDHLGKQVLPDWFQISERPHLLRRLASTP 315
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGV+TQ ++++G++Q Y L++YS +K+GM++TG++GG H+ ++ N T L
Sbjct: 316 FDSEGVRTQNLEIIQDGVLQTYLLTSYSGRKMGMQSTGHAGGIHNWLVKPNLT---GGLT 372
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+L++M+TGLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+G+LQ+M K
Sbjct: 373 ALLRQMSTGLLVTDVMGQGVNIVTGDYSRGAAGFWVENGEIQYPVAEITIAGQLQDMLKN 432
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I+A+ D+ R++ +GSIL+ M I+G
Sbjct: 433 IIAVSDDIEHRSNIQTGSILLNKMKISG 460
>gi|320539729|ref|ZP_08039392.1| putative peptidase required for the maturation and secretion of an
antibiotic peptide [Serratia symbiotica str. Tucson]
gi|320030194|gb|EFW12210.1| putative peptidase required for the maturation and secretion of an
antibiotic peptide [Serratia symbiotica str. Tucson]
Length = 464
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 166/442 (37%), Positives = 261/442 (59%), Gaps = 9/442 (2%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+Q L A + + + + + G SV R G+++ +E N+D + + +Y Q K
Sbjct: 32 LEQAVSQALELAHAV-SDAAEVAVTKSTGISVSTRFGEVENVEFNSDGALGITVYHQQRK 90
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++S++D ++++ T+ AA +IAR+T+ D +AG +++ L + D L+ P
Sbjct: 91 ----GSASSTDLSREAIARTVQAALDIARYTSPDPYAGTAEKDLLAFDAPDLDLFHPTEQ 146
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ +A R E + + I N E + + NS G + Y S+H +S S
Sbjct: 147 DAERGIELAARAEQTSLAADKRITNTEGGSFNSHYGIKVFGNSQGMLQSYLSSRHSLSSS 206
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA M+RD Y+ L PE +G A+RT++RL +K+ST K PVLF A +
Sbjct: 207 VIAEHDGNMERDYAYTIGRAMDDLQSPEWVGQECARRTLARLVPRKLSTMKAPVLFAAEV 266
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L ISG+S+YRKSTFL+DSLG++I + I E PH+L S+ FD+EGV+
Sbjct: 267 ATGLFGHLVGAISGSSVYRKSTFLLDSLGQQILPDWLTIEEHPHLLKGLASTPFDSEGVR 326
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
TQ+R +VK+G++Q + L++Y+A+KLGM +TG++GG H+ I + MLK++
Sbjct: 327 TQRRDIVKDGVLQTWLLTSYAARKLGMYSTGHAGGIHNWRIAGQ----GGDFAAMLKQLG 382
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
TGL+VTELMG G++ +TGDYS+GA G+W+ENG+IQY V EITI+ L+ M + IV++GSD
Sbjct: 383 TGLVVTELMGQGVSGVTGDYSRGAAGFWVENGEIQYPVSEITIASNLKEMLRNIVSVGSD 442
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
R++ GS+L+ M IAG+
Sbjct: 443 NEIRSNIQCGSVLLPEMKIAGQ 464
>gi|86147586|ref|ZP_01065896.1| PmbA protein [Vibrio sp. MED222]
gi|85834625|gb|EAQ52773.1| PmbA protein [Vibrio sp. MED222]
Length = 447
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/452 (37%), Positives = 267/452 (59%), Gaps = 10/452 (2%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
+ + + E + L+ A + A + + + G SV R +++ +E N+D +
Sbjct: 4 KQQVAQQRVELEAAVAKALDMAS-VSADAAEVAITKSTGLSVSTRMCEVENVEFNSDGAL 62
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
+ +Y G+K G++STSD +K++ T+ AA +IA++T+ D FAG + +
Sbjct: 63 GITVY--RGQKK--GSASTSDLSEKAIAQTVAAALDIAQYTSEDPFAGPAAKEYMVKEIP 118
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ P + D A IA E +A ++ I ++ + + NSHG ++ Y
Sbjct: 119 DLDLFHPDEPNPDYAAEIAIAAEKQALAYSDKIKQSDGASYDSHYGVKVYGNSHGLLASY 178
Query: 188 PFSKHIISISPIAIKGK-EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
S+H S I EM+RD Y+ +L PE +G AA++TISRL AKK+ T
Sbjct: 179 ASSRHSTSCCVIGQGANGEMERDYSYTVARHRDELWTPERVGQEAAEKTISRLDAKKLPT 238
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
+ P++F +A L+ ISG +LYRKS+FL+D LG+KI I E PHIL
Sbjct: 239 GQYPIMFANDVATGLIGHLVMAISGGNLYRKSSFLLDHLGQKILPDWFNISERPHILRGL 298
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
SS FD+EGV TQ R ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S +
Sbjct: 299 ASSPFDSEGVFTQDREIITDGVLATYLLTSYAARKMDMTPTGHAGGIHNWFVKS----TG 354
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
N ++MLK++ TG LVTE+MG G+N +TGDYS+GA G+W+ENG+IQY V E+TI+G L++
Sbjct: 355 QNFEQMLKELGTGFLVTEVMGQGVNTVTGDYSRGAAGFWVENGEIQYPVSEVTIAGNLKD 414
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
MF QIVA+G+DV TR+ +GSIL+E+M +AG
Sbjct: 415 MFTQIVAVGNDVETRSQIQTGSILLESMKVAG 446
>gi|300312124|ref|YP_003776216.1| Zn-dependent protease TldE [Herbaspirillum seropedicae SmR1]
gi|300074909|gb|ADJ64308.1| Zn-dependent protease TLDE protein [Herbaspirillum seropedicae
SmR1]
Length = 457
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/454 (31%), Positives = 260/454 (57%), Gaps = 4/454 (0%)
Query: 5 IKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64
++N + + F+ +AQ L A++ GA+ ++++ E S V+ GK +
Sbjct: 7 LRNLNTMKDCQQHFETIAQQTLEVARQHGATAAAVQIEEVESLSASVQGGKPNERALRQS 66
Query: 65 KNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEM 124
+ + +++ G++ + S+SD ++ + + + A A D AGLP +
Sbjct: 67 AQLRLSLFL--GQR--EASVSSSDLSQQGVAALVARGMDSAAIAAEDQHAGLPGLSAYPS 122
Query: 125 NPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM 184
+ +D +L W L + DA + R E A +S + E + + ++ +LANS GF+
Sbjct: 123 DDVDLELDHAWQLGLRDAVALVARIERAALAVSSAVPQIEQAVLFSSRTRRVLANSEGFL 182
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
++H +S + +AI+ + ++W+ + DP +L PE +G A +R ++RL A+++
Sbjct: 183 RSSASTRHSLSCTAVAIRDGAKEIESWWDARRDPAQLPSPESLGACAGRRALARLGARQV 242
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
+T+ CPVLFE A LLN F + IS LY S+FL D+LG+++F++H+ I +DP + G
Sbjct: 243 ATQTCPVLFEPQAAASLLNEFVQAISARPLYMHSSFLRDALGQEVFAAHMNISDDPLLKG 302
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
GS S+D G + R ++ G +QGY+L Y A++LG+ + G ++++ S +
Sbjct: 303 GMGSRSYDGNGAALRPRTLIAGGRLQGYYLGAYGARRLGLPLAEHGAGPSNVMVSSTTSA 362
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+S +L+ M+++M TGL+++ L G G+N +TGD+S+ G+W+ENG+I Y V IT++ L
Sbjct: 363 ASGDLEAMIRRMGTGLVISGLNGQGVNLMTGDFSRACSGFWVENGQIAYPVAGITVASNL 422
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+ MF IVA+G+D LT+N T+GS LI+ M + G
Sbjct: 423 REMFAGIVAVGNDRLTQNGTTTGSWLIDKMRVGG 456
>gi|325273340|ref|ZP_08139609.1| pmbA protein [Pseudomonas sp. TJI-51]
gi|324101529|gb|EGB99106.1| pmbA protein [Pseudomonas sp. TJI-51]
Length = 353
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/355 (42%), Positives = 222/355 (62%), Gaps = 4/355 (1%)
Query: 104 IARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNN 163
IA+ T+ D+ +GL D + D LY W L + A +A CE AF+ + I+N
Sbjct: 2 IAKHTSEDDCSGLADAALMAREIPDLDLYHDWALEPEKAIEMALACEAAAFDADPRILNA 61
Query: 164 ENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQ 223
+ T + T Q + NSHGF+ Y ++H +S IA +MQRD WY N L
Sbjct: 62 DGTTLNTHQGCRVYGNSHGFIGAYASTRHSLSCVMIAEGDGQMQRDYWYDVNRQGNLLAD 121
Query: 224 PEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVD 283
P IG AA+R SRL A+ + T + PVLF A LA L F ISG +LYRKS+FL
Sbjct: 122 PRSIGVRAAQRAASRLGARPVPTCEVPVLFSAELAGGLFGSFLSAISGGNLYRKSSFLEG 181
Query: 284 SLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLG 343
S+G+++F S + + E PHI + S++FD +G+ T + V G + Y L TYS +KLG
Sbjct: 182 SIGQRLFPSWLTLDERPHIPRALASAAFDADGLATYAKPFVDKGELVSYLLGTYSGRKLG 241
Query: 344 MKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFG 403
+ +T N+GG H+L + + ++ ++++M GLLVTELMG G+N +TGDYS+GA G
Sbjct: 242 LPSTANAGGVHNLFV----SHGVEDQAALIRRMGRGLLVTELMGHGLNMVTGDYSRGAAG 297
Query: 404 YWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+W+ENG+IQ++V+E+TI+G +++MF+QIVAIGSD+ TR++ +GS+LIE M +AG
Sbjct: 298 FWVENGEIQHAVQEVTIAGNMKDMFQQIVAIGSDLETRSNIHTGSVLIERMTVAG 352
>gi|262273861|ref|ZP_06051674.1| PmbA protein [Grimontia hollisae CIP 101886]
gi|262222276|gb|EEY73588.1| PmbA protein [Grimontia hollisae CIP 101886]
Length = 446
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 174/458 (37%), Positives = 270/458 (58%), Gaps = 16/458 (3%)
Query: 2 EQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQ 61
+Q+ + R++ + S +LA KK A+ +I + G SV R +++ +E
Sbjct: 5 QQVAQQRAELEAAVSRALELA------GKKADAAEVAI--TKTTGISVSTRMCEVENVEF 56
Query: 62 NNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENT 121
N+D + + +Y + K G++STSD +K++ T+ AA +IA FT+ D F+G +
Sbjct: 57 NSDGALGITVYRGNRK----GSASTSDLSEKAIIQTVEAALDIANFTSEDPFSGPGPKEL 112
Query: 122 LEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSH 181
+ D L+ P D A A E A + I ++ + + NSH
Sbjct: 113 MAFEYPDLDLFHPDEPEPDHAAEKAIAAERAALAHDKRIKFSDGASYDSHYGVRVYGNSH 172
Query: 182 GFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKA 241
G + Y S+H IS S IA K M+RD Y+ + D +L PE +G AAKRT++R+
Sbjct: 173 GMLGSYASSRHSISCSVIAEDSKGMERDYSYTVSRDKDELWAPEKVGIEAAKRTLARMDP 232
Query: 242 KKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPH 301
+++ST + PV+F A +A LL ISG++LYRKS+FL+D LG +I +I E PH
Sbjct: 233 RRLSTGQFPVMFAADVATGLLGHLVMGISGSNLYRKSSFLLDKLGHQILPDWFEIYERPH 292
Query: 302 ILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISN 361
IL S+ FD+EG+ T+ ++K G +Q Y ++Y+A+KL M+ TG++GG H+ +
Sbjct: 293 ILKGMASAPFDSEGLITRDLDIIKAGELQSYLATSYAARKLNMQPTGHAGGIHNWFV--- 349
Query: 362 KTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITIS 421
+ + ++MLK++ TGLLVTELMG G+N +TGDYS+GA G+W+ENG+IQY V EITI+
Sbjct: 350 -KNTGQSFEQMLKELGTGLLVTELMGQGVNIVTGDYSRGAAGFWVENGEIQYPVSEITIA 408
Query: 422 GKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
G L +M++QIVA+G+D R+ +GSILIE+M I G+
Sbjct: 409 GNLSDMYRQIVAVGADTEFRSQIQTGSILIESMKIGGE 446
>gi|127511350|ref|YP_001092547.1| C69 family peptidase [Shewanella loihica PV-4]
gi|126636645|gb|ABO22288.1| peptidase U62, modulator of DNA gyrase [Shewanella loihica PV-4]
Length = 446
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 166/433 (38%), Positives = 265/433 (61%), Gaps = 8/433 (1%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YA K+G S + + ++ G SV R +++ +E N D + + ++ +DG K G+SS
Sbjct: 21 LEYAAKLGTSGAEVAISKQQGLSVSTRLKEVETVEFNKDGALGITLF-RDGCK---GSSS 76
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD +++ + AA +IARFT+ D F GL D + D +LY P + + + +
Sbjct: 77 TSDLSPEAIRRAVKAADDIARFTSEDPFNGLADAELMAKQIEDLELYYPHETTPAELEAL 136
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE 205
A R E A + ++ I N++ + NSHGF++GY S++ +S I +
Sbjct: 137 AARAETAALDADARIKNSDGASANAHTGAKVYGNSHGFLNGYVSSRYSLSCVVIGEQDGH 196
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
MQRD Y+ L PE +G AAK+T+SRL A+KI+T K P+LF +A L+
Sbjct: 197 MQRDYDYTVARRFDDLWTPEAVGQQAAKKTLSRLGARKIATTKLPILFAPDVATGLMGHL 256
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
ISG+SLYRKS+FL+D++ +IF I E PH+ G+ S+ +D+EGV T R ++
Sbjct: 257 VGAISGSSLYRKSSFLLDAIDTQIFPEWFTIAEQPHLKGALASAWYDSEGVATIDRNIID 316
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
+G++ Y L++YSA+KLG+ TG++GG ++ + + + E++K+M TGL+VTE+
Sbjct: 317 SGVLSTYLLTSYSARKLGLTNTGHAGGIYNWTL----SHTGQTFDELVKQMGTGLIVTEV 372
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
MG G+N +TGDYS+GA G+++ENG+I Y VEEITI+G L+ M++ +VA+G + R+S
Sbjct: 373 MGQGVNGVTGDYSRGAAGFYVENGEILYPVEEITIAGNLKEMYRNMVAVGKEQDLRSSIR 432
Query: 446 SGSILIENMIIAG 458
+G+IL++ M IAG
Sbjct: 433 TGAILLDEMKIAG 445
>gi|91794417|ref|YP_564068.1| peptidase U62, modulator of DNA gyrase [Shewanella denitrificans
OS217]
gi|91716419|gb|ABE56345.1| microcin-processing peptidase 1. Unknown type peptidase. MEROPS
family U62 [Shewanella denitrificans OS217]
Length = 447
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 176/437 (40%), Positives = 265/437 (60%), Gaps = 15/437 (3%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L +AKK+G+S + + ++ G SV R +++ +E N D + + +Y + G K G+SS
Sbjct: 21 LAHAKKLGSSAAEVAISKQQGLSVSTRTQEVETVEFNKDGALGITVY-RGGCK---GSSS 76
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD ++ + AA +IAR+T+ D F+GL D + N D +LY P + ++ +
Sbjct: 77 TSDLSTDAIALAVKAADDIARYTSEDPFSGLADSALMAKNIRDLQLYYPQDIGAEELADL 136
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE 205
A R E + ++ I ++ S + ANSHGF+ GY S++ S+S + I G+E
Sbjct: 137 AIRAEKAGVDADTRIKYSDGATANAHTSAKVYANSHGFLQGYCSSRY--SLSSVVI-GEE 193
Query: 206 ----MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFEL 261
MQRD Y+ + L PE +G AA++T+SRL A+KI+T K PVLF +A L
Sbjct: 194 SDGNMQRDYDYTVSRKFADLLSPEEVGAKAAEKTLSRLDARKIATAKLPVLFAPEIATGL 253
Query: 262 LNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKR 321
+ ISG SLYRKS+FL+DSL IF I E PHIL S+++D+EGV TQ R
Sbjct: 254 IGHLIGAISGGSLYRKSSFLLDSLHTHIFPDWFSIEEQPHILSGLASANYDSEGVATQDR 313
Query: 322 LVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLL 381
++ G ++ Y L++YSA+KLGM TG++GG ++ + + S+ +++K MNTGL+
Sbjct: 314 RIIDRGQLETYLLTSYSARKLGMTNTGHAGGIYNWTL----SHSNQTFADLIKAMNTGLI 369
Query: 382 VTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTR 441
VTE+MG G+N +TGDYS+GA G+++ENG IQY VEEITI+G L++MF I + D R
Sbjct: 370 VTEVMGQGVNGVTGDYSRGAAGFYVENGVIQYPVEEITIAGNLKDMFIGIQGVAMDRDLR 429
Query: 442 NSNTSGSILIENMIIAG 458
+S +G IL+ M IAG
Sbjct: 430 SSIRTGGILLSEMKIAG 446
>gi|170734616|ref|YP_001773730.1| peptidase U62 modulator of DNA gyrase [Burkholderia cenocepacia
MC0-3]
gi|169820654|gb|ACA95235.1| peptidase U62 modulator of DNA gyrase [Burkholderia cenocepacia
MC0-3]
Length = 452
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 163/444 (36%), Positives = 247/444 (55%), Gaps = 4/444 (0%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
KS+ + A+ L+ A++ GA +E + + VR +++++Y +
Sbjct: 12 KSDLEAAAECALDLARRAGADGVRVEVDHVESRTATVRNRMPTERSLRLSSAVSLVVY-R 70
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
+G++ G++++SD L + AA +IA T D AGL + L + +D LY P
Sbjct: 71 NGRR---GSTTSSDLSPDGLAGAVAAAIDIASVTDVDAAAGLAQADLLARDFIDLDLYHP 127
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
LS+DD A R E AF+ + +IV + V T LLA S GF P+S H +
Sbjct: 128 LDLSLDDMLDDARRAEEAAFSTSPVIVTTNGSSVGTSAGLSLLATSEGFGHSVPWSAHFV 187
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S P+A E Q W LD P IG AA R ++ L ++ T++CPVLFE
Sbjct: 188 SCMPVAAGIGEKQMGFWSDGARAYADLDAPARIGTQAATRALALLGGTQVETQRCPVLFE 247
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
A LL F SG++LYR ++L LG +F+ HIQ+ EDP + S FD++
Sbjct: 248 PMAAMSLLGEFVNAASGDALYRTGSYLTRRLGTPVFADHIQLYEDPFVSRGMASRCFDSD 307
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV +R VV G+++GYFL Y+A++LGM TGN G H+L + S KT +SD + ML+
Sbjct: 308 GVAVSRRSVVDAGVLRGYFLGLYAARRLGMAPTGNGWGPHNLEVRSAKTANSDGIDAMLE 367
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+++ GL VTE+ G G+N +TGD+S+ A G+W+ENG+I++ V ITI+ L MF ++A+
Sbjct: 368 RLDRGLFVTEMAGGGVNRLTGDFSRAAKGFWVENGQIRFPVTGITIASNLNAMFSGLLAV 427
Query: 435 GSDVLTRNSNTSGSILIENMIIAG 458
G+D +TR S +GS LI+ M I G
Sbjct: 428 GADTVTRGSFRTGSWLIDEMRIGG 451
>gi|33519762|ref|NP_878594.1| PmbA protein [Candidatus Blochmannia floridanus]
gi|33504107|emb|CAD83369.1| PmbA protein; putative modulatory Zn-dependent protease [Candidatus
Blochmannia floridanus]
Length = 447
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 174/460 (37%), Positives = 267/460 (58%), Gaps = 19/460 (4%)
Query: 1 MEQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIE 60
+ Q I RS F+ +++ L +K + S + + G +V +I+ E
Sbjct: 4 INQDIDKRSAFL------EKIVYQALELTRKY-SQESEVSIIKTTGITVNTLGERIENAE 56
Query: 61 QNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDEN 120
N+++ + VI+++ K + + N + +++ DTINAA NIA +T+ D +G+ D+
Sbjct: 57 FNDNEVLKVIVFLNKKKGVAFSN----NLNMQAVVDTINAAVNIASYTSKDKCSGISDQE 112
Query: 121 TLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANS 180
L +P+ L P L I+ +A + E A ++ I+ E + + + + NS
Sbjct: 113 LLSFDPIYLDLLHPIKLDINFGIKLASQAEKIALQYDKRIICTEGSRFNSYVTTKVFGNS 172
Query: 181 HGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLK 240
HG +S Y S+H + S IA + MQ++ Y+ N KL+ PE +G +A+R I+RL
Sbjct: 173 HGMLSSYSSSQHALYCSVIAERDGIMQQNYAYTLNRVFNKLNTPEWVGQESARRAIARLG 232
Query: 241 AKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDP 300
+KKI T K VLF + +A L + I GN++YRKSTFL+ LGKKIF S I I E P
Sbjct: 233 SKKIKTMKSKVLFASEIATSLFQHLSSAIQGNNVYRKSTFLLHQLGKKIFPSWISIKELP 292
Query: 301 HILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIIS 360
H+ GS+ FDNEGVKT +L++KNG++ + L TYSA+K+ K TGNSGG ++ +
Sbjct: 293 HVSRELGSAPFDNEGVKTSNKLIIKNGVLNSWLLDTYSARKINFKNTGNSGGIYNWYV-- 350
Query: 361 NKTKSSDNLK--EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEI 418
S N+ E+++ M GL+VT+LMG G+N +TG YS+G G+W+ENG+IQY V E+
Sbjct: 351 ----SCHNISFYELIEDMQRGLIVTDLMGQGVNIVTGHYSRGICGFWVENGEIQYPVNEV 406
Query: 419 TISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
ISG L MF IVAI +D+ TR + GS+LI++M IAG
Sbjct: 407 AISGNLMEMFSNIVAISNDIETRTNIRCGSVLIDSMQIAG 446
>gi|118602936|ref|YP_904151.1| peptidase U62, modulator of DNA gyrase [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
gi|118567875|gb|ABL02680.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 439
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 159/409 (38%), Positives = 252/409 (61%), Gaps = 8/409 (1%)
Query: 51 VRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTAS 110
VR GK++ +E + DK+ ++ +Y+ + K G++S+ DF K+ + TI +A IA++T +
Sbjct: 38 VRLGKVETLEYHLDKSFDINVYMGNKK----GHASSVDFSKRCISKTIESACLIAKYTQN 93
Query: 111 DNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTT 170
D F GL + + N D LY PW L D+ +A RCE +A + I N++ +++
Sbjct: 94 DEFNGLAPKELMAFNAPDLDLYYPWDLDSSDSIELAMRCEAKALD-QKYIDNSDGAELSS 152
Query: 171 QQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFY 230
Q L NSHG M+ +KH + + IA + K+MQ Y+ D L+ PE++G
Sbjct: 153 YQGKGLYVNSHGMMAAQQSAKHSLHCAIIAKQDKDMQTAYEYTVALDNNDLESPEVVGQK 212
Query: 231 AAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIF 290
AAK I++L + ++++KCP++F L+ L + +SG Y+KSTFL+ S+ +KI
Sbjct: 213 AAKLAINKLGTRSLTSKKCPIIFTPRLSCGLFSQLMGALSGARQYKKSTFLLGSIEQKIM 272
Query: 291 SSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNS 350
S I ++E+P + + G+ +FD +GV +++ VK+G +Q Y + YSA +LG+KTT N+
Sbjct: 273 PSGISLLENPLVKKTIGAKAFDQDGVLKRRQYFVKDGQVQSYIMGQYSANQLGLKTTANA 332
Query: 351 GGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGK 410
GG ++++I L EM+K M+ GLLVTELMG G+NYITGDYS+GA G+W++NGK
Sbjct: 333 GGVNNVMI---GHGFEGGLDEMIKDMHQGLLVTELMGQGVNYITGDYSRGALGFWVDNGK 389
Query: 411 IQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IQY V ITI+G L+ M + IGSD+ R++ GS+L+ M IAG+
Sbjct: 390 IQYPVSGITIAGNLKEMLLGVEHIGSDIDHRSNIKVGSVLVNQMTIAGE 438
>gi|212554896|gb|ACJ27350.1| Peptidase U62, modulator of DNA gyrase [Shewanella piezotolerans
WP3]
Length = 446
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/433 (37%), Positives = 257/433 (59%), Gaps = 8/433 (1%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
L YAK +G S + + ++ G SV R +++ +E N D + + ++ +DG K G+SS
Sbjct: 21 LEYAKTLGTSGAEVAISKQQGLSVSTRMKEVETVEFNKDGALGITLF-RDGCK---GSSS 76
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD ++ + AA +IARFT++D F GL +++ + + D LY P +S ++ I
Sbjct: 77 TSDLSPAAIKQAVKAADDIARFTSADPFNGLAEKSLMATDLPDLDLYHPETVSPEELTRI 136
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE 205
A E + + + ++ S + NSHGF+ GY S++ +S I
Sbjct: 137 AILAEEACLDVDDRVQISDGASANAHSSVKVYGNSHGFLHGYCSSRYSLSCVAIGENDNG 196
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
MQRD Y+ + PE+IG AA +T SRL +KI T + PVLF +A L+
Sbjct: 197 MQRDYDYTVARKYADMLAPELIGRKAATKTASRLGGRKIPTTELPVLFSPEIATGLMGHL 256
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
ISG S+YRKS+FL+D++ ++F I E P + G+ S+++D+EGV TQ+R ++
Sbjct: 257 VGAISGGSIYRKSSFLLDAVDTQVFPDWFSIEEQPLLKGALASAAYDSEGVGTQERKIID 316
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
NG + Y L++YSA+KLG+ TG++GG ++ + S + +++++M TGL+VTE+
Sbjct: 317 NGRLATYLLTSYSARKLGLTNTGHAGGIYNWTLSS----TGQTFDQLVQEMGTGLIVTEV 372
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
MG G+N +TGDYS+GA G+++ENG I Y VEEITI+G L++M+ IVA+ D R+S
Sbjct: 373 MGQGVNTVTGDYSRGAAGFYVENGVILYPVEEITIAGNLKDMYSNIVAVAKDRDLRSSIR 432
Query: 446 SGSILIENMIIAG 458
+G IL++ M IAG
Sbjct: 433 TGGILMDKMKIAG 445
>gi|323494197|ref|ZP_08099311.1| peptidase PmbA [Vibrio brasiliensis LMG 20546]
gi|323311538|gb|EGA64688.1| peptidase PmbA [Vibrio brasiliensis LMG 20546]
Length = 447
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 173/455 (38%), Positives = 271/455 (59%), Gaps = 14/455 (3%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
R + + E + L+ A + + + + ++ G SV R +++ +E N+D +
Sbjct: 4 RQQVAQQRVELEAAVAKALDMAAE-KSDAAEVAISKTTGLSVSTRMCEVENVEFNSDGAL 62
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAG-LPDENTLEMNP 126
+ +Y K G++STSD +K++ T+ AA +IA++T+ D FAG P E ++ P
Sbjct: 63 GITVYRNQRK----GSASTSDLSEKAIQQTVLAALDIAQYTSEDPFAGPAPKELMVKEIP 118
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D L+ P D A IA E +A +++ I ++ + + NSHG ++
Sbjct: 119 -DLDLFHPDTPDPDMAAQIAIAAEQQALSYSDKIKQSDGASYDSHYGLKVYGNSHGLLAS 177
Query: 187 YPFSKHIISISPIAIKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
Y S+H S I +G EM+RD Y+ L PEI+G AA++T+SRL A+K+
Sbjct: 178 YASSRHSTSCCVIG-QGSNGEMERDYSYTVARHKDDLWTPEIVGQKAAEKTVSRLDAQKL 236
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
T + PV+F A +A LL ISG +LYRKS+FL+D LGK+I + E PH+L
Sbjct: 237 KTGQYPVMFAADVATGLLGHLVMAISGGNLYRKSSFLLDHLGKQILPEWFSVSERPHVLR 296
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTK 364
S+ FD+EGV TQ R ++ +G + Y L++Y+A+K+ M TG++GG H+ + S
Sbjct: 297 GLASTPFDSEGVFTQDREIITDGTLATYLLTSYAARKMNMTPTGHAGGIHNWFVKS---- 352
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+ N ++MLK + TGLLVTE+MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+ L
Sbjct: 353 TGQNFEQMLKDLGTGLLVTEVMGQGVNVVTGDYSRGAAGFWVENGEIQYPVSEITIASNL 412
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++M+ QIVA+G+DV TR+ +GSIL+E+M +AG+
Sbjct: 413 KDMYNQIVAVGNDVETRSQIQTGSILLESMKVAGE 447
>gi|149190581|ref|ZP_01868850.1| peptidase PmbA [Vibrio shilonii AK1]
gi|148835579|gb|EDL52547.1| peptidase PmbA [Vibrio shilonii AK1]
Length = 447
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/454 (37%), Positives = 263/454 (57%), Gaps = 12/454 (2%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
R + ++E + L+ A + + + + + G SV R +++ +E N+D +
Sbjct: 4 REQVAQQQAELEAAVAKALDMAS-VNSDAAEVAITKSTGLSVSTRMCEVENVEFNSDGAL 62
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
+ +Y + G++STSD +K++ T+ AA +IA++T+ D FAG + L N
Sbjct: 63 GITVY----RGQRKGSASTSDLSEKAIAQTVAAALDIAQYTSEDPFAGPAPKELLVTNIP 118
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ P + D A A E A ++ I ++ + + NSHG ++GY
Sbjct: 119 DLDLFHPDEPNPDVAAQKAIAAEKAALAYSDKIKQSDGASYDSHYGVKVYGNSHGLLAGY 178
Query: 188 PFSKHIISISPIAIKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
S+H IS S I +G+ +M+RD Y+ L PE +G AA +T+ RL +K+
Sbjct: 179 ASSRHSISCSVIG-QGQNGDMERDYSYTLARHRDDLWTPESVGEKAAIKTVERLDPRKVK 237
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
T + PVLF +A L+ ISG +LYRKS+FL+D LG++I I E PH+L
Sbjct: 238 TGQYPVLFANDVATGLMGHLVMGISGGNLYRKSSFLLDKLGEQILPDWFAIEEKPHLLKG 297
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
SS FDNEGV TQ ++ +G + Y L++Y+A+KL M TG++GG H+ + S +
Sbjct: 298 LASSPFDNEGVATQDLDIITDGKLATYLLTSYAARKLNMTPTGHAGGIHNWFVKS----T 353
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
+ MLK + TGLLVTE+MG G+N +TGDYS+GA G+W+ENG+IQY V EIT++G L
Sbjct: 354 GQDFDAMLKTLGTGLLVTEVMGQGVNIVTGDYSRGAAGFWVENGEIQYPVSEITVAGNLA 413
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
MFKQIVA+GSDV TR+ +GSIL+E+M +AG+
Sbjct: 414 QMFKQIVAVGSDVETRSQIQTGSILLESMKVAGE 447
>gi|327200702|pdb|3QTD|A Chain A, Crystal Structure Of Putative Modulator Of Gyrase (Pmba)
From Pseudomonas Aeruginosa Pao1
gi|327200703|pdb|3QTD|B Chain B, Crystal Structure Of Putative Modulator Of Gyrase (Pmba)
From Pseudomonas Aeruginosa Pao1
gi|327200704|pdb|3QTD|C Chain C, Crystal Structure Of Putative Modulator Of Gyrase (Pmba)
From Pseudomonas Aeruginosa Pao1
gi|327200705|pdb|3QTD|D Chain D, Crystal Structure Of Putative Modulator Of Gyrase (Pmba)
From Pseudomonas Aeruginosa Pao1
Length = 449
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 167/443 (37%), Positives = 263/443 (59%), Gaps = 8/443 (1%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
+ ++ + ++ A++ GAS + + G S VR+G+++ +E N D+ + +Y
Sbjct: 15 DLREQVEQIIAEARRQGASACEVAVSLEQGLSTSVRQGEVETVEFNRDQGFGITLYAGQR 74
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G++STS + ++ +T+ AA IAR T+ D AGL D + LY PW
Sbjct: 75 K----GSASTSATGEAAIRETVAAALAIARHTSEDECAGLADAALXARELPELDLYHPWS 130
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
LS + A A CE AF + + + T + T Q + NSHGF+ GY ++H +S
Sbjct: 131 LSPEQAVERALACEAAAFAADKRVTKADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSC 190
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
IA + QRD WY N + L E IG AA+R SRL A+ + T + PVLF
Sbjct: 191 VXIAEGEGQXQRDYWYDVNRRGEALASAESIGRRAAERAASRLGARPVQTAEVPVLFAPE 250
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
+A L F ISG SLYRKS+FL +LG+++F + I E PH++G+ GS+SFD++G+
Sbjct: 251 IAVGLFGHFLGAISGGSLYRKSSFLEGALGQRLFPEWLSIDERPHLVGALGSASFDSDGL 310
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T + V+NG + Y L TYS +KLG+ +T N+GG H+L + + ++ ++++
Sbjct: 311 ATYAKPFVENGELVSYVLGTYSGRKLGLPSTANAGGVHNLFV----SHGDEDQAALIRRX 366
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTEL G G+N +TGDYS+GA GYW+ENG+IQ+ V+E+TI+ L+++F++IVA+G
Sbjct: 367 ERGLLVTELXGQGVNLVTGDYSRGAAGYWVENGEIQFPVQEVTIAANLRDLFRRIVAVGK 426
Query: 437 DVLTRNSNTSGSILIENMIIAGK 459
D+ R + +GS+L+E+ +AG+
Sbjct: 427 DIERRGNLHTGSVLVESXXVAGR 449
>gi|407070174|ref|ZP_11101012.1| peptidase PmbA [Vibrio cyclitrophicus ZF14]
Length = 447
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 169/454 (37%), Positives = 270/454 (59%), Gaps = 12/454 (2%)
Query: 8 RSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNM 67
+ + + E + L+ A + A + + + G SV R +++ +E N+D +
Sbjct: 4 KQQVAQQRVELEAAVAKALDMAS-VSADAAEVAITKSTGLSVSTRMCEVENVEFNSDGAL 62
Query: 68 NVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
+ +Y G+K G++STSD +K++ T+ AA +IA++T+ D FAG + +
Sbjct: 63 GITVY--RGQKK--GSASTSDLSEKAIAQTVAAALDIAQYTSEDPFAGPAAKEYMVKEIP 118
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ P + D A IA E +A ++ I ++ + + NSHG ++ Y
Sbjct: 119 DLDLFHPDEPNPDYAAEIAIAAEKQALAYSDKIKQSDGASYDSHYGVKVYGNSHGLLASY 178
Query: 188 PFSKHIISISPIAIKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIS 245
S+H S I +G EM+RD Y+ +L PE +G A+++TISRL AKK+
Sbjct: 179 ASSRHSTSCCVIG-QGTNGEMERDYSYTVARHRDELWTPERVGQEASEKTISRLDAKKLP 237
Query: 246 TRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGS 305
T + P++F +A L+ ISG +LYRKS+FL+D LG+KI I E PH+L
Sbjct: 238 TGQYPIMFANDVATGLIGHLVMAISGGNLYRKSSFLLDHLGQKILPDWFNISERPHLLRG 297
Query: 306 FGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKS 365
SS FD+EGV TQ R ++ +G++ Y L++Y+A+K+ M TG++GG H+ + S +
Sbjct: 298 LASSPFDSEGVYTQDREIITDGVLATYLLTSYAARKMDMTPTGHAGGIHNWFVKS----T 353
Query: 366 SDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
+ ++MLK++ TG LVTE+MG G+N +TGDYS+GA G+W+ENG+IQY V E+TI+G L+
Sbjct: 354 GQSFEQMLKELGTGFLVTEVMGQGVNTVTGDYSRGAAGFWVENGEIQYPVSEVTIAGNLK 413
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+MF QIVA+G+DV TR+ +GSIL+E+M +AG+
Sbjct: 414 DMFTQIVAVGNDVETRSQIQTGSILLESMKVAGE 447
>gi|319760435|ref|YP_004124373.1| putative modulator of DNA gyrase [Candidatus Blochmannia vafer str.
