Your job contains 1 sequence.
>psy8849
MNINKRQIIVIKILKDIKAQDIKVYDTSNLTNLFDRITIASGSSKRQINALAVSIRKNIK
NINNNIVNIEGKKSSEWLLLDLGDIIIHIMNPYIRNMYNLEEIWGEKEIKFN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8849
(112 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q8EHP7 - symbol:SO_1170 "Iojap-like ribosome-as... 144 4.1e-10 1
TIGR_CMR|SO_1170 - symbol:SO_1170 "iojap domain protein" ... 144 4.1e-10 1
UNIPROTKB|Q606I9 - symbol:MCA2027 "Iojap-related protein"... 122 8.7e-08 1
UNIPROTKB|Q83DY7 - symbol:CBU_0552 "Iojap protein family"... 118 2.3e-07 1
TIGR_CMR|CBU_0552 - symbol:CBU_0552 "iojap-related protei... 118 2.3e-07 1
UNIPROTKB|Q97P97 - symbol:rsfS "Ribosomal silencing facto... 116 3.8e-07 1
UNIPROTKB|Q484R0 - symbol:CPS_1717 "Iojap-related protein... 110 1.6e-06 1
TIGR_CMR|CPS_1717 - symbol:CPS_1717 "iojap-related protei... 110 1.6e-06 1
UNIPROTKB|Q5LX03 - symbol:SPO0219 "Iojap-related protein"... 105 5.5e-06 1
TIGR_CMR|SPO_0219 - symbol:SPO_0219 "iojap-related protei... 105 5.5e-06 1
UNIPROTKB|Q71ZI4 - symbol:LMOf2365_1505 "Iojap-related pr... 104 7.0e-06 1
UNIPROTKB|Q3Z9G1 - symbol:DET0393 "Iojap-like protein" sp... 95 6.3e-05 1
TIGR_CMR|DET_0393 - symbol:DET_0393 "iojap protein, homol... 95 6.3e-05 1
UNIPROTKB|Q81LQ6 - symbol:BAS4228 "Iojap-like ribosome-as... 94 8.1e-05 1
TIGR_CMR|BA_4556 - symbol:BA_4556 "iojap-related protein"... 94 8.1e-05 1
UNIPROTKB|P0AAT6 - symbol:rsfS "ribosomal silencing facto... 93 0.00010 1
UNIPROTKB|Q9KTF0 - symbol:VC_0952 "Putative uncharacteriz... 93 0.00010 1
TIGR_CMR|VC_0952 - symbol:VC_0952 "conserved hypothetical... 93 0.00010 1
UNIPROTKB|Q2GHB7 - symbol:ECH_0346 "Iojap-related protein... 91 0.00017 1
TIGR_CMR|ECH_0346 - symbol:ECH_0346 "iojap-related protei... 91 0.00017 1
>UNIPROTKB|Q8EHP7 [details] [associations]
symbol:SO_1170 "Iojap-like ribosome-associated protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR025656 Pfam:PF02410 InterPro:IPR004394
PANTHER:PTHR21043 TIGRFAMs:TIGR00090 HOGENOM:HOG000016051 KO:K09710
OMA:NIFYPEA RefSeq:NP_716795.1 ProteinModelPortal:Q8EHP7
GeneID:1168999 KEGG:son:SO_1170 PATRIC:23521980
ProtClustDB:CLSK906128 Uniprot:Q8EHP7
Length = 109
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 33/103 (32%), Positives = 50/103 (48%)
Query: 6 RQIIVIKILKDIKAQDIKVYDTSNLTNLFDRITIASGSSKRQINALAVSIRXXXXXXXXX 65
+Q +V KI D+KA+D+ V D SN +N+ D + I SG+SK + A+A ++
Sbjct: 7 KQFVVDKI-DDLKARDVVVIDVSNQSNITDYMVICSGTSKTHVKAIAENLVIEAKAAGIP 65
Query: 66 XXXXXXXXSSEWXXXXXXXXXXXXMNPYIRNMYNLEEIWGEKE 108
SSEW M R+ Y LE++W EK+
Sbjct: 66 PIGIEGRDSSEWVLVDMGNVILHVMQDQTRDFYQLEKLWSEKQ 108
>TIGR_CMR|SO_1170 [details] [associations]
symbol:SO_1170 "iojap domain protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR025656
Pfam:PF02410 InterPro:IPR004394 PANTHER:PTHR21043
TIGRFAMs:TIGR00090 HOGENOM:HOG000016051 KO:K09710 OMA:NIFYPEA
RefSeq:NP_716795.1 ProteinModelPortal:Q8EHP7 GeneID:1168999
