Query psy8848
Match_columns 459
No_of_seqs 159 out of 1199
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 20:47:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8848.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8848hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qtd_A PMBA protein; putative 100.0 5.1E-97 2E-101 770.0 57.1 439 13-459 11-449 (449)
2 3tv9_A Putative peptide matura 100.0 3.4E-95 1.2E-99 756.4 53.9 435 13-456 23-457 (457)
3 1vpb_A Putative modulator of D 100.0 5.4E-91 1.8E-95 726.2 52.1 432 16-459 16-451 (451)
4 1vl4_A PMBA-related protein; s 100.0 4.2E-89 1.4E-93 711.2 48.8 426 17-459 14-447 (447)
5 2ux9_A Dodecin; flavoprotein; 18.3 2.8E+02 0.0097 20.1 6.1 50 14-66 14-63 (69)
6 2vxa_A Dodecin; flavoprotein, 17.7 3E+02 0.01 20.1 6.7 50 14-66 15-64 (72)
7 2yiz_A Dodecin; flavoprotein, 16.8 3.1E+02 0.011 19.9 6.4 50 14-66 14-63 (69)
8 2bcm_B F1845 fimbrial protein; 15.5 1.4E+02 0.0049 25.1 3.9 35 378-412 109-144 (165)
9 3onr_A Protein transport prote 13.0 2.4E+02 0.0081 20.7 4.1 46 14-64 14-61 (72)
10 1qys_A TOP7; alpha-beta, novel 12.2 2.5E+02 0.0085 20.8 4.0 29 14-42 25-53 (106)
No 1
>3qtd_A PMBA protein; putative modulator of gyrase (PMBA), structural genomics, PS biology, midwest center for structural genomics, MCSG; 2.70A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.1e-97 Score=770.00 Aligned_cols=439 Identities=39% Similarity=0.692 Sum_probs=423.3
Q ss_pred cCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeeeEEEEEECCeeeEEEEecceeEEEEEEEeCCeeeEEEEEEeCCCCHH
Q psy8848 13 YSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKK 92 (459)
Q Consensus 13 ~~~~~~~~~~~~~l~~a~~~g~~~~ev~~~~~~~~~v~~~~~~i~~~~~~~~~gi~iRv~~~~gr~~~~G~ast~~l~~~ 92 (459)
+.+++++++++++|+.|++.|+++|||++++.++.++++++|+|++...+.+.|++|||++ |+| +||+++++++++
T Consensus 11 ~~~~~~~~~~~~~l~~a~~~gad~aev~~~~~~~~sv~~~~g~v~~~~~~~~~g~gvRv~~-~~~---~G~ast~~ls~~ 86 (449)
T 3qtd_A 11 SVLPDLREQVEQIIAEARRQGASACEVAVSLEQGLSTSVRQGEVETVEFNRDQGFGITLYA-GQR---KGSASTSATGEA 86 (449)
T ss_dssp GGHHHHHHHHHHHHHHHHHTTCSEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEE-TTE---EEEEEESCCSHH
T ss_pred chhHHHHHHHHHHHHHHHHcCCCEEEEEEEEeeeEEEEEECCEeeEEEeeeeeeEEEEEEE-CCe---EEEEEeCCCCHH
Confidence 4577889999999999999999999999999999999999999999999999999999999 999 999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCCCCCcccCCCCCCccCCCCCCCHHHHHHHHHHHHHHHhcCCCCeeEecceEEEEEE
Q psy8848 93 SLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQ 172 (459)
Q Consensus 93 ~l~~~v~~A~~~a~~~~~d~~~~l~~~~~~~~~~~~~~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 172 (459)
+|++++++|+++|+..+++++.+||++..++..++.+..|||.++++++++++++++++.+++.+++|+++.+++|+...
T Consensus 87 ~l~~~v~~A~~~A~~~~~d~~~~l~~~~~~~~~~~~~~~~~p~~~~~~e~i~ll~~~~~~a~~~d~~i~~~~~~~~~~~~ 166 (449)
T 3qtd_A 87 AIRETVAAALAIARHTSEDECAGLADAALMARELPELDLYHPWSLSPEQAVERALACEAAAFAADKRVTKADGTTLNTHQ 166 (449)
T ss_dssp HHHHHHHHHHHHHHHSCCCTTCSCCCGGGBCSCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhhccCCCcccCCCChhhcccccCcccccCcccCCHHHHHHHHHHHHHHHHhcCCCEEEECcEEEEEEE
Confidence 99999999999999999998888888765555677777899999999999999999999999889999988778999999
Q ss_pred EEEEEEecCCcceeeeeeEEEEEEEEEEEeCCceeeeeeeccCCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCceEeEE
Q psy8848 173 SHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252 (459)
Q Consensus 173 ~~~~i~nS~G~~~~~~~~~~~~~~~~~a~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~a~~~l~a~~~~~g~y~Vv 252 (459)
.++.|+||+|+.+++..+++++++++++++++.++++|++.+++.+.++++++.++++|+++|+.+|+++++|+|+||||
T Consensus 167 ~~~~~~nS~G~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~a~~~a~~~L~a~~~~~G~~~Vv 246 (449)
T 3qtd_A 167 GCRVYGNSHGFIGGYASTRHSLSCVMIAEGEGQMQRDYWYDVNRRGEALASAESIGRRAAERAASRLGARPVQTAEVPVL 246 (449)
T ss_dssp EEEEEEETTSCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEESSGGGSCCHHHHHHHHHHHHHHTTTCBCCCCEEEEEE