BVAF]
gi|318039149|gb|ADV33699.1| putative modulator of DNA gyrase [Candidatus Blochmannia vafer str.
BVAF]
Length = 446
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 162/427 (37%), Positives = 259/427 (60%), Gaps = 12/427 (2%)
Query: 34 ASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKS 93
+ S + + G +V R G ++ IE +N++ + + ++ Q K + + N + ++S
Sbjct: 29 SQESEVSIIKTTGINVSTRYGNVENIEFDNNEILKITVFFQHKKGIVFLN----NLSEQS 84
Query: 94 LYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEA 153
+ D ++ A +IAR+ + D ++G+ D+ L NP+ L P L I + +A R EN A
Sbjct: 85 IIDAVHYAVDIARYASIDLYSGIADKELLAFNPVYLDLCHPIELDIKSSIQLASRAENTA 144
Query: 154 FNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYS 213
N++ I+ E ++ + + NSHG +S Y S++ +S + IA M++D Y+
Sbjct: 145 LNYDRRIICTEGGRFSSHITTVIFGNSHGMLSSYSSSQYFLSCNVIAESNGVMEQDYSYT 204
Query: 214 SNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNS 273
+ KKL PE +G A+R + L ++KI+T + PVLF + A LL A I G++
Sbjct: 205 LSRVFKKLRSPEWVGKECARRVLMHLNSRKINTIESPVLFTSETAVSLLQHLANAIHGDN 264
Query: 274 LYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYF 333
+Y++STFL++ LGKKIF S I E PH+ GS+ FD+EGV+T + +VKNGI+ +
Sbjct: 265 IYKQSTFLLNDLGKKIFPSWFCIKEIPHVSQELGSAPFDDEGVQTLNKSIVKNGILNSWL 324
Query: 334 LSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK--EMLKKMNTGLLVTELMGDGIN 391
L+TYSA K+G+K+TGN+GG H+ + S N+ E++K MN GL++T LMG G+N
Sbjct: 325 LNTYSANKIGLKSTGNAGGIHNWYV------SCQNISFMELIKIMNRGLIITNLMGQGVN 378
Query: 392 YITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILI 451
+TGDYS+GA G+W+ +G+IQY V EIT+SG L+ MF + +I +D+ TR++ GSILI
Sbjct: 379 IVTGDYSRGASGFWVNHGEIQYPVHEITVSGNLRQMFLNVNSISNDIETRSNIHCGSILI 438
Query: 452 ENMIIAG 458
M IAG
Sbjct: 439 NAMQIAG 445
>gi|225874187|ref|YP_002755646.1| TldD/PmbA family protein [Acidobacterium capsulatum ATCC 51196]
gi|225794314|gb|ACO34404.1| TldD/PmbA family protein [Acidobacterium capsulatum ATCC 51196]
Length = 460
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 155/457 (33%), Positives = 267/457 (58%), Gaps = 18/457 (3%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
S Q+LA +M+ A + GAS + + EG+ FS VR G+++ ++++ + + + + +
Sbjct: 8 STLQELATEMVARALRAGASDAEVSVREGDEFSTTVRMGEVETLKESGSRGIGLRVLVAG 67
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
+SS+SD L + A +A+ T+ D FAGLP+ + D +LY
Sbjct: 68 ENGYRVASSSSSDLTPDGLEHLVRGAMALAQVTSEDPFAGLPEPGSFGQLDGDLELYFDD 127
Query: 136 FLSIDDAKLIAY--RCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHI 193
S+ + IAY R E + ++ +VN++ ANS GF Y S
Sbjct: 128 VYSLPTEERIAYAKRAEAASLAGDARLVNSDGASFDAATGRMAFANSRGFAGEYRSSYCS 187
Query: 194 ISISPIAIKGK--EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPV 251
+ SPIA +GK EMQRD WYS+ KLD PE +G AA+RT+ L A+++ T++ PV
Sbjct: 188 VVASPIA-QGKDGEMQRDYWYSNARSLAKLDSPEEVGRIAAERTLRMLDARRVKTQQAPV 246
Query: 252 LFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSF 311
+F LA L+ +SG++++R ++FL LG+ I + +++D I G FG+ F
Sbjct: 247 VFAPELAGGLVGAIFDAVSGDAVWRGASFLAGKLGETIAVPGLTVVDDGTIPGGFGTRPF 306
Query: 312 DNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSG---------GAHHLIIISNK 362
D EG+ T++ ++V+NG+++ Y L +Y+A+KL M++TGN+G +H+L + +
Sbjct: 307 DGEGLPTRRNVLVENGVLKSYVLHSYTARKLKMQSTGNAGRGLAGNPYTASHNLFMEAGT 366
Query: 363 TKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISG 422
T +E+L+++ TG VT LMG G+N +TGDYS+GA G WIENG++ + V+E+T++G
Sbjct: 367 TTP----EEILRQVGTGFYVTRLMGRGVNMVTGDYSRGAAGLWIENGELAFPVQEVTVAG 422
Query: 423 KLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
L++M + I A+G+D++ R+S ++ ++ ++ M I+G+
Sbjct: 423 NLKDMLQNISAMGNDLVFRSSTSAPTLRVDGMTISGR 459
>gi|260775609|ref|ZP_05884506.1| PmbA protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260608790|gb|EEX34955.1| PmbA protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 447
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 166/426 (38%), Positives = 259/426 (60%), Gaps = 13/426 (3%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + + G SV R +++ +E N+D + + +Y + G++STSD +K++
Sbjct: 32 AEVAITKTTGLSVSTRMCEVENVEFNSDGALGITVY----RGQRKGSASTSDLSEKAIQQ 87
Query: 97 TINAAYNIARFTASDNFAG-LPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFN 155
T+ AA +IA +T+ D AG P E ++ P D L+ P D A IA E +A +
Sbjct: 88 TVMAALDIANYTSEDPCAGPAPKELMVKEIP-DLDLFHPDTPDPDHAAEIAIAAEQQALS 146
Query: 156 FNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE--MQRDNWYS 213
F+ I ++ + + NSHG ++ Y S+H S I +G+ M+RD Y+
Sbjct: 147 FSDKIKQSDGASYDSHYGLKVYGNSHGLLASYASSRHSTSCCVIG-QGESGVMERDYSYT 205
Query: 214 SNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNS 273
L PE +G AA++TISRL A+K+ T K PV+F A +A LL ISG +
Sbjct: 206 VARHKDDLWTPESVGLKAAEKTISRLDAQKLKTGKYPVMFAADVATGLLGHLVMAISGGN 265
Query: 274 LYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYF 333
LYRKS+FL+D LG+++ + E PH+L SS FD+EGV+TQ R ++ +G++ Y
Sbjct: 266 LYRKSSFLLDHLGQQVLPDWFNVSEKPHVLRGLASSPFDSEGVRTQDREIITDGVLATYL 325
Query: 334 LSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYI 393
L++Y+A+K+ M TG++GG H+ + S + + ++MLK++ TG LVTE+MG G+N +
Sbjct: 326 LTSYAARKMDMAPTGHAGGIHNWFVQS----TGQDFEQMLKELGTGFLVTEVMGQGVNIV 381
Query: 394 TGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIEN 453
TGDYS+GA G+W+ENG+IQY V E+TI+ L++MF QIVA+G+DV TR+ +GSILIE+
Sbjct: 382 TGDYSRGAAGFWVENGQIQYPVSEVTIASNLRDMFNQIVAVGNDVETRSQIQTGSILIES 441
Query: 454 MIIAGK 459
M +AG+
Sbjct: 442 MKVAGE 447
>gi|27904588|ref|NP_777714.1| PmbA protein [Buchnera aphidicola str. Bp (Baizongia pistaciae)]
gi|48474426|sp|Q89AY6.1|PMBA_BUCBP RecName: Full=Protein PmbA homolog
gi|27903985|gb|AAO26819.1| PmbA protein [Buchnera aphidicola str. Bp (Baizongia pistaciae)]
Length = 448
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 167/440 (37%), Positives = 264/440 (60%), Gaps = 11/440 (2%)
Query: 23 QDMLNYAKKIGASHS---SIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKM 79
+ ++ Y + A+HS + + G V +RK ++ IE N + + + +Y + K M
Sbjct: 15 KKIVEYILNLAANHSVFSEVVIEKNCGVDVLIRKNSVNSIEFNKNNILTITVYKNNRKGM 74
Query: 80 FYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL-DFKLYTPWFLS 138
S++D KS+++ ++ I +++ D F+GLPD L +N + D LY W +
Sbjct: 75 V----SSTDLSFKSIHNVFSSVMGIVFYSSPDEFSGLPDRKLLAINKVKDLDLYHDWDWN 130
Query: 139 IDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISP 198
I+ A IA E EAF + I+N+E + + NS G + Y + + S
Sbjct: 131 INHAIEIAKLSEREAFKEDKRIINSEGSCFNSLVRTRAFGNSLGMIECYSTTLYSTSCCV 190
Query: 199 IAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLA 258
IA +MQRD +S + D L+ PE +G +AK+ +SRL +KK+ T K +F + +A
Sbjct: 191 IAGDNGDMQRDFSFSVSRDMNDLNLPEKVGQDSAKKALSRLNSKKLLTMKTSAIFSSEIA 250
Query: 259 FELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKT 318
FE FA+ I+GN++Y+KSTFL+ SL ++F + + I E PHI S FD EGV T
Sbjct: 251 FEFFINFAKAINGNNVYQKSTFLLHSLNTQVFPNWLTIEERPHIKKGLSSKCFDAEGVMT 310
Query: 319 QKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNT 378
+ + +V GI++ + L TYSA+K+ + +TGNSGG H+ +I+ N S++ L+ +LK MNT
Sbjct: 311 KTKKIVNKGILKTWLLDTYSARKINLVSTGNSGGIHNWLILGN---SNEGLQSLLKSMNT 367
Query: 379 GLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDV 438
GLL+TEL+G G++ TG+YS+GA G+W++ G I+Y V EITISG L+NMFK IV+IG+D+
Sbjct: 368 GLLITELLGQGVSITTGNYSRGAVGFWVDQGVIKYPVNEITISGNLKNMFKDIVSIGNDI 427
Query: 439 LTRNSNTSGSILIENMIIAG 458
R+S SGSIL+ + ++G
Sbjct: 428 DKRHSIQSGSILLSQIQVSG 447
>gi|343518289|ref|ZP_08755282.1| protein PmbA [Haemophilus pittmaniae HK 85]
gi|343393780|gb|EGV06332.1| protein PmbA [Haemophilus pittmaniae HK 85]
Length = 451
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/433 (36%), Positives = 267/433 (61%), Gaps = 8/433 (1%)
Query: 26 LNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSS 85
++ A K GA+ + + + +G SV R +I+ +E ND + + +Y+ + K GN+S
Sbjct: 26 IDLAVKAGAT-AEVGVTKVSGLSVSSRLQEIENVEFTNDGALGISVYLGNQK----GNAS 80
Query: 86 TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLI 145
TSD + ++ + +A IA++T+ D+ AGL + + D +LY P +S+++A +
Sbjct: 81 TSDLSEGAIQHAVESALAIAKYTSPDDCAGLAPRELMAFDAPDLQLYHPAKVSVEEATRL 140
Query: 146 AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKE 205
E A +F+ IVN+ + + NS+G + Y S++ +S S I +
Sbjct: 141 TLAAEKAALDFDEKIVNSNGADFNSHTGVRVYGNSYGMLQSYLSSRYSLSCSMIGGINNQ 200
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
++ D Y+ + + +L P +G + ++ ++RL +K++TR+ PV+F +A +++ F
Sbjct: 201 LENDYEYTISRNFAELADPVWVGRHCGEKVVARLNPQKLTTREVPVVFLNDVATGIISHF 260
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
A ISG SLYR+S+FL+D LGK++ I E PH+L S+ FD+EGV+T +V+
Sbjct: 261 AAAISGGSLYRQSSFLLDHLGKQVLPDWFNISERPHLLSRLASTPFDSEGVRTSDMEIVE 320
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
NGI+ Y L++YSA+KL M++ G++GG H+ ++ +N T D L L++M TGLLVT++
Sbjct: 321 NGILAHYLLTSYSARKLNMQSNGHAGGIHNWLVRANLTGGLDAL---LQQMGTGLLVTDV 377
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
MG G+N +TGDYS+GA G+W+ENGKIQY V EITI+G+L +M + IVA+ DV R++
Sbjct: 378 MGQGVNIVTGDYSRGAAGFWVENGKIQYPVAEITIAGQLSDMLRNIVAVADDVEQRSNIQ 437
Query: 446 SGSILIENMIIAG 458
+GS+LIE M ++G
Sbjct: 438 TGSLLIEKMKVSG 450
>gi|148245008|ref|YP_001219702.1| peptide maturation protein PmbA [Candidatus Vesicomyosocius
okutanii HA]
gi|146326835|dbj|BAF61978.1| peptide maturation protein PmbA [Candidatus Vesicomyosocius
okutanii HA]
Length = 439
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/442 (37%), Positives = 261/442 (59%), Gaps = 8/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+ AQ +++ KK + I + +G S VR GKI+ +E + DK ++ +Y+ + K
Sbjct: 5 LENTAQFAIDFLKKYDITDYEIFLSSSSGVSTAVRLGKIETLEHHLDKMFDINVYMGNKK 64
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++S+ D K+ + TI +A IA++T D F GL + + NP D LY PW L
Sbjct: 65 ----GHASSVDLNKQGIAKTIESACLIAKYTQEDLFNGLAPKELMAFNPPDLDLYYPWDL 120
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ +A RCE A I +++ +++ Q L NSHG M+ +KH + S
Sbjct: 121 DPSHSVDLAKRCETAALE-QKYIDSSDGAELSSFQGKDLYINSHGMMAAQQGAKHSLHCS 179
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA + ++MQ Y+ D L+ PE++G AA +++L ++ + +RKCPV+F + L
Sbjct: 180 IIAKQDRDMQTAYEYTVALDNFDLESPEVVGKKAANLAVNKLASRSLESRKCPVIFTSRL 239
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
+ L + ++G Y+KSTFL+DS+ + + S I ++E P + + GS +FD +GV
Sbjct: 240 SGGLFSQLMGALNGARQYKKSTFLLDSVDQLVMPSSISLLEKPLVKKTIGSKAFDQDGVL 299
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
+++ VKNG +Q Y + YSA +LG+KTT N+GG ++++I + K L E++K M+
Sbjct: 300 KKQQYFVKNGQVQSYIMGQYSANQLGLKTTANAGGVNNVMI---EHKFEGGLDEVIKNMH 356
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GL+VTELMG G+N TGDYS+GA G+W++NGKIQY V ITI+G L+ M I IGSD
Sbjct: 357 QGLVVTELMGQGVNDTTGDYSRGALGFWVDNGKIQYPVSGITIAGNLKEMLLGIEHIGSD 416
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
+ RN+ GS+LI+ M IAG+
Sbjct: 417 IDYRNNIKVGSVLIQQMTIAGE 438
>gi|384082282|ref|ZP_09993457.1| microcin-processing peptidase 1 [gamma proteobacterium HIMB30]
Length = 447
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 153/445 (34%), Positives = 265/445 (59%), Gaps = 10/445 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
K+ + L +L +K++GA + + G V R G+ + +E D+++++ +++
Sbjct: 11 KNRLEGLTTRILEQSKQVGADACEVAASASVGLDVQARLGQPEKLEMTRDQSLSITVFLG 70
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
+ + G++ST+D +L T+ AA IA+ TA D A L + + + D +L P
Sbjct: 71 ESR----GSASTTDLSDGALQRTLEAALAIAKVTAPDPAAVLASRDQIIQSVPDLELDHP 126
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
W + +A +A E+ ++ I N+E V++ + + + G + P S H +
Sbjct: 127 WDIDAKEALDLAIEVESFGRQADARITNSEGGSVSSTRGISVHGTTEGLLVSQPTSIHGM 186
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S +A G+ +R Y+ + P++L PE++G AA++T++RL +K T + PVLF
Sbjct: 187 SCVLLAEDGESRERSYAYTQSRRPEQLWSPEVVGREAAEKTVARLNPRKCQTAEVPVLFI 246
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
A LL+ F ISG SLYR+S++L+D LG ++F S + + E+P I G+ GSS++D +
Sbjct: 247 PETASGLLSSFISAISGGSLYRQSSYLLDRLGTEVFPSWVSLSENPLIPGAMGSSAYDGD 306
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
G+ T+++ V +G++ Y LS YSA +LG+++T N+GG +L + K +++ + ++
Sbjct: 307 GLATREQAFVTDGVLSSYVLSLYSANRLGLESTHNAGGVRNLFL-----KGNNDFQTLVS 361
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ-IVA 433
+M GL+VTELMG G+N + GDYS+GA G+W+ENG+I Y V E+T++ L M KQ +VA
Sbjct: 362 EMGQGLVVTELMGQGVNLVNGDYSRGASGFWVENGEIAYPVHEVTVASNLDRMLKQDLVA 421
Query: 434 IGSDVLTRNSNTSGSILIENMIIAG 458
+GSD+ R S T+GS+L E M++AG
Sbjct: 422 VGSDIDLRRSITTGSMLFEKMMVAG 446
>gi|302036858|ref|YP_003797180.1| protease pmbA [Candidatus Nitrospira defluvii]
gi|190343273|gb|ACE75661.1| peptidase U62 [Candidatus Nitrospira defluvii]
gi|300604922|emb|CBK41255.1| Protease PmbA [Candidatus Nitrospira defluvii]
Length = 452
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 163/460 (35%), Positives = 254/460 (55%), Gaps = 25/460 (5%)
Query: 12 IYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVII 71
+ ++ ++ +AQD+L A K GA+ S + +G SV VR G +D + + +K +
Sbjct: 4 VIAEQDYTNIAQDLLARAAKHGATASDVMVADGETLSVQVRMGAVDRLTKAREKRL---- 59
Query: 72 YIQDGKKMFYG----NSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPL 127
G ++F+G ++STSDF + SL + +A+ D +GLP+ +
Sbjct: 60 ----GLRVFFGQRSASASTSDFSRDSLERFVGETCALAQAVVEDPVSGLPEPGQFATDFP 115
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
+ ++ L D +A R E AF +S I N+E + +LANSHGF+ Y
Sbjct: 116 ELNIHDSTKLQTDQQIDLALRAERAAFAADSRITNSEGGECDSSSGRIILANSHGFVGHY 175
Query: 188 PFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTR 247
S +S+SPIA MQRD WY N KL+ PE IG A +RT+ +L A+K+ST
Sbjct: 176 ANSSFSLSVSPIASDAAGMQRDYWYGVNRAFAKLESPEAIGREATRRTVRKLGARKVSTC 235
Query: 248 KCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFG 307
+ PV+F+ +A LL+ +SG +LY+ ++FL+ LG++I + I +D + G G
Sbjct: 236 RVPVIFDPEVAGSLLSHLCSALSGYALYKGASFLIGQLGQQIAPDFVTIYDDGRMPGGLG 295
Query: 308 SSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGN---------SGGAHHLII 358
+ FD EG+ T+K+ +V+ G + Y L TYS KKLG+ +TGN S G + +
Sbjct: 296 TRPFDGEGLPTRKQAMVERGRLASYILDTYSGKKLGLPSTGNAARSIGESPSAGPTNFYM 355
Query: 359 ISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEI 418
+ T D +L + GL VT+L+G GIN +TGDYS+GA G+WIENG++ Y VEEI
Sbjct: 356 VPGTTSPED----ILASVKQGLYVTDLIGFGINMVTGDYSRGASGFWIENGELAYPVEEI 411
Query: 419 TISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
TI+G L+ M+ I IG+D++ R S ++ + M +AG
Sbjct: 412 TIAGNLKQMYANIETIGTDLVFRGRIASPTVKLAEMTLAG 451
>gi|384228111|ref|YP_005619846.1| PmbA protein [Buchnera aphidicola str. Ua (Uroleucon ambrosiae)]
gi|345539044|gb|AEO07911.1| PmbA protein [Buchnera aphidicola str. Ua (Uroleucon ambrosiae)]
Length = 446
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 159/413 (38%), Positives = 252/413 (61%), Gaps = 8/413 (1%)
Query: 46 GFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIA 105
G SV +R ++ +E N+D + + +Y K G S+ DF + + + A NI+
Sbjct: 41 GISVNIRNSIVENVEFNSDGALFITVY----NKFSKGTVSSKDFSMHGIKNMLEMAINIS 96
Query: 106 RFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNEN 165
++T+SD F+GLPD L N L+ L+ PW +I++A + E EAF F++ IVN+E
Sbjct: 97 KYTSSDFFSGLPDRKNLCFNALELDLFHPWEWNIENAIKFSVLSEQEAFKFDNRIVNSEG 156
Query: 166 TGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPE 225
+ + + NS G + Y +++ IA MQRD YS + L +PE
Sbjct: 157 SFFNGHMTINIFGNSLGMLQKYKSTRYSSYTCMIAKDQYSMQRDFDYSISRKIDNLLKPE 216
Query: 226 IIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSL 285
I+G +AKR +SRL +KKI+T K P++F + +++ + ISGN +Y+KSTFL++ L
Sbjct: 217 ILGQNSAKRAVSRLGSKKIATMKSPIIFLSSISYMFFSHLISAISGNHVYQKSTFLINDL 276
Query: 286 GKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMK 345
KIF + IIE+PHI GS FDNEGV T + +++NGI+Q + L++Y+A+KL +
Sbjct: 277 KNKIFPDWLDIIENPHIKQGLGSKPFDNEGVSTNIKYIIRNGILQTWLLNSYNARKLQLD 336
Query: 346 TTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYW 405
+TGN GG ++ ++ + S+ + E+LK MN G+L+TELMG G++ I G+YS+GA G+W
Sbjct: 337 STGNCGGIYNWLV----SHSNISFSELLKNMNKGILITELMGQGVDIINGNYSRGAVGFW 392
Query: 406 IENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
IE GKI Y + ITISG L++M+ IV+I +D+ RN+ GS+L+ + ++G
Sbjct: 393 IEQGKISYPIHGITISGNLRSMWDNIVSISNDIDIRNNIQCGSVLLSEIQVSG 445
>gi|219681467|ref|YP_002467852.1| PmbA protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)]
gi|257471142|ref|ZP_05635141.1| PmbA protein [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)]
gi|219624310|gb|ACL30465.1| PmbA protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)]
Length = 446
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 161/413 (38%), Positives = 257/413 (62%), Gaps = 8/413 (1%)
Query: 46 GFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIA 105
G SV VR ++ +E N+D + + +Y K G+ S+ DF K++ + ++ A NI+
Sbjct: 41 GISVNVRNNIVENVEFNSDGGLFITVY----NKFSKGSVSSKDFSIKNIKNMLDIAINIS 96
Query: 106 RFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNEN 165
++++SD F+GLPD L + ++ L+ PW +I++A ++ E AF F+ IVN+E
Sbjct: 97 KYSSSDFFSGLPDIKFLCFHSMELDLFHPWEFNIENAIKMSILSEKSAFEFDKRIVNSEG 156
Query: 166 TGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPE 225
+ + + + + NS G + Y +++ IA MQRD YS + L +PE
Sbjct: 157 SFLNSHTTINVFGNSLGVLEKYKSTRYSNYTCMIAKDKNSMQRDFDYSLSRRIDDLIKPE 216
Query: 226 IIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSL 285
I+G AKR ISRL ++KI T + P++F + ++ + A ISG+++Y+KSTFL++ L
Sbjct: 217 ILGQKTAKRAISRLGSRKIQTMRSPIIFSSEISHMFFSHLASAISGDNVYQKSTFLINDL 276
Query: 286 GKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMK 345
KIF + I E+PH+ GS FDNEGV T+ + ++K GI+Q + L+ Y+A+KL +
Sbjct: 277 KMKIFPDWLDIEENPHLKRGLGSKPFDNEGVATEIKYIIKAGILQTWLLNCYNARKLKLD 336
Query: 346 TTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYW 405
+TGN GG H+ ++SN+ S +E+LKKM+ G+LVTELMG G++ I G+YS+GA G+W
Sbjct: 337 STGNCGGIHNW-LVSNQNIS---FEELLKKMDQGILVTELMGQGVDIINGNYSRGAVGFW 392
Query: 406 IENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+E GKI Y + EITISG L+NM+ IV+I SDV RN+ GS+L+ + ++G
Sbjct: 393 VEKGKISYPINEITISGNLRNMWNNIVSISSDVDRRNNIQCGSVLLSEIQVSG 445
>gi|254467824|ref|ZP_05081230.1| peptidase U62, modulator of DNA gyrase [beta proteobacterium KB13]
gi|207086634|gb|EDZ63917.1| peptidase U62, modulator of DNA gyrase [beta proteobacterium KB13]
Length = 446
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 164/446 (36%), Positives = 266/446 (59%), Gaps = 8/446 (1%)
Query: 13 YSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIY 72
Y++ + + L +D++ +KK+GA + ++ + +G ++ VR ++ E NNDKN+ + +Y
Sbjct: 8 YTEEKLKNLCEDIITQSKKLGAESAEVDVSIASGKNLTVRNEDVETFEINNDKNVTLTLY 67
Query: 73 IQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLY 132
Q+G+K S+SDF KK++ I+ + N+ + T D + G+ +++ ++
Sbjct: 68 -QNGRKSVV---SSSDFSKKTIQHLIDNSLNMLKVTEQDPYFGIVEQDLHPKKTRPVDIF 123
Query: 133 TPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKH 192
P LS DD IA + E+ A +++ I N+E + S F+ ANS+ F G+P S++
Sbjct: 124 YPQELSFDDMLEIAKKTESSAKSYDERITNSEGATINYSSSIFMYANSNQFFGGFPGSRY 183
Query: 193 IISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252
+ S I K + MQR YS+ D + L P +G AAK TI RL KKI T K P++
Sbjct: 184 SLYCSVIGSKDQTMQRSYDYSNVRDFRDLKNPIQLGEEAAKNTIDRLNVKKIKTGKYPII 243
Query: 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFD 312
F ++ ++N ISG +LYR+++FL+D++G KI S + I E P ++ S+ FD
Sbjct: 244 FHNTISDAIINPILSAISGRNLYRQNSFLLDTIGTKIASDKLTISERPLLIKGHASTYFD 303
Query: 313 NEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEM 372
+EGV+ +V GI+ Y LS YSAKKL + TTGN+GG H+LI + +L +M
Sbjct: 304 DEGVEVFDNTLVDQGILNRYLLSNYSAKKLNLATTGNAGGTHNLIFEHHNI----SLAQM 359
Query: 373 LKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIV 432
+K +N G L+TEL+G G+N + GD+S+GA G +IENG+IQ++VEEITI+G L++M I
Sbjct: 360 IKDINKGFLITELLGHGVNMVNGDFSRGAAGLYIENGEIQHAVEEITIAGNLKDMAMDIY 419
Query: 433 AIGSDVLTRNSNTSGSILIENMIIAG 458
+I D + +S GS+L+E M +
Sbjct: 420 SIADDANSNSSKYIGSVLVEKMAVGA 445
>gi|335420274|ref|ZP_08551312.1| PmbA protein [Salinisphaera shabanensis E1L3A]
gi|334894633|gb|EGM32818.1| PmbA protein [Salinisphaera shabanensis E1L3A]
Length = 457
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 153/436 (35%), Positives = 244/436 (55%), Gaps = 8/436 (1%)
Query: 23 QDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYG 82
+++L+ A++ GA + + + SV R + + +E D+ ++ +Y GK+ G
Sbjct: 29 RELLDEARQRGADEAEVSISASRALSVTARARRRESVEHEGDRAASLTVYC--GKRT--G 84
Query: 83 NSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDA 142
++ST+D L ++ A IARFT +D+FAGL D + + L+ PW L + A
Sbjct: 85 SASTTDLSGDGLRAALDQALTIARFTEADDFAGLADAQLMAREHPELSLFHPWSLDAERA 144
Query: 143 KLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIK 202
+A E A ++++ IV E V ++ + NSHGF+ S+H +S P+A
Sbjct: 145 LEMALELEAAALDYDARIVQTEGATVASRDGISVYGNSHGFVGTERASQHALSCQPLARA 204
Query: 203 GKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELL 262
MQR+ +S L +G A +R +SRL AK T VLF +A L
Sbjct: 205 DSGMQREVAFSQARHADDLQSVAAVGRLAGERAVSRLGAKTPPTTTASVLFTPRVARGLW 264
Query: 263 NIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRL 322
ISG +LYR ++FL D + + I + + + PH L S++FD +GV T++R
Sbjct: 265 GHLIGAISGGTLYRNASFLKDKIDESIAIEGLTLSQHPHRLRGLASAAFDGDGVATRERT 324
Query: 323 VVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLV 382
+V+NG+++GY LS Y+A++LGM +TGN+GG +L + D+ ++ M+ GL+V
Sbjct: 325 LVENGVLRGYVLSAYTARRLGMTSTGNAGGVFNLDVAPGH----DDFDALVAGMSRGLVV 380
Query: 383 TELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRN 442
TELMG G+N + GDYS+GA G+W+ENG+I Y VE TI+G L +M++ I A+GSDV
Sbjct: 381 TELMGQGVNLVNGDYSRGAAGFWVENGEIAYPVENATIAGNLADMYRGIDALGSDVDLGA 440
Query: 443 SNTSGSILIENMIIAG 458
+ + S+LI +M IAG
Sbjct: 441 ALRTPSVLIGSMTIAG 456
>gi|110833401|ref|YP_692260.1| pmbA protein [Alcanivorax borkumensis SK2]
gi|110646512|emb|CAL15988.1| pmbA protein [Alcanivorax borkumensis SK2]
Length = 451
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/435 (35%), Positives = 251/435 (57%), Gaps = 9/435 (2%)
Query: 25 MLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNS 84
++ AK+ GA + + + G+SV VR+G+++ +E + D+ ++V +Y K + G++
Sbjct: 26 LIEEAKRQGADAAEVGVSLSQGYSVNVRQGEVETVEFHRDRGVSVTVY----KGLRKGHA 81
Query: 85 STSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKL 144
S+SD + SL DT+ AA IA +T D +AGL N L + + LY PW + A
Sbjct: 82 SSSDDNRDSLRDTLAAATAIAGYTEEDRYAGLAPANQLASDVANLDLYHPWAMDTQSAIE 141
Query: 145 IAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK 204
A CE A + ++ IVN+E V + S + A S GF+ GY + H S +A
Sbjct: 142 DALHCEAVARD-DARIVNSEGASVNSGASLRVYATSEGFLHGYRGTNHSRVCSVVAEDDA 200
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
MQRD WY +L E +G A +R ++RL A+ T + PV+F +A LL
Sbjct: 201 GMQRDYWYDGGRVGDQLASAEEVGLRARERALARLGAQVPETGELPVIFAPEVASGLLGH 260
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
ISG +LYR+S+FL DSLGK + + Q+ E+PH+ S+ FD +G+ T+ + V
Sbjct: 261 LVSAISGGALYRRSSFLQDSLGKPVLPAGFQLTENPHLPAGNASAPFDGDGLPTRPQAFV 320
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
++G+++ Y L Y++++L M TGN GG ++ + T + D+L ++ K+ G+L+TE
Sbjct: 321 EDGVLKQYALGLYASRRLNMAPTGNGGGVRNVRL----TDTGDSLAALMAKVPKGILITE 376
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
+MG GIN +TGDYS+GA G+W ENG ++ +++E TI+G L M + I G+DV R +
Sbjct: 377 VMGQGINLVTGDYSRGASGFWFENGVVKGALQEFTIAGHLGEMLRGIQGSGTDVDYRGNI 436
Query: 445 TSGSILIENMIIAGK 459
GS+L+ + +AG+
Sbjct: 437 ACGSLLLSPIKVAGR 451
>gi|219682023|ref|YP_002468407.1| PmbA protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)]
gi|219621756|gb|ACL29912.1| PmbA protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)]
Length = 446
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 160/413 (38%), Positives = 256/413 (61%), Gaps = 8/413 (1%)
Query: 46 GFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIA 105
G SV VR ++ +E N+D + + +Y K G+ S+ DF K++ + ++ A NI+
Sbjct: 41 GISVNVRNNIVENVEFNSDGGLFITVY----NKFSKGSVSSKDFSIKNIKNMLDIAINIS 96
Query: 106 RFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNEN 165
++++SD F+GLPD L + ++ L+ PW +I++A ++ E AF + IVN+E
Sbjct: 97 KYSSSDFFSGLPDIKFLCFHSMELDLFHPWEFNIENAIKMSILSEKSAFESDKRIVNSEG 156
Query: 166 TGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPE 225
+ + + + + NS G + Y +++ IA MQRD YS + L +PE
Sbjct: 157 SFLNSHTTINVFGNSLGVLEKYKSTRYSHYTCMIAQDKNSMQRDFDYSLSRRIDDLIKPE 216
Query: 226 IIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSL 285
I+G AKR ISRL ++KI T + P++F + ++ + A ISG+++Y+KSTFL++ L
Sbjct: 217 ILGQKTAKRAISRLGSRKIQTMRSPIIFSSEISHMFFSHLASAISGDNVYQKSTFLINDL 276
Query: 286 GKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMK 345
KIF + I E+PH+ GS FDNEGV T+ + ++K GI+Q + L+ Y+A+KL +
Sbjct: 277 KMKIFPDWLDIEENPHLKRGLGSKPFDNEGVATEIKYIIKAGILQTWLLNCYNARKLKLD 336
Query: 346 TTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYW 405
+TGN GG H+ ++SN+ S +E+LKKM+ G+LVTELMG G++ I G+YS+GA G+W
Sbjct: 337 STGNCGGIHNW-LVSNQNIS---FEELLKKMDQGILVTELMGQGVDIINGNYSRGAVGFW 392
Query: 406 IENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+E GKI Y + EITISG L+NM+ IV+I SDV RN+ GS+L+ + ++G
Sbjct: 393 VEKGKISYPINEITISGNLRNMWNNIVSISSDVDRRNNIQCGSVLLSEIQVSG 445
>gi|384226955|ref|YP_005618705.1| PmbA protein [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)]