KEGG:son:SO_1170 PATRIC:23521980 ProtClustDB:CLSK906128
Uniprot:Q8EHP7
Length = 109
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 33/103 (32%), Positives = 50/103 (48%)
Query: 6 RQIIVIKILKDIKAQDIKVYDTSNLTNLFDRITIASGSSKRQINALAVSIRXXXXXXXXX 65
+Q +V KI D+KA+D+ V D SN +N+ D + I SG+SK + A+A ++
Sbjct: 7 KQFVVDKI-DDLKARDVVVIDVSNQSNITDYMVICSGTSKTHVKAIAENLVIEAKAAGIP 65
Query: 66 XXXXXXXXSSEWXXXXXXXXXXXXMNPYIRNMYNLEEIWGEKE 108
SSEW M R+ Y LE++W EK+
Sbjct: 66 PIGIEGRDSSEWVLVDMGNVILHVMQDQTRDFYQLEKLWSEKQ 108
>UNIPROTKB|Q606I9 [details] [associations]
symbol:MCA2027 "Iojap-related protein" species:243233
"Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR025656 Pfam:PF02410 InterPro:IPR004394
PANTHER:PTHR21043 TIGRFAMs:TIGR00090 HOGENOM:HOG000016051 KO:K09710
OMA:DFLADKA RefSeq:YP_114459.1 ProteinModelPortal:Q606I9
GeneID:3103986 KEGG:mca:MCA2027 PATRIC:22607904 Uniprot:Q606I9
Length = 114
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 26/98 (26%), Positives = 42/98 (42%)
Query: 9 IVIKILKDIKAQDIKVYDTSNLTNLFDRITIASGSSKRQINALAVSIRXXXXXXXXXXXX 68
IV+ L + K +D+K+ D T + + IASG+S R + +LA ++
Sbjct: 11 IVVAALDEGKGRDVKIIDLRGKTTIAEFFVIASGTSDRHVRSLAGNVEASAKAHALQPFG 70
Query: 69 XXXXXSSEWXXXXXXXXXXXXMNPYIRNMYNLEEIWGE 106
+ EW M P +R Y LE++W E
Sbjct: 71 LEGEDAGEWVVVDLGDVVVHVMKPPVREFYQLEKLWAE 108
>UNIPROTKB|Q83DY7 [details] [associations]
symbol:CBU_0552 "Iojap protein family" species:227377
"Coxiella burnetii RSA 493" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR025656
Pfam:PF02410 InterPro:IPR004394 PANTHER:PTHR21043
TIGRFAMs:TIGR00090 HOGENOM:HOG000016051 KO:K09710 OMA:DFLADKA
RefSeq:NP_819583.1 ProteinModelPortal:Q83DY7 GeneID:1208437
KEGG:cbu:CBU_0552 PATRIC:17929803 ProtClustDB:CLSK914144
BioCyc:CBUR227377:GJ7S-555-MONOMER Uniprot:Q83DY7
Length = 116
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 29/100 (29%), Positives = 44/100 (44%)
Query: 9 IVIKILKDIKAQDIKVYDTSNLTNLFDRITIASGSSKRQINALAVSIRXXXXXXXXXXXX 68
+VI L + KA I D + LT+L DR+ + S +SKR +ALA +
Sbjct: 9 LVINTLDEHKALQITDLDVTTLTDLMDRMIVCSATSKRHASALADKVIRRAKENGIRPLG 68
Query: 69 XXXXXSSEWXXXXXXXXXXXXMNPYIRNMYNLEEIWGEKE 108
+EW M P +R+ Y+LE++W E
Sbjct: 69 VEGEAEAEWILIDLYDVIVHIMLPEVRDFYSLEKLWSVTE 108
>TIGR_CMR|CBU_0552 [details] [associations]
symbol:CBU_0552 "iojap-related protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR025656
Pfam:PF02410 InterPro:IPR004394 PANTHER:PTHR21043
TIGRFAMs:TIGR00090 HOGENOM:HOG000016051 KO:K09710 OMA:DFLADKA
RefSeq:NP_819583.1 ProteinModelPortal:Q83DY7 GeneID:1208437
KEGG:cbu:CBU_0552 PATRIC:17929803 ProtClustDB:CLSK914144
BioCyc:CBUR227377:GJ7S-555-MONOMER Uniprot:Q83DY7
Length = 116
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 29/100 (29%), Positives = 44/100 (44%)
Query: 9 IVIKILKDIKAQDIKVYDTSNLTNLFDRITIASGSSKRQINALAVSIRXXXXXXXXXXXX 68
+VI L + KA I D + LT+L DR+ + S +SKR +ALA +