T ss_pred EEEEEEeCCCceEEEeeceEEEEEEEEEEcCCceeeeeeeccccChhHccCHHHHHHHHHHHHHHhcCCccCCCCeEEEE
Confidence 99999999999999999999999999999988899999998888888887899999999999999999999999999999
Q ss_pred ecchhHHHHHHHHHhcccccccccccCccccCCCCeecCCCceEEeCCCCCCCCcccccCCcCccccceeEEeCcEEccc
Q psy8848 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGY 332 (459)
Q Consensus 253 l~p~a~~~ll~~~~~~l~~~~~~~g~S~l~~klG~~vas~~ltl~Ddp~~~~~~gs~~fDdEGv~t~~~~LIe~Gvl~~~ 332 (459)
|+|.+++.|+|+++++++|+++++|+|+|++|+|++|+|+.|||+|||++|+++|+++|||||+|+++++|||||||++|
T Consensus 247 l~p~~~~~ll~~~~~~~~g~~v~~g~S~l~~klG~~v~s~~vti~dDp~~~~~~gs~~fDdEGv~t~~~~lIe~GvL~~~ 326 (449)
T 3qtd_A 247 FAPEIAVGLFGHFLGAISGGSLYRKSSFLEGALGQRLFPEWLSIDERPHLVGALGSASFDSDGLATYAKPFVENGELVSY 326 (449)
T ss_dssp ECHHHHHHHHHHHHHHTBHHHHHTTCCTTTTCTTCBCSCTTCCEEECTTCTTCTTCCSBCTTCBBCCCEEEEETTEECCC
T ss_pred ECChHHHHHHHHHHHhcChhhHhcCCCcccccCCCEecCCceEEEECCCCCCCCCCCCCCCCCCcCCccEEEECCEEccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccChHHHHHcCCCCCcCcccccceEEeCCCCCCCCCHHHHHHcCCCEEEEEEeCCCccccccccEEEeeEEEEEeCCEEe
Q psy8848 333 FLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQ 412 (459)
Q Consensus 333 l~d~~~A~~~g~~~TGna~~~~N~~i~~g~~~~~~s~~eli~~~~~Gi~v~~~~g~~~n~~tG~Fs~~~~g~~IenGei~ 412 (459)
|||+++|+++|++|||||+||+|++|+|| +.+++|||+++++||||++++|+++||.||+||+++.|||||||||+
T Consensus 327 l~d~~~A~~~G~~~TGna~~~~N~~i~~G----~~s~eeli~~~~~Gl~v~~~~G~~vn~~tG~fs~~~~gy~IenGei~ 402 (449)
T 3qtd_A 327 VLGTYSGRKLGLPSTANAGGVHNLFVSHG----DEDQAALIRRMERGLLVTELMGQGVNLVTGDYSRGAAGYWVENGEIQ 402 (449)
T ss_dssp BCCHHHHHHHTSCCCSCTTCCSSEEECCC----SCCHHHHHHHHCSEEEEEEEESCCBCTTTCEEEEEEEEEEEETTEEE
T ss_pred ccCHHHHHHhCCCCCcCccCcceEEEeCC----CCCHHHHHHhcCCEEEEEeccCCCcCCCCceEEeEEEEEEEECCEEe
Confidence 99999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred cceeceEEEecHHHHHHhhHHccCcccccCCCccceEEEeeEEEecC
Q psy8848 413 YSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459 (459)
Q Consensus 413 ~pV~~~~isgn~~~~L~~I~~v~~d~~~~~~~~~P~i~v~~l~v~G~ 459 (459)
+||++++|+||++++|++|.+||+|+++.+++.||+|+|++|+|+|+
T Consensus 403 ~pV~~~ti~Gn~~~~l~~I~~vg~d~~~~~~~~~Psi~i~~~~V~G~ 449 (449)
T 3qtd_A 403 FPVQEVTIAANLRDLFRRIVAVGKDIERRGNLHTGSVLVESMMVAGR 449 (449)
T ss_dssp EEEEEEEEEEEHHHHHHTEEEECSCCCCSSSEECCCEEEEEEEEECC
T ss_pred eeeeeEEEEEcHHHHHHhhHhhccCcEecCCCcCCeEEECcEEEecC
Confidence 99999999999999999999999999999999999999999999996
No 2
>3tv9_A Putative peptide maturation protein; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta, cytosol; 2.50A {Shigella flexneri}
Probab=100.00 E-value=3.4e-95 Score=756.37 Aligned_cols=435 Identities=38% Similarity=0.661 Sum_probs=417.5
Q ss_pred cCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeeeEEEEEECCeeeEEEEecceeEEEEEEEeCCeeeEEEEEEeCCCCHH
Q psy8848 13 YSKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKK 92 (459)
Q Consensus 13 ~~~~~~~~~~~~~l~~a~~~g~~~~ev~~~~~~~~~v~~~~~~i~~~~~~~~~gi~iRv~~~~gr~~~~G~ast~~l~~~ 92 (459)
.++++++++++++|+.|++. +++|||++++.++.++.+++|+|++...+.+.|++|||++ |+| +||++|++++++
T Consensus 23 ~~~~~~~~~~~~~l~~a~~~-ad~aev~~~~~~~~sv~~~~g~ve~~~~~~~~gigvRv~~-~g~---~G~ast~~ls~~ 97 (457)
T 3tv9_A 23 NARKILEEAVSTALELASGK-SDGAEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYH-QNR---KGSASSTDLSPQ 97 (457)
T ss_dssp SHHHHHHHHHHHHHHHHHTT-CSEEEEEEEEEEEEEEEECTTSCCEEEEEEEEEEEEEEEE-TTE---EEEEEESCCSHH
T ss_pred CchHHHHHHHHHHHHHHHhc-CCEEEEEEEEeEEEEEEEECCEeeEEEeeeeeeEEEEEEE-CCE---EEEEEECCCCHH
Confidence 45778999999999999998 9999999999999999999999999999999999999999 999 999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCCCCCcccCCCCCCccCCCCCCCHHHHHHHHHHHHHHHhcCCCCeeEecceEEEEEE
Q psy8848 93 SLYDTINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPWFLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQ 172 (459)
Q Consensus 93 ~l~~~v~~A~~~a~~~~~d~~~~l~~~~~~~~~~~~~~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 172 (459)
+|++++++|+++|+..+++++.+||++..++..++.+..|+|.++++++++++++++++.+++.+++|+++.+++|+...