gi|311085831|gb|ADP65913.1| PmbA protein [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)]
Length = 446
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 160/413 (38%), Positives = 256/413 (61%), Gaps = 8/413 (1%)
Query: 46 GFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIA 105
G SV VR ++ +E N+D + + +Y K G+ S+ DF K++ + ++ A NI+
Sbjct: 41 GISVNVRNNIVENVEFNSDGGLFITVY----NKFSKGSVSSKDFSIKNIKNMLDIAINIS 96
Query: 106 RFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNEN 165
++++SD F+GLPD L + ++ L+ PW +I++A ++ E AF + IVN+E
Sbjct: 97 KYSSSDFFSGLPDIKFLCFHSMELDLFHPWEFNIENAIKMSILSEKSAFESDKRIVNSEG 156
Query: 166 TGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPE 225
+ + + + + NS G + Y +++ IA MQRD YS + L +PE
Sbjct: 157 SFLNSHTTINVFGNSLGVLEKYKSTRYSNYTCMIAQDKNSMQRDFDYSLSRRIDDLIKPE 216
Query: 226 IIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSL 285
I+G AKR ISRL ++KI T + P++F + ++ + A ISG+++Y+KSTFL++ L
Sbjct: 217 ILGQKTAKRAISRLGSRKIQTMRSPIIFSSEISHMFFSHLASAISGDNVYQKSTFLINDL 276
Query: 286 GKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMK 345
KIF + I E+PH+ GS FDNEGV T+ + ++K GI+Q + L+ Y+A+KL +
Sbjct: 277 KMKIFPDWLDIEENPHLKRGLGSKPFDNEGVATEIKYIIKAGILQTWLLNCYNARKLKLD 336
Query: 346 TTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYW 405
+TGN GG H+ ++SN+ S +E+LKKM+ G+LVTELMG G++ I G+YS+GA G+W
Sbjct: 337 STGNCGGIHNW-LVSNQNIS---FEELLKKMDQGILVTELMGQGVDVINGNYSRGAVGFW 392
Query: 406 IENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+E GKI Y + EITISG L+NM+ IV+I SDV RN+ GS+L+ + ++G
Sbjct: 393 VEKGKISYPINEITISGNLRNMWNNIVSISSDVDRRNNIQCGSVLLSEIQVSG 445
>gi|359397065|ref|ZP_09190115.1| Protein pmbA [Halomonas boliviensis LC1]
gi|357968859|gb|EHJ91308.1| Protein pmbA [Halomonas boliviensis LC1]
Length = 446
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 165/429 (38%), Positives = 249/429 (58%), Gaps = 9/429 (2%)
Query: 30 KKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDF 89
K++GA + + + G V VR+G+++ +E + D+ + V +Y+ K G++S++D
Sbjct: 26 KRLGADAAEVGASVDQGIGVSVRQGEVETVELSRDQGIAVTLYVGQRK----GSASSTDA 81
Query: 90 CKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRC 149
S+ + A IAR+T D GL D + + D K++ PW L+ D+A +A C
Sbjct: 82 SSASIQAAVEKALAIARYTGEDPATGLADASLMATELPDLKVHYPWALTTDEAIELALAC 141
Query: 150 ENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRD 209
E + I ++ +++ + + ANSHGF+ S H +S IA MQRD
Sbjct: 142 EQAGRDVEG-ISQSDGASLSSGEGVRVYANSHGFLGTQKGSSHSLSCMLIAQDAAGMQRD 200
Query: 210 NWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLI 269
Y+S DPK L P +G AA RT+ RL AK+ T PVLF+ LA L+ +
Sbjct: 201 YDYTSARDPKTLRDPAEVGREAAARTLRRLGAKRPPTGTFPVLFDPSLASGLIGHLLGGL 260
Query: 270 SGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGII 329
+G +LYR+++FL D LG +F + E P +G+ SS FD EGV+T+ + G I
Sbjct: 261 AGGALYRQASFLCDRLGTPLFPDWFSLEERPMEIGATASSPFDGEGVQTRNNRFIDQGSI 320
Query: 330 QGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDG 389
Y LS YSA++L M TTGN+GGA ++ +++ +S D+L L++M G+ VTELMG G
Sbjct: 321 ASYMLSAYSARRLDMHTTGNAGGARNVRLVA-PLQSRDSL---LQEMGRGIWVTELMGQG 376
Query: 390 INYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSI 449
+N +TGDYS+GA G+W+ENG++QY VEE TI+G L+ MF +V IG D TR S +GS
Sbjct: 377 VNGVTGDYSRGAAGFWVENGQVQYPVEEFTIAGNLERMFAGLVGIGDDTDTRGSVHTGSW 436
Query: 450 LIENMIIAG 458
LI+ M +AG
Sbjct: 437 LIDAMTVAG 445
>gi|256821868|ref|YP_003145831.1| peptidase U62 modulator of DNA gyrase [Kangiella koreensis DSM
16069]
gi|256795407|gb|ACV26063.1| peptidase U62 modulator of DNA gyrase [Kangiella koreensis DSM
16069]
Length = 454
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 170/445 (38%), Positives = 265/445 (59%), Gaps = 11/445 (2%)
Query: 14 SKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYI 73
++ +F+ + Q L A GA S I G S+ VR+G+++ +E N D + + +Y
Sbjct: 19 TEQQFRLMVQVALQQAADAGADQSEIWCYNTIGNSIEVRQGELETLEFNQDSHFGINVYF 78
Query: 74 QDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYT 133
K G S +D + +++ + AA IA FT D FAGL D+ + D +L
Sbjct: 79 GQRK----GTVSINDLTETAVHKGVQAACEIAAFTEPDPFAGLVDKELMATEFKDLQLDH 134
Query: 134 PWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHI 193
P L+I A CE A ++ I +E +S L ANS+GF+ ++
Sbjct: 135 PNDLTIPQMVESAKACEAVALK-DARIKQSEGVSSYNHRSVSLYANSYGFIGANHTTRFS 193
Query: 194 ISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLF 253
+S S IA M RD +Y+ D L PE +G AA+R I++LK KI + PV+F
Sbjct: 194 LSNSVIAETDNGMIRDGYYTIGRDVADLLSPENVGELAAERVINKLKQGKIPSGNYPVIF 253
Query: 254 EAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDN 313
A LA L + + G +LY++++FL+D + I +QI EDP +L FGS ++D+
Sbjct: 254 NAELARGLWSHMLSALKGAALYQRASFLLDKRNQLILPEFVQIEEDPFLLKGFGSGNYDS 313
Query: 314 EGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD-NLKEM 372
+GV T+KR +V +G+++ YFLS YSA++LG++TTGN+GG H++II KS D +L++
Sbjct: 314 DGVATRKRDIVVDGVLKDYFLSGYSARRLGLQTTGNAGGIHNIII-----KSMDVSLQDT 368
Query: 373 LKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIV 432
+K++ +GLL+TE+MG G+N +TG+YS+GA G+W ENG+IQ+ +E+TI+G L+ MFK IV
Sbjct: 369 MKQLGSGLLLTEVMGQGVNTVTGNYSRGASGFWFENGEIQFFAQELTIAGNLETMFKNIV 428
Query: 433 AIGSDVLTRNSNTSGSILIENMIIA 457
AI +DV R+S +GS+ IE M++A
Sbjct: 429 AISNDVDDRSSILTGSVAIEGMMVA 453
>gi|414562448|ref|YP_005617639.1| PmbA protein [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)]
gi|311086984|gb|ADP67064.1| PmbA protein [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)]
Length = 446
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 160/413 (38%), Positives = 256/413 (61%), Gaps = 8/413 (1%)
Query: 46 GFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIA 105
G SV VR ++ +E N+D + + +Y K G+ S+ DF K++ + ++ A NI+
Sbjct: 41 GISVNVRNNIVENVEFNSDGGLFITVY----NKFSKGSVSSKDFSIKNIKNMLDIAINIS 96
Query: 106 RFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNEN 165
++++SD F+GLPD L + ++ L+ PW +I++A ++ E AF + IVN+E
Sbjct: 97 KYSSSDFFSGLPDIKFLCFHSMELDLFHPWEFNIENAIKMSILSEKSAFESDKRIVNSEG 156
Query: 166 TGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPE 225
+ + + + + NS G + Y +++ IA MQRD YS + L +PE
Sbjct: 157 SFLNSHTTINVFGNSLGVLEKYKSTRYSNYTCMIAQDKNSMQRDFDYSLSRRIDDLIKPE 216
Query: 226 IIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSL 285
I+G AKR ISRL ++KI T + P++F + ++ + A ISG+++Y+KSTFL++ L
Sbjct: 217 ILGQKTAKRAISRLGSRKIQTMRSPIIFSSEISHMFFSHLASAISGDNVYQKSTFLINDL 276
Query: 286 GKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMK 345
KIF + I E+PH+ GS FDNEGV T+ + ++K GI+Q + L+ Y+A+KL +
Sbjct: 277 KMKIFPDWLDIEENPHLKRGLGSKPFDNEGVATEIKYIIKAGILQTWLLNCYNARKLKLD 336
Query: 346 TTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYW 405
+TGN GG H+ ++SN+ S +E+LKKM+ G+LVTELMG G++ I G+YS+GA G+W
Sbjct: 337 STGNCGGIHNW-LVSNQNIS---FEELLKKMDQGILVTELMGQGVDIINGNYSRGAVGFW 392
Query: 406 IENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+E GKI Y + EITISG L+NM+ IV+I SDV RN+ GS+L+ + ++G
Sbjct: 393 VEKGKISYPINEITISGNLRNMWNNIVSISSDVDRRNNIQCGSVLLSEIQVSG 445
>gi|384225897|ref|YP_005617060.1| PmbA protein [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)]
gi|311086404|gb|ADP66485.1| PmbA protein [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)]
Length = 446
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 159/413 (38%), Positives = 256/413 (61%), Gaps = 8/413 (1%)
Query: 46 GFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIA 105
G SV VR ++ +E N+D + + +Y K G+ S+ DF K++ + ++ A NI+
Sbjct: 41 GISVNVRNNIVENVEFNSDGGLFITVY----NKFSKGSVSSKDFSIKNIKNMLDIAINIS 96
Query: 106 RFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNEN 165
++++SD F+GLPD L + ++ L+ PW +I++A ++ E AF + IVN+E
Sbjct: 97 KYSSSDFFSGLPDIKFLCFHSMELDLFHPWEFNIENAIKMSILSEKSAFESDKRIVNSEG 156
Query: 166 TGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPE 225
+ + + + + NS G + Y +++ IA MQRD YS + L +PE
Sbjct: 157 SFLNSHTTINVFGNSLGVLEKYKSTRYSNYTCMIAQDKNSMQRDFDYSLSRRIDDLIKPE 216
Query: 226 IIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSL 285
I+G AKR ISRL ++KI T + P++F + ++ + A ISG+++Y+KSTFL++ L
Sbjct: 217 ILGQKTAKRAISRLGSRKIQTMRSPIIFSSEISHMFFSHLASAISGDNVYQKSTFLINDL 276
Query: 286 GKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMK 345
KIF + I E+PH+ GS FDNEGV T+ + ++K GI+Q + L+ Y+A+KL +
Sbjct: 277 KMKIFPDWLDIEENPHLKRGLGSKPFDNEGVATEIKYIIKAGILQTWLLNCYNARKLKLD 336
Query: 346 TTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYW 405
+TGN GG H+ ++SN+ S +E+LKKM+ G+LVTELMG G++ I G+YS+GA G+W
Sbjct: 337 STGNCGGIHNW-LVSNQNIS---FEELLKKMDQGILVTELMGQGVDIINGNYSRGAVGFW 392
Query: 406 IENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+E GKI Y + EITISG L+NM+ IV+I SD+ RN+ GS+L+ + ++G
Sbjct: 393 VEKGKISYPINEITISGNLRNMWNNIVSISSDIDRRNNIQCGSVLLSEIQVSG 445
>gi|226940661|ref|YP_002795735.1| PmbA [Laribacter hongkongensis HLHK9]
gi|226715588|gb|ACO74726.1| PmbA [Laribacter hongkongensis HLHK9]
Length = 365
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/323 (44%), Positives = 214/323 (66%), Gaps = 4/323 (1%)
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
LS+DDA +A E A ++ I N+E V++ S F+ ANS GF GY ++H +S
Sbjct: 46 LSVDDAIELARETEAAARAVDARINNSEGGSVSSHLSQFVYANSQGFCQGYASTRHSLSA 105
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
+ +A G+ MQRD WYSS P+ L +G A +RT+ RL ++ T PVLF+
Sbjct: 106 AVVASDGESMQRDYWYSSTRHPEDLLSAAEVGRMAGERTVRRLGGRQAPTGVFPVLFDPM 165
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
+A L++ F SG +LYRK++FLVD+ G ++F+ I + EDP IL S +FDNEGV
Sbjct: 166 MAAGLIDHFVSAASGGALYRKASFLVDTAGTQVFNPVITLEEDPFILRGMASGAFDNEGV 225
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T+ R VV+ G++ GYFLS+YSA+KLG+ +TGN+GG+H+L + S + + E+++ +
Sbjct: 226 ATRARTVVEQGVLTGYFLSSYSARKLGLASTGNAGGSHNLTLAS----TGQSFDELVRMV 281
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
GLLVTEL+G G+N +TGDYS+GA G+WIENG+I Y VEEITI+ L+++++ ++A+G+
Sbjct: 282 GRGLLVTELLGHGVNTVTGDYSRGAAGFWIENGEIAYPVEEITIAANLKDLYRGMIAVGT 341
Query: 437 DVLTRNSNTSGSILIENMIIAGK 459
D R +GS+L+E M IAG+
Sbjct: 342 DRQVRGGKRTGSVLVERMTIAGQ 364
>gi|339477954|ref|YP_004706774.1| putative PmbA/TldD family protein [Candidatus Moranella endobia
PCIT]
gi|338172505|gb|AEI74906.1| putative PmbA/TldD family protein [Candidatus Moranella endobia
PCIT]
Length = 452
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 158/445 (35%), Positives = 265/445 (59%), Gaps = 9/445 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+ + + L+ A+ ++ + + + G S+ R G+++ +E N+D +++ +Y Q
Sbjct: 17 RKRLEHVVAQALDMARS-RSTDAEVAVTKTTGISISTRYGEVENVEFNSDSVLSINVYYQ 75
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K G++S+++ ++++ +T++AA NI R+T+ D AGL D+ L D L+ P
Sbjct: 76 QRK----GSASSTNLSQEAIANTVDAAVNIVRYTSPDPAAGLADKQLLAFEAPDLDLFHP 131
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
L + +A E A + + I + S + NSHG + Y S H +
Sbjct: 132 VELDAERGIALAAEAEQTALDSDKRITQTAGGNFNSHFSTHIFGNSHGMLQSYSSSLHSL 191
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
S S IA G +M+R+ Y+ D K L P+ +G A+RT++ L +K+ T + PVLF
Sbjct: 192 SCSVIAGSGSKMERNYAYTIGRDFKDLRLPQWVGEECARRTVTHLYPRKLLTMEVPVLFA 251
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
A + L ISG ++YRKSTFL+D LG+ + + I E PH+ S+ FD+E
Sbjct: 252 AEVTNGLFGPLVEAISGENIYRKSTFLLDLLGQAVLPEWLSINEYPHLQKGLASAPFDSE 311
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLK 374
GV+T+ ++V++G++ + L++Y+A+KLG+K+TG++GG ++ I +T +L +LK
Sbjct: 312 GVRTRNMVIVQDGLLSTWLLNSYAARKLGLKSTGHAGGIYNWCISQQQT----DLTGLLK 367
Query: 375 KMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAI 434
+M+ GL+VTELMG GIN ITGDYS+GA G+W++NG+IQY+V ITI+G L++M + IV++
Sbjct: 368 QMDRGLMVTELMGQGINIITGDYSRGAAGFWVQNGEIQYAVSGITIAGNLRDMLRNIVSV 427
Query: 435 GSDVLTRNSNTSGSILIENMIIAGK 459
G D TRN+ GS+L+ M IAG+
Sbjct: 428 GQDTETRNNIQCGSVLLSAMKIAGQ 452
>gi|386016467|ref|YP_005934754.1| protein PmbA [Pantoea ananatis AJ13355]
gi|327394536|dbj|BAK11958.1| protein PmbA [Pantoea ananatis AJ13355]
Length = 457
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 255/459 (55%), Gaps = 6/459 (1%)
Query: 2 EQLIKNRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQ 61
+Q+ + +S+ + LA ++ A + GAS + + FNE G + +R+G++ +
Sbjct: 4 KQVAAMANTLAHSRVQLSDLADSVIRMALQEGASDAQVMFNESTGLLLEMRQGRLKTRTR 63
Query: 62 NNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENT 121
+ ++ + +Y + G +S++++ SL +T+ AA IA +T D FAGL +
Sbjct: 64 ASQSSLFLTVY----RGHHQGTTSSTNYSSASLRETVQAACRIAGYTGEDRFAGLAEARF 119
Query: 122 LEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSH 181
L + L+ PW L DA +A R E + ++++ T V T S + NSH
Sbjct: 120 LCRASDELDLWHPWNLDEADATALAQRIEAGIVSAGDDVISDGVT-VHTGHSDCFIMNSH 178
Query: 182 GFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKA 241
GF S H+++ +A K D +S + L PE IG A I+ L
Sbjct: 179 GFSCSERQSNHLMAARALARKQNRSLLDFHFSVARHAQSLMAPEEIGRRAGNGAIAALDT 238
Query: 242 KKI-STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDP 300
+ +++CPVLF+A A LL+ + SG+ LY +++FL D LG+ +FS H+ + EDP
Sbjct: 239 APLQGSQRCPVLFDAKCALSLLDHLVQATSGSVLYHRNSFLADRLGETVFSDHVSVTEDP 298
Query: 301 HILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIIS 360
S SFD +G+ R +V +GI+ G+FLS Y+A+ L M TGN G +L + S
Sbjct: 299 FAPQGLASRSFDGDGIGGTTRKIVNHGILAGFFLSAYAARHLDMAPTGNGWGPGNLSLTS 358
Query: 361 NKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITI 420
+ T+ D+ M+KK++TGL+VT G G I GDYS+ G+W E G+I+Y+V+ +T+
Sbjct: 359 SLTQKGDDFDAMVKKLHTGLIVTSFSGGGPRLINGDYSRSLRGFWAEGGQIRYAVDGVTV 418
Query: 421 SGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+G L MF+ IVAIG+DV+T+ + TSGS+LI+N+ +AG+
Sbjct: 419 AGNLAEMFRNIVAIGTDVITQGALTSGSVLIDNLQVAGR 457
>gi|386078663|ref|YP_005992188.1| copper-exporting ATPase PmbA [Pantoea ananatis PA13]
gi|354987844|gb|AER31968.1| copper-exporting ATPase PmbA [Pantoea ananatis PA13]
Length = 457
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 155/450 (34%), Positives = 250/450 (55%), Gaps = 6/450 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
+S+ + LA ++ A + GAS + + FNE G + +R+G++ + + ++ +
Sbjct: 13 LAHSRVQLSDLADSVIRMALQEGASDAQVMFNESTGLLLEMRQGRLKTRTRASQSSLFLT 72
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y + G +S++++ SL +T+ AA IA +T D FAGL + L +
Sbjct: 73 VY----RGHHQGTTSSTNYSSASLRETVQAACRIAGYTGEDRFAGLAEARFLCRASDELD 128
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
L+ PW L DA +A R E + ++++ T V T S + NSHGF S
Sbjct: 129 LWHPWNLDEADATALAQRIEAGIVSAGDDVISDGVT-VHTGHSDCFIMNSHGFSCSERQS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI-STRKC 249
H+++ +A K D +S + L PE IG A I+ L + +++C
Sbjct: 188 NHLMAARALARKQNRSLLDFHFSVARHAQSLMAPEEIGRRAGNGAIAALDTAPLQGSQRC 247
Query: 250 PVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSS 309
PVLF+A A LL+ + SG+ LY +++FL D LG+ +FS H+ + EDP S
Sbjct: 248 PVLFDAKCALSLLDHLVQATSGSVLYHRNSFLADRLGETVFSDHVSVTEDPFAPQGLASR 307
Query: 310 SFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNL 369
SFD +G+ R +V GI+ G+FLS Y+A+ L M TGN G +L + S+ T+ D+
Sbjct: 308 SFDGDGIGGTTRKIVNQGILAGFFLSAYAARHLDMAPTGNGWGPGNLSLTSSLTQKGDDF 367
Query: 370 KEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFK 429
M+KK++TGL+VT G G I GDYS+ G+W E G+I+Y+V+ +T++G L MF+
Sbjct: 368 DAMVKKLHTGLIVTSFSGGGPRLINGDYSRSLRGFWAEGGQIRYAVDGVTVAGNLAEMFR 427
Query: 430 QIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+DV+T+ + TSGS+LI+N+ +AG+
Sbjct: 428 NIVAIGTDVITQGALTSGSVLIDNLQVAGR 457
>gi|407803697|ref|ZP_11150530.1| pmbA protein [Alcanivorax sp. W11-5]
gi|407022300|gb|EKE34054.1| pmbA protein [Alcanivorax sp. W11-5]
Length = 451
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 165/442 (37%), Positives = 256/442 (57%), Gaps = 9/442 (2%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
++ A+ +L A++ GA+ + + + G G SV VR G+I+ +E + D+ ++V +++ K
Sbjct: 19 LRERARRVLAEAERQGATAAEVGISAGQGLSVTVRLGEIETLEFHRDRAVSVTLFVGQRK 78
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++S+SD + S+ +T+ AA IA T D +GL + L + D L W L
Sbjct: 79 ----GSASSSDDSEDSIRETVAAALAIAGQTGEDPHSGLAEPELLAQDIPDLDLCHVWPL 134
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ DA A +CE A + IVN+E V++ S + ANS+GF+ Y S H S
Sbjct: 135 TPADAIEQAQQCEA-AGRTDERIVNSEGASVSSSVSVRVYANSNGFLGAYAGSHHSRSCV 193
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
+A + MQRD WY S DP L P +G AA RT++RL A + +T + PVLF +
Sbjct: 194 LVAEQDDAMQRDYWYDSQRDPAALMAPAEVGQRAASRTLARLGAARPATGEYPVLFAPEV 253
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A L+ F ISG +LYRK++FL D L ++F + I E P + G S+ FD++G+
Sbjct: 254 ARGLIGHFTSAISGGALYRKASFLRDRLNSQVFPEWVTIAEQPRLRGGAASAPFDSDGIA 313
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T+ + V+ G++ Y L Y+A++LG+ TGN GG +L I T ++ + ++M
Sbjct: 314 TRDQAFVEQGMLVRYALGLYAARRLGLAPTGNGGGVRNLRI----THGDEDQAALCRRMG 369
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
G+LVTE+MG G+N +TGDYS+GA G+ +ENG+I +EE TI+G L +MF +VA GSD
Sbjct: 370 NGILVTEVMGQGVNLVTGDYSRGASGFRVENGEISEPLEEFTIAGHLGDMFASLVASGSD 429
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
V R GS+L+ + IAG+
Sbjct: 430 VDQRGHIHCGSLLLAPLKIAGR 451
>gi|291618138|ref|YP_003520880.1| PmbA [Pantoea ananatis LMG 20103]
gi|378766444|ref|YP_005194906.1| microcin-processing peptidase 1 [Pantoea ananatis LMG 5342]
gi|291153168|gb|ADD77752.1| PmbA [Pantoea ananatis LMG 20103]
gi|365185919|emb|CCF08869.1| microcin-processing peptidase 1 [Pantoea ananatis LMG 5342]
Length = 449
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/450 (34%), Positives = 250/450 (55%), Gaps = 6/450 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
+S+ + LA ++ A + GAS + + FNE G + +R+G++ + + ++ +
Sbjct: 5 LAHSRVQLLDLADSVIRMALQEGASDAQVMFNESTGLLLEMRQGRLKTRTRASQSSLFLT 64
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
+Y + G +S++++ SL +T+ AA IA +T D FAG+ + L +
Sbjct: 65 VY----RGHHQGTTSSTNYSSASLRETVQAACRIAGYTGEDRFAGMAEARFLCRASDELD 120
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
L+ PW L DA +A R E + ++++ T V T S + NSHGF S
Sbjct: 121 LWHPWNLDEADATALAQRIEAGIVSAGDDVISDGVT-VHTGHSDCFIMNSHGFSCSERQS 179
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI-STRKC 249
H+++ +A K D +S + L PE IG A I+ L + +++C
Sbjct: 180 NHMMAARALARKQNRSLLDFHFSVARHAQSLMAPEEIGRRAGNGAIAALDTAPLQGSQRC 239
Query: 250 PVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSS 309
PVLF+A A LL+ + SG+ LY +++FL D LG+ +FS H+ + EDP S
Sbjct: 240 PVLFDAKCALSLLDHLVQATSGSVLYHRNSFLADRLGETVFSDHVSVTEDPFAPQGLASR 299
Query: 310 SFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNL 369
SFD +G+ R +V GI+ G+FLS Y+A+ L M TGN G +L + S+ T+ D+
Sbjct: 300 SFDGDGIGGTTRKIVNQGILAGFFLSAYAARHLDMAPTGNGWGPGNLSLTSSLTQKGDDF 359
Query: 370 KEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFK 429
M+KK++TGL+VT G G I GDYS+ G+W E G+I+Y+V+ +T++G L MF+
Sbjct: 360 DAMVKKLHTGLIVTSFSGGGPRLINGDYSRSLRGFWAEGGQIRYAVDGVTVAGNLAEMFR 419
Query: 430 QIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVAIG+DV+T+ + TSGS+LI+N+ +AG+
Sbjct: 420 NIVAIGTDVITQGALTSGSVLIDNLQVAGR 449
>gi|440509874|ref|YP_007347310.1| protein pmbA [Candidatus Blochmannia chromaiodes str. 640]
gi|440454087|gb|AGC03579.1| protein pmbA [Candidatus Blochmannia chromaiodes str. 640]
Length = 446
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 160/415 (38%), Positives = 243/415 (58%), Gaps = 12/415 (2%)
Query: 46 GFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIA 105
G +V R GK++ +E NN +++ I+ Q K GN+ ++D KK++ T+ AA +IA
Sbjct: 41 GITVSTRYGKLENVEFNNRSILDITIFRQQRK----GNALSNDLNKKAINRTVAAAADIA 96
Query: 106 RFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNEN 165
+T+ D +AG+ D+ L N ++ L+ P L +A E A ++ I+ E
Sbjct: 97 SYTSPDPYAGIADKELLAFNSMNLDLFHPISLDTKLGVTLASTAEETALKYDKRIIYTEG 156
Query: 166 TGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPE 225
+ + + NSHG + Y S+H + IA M+++ Y+ + L E
Sbjct: 157 GRFNSYFTTKVFGNSHGMLQSYTSSRHSLCCGVIATSNDVMEQNYAYTLSRSFDDLRSAE 216
Query: 226 IIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSL 285
+G A+R ++ L KK+ T + PVLF A +A L + A I G++++RKSTFL++ L
Sbjct: 217 WVGQECAQRALNHLNPKKLKTMESPVLFSAEVATSLFHHLASAIHGDNVFRKSTFLLNDL 276
Query: 286 GKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMK 345
KKIF S I I E PH+L GS+ FD+EG++T R +V+NGI+ + L++YSA+K+G+K
Sbjct: 277 KKKIFPSWISIKERPHVLKGLGSAPFDSEGIQTLNRTIVENGILNSWILNSYSARKMGLK 336
Query: 346 TTGNSGGAHHLIIISNKTKSSDNLK--EMLKKMNTGLLVTELMGDGINYITGDYSKGAFG 403
TG++ G ++ I S NL E++K M GL+VT +MG GIN TGDYS+G G
Sbjct: 337 NTGHADGIYNWYI------SYQNLSFMELIKNMQRGLVVTNIMGQGINITTGDYSRGVAG 390
Query: 404 YWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+W+ENG IQY V EI I+G L++MF I AIG D+ TRN GS+LI +M IAG
Sbjct: 391 FWVENGDIQYPVNEIAIAGNLKDMFYNIDAIGHDIETRNHIHCGSVLISSMKIAG 445
>gi|21672374|ref|NP_660441.1| hypothetical protein BUsg082 [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25090917|sp|Q8KA30.1|PMBA_BUCAP RecName: Full=Protein PmbA homolog
gi|21622979|gb|AAM67652.1| PmbA [Buchnera aphidicola str. Sg (Schizaphis graminum)]
Length = 447
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 171/438 (39%), Positives = 258/438 (58%), Gaps = 15/438 (3%)
Query: 21 LAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMF 80
LAQ+ +N + ++ + G SV +R ++ +E NND + V +Y K
Sbjct: 24 LAQEKVNCSIEVCVKKTI-------GISVNIRNSIVENVEFNNDSILFVTVY----NKFS 72
Query: 81 YGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSID 140
G SS+ DF + + A +I++ T+SD F+GLPD L D L+ P +I
Sbjct: 73 KGVSSSKDFSTNGIKKMLEIAIDISKHTSSDFFSGLPDAKFLCFKAQDLDLFYPSEFNIK 132
Query: 141 DAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIA 200
+A A E EAF F+ I+N+E + + + + ANS G + Y +++ IA
Sbjct: 133 NAINFASESEREAFKFDKRIINSEGSFFSNHITIKVFANSLGMLEQYKSTRYSNYNCMIA 192
Query: 201 IKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFE 260
MQRD YS++ L++P+++G A ISRL +KKI+T KCPV+F +
Sbjct: 193 KDNSTMQRDFSYSTSRKLDDLEKPDVLGQKTATNAISRLGSKKINTIKCPVIFSKETSSI 252
Query: 261 LLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQK 320
+ ISG+++YRKSTFL+ L K+IF + I E+PHI GS FD+EGV T
Sbjct: 253 FFSHLIPAISGDNIYRKSTFLLYDLKKRIFPEWLNIEENPHIKKGLGSKPFDSEGVSTTI 312
Query: 321 RLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGL 380
R ++KNGI++ + L+TY+A+KLG+ TTG+SGG + ++SNK S KE+LK M TGL
Sbjct: 313 RSIIKNGILETWLLNTYNARKLGLTTTGHSGGISNW-LVSNKNIS---FKELLKMMKTGL 368
Query: 381 LVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLT 440
L+TELMG G++ ++G+YS+GA G+WIENGKI+Y V EITISG L+ M+ I++I +DV
Sbjct: 369 LITELMGQGVDIVSGNYSRGAVGFWIENGKIKYPVNEITISGNLKKMWNSILSISNDVNM 428
Query: 441 RNSNTSGSILIENMIIAG 458
++ GS L+ + I+G
Sbjct: 429 YSNIQCGSTLLSEIQISG 446
>gi|71892080|ref|YP_277810.1| hypothetical protein BPEN_306 [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|71796186|gb|AAZ40937.1| PmbA [Candidatus Blochmannia pennsylvanicus str. BPEN]
Length = 446
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 163/449 (36%), Positives = 258/449 (57%), Gaps = 13/449 (2%)
Query: 12 IYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVII 71
I ++ + + LN A ++ ++ + G +V R GK++ +E NN +++ I
Sbjct: 8 IQQRNFLENIVHQTLNLAHTY-SNEVAVSVVKTTGITVSTRYGKLENVEFNNRSILDITI 66
Query: 72 YIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKL 131
+ Q K G++ ++D KK++ T+ AA +IA +T+ D +AG+ D+ L N ++ +L
Sbjct: 67 FRQQRK----GSALSNDLNKKAINRTVAAAADIASYTSPDPYAGIADKELLAFNSMNLEL 122
Query: 132 YTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSK 191
+ P L +A E A ++ I+ E ++ + + NSHG + Y S+
Sbjct: 123 FHPISLDTKLGVTLASTAEETALKYDKRIIYTEGGRFSSYFTTKVFGNSHGMLQSYTSSR 182
Query: 192 HIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPV 251
H + IA M+++ Y+ + L E +G A+R ++ L KK+ T + PV
Sbjct: 183 HSLCCGVIAASNDIMEQNYAYTLSRSFDDLRSAEWVGQECAQRALNHLNPKKLKTMESPV 242
Query: 252 LFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSF 311
LF A +A L + A I G++++RKSTFL++ L KKIF S I I E PH+L GS+ F
Sbjct: 243 LFSAEVATSLFHHLASAIHGDNVFRKSTFLLNDLKKKIFPSWISIKERPHVLKGLGSAPF 302
Query: 312 DNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK- 370
D+EG++T R +V+NGI+ + L++YSA+K+G+K TG++ G ++ I S NL
Sbjct: 303 DSEGIQTLNRTIVENGILNSWILNSYSARKMGIKNTGHADGIYNWYI------SYQNLSF 356
Query: 371 -EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFK 429
E++K M GL+VT +MG GIN TGDYS+G G+W+ENG IQY V EI I+G L++MF
Sbjct: 357 MELIKNMQRGLVVTNIMGQGINITTGDYSRGVAGFWVENGDIQYPVNEIAIAGNLKDMFY 416
Query: 430 QIVAIGSDVLTRNSNTSGSILIENMIIAG 458
I AIG D+ TRN GS+LI +M IAG
Sbjct: 417 NIDAIGHDIETRNHIHCGSVLISSMKIAG 445
>gi|330819375|ref|YP_004348237.1| Peptidase U62, modulator of DNA gyrase [Burkholderia gladioli BSR3]
gi|327371370|gb|AEA62725.1| Peptidase U62, modulator of DNA gyrase [Burkholderia gladioli BSR3]
Length = 452
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/443 (34%), Positives = 241/443 (54%), Gaps = 4/443 (0%)
Query: 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQD 75
+E + A+ ++ +A+ GA + +E V V G + M V ++ +D
Sbjct: 13 AELESSAERVIEFARLAGAEGTRVEMEAAESRIVTVTNGVQTDRGFSGTLEMTVTVF-RD 71
Query: 76 GKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW 135
GK+ F + +SD + L + AA + T D AG D + L D L+ P
Sbjct: 72 GKRAF---AKSSDLSDEGLKKIVRAAIDSTAATEPDPAAGFADPSELARAFPDLDLHHPL 128
Query: 136 FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIIS 195
++D+ A R E+ A + I ++ V T LLA S GF++ P+S H I+
Sbjct: 129 DWTLDEIGAYAQRVEDAALAHDPSIKASKGATVRTVSGMSLLATSMGFVATAPWSVHSIA 188
Query: 196 ISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
+P+A E Q W ++ L PE +G AA+R L A ++ T++CPVLFE
Sbjct: 189 CAPVAFGAGEKQIGVWSHASRAFDDLATPEEVGTLAARRATEALGATQVPTQQCPVLFEP 248
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
A LL+ SG +LYR +FL D + +F +H+++ EDP + S FD +G
Sbjct: 249 SAALGLLSELVSAASGEALYRSGSFLKDGIDSSLFPAHVELAEDPFVERGMASRCFDGDG 308
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKK 375
+ +R VV+ G ++G+FL Y+A++L + TGN G H+L++ S +T+ D+ M+ K
Sbjct: 309 IPGWRRKVVEEGRLRGFFLGLYAARRLNLPPTGNGHGPHNLVLSSTRTRPGDDFAAMVGK 368
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
++ GLLVT+++G G+N +TGD+S+GA G+W+ENG+I++ V ITI+ L+ MF + AIG
Sbjct: 369 LHRGLLVTDMVGGGVNRLTGDFSRGAKGFWVENGEIRFPVGGITIASNLRRMFGGLQAIG 428
Query: 436 SDVLTRNSNTSGSILIENMIIAG 458
SD +TR +SGS LI+ M I G
Sbjct: 429 SDAMTRGWASSGSWLIDAMRIGG 451
>gi|15616711|ref|NP_239923.1| PmbA protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
gi|11386966|sp|P57191.1|PMBA_BUCAI RecName: Full=Protein PmbA homolog
gi|25305235|pir||A84940 pmbA protein [imported] - Buchnera sp. (strain APS)
gi|10038774|dbj|BAB12809.1| pmbA protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
Length = 446
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 154/397 (38%), Positives = 247/397 (62%), Gaps = 8/397 (2%)
Query: 62 NNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENT 121
N+D + + +Y K G+ S+ DF K++ + ++ A NI+++++SD F+GLPD
Sbjct: 57 NSDGGLFITVY----NKFSKGSVSSKDFSIKNIKNMLDIAINISKYSSSDFFSGLPDIKF 112
Query: 122 LEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSH 181
L + ++ L+ PW +I++A ++ E AF + IVN+E + + + + + NS
Sbjct: 113 LCFHSMELDLFHPWEFNIENAIKMSILSEKSAFESDKRIVNSEGSFLNSHTTINVFGNSL 172
Query: 182 GFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKA 241
G + Y +++ IA MQRD YS + L +PEI+G AKR ISRL +
Sbjct: 173 GVLEKYKSTRYSNYTCMIAKDKNSMQRDFDYSLSRRIDDLIKPEILGQKTAKRAISRLGS 232
Query: 242 KKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPH 301
+KI T + P++F + ++ + A ISG+++Y+KSTFL++ L KIF + I E+PH
Sbjct: 233 RKIQTMRSPIIFSSEISHMFFSHLASAISGDNVYQKSTFLINDLKMKIFPDWLDIEENPH 292
Query: 302 ILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISN 361
+ GS FDNEGV T+ + ++K GI+Q + L+ Y+A+KL + +TGN GG H+ ++SN
Sbjct: 293 LKRGLGSKPFDNEGVATEIKYIIKAGILQTWLLNCYNARKLKLDSTGNCGGIHNW-LVSN 351
Query: 362 KTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITIS 421
+ S +E+LKKM+ G+LVTELMG G++ I G+YS+GA G+W+E GKI Y + EITIS
Sbjct: 352 QNIS---FEELLKKMDQGILVTELMGQGVDIINGNYSRGAVGFWVEKGKISYPINEITIS 408
Query: 422 GKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
G L+NM+ IV+I SDV RN+ GS+L+ + ++G
Sbjct: 409 GNLRNMWNNIVSISSDVDRRNNIQCGSVLLSEIQVSG 445
>gi|254429128|ref|ZP_05042835.1| TldD/PmbA family [Alcanivorax sp. DG881]
gi|196195297|gb|EDX90256.1| TldD/PmbA family [Alcanivorax sp. DG881]
Length = 451
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/435 (36%), Positives = 247/435 (56%), Gaps = 9/435 (2%)
Query: 25 MLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNS 84
++ AK+ GA + + + G+SV VR+G+++ +E + D+ ++V +Y K G++
Sbjct: 26 LIEEAKRQGADAAEVGVSLSQGYSVNVRQGEVETVEFHRDRGVSVTVY----KGQRKGHA 81
Query: 85 STSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKL 144
S+SD + SL T+ AA IA +T D +AGL L D LY PW + A
Sbjct: 82 SSSDDNRDSLRATLAAATAIAGYTEEDRYAGLAPAADLAREVTDLDLYHPWAMDTQSAIE 141
Query: 145 IAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK 204
A RCE A + ++ IVN+E V + S + A S GF+ GY + H S +A
Sbjct: 142 QALRCETVARD-DARIVNSEGASVNSGASLRVYATSEGFLHGYRGTHHSRVCSVVAEDEA 200
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
MQRD WY +L E +G A +R ++RL A+ T + PV+F +A LL
Sbjct: 201 GMQRDYWYDGGRVGDRLASAEAVGEQARERALARLGAEVPETGELPVIFAPEVASGLLGH 260
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
ISG +LYR+S+FL D LGK + + Q+ E+PH+ S+ FD +G+ T+ + V
Sbjct: 261 LVSAISGGALYRRSSFLQDCLGKAVLPAGFQLTENPHLAAGNASAPFDGDGLPTRAQAFV 320
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
++G+++ Y L Y++++L M TGN GG ++ I T + D+L E++ K+ G+L+TE
Sbjct: 321 EDGVLKQYALGLYASRRLEMAPTGNGGGVRNVRI----TDTGDSLAELMAKVPKGILITE 376
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
+MG GIN +TGDYS+GA G+W ENG IQ +++E TI+G L M I G+DV R +
Sbjct: 377 VMGQGINLVTGDYSRGASGFWFENGVIQGALQEFTIAGHLGEMLLGIQGSGTDVDYRGNI 436
Query: 445 TSGSILIENMIIAGK 459
GS+L+ + IAG+
Sbjct: 437 ACGSLLLSPIKIAGR 451
>gi|347755511|ref|YP_004863075.1| microcin-processing peptidase 1 [Candidatus Chloracidobacterium
thermophilum B]
gi|347588029|gb|AEP12559.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS
family U62 [Candidatus Chloracidobacterium thermophilum
B]
Length = 459
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/456 (33%), Positives = 257/456 (56%), Gaps = 20/456 (4%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+S LA ++ A+++GA+ + + F E FS VR G+I+ +++ + + + + +
Sbjct: 11 QSTAPDLAISVIERARRLGATAAEVIFRESIEFSASVRLGEIETVKEAGSRGLGLRVLL- 69
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
DG++ + STSDF +L + + A +AR T+ D AGLPD L D LY P
Sbjct: 70 DGRQ---ASVSTSDFSPAALDELVETALTLARATSVDETAGLPDPADLATEIPDLDLYDP 126
Query: 135 WFLSIDDAKLI--AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKH 192
L++ + I A E A ++ IVN E GV + H +LANS GF+ Y +
Sbjct: 127 AVLALSAEEKIRLALTAEQAAQAYDPRIVNFEGGGVDSSAGHTVLANSLGFVGEYRSTSL 186
Query: 193 IISISPIAIKGK-EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPV 251
++ P+A +QRD WY + L+ P +G AA+RTI +L A+++ T+ CPV
Sbjct: 187 SLATVPVARDADGRLQRDYWYDARRRLASLEDPASVGRRAAERTIRKLGARRVPTQTCPV 246
Query: 252 LFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSF 311
+F +A L+ +SG++++RK++FLV LG+++ S+ + II+D + GS F
Sbjct: 247 VFAPEVAASLIGHVFGAVSGDAIFRKASFLVGKLGEQVASALVTIIDDGRMPNGLGSRPF 306
Query: 312 DNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSG---------GAHHLIIISNK 362
D EGV T++ V++ G ++ Y +TY+A+KLG +TTGN+ G +++ ++
Sbjct: 307 DGEGVPTRRTTVIREGRLESYLHNTYTARKLGERTTGNAARGLTGAPSVGVNNMYLVPGP 366
Query: 363 TKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISG 422
+ ++ ++ G VTEL+G G+N +TGDYS+GA G WIENG++ + VEE+TI+G
Sbjct: 367 HPP----EAIIASVHHGFYVTELIGFGVNGVTGDYSRGAAGRWIENGELTFPVEEVTIAG 422
Query: 423 KLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
L M KQI IG+D+ R + ++ I M I+G
Sbjct: 423 NLLTMLKQIEMIGNDLDFRGRMAAPTLKIAEMTISG 458
>gi|213621078|ref|ZP_03373861.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Typhi
str. E98-2068]
Length = 330
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 141/332 (42%), Positives = 210/332 (63%), Gaps = 4/332 (1%)
Query: 128 DFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
D L+ P ++ D+A +A R E + + I N E + + NSHG + GY
Sbjct: 3 DLDLFHPAEVTPDEAIELAARAEQASLKADKRITNTEGGSFNSHYGIKVFGNSHGMLQGY 62
Query: 188 PFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTR 247
++H +S IA + +M+RD Y+ L PE +G A+RT+SRL +K+ST
Sbjct: 63 CSTRHSLSSCVIAEENGDMERDYAYTIGRAMADLQAPEWVGAECARRTLSRLSPRKLSTM 122
Query: 248 KCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFG 307
K PV+F +A L I+G ++YRKSTFL+DSLGK+I + I E PH+L
Sbjct: 123 KAPVIFANEVATGLFGHLVGAIAGGAVYRKSTFLLDSLGKQILPEWLTIEEHPHLLKGLA 182
Query: 308 SSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSD 367
SS FD+EGV+T++R +VK+G++ + L+ YSA+KLG+K+TG++GG H+ I
Sbjct: 183 SSPFDSEGVRTERRDIVKDGVLTQWLLTNYSARKLGLKSTGHAGGIHNWRIAGQGL---- 238
Query: 368 NLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNM 427
N +++LK+M TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L+ M
Sbjct: 239 NFEQLLKEMGTGLVVTELMGQGVSGITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKEM 298
Query: 428 FKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++ IV +G D+ TR++ GS+L+ M IAG+
Sbjct: 299 WRNIVTVGDDIETRSNIQCGSVLLPEMKIAGQ 330
>gi|238024469|ref|YP_002908701.1| C69 family peptidase [Burkholderia glumae BGR1]
gi|237879134|gb|ACR31466.1| Peptidase U62, modulator of DNA gyrase [Burkholderia glumae BGR1]
Length = 452
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 158/452 (34%), Positives = 248/452 (54%), Gaps = 4/452 (0%)
Query: 7 NRSKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66
+R ++ +E + A+ ++ A++ GA + +E +V V G +
Sbjct: 4 SRMQWQELAAELETSAERVIELARRAGAQGARVEIEAAESSAVTVTNGVSTERSFCGTRE 63
Query: 67 MNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNP 126
M V + ++DGK+ + +SD + L + AA T +D AGL D L
Sbjct: 64 MTVTV-LRDGKRAL---AKSSDLSDEGLKQAVLAAIEGTAATEADPAAGLADPGLLAREF 119
Query: 127 LDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSG 186
D LY P S+D+ A R E+ A + I ++ V T LLA S GF++
Sbjct: 120 PDLDLYHPLDWSLDELGAHAQRAEDAARAHDPSISTSKGVTVRTASGTSLLATSAGFLAT 179
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
P+S H I+ +P+A++ E Q W + L PE +G AA+R + L A++++T
Sbjct: 180 APWSVHSIACAPVALRAGERQIGFWGDARRAFDDLAPPEAVGAAAARRAVGALGARQVAT 239
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
++CPVLFE A LL SG++LYR +FL + + +F SH+Q+ E+P +
Sbjct: 240 QQCPVLFEPSAALGLLGDLVSAASGDALYRSGSFLRNGIDAPLFPSHVQLREEPFLKRGM 299
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSS 366
S FD +G+ Q R VV+ G ++G+FL Y+A++L + TGN G H+L + S T+++
Sbjct: 300 ASRCFDCDGIAGQSRSVVEEGCLRGFFLGLYAARRLNLAPTGNGYGPHNLEMRSTHTQAA 359
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
D+ ML +++ GLLVTE++G G+N TGD S+GA G+W+ENG+IQ+SV ITI+ L
Sbjct: 360 DDFAAMLGRLHRGLLVTEMVGGGVNPSTGDVSRGAKGFWVENGEIQFSVSGITIASNLGR 419
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
MF + AIGSD +TR TSGS LI+ M++ G
Sbjct: 420 MFGGLQAIGSDAITRGWATSGSWLIDAMMVGG 451
>gi|408374445|ref|ZP_11172132.1| pmbA protein [Alcanivorax hongdengensis A-11-3]
gi|407765720|gb|EKF74170.1| pmbA protein [Alcanivorax hongdengensis A-11-3]
Length = 451
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/443 (35%), Positives = 259/443 (58%), Gaps = 9/443 (2%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
+ +Q A +L A++ GA + + + G+SV VR+G+++ +E + D+ +++ ++ G
Sbjct: 18 QAEQTAAWLLEEARRQGADGAEVNVSVSQGYSVNVRQGEVETVEFHRDRGVSLTLF--QG 75
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
++ G++S+SD + SL DT+ AA IAR+T D +AGL L ++ LY PW
Sbjct: 76 RRK--GHASSSDDSRDSLRDTVAAALAIARYTEEDPYAGLASREQLAVDMPALDLYHPWP 133
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
LS +A A CE EA + IVN+E V+T S + A S GF+ GY + H +
Sbjct: 134 LSTGEAIEQALACEAEA-RADKRIVNSEGASVSTSASQRVFATSEGFLHGYRGTHHSRAC 192
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
S +A MQRD +Y + L E +G A +RT++RL A+ T + PV+F
Sbjct: 193 SVVAEDDAGMQRDFYYDAARQADALASAEQVGRIARERTVARLGARIPDTGEWPVIFAPE 252
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
+A LL ISG ++YR+S+FL D+LGK + + + E PH+ S+ FD +G+
Sbjct: 253 VAAGLLGHLVSAISGGAIYRRSSFLQDALGKAVLPAGFTLSEHPHLPRGNASAPFDADGL 312
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKM 376
T ++ V +G++Q + LS Y++++L M TGN GG +L I + S + L++++ ++
Sbjct: 313 PTVEQAFVDDGVLQRFALSLYASRRLKMAPTGNGGGIRNLRI----SDSGETLQQLMSRV 368
Query: 377 NTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGS 436
G+LVTE+MG G+N +TGDYS+GA G+W ENG I+ +++E TI+G L M+ I G+
Sbjct: 369 PKGILVTEVMGQGVNLVTGDYSRGASGFWFENGVIKDALQEFTIAGHLGEMWMGIQGSGT 428
Query: 437 DVLTRNSNTSGSILIENMIIAGK 459
DV R + GS+L+ + IAG+
Sbjct: 429 DVDYRGNIACGSLLLSPLKIAGR 451
>gi|406915353|gb|EKD54444.1| microcin-processing peptidase 1, partial [uncultured bacterium]
Length = 369
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/374 (39%), Positives = 227/374 (60%), Gaps = 8/374 (2%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+A++ L K + + I E GFSV R G ++ +E + +K+ V ++ +
Sbjct: 3 LHDVAKNALKKLKSLNIDAAEISLGETKGFSVTARLGDVETLEHHLEKSFGVTVF----Q 58
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++S+SDF ++S+ TI A IARF++ D +AGL D L N D LY W +
Sbjct: 59 NQCTGSASSSDFSEESIQATIEKACTIARFSSPDQYAGLADPARLAKNYPDCDLYHFWDI 118
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
S DA +A CE +A F+ I+N+E ++T SH + AN+ GF+ Y S+H IS S
Sbjct: 119 SPQDAITLAIECEKKAVGFDKRIINSEGASISTMNSHGVYANTLGFLGEYNASEHGISCS 178
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
+A + +MQRD+ Y+ + K L + I AA++TI+RL A+KI T+ CP++FEA
Sbjct: 179 VVACEDNQMQRDDEYTVARNSKDLQSIDFIAQRAAEKTINRLGARKIKTQTCPIIFEAST 238
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A LL+ + ISG +LYR+S+FL+++LGK IF + + + + PHIL + GS FD EG+
Sbjct: 239 AKSLLHSLVQAISGGNLYRQSSFLLNALGKPIFPAFMNVFQRPHILSAMGSCPFDREGIA 298
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
T + V+ G + Y L +YSA+KLGM++TGN+GG +L+I + + L+++L+KM
Sbjct: 299 TVDQDYVRAGELVSYVLGSYSARKLGMQSTGNAGGIFNLLI----SPTDVTLQQLLQKMQ 354
Query: 378 TGLLVTELMGDGIN 391
GLLVTELMG G+N
Sbjct: 355 RGLLVTELMGQGVN 368
>gi|116620144|ref|YP_822300.1| microcin-processing peptidase 1 [Candidatus Solibacter usitatus
Ellin6076]
gi|116223306|gb|ABJ82015.1| microcin-processing peptidase 1. Unknown type peptidase. MEROPS
family U62 [Candidatus Solibacter usitatus Ellin6076]
Length = 450
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 244/450 (54%), Gaps = 17/450 (3%)
Query: 20 QLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKM 79
+LAQ+++ A+ GAS + EG FS VR +++ +++ + + I I GK
Sbjct: 8 ELAQNIIRQAQAAGASDAECTIAEGEEFSANVRMREVENLKEAGSRGAGLRILI--GKHT 65
Query: 80 FYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSI 139
G S TSD + + + +A + T D AGLPD P D +Y+P +
Sbjct: 66 --GASYTSDLSSEGIAHMVKSAIELGDITTEDPHAGLPDPEDFGSVPGDLGMYSPDIAQL 123
Query: 140 DDAKLI--AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
D A I A R E A + + I N+E + ANS GF Y S +S S
Sbjct: 124 DTAVKIDMAKRAEEAALSSDPRISNSEGASFDNYVGRHVFANSRGFAGEYRSSYCSLSTS 183
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
P+A G M+RD WY+ L+ PE +G AA+R + RL A K+ T+K PV+FE
Sbjct: 184 PVARDGDSMERDYWYTMARTFPGLEAPEHVGRMAAQRALRRLNAVKVETQKVPVVFEPRT 243
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
A LL+ + G S+YR +FL + LG+K+ + +I+D I G FG+S FD+EGV
Sbjct: 244 ARSLLDNIFEAVHGMSIYRHESFLANKLGQKVACDGLTVIDDGTIPGLFGTSPFDDEGVA 303
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKT--------TGNSGGAHHLIIISNKTKSSDNL 369
+++ +V++ G+++ Y L++Y+A+KLGMKT TGN+G H I ++ +
Sbjct: 304 SRRTVVIERGVLKNYLLNSYAARKLGMKTTGNASRGLTGNAGIGHGNFFIEKGVQTPE-- 361
Query: 370 KEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFK 429
+++ + G VTELMG G+N +TGDYS+GA G WI NG++ ++V E+TI+G L M
Sbjct: 362 -QIIAGIPNGFYVTELMGFGVNIVTGDYSRGAAGLWIRNGELAFAVSEVTIAGNLSEMLL 420
Query: 430 QIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
I AIGSD+ R S + +I + M + GK
Sbjct: 421 GIEAIGSDLDFRGSVAAPTIKMGEMTVGGK 450
>gi|167586570|ref|ZP_02378958.1| peptidase U62 modulator of DNA gyrase [Burkholderia ubonensis Bu]
Length = 221
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 131/221 (59%), Positives = 178/221 (80%)
Query: 239 LKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIE 298
+ A+++ TRK PVLFEAPLA LL F + +SG +LYRK++FLVDSLGK +F+ H+QI+E
Sbjct: 1 MGARRLDTRKVPVLFEAPLAAGLLGAFVQAVSGGALYRKTSFLVDSLGKPVFAPHVQIVE 60
Query: 299 DPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLII 358
DPH+ + GS+ FD EGV+T+ R VVK+G+++GYFLSTYSA+KLG +TTGN+GG+H+L +
Sbjct: 61 DPHVPRAMGSAPFDEEGVRTRARSVVKDGVVEGYFLSTYSARKLGTQTTGNAGGSHNLAL 120
Query: 359 ISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEI 418
S+ T+S D+ MLKK+ TGLL+TELMG G+NY+TGDYS+GA G+W+ENG IQY VEEI
Sbjct: 121 RSSNTQSGDDFDAMLKKLGTGLLLTELMGQGVNYVTGDYSRGAAGFWVENGVIQYPVEEI 180
Query: 419 TISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
T++ LQ MF+ IVAIG+D + R + +GS+LIE M IAG+
Sbjct: 181 TVASTLQEMFRHIVAIGADSIVRGTKETGSVLIEQMTIAGQ 221
>gi|307728045|ref|YP_003911258.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. CCGE1003]
gi|307588570|gb|ADN61967.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. CCGE1003]
Length = 452
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 150/426 (35%), Positives = 235/426 (55%), Gaps = 4/426 (0%)
Query: 33 GASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKK 92
GA + +E + G SV VR G + + + +Y +DG++ ++STSD +
Sbjct: 30 GAEDAKVEASRTEGRSVTVRGGVTAERKLQLASEVTITVY-RDGRRA---STSTSDVSRS 85
Query: 93 SLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENE 152
L I AA IA A D AG DE L + D LY P +++D A+R ++
Sbjct: 86 GLDAAIVAALQIAAVAARDEAAGPADEMQLARDYPDLDLYHPADIALDHMVESAHRADSA 145
Query: 153 AFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWY 212
A+ + I V T +LA S GFM P+S H IS S +A +E Q W
Sbjct: 146 AYAVDKAIAATNGACVHTTSGLSILATSRGFMGRTPWSMHAISASAVAAGERERQIGFWS 205
Query: 213 SSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGN 272
+ + + L P+ +G AA R + L ++ ++T+ CPVLFE A LL F SG+
Sbjct: 206 DAARNHEDLASPDEVGKMAASRALGALNSRSVATQTCPVLFEPMAAMSLLREFVGAASGD 265
Query: 273 SLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGY 332
+LYR +FL D +G +F H+ + EDP ++ S FD +G+ +R V+ G+++GY
Sbjct: 266 ALYRSGSFLTDRIGSALFPEHVSVFEDPFVMRGMSSRCFDGDGIPAAQRTVIDRGVLKGY 325
Query: 333 FLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINY 392
FL Y+A++L M TGN G H+L + S ++ S+ L+ ML +++ GL VT+L+G G+N
Sbjct: 326 FLGLYAARRLKMSPTGNGYGPHNLEVRSGRSDSTGGLRSMLSRLDRGLFVTDLVGGGVNR 385
Query: 393 ITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIE 452
+ GD+S+ A G+W+E G+IQ++V +T++ L MF ++AIG+D L R T+GS LI+
Sbjct: 386 LNGDFSRAARGFWVEGGEIQFAVSGVTLASNLLAMFGGLLAIGADRLARGGITTGSWLID 445
Query: 453 NMIIAG 458
M + G
Sbjct: 446 EMKLGG 451
>gi|260072695|gb|ACX30592.1| Zn-dependent protease [uncultured SUP05 cluster bacterium]
gi|269468469|gb|EEZ80130.1| Zn-dependent protease [uncultured SUP05 cluster bacterium]
Length = 439
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 156/442 (35%), Positives = 260/442 (58%), Gaps = 8/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+Q AQ ++ K+ S I +G S VR G+++ ++ + DK+ ++ +Y+ K
Sbjct: 5 LEQTAQLAIDLLKQYNVSDYEISLGSSSGVSTSVRLGEVETLQYHLDKSFDINVYMGQKK 64
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G++S+ D K SL TI +A IA++T D F GL + + + D LY PW L
Sbjct: 65 ----GHASSVDLSKDSLNKTIESACLIAKYTQDDPFNGLAPKELMAFDAPDLDLYHPWDL 120
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ +A CE A + I N+E + V++ + L ANS+G ++ ++H + S
Sbjct: 121 DAQHSIDLAKECEAIALEQDE-IDNSEGSEVSSFEGEGLYANSNGLIATQSSTRHSLHCS 179
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G++ Q Y++ D L+ P+ +G AA +L A+ ++++KCPV+F + L
Sbjct: 180 LIAKRGEDKQTAYEYTTALDANDLNPPKTVGIKAASLAQQKLGAQSLTSQKCPVIFTSRL 239
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
+ L + +SG+ Y+KSTFL+DS+ + I +I ++E P + + G+ +FD +GV
Sbjct: 240 SGGLFSQLLGALSGSRQYKKSTFLLDSIDQIILPKNISLLERPFVKKTLGAKAFDTDGVL 299
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
+++ + +G ++ Y + YSA +LG+KTT N+GG +++++ +N L EM++ M
Sbjct: 300 KREQYFIHDGRVKSYVMGQYSANQLGLKTTANAGGVNNVMVDAN---FEGGLDEMIQDMG 356
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GL+VTELMG GIN TGDYS+GA G+W+ENGKIQY V +TI+G L++M IV +G+D
Sbjct: 357 KGLVVTELMGQGINGTTGDYSRGALGFWVENGKIQYPVSGLTIAGNLKDMLLGIVHVGTD 416
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
V R++ GS+LI M IAG+
Sbjct: 417 VDQRSNLKVGSVLINQMTIAGE 438
>gi|323143675|ref|ZP_08078348.1| putative protein PmbA [Succinatimonas hippei YIT 12066]
gi|322416555|gb|EFY07216.1| putative protein PmbA [Succinatimonas hippei YIT 12066]
Length = 452
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/447 (34%), Positives = 255/447 (57%), Gaps = 11/447 (2%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+S + +AQ + YAK +G + G SV RK ++ IE N ++ +++ ++
Sbjct: 13 ESRIKDIAQKAVEYAKSLGVDEAEATIGLQKGLSVSTRKADVENIEFNKNRGLDITVF-- 70
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
K GN+ST+DF ++ + AA N+A FT +D AG+ D+ L D KL P
Sbjct: 71 --KNKKRGNASTTDFSADAIKSCVEAAVNLASFTDADPCAGIADKEDLCTEEKDLKLVYP 128
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIV---NNENTGVTTQQSHFLLANSHGFMSGYPFSK 191
+D K++A E E I +++ G T +ANSHGF+ +
Sbjct: 129 LTEDVD--KVLALALETEKIVLKDKIKGIKDSDGAGCETSLVIKAIANSHGFVGTKARTF 186
Query: 192 HIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPV 251
+ + ++ + G +MQR + YS++ D KL P+I+ A RT+ +L AKKI+T V
Sbjct: 187 NYLGLTLLGDDGIKMQRGSGYSTSLDFAKLKDPQIVAKEAVDRTLEKLNAKKIATGIYNV 246
Query: 252 LFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSF 311
+F L ISG ++YRK+TFL +SL + + I + EDP I G S +F
Sbjct: 247 IFSKGAMMSLWGHLLSAISGGAVYRKTTFLHESLNEAVLPEFITLHEDPFITGGLASGNF 306
Query: 312 DNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKE 371
D EGV+ + +V G+++ + LS+Y+A+KL +KT G+SG ++L ++S+K S L
Sbjct: 307 DGEGVQARVGDIVAKGVLKEFLLSSYTARKLNLKTNGHSGSVYNLCVVSDKDPVS--LDA 364
Query: 372 MLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQI 431
M+K +G+++T+LMG G++ +TG+YS+GA G++ ENG+ +++VEEIT++G L++MFK+I
Sbjct: 365 MMKDAGSGIVITDLMGQGVDLLTGNYSRGAAGFYFENGERKHAVEEITVAGNLKDMFKKI 424
Query: 432 VAIGSDVLTRNSNTSGSILIENMIIAG 458
+G+D R SGS+LI +M I+G
Sbjct: 425 ALVGNDYDDRFKIKSGSLLIPDMTISG 451
>gi|383785194|ref|YP_005469764.1| peptidase U62, modulator of DNA gyrase [Leptospirillum ferrooxidans
C2-3]
gi|383084107|dbj|BAM07634.1| putative peptidase U62, modulator of DNA gyrase [Leptospirillum
ferrooxidans C2-3]
Length = 458
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 161/452 (35%), Positives = 252/452 (55%), Gaps = 31/452 (6%)
Query: 25 MLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNS 84
+L+ AKK+GA+ + + + +S+ VRKG ++ + ++ + M + ++F G S
Sbjct: 19 VLSEAKKLGATDADALYVTSDDYSISVRKGDVEKVHRSMSRGMGI--------RVFRGQS 70
Query: 85 ----STSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSID 140
STSD + SL D + A +A TA D +GLPD LE F+ P L D
Sbjct: 71 QAIVSTSDLNRDSLSDLVREAVRLAGETAPDAHSGLPDPEDLE-----FRRPFPDLLLED 125
Query: 141 D------AKL---IAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSK 191
D AKL +A CE A +++S I ++E + + + N+ GF+ G +
Sbjct: 126 DGRDAPSAKLRLDLALSCEKAALSYDSRISSSEGAEFQSSRMTRQMGNTRGFLGGTSRTN 185
Query: 192 HIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPV 251
+ +S++ IA +G M+RD WY + LD P IG +++R ISRL K+ T +
Sbjct: 186 YALSVTSIAKEGDSMERDYWYDQRPFFRDLDSPGAIGAESSRRAISRLNPKRPKTGNARI 245
Query: 252 LFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSF 311
LF+ A L+ ISG++LYR +T+L G K+ SS + + EDP + G FGS F
Sbjct: 246 LFDPENARSLIGHLLSAISGHALYRDATYLKGREGSKVASSLLTLTEDPFLPGGFGSRPF 305
Query: 312 DNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGN---SGGAHHLIIISN--KTKSS 366
D EGV+ K+ ++ GI+ G+ +YSA+K G KTTGN S G ++ SN T +
Sbjct: 306 DGEGVRVAKKEILSGGILNGFLFDSYSARKTGHKTTGNAVRSLGDAPVVGTSNVIVTPGT 365
Query: 367 DNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQN 426
++ +LK+M G++VTEL+G G+N +TGDYS+GAFGY + G+I + E TI+G L
Sbjct: 366 EDRSGLLKQMGDGIMVTELIGFGVNTVTGDYSRGAFGYEVRGGEILGPLSEFTIAGTLDA 425
Query: 427 MFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+F I+ IGSDV +R+S SIL++ + ++G
Sbjct: 426 LFSGIMGIGSDVSSRSSIVCPSILVDGLRVSG 457
>gi|410479673|ref|YP_006767310.1| Zn-dependent protease [Leptospirillum ferriphilum ML-04]
gi|406774925|gb|AFS54350.1| putative Zn-dependent protease [Leptospirillum ferriphilum ML-04]
Length = 452
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 166/462 (35%), Positives = 259/462 (56%), Gaps = 36/462 (7%)
Query: 19 QQLAQDMLNY----AKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
++ A D+L++ A+ +GA+ + + + V VRKG+++ I++ + M
Sbjct: 3 EREALDLLSFVVDRARSLGATSADALLIDSDDNVVGVRKGEVEKIQRTRSRGM------- 55
Query: 75 DGKKMFYGNS----STSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD-- 128
G ++F G+S STSD + SL + A +A T D F+GLP + P
Sbjct: 56 -GLRIFRGHSQAIVSTSDLDRSSLESLVRGAVAMAEETQPDPFSGLPGTGAGRVLPSPSL 114
Query: 129 --FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHF--LLANSHGFM 184
F+ P +S ++ +A E AF + I N+E G Q +H L N+ GF
Sbjct: 115 EIFEDPAP-DISQEERIRLALETEKAAFAEDPRIRNSE--GAEFQSTHLRSYLVNTDGFS 171
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
G S + +S S IA G M+RD WY + +L PE +G +A +R ISRL ++
Sbjct: 172 GGSARSLYGLSCSVIARDGDSMERDYWYEQSHFYHRLPHPEEVGRHAGRRAISRLHPRRP 231
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
T CPVLF+A +A L++ +SG SLYR +T+L D ++ S+ + I EDP + G
Sbjct: 232 KTTTCPVLFDAEVARSLVSHLIGALSGYSLYRNATYLKDRENSRVASTGVTIREDPLLPG 291
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNS----GGAHHL---- 356
FGS FD EGV ++ +++V++G+++ Y YS +K G TTGN+ G A H+
Sbjct: 292 GFGSRPFDGEGVVSKPKVIVEHGLLKTYLFDAYSGRKNGRSTTGNASRSLGDAPHVGVSN 351
Query: 357 IIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVE 416
I++ +S D E+L +M GL VTEL+G G+N +TGDYS+GAFG+W+E+G+IQ+ V
Sbjct: 352 ILVEPGGRSKD---ELLHEMKRGLYVTELIGFGVNAVTGDYSRGAFGFWVEDGEIQFPVS 408
Query: 417 EITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
E+TI+G L +MF+ IV +G+D R+S S SIL+ +M + G
Sbjct: 409 ELTIAGNLDDMFQSIVEVGNDRRIRSSIASPSILLGSMRVGG 450
>gi|424866518|ref|ZP_18290353.1| Putative peptidase U62, modulator of DNA gyrase [Leptospirillum sp.