T Consensus 98 ~l~~~v~~A~~~A~~~~~d~~~~l~~~~~~~~~~~~~~~~~p~~~~~~e~i~ll~~~~~~a~~~d~~I~~~~~~~~~~~~ 177 (457)
T 3tv9_A 98 AIARTVQAALDIARYTSPDPCAGVADKELLAFDAPNLDLFHPAEVSPDEAIELAARAEQAALQADKRITNTEGGSFNSHY 177 (457)
T ss_dssp HHHHHHHHHHHHTTSSCCCTTCSSCCGGGBCSSCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHSCTTEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhccCCCcccCCCChhhccccCCcccccCccCCCHHHHHHHHHHHHHHHHhcCCCeeEECcEEEEEEE
Confidence 99999999999999999988888888765555677777899999999999999999999999989999988878999999
Q ss_pred EEEEEEecCCcceeeeeeEEEEEEEEEEEeCCceeeeeeeccCCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCceEeEE
Q psy8848 173 SHFLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVL 252 (459)
Q Consensus 173 ~~~~i~nS~G~~~~~~~~~~~~~~~~~a~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~a~~~l~a~~~~~g~y~Vv 252 (459)
.++.|+||+|+.+++..+++++++++++++++.++++|++.+++.+.++++++.++++|+++|+.+|+|+++|+|+||||
T Consensus 178 ~~~~~~nS~G~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~a~~~a~~~L~a~~~~~G~~~Vv 257 (457)
T 3tv9_A 178 GVKVFGNSHGMLQGYCSTRHSLFSCVIAEENGDMERDYAYTIGRAMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVI 257 (457)
T ss_dssp EEEEEEETTTEEEEEEEEEEEEEEEEEEEC--CEEEEEEEEEESSGGGSCCHHHHHHHHHHHHHHTSSCBCCCSCEEEEE
T ss_pred EEEEEEeCCCCeEEEEeeeEEEEEEEEEeCCCceeeeEEeccccChhhccCHHHHHHHHHHHHHHhcCCcCCCCcEEEEE
Confidence 99999999999999999999999999999888899999998888888887799999999999999999999999999999
Q ss_pred ecchhHHHHHHHHHhcccccccccccCccccCCCCeecCCCceEEeCCCCCCCCcccccCCcCccccceeEEeCcEEccc
Q psy8848 253 FEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGY 332 (459)
Q Consensus 253 l~p~a~~~ll~~~~~~l~~~~~~~g~S~l~~klG~~vas~~ltl~Ddp~~~~~~gs~~fDdEGv~t~~~~LIe~Gvl~~~ 332 (459)
|+|.+++.|+|+++++++|+++++|+|+|++|+|++|+||.|||+|||++|+++|+++|||||+|+++++|||||||++|
T Consensus 258 l~p~~~~~ll~~~~~~~~g~~~~~g~S~l~~klGe~v~s~~vti~DDp~~~~~~gs~~fDdEGv~t~~~~lIe~GvL~~~ 337 (457)
T 3tv9_A 258 FANEVATGLFGHLVGAIAGGSVYRKSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQW 337 (457)
T ss_dssp ECHHHHHHHHHHHHHHSBHHHHHTTCCTTTTCTTSBCSCTTCCEEECTTCTTCSSCCSSCTTCBCCCCEEEEETTEECCC
T ss_pred ECcHHHHHHHHHHHHhcChHHHhcCCccchhcCCCeecCCceEEEECCCCCCCCCCCCCCCCCCcCCccEEEECCEEccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccChHHHHHcCCCCCcCcccccceEEeCCCCCCCCCHHHHHHcCCCEEEEEEeCCCccccccccEEEeeEEEEEeCCEEe
Q psy8848 333 FLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKIQ 412 (459)
Q Consensus 333 l~d~~~A~~~g~~~TGna~~~~N~~i~~g~~~~~~s~~eli~~~~~Gi~v~~~~g~~~n~~tG~Fs~~~~g~~IenGei~ 412 (459)
|||+++|+++|++|||||++|+|++|+|| +.+++|||+++++||||+++||+++||.||+||+++.|||||||||+
T Consensus 338 l~d~~~A~~~G~~~TGna~~~~N~~i~~G----~~s~eeli~~~~~Gl~v~~~~G~~vn~~tG~Fs~~~~gy~IenGei~ 413 (457)
T 3tv9_A 338 LLTSYSARKLGLKSTGHAGGIHNWRIAGQ----GLSFEQMLKEMGTGLVVTELMGQGVSAITGDYSRGAAGFWVENGEIQ 413 (457)
T ss_dssp BCCHHHHHHHTSCCCSCTTCCCCEEECCC----SCCHHHHHHHHCSEEEEEEEESCCCCTTTCEEEEEEEEEEEETTEEE
T ss_pred CcCHHHHHHhCCCCCcccCCcccEEEeCC----CCCHHHHHhhcCCEEEEEeccCCccCCCCceEEEEEEEEEEECCEEe
Confidence 99999999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred cceeceEEEecHHHHHHhhHHccCcccccCCCccceEEEeeEEE
Q psy8848 413 YSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMII 456 (459)