Group II 'C75']
gi|124515090|gb|EAY56601.1| putative peptidase U62, modulator of DNA gyrase [Leptospirillum
rubarum]
gi|387222820|gb|EIJ77222.1| Putative peptidase U62, modulator of DNA gyrase [Leptospirillum sp.
Group II 'C75']
Length = 452
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 166/462 (35%), Positives = 259/462 (56%), Gaps = 36/462 (7%)
Query: 19 QQLAQDMLNY----AKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
++ A D+L++ A+ +GA+ + + + V VRKG+++ I++ + M
Sbjct: 3 EREALDLLSFVVDRARSLGATSADALLIDSDDNVVGVRKGEVEKIQRTRSRGM------- 55
Query: 75 DGKKMFYGNS----STSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD-- 128
G ++F G+S STSD + SL + A +A T D F+GLP + P
Sbjct: 56 -GLRIFQGHSQAIVSTSDLDRSSLESLVRGAVAMAEETQPDPFSGLPGTGAGRVLPSPSL 114
Query: 129 --FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHF--LLANSHGFM 184
F+ P +S ++ +A E AF + I N+E G Q +H L N+ GF
Sbjct: 115 EIFEDPAP-DISQEERIRLALETEKAAFAEDPRIRNSE--GAEFQSTHLRSYLVNTDGFS 171
Query: 185 SGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKI 244
G S + +S S IA G M+RD WY + +L PE +G +A +R ISRL ++
Sbjct: 172 GGSARSLYGLSCSVIARDGDSMERDYWYEQSHFYHRLPHPEEVGRHAGRRAISRLHPRRP 231
Query: 245 STRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILG 304
T CPVLF+A +A L++ +SG SLYR +T+L D ++ S+ + I EDP + G
Sbjct: 232 KTTTCPVLFDAEVARSLVSHLIGALSGYSLYRNATYLKDRENSRVASTGVTIREDPLLPG 291
Query: 305 SFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNS----GGAHHL---- 356
FGS FD EGV ++ +++V++G+++ Y YS +K G TTGN+ G A H+
Sbjct: 292 GFGSRPFDGEGVVSKPKVIVEHGLLKTYLFDAYSGRKNGRSTTGNASRSLGDAPHVGVSN 351
Query: 357 IIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVE 416
I++ +S D E+L +M GL VTEL+G G+N +TGDYS+GAFG+W+E+G+IQ+ V
Sbjct: 352 ILVEPGGRSKD---ELLHEMKRGLYVTELIGFGVNAVTGDYSRGAFGFWVEDGEIQFPVS 408
Query: 417 EITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
E+TI+G L +MF+ IV +G+D R+S S SIL+ +M + G
Sbjct: 409 ELTIAGNLDDMFQSIVEVGNDRRIRSSIASPSILLGSMRVGG 450
>gi|322436948|ref|YP_004219160.1| peptidase U62 modulator of DNA gyrase [Granulicella tundricola
MP5ACTX9]
gi|321164675|gb|ADW70380.1| peptidase U62 modulator of DNA gyrase [Granulicella tundricola
MP5ACTX9]
Length = 469
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 165/468 (35%), Positives = 272/468 (58%), Gaps = 34/468 (7%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
+ + LAQ +L+ A K GA+ + EG FS VR G+++ ++++ + + + ++
Sbjct: 9 DLRTLAQSVLDRALKAGATDAEAVAYEGEEFSALVRLGQVETLKESGSRAIGLRVF---- 64
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
+ ++S+SD L + A +A+ T+ D F+GLP+ + D LY +
Sbjct: 65 NGLRSASTSSSDLSPDGLAKLVEGAVALAKITSEDPFSGLPEASAFGQIETDQHLY---Y 121
Query: 137 LSIDDAKL-----IAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSK 191
++D IA RCE A F++ I N+ T SH ++ NS GF+ S
Sbjct: 122 EDVNDQPPEERIEIARRCEAAAMAFDTRIQNSGGGDFDTATSHKIMVNSRGFIGETRRSY 181
Query: 192 HIISISPIA-IKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
S +PIA + MQR+ W+SS+ + L+ PE IG AA+RT+ RL A+++ T++ P
Sbjct: 182 CGFSAAPIAHDEHGHMQRNYWFSSSRTTRLLEDPEAIGRKAAERTLRRLGARRVKTQRAP 241
Query: 251 VLFEAPLAFELL-NIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPH-------- 301
V+F +A ++ NIF +G+++YR ++FL D LG++I +I +I+D
Sbjct: 242 VVFSPEIAKSIIGNIF-EAANGDAIYRHASFLDDMLGQQIAGPNINVIDDGTMVHKRIDP 300
Query: 302 ------ILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNS--GGA 353
++G FG+S FD EG+ T++ ++V+NGI++ Y L+TY+A+KLGM +TGN+ G A
Sbjct: 301 LTGDTILIGGFGTSPFDGEGLPTRRTVLVENGILKNYVLNTYTARKLGMASTGNASRGLA 360
Query: 354 HHLIIISNK---TKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGK 410
+ I + + +E++ + +GL VTE MG G+N +TGDYS+GA G WIENG+
Sbjct: 361 GNPGIGAGNFYLEPGTQTPEEIIAGIPSGLYVTETMGFGVNLVTGDYSQGAAGLWIENGE 420
Query: 411 IQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+ Y VEEITI+G L++M+K IVAIG+D+ R + + ++ IE M+IAG
Sbjct: 421 LAYPVEEITIAGNLKDMYKNIVAIGNDLTFRGAAAAPTLHIEGMMIAG 468
>gi|40063290|gb|AAR38108.1| pmbA protein [uncultured marine bacterium 578]
Length = 438
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/442 (34%), Positives = 247/442 (55%), Gaps = 8/442 (1%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+Q Q + K+ S I + G S VR ++ ++ + D + NV +YI K
Sbjct: 4 LEQTTQLAIELIKQQKVSDFEISLGKSCGVSTTVRLSNVETLQYHLDTSFNVSVYIGKNK 63
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
G ++++D K SL + I +A IA++T D F GL + + + LY PW L
Sbjct: 64 ----GQATSADLSKASLKNAIESACLIAKYTQEDPFNGLAPSERMAWDSPNLDLYYPWNL 119
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
+ + IA CE A S I N++ +++ + + ANS+G ++ S+H + S
Sbjct: 120 DANKSIEIAKECEQIALE-QSEINNSDGAELSSFEGESVYANSNGLIANLKSSRHSLYCS 178
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPL 257
IA +G EMQ + YS D L P IIG AA+ +L ++ + +KCP++F +
Sbjct: 179 LIAKRGGEMQTAHEYSVAIDSNDLTAPSIIGLEAARLAQEKLGSRHLGPQKCPIIFTSRQ 238
Query: 258 AFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVK 317
+ + + +SG+ Y+K++FL++SLG ++ I I EDP L + GS +FD +GV
Sbjct: 239 SSGIFSQLLGALSGSRQYKKTSFLLESLGSQVLPESISIYEDPLKLKTLGSRAFDQDGVL 298
Query: 318 TQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMN 377
+K+ VK GI+ Y + YSA ++G+++T N+GG + + SN + E+ K M+
Sbjct: 299 KKKQFFVKEGIVSSYLMGQYSANQMGLESTANAGGVSNCCVNSN---FDGGITELTKSMD 355
Query: 378 TGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSD 437
GL+VT+LMG G+N TGDYS+GA G+W+ENG+I+Y V ITI+G L++M +V+I SD
Sbjct: 356 RGLIVTDLMGHGVNATTGDYSRGASGFWVENGEIKYPVSGITIAGNLKDMLNNVVSIASD 415
Query: 438 VLTRNSNTSGSILIENMIIAGK 459
V R++ GS LI M I+G+
Sbjct: 416 VDFRSNLKVGSTLISEMTISGE 437
>gi|251773059|gb|EES53615.1| peptidase U62, modulator of DNA gyrase [Leptospirillum
ferrodiazotrophum]
Length = 460
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 158/451 (35%), Positives = 249/451 (55%), Gaps = 10/451 (2%)
Query: 14 SKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYI 73
S E ++ + +L A+ GA+ + + G +V VRKG+I+ ++ + + + ++
Sbjct: 13 SLEEGEEAIRFILEAARSAGATSADALYVSGVEETVGVRKGEIEKVQAAQSRGIGIRVFA 72
Query: 74 QDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDE-NTLEMNPLDFKLY 132
G + + +T D L + A +A+ TA D +AGLPD ++P
Sbjct: 73 --GTRQ--SSVATRDLSPDHLRSLVARAVAMAQHTAEDPYAGLPDRILPPAIDPAKLFPE 128
Query: 133 TPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKH 192
S D+ A E A +F+ I N+E + SH + NS GF+ GY +
Sbjct: 129 ESRIPSRDELVERALATEKAALSFDPRITNSEGAECSRSHSHIVFGNSLGFLHGYRKGSY 188
Query: 193 IISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252
+S S IA G +M+RD WY + +K+ E IG AA RT+ RL A++I T PV+
Sbjct: 189 ALSCSVIATSGDQMERDYWYVTGPLWEKISDAEAIGQKAASRTVRRLGARRIKTGTYPVI 248
Query: 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFD 312
F+ A L+ FA +SG++LYR +T+L G + ++ + + EDP + G+ GS FD
Sbjct: 249 FDPETARSLVGHFAGAVSGSALYRNATYLKGREGTPVMNACMTLREDPFLPGAPGSRPFD 308
Query: 313 NEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGN---SGGAHHLIIISN--KTKSSD 367
EG+ T+K+ +V G++Q + TYSA+KLG ++T N S G + ISN +
Sbjct: 309 GEGLPTRKKTLVDEGVLQTFLFDTYSARKLGRQSTANAVRSLGDGPGVGISNLIVDPGTS 368
Query: 368 NLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNM 427
L +++KK GLLVTEL+G G++ +TGDYS+GAFGYW E+G I + V EIT++G L +
Sbjct: 369 TLDDLMKKAGKGLLVTELIGFGVSTVTGDYSRGAFGYWFEDGAILHPVSEITLAGTLDEI 428
Query: 428 FKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+K IV GSD+ R+S S S+L++ + IAG
Sbjct: 429 YKNIVDRGSDLEIRSSINSPSLLVDGLRIAG 459
>gi|422776438|ref|ZP_16830092.1| PmbA protein [Escherichia coli H120]
gi|323945970|gb|EGB42008.1| PmbA protein [Escherichia coli H120]
Length = 343
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 193/282 (68%), Gaps = 4/282 (1%)
Query: 178 ANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTIS 237
NSHG + GY ++H +S IA + +M+RD Y+ L PE +G A+RT+S
Sbjct: 66 GNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGRAMSDLQTPEWVGADCARRTLS 125
Query: 238 RLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQII 297
RL +K+ST K PV+F +A L I+G S+YRKSTFL+DSLGK+I + I
Sbjct: 126 RLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFLLDSLGKQILPDWLTIE 185
Query: 298 EDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLI 357
E PH+L S+ FD+EGV+T++R ++K+GI+ + L++YSA+KLG+K+TG++GG H+
Sbjct: 186 EHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTSYSARKLGLKSTGHAGGIHNWR 245
Query: 358 IISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEE 417
I + ++MLK+M TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V E
Sbjct: 246 IAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGDYSRGAAGFWVENGEIQYPVSE 301
Query: 418 ITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
ITI+G L++M++ IV +G+D+ TR++ GS+L+ M IAG+
Sbjct: 302 ITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKIAGQ 343
>gi|347735598|ref|ZP_08868440.1| pmbA protein [Azospirillum amazonense Y2]
gi|346921159|gb|EGY01977.1| pmbA protein [Azospirillum amazonense Y2]
Length = 467
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/450 (31%), Positives = 248/450 (55%), Gaps = 5/450 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
+ S+++ + + + +GA + +EG G S+ V G+++ ++ ++++ +
Sbjct: 22 LLRSEADLAKAVTYAIEQSVALGAGGAIARVSEGGGISITVANGEVENAVRDGNQSLQIT 81
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++++ G+ G +ST + ++ + A ++AR D AGL D L +
Sbjct: 82 VFLE-GRT---GMASTESLSRDAVDRVVEQAISMARQLEPDEEAGLADREALAWDSPSVP 137
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSL-IVNNENTGVTTQQSHFLLANSHGFMSGYPF 189
L+ P F + + A E ++ V G +Q + F LA S GF
Sbjct: 138 LFAPSFHTAVELTNAAMAIEAAVMATSTADTVRVSEAGAASQDARFALATSQGFCRAGSS 197
Query: 190 SKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKC 249
S IA +G EM++ NW S ++L+ E IG AA+R + L A+ ++TR+
Sbjct: 198 SMQHRWCQTIAQRGDEMKQGNWSSGVRRIEELESAEQIGRLAAERALDMLGAEGLTTRRA 257
Query: 250 PVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSS 309
PVL ++ +A L+ +SG + +++ TFL D++G+ + +SH+ + EDP S+
Sbjct: 258 PVLIDSTVASSLVRDMCGQLSGGAQFQRMTFLPDAMGQVLAASHLSVTEDPFEPFGLASA 317
Query: 310 SFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNL 369
+FD+EGV R ++++G+++G FL T +KLG +TGN+GG +L ++SN T S+D+L
Sbjct: 318 AFDSEGVAGACRDIIRDGVVKGLFLDTRMGRKLGRASTGNAGGMRNLTLVSNLTSSTDDL 377
Query: 370 KEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFK 429
ML+KM TGL +T MG G + TG YS A G+W+ENG++ +V+ T++G LQ MFK
Sbjct: 378 AAMLRKMGTGLWLTRFMGGGSDPATGVYSSAAAGFWVENGQVMQAVQGFTVAGNLQEMFK 437
Query: 430 QIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IVA+G+D+ + +GSIL+ +M IAG+
Sbjct: 438 AIVAVGADIYRDGAIRTGSILLPDMQIAGR 467
>gi|415929325|ref|ZP_11555160.1| PmbA, partial [Herbaspirillum frisingense GSF30]
gi|407759928|gb|EKF69388.1| PmbA, partial [Herbaspirillum frisingense GSF30]
Length = 228
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 118/225 (52%), Positives = 164/225 (72%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
+ F +S+ + +QLAQD+L YA+ GAS ++++ +EG+G SV VRKGKI+ IEQN DK +
Sbjct: 4 TPFTHSQDQLKQLAQDVLRYARDKGASDAAVDISEGSGLSVAVRKGKIETIEQNKDKGIG 63
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
V +++ +G+++ GN+STSDF +++L +T+ AAYNIARFT+ D+ AGLP+ LEM P D
Sbjct: 64 VTVFLGEGRQVRRGNASTSDFSQQALKETVEAAYNIARFTSIDDCAGLPEAEMLEMAPRD 123
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
KL++PW +S ++A +A RCE A + I N+E GV Q SHF+ ANS GFM GYP
Sbjct: 124 LKLFSPWNISTEEAVALAQRCEAAALETDPRISNSEGAGVYVQHSHFIAANSRGFMGGYP 183
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAK 233
FS+H IS++PIA KG MQRD+WYSS DPK L +PE IG YAA+
Sbjct: 184 FSRHTISVAPIAGKGAGMQRDDWYSSKRDPKLLAKPEAIGRYAAE 228
>gi|392375897|ref|YP_003207730.1| hypothetical protein DAMO_2858 [Candidatus Methylomirabilis
oxyfera]
gi|258593590|emb|CBE69931.1| conserved protein of unknown function [Candidatus Methylomirabilis
oxyfera]
Length = 447
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/451 (33%), Positives = 242/451 (53%), Gaps = 19/451 (4%)
Query: 19 QQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKK 78
+Q+ +++L AK+ GA+ + + E + VR G+ + + + ++ G +
Sbjct: 4 RQIVEEVLQEAKRKGATEADLVLTENELVATQVRLGETETLRSAKE--------VRLGLR 55
Query: 79 MFY----GNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
+F+ SSTSD +SL + +A+ A D +GLP N D LY
Sbjct: 56 LFFDKRSATSSTSDLSTESLARLVEDTAVLAKAIARDECSGLPPTEECAKNIPDLNLYDS 115
Query: 135 --WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKH 192
L++ D A E A + +S I N+E + + +S GF+ Y S
Sbjct: 116 DGETLTVKDQLDRAKAAETAALSSDSRITNSEGAEFASNLYRIIYGSSQGFLGEYRGSTF 175
Query: 193 IISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252
+++SPIA MQRD+WYS L+ PE +G AA+RT+ RL A+KI T++ PV+
Sbjct: 176 SLAVSPIASSEDGMQRDHWYSRARHLGALESPEAVGKRAAERTLRRLGARKIKTQEVPVV 235
Query: 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFD 312
F+ A LL I + G +LYR ++FLV LG++I + + + +D + G GS FD
Sbjct: 236 FDPETATNLLRIICGALCGPALYRGASFLVGKLGERIAAETVSVYDDGTLPGYLGSKPFD 295
Query: 313 NEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNS---GGAHHLIIISN--KTKSSD 367
EG+ T++ +V+NG+++ Y L +YSA+KLGMK TGN+ G +N
Sbjct: 296 GEGLPTRRNTIVENGVLRSYLLDSYSARKLGMKPTGNASRGAGDSPTAWPTNFYLQSGPH 355
Query: 368 NLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNM 427
E+++ ++ GL VTEL+G G+N +TGDYS+GA G+WIE G++ Y V EITI+G L+ M
Sbjct: 356 EPTEIIRSVDAGLYVTELIGFGVNLVTGDYSQGAVGFWIEKGELTYPVHEITIAGNLKEM 415
Query: 428 FKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
I +G+D+ R S + ++ + M +AG
Sbjct: 416 LLGIEMVGNDLSFRQSVVAPTVKLRRMTVAG 446
>gi|145627877|ref|ZP_01783678.1| PmbA [Haemophilus influenzae 22.1-21]
gi|144979652|gb|EDJ89311.1| PmbA [Haemophilus influenzae 22.1-21]
Length = 335
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 138/337 (40%), Positives = 212/337 (62%), Gaps = 3/337 (0%)
Query: 122 LEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSH 181
+ N D +LY + +D A +A + E A + I+N+ + + NSH
Sbjct: 1 MAFNAPDLELYHAADVDVDKATELALQAEKAALEADERIINSNGASFNSHTGVKVYGNSH 60
Query: 182 GFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKA 241
G + Y S++ +S S I ++ D Y+ + + KL P +G AK+ +SRL
Sbjct: 61 GMLQSYLSSRYSLSCSVIGGVEDALENDYEYTISREFDKLQSPIWVGKNCAKKVVSRLNP 120
Query: 242 KKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPH 301
+K+STR+ PV+F +A L++ FA ISG SLYRKS+FL+D LGK++ I E PH
Sbjct: 121 QKLSTREVPVIFLNDVATGLISHFAAAISGGSLYRKSSFLLDYLGKQVLPDWFSISERPH 180
Query: 302 ILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISN 361
+L S+ FD+EGV+TQ R +V+NGI+Q Y +++YS KKLGM +TG++GG H+ ++ N
Sbjct: 181 LLRRLASTPFDSEGVRTQDREIVENGILQTYLVASYSGKKLGMPSTGHAGGIHNWLVKPN 240
Query: 362 KTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITIS 421
T L +L++M GLLVT++MG G+N +TGDYS+GA G+W+ENG+IQY V EITI+
Sbjct: 241 LTG---GLTALLRQMGAGLLVTDVMGQGVNIVTGDYSRGASGFWVENGEIQYPVAEITIA 297
Query: 422 GKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
G+LQ+M K ++A+ D+ R++ +GSIL++ M I+G
Sbjct: 298 GQLQDMLKNMLAVADDIEHRSNIQTGSILLDKMKISG 334
>gi|406966779|gb|EKD92078.1| hypothetical protein ACD_29C00203G0001 [uncultured bacterium]
Length = 284
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 133/283 (46%), Positives = 191/283 (67%), Gaps = 4/283 (1%)
Query: 176 LLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRT 235
+LAN+ GF+ Y S H S S +A + +MQRD Y+ +P L E+ AA++
Sbjct: 5 ILANTLGFIGEYQTSSHHFSCSVVASENNQMQRDEDYTVARNPTDLKSFELTAKNAAEKA 64
Query: 236 ISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQ 295
+SRL A+ I T+ CPV+F++ +A LL F+ I+G +LYR+++FLV SLGK IF I
Sbjct: 65 VSRLNARSIQTQTCPVIFKSNVAKSLLATFSSAITGGNLYRRASFLVGSLGKMIFPKFID 124
Query: 296 IIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHH 355
I + PH+L + GS+ FD EGV TQ +K G + Y L +YSA+KL +K+TGN+GG +
Sbjct: 125 IYQKPHLLSAMGSAPFDAEGVATQNLDYIKQGALINYALGSYSARKLNLKSTGNAGGIFN 184
Query: 356 LIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSV 415
L + T S +LK++ KKM+ GLLVTELMG+G+N TGDYS+G G+WI++G+IQ+ V
Sbjct: 185 LFV----THSGSDLKKLFKKMHKGLLVTELMGEGVNITTGDYSRGVSGFWIDHGEIQFPV 240
Query: 416 EEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
EEITI+G L++MF+ IV I +D+ R + +GSILI+ M IAG
Sbjct: 241 EEITIAGNLKDMFQNIVEIANDIDIRGNIRTGSILIDRMTIAG 283
>gi|206603788|gb|EDZ40268.1| Putative peptidase U62, modulator of DNA gyrase [Leptospirillum sp.
Group II '5-way CG']
Length = 452
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 169/463 (36%), Positives = 260/463 (56%), Gaps = 38/463 (8%)
Query: 19 QQLAQDMLNY----AKKIGASHSS--IEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIY 72
++ A D+L++ A +GA+ + + F++ N V VRKG+++ I++ + M
Sbjct: 3 EREALDLLSFVVDRATSLGATSADALLIFSDDN--VVGVRKGEVEKIQRTRSRGM----- 55
Query: 73 IQDGKKMFYGNS----STSDFCKKSLYDTINAAYNIARFTASDNFAGLPDE---NTLEMN 125
G ++F G+S STSD + SL + A +A T D F+GLP +
Sbjct: 56 ---GLRIFRGHSQAIVSTSDLDRSSLESLVRGAVAMAEETQPDLFSGLPGAGGGRVFSSS 112
Query: 126 PLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHF--LLANSHGF 183
L+ +S ++ +A E AF + I N+E G Q +H L N+ GF
Sbjct: 113 SLEILEDPAPDISQEERIRLALETEKAAFAEDPRIWNSE--GAEFQSTHLKSYLVNTDGF 170
Query: 184 MSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKK 243
G S + +S S IA G M+RD WY + +L PE +G +A +R ISRL ++
Sbjct: 171 SGGSARSLYGLSCSVIARDGDSMERDYWYEQSHFYHRLPHPEEVGRHAGRRAISRLHPRR 230
Query: 244 ISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHIL 303
T CPVLF+A +A L++ +SG SLYR +T+L D ++ S+ + I EDP +
Sbjct: 231 PKTTTCPVLFDAEVARSLVSHLIGALSGYSLYRNATYLRDRENSRVASTGVTIREDPLLP 290
Query: 304 GSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNS----GGAHHL--- 356
G FGS FD EGV ++ +++V++GI++ Y YS +K G TTGN+ G A H+
Sbjct: 291 GGFGSRPFDGEGVVSKPKVIVEHGILKTYLFDAYSGRKNGRSTTGNASRSLGDAPHVGVS 350
Query: 357 -IIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSV 415
I++ +S D E+L M GL VTEL+G G+N +TGDYS+GAFG+W+E+G+IQ+ V
Sbjct: 351 NILVEPGGRSKD---ELLHDMKRGLYVTELIGFGVNAVTGDYSRGAFGFWVEDGEIQFPV 407
Query: 416 EEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
E+TI+G L +MF+ IV +G+D R+S +S SIL+E+M I G
Sbjct: 408 SELTIAGNLDDMFQSIVEVGNDRRIRSSISSPSILLESMRIGG 450
>gi|429088149|ref|ZP_19150881.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Cronobacter universalis NCTC 9529]
gi|426507952|emb|CCK15993.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Cronobacter universalis NCTC 9529]
Length = 280
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 126/284 (44%), Positives = 187/284 (65%), Gaps = 4/284 (1%)
Query: 176 LLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRT 235
+ NSHG + Y ++H +S IA + +M+RD Y+ L PE +G A+RT
Sbjct: 1 MFGNSHGMLQSYSSTRHSLSSCVIAEENGDMERDYAYTIGRALGDLQSPEWVGEECARRT 60
Query: 236 ISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQ 295
+SRL +K+ T K PV+F +A L ISG ++YRKSTFL+DSLGK+I +
Sbjct: 61 LSRLSPRKLPTMKAPVIFGREVATGLFGHLVGAISGGAVYRKSTFLLDSLGKQILPEWLT 120
Query: 296 IIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHH 355
I E PH+L S+ FD+EGV T +R ++K+G++Q + L+ YSA+KLG+K+TG++GG H+
Sbjct: 121 IEEHPHLLKGLASTPFDSEGVATSRRDIIKDGVLQQWLLTNYSARKLGLKSTGHAGGIHN 180
Query: 356 LIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSV 415
+ +++LK+M TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V
Sbjct: 181 W----RRPPEPSLFEQLLKEMGTGLVVTELMGQGVSGITGDYSRGAAGFWVENGEIQYPV 236
Query: 416 EEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
EITI+G L+ M++ +V IG D+ TR++ GS+L+ M IAG+
Sbjct: 237 SEITIAGNLKEMWRNMVTIGDDIETRSNIQCGSVLLPEMKIAGE 280
>gi|429111690|ref|ZP_19173460.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Cronobacter malonaticus 507]
gi|426312847|emb|CCJ99573.1| TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
(PMID 12029038) [Cronobacter malonaticus 507]
Length = 280
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 127/284 (44%), Positives = 189/284 (66%), Gaps = 4/284 (1%)
Query: 176 LLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRT 235
+ NSHG + Y ++H +S IA + +M+RD Y+ L+ PE +G A+RT
Sbjct: 1 MFGNSHGMLQSYSSTRHSLSSCVIAEENGDMERDYAYTIGRALGDLESPEWVGEECARRT 60
Query: 236 ISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQ 295
+SRL +K+ T K PV+F +A L ISG ++YRKSTFL+DSLGK+I +
Sbjct: 61 LSRLSPRKLPTMKAPVIFGREVATGLFGHLVGAISGGAVYRKSTFLLDSLGKQILPEWLT 120
Query: 296 IIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHH 355
I E PH+L S+ FD+EGV T +R ++K+G++Q + L+ YSA+KLG+K+TG++GG H+
Sbjct: 121 IEEHPHLLKGLASTPFDSEGVATSRRDIIKDGVLQQWLLTNYSARKLGLKSTGHAGGIHN 180
Query: 356 LIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSV 415
I + +++LK+M TGL+VTELMG G++ ITGDYS+GA G+W+ENG+IQY V
Sbjct: 181 WRIKGRGL----SFEQLLKEMGTGLVVTELMGQGVSGITGDYSRGAAGFWVENGEIQYPV 236
Query: 416 EEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
EITI+G L+ M++ +V IG D+ TR++ GS+L+ M IAG+
Sbjct: 237 SEITIAGNLKEMWRNMVTIGDDIETRSNIQCGSVLLPEMKIAGE 280
>gi|320105771|ref|YP_004181361.1| peptidase U62 modulator of DNA gyrase [Terriglobus saanensis
SP1PR4]
gi|319924292|gb|ADV81367.1| peptidase U62 modulator of DNA gyrase [Terriglobus saanensis
SP1PR4]
Length = 460
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 158/465 (33%), Positives = 256/465 (55%), Gaps = 22/465 (4%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
I +K + +QL D++ A K GA+ + EG+ F V VR G+++ + ++ + + +
Sbjct: 2 MIETKKDLKQLVADVVERAIKAGATDAEAVAYEGDEFEVKVRLGQVETLVESGSRGLGLR 61
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLE--MNPLD 128
++ + ++STSD + + + A +++ T D FAGLP+ N
Sbjct: 62 VF----NGLRTASTSTSDLSDEGIAHLVKGAVELSKITGEDPFAGLPEAGAFSEVRNSEG 117
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNS--LIVNNENTGVTTQQSHFLLANSHGFMSG 186
L+ S+ + IAY E N+ I N++ S ++ANS GF
Sbjct: 118 MGLFFEDVYSLPAEERIAYARRAEEAAMNADVRIQNSDGGTFDAATSRKVMANSRGFAGE 177
Query: 187 YPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
Y S +S PIA MQRD WYSS +L+ PE +G AA+R + RL A+K+ T
Sbjct: 178 YKKSYCSVSAMPIAQDANGMQRDYWYSSARTMTRLESPESVGKEAARRAVRRLGARKVKT 237
Query: 247 RKCPVLFEAPLAFELL-NIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHI--- 302
++ ++F +A L+ NIF +G ++YR +TF LG+++ +I +++D +
Sbjct: 238 QRASMVFPPEIARSLIGNIF-EAANGEAIYRHATFFDGKLGERVAGENITVVDDGTMMLE 296
Query: 303 --LGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNS----GGAHHL 356
L FG+ FD +G+ Q+ ++V+ GI++ Y ++TY+A+KLGMK+TGN+ GGA
Sbjct: 297 PGLAGFGTLPFDGDGLPRQRTVIVEKGILKSYVMNTYTARKLGMKSTGNATRGLGGAPG- 355
Query: 357 IIISN--KTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYS 414
I N + L+E++ ++ GL V E +G G+N +TGDYS+GA G WIENG+ +
Sbjct: 356 IGAGNFYLEPGTQTLEEIVGEVQNGLYVYETLGSGVNLVTGDYSQGASGLWIENGEFTGA 415
Query: 415 VEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
VEEITI+G L+ M+ IVAIGSD++ R + +I IE M IAG+
Sbjct: 416 VEEITIAGNLKEMYSNIVAIGSDLVWRGATAVPTIRIEGMTIAGE 460
>gi|407000516|gb|EKE17788.1| hypothetical protein ACD_10C00271G0002, partial [uncultured
bacterium]
Length = 292
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/292 (43%), Positives = 184/292 (63%), Gaps = 4/292 (1%)
Query: 9 SKFIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMN 68
+ F Y + QQLA+D+L +A++ GA+ ++ +EG G SV VR +++ IE N DK +
Sbjct: 5 AAFSYPFATLQQLAEDVLKHAREKGATACEVDASEGFGQSVGVRCNEVETIEFNRDKGVG 64
Query: 69 VIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD 128
+ +Y K G +STSDF ++L +T+ AA NIARFTA D+ AGL D + + D
Sbjct: 65 ITVYAGQRK----GYASTSDFSAQALRETVEAALNIARFTAEDDCAGLADAALMAKDCPD 120
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
L+ PW L+++DA A RCE AF+ + I N+E V+TQQ+ F+ ANS GFM GYP
Sbjct: 121 LDLFHPWALTVEDAIETARRCEQAAFDASPKISNSEGASVSTQQAQFVSANSLGFMGGYP 180
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
S+H IS S IA + MQRD+WY+++ D L ++G AA+R ++RL +K+ T +
Sbjct: 181 TSRHYISCSVIAGEQDAMQRDDWYTTHRDAALLGDAALVGRTAAERAVARLGGRKVKTGE 240
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDP 300
PVLFEAPLA L+ +SG +LYRKS+FL+D LGK++ +Q+ E P
Sbjct: 241 VPVLFEAPLAAGLIGSLVHAVSGGALYRKSSFLLDQLGKRVMPEFVQLSERP 292
>gi|94971785|ref|YP_593833.1| microcin-processing peptidase 1 [Candidatus Koribacter versatilis
Ellin345]
gi|94553835|gb|ABF43759.1| microcin-processing peptidase 1 [Candidatus Koribacter versatilis
Ellin345]
Length = 460
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 149/463 (32%), Positives = 260/463 (56%), Gaps = 30/463 (6%)
Query: 14 SKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYI 73
S + ++L+ D++ A K GA+ + + +G+ FS VR G+++ ++++ ++M V
Sbjct: 11 STVDLRELSADVVRKAMKGGATAAEVVLRDGSEFSTTVRLGEVETLKESGSRSMGV---- 66
Query: 74 QDGKKMFYGNSS----TSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDF 129
++F+G S +SDF + + + + A ++A+ T+ D F+G+P+ L +
Sbjct: 67 ----RVFFGKRSASTWSSDFSPQGIDNMVRGALDLAKITSEDPFSGIPEPEQLGQITTNL 122
Query: 130 KLYTPWFLSIDDAKLIAY--RCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
LY S+ A I Y R E A + I N++ +LANS+GF+ Y
Sbjct: 123 DLYYEDVYSLSTADRIDYAKRAERAAMEADPRIQNSDGASFDAANGVKVLANSNGFIGDY 182
Query: 188 PFSKHIISISPIAIK-GKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST 246
S +S PIA + G MQRD W+S L+ PE +G AA+R + RL AKK+ T
Sbjct: 183 SRSYCSVSAVPIAQQEGSAMQRDYWFSVARTLSMLESPEDVGREAARRALRRLGAKKVKT 242
Query: 247 RKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSF 306
+ P++F+ +A LL ++G+S+YR +++L L +KI +++ I++D ++G F
Sbjct: 243 ARVPIVFDPLVAGSLLGHIFEAVNGDSVYRGASYLAGKLNEKIAGANVTIVDDGTMVGGF 302
Query: 307 GSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNS----------GGAHHL 356
GSS FD EGV T++ +V++ GI+ Y L+TY+AKKL ++TTGN+ G +
Sbjct: 303 GSSPFDAEGVPTRRTVVIEKGILNSYLLNTYTAKKLKLQTTGNAARGLAGTPGIGAGNFF 362
Query: 357 IIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVE 416
+ +T +++ + G VTE +G G+N +TGD+S+GA G WI+NG++ + VE
Sbjct: 363 MEPGTRTP-----QQIFADVKDGFYVTEFLGSGVNLVTGDFSRGASGVWIQNGELTFPVE 417
Query: 417 EITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
E+T++G L++M +V IG+D+ R S ++ I+ M + G+
Sbjct: 418 EVTVAGNLRDMLHSVVEIGNDLEFRGSVACPTMRIDGMTVGGE 460
>gi|374313489|ref|YP_005059919.1| peptidase U62 modulator of DNA gyrase [Granulicella mallensis
MP5ACTX8]
gi|358755499|gb|AEU38889.1| peptidase U62 modulator of DNA gyrase [Granulicella mallensis
MP5ACTX8]
Length = 474
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 153/472 (32%), Positives = 248/472 (52%), Gaps = 32/472 (6%)
Query: 14 SKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYI 73
SK E Q LA D++ A + GA+ + E FSV +R G+++ + ++ + + + ++
Sbjct: 7 SKIELQSLAADVVARALQAGATDAEAVGFESEEFSVNIRLGQVEQLTESGSRALGLRVFF 66
Query: 74 QDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD-FKLY 132
++STSD ++ L + A +A+ T D FAGLP+ +D LY
Sbjct: 67 PSQGGQRTASTSTSDLSREGLEQLVRGAVELAKVTGIDPFAGLPEREAFGSQNVDELALY 126
Query: 133 TPWFLSIDDAKLI--AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
I A+ I A RCE A F++ I N+ + ++ NS GF Y S
Sbjct: 127 FDDVHDIPAAERIDLARRCEAAAMGFDTRIQNSRGADFDASNARRVMVNSRGFAGEYRRS 186
Query: 191 KHIISISPIAIKGK-EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKC 249
S +PIA MQ +WYSS K L+ PE IG AAKR + RL A+++ T+KC
Sbjct: 187 YCGFSAAPIAQDASGAMQGGSWYSSARSAKLLESPEEIGIIAAKRALRRLGARRVPTQKC 246
Query: 250 PVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIED-----PHIL- 303
PV+F A L+ G+++YR ++ LG+++ +I +++D H L
Sbjct: 247 PVVFAPETARGLMGNLLNAADGDAIYRNASMFAGKLGEQVAGENITMVDDGTMVFDHALA 306
Query: 304 -------GSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNS------ 350
G FG+S FD +G+ T++ +V++ G+++ L+TY+A+KLGM+TT +
Sbjct: 307 DGSTLRVGGFGTSPFDGDGLPTRRTMVIERGVLKELMLNTYTARKLGMQTTHKASRGLAG 366
Query: 351 ----GGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWI 406
GG ++ + T ++++ + +GL V + MG G+N +TGDYS G G WI
Sbjct: 367 APGIGGGNYFLEPGTATP-----EQIIGDVQSGLYVLQTMGTGVNLVTGDYSLGVSGLWI 421
Query: 407 ENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
ENG++ Y VEEITI+G L++MF+ + AIG D+ R S ++ +E M +AG
Sbjct: 422 ENGELAYPVEEITIAGNLKDMFRNVSAIGDDLEFRGSGAVPTVRVEGMTVAG 473
>gi|289676073|ref|ZP_06496963.1| pmbA protein [Pseudomonas syringae pv. syringae FF5]
Length = 250
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 122/253 (48%), Positives = 173/253 (68%), Gaps = 4/253 (1%)
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
MQRD WY N + L + IG AA R SRL A+ + T + PVLF A LA L F
Sbjct: 1 MQRDYWYDVNRQGELLADAQSIGRKAALRAASRLGARPVPTCEVPVLFAAELAGGLFGSF 60
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
ISG +LYRKS+FL +LG+++F + I E PH+ + GSS+FD++G+ T + V+
Sbjct: 61 LGAISGGTLYRKSSFLEGALGQRLFPEWMTIDERPHLKHAMGSSAFDSDGLATFAKPFVE 120
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
G + Y LSTYS +KLGM +T N+GG H+L + T SD+ ++++M GLLVTEL
Sbjct: 121 GGDLVSYVLSTYSGRKLGMPSTANAGGVHNLFV----THGSDDQAALIRRMGRGLLVTEL 176
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
MG G+N +TGDYS+GA G+W+ENG+IQ+ V+E+TI+G +++MFKQIVA+GSD+ R++
Sbjct: 177 MGSGLNMVTGDYSRGAAGFWVENGEIQFPVQEVTIAGNMRDMFKQIVAVGSDLELRSNIR 236
Query: 446 SGSILIENMIIAG 458
+GS+LIE M +AG
Sbjct: 237 TGSVLIERMTVAG 249
>gi|213027353|ref|ZP_03341800.1| peptidase PmbA [Salmonella enterica subsp. enterica serovar Typhi
str. 404ty]
Length = 254
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 120/255 (47%), Positives = 175/255 (68%), Gaps = 4/255 (1%)
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
+M+RD Y+ L PE +G A+RT+SRL +K+ST K PV+F +A L
Sbjct: 4 DMERDYAYTIGRAMADLQAPEWVGAECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGH 63
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
I+G ++YRKSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +V
Sbjct: 64 LVGAIAGGAVYRKSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIV 123
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTE 384
K+G++ + L+ YSA+KLG+K+TG++GG H+ I N +++LK+M TGL+VTE
Sbjct: 124 KDGVLTQWLLTNYSARKLGLKSTGHAGGIHNWRIAGQGL----NFEQLLKEMGTGLVVTE 179
Query: 385 LMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSN 444
LMG G++ ITGDYS+GA G+W+ENG+IQY V EITI+G L+ M++ IV +G D+ TR++
Sbjct: 180 LMGQGVSGITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNI 239
Query: 445 TSGSILIENMIIAGK 459
GS+L+ M IAG+
Sbjct: 240 QCGSVLLPEMKIAGQ 254
>gi|238764588|ref|ZP_04625534.1| Protein pmbA [Yersinia kristensenii ATCC 33638]
gi|238697178|gb|EEP89949.1| Protein pmbA [Yersinia kristensenii ATCC 33638]
Length = 250
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/254 (47%), Positives = 175/254 (68%), Gaps = 4/254 (1%)
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
M+RD Y+ + L PE IG A+RT+SRL +K+ T + PVLF A +A L
Sbjct: 1 MERDYAYTIGRRMEDLANPEWIGEECARRTLSRLSPRKLPTMQSPVLFAAEVATGLFGHL 60
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
ISG ++YRKSTFL+D LGK+I + I E PH+L S+ FD+EGV+T +R +VK
Sbjct: 61 VSAISGGNIYRKSTFLLDHLGKQILPEWLTIEEHPHLLRGLASTPFDSEGVRTLQREIVK 120
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
+G++Q Y L++YSA+KLG+++TG++GG H+ I + MLK+++ GL+VTEL
Sbjct: 121 DGVLQTYLLTSYSARKLGLQSTGHAGGIHNWRIAGQ----GQDFAGMLKQLDKGLVVTEL 176
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
MG G++ +TGDYS+GA G+W+ENG+IQY V EITI+G L++M + IV++GSD+ TR++
Sbjct: 177 MGQGVSTVTGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMLRNIVSVGSDIETRSNIQ 236
Query: 446 SGSILIENMIIAGK 459
GSIL+ M IAG+
Sbjct: 237 CGSILLPAMKIAGE 250
>gi|419912966|ref|ZP_14431413.1| peptidase PmbA, partial [Escherichia coli KD1]
gi|388390866|gb|EIL52342.1| peptidase PmbA, partial [Escherichia coli KD1]
Length = 243
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 116/239 (48%), Positives = 171/239 (71%), Gaps = 4/239 (1%)
Query: 221 LDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTF 280
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YRKSTF
Sbjct: 9 LQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYRKSTF 68
Query: 281 LVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAK 340
L+DSLGK+I + I E PH+L S+ FD+EGV+T++R +VK+GI+ + L++YSA+
Sbjct: 69 LLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIVKDGILTQWLLTSYSAR 128
Query: 341 KLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKG 400
KLG+K+TG++GG H+ I + ++MLK+M TGL+VTELMG G++ ITGDYS+G
Sbjct: 129 KLGLKSTGHAGGIHNWRIAGQGL----SFEQMLKEMGTGLVVTELMGQGVSAITGDYSRG 184
Query: 401 AFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
A G+W+ENG+IQY V EITI+G L++M++ IV +G+D+ TR++ GS+L+ M IAG+
Sbjct: 185 AAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKIAGQ 243
>gi|407775461|ref|ZP_11122755.1| putative peptidase, PmbA-like protein [Thalassospira profundimaris
WP0211]
gi|407281468|gb|EKF07030.1| putative peptidase, PmbA-like protein [Thalassospira profundimaris
WP0211]
Length = 449
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 150/450 (33%), Positives = 252/450 (56%), Gaps = 27/450 (6%)
Query: 24 DMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGN 83
D+L AKK GA + + EG SV R GK++ +E++ ++ + + I GK+
Sbjct: 13 DLLAQAKKAGADDADAVYVEGTSLSVAQRLGKMEKLERSEGADLGLRVLI--GKQQAV-- 68
Query: 84 SSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLE--MNPLDFKLYTPWFLSIDD 141
S+SD +L + + A +A+ D + G+ D + L N +L P +D
Sbjct: 69 VSSSDTSDAALAELVERAVAMAKNAPEDPYCGIADPSELAETFNVEALELCEPG--EVDQ 126
Query: 142 AKLI--AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPI 199
KLI A CE A + + I N+E + + LA ++GF + Y S IS+S +
Sbjct: 127 DKLIEWASACEEAARSVDG-ITNSEGSEAGWGRHQITLAATNGFANSYAGSGCHISVSVL 185
Query: 200 AIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAF 259
A G M+RD Y S L P IG AA++T+ RL +K+ + + PV+++ ++
Sbjct: 186 AGTGTGMERDYDYDSAVFSTDLRDPVDIGKKAAEKTLRRLNPRKVKSAQVPVIYDPRVSA 245
Query: 260 ELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQ 319
++ + I+G+++ R ++FL+D++G +IF+ HI II+DPH S FD EGV Q
Sbjct: 246 SIVGHLSSAINGSAIARGTSFLLDAMGSEIFAPHINIIDDPHRKRGLRSKPFDAEGVANQ 305
Query: 320 KRLVVKNGIIQGYFLSTYSAKKLGMKTTGN-SGGAHHLIIISNKTKSSDNL--------- 369
KR +++NG+++ + + SA++LG+K+TGN S GA L S+ NL
Sbjct: 306 KRHLIENGVLKTWIMDLRSARQLGLKSTGNASRGAGSL-----PGPSTTNLYMEPGTISP 360
Query: 370 KEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFK 429
++M+K + +GL +TE++G +N +TGDYS+GA GYWIENG++ Y V EIT++G L++MFK
Sbjct: 361 EDMIKDIKSGLYITEMIGSSVNGVTGDYSRGASGYWIENGELAYPVSEITVAGNLKDMFK 420
Query: 430 QIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+V +D+ + + ++ I+ M +AG+
Sbjct: 421 TVVP-ANDLTFKYGTNAPTLRIDGMTLAGQ 449
>gi|384226462|ref|YP_005618213.1| PmbA protein, partial [Buchnera aphidicola str. JF98 (Acyrthosiphon
pisum)]
gi|311087559|gb|ADP67638.1| PmbA protein [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)]
Length = 311
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/309 (41%), Positives = 196/309 (63%), Gaps = 4/309 (1%)
Query: 150 ENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRD 209
E AF + IVN+E + + + + + NS G + Y +++ IA MQRD
Sbjct: 6 EKSAFESDKRIVNSEGSFLNSHTTINVFGNSLGVLEKYKSTRYSNYTCMIAQDKNSMQRD 65
Query: 210 NWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLI 269
YS + L +PEI+G AKR ISRL ++KI T + P++F + ++ + A I
Sbjct: 66 FDYSLSRRIDDLIKPEILGQKTAKRAISRLGSRKIQTMRSPIIFSSEISHMFFSHLASAI 125
Query: 270 SGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGII 329
SG+++Y+KSTFL++ L KIF + I E+PH+ GS FDNEGV T+ + ++K GI+
Sbjct: 126 SGDNVYQKSTFLINDLKMKIFPDWLDIEENPHLKRGLGSKPFDNEGVATEIKYIIKAGIL 185
Query: 330 QGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDG 389
Q + L+ Y+A+KL + +TGN GG H+ ++SN+ S +E+LKKM+ G+LVTELMG G
Sbjct: 186 QTWLLNCYNARKLKLDSTGNCGGIHNW-LVSNQNIS---FEELLKKMDQGILVTELMGQG 241
Query: 390 INYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSI 449
++ I G+YS+GA G+W+E GKI Y + EITISG L+NM+ IV+I SDV RN+ GS+
Sbjct: 242 VDIINGNYSRGAVGFWVEKGKISYPINEITISGNLRNMWNNIVSISSDVDRRNNIQCGSV 301
Query: 450 LIENMIIAG 458
L+ + ++G
Sbjct: 302 LLSEIQVSG 310
>gi|262276806|ref|ZP_06054599.1| protein for maturation of antibiotic MccB17 [alpha proteobacterium
HIMB114]
gi|262223909|gb|EEY74368.1| protein for maturation of antibiotic MccB17 [alpha proteobacterium
HIMB114]
Length = 439
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 162/449 (36%), Positives = 241/449 (53%), Gaps = 10/449 (2%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
+ SK LAQ ++ +K++GA+ + + S+ R K++ +++ ++ +
Sbjct: 1 MLKSKDNLADLAQKCISKSKELGATDVEVGLSNNISESINFRNKKLEQSDRSEVLSLGLT 60
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
YI GKK N STS+F +++L I + + D +AGLPD+N LE D
Sbjct: 61 TYI--GKKK--SNVSTSNFNEENLNQLIERCIECTKISPEDEYAGLPDKNELENKVQDLN 116
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY LS D K ENE F+F I N+ + + +S+F+ ANS GF GY S
Sbjct: 117 LYDEKNLSNDFKKNYLKEMENEMFSFPE-IKNSNGSSFSENKSNFIFANSIGFCEGYYAS 175
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCP 250
+ + +A K +M+RD S N L + +G AA++ RL AKKI + K P
Sbjct: 176 SYSVFCEALAEKNGQMERDYEMSVNRFSDNLSTAKEVGKLAAEKACKRLGAKKIVSGKLP 235
Query: 251 VLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSS 310
++FE +A LL+ FA ++G+S R +FL SLGK+IFS I II+DP I GS S
Sbjct: 236 IIFEKRVAKSLLSTFASAVTGSSFARGISFLKKSLGKEIFSKEINIIDDPLIKRGLGSQS 295
Query: 311 FDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLK 370
FD+EGVK QK +VKNG L TY++K L +K G GG +L I + T +LK
Sbjct: 296 FDSEGVKNQKIDLVKNGKFTNLLLDTYNSKILKLKNNGRCGGLTNLYIKNGNT----DLK 351
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+++ + V EL+G + G+YS GA G IENG+I Y V E+TI+ L ++FK
Sbjct: 352 KIISEQKKAFFVLELIGRAGDITNGNYSVGASGLMIENGEIAYPVNEVTIASNLTDIFKM 411
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+ + +D+ S S S+ IE M +AGK
Sbjct: 412 LTPL-NDLDFTTSVNSPSLFIEQMTVAGK 439
>gi|162450304|ref|YP_001612671.1| PmbA protein [Sorangium cellulosum So ce56]
gi|161160886|emb|CAN92191.1| PmbA protein [Sorangium cellulosum So ce56]
Length = 446
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/448 (32%), Positives = 237/448 (52%), Gaps = 13/448 (2%)
Query: 20 QLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKM 79
+LA+ ++ A+K GA + G+ + VR G+ +++E+ K + + I KK
Sbjct: 2 ELAEQVVTRARKGGADVAEAIARSGSELTTKVRLGEPELVEEAVHKGLGMRII----KKQ 57
Query: 80 FYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLD-FKLYTPWFLS 138
+STSD + + + A +A + D FAG D + PL LY P
Sbjct: 58 RVALTSTSDLTPRGIDRFVADALELADISQEDAFAGPADPELIAKGPLPALDLYDPSGGE 117
Query: 139 IDDAKLI--AYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
+ A+ I A R E A + + I N+E + F L S GF G+ S + +
Sbjct: 118 VTAAQAIDIARRGEQAARDADPRITNSEGATFSRSAGAFALVLSGGFRGGFAGSYAQLVV 177
Query: 197 SPIAI-KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEA 255
SPIA G + +R +++ LD P+ +G AA+RT+ +L A+K++T + PV+F+
Sbjct: 178 SPIADDSGDKKRRGFYFTGRRHLADLDAPDAVGREAARRTLRKLGARKVATCEAPVVFDP 237
Query: 256 PLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEG 315
+A +L + I G+S++RKS++LV G +I S I +++DP I + GS FD EG
Sbjct: 238 DVARSMLGLLGSCIMGSSIWRKSSYLVGREGTRIASDLITVVDDPLIPRAPGSRPFDGEG 297
Query: 316 VKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGN-SGGAHHLIIISNK----TKSSDNLK 370
+ ++ +VV+ GI++ Y +YS +KL T + S GA + S +S
Sbjct: 298 LLARRNVVVEQGILKTYLCDSYSGRKLKRPPTASASRGAGGGVGPSTSNFLLQPTSTPAA 357
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
E+++ GL VTE+MG G N +TGD+S+GA G+WIENG++ Y V E+TIS L + ++
Sbjct: 358 EIVRSTPRGLYVTEMMGFGFNAVTGDFSRGASGFWIENGELAYPVSEVTISLNLDELLQR 417
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
I A+G D+ R S S + + +M IAG
Sbjct: 418 IDAVGDDLDLRTSTCSPTFRVSSMTIAG 445
>gi|390959060|ref|YP_006422817.1| microcin-processing peptidase 1 [Terriglobus roseus DSM 18391]
gi|390413978|gb|AFL89482.1| microcin-processing peptidase 1 [Terriglobus roseus DSM 18391]
Length = 463
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 152/463 (32%), Positives = 259/463 (55%), Gaps = 25/463 (5%)
Query: 14 SKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYI 73
SK++ + LA ++++ A GAS + EG+ F VR G+++ + ++ + + + ++
Sbjct: 7 SKTDLKTLAIELVDRALCAGASDAEAVVFEGDEFYTKVRLGQVETLTESTSRAIGLRVF- 65
Query: 74 QDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPD----ENTLEMNPLDF 129
+ ++ST+D + SL ++ A +++ T D FAGLPD + + + L
Sbjct: 66 ---NGLRTASTSTNDLSEASLKQLVHGAIELSKITEEDPFAGLPDASEYSSVRDSDHLGI 122
Query: 130 KLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPF 189
+ L +D +A E A + I N++ + SH +ANS GF Y
Sbjct: 123 YFDDVYQLPAEDRIAMARATEAAAMAADVRIQNSDGGTFSASTSHKAMANSRGFAGHYRK 182
Query: 190 SKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKIST-RK 248
S I +PIA MQRD W S +KLD PE +G AAKR + RL A+++ T R
Sbjct: 183 SYCGIGTTPIAQDANGMQRDGWGSGARTLRKLDSPEEVGAEAAKRALRRLGARRVPTQRG 242
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHI-----L 303
++F +A ++ ++G+++YRK++ +G+++ S + +++D + L
Sbjct: 243 ASMVFSREIARGIIGDIFDAVNGDAIYRKASMFEGMVGEQVASPLVTVVDDGTMMLEDWL 302
Query: 304 GSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNS----GGAHHL--- 356
G FG+ +D +G+ +++++V GI+Q Y +TY+A+KLG K+TGN+ GGA +
Sbjct: 303 GGFGTLPYDGDGLPMRRKVIVDKGILQTYVTNTYTARKLGTKSTGNASRGLGGAPGIGSG 362
Query: 357 -IIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSV 415
+ T++ +E++ ++ TGL VTE++G G+N +TGDYS+GA G WIENG +V
Sbjct: 363 NFYLEAGTQTP---REIIAEVQTGLYVTEVLGSGVNLVTGDYSQGASGIWIENGVFTGAV 419
Query: 416 EEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
EEITI+G L++M+K IVA+G+D++ R S S I IE M IAG
Sbjct: 420 EEITIAGNLKDMYKNIVAVGNDLIFRGSAASPCIRIEGMTIAG 462
>gi|118590714|ref|ZP_01548115.1| modulator of DNA gyrase protein [Stappia aggregata IAM 12614]
gi|118436690|gb|EAV43330.1| modulator of DNA gyrase protein [Stappia aggregata IAM 12614]
Length = 447
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 139/458 (30%), Positives = 249/458 (54%), Gaps = 26/458 (5%)
Query: 12 IYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVII 71
+ +SE Q A ++ A+K GA G SV VR+GK++ E+ ++ + +
Sbjct: 4 LIDQSELQSRATRLVEAARKAGADACDAIAVTGVSLSVDVREGKVEETERAEGDDVTLRV 63
Query: 72 YIQDGKKMFYGNSSTSDFCKKSLYDTIN---AAYNIARFTASDNFAGLPDENTLEMNPLD 128
++ GK+ T+ L D + A +A+ D +AGL D++ L + +
Sbjct: 64 FV--GKR-------TAAVSANRLDDPASLAERAVAMAKVAPEDPYAGLADQDLLVKDFPE 114
Query: 129 FKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
+L ++ +D IA E + + + G + + + +LA SHGF Y