Q Consensus 413 ~pV~~~~isgn~~~~L~~I~~v~~d~~~~~~~~~P~i~v~~l~v 456 (459)
+||++++|+||++++|++|.+||+|++++++..||+|+|++|+|
T Consensus 414 ~pV~~~ti~Gn~~~~l~~I~~vg~d~~~~~~~~~psi~i~~m~v 457 (457)
T 3tv9_A 414 YPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKI 457 (457)
T ss_dssp EEEEEEEEEEEHHHHHHTCCEECSCCCCSSSEECCCEEEEEEEC
T ss_pred eeeeeEEEEEcHHHHHHhhHhhcCCcEecCCcccCeEEECCCCC
Confidence 99999999999999999999999999999999999999999986
No 3
>1vpb_A Putative modulator of DNA gyrase; structural genomics, joint for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Bacteroides thetaiotaomicron} SCOP: d.283.1.1
Probab=100.00 E-value=5.4e-91 Score=726.21 Aligned_cols=432 Identities=28% Similarity=0.442 Sum_probs=406.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEEEEEeeeEEEEEECCeeeEEEEecceeEEEEEEEeCCeeeEEEEEEeCCCCHHHHH
Q psy8848 16 SEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLY 95 (459)
Q Consensus 16 ~~~~~~~~~~l~~a~~~g~~~~ev~~~~~~~~~v~~~~~~i~~~~~~~~~gi~iRv~~~~gr~~~~G~ast~~l~~~~l~ 95 (459)
++++++++++|+.|++.|+++|||++++.++.++++++|+|++...+.+.|++|||++ |+| +||++++++++++|+
T Consensus 16 ~~~~~~~~~~l~~a~~~gad~aev~~~~~~~~~v~~~~g~v~~~~~~~~~g~gvRv~~-~~~---~g~ast~~l~~~~l~ 91 (451)
T 1vpb_A 16 DENKKLAQWAMDYALKNGCQAAKVLLYSSSNTSFELRDAKMDRLQQASEGGLSLSLYV-DGR---YGSISTNRLNRKELE 91 (451)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEEEEEEEEEEEEC--CCEEEEEEEEEEEEEEEE-TTE---EEEEEESCCCHHHHH
T ss_pred chhHHHHHHHHHHHHHcCCCEEEEEEEEEEEEEEEEECCEeeEEEeccceeEEEEEEE-CCE---EEEEEeCCCCHHHHH
Confidence 5667899999999999999999999999999999999999999999999999999999 999 999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCCCCcccC-CCCCCccCCCC--CCCHHHHHHHHHHHHHHHhcCCCCeeEecceEEEEEE
Q psy8848 96 DTINAAYNIARFTASDNFAGLPDENTLEM-NPLDFKLYTPW--FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQ 172 (459)
Q Consensus 96 ~~v~~A~~~a~~~~~d~~~~l~~~~~~~~-~~~~~~~~~~~--~~~~ee~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 172 (459)
+++++|.++|+..+++++.+||++..+.. .++.+..++|+ ++++++++++++++++.+++.+++|+++ ++.|+...
T Consensus 92 ~~v~~A~~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~~-~~~~~~~~ 170 (451)
T 1vpb_A 92 TFIKNGIDSTRYLAKDEARVLADPSRYYKGGKPDLKLYDAKFASLNPDDKIEMAKAVAEEALGKDERIISV-GSSYGDGE 170 (451)
T ss_dssp HHHHHHHHHHTTSCCCTTCCCCCGGGBCCSCCCCCCCSCTTGGGCCHHHHHHHHHHHHHTTTTSCTTEEEE-EEEEEEEE
T ss_pred HHHHHHHHHHhccCCCccccCCChhhccccccccccccCccccCCCHHHHHHHHHHHHHHHHhcCCCeEEE-EEEEEEEE
Confidence 99999999999998888777876544322 34555678875 8899999999999999999888999887 48999999
Q ss_pred EEEEEEecCCcceeeeeeEEEEEEEE-EEEeCCceeeeeeeccCCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCceEeE
Q psy8848 173 SHFLLANSHGFMSGYPFSKHIISISP-IAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPV 251 (459)
Q Consensus 173 ~~~~i~nS~G~~~~~~~~~~~~~~~~-~a~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~a~~~l~a~~~~~g~y~V 251 (459)
.++.|+||+|+.+++..+++++++++ ++.+|+.++++|++.+++.+++|+ ++.++++|+++|+.+|+++++++|+|||
T Consensus 171 ~~~~~~nS~G~~~~~~~~~~~~~~~~~~a~~g~~~~~~~~~~~~~~~~~l~-~~~~~~~a~~~a~~~l~a~~~~~G~~~V 249 (451)
T 1vpb_A 171 DFAYRLISNGFEGETKSTWYSLSADITIRGEGEARPSAYWYESSLYMNDLI-KKGIGQKALERVLRKLGQKKVQSGKYTM 249 (451)