Sbjct: 115 LELLDTKEMTAEDLTQIALEAEAAGLDVEG-VTKSGGAGASWRLAGIVLATSHGFEGSYM 173
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
S++ +S++ +A +G M+RD + S + + L+ P IG A +R + RL K+STR
Sbjct: 174 SSRYGMSMTAVAGEGTGMERDYDFDSRTFFEDLEAPAEIGRRAGERAVRRLNPNKLSTRT 233
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
V++E+ A +L I+G ++ RK++FL D +G+ +F+ IQ+++DP +
Sbjct: 234 ANVIYESRAARSILGHLVGAINGAAIARKTSFLRDRMGEAVFAPGIQVVDDPFKRRGAAT 293
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKT--------TGNSGGAHHLIIIS 360
FD EG + ++ V+++G+++ +FL SA++LG+ +G S GA ++ ++
Sbjct: 294 RPFDGEGTRAERLDVIEDGVLRHWFLDGASARELGLTPNGRAHRSGSGTSPGATNITLMP 353
Query: 361 NKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITI 420
+ L++++ + GLLVT+L+G G+N +TGDYS+GA G+W ENG+I +V EITI
Sbjct: 354 GEK----TLEDLMAEAGQGLLVTDLIGHGVNTLTGDYSRGAAGFWFENGQIVEAVSEITI 409
Query: 421 SGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+G L++MF ++V GSD+ R S + S++IE M +AG
Sbjct: 410 AGNLKDMFARLVP-GSDLDNRYSAATPSVMIEGMALAG 446
>gi|167041361|gb|ABZ06114.1| putative modulator of DNA gyrase [uncultured marine microorganism
HF4000_005K23]
Length = 438
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 237/450 (52%), Gaps = 14/450 (3%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
I K +++A + ++ AKK+GA+ + + +V R ID ++++ + +
Sbjct: 1 MIKDKKFLEEIAANCIDKAKKLGATDCEVTLSNNISETVNFRNKNIDESKRSDVIGIEIS 60
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
YIQ K N S+S+ + +L I + + T D + LP+++ L D +
Sbjct: 61 TYIQKKK----SNISSSNINEDNLDSLITRCIEMTKITPEDEYNSLPNKDLLATEHKDLE 116
Query: 131 LYTPWFLSIDDAKLIAY--RCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
LY +SI + K I Y + E AF + I N E + +S+F+LANS GF GY
Sbjct: 117 LYDE--ISISNEKKIDYLKQAEESAFQ-DKRITNTEGSSFIQDKSNFVLANSLGFSMGYQ 173
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
S + S IA M++D Y+ L P ++G AA+R I +L KKI + K
Sbjct: 174 SSIYSASCDVIAKSNGSMEKDYEYTQKRFFSDLKPPRMLGNEAAERAIKKLNPKKIKSEK 233
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
P++FE +A LL+ FA IS +S R ++FL D L K IFS I II+DP I + GS
Sbjct: 234 IPIIFEQRVAKSLLDPFANAISASSFARGTSFLKDKLNKNIFSKDINIIDDPLISKALGS 293
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
FD+EGVK+ K +VK G ++ L TY K L M++ G GG +L N TKS
Sbjct: 294 QIFDSEGVKSNKVTLVKEGSLKNLLLDTYYGKILKMESNGRCGGTTNL-YFENGTKS--- 349
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
KE+L L + EL+G G N +TGDYS GA G IENG+ Y + EITI+G L MF
Sbjct: 350 CKELLNAHTKALYINELIGRGANIVTGDYSVGASGMLIENGEFSYPINEITIAGNLSEMF 409
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
I + +D+ + S +++IE M++AG
Sbjct: 410 NNIT-LANDLEFSYATNSPTLMIEGMVLAG 438
>gi|407770800|ref|ZP_11118166.1| putative peptidase, PmbA-like protein [Thalassospira xiamenensis
M-5 = DSM 17429]
gi|407286183|gb|EKF11673.1| putative peptidase, PmbA-like protein [Thalassospira xiamenensis
M-5 = DSM 17429]
Length = 449
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 147/448 (32%), Positives = 244/448 (54%), Gaps = 23/448 (5%)
Query: 24 DMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGN 83
D+L AKK GA + + EG SV R GK++ +E++ ++ + + I GK+
Sbjct: 13 DLLARAKKAGADDADAVYVEGTSLSVSQRLGKMEKLERSEGADLGLRVLI--GKQQAV-- 68
Query: 84 SSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLE--MNPLDFKLYTPWFLSIDD 141
S+SD + +L + + A +A+ D F G+ D + L + +L P +S +
Sbjct: 69 VSSSDTSESALNELVERAVAMAKNAPEDPFCGIADPSELAETFDVEALELCEPGEVSQEK 128
Query: 142 AKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAI 201
A CE A + I N+E LA ++GF + Y S IS+S +A
Sbjct: 129 LMAWATTCEEAARSVEG-ITNSEGADAGWGTHQITLAATNGFANSYAGSGSHISVSVLAG 187
Query: 202 KGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFEL 261
G M+RD Y S L P IG AA++T+ RL +K+ + + PV+++ ++ L
Sbjct: 188 TGTGMERDYDYDSAVFSTDLRDPVEIGLKAAEKTLKRLNPRKVKSTQVPVIYDPRVSASL 247
Query: 262 LNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKR 321
+ A I+G+ + R ++FL+D++GK+IF+ I II++PH S FD EGV +KR
Sbjct: 248 VGHLAGAINGSGIARGTSFLLDAMGKEIFAPGINIIDNPHRKRGLRSKPFDAEGVANEKR 307
Query: 322 LVVKNGIIQGYFLSTYSAKKLGMKTTGN-SGGAHHLIIISNKTKSSDNL---------KE 371
+++NG+++ + + SA++LG+K+TGN S GA L S+ NL +
Sbjct: 308 HLIENGVLKTWIMDLRSARQLGLKSTGNASRGAGSL-----PGPSTTNLYMEPGTISPAD 362
Query: 372 MLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQI 431
M+K + GL +TE++G +N +TGDYS+GA G+WIENG++ Y V EIT++G L++MFK
Sbjct: 363 MIKDIKQGLYITEMIGSSVNGVTGDYSRGASGFWIENGELAYPVSEITVAGNLKDMFKTA 422
Query: 432 VAIGSDVLTRNSNTSGSILIENMIIAGK 459
V +D+ + + +I I+ M +AG+
Sbjct: 423 VP-ANDLTFKYGTNAPTIRIDGMTLAGQ 449
>gi|417535788|ref|ZP_12189147.1| TldE/PmbA protein, partial [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|353655942|gb|EHC96826.1| TldE/PmbA protein, partial [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
Length = 226
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 112/229 (48%), Positives = 163/229 (71%), Gaps = 4/229 (1%)
Query: 231 AAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIF 290
A+RT+SRL +K+ST K PV+F +A L I+G ++YRKSTFL+DSLGK+I
Sbjct: 2 CARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYRKSTFLLDSLGKQIL 61
Query: 291 SSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNS 350
+ I E PH+L SS FD+EGV+T++R +VK+G++ + L+ YSA+KLG+K+TG++
Sbjct: 62 PEWLIIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTNYSARKLGLKSTGHA 121
Query: 351 GGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGK 410
GG H+ I N +++LK+M TGL+VTELMG G++ ITGDYS+GA G+W+ENG+
Sbjct: 122 GGIHNWRIAGQGL----NFEQLLKEMGTGLVVTELMGQGVSGITGDYSRGAAGFWVENGE 177
Query: 411 IQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
IQY V EITI+G L+ M++ IV +G D+ TR++ GS+L+ M IAG+
Sbjct: 178 IQYPVSEITIAGNLKEMWRNIVTVGDDIETRSNIQCGSVLLPEMKIAGQ 226
>gi|398910372|ref|ZP_10655001.1| putative Zn-dependent protease-like protein, partial [Pseudomonas
sp. GM49]
gi|398185872|gb|EJM73260.1| putative Zn-dependent protease-like protein, partial [Pseudomonas
sp. GM49]
Length = 228
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 162/231 (70%), Gaps = 4/231 (1%)
Query: 228 GFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGK 287
G AA+R SRL A+ + T + PVLF A LA L F ISG SLYRKS+FL +LG+
Sbjct: 1 GQRAAQRAASRLGARPVPTCEVPVLFSAELAGGLFGSFLSAISGGSLYRKSSFLEGTLGQ 60
Query: 288 KIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTT 347
K+F + I E PH++ + GS++FD +G+ T + V+ G + Y L TYS +KLGM +T
Sbjct: 61 KLFPEWLTIDERPHLMRALGSAAFDGDGLATYAKPFVEKGELVSYILGTYSGRKLGMPST 120
Query: 348 GNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIE 407
N+GG H+L + + ++ +L++M GLLVTELMG G+N +TGDYS+GA GYW+E
Sbjct: 121 ANAGGVHNLFV----SHGDEDQAALLRRMGRGLLVTELMGQGLNMVTGDYSRGAAGYWVE 176
Query: 408 NGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
NG+IQ++V+E+TI+G +++MFKQIVA+G+D+ R++ +GS+LIE M +AG
Sbjct: 177 NGEIQFAVQEVTIAGNMRDMFKQIVAVGNDLELRSNIRTGSVLIERMTVAG 227
>gi|417338412|ref|ZP_12120251.1| TldE/PmbA protein [Salmonella enterica subsp. enterica serovar
Alachua str. R6-377]
gi|353561512|gb|EHC28429.1| TldE/PmbA protein [Salmonella enterica subsp. enterica serovar
Alachua str. R6-377]
Length = 372
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 204/344 (59%), Gaps = 6/344 (1%)
Query: 37 SSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96
+ + ++ G SV R G+++ +E N+D + + +Y Q+ K G++S++D +++
Sbjct: 32 AEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRK----GSASSTDLSPQAIAR 87
Query: 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNF 156
T+ AA +IAR+T+ D AG+ D+ L + D L+ P ++ D+A +A R E +
Sbjct: 88 TVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVTPDEAIELAARAEQASLKA 147
Query: 157 NSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNS 216
+ I N E + + NSHG + GY ++H +S IA + +M+RD Y+
Sbjct: 148 DKRITNTEGGSFNSHYGIKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGR 207
Query: 217 DPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYR 276
L PE +G A+RT+SRL +K+ST K PV+F +A L I+G ++YR
Sbjct: 208 AMADLQAPEWVGAECARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGAVYR 267
Query: 277 KSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLST 336
KSTFL+DSLGK+I + I E PH+L SS FD+EGV+T++R +VK+G++ + L+
Sbjct: 268 KSTFLLDSLGKQILPEWLTIEEHPHLLKGLASSPFDSEGVRTERRDIVKDGVLTQWLLTN 327
Query: 337 YSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGL 380
YSA+KLG+K+TG++GG H+ I+ + + + L ++LK+M TGL
Sbjct: 328 YSARKLGLKSTGHAGGIHNW-RIAGQGLNFEQL-QLLKEMGTGL 369
>gi|399154808|ref|ZP_10754875.1| peptide maturation protein PmbA [gamma proteobacterium SCGC
AAA007-O20]
Length = 412
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 214/385 (55%), Gaps = 10/385 (2%)
Query: 40 EFNEG--NGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDT 97
EF+ G +G S VR +++ ++ + D + +VI+YI K G +++ D KKSL +
Sbjct: 24 EFSVGKSSGVSTSVRLSEVETLKYHLDASFDVIVYIGKNK----GQATSVDLSKKSLNNA 79
Query: 98 INAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFN 157
I +A IA++T D F GL + + D +LY PW L + IA CE A
Sbjct: 80 IESACLIAKYTQEDPFNGLAPSDRMAWQAPDLELYHPWNLDAKKSIDIAMECEQIALE-Q 138
Query: 158 SLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSD 217
I N++ +++ + + ANS G ++ +KH + S IA + EMQ Y D
Sbjct: 139 PEIDNSDGAELSSFEGESIYANSTGLIAKLRNTKHTLFCSLIAKRNDEMQTAYEYGIALD 198
Query: 218 PKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRK 277
L +G AAK +L ++ ++ +KCP++F + L + +SG+ Y+K
Sbjct: 199 ANNLTSATQVGLGAAKLAQEKLGSRHLNPQKCPIIFTPRQSSGLFSQLLGSLSGSRQYKK 258
Query: 278 STFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTY 337
++FL+DSLGK I + I EDP + + G+ +FD +GV +K+ ++NG + Y + Y
Sbjct: 259 TSFLLDSLGKVILPKTLSIYEDPLQVKTLGARAFDQDGVLKKKQFFIENGRVSSYIMGQY 318
Query: 338 SAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDY 397
SA +LG+++T N+GG + I +N L E+ K M GL+VT+LMG GIN TG+Y
Sbjct: 319 SANQLGLESTANAGGVSNCCIDTN---FDGGLAELTKDMGRGLIVTDLMGHGINITTGNY 375
Query: 398 SKGAFGYWIENGKIQYSVEEITISG 422
S+GA G+W+ENG+IQY V ITI+G
Sbjct: 376 SRGASGFWVENGEIQYPVSGITIAG 400
>gi|392383113|ref|YP_005032310.1| putative Zn-dependent protease, pmbA-like protein [Azospirillum
brasilense Sp245]
gi|356878078|emb|CCC98942.1| putative Zn-dependent protease, pmbA-like protein [Azospirillum
brasilense Sp245]
Length = 451
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 149/455 (32%), Positives = 236/455 (51%), Gaps = 21/455 (4%)
Query: 14 SKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYI 73
S+ + L D++ AK GA + + S+ R GK + +E++ ++ + ++I
Sbjct: 7 SQPDVLNLLDDLIRKAKGAGADSADAVLFDSASLSLSQRFGKTEKLERSESGDLGLRVFI 66
Query: 74 QDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYT 133
GK+ S++D K+L + + A +AR D F GL D + D +
Sbjct: 67 --GKRQAI--VSSTDRSAKALDELVERAVAMARVVPEDPFCGLADPEQIYTTLPDLDVCD 122
Query: 134 PWFLSIDDAKLIAYRCE--NEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSK 191
P S A+L+ R EA + N+E +S +A S+GF Y S+
Sbjct: 123 P---SEPSAELLIERARIAEEAALAVEGVTNSEGADAGWSRSTIAIAASNGFTGRYGVSR 179
Query: 192 HIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPV 251
+S S +A G M+RD Y S L P IG A +R I RL +++ + K PV
Sbjct: 180 QSLSASVLAGTGTGMERDYDYDSKVYGSDLRDPASIGREAGERAIRRLNPRRVKSCKVPV 239
Query: 252 LFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSF 311
+F+ ++ LL ISG S+ R ++FL D +G++IF++ I I++DPH+ S F
Sbjct: 240 VFDPRVSRGLLGHLTGSISGPSIARGTSFLKDKMGQRIFAAGITIVDDPHVKRGLRSRPF 299
Query: 312 DNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNS--------GGAHHLIIISNKT 363
D EGV T +R ++++G + + L SA++LG+ TTG++ G A + ++
Sbjct: 300 DAEGVATTRRNLIEDGHLTTWLLDLRSARQLGLSTTGHAARGTSGPPGPAPANVYMAPGA 359
Query: 364 KSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGK 423
KS D E+L ++ G VTELMG G+N +TGDYS+GA GYWIENG+I Y V E+TI+G
Sbjct: 360 KSRD---ELLAEIPNGFYVTELMGTGVNGVTGDYSRGAAGYWIENGQIAYPVTELTIAGN 416
Query: 424 LQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
L+ MF + SD+ R + +I I+ + IAG
Sbjct: 417 LKEMFLNLEP-ASDLELRFGMDAPTIRIDGLTIAG 450
>gi|407784278|ref|ZP_11131454.1| putative peptidase, PmbA-like protein [Oceanibaculum indicum P24]
gi|407197402|gb|EKE67464.1| putative peptidase, PmbA-like protein [Oceanibaculum indicum P24]
Length = 448
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 141/426 (33%), Positives = 233/426 (54%), Gaps = 21/426 (4%)
Query: 43 EGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAY 102
EG S R GK++ IE+ K++ + ++I G++ S++DF K +L++ + A
Sbjct: 33 EGESLSHGQRLGKLEKIERAEGKDLGLRVFI--GQR--SATVSSTDFKKDALHEAVERAI 88
Query: 103 NIARFTASDNFAGLPDENTL-----EMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFN 157
+A+ D +AG+ + L E++ LD TP L+ + A I EA
Sbjct: 89 AMAKLALEDKYAGIAGADQLARSWPEIDMLDPAEPTPEQLA-ERAGAI-----EEAALAV 142
Query: 158 SLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSD 217
S + N+E + +S L S GF Y S +S+S IA + EM+ D Y+S
Sbjct: 143 SGVSNSEGAEASWGRSTVTLVTSAGFAGRYARSSQGVSVSVIAARDGEMETDYDYTSAVY 202
Query: 218 PKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRK 277
L+ P ++G A +RT+ +L +K T + PV+FE +A L+ ISG S+ R
Sbjct: 203 AGDLEDPALVGRRAGERTVRKLGPRKAKTAQVPVVFEPRMARSLVGHLLGAISGASVARG 262
Query: 278 STFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTY 337
++FL D +G++IF+ I I++DPH S FD EG+ KR ++++G++ + L
Sbjct: 263 TSFLKDRMGQRIFAPGIMIVDDPHRPRGMRSKPFDGEGLANGKRNLIEDGVLTTWLLDLA 322
Query: 338 SAKKLGMKTTGNSG---GAHHLIIISNKTKSSDNL--KEMLKKMNTGLLVTELMGDGINY 392
SA++LG+++TG++ G SN ++ NL +E++ + G VTE+MG G N
Sbjct: 323 SARQLGLQSTGHAARGTGGPPSPSSSNTHLAAGNLSPEELIADIEQGFYVTEMMGSGANM 382
Query: 393 ITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIE 452
+TGDYS+GA GYWIE G+I Y V E+TI+G L++MF ++ SD+ + S + ++ I+
Sbjct: 383 VTGDYSRGAAGYWIEKGQIAYPVSEVTIAGNLKDMFAKLTP-ASDLEFKGSTDAPTVRID 441
Query: 453 NMIIAG 458
M +AG
Sbjct: 442 GMTVAG 447
>gi|426401399|ref|YP_007020371.1| modulator of DNA gyrase family protein [Candidatus Endolissoclinum
patella L2]
gi|425858067|gb|AFX99103.1| modulator of DNA gyrase family protein [Candidatus Endolissoclinum
patella L2]
Length = 448
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 148/454 (32%), Positives = 235/454 (51%), Gaps = 27/454 (5%)
Query: 19 QQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKK 78
L D+LN AKKIGA + + SV R G + IE++ D + G +
Sbjct: 7 HDLLADILNQAKKIGADAADTILVQEISQSVSQRLGNTEAIERSEDCKL--------GLR 58
Query: 79 MFYGNS----STSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
+F GN ST+DF K L + I A +A+ +++AGL D + +++
Sbjct: 59 VFVGNRQAAVSTTDFKKNVLNNMIERAIAMAKVAPENSYAGLADPTQIARKWPYIEMFDK 118
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHII 194
LS+D+ A E+ A S I N+E S ++ ++GF+ Y S + +
Sbjct: 119 TELSVDNLIERAQSAEDAALAV-SGITNSEGAEARFTVSEVTMSATNGFIGAYKQSSYSL 177
Query: 195 SISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254
++ IA M+RD Y++ + LD+P +G A +RT+ RL + + T + PV+ E
Sbjct: 178 GVAVIAGTDCTMERDYDYTAKVFDEDLDKPADVGRQAGERTVRRLNPRPVKTCRVPVVIE 237
Query: 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNE 314
A +LN FA ISG ++ R ++FL S+ ++F +I+I+++PH F S FD E
Sbjct: 238 PRAARSMLNYFASAISGLAIARGTSFLKYSMNNQLFPENIRIMDEPHRPRGFRSKPFDAE 297
Query: 315 GVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNL----- 369
G+ T R VV NG + + L +A++LG+ +T N+ + SN S N
Sbjct: 298 GLATSPRAVVDNGRLTSWILDLTTARQLGLDSTANAVRSTS----SNPEPSVSNFYMIPG 353
Query: 370 ----KEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQ 425
K+++ ++ GL +T+LMG +N ITGDYS+ A GYWI NG+I Y V EITI G L+
Sbjct: 354 KLSPKQLINEVEQGLFITDLMGTSVNLITGDYSQAAVGYWINNGEITYPVSEITIGGHLE 413
Query: 426 NMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
MF IVA +D++ + +I I+ + +AGK
Sbjct: 414 KMFASIVA-ANDLMFQYGTDCPTIRIDGLTVAGK 446
>gi|307941679|ref|ZP_07657034.1| protein PmbA [Roseibium sp. TrichSKD4]
gi|307775287|gb|EFO34493.1| protein PmbA [Roseibium sp. TrichSKD4]
Length = 447
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 137/449 (30%), Positives = 248/449 (55%), Gaps = 26/449 (5%)
Query: 22 AQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFY 81
A+ ++ A+K+GA + G +V VR GK++ E+ ++ V +++ GK+
Sbjct: 14 AEQLVETARKLGADACDVIAVTGTSLAVEVRDGKVEETERAEGGDVTVRVFV--GKR--- 68
Query: 82 GNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTL--EMNPLDFKLYTPWFLSI 139
N++ S + + A +A+ D +AGL D++ L E+ L+ T +
Sbjct: 69 -NAAVSANALQDPEALVERAVAMAKVAPEDPYAGLADQDRLLKELPALELLDET----EV 123
Query: 140 DDAKLIAYRCENEAFNFN-SLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISP 198
+L + E EA S + + + + S +LA SHGF Y S+H +S++
Sbjct: 124 SATELTEWAKEAEAAGLAVSGVSKSGGASASWRLSGAVLATSHGFSGAYVASRHGLSMTA 183
Query: 199 IAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLA 258
+A +G M+RD + + + ++ P +IG A +RT+ RL +K+ T V++E+ A
Sbjct: 184 VAGEGTSMERDYDFDYRTFLEDMESPAVIGRRAGERTVRRLNPRKVETGTVNVIYESRAA 243
Query: 259 FELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKT 318
L++ F+ ++G S+ RK++FL + +G+++F+ I+I +DP + FD EG
Sbjct: 244 KSLVSHFSSAVNGASVARKTSFLKNKMGERLFAPGIRITDDPRKRRGAATRPFDGEGTAA 303
Query: 319 QKRLVVKNGIIQGYFLSTYSAKKLGMKT--------TGNSGGAHHLIIISNKTKSSDNLK 370
+ ++++G++Q +FL T +AK+LG+ G S G+ +L + + +++
Sbjct: 304 EFLQMIEDGVLQNWFLDTAAAKELGLTPNGRAQRSGAGTSPGSTNLTLEPGQK----SVE 359
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
+M+ + GLLVT+L+G G+N +TGDYS+GA G+W ENG+I + V EITI+G L +MF +
Sbjct: 360 QMMAETGRGLLVTDLIGHGVNAVTGDYSRGAAGFWYENGEIVHPVSEITIAGNLIDMFAR 419
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAGK 459
+V +D+ R S + SILIE+M +AG+
Sbjct: 420 LVP-ANDLDARYSVAAPSILIEDMALAGE 447
>gi|330813638|ref|YP_004357877.1| tldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Candidatus Pelagibacter sp. IMCC9063]
gi|327486733|gb|AEA81138.1| tldE/PmbA protein, part of proposed TldE/TldD proteolytic complex
[Candidatus Pelagibacter sp. IMCC9063]
Length = 439
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 251/451 (55%), Gaps = 14/451 (3%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
I K+ ++++Q L+ AKK+GA+ I S+ R +++ +++++ ++ +
Sbjct: 1 MIKDKAFLEKISQFCLDKAKKLGATDCEIAVGNSISESISYRNKQVEQSDRSDNFSIGLT 60
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
YI D KK N S+S+ K +++ I + + T D ++ +P E+ L +
Sbjct: 61 TYI-DNKK---SNVSSSNIKKDDIFELIERCIAMTKITPEDKYSSMPKESFLATKDISLN 116
Query: 131 LYTPWFLSIDDAKLIAY--RCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYP 188
L+ + +D+ I + E EAF+ NS I N+ + +S+F+L NS GF GY
Sbjct: 117 LFDK--IELDNNYKINFLQEMEEEAFS-NSKITNSNGCSFSEAKSNFILTNSLGFSKGYE 173
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
S + +A M+ D YS+ +L + IG AA R + RL AKKI + K
Sbjct: 174 TSMFSAGCAVVAEDKGLMETDYEYSTKRFSNELLNSKKIGSSAANRAVRRLNAKKIESTK 233
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
PV+F+ ++ LL+ FA ISG++ R +TFL + L +++FSS I + +DP I GS
Sbjct: 234 IPVIFDKRISKSLLSSFASAISGSAFSRGTTFLKNKLKEEVFSSSINVFDDPLIQKGLGS 293
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDN 368
FD+EGV + K +V+NG +Q FL TY++ LG++T G SGG+ +L + K +
Sbjct: 294 QPFDSEGVTSNKLSLVENGKLQNIFLDTYNSNILGVETNGRSGGSTNLYFENGK----NT 349
Query: 369 LKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMF 428
LKE+++ L +T+L+G G + ITGDYS GA G IENG++ Y+V EITI+G L +M+
Sbjct: 350 LKEIIQAQKKTLYITDLIGRGSDTITGDYSVGASGILIENGELGYAVNEITIAGNLLDMY 409
Query: 429 KQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
K + + +D+ + + SI+I M IAGK
Sbjct: 410 KNL-DLANDLEFTYTTNAPSIIINQMTIAGK 439
>gi|389878686|ref|YP_006372251.1| Peptidase U62, modulator of DNA gyrase [Tistrella mobilis
KA081020-065]
gi|388529470|gb|AFK54667.1| Peptidase U62, modulator of DNA gyrase [Tistrella mobilis
KA081020-065]
Length = 455
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 138/448 (30%), Positives = 230/448 (51%), Gaps = 21/448 (4%)
Query: 21 LAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMF 80
L +D++ AK+ GA + E SV R GKI+ + +++ ++ + + + G++
Sbjct: 18 LLEDLIARAKRAGADQADALMVESRALSVQRRLGKIEELTRSDGGDLGLRVLV--GRRQA 75
Query: 81 YGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSID 140
ST+D SL A +A D FAGL + + ++Y P S +
Sbjct: 76 I--VSTADLRPGSLDALAERAVAMANVVPEDRFAGLAEPGEIAREIPALEIYDPTEFSAE 133
Query: 141 DAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIA 200
D A CE A + N+E G + S LA S+GF Y S+ + S IA
Sbjct: 134 DLLAWAETCEEAARGVEG-VTNSEGAGASQSHSMIALAASNGFRGAYRTSRFTVGASVIA 192
Query: 201 IKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFE 260
+G M R + Y+S +D IG A +RT++RL ++ T + PV+F+ ++
Sbjct: 193 GEGLNMVRGHEYTSKRFVADMDDLATIGRIAGERTVARLNPRRPKTARVPVVFDRRVSRM 252
Query: 261 LLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQK 320
L+ A ++G ++ R ++FL D +G++I II+DP + S FD EG+
Sbjct: 253 LVAAIASAVNGAAVTRGTSFLKDRMGERIACDAFTIIDDPFRERAPASHPFDGEGIAGAP 312
Query: 321 RLVVKNGIIQGYFLSTYSAKKLGMKTTGNSG-GAHHLIIISNKTKSSDNL---------K 370
VV+ G+++ + L SA++LG+K+TG++ GA S + +S NL
Sbjct: 313 LTVVEGGVLKSWLLDCRSARQLGLKSTGHAARGAG-----SAPSPASSNLYLAPGTLSRD 367
Query: 371 EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQ 430
E++ K+ TGLLV E MG G+N +TGD+S+G G+WIENG+I Y V EIT++G++Q+M
Sbjct: 368 ELIAKIGTGLLVDETMGSGVNVVTGDFSQGVAGFWIENGEIAYPVNEITVAGRIQDMLMS 427
Query: 431 IVAIGSDVLTRNSNTSGSILIENMIIAG 458
V SD+ R+ + ++ + + +AG
Sbjct: 428 -VEPASDLEFRSGTDAPTLAVGGLTVAG 454
>gi|325917600|ref|ZP_08179798.1| putative Zn-dependent protease-like protein [Xanthomonas
vesicatoria ATCC 35937]
gi|325536186|gb|EGD07984.1| putative Zn-dependent protease-like protein [Xanthomonas
vesicatoria ATCC 35937]
Length = 252
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 115/253 (45%), Positives = 170/253 (67%), Gaps = 4/253 (1%)
Query: 206 MQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIF 265
MQRD WYSS + L+ P+ IG +AA RT++RL + + T PVLF +A L+
Sbjct: 2 MQRDGWYSSALAREDLEAPDAIGRHAAARTLARLAPRSLPTGPLPVLFAPEVARSLVGHL 61
Query: 266 ARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVK 325
+SG +LYR+++FL+DS+G K+F I E PH+ S++FD EGV T++ ++
Sbjct: 62 LGAVSGGALYRRASFLLDSVGTKLFPDWFNIEELPHLRRGLRSAAFDGEGVATRRSALIT 121
Query: 326 NGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTEL 385
+G++Q Y L +YSA+KLG++TT N+GG H+L + +N + +L M+ M+ GLLVTEL
Sbjct: 122 DGVLQRYVLGSYSARKLGLQTTANAGGVHNLQVSAN----AGDLASMIAGMSRGLLVTEL 177
Query: 386 MGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNT 445
MG+G+N +TGDYS+GA G+WIENG I Y V+ +TI+G L++MF I A+GSDV R+
Sbjct: 178 MGNGVNPVTGDYSRGAGGFWIENGAIAYPVDGLTIAGNLRDMFAGIEAVGSDVDPRSHVK 237
Query: 446 SGSILIENMIIAG 458
GS+L+ M +AG
Sbjct: 238 IGSVLVNRMTVAG 250
>gi|374329883|ref|YP_005080067.1| C69 family peptidase [Pseudovibrio sp. FO-BEG1]
gi|359342671|gb|AEV36045.1| Peptidase U62, modulator of DNA gyrase [Pseudovibrio sp. FO-BEG1]
Length = 447
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 139/423 (32%), Positives = 229/423 (54%), Gaps = 20/423 (4%)
Query: 44 GNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYN 103
G SV VR+GK++ ++ ++ + +++ GK++ +S+ SD + A
Sbjct: 36 GMSLSVSVREGKVENTDRAEGNDVTLRVFV--GKQVASISSNASD----DPAELAARAVE 89
Query: 104 IARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNN 163
+A+ T D +AGL + L L P +S D+ A E A + +
Sbjct: 90 MAKVTPEDPYAGLAEPERLLKEIPQLDLIDPREVSPDELTKTALDAEAAALTVEG-VSKS 148
Query: 164 ENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQ 223
G + S +LA SHGF+ Y S+ S++ IA +G M+RD + S + L
Sbjct: 149 GGAGASWGLSGIVLATSHGFVGAYQRSRSGFSMTAIAGEGTGMERDYEFDSRTYWDDLMS 208
Query: 224 PEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVD 283
E +G A +RT+ RL +++ TRK PV++E A LL FA I+G S+ R ++FL D
Sbjct: 209 AEEVGRIAGERTVRRLNPRQLETRKAPVVYEPRTARSLLGHFAGAINGASIARGTSFLKD 268
Query: 284 SLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLG 343
+G+++FS I I +DP G++ FD EG + ++++GI+ +FL Y+A++LG
Sbjct: 269 KMGQQVFSKGITISDDPFKARGGGTAPFDAEGTGAEYLNMIEDGILGHWFLDGYAARELG 328
Query: 344 MKTTG--------NSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITG 395
+ + G S GA +L + + + +E+L+ + GLLVT+L+G G N +TG
Sbjct: 329 LTSNGRARRSGSSTSPGATNLTLQAGEKTP----EEILRDIGEGLLVTDLIGHGANGVTG 384
Query: 396 DYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMI 455
DYS+GA GYW+ENG+I Y V EITI+G L++MF + SD+ R + + +++IE +
Sbjct: 385 DYSRGASGYWVENGEIAYPVSEITIAGNLKDMFLNLTP-ASDLDERYAVATPTVVIEGLT 443
Query: 456 IAG 458
IAG
Sbjct: 444 IAG 446
>gi|86136909|ref|ZP_01055487.1| PmbA [Roseobacter sp. MED193]
gi|85826233|gb|EAQ46430.1| PmbA [Roseobacter sp. MED193]
Length = 448
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 147/447 (32%), Positives = 233/447 (52%), Gaps = 12/447 (2%)
Query: 19 QQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKK 78
+ L +++ AK+ GA+ EG S+ VR+G ++ E++ ++ + ++I G++
Sbjct: 6 EALCHALIDAAKRAGANAVDAMATEGRSLSIEVREGNLEHAERSEGTDLGLRVFI--GQR 63
Query: 79 MFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMN-PLD-FKLYTPWF 136
S+SD ++L A +AR D ++GL L N LD +L P
Sbjct: 64 Q--AQVSSSDSRPETLLAMAERAVAMAREAPEDPYSGLASAEQLAQNWDLDALQLCDPSP 121
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISI 196
+A A I + G + LA S+GF GY + +S
Sbjct: 122 EPAPEALQQDALAAEAACADIDGISQVQAAGASYGHHSVYLATSNGFAGGYQRTGRSLSC 181
Query: 197 SPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAP 256
+ IA G M+RD S + L PE IG A +RT++RL A++ T PVLF+
Sbjct: 182 TGIAGTGTGMERDYDGDSRTFQSDLRSPEDIGRLAGERTVARLNARRPQTGSYPVLFDER 241
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
++ L+ +G ++ R S++L ++G++I + +IEDPH GS FD EG+
Sbjct: 242 VSSSLIGHLLSASNGAAIARGSSWLQGAVGEQILPQSLSVIEDPHRARISGSRPFDGEGL 301
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNS-GGAHHLIIISN----KTKSSDNLKE 371
TQ+R +++NG++ G+ L SA+KLG+++TGN+ G + SN T+ + E
Sbjct: 302 ATQQRSIIENGVLTGWTLDLASARKLGLQSTGNAVRGVGSVPTPSNWNVALTQGHQSRAE 361
Query: 372 MLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQI 431
++ +M TGLLVT L+G IN TGDYS+GA GYW+ENG+I Y V E TI+G L++M K +