T ss_dssp EEEEEEETTTEEEEEEEEEEEEEEEEEECCSTTCCCEEEEEEEESSGGGSC-CSSHHHHHHHHHHTTTTCBCCCCEEEEE
T ss_pred EEEEEEECCCceEEEeccEEEEEEEEEEEEcCCcccceEEeeccCChHhCC-HHHHHHHHHHHHHHhcCCcCCCCCeEeE
Confidence 99999999999999999999999999 998877788999998888888884 8999999999999999999999999999
Q ss_pred EecchhHHHHHHHHHhcccccccccccCccccCCCCeecCCCceEEeCCCCCCCCcccccCCcCccccceeEEeCcEEcc
Q psy8848 252 LFEAPLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQG 331 (459)
Q Consensus 252 vl~p~a~~~ll~~~~~~l~~~~~~~g~S~l~~klG~~vas~~ltl~Ddp~~~~~~gs~~fDdEGv~t~~~~LIe~Gvl~~ 331 (459)
||+|.+++.|++++.++|+|+++++|+|+|++|+|++|+||.|||+|||++|+++|+++|||||+|+++++|||||||++
T Consensus 250 vl~p~~~~~ll~~~~~~l~~~~v~~g~S~l~~klG~~v~s~~vti~DDp~~~~~~gs~~fDdEGvpt~~~~LIe~GvL~~ 329 (451)
T 1vpb_A 250 VVDPMNSSRLLSPMISALNGSALQQKNSFLLNKLNEKIASDRLTLTDEPHLVKASGARYFDNEGIATERRSIFDKGVLNT 329 (451)
T ss_dssp EECTTTHHHHHHHHHHTTBHHHHHTTCCTTTTCTTSBCSCTTCCEEECTTCTTCTTCCSBCTTCBBCCCEEEEETTEECC
T ss_pred EECchHHHHHHHHHHHhcCcHHHHcCCccccccCCCeecCCCcEEEECCCCCCCCCCCCCCCCCcCCcccEEEECCEEec
Confidence 99999999999888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccChHHHHHcCCCCCcCcccccceEEeCCCCCCCCCHHHHHHcCCCEEEEEEeCCCccccccccEEEeeEEEEEeCCEE
Q psy8848 332 YFLSTYSAKKLGMKTTGNSGGAHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMGDGINYITGDYSKGAFGYWIENGKI 411 (459)
Q Consensus 332 ~l~d~~~A~~~g~~~TGna~~~~N~~i~~g~~~~~~s~~eli~~~~~Gi~v~~~~g~~~n~~tG~Fs~~~~g~~IenGei 411 (459)
||||+++|+++|++|||| ||+|++|+|| +.+++|||+++++||||+++||+++||.||+||+++.|||||||||
T Consensus 330 ~l~d~~tA~~~G~~~TGn--r~~N~~i~pG----~~s~eeli~~~~~Gl~v~~~~g~~vd~~tG~fs~g~~gy~IenGei 403 (451)
T 1vpb_A 330 YFIDTYNAKKMGVDPTIS--GSSILVMETG----DKNLDGLIAGVEKGILVTGFNGGNNNSSTGDFSYGIEGFLIENGKL 403 (451)
T ss_dssp CBCCHHHHHHHTSCCCCS--SCSCEEECCC----SCCHHHHHHTCSEEEEEEEEEEEEECTTTCEEEEEEEEEEEETTEE
T ss_pred cccCHHHHHHcCCCCCCC--CcccEEEeCC----CCCHHHHHhhcCCEEEEEeccccccCCCceeEEEEEEEEEEECCEE
Confidence 999999999999999999 8999999999 9999999999999999999999889999999999999999999999
Q ss_pred ecceeceEEEecHHHHHHhhHHccCcccccCCCccceEEEeeEEEecC
Q psy8848 412 QYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459 (459)
Q Consensus 412 ~~pV~~~~isgn~~~~L~~I~~v~~d~~~~~~~~~P~i~v~~l~v~G~ 459 (459)
++||++++|+||++++|++|++||+|+++.+++++|+|+|++|+|+|+
T Consensus 404 ~~pV~~~ti~Gn~~~~l~~I~~vg~d~~~~g~~~~P~i~v~~~~V~G~ 451 (451)
T 1vpb_A 404 TQPVSEMNVTGNLITLWNSLVATGNDPRLNSSWRIPSLVFEGVDFSGL 451 (451)
T ss_dssp EEEEEEEEEEEEHHHHHHTEEEECSCCCTTSSEECCCEEEEEEEEEEC
T ss_pred CceeccEEEEecHHHHHHhhHhhcCcceecCCCcCCeEEEccEEEecC
Confidence 999999999999999999999999999998889999999999999995
No 4
>1vl4_A PMBA-related protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS regulation; 1.95A {Thermotoga maritima} SCOP: d.283.1.1
Probab=100.00 E-value=4.2e-89 Score=711.22 Aligned_cols=426 Identities=27% Similarity=0.435 Sum_probs=396.6
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEEEEEeeeEEEEEECCeeeEEEEecceeEEEEEEEeCCeeeEEEEEEeCCCCHHHHHH
Q psy8848 17 EFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKNMNVIIYIQDGKKMFYGNSSTSDFCKKSLYD 96 (459)
Q Consensus 17 ~~~~~~~~~l~~a~~~g~~~~ev~~~~~~~~~v~~~~~~i~~~~~~~~~gi~iRv~~~~gr~~~~G~ast~~l~~~~l~~ 96 (459)
.+.++++++|+.|++.|++ |||++++.++.++++++|+|++.....+.|++|||++ |+| +||+++++++++ ++
T Consensus 14 ~~~~~~~~~l~~a~~~gad-aev~~~~~~~~~v~~~~g~v~~~~~~~~~g~gvRv~~-~~~---~g~a~t~~l~~~--~~ 86 (447)
T 1vl4_A 14 TFEEFKDRLFALAKKNGVE-VQISFLETREFSLRLANGDLDQYTDAGKFNVEIKVLK-DGK---TGTFRTQVLENP--EK 86 (447)
T ss_dssp CHHHHHHHHHHHHHHHTCE-EEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEE-TTE---EEEEEESSCCCH--HH
T ss_pred CHHHHHHHHHHHHHHcCCc-EEEEEEEeEeEEEEEECCEeEEEEeeeeeeEEEEEEE-CCE---EEEEEeCCCChH--HH
Confidence 3567899999999999999 9999999999999999999999999999999999999 999 999999999877 89
Q ss_pred HHHHHHHHhhhcCCCCCCCCCCCCcccCCCCCCccCCCC--CCCHHHHHHHHHHHHHHHhcCCCCeeEecceEEEEEEEE
Q psy8848 97 TINAAYNIARFTASDNFAGLPDENTLEMNPLDFKLYTPW--FLSIDDAKLIAYRCENEAFNFNSLIVNNENTGVTTQQSH 174 (459)
Q Consensus 97 ~v~~A~~~a~~~~~d~~~~l~~~~~~~~~~~~~~~~~~~--~~~~ee~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 174 (459)
++++|+++|+..+++++..||++. ..++.+..++|+ ++++++++++++++++.+++ +++|+++.+++|+....+
T Consensus 87 ~v~~A~~~a~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~-~~~i~~~~~~~~~~~~~~ 162 (447)
T 1vl4_A 87 CFEEALSNLQVKDSEEKEYFFEGG---KEYREMETYVGRFEKLSVKEKMDMAKKAHESAAK-DERVVMVPTVMYKDMVIK 162 (447)
T ss_dssp HHHHHHHGGGCC----CCCCCCSC---CCCCCCCCCCCCGGGSCHHHHHHHHHHHHHHHHC-STTEEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHhccCCCccccCCCcc---cccccccccCCcccCCCHHHHHHHHHHHHHHHhc-CCCeEEeCcEEEEEEEEE
Confidence 999999999998888876776543 234455667875 88999999999999999998 899988855899999999
Q ss_pred EEEEecCCcceeeeeeEEEEEEEEEEEeCCceeeeeeeccCCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCceEeEEec
Q psy8848 175 FLLANSHGFMSGYPFSKHIISISPIAIKGKEMQRDNWYSSNSDPKKLDQPEIIGFYAAKRTISRLKAKKISTRKCPVLFE 254 (459)
Q Consensus 175 ~~i~nS~G~~~~~~~~~~~~~~~~~a~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~a~~~l~a~~~~~g~y~Vvl~ 254 (459)
+.|+||+|+.+++..+++++++++++.+| .++++|++.+++.++++ +++.++++|+++|+.+|+++++++|+|||||+
T Consensus 163 ~~~~nS~G~~~~~~~~~~~~~~~~~a~~g-~~~~~~~~~~~~~~~~l-~~~~~~~~a~~~a~~~l~a~~~~~G~~~Vvl~ 240 (447)
T 1vl4_A 163 KIITNTLGLDVESQMDGGFLFAMAIARDA-NPRSGSWYELARTPEDL-NPEEIGKRAAEEAISLIGSKTIPSGKYPVLMR 240 (447)
T ss_dssp EEEEETTSCEEEEEEEEEEEEEEEEECSS-SCEEEEEEEEESSGGGC-CHHHHHHHHHHHHHHTTTCBCCCSEEEEEEEC
T ss_pred EEEEeCCCCceEEeccEEEEEEEEEEecC-CeeeEEEeecccChhhC-CHHHHHHHHHHHHHHhcCCccCCCceEEEEEC
Confidence 99999999999999999999999999988 88999999888888888 49999999999999999999999999999999
Q ss_pred chhHHHHHHHHHhcccccccccccCccccCCCCeecCCCceEEeCCCCCCCCcccccCCcCccccceeEEeCcEEccccc
Q psy8848 255 APLAFELLNIFARLISGNSLYRKSTFLVDSLGKKIFSSHIQIIEDPHILGSFGSSSFDNEGVKTQKRLVVKNGIIQGYFL 334 (459)
Q Consensus 255 p~a~~~ll~~~~~~l~~~~~~~g~S~l~~klG~~vas~~ltl~Ddp~~~~~~gs~~fDdEGv~t~~~~LIe~Gvl~~~l~ 334 (459)
|.+++.|+..+.++++|+++++|+|+|++|+|++|+||.|||+|||++|+++|+++|||||+|+++++|||||||++|||
T Consensus 241 p~~~~~lle~~g~~le~~~~~~g~S~l~~klG~~v~s~~vti~DDp~~~~~~gs~~fDdEGvpt~~~~LIe~GvL~~~l~ 320 (447)
T 1vl4_A 241 NTALLDLMEMFIPMISAENVQKNLSPLKGKLGEQVGNPAVSIKDLPYHPKGLSSTPFDDEGVPTTEKFVLENGVLKTFLH 320 (447)
T ss_dssp HHHHHHHGGGGHHHHBHHHHHTTCCTTTTCTTSBCSCTTCCEEEESCCTTCTTCCSBCTTSCBCCCEEEEETTEECCCBC
T ss_pred ChHHHHHHHHHHHHcChHHHHcCCccccccCCCeecCCCcEEEECCCCCCCCcCCcCCCCCCCCcccEEEECCEEehhhh