Sbjct: 362 LIAEMGTGLLVTSLIGSTINPNTGDYSRGASGYWVENGEIAYPVNECTIAGNLRDMLKTL 421
Query: 432 VAIGSDVLTRNSNTSGSILIENMIIAG 458
V +D T S S+L+E M +AG
Sbjct: 422 VP-ANDARTYLSRVVPSLLVEGMTLAG 447
>gi|262196529|ref|YP_003267738.1| peptidase U62 modulator of DNA gyrase [Haliangium ochraceum DSM
14365]
gi|262079876|gb|ACY15845.1| peptidase U62 modulator of DNA gyrase [Haliangium ochraceum DSM
14365]
Length = 453
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/456 (29%), Positives = 235/456 (51%), Gaps = 22/456 (4%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
+ +A + AKK GA + + +G + VR G+ +++++ + + + I+
Sbjct: 7 DLCDIAAKAVELAKKHGADDAEVVVRDGAELTAKVRLGQPELVQEAGSRALGLRIF---- 62
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K + + TSD + L I + +A + D F LPD L L+
Sbjct: 63 KDLRSAVTYTSDLRAEPLDAFIAESVTLAELSEPDEFNRLPDAADLAKEVPALDLWDESC 122
Query: 137 LSIDDAKLIAYRC---ENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHI 193
LSID A+ + RC E A +F+ + N++ + A+S GF+ GY +
Sbjct: 123 LSIDAAEAL-RRCQRGEKAALDFDPRVGNSDGASFSRVLGASAFASSGGFVGGYRGTYAS 181
Query: 194 ISISPIAIKGKEMQRDN-WYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252
+ P+ +R+ W+++ L PE +G AA+RT++ L ++KI T + PV+
Sbjct: 182 FYVEPLCDDADNKKRNGYWWTAGRFLDTLADPEEVGREAARRTVATLGSRKIETCEVPVI 241
Query: 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFD 312
F+ + ++ + +G+S+YRKST+L+D G I S + I++DP I + GS +FD
Sbjct: 242 FDPEVGRSIVGTVFSVSNGSSMYRKSTYLLDREGTPIASPLVTIVDDPLIPRAPGSRAFD 301
Query: 313 NEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSG---------GAHHLIIISNKT 363
+G+ T++ +VV+ G+++ TYSA+KLG +TG++G +LI+ +T
Sbjct: 302 GDGLPTRRNVVVERGVLETVLCDTYSARKLGRASTGSAGRGVGGTPGPTTSNLIMQPGET 361
Query: 364 KSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGK 423
+ ++ K GL VT +MG G N ITGD+S+GA G+WIENG++ + V EIT+S
Sbjct: 362 ----DRDALIAKTERGLYVTSMMGFGFNPITGDFSRGAQGFWIENGELGFPVSEITVSCN 417
Query: 424 LQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459
++ ++I + SD+ R S + + M IAG+
Sbjct: 418 FDDLLQRIDHVCSDLDQRASTACPTFRVSRMTIAGR 453
>gi|427409507|ref|ZP_18899709.1| hypothetical protein HMPREF9718_02183 [Sphingobium yanoikuyae ATCC
51230]
gi|425711640|gb|EKU74655.1| hypothetical protein HMPREF9718_02183 [Sphingobium yanoikuyae ATCC
51230]
Length = 448
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 246/456 (53%), Gaps = 18/456 (3%)
Query: 12 IYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVII 71
+ S E Q AQD++ A+K GA + + +V VR G ++ +E++ + + + +
Sbjct: 1 MLSLEEAQSRAQDLVTAARKAGADAADAIYACNASTTVAVRLGALEDVERSEGEEIGLRV 60
Query: 72 YIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGL-PDENTLEMNPLDFK 130
+I G++ + S SD +L I+ + +AR D +AGL P++ L
Sbjct: 61 FI--GQR--SASISASDMNPATLATLIDRSIAMAREAPEDPYAGLAPEDRLLRKRAPSLD 116
Query: 131 LY---TPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
L P ++ + LIA EA I N+E G + +S LA SHGF Y
Sbjct: 117 LVDEEEPEPAALRERALIA----EEAARSIPGITNSEGGGAASGRSQVALATSHGFAGAY 172
Query: 188 PFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTR 247
+ H S +A G +MQRD+ ++ K LD E +G A +R ++RL K+ +
Sbjct: 173 AATNHSTWASVLAGSGADMQRDHASHASRHLKDLDDAEAVGIRAGQRAVARLNPGKVESG 232
Query: 248 KCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFG 307
PV+F+ + L+ + G ++ R+S+FL+DSLG+ +F S I +I+DP +L
Sbjct: 233 VMPVIFDPRIGSSLVGHLIGGMVGPAIARRSSFLLDSLGETLFDSKITVIDDPLLLRGLR 292
Query: 308 SSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSG---GAHHLIIISNKTK 364
S FD EG+ ++R ++++G++ G+ + + SA++LG++ TG++ I+N
Sbjct: 293 SRPFDGEGLPVERRALIEDGVLTGWLMDSASARQLGLEPTGHASRGGAGAPGAGITNVHM 352
Query: 365 SSDNLK--EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISG 422
+ +L E++ + G+ VTEL+G G+N +TGDYS+GA G+ IENG + +V EITI+G
Sbjct: 353 EAGSLSVGELMADVKRGIYVTELIGMGVNGVTGDYSRGAAGFLIENGAVGPAVSEITIAG 412
Query: 423 KLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
L++MF+ +V +D++ R + ++ ++ M +AG
Sbjct: 413 NLKDMFRTLVP-ANDLMFRYAMNVPTLRVDGMTVAG 447
>gi|398383088|ref|ZP_10541163.1| putative Zn-dependent protease-like protein [Sphingobium sp. AP49]
gi|397725348|gb|EJK85800.1| putative Zn-dependent protease-like protein [Sphingobium sp. AP49]
Length = 448
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 245/456 (53%), Gaps = 18/456 (3%)
Query: 12 IYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVII 71
+ S E Q AQD++ A+K GA + + +V VR G ++ +E++ + + + +
Sbjct: 1 MLSLEEAQSRAQDLVTAARKAGADAADAIYACNASTTVAVRLGALEDVERSEGEEIGLRV 60
Query: 72 YIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGL-PDENTLEMNPLDFK 130
+I G++ + S SD +L I+ + +AR D +AGL P++ L P
Sbjct: 61 FI--GQR--SASISASDMNPATLATLIDRSIAMAREAPEDPYAGLAPEDRLLRKRPPALD 116
Query: 131 LY---TPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
L P ++ + L+A EA I N+E G + +S LA SHGF Y
Sbjct: 117 LVDEEEPEPAALRERALVA----EEAARSIPGITNSEGGGAASGRSQVALATSHGFAGAY 172
Query: 188 PFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTR 247
+ H S +A G +MQRD+ ++ + LD E +G A +R ++RL K+ +
Sbjct: 173 AATNHSTWASVLAGSGADMQRDHASHASRHLQDLDNAEAVGMRAGQRAVARLNPGKVDSG 232
Query: 248 KCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFG 307
PV+F+ + L+ + G ++ R+S+FL+DSLG+ +F S I II+DP +L
Sbjct: 233 VMPVIFDPRIGSSLVGHLIGGMVGPAIARRSSFLLDSLGETLFDSKITIIDDPLLLRGLR 292
Query: 308 SSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSG---GAHHLIIISNKTK 364
S FD EG+ +R +++ G++ G+ + + SA++LG++ TG++ I+N
Sbjct: 293 SRPFDGEGLPVARRALIEEGVLTGWLMESASARQLGLEPTGHASRGGAGAPGAGITNVHM 352
Query: 365 SSDNLK--EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISG 422
+ +L +++ + G+ VTEL+G G+N +TGDYS+GA G+ IENG + +V EITI+G
Sbjct: 353 EAGSLSVGDLMADVKRGIYVTELIGMGVNGVTGDYSRGAAGFLIENGAVGPAVSEITIAG 412
Query: 423 KLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
L++MF+ +V +D++ R + ++ I+ M +AG
Sbjct: 413 NLKDMFRTLVP-ANDLMFRYAMNVPTLRIDGMTVAG 447
>gi|381201297|ref|ZP_09908425.1| putative Zn-dependent protease PmbA [Sphingobium yanoikuyae
XLDN2-5]
Length = 448
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 245/456 (53%), Gaps = 18/456 (3%)
Query: 12 IYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVII 71
+ S E Q AQD++ A+K GA + + +V VR G ++ +E++ + + + +
Sbjct: 1 MLSLEEAQSRAQDLVTAARKAGADAADAIYACNASTTVAVRLGALEDVERSEGEEIGLRV 60
Query: 72 YIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGL-PDENTLEMNPLDFK 130
+I G++ + S SD +L I+ + +AR D +AGL P++ L
Sbjct: 61 FI--GQR--SASISASDMNPATLATLIDRSIAMAREAPEDPYAGLAPEDRLLRKRAPSLD 116
Query: 131 LY---TPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGY 187
L P ++ + LIA EA I N+E G + +S LA SHGF Y
Sbjct: 117 LVDDEEPEPAALRERALIA----EEAARSIPGITNSEGGGAASGRSQVALATSHGFAGAY 172
Query: 188 PFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTR 247
+ H S +A G +MQRD+ ++ K LD E +G A +R ++RL K+ +
Sbjct: 173 AATNHSTWASVLAGSGADMQRDHASHASRHLKDLDDAEAVGMRAGQRAVARLNPGKVDSG 232
Query: 248 KCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFG 307
PV+F+ + L+ + G ++ R+S+FL+DSLG+ +F S I II+DP +
Sbjct: 233 VMPVIFDPRIGSSLVGHLIGGMVGPAIARRSSFLLDSLGETLFDSKITIIDDPLLPRGLR 292
Query: 308 SSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSG---GAHHLIIISNKTK 364
S FD EG+ ++R ++++G++ G+ + + SA++LG++ TG++ I+N
Sbjct: 293 SRPFDGEGLPVERRALIEDGVLTGWLMDSASARQLGLEPTGHASRGGAGAPGAGITNVHM 352
Query: 365 SSDNLK--EMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISG 422
+ +L E++ + G+ VTEL+G G+N +TGDYS+GA G+ IENG + +V EITI+G
Sbjct: 353 EAGSLSVGELMADVKRGIYVTELIGMGVNGVTGDYSRGAAGFLIENGAVGPAVSEITIAG 412
Query: 423 KLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
L++MF+ +V +D++ R + ++ ++ M +AG
Sbjct: 413 NLKDMFRTLVP-ANDLMFRYAMNVPTLRVDGMTVAG 447
>gi|167586569|ref|ZP_02378957.1| peptidase U62 modulator of DNA gyrase [Burkholderia ubonensis Bu]
Length = 226
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 144/218 (66%), Gaps = 4/218 (1%)
Query: 11 FIYSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVI 70
F +++ + +++A D+L +AK +GAS ++ E +EG+G SV VR G+++ IE N DK + V
Sbjct: 12 FPHTQDQLKEIASDILRHAKALGASDAATEISEGDGLSVSVRCGEVETIEHNRDKMVGVT 71
Query: 71 IYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFK 130
++I GKK GN+STSDF ++ DT+ AAYNIARFTA D+ AGL + LE P D
Sbjct: 72 VFI--GKKR--GNASTSDFSPAAIKDTVAAAYNIARFTAEDDAAGLAEAELLETAPRDLD 127
Query: 131 LYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFS 190
LY PW LS DDA IA R E+ AF + I N+E V+ Q S F+LA S GF++GYP+S
Sbjct: 128 LYHPWELSADDAVEIARRAEDAAFAVSPQIRNSEGASVSAQHSQFVLATSRGFLAGYPYS 187
Query: 191 KHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIG 228
+H I+ +PIA G+ MQRD+WY+S L PE +G
Sbjct: 188 RHYIACAPIAGSGRHMQRDDWYTSKRSAADLAAPEAVG 225
>gi|418935869|ref|ZP_13489620.1| peptidase U62 modulator of DNA gyrase [Rhizobium sp. PDO1-076]
gi|375057403|gb|EHS53576.1| peptidase U62 modulator of DNA gyrase [Rhizobium sp. PDO1-076]
Length = 448
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 139/451 (30%), Positives = 241/451 (53%), Gaps = 27/451 (5%)
Query: 20 QLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKM 79
Q A+ +++ A+K GA + SV VR GK++ E + + ++ ++
Sbjct: 12 QRAEQLVDLARKAGADRADAVVVRSRSKSVSVRMGKVESTEASESDDFSL--------RV 63
Query: 80 FYGN--SSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
F GN +S S L A +AR + D ++GL DE L N D +LY P +
Sbjct: 64 FIGNQVASVSANPGFDLTALAERAVAMARVSPEDPYSGLADEQDLARNIADLELYDPTEV 123
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISIS 197
S D + A E A + S + N+ G + +L SHGF Y S+ S+
Sbjct: 124 SSDSLRESALAMEEVARSV-SGVSNSLGAGASAGMGGLVLVTSHGFSGSYAASRFSRSVG 182
Query: 198 PIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK-CPVLFEAP 256
IA +G +M+RD+ + S LD E+IG AA+R I RL +++ T V+F+
Sbjct: 183 VIAGEGTKMERDHDFDSRLYYADLDDAEVIGRRAAERAIKRLNPRQVPTASNLTVIFDPR 242
Query: 257 LAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGV 316
+A + A I+G S+ RK++FL D +G+++ + + + +DP + S FD EGV
Sbjct: 243 VARGFVGTIAGAINGASVARKTSFLRDKMGQQVLKAGLNVTDDPLKVRGSSSRPFDGEGV 302
Query: 317 KTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNL------- 369
++ ++++G++Q +FLS+ +A++LG++T G GA +S SS NL
Sbjct: 303 SGERLTMIEDGVLQHWFLSSSAARELGLRTNGR--GARGGTAVS---PSSTNLALEPGDI 357
Query: 370 --KEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNM 427
+++++ + TGL +T+++G G++ ITG+YS+GA G+WIENG++ Y V E+TI+ L++M
Sbjct: 358 SPEDLIRNVGTGLYITDMIGQGVDMITGEYSRGASGFWIENGELTYPVSEVTIASNLKDM 417
Query: 428 FKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
F ++ +D+ + + ++ IE M +AG
Sbjct: 418 FMRVTP-ANDIDRKYGVAAPTLAIEGMTLAG 447
>gi|407976033|ref|ZP_11156935.1| peptidase U62 modulator of DNA gyrase [Nitratireductor indicus
C115]
gi|407428534|gb|EKF41216.1| peptidase U62 modulator of DNA gyrase [Nitratireductor indicus
C115]
Length = 448
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 143/445 (32%), Positives = 236/445 (53%), Gaps = 23/445 (5%)
Query: 25 MLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNS 84
++ A++ GA+ + SV VR GK++ E + +M++ +++ GK++ +
Sbjct: 17 LVEAARRAGANEADAVVVRARSRSVSVRLGKVEGTEASESDDMSLRVFV--GKRV----A 70
Query: 85 STSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKL 144
S S A +AR + D + GL D + L D L+ +S + K
Sbjct: 71 SVSAPSNADPAPLAERAVAMARVSPEDPYQGLADPDRLAAEVRDLDLFDATEVSTEALKE 130
Query: 145 IAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGK 204
A E A + N+ G + +LA S GF+ Y ++ S+S IA +G
Sbjct: 131 AALASEAAALAVEG-VTNSSGAGASAGSGGLVLATSGGFLGQYEATRFSRSVSVIAGEGT 189
Query: 205 EMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNI 264
M+RD +SS LD+PE IG A +R RL A+K++T + PV+F+ +A +
Sbjct: 190 GMERDYDFSSRLHYADLDRPEDIGRRAGERAAGRLNARKVATGRFPVVFDPRVARGIAGH 249
Query: 265 FARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVV 324
A I+G S+ RKS+FL D +GKK+ +S I + +DP L S FD EGV ++ +++
Sbjct: 250 LASAINGASVARKSSFLRDMMGKKVAASGITVTDDPMRLRGQSSRPFDGEGVAGERLVMI 309
Query: 325 KNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNL---------KEMLKK 375
+G++ +FL+T +A++LG+ T G + S+ T +S NL + ++
Sbjct: 310 DDGVLNQWFLATAAARQLGLPGTNGRG----VRASSSVTPASTNLALEAGMAAPETLIGA 365
Query: 376 MNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIG 435
+ +G VTE+ G G+N +TGDYS+GA G+WIENG + Y V E+TI+ L++MF + A
Sbjct: 366 IPSGFYVTEVFGQGVNLVTGDYSRGAAGFWIENGALSYPVSEVTIASNLKDMFLNMTA-- 423
Query: 436 SDVLTRNSNTSG-SILIENMIIAGK 459
++ L RN T+ ++LIE M +AGK
Sbjct: 424 ANDLDRNFGTAAPTLLIEGMTLAGK 448
>gi|209966865|ref|YP_002299780.1| Protein pmbA (Protein tldE) [Rhodospirillum centenum SW]
gi|209960331|gb|ACJ00968.1| Protein pmbA (Protein tldE), putative [Rhodospirillum centenum SW]
Length = 451
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/420 (30%), Positives = 227/420 (54%), Gaps = 17/420 (4%)
Query: 47 FSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYNIAR 106
S+ +R G+ + +E++ ++ + +++ G++M S++D L + A +AR
Sbjct: 40 LSLSMRLGRPESLERSESGDIGLRVFV--GRRMAV--VSSTDRSPAMLRELAERAVAMAR 95
Query: 107 FTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENT 166
D F GL D L + D L + S ++ A R E A + N++
Sbjct: 96 TVPEDPFCGLADPGALAHDWPDLDLCDAYEPSAEELIDAARRVEEAALAVEG-VSNSDGA 154
Query: 167 GVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEI 226
+ +S LA S+GF GY S+ +S+S +A G M+RD Y S L PE
Sbjct: 155 DGSWSRSAVALAASNGFFGGYSVSRRSLSVSVLAGSGTGMERDYDYHSTVYGADLRPPEE 214
Query: 227 IGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLG 286
IG A +R ++RL +K+ +R+ PV+++ +A LL A ISG+++ R ++FL D LG
Sbjct: 215 IGRRAGERAVARLNPRKVRSRQVPVVYDPRVAGGLLGHLAGAISGSAIARGTSFLKDRLG 274
Query: 287 KKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKT 346
+ +F+ I++++DP + S FD EG++ Q+R ++ +G++ + + S+++LG+ +
Sbjct: 275 QPVFAPGIEVVDDPGVRRGLRSKPFDAEGLRPQRRAIIADGVLTTWIMDLRSSRQLGLAS 334
Query: 347 TGNS----GGAHHL----IIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYS 398
TG++ GG + +S T S + L + + G +T LMG G+N +TGDYS
Sbjct: 335 TGHASRGTGGPPSPSPTNLFLSPGTLSPEAL---MADIGEGFYITSLMGQGVNGVTGDYS 391
Query: 399 KGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
+GA G+WIE G+I Y V E+T++G L+ MF+ + SD+ R+ + ++ IE M +AG
Sbjct: 392 RGASGFWIEGGRIAYPVSEVTVAGNLKEMFRNLTPA-SDLELRHGIDAPTVRIEGMTVAG 450
>gi|375337747|ref|ZP_09779091.1| peptidase PmbA [Succinivibrionaceae bacterium WG-1]
Length = 448
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/445 (31%), Positives = 241/445 (54%), Gaps = 11/445 (2%)
Query: 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDG 76
E + +AQ +L+ KK S ++ + G V V G+ + I N + +++ ++
Sbjct: 11 ELENIAQFLLDLCKKKNVDQSEVDIAKSTGLEVSVCNGEPEQINFNKSRVVSLAVF---- 66
Query: 77 KKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWF 136
K G +S+SD + +L T+ AA ++A +T D GL + + +D + P
Sbjct: 67 KNGHTGQASSSDLSEAALIKTVEAAVDMASYTEFDPAQGLGSKELMLDENIDLDMLHPVE 126
Query: 137 LSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFM---SGYPFSKHI 193
+ + A + E + N+ + ++ + Q + ANSH + + FSK+I
Sbjct: 127 PNTNFALKESIDLEKACLSRNNPQIEIKDAAYSNQYGASVYANSHDVLLHSTFSAFSKYI 186
Query: 194 ISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLF 253
IS + GK + SSN + LD + + A +++ + A+KI T PV+F
Sbjct: 187 HVIS--NVNGK-LNHGISVSSNCNNNLLDTNDYMANRAITKSLELVGARKIPTGNFPVIF 243
Query: 254 EAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDN 313
+A + N F ISGNS +RK+T+L D LGK++ I I ++P I G S ++D
Sbjct: 244 RENVAAAVFNSFLSAISGNSQFRKTTYLPDILGKQVMPEFINIYDNPLIKGKLYSCAYDG 303
Query: 314 EGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEML 373
G++T++ ++KNG +Q Y LS Y+A+KLGM+ GN+ G + + +K ++++
Sbjct: 304 NGIRTKEHSLIKNGFVQNYRLSVYTARKLGMQPIGNNYGRTNRFVEDINSKDL-GYEDLI 362
Query: 374 KKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVA 433
KKM+ G+++ LMG G N +TGD+S G G+W+ENG+IQY + E+T++G +++++ I+A
Sbjct: 363 KKMDKGIIIVSLMGQGSNAVTGDFSFGFSGFWVENGEIQYPINEMTVAGNFKDLYQNIIA 422
Query: 434 IGSDVLTRNSNTSGSILIENMIIAG 458
I +D R S GSIL+ N+ IAG
Sbjct: 423 IANDSDPRKSCQVGSILVNNLKIAG 447
>gi|254503072|ref|ZP_05115223.1| TldD/PmbA family [Labrenzia alexandrii DFL-11]
gi|222439143|gb|EEE45822.1| TldD/PmbA family [Labrenzia alexandrii DFL-11]
Length = 447
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 135/423 (31%), Positives = 227/423 (53%), Gaps = 20/423 (4%)
Query: 44 GNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAYN 103
G V VR GK++ E+ ++ + +++ GK+ +++ S + D A
Sbjct: 36 GVSLGVEVRDGKVEETERAEGDDVTLRVFV--GKR----SAAVSANQLDNPSDLAERAVA 89
Query: 104 IARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNN 163
+A+ D FAGL D + L + +L LS D+ IA E + I +
Sbjct: 90 MAKVAPEDPFAGLADPDMLVKQLPELELLDSKQLSADELTNIALEAEAAGLSVEG-ISKS 148
Query: 164 ENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQ 223
+ + + ++A SHGF Y S+ +S++ +A G M+RD + S + + LD
Sbjct: 149 GGASASWRLAGVVMATSHGFQGAYLSSRFGMSMTAVAGDGTAMERDYDFDSRTFFEDLDA 208
Query: 224 PEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVD 283
P IG A +R + RL KISTR V++EA A +L I+G S+ RK++FL+D
Sbjct: 209 PADIGRRAGERAVRRLNPDKISTRTTNVIYEARAARSILGHLVGAINGASVARKTSFLMD 268
Query: 284 SLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLG 343
+G+ + + + +++DP + FD EG + +V++G++Q ++L SA++LG
Sbjct: 269 HMGEAVLAPGLTVVDDPFKRRGAATRPFDGEGTEASVLNMVEDGVLQHWYLDGASARELG 328
Query: 344 MKT--------TGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITG 395
+ +G S G+ ++ ++ + +L+E++ GLLVT+L+G G+N +TG
Sbjct: 329 LTPNGRARRAGSGTSPGSTNVTLM----RGEKSLEELMADAGDGLLVTDLIGHGVNGLTG 384
Query: 396 DYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMI 455
DYS+GA G+W ENGKI V EITI+G L++MFK++V GSD+ R + + SILIE M
Sbjct: 385 DYSRGAAGFWFENGKIVRPVSEITIAGNLKDMFKRMVP-GSDLDNRYAAAAPSILIEGMA 443
Query: 456 IAG 458
+AG
Sbjct: 444 LAG 446
>gi|154251087|ref|YP_001411911.1| peptidase U62 modulator of DNA gyrase [Parvibaculum lavamentivorans
DS-1]
gi|154155037|gb|ABS62254.1| peptidase U62 modulator of DNA gyrase [Parvibaculum lavamentivorans
DS-1]
Length = 468
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 234/451 (51%), Gaps = 26/451 (5%)
Query: 21 LAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMF 80
+A ++ A+K GA + EG V R G+++ +E++ +++ + +++ GK+
Sbjct: 30 IAAMLVERAQKAGADAAEAMVLEGTSLGVSWRLGRLEDVERSEGRDVGLRVFV--GKRQ- 86
Query: 81 YGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSID 140
+ S++D + +L I +AR D + GL D + L + D +
Sbjct: 87 -ASVSSTDISEAALAPMIERVVAMARVAPEDPYCGLADASLLARDWPDLDIEDKSPQPSA 145
Query: 141 DAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIA 200
+ EA + N+ G + +S L S GF Y + S S +A
Sbjct: 146 EQLAAVAAEAEEAALAVPGVTNSSGAGASWGRSGVALVTSGGFAGAYAGTSSSFSCSVLA 205
Query: 201 IKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFE 260
+G M+RD +SS + L+ P+ IG A ++ + RL +K+ ++ P++++ ++
Sbjct: 206 GEGTAMERDYDFSSKRHAEDLESPKDIGRAAGEKAVRRLHPRKVKSQSVPIVYDPRVSGG 265
Query: 261 LLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQK 320
L+ FA ISG+S+ R ++FL S+GKKIF+ I I++DPH+ S FD EGV+ +
Sbjct: 266 LVGHFASAISGSSIARGTSFLKTSMGKKIFADGISIVDDPHMKRGHRSKPFDGEGVRNHR 325
Query: 321 RLVVKNGIIQGYFLSTYSAKKLGMKTTGNS----GGAHHLIIISNKTKSSDNL------- 369
+V++G + + L T +A++LG+ TTG++ GG + S+ NL
Sbjct: 326 MQLVEDGTLTTWLLDTATARQLGLTTTGHAARGTGGP--------PSPSTTNLYMEAGCL 377
Query: 370 --KEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNM 427
E++ + GL VTE++G GIN +TGDYS+GA G+WIENG+I Y V EIT++G L +M
Sbjct: 378 SVSELIADIKQGLYVTEMIGMGINGVTGDYSRGASGFWIENGEIAYPVSEITVAGNLLDM 437
Query: 428 FKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
F + D+ R + + ++ +E M +AG
Sbjct: 438 FLNLTP-ADDLSFRYTTNAPTVRVEGMTVAG 467
>gi|260432306|ref|ZP_05786277.1| PmbA [Silicibacter lacuscaerulensis ITI-1157]
gi|260416134|gb|EEX09393.1| PmbA [Silicibacter lacuscaerulensis ITI-1157]
Length = 448
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/464 (32%), Positives = 239/464 (51%), Gaps = 44/464 (9%)
Query: 18 FQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGK 77
+++ ML +A+ GA + +G SV VR G ++ E+ ++ + +++ G+
Sbjct: 5 LEEICDQMLEHARTAGADAADTIVVDGASVSVEVRGGALEHAERAESIDVGLRVFL--GR 62
Query: 78 KMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFL 137
+ S+SD ++L A +AR D F+GL +E+ +L T W
Sbjct: 63 RSAI--VSSSDSRPETLKAMAERAVAMAREAPEDPFSGLAEES---------QLATDW-- 109
Query: 138 SIDDAKLIAYRCENEAFNFNSLIVNNEN--------TGVT----------TQQSHFLLAN 179
D +L E A ++L+ + + +GVT T + H L+
Sbjct: 110 DCDALELFDAAAEPSA---DALMQDALSAEAAALAVSGVTQVSDAAAAYGTHRVH--LSA 164
Query: 180 SHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRL 239
S+GF GY S +S IA +G M+RD S + L PE IG A +R + R+
Sbjct: 165 SNGFSGGYTRSTRSVSCVAIAGEGTGMERDYDGDSRTFQADLRSPEEIGRTAGERAVQRV 224
Query: 240 KAKKISTRKCPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIED 299
A+K T + PVLF+ ++ L+ +G ++ R +++L DSLG+++ +H+ ++ED
Sbjct: 225 GARKPQTGRFPVLFDERISSSLIGHLLAASNGAAVARGASWLKDSLGQQVLPAHLSLVED 284
Query: 300 PHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNSG-GAHHLII 358
PH GS FD EG+ T +R +V++G++ G+ L SA+KLGM TGN+ G
Sbjct: 285 PHRPRISGSRPFDAEGLPTARRAIVEDGVLTGWTLDLSSARKLGMAPTGNAARGVSGPPS 344
Query: 359 ISN----KTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYS 414
SN T+ + +++L+ M TGLLVT ++G IN TGDYS+GA G+W+ENG+I Y
Sbjct: 345 PSNWNLSLTQGTATREDLLRDMGTGLLVTSMIGSTINPNTGDYSRGAAGFWVENGEIAYP 404
Query: 415 VEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
V E TI+G L+ M +IV +D S S+LIE M +AG
Sbjct: 405 VNECTIAGNLREMLMRIVP-ANDARPYLSRVVPSLLIEGMTLAG 447
>gi|328545030|ref|YP_004305139.1| Zn-dependent protease [Polymorphum gilvum SL003B-26A1]
gi|326414772|gb|ADZ71835.1| Putative Zn-dependent protease, PmbA-like protein [Polymorphum
gilvum SL003B-26A1]
Length = 447
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/454 (30%), Positives = 241/454 (53%), Gaps = 24/454 (5%)
Query: 15 KSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQ 74
+SE + A ++ A+K GA G +V VR+GK++ ++ ++ + +++
Sbjct: 7 QSELEARAARLVEAARKAGADACDAVAITGTSLAVEVREGKVEETDRAEGDDVTLRVFV- 65
Query: 75 DGKKMFYGNSSTSDFCKKSLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTP 134
G++ +S+T D + A +AR T D +AGL D + L + P
Sbjct: 66 -GRRTASISSNTLD----DIQGLAERAVAMARVTPEDPYAGLADADQLIRD-------IP 113
Query: 135 WFLSIDDAKLIAYRCENEAFNFNSL------IVNNENTGVTTQQSHFLLANSHGFMSGYP 188
+D + A R + A + + + + + + +LA SHGF Y
Sbjct: 114 RLDLLDPTPMTAARLADLAGEAEAAGLAVPGVSKSGGASASWRLAGVVLATSHGFTGAYM 173
Query: 189 FSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRK 248
S+H +S++ +A +G M+RD Y + + +D IG A +R + RL +K++TR
Sbjct: 174 TSRHGLSMTAVAGEGTAMERDYDYDYRTFLEDMDAAVDIGRRAGERAVRRLNPRKLTTRT 233
Query: 249 CPVLFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGS 308
+L+E+ A LL FA I+G ++ R ++FL D + + +F+ I + +DP G+
Sbjct: 234 AAILYESRAARSLLGHFAGAINGAAIARGTSFLKDRMNQPVFAPGITVTDDPLKPRGPGT 293
Query: 309 SSFDNEGVKTQKRLVVKNGIIQGYFLSTYSAKKLGMKTTGNS--GGAHHLIIISNKT--K 364
FD EG +Q ++++G+++ +FL T SA++LG+ G + GG+ + +N T
Sbjct: 294 RPFDGEGTASQPLTLIEDGVLKHWFLDTASARELGLAPNGRAHRGGSGPVPGATNLTLEP 353
Query: 365 SSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQYSVEEITISGKL 424
+EM++++ GLLVT+L+G G+N +TGDYS+GA G+W ENG+ +V EITI+G L
Sbjct: 354 GGRTPEEMMRELGQGLLVTDLIGHGVNGVTGDYSRGAAGFWFENGEPVQAVSEITIAGNL 413
Query: 425 QNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAG 458
++MF ++V SD+ R S S+LIE + IAG
Sbjct: 414 KDMFARLVPC-SDLDARYSVACPSVLIEGLTIAG 446
>gi|126727290|ref|ZP_01743126.1| PmbA [Rhodobacterales bacterium HTCC2150]
gi|126703499|gb|EBA02596.1| PmbA [Rhodobacterales bacterium HTCC2150]
Length = 448
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 145/431 (33%), Positives = 221/431 (51%), Gaps = 26/431 (6%)
Query: 43 EGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYDTINAAY 102
EG S+ VR G ++ E+ ++ + + I + + S SD A
Sbjct: 30 EGQSVSIDVRAGALEQAERAEGIDLGLRVLIGQRQAIV----SFSDANPDLFEGMAERAV 85
Query: 103 NIARFTASDNFAGLPDENTL----EMNPLDF----KLYTPWFLSIDDAKLIAYRCENEAF 154
+AR D + GL D + L +++ L+ +P L D A RCE A
Sbjct: 86 AMAREAPEDPYIGLADPDQLAKDYDVDALEMFDPSAAPSPAELQDD-----AMRCEAAAL 140
Query: 155 NFNSLI-VNNENTGVTTQQSHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYS 213
+ + V+ +G Q+ H ++N GF GY S S I G EM+RD
Sbjct: 141 AVSGISQVSGCGSGYGAQKVHLEMSN--GFSGGYRRSSRSTSCVAITGSGTEMERDYAGE 198
Query: 214 SNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFEAPLAFELLNIFARLISGNS 273
S L PE IG AA+RTI+R A+K +T PV+++ ++ L+ ++G S
Sbjct: 199 SRIFQADLPSPEEIGALAAERTIARAGARKPNTGAYPVVYDERISSGLIGHLLGAVNGAS 258
Query: 274 LYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYF 333
+ R S++L D LG+++ + IIE+PH + GS FD EG+ T +R+VV++GI+QG+
Sbjct: 259 VARGSSWLRDKLGEQVLPKGMSIIENPHRVRISGSKPFDGEGLATARRMVVEDGILQGWT 318
Query: 334 LSTYSAKKLGMKTT-----GNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGD 388
L SAKKLGM++T G S I T S + E+L +M TGLL+T ++G
Sbjct: 319 LDLASAKKLGMQSTANASRGTSSAPSPSIGNIELTAGSKSRAELLAEMGTGLLITSMIGS 378
Query: 389 GINYITGDYSKGAFGYWIENGKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGS 448
IN TGDYS+GA G+W+ENG+IQY V E T++G L M I + +D + S S
Sbjct: 379 SINPTTGDYSRGASGFWVENGEIQYPVNECTVAGNLHEMLAGI-EVANDGQSHLSRVVPS 437
Query: 449 ILIENMIIAGK 459
IL++ +I+AG+
Sbjct: 438 ILVQGLILAGE 448
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,957,542,474
Number of Sequences: 23463169
Number of extensions: 296715273
Number of successful extensions: 732896
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3815
Number of HSP's successfully gapped in prelim test: 675
Number of HSP's that attempted gapping in prelim test: 723317
Number of HSP's gapped (non-prelim): 4665
length of query: 459
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 313
effective length of database: 8,933,572,693
effective search space: 2796208252909
effective search space used: 2796208252909
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)