Confidence 99999999667778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHcCCCCCcCccc----ccceEEeCCCCCCCCCHHHHHHcCCCEEEEEEeCC-C-ccccccccEEEeeEEEEEeC
Q psy8848 335 STYSAKKLGMKTTGNSGG----AHHLIIISNKTKSSDNLKEMLKKMNTGLLVTELMG-D-GINYITGDYSKGAFGYWIEN 408 (459)
Q Consensus 335 d~~~A~~~g~~~TGna~~----~~N~~i~~g~~~~~~s~~eli~~~~~Gi~v~~~~g-~-~~n~~tG~Fs~~~~g~~Ien 408 (459)
|+++|+++|++|||||++ |+|++|+|| +.+++|||+++++||||+++|| + ++||.||+||+++.||||||
T Consensus 321 d~~tA~~~g~~~TGna~rp~~r~~N~~i~~G----~~s~eeli~~~~~Gl~v~~~~g~~sgvd~~tG~fs~~~~gy~Ien 396 (447)
T 1vl4_A 321 NLKTARKEGVEPTGNGFVGGIRPVNLMLMPG----EKSFEELLKEMDRGVVITEVEGMHAGANSISGEFSLFAKGYWVEN 396 (447)
T ss_dssp CHHHHHHHTCCCCSCEETTEECCSEEEECCC----SBCHHHHHHHHCSEEEEEEEECHHHHBCTTTCEEEEEEEEEEEET
T ss_pred cHHHHHHcCCCCCCCCCCCCCcceEEEEeCC----CCCHHHHHhhcCCEEEEEeeeccccccCCCceeEEEEEEEEEEEC
Confidence 999999999999999997 999999999 9999999999999999999999 6 49999999999999999999
Q ss_pred CEEecceeceEEEecHHHHHHhhHHccCcccccCCCccceEEEeeEEEecC
Q psy8848 409 GKIQYSVEEITISGKLQNMFKQIVAIGSDVLTRNSNTSGSILIENMIIAGK 459 (459)
Q Consensus 409 Gei~~pV~~~~isgn~~~~L~~I~~v~~d~~~~~~~~~P~i~v~~l~v~G~ 459 (459)
|||++||++++|+||++++|++|++||+|+++.|+.++|+|+|++++|+|+
T Consensus 397 Gei~~pV~~~~l~Gn~~~~L~~I~~vg~d~~~~g~~~~P~i~v~~~~V~G~ 447 (447)
T 1vl4_A 397 GEIAHGVEDITISGNFLDLLRKIVLVGNDVKVSQHTIAPSVLVEVLDVAGK 447 (447)
T ss_dssp TEEEEEEEEEEEEEEHHHHHHTEEEEBSCCEECSSEEECCEEEEEEEEC--
T ss_pred CEECceecceEEEEcHHHHHHhhHhhcCCcEecCCCcCceEEEeeEEEeCC
Confidence 999999999999999999999999999999998889999999999999995
No 5
>2ux9_A Dodecin; flavoprotein; HET: FMN COA; 1.4A {Thermus thermophilus} SCOP: d.230.2.1 PDB: 2cz8_A* 2deg_A 2deh_A 2dev_A 2v21_A* 2v18_A* 2vyx_A* 2v19_A*
Probab=18.34 E-value=2.8e+02 Score=20.11 Aligned_cols=50 Identities=12% Similarity=0.107 Sum_probs=33.7
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeeeEEEEEECCeeeEEEEeccee
Q psy8848 14 SKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66 (459)
Q Consensus 14 ~~~~~~~~~~~~l~~a~~~g~~~~ev~~~~~~~~~v~~~~~~i~~~~~~~~~g 66 (459)
|..-+++.++.+++.|.+- .+ .+..-+...+...+++|++..++..-.-+
T Consensus 14 S~~S~edAi~nAi~~AskT-l~--ni~~~eV~e~~~~v~dgkv~~yqv~lkV~ 63 (69)
T 2ux9_A 14 SEEGLEAAIQAALARARKT-LR--HLDWFEVKEIRGTIGEAGVKEYQVVLEVG 63 (69)
T ss_dssp ESSCHHHHHHHHHHHHHHH-CC--CEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHhc-cc--CCeEEEEEEEEEEEeCCcEEEEEEEEEEE
Confidence 3445677888888888875 44 34444556667778999999876554433
No 6
>2vxa_A Dodecin; flavoprotein, flavin, riboflavin, lumichrome, archaea; HET: RBF; 2.60A {Halorhodospira halophila}
Probab=17.70 E-value=3e+02 Score=20.14 Aligned_cols=50 Identities=8% Similarity=0.104 Sum_probs=33.5
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeeeEEEEEECCeeeEEEEeccee
Q psy8848 14 SKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66 (459)
Q Consensus 14 ~~~~~~~~~~~~l~~a~~~g~~~~ev~~~~~~~~~v~~~~~~i~~~~~~~~~g 66 (459)
|..-+++.++.+++.|.+- .. .+..-+...+...+++|++..++..-.-+
T Consensus 15 S~~S~edAi~nAi~~AskT-l~--ni~~~eV~e~r~~v~dgki~~yqV~lKV~ 64 (72)
T 2vxa_A 15 SPNGIEEAVNNAIARAGET-LR--HLRWFEVVDTRGHIEGGRVNHWQVTVKVG 64 (72)
T ss_dssp ESSCHHHHHHHHHHHHHHH-CC--CEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHhh-cc--CCeEEEEEEEEEEEeCCcEEEEEEEEEEE
Confidence 3445677888888888875 44 34444556666778999998876554333
No 7
>2yiz_A Dodecin; flavoprotein, flavin binding protein, protein-engineering, P storage protein; HET: COA FMN GOL; 1.70A {Mycobacterium tuberculosis} PDB: 3oqt_A 2yj0_A*
Probab=16.83 E-value=3.1e+02 Score=19.90 Aligned_cols=50 Identities=12% Similarity=0.104 Sum_probs=34.0
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeeeEEEEEECCeeeEEEEeccee
Q psy8848 14 SKSEFQQLAQDMLNYAKKIGASHSSIEFNEGNGFSVFVRKGKIDVIEQNNDKN 66 (459)
Q Consensus 14 ~~~~~~~~~~~~l~~a~~~g~~~~ev~~~~~~~~~v~~~~~~i~~~~~~~~~g 66 (459)
|..-+++.++.+++.|.+- .. .+..-+...+...+++|++..++..-.-+
T Consensus 14 S~~S~edAi~nAi~~AskT-l~--ni~~~eV~e~~~~v~dgkv~~yqv~lkv~ 63 (69)
T 2yiz_A 14 SPDGVDAAIQGGLARAAQT-MR--ALDWFEVQSIRGHLVDGAVAHFQVTMKVG 63 (69)
T ss_dssp ETTCHHHHHHHHHHHHHHH-CC--CEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHhc-cc--CCeEEEEEEEEEEEeCCcEEEEEEEEEEE
Confidence 3455677888888888875 44 34444556667778999998876554333
No 8
>2bcm_B F1845 fimbrial protein; DAAE adhesin, donor strand complementation, cell adhesion; 1.48A {Escherichia coli}
Probab=15.49 E-value=1.4e+02 Score=25.14 Aligned_cols=35 Identities=26% Similarity=0.487 Sum_probs=23.9
Q ss_pred CEEEEEEeCCCccccccccEEEee-EEEEEeCCEEe
Q psy8848 378 TGLLVTELMGDGINYITGDYSKGA-FGYWIENGKIQ 412 (459)
Q Consensus 378 ~Gi~v~~~~g~~~n~~tG~Fs~~~-~g~~IenGei~ 412 (459)
.|.+...+.|-+++.-+|.|.+.. -|||+++-+-.
T Consensus 109 gG~i~i~V~GdQt~~ptG~YTLnL~GGyW~~~~~~~ 144 (165)
T 2bcm_B 109 GGHVGISVDGNQTDKPTGEYTLNLTGGYWTNDNKQT 144 (165)
T ss_dssp EEEEEEEECSCCTTSCSEEEEEEEEEEEECC-----
T ss_pred ccEEEEEEeCCcccCCCccEEEEecccEEecCcchh
Confidence 355556666767777799999999 89999987654
No 9
>3onr_A Protein transport protein SECE2; calcium dodecin, calcium binding protein, dodecamer, imuuno antigen, metal binding protein; 1.80A {Mycobacterium tuberculosis}
Probab=13.00 E-value=2.4e+02 Score=20.72 Aligned_cols=46 Identities=11% Similarity=0.064 Sum_probs=30.4
Q ss_pred CHHHHHHHHHHHHHHHHHc--CCCEEEEEEEEeeeEEEEEECCeeeEEEEecc
Q psy8848 14 SKSEFQQLAQDMLNYAKKI--GASHSSIEFNEGNGFSVFVRKGKIDVIEQNND 64 (459)
Q Consensus 14 ~~~~~~~~~~~~l~~a~~~--g~~~~ev~~~~~~~~~v~~~~~~i~~~~~~~~ 64 (459)
|..-+++.++.+++.|.+- +.+-+|| ..+...+++|++..++..-.
T Consensus 14 S~~S~edAi~nAi~~AskTl~ni~~~eV-----~e~~~~v~dgkv~~yqv~lK 61 (72)
T 3onr_A 14 SPTSWEQAAAEAVQRARDSVDDIRVARV-----IEQDMAVDSAGKITYRIKLE 61 (72)
T ss_dssp ESSCHHHHHHHHHHHHHHHCSCCCEEEE-----EEEEEEECTTCCEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHhcccCCeEEEE-----EEEEEEEeCCcEEEEEEEEE
Confidence 3445677888888888865 3444444 45556778999987665433
No 10
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=12.16 E-value=2.5e+02 Score=20.81 Aligned_cols=29 Identities=31% Similarity=0.601 Sum_probs=23.8
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEEEEE
Q psy8848 14 SKSEFQQLAQDMLNYAKKIGASHSSIEFN 42 (459)
Q Consensus 14 ~~~~~~~~~~~~l~~a~~~g~~~~ev~~~ 42 (459)
.+.+++..+..++++.+++|+.-+.|.+.
T Consensus 25 teselqkvlnelmdyikkqgakrvrisit 53 (106)
T 1qys_A 25 TESELQKVLNELMDYIKKQGAKRVRISIT 53 (106)
T ss_dssp SSSHHHHHHHHHHHHHHHHCCSEEEEEEE
T ss_pred eHHHHHHHHHHHHHHHHhcCCcEEEEEEE
Confidence 56789999999999999999886665554
Done!