Sbjct: 9 LVINTLDEHKALQITDLDVTTLTDLMDRMIVCSATSKRHASALADKVIRRAKENGIRPLG 68
Query: 69 XXXXXSSEWXXXXXXXXXXXXMNPYIRNMYNLEEIWGEKE 108
+EW M P +R+ Y+LE++W E
Sbjct: 69 VEGEAEAEWILIDLYDVIVHIMLPEVRDFYSLEKLWSVTE 108
>UNIPROTKB|Q97P97 [details] [associations]
symbol:rsfS "Ribosomal silencing factor RsfS"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] GO:GO:0005737 GO:GO:0006417
EMBL:AE005672 GenomeReviews:AE005672_GR InterPro:IPR025656
Pfam:PF02410 HAMAP:MF_01477 InterPro:IPR004394 PANTHER:PTHR21043
TIGRFAMs:TIGR00090 KO:K09710 PIR:C95203 RefSeq:NP_346180.1
ProteinModelPortal:Q97P97 EnsemblBacteria:EBSTRT00000026738
GeneID:931090 KEGG:spn:SP_1744 PATRIC:19707939 HOGENOM:HOG000016052
OMA:WKDCPVV ProtClustDB:CLSK2752117 Uniprot:Q97P97
Length = 117
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 26/106 (24%), Positives = 50/106 (47%)
Query: 3 INKRQII--VIKILKDIKAQDIKVYDTSNLTNLFDRITIASGSSKRQINALAVSIRXXXX 60
+N+++++ V+K + +A+DI D +LT++ D + I S + RQ++A+A +IR
Sbjct: 1 MNEKELLELVVKAADEKRAEDILALDVQDLTSVTDYLVITSSMNSRQLDAIAANIREKVA 60
Query: 61 XXXXXXXXXXXXXSSEWXXXXXXXXXXXXMNPYIRNMYNLEEIWGE 106
+ W + +R YNLE++W E
Sbjct: 61 QAGFKGSHVEGDAAGGWVLLDLGAVVVHIFSEEMRAHYNLEKLWHE 106
>UNIPROTKB|Q484R0 [details] [associations]
symbol:CPS_1717 "Iojap-related protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000083 GenomeReviews:CP000083_GR InterPro:IPR025656
Pfam:PF02410 eggNOG:COG0799 InterPro:IPR004394 PANTHER:PTHR21043
TIGRFAMs:TIGR00090 HOGENOM:HOG000016051 KO:K09710 OMA:DFLADKA
RefSeq:YP_268455.1 ProteinModelPortal:Q484R0 STRING:Q484R0
GeneID:3519288 KEGG:cps:CPS_1717 PATRIC:21466605
BioCyc:CPSY167879:GI48-1794-MONOMER Uniprot:Q484R0
Length = 106
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 27/106 (25%), Positives = 45/106 (42%)
Query: 1 MNINKRQIIVIKILKDIKAQDIKVYDTSNLTNLFDRITIASGSSKRQINALAVSIRXXXX 60
M + + VI+ L+D+K +DI + S+ + D + I SG+S R + ++A S+
Sbjct: 1 MQTEQLKAFVIEKLEDMKGRDIIALNISDKASFADYMIICSGNSNRHVKSIAQSVAMECR 60
Query: 61 XXXXXXXXXXXXXSSEWXXXXXXXXXXXXMNPYIRNMYNLEEIWGE 106
EW M R+ YNLE++W E
Sbjct: 61 AQGTEPRGMEGNDVGEWALVDLADIIVHVMTDEQRDKYNLEQLWAE 106
>TIGR_CMR|CPS_1717 [details] [associations]
symbol:CPS_1717 "iojap-related protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000083 GenomeReviews:CP000083_GR InterPro:IPR025656
Pfam:PF02410 eggNOG:COG0799 InterPro:IPR004394 PANTHER:PTHR21043
TIGRFAMs:TIGR00090 HOGENOM:HOG000016051 KO:K09710 OMA:DFLADKA
RefSeq:YP_268455.1 ProteinModelPortal:Q484R0 STRING:Q484R0
GeneID:3519288 KEGG:cps:CPS_1717 PATRIC:21466605
BioCyc:CPSY167879:GI48-1794-MONOMER Uniprot:Q484R0
Length = 106
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 27/106 (25%), Positives = 45/106 (42%)
Query: 1 MNINKRQIIVIKILKDIKAQDIKVYDTSNLTNLFDRITIASGSSKRQINALAVSIRXXXX 60
M + + VI+ L+D+K +DI + S+ + D + I SG+S R + ++A S+
Sbjct: 1 MQTEQLKAFVIEKLEDMKGRDIIALNISDKASFADYMIICSGNSNRHVKSIAQSVAMECR 60
Query: 61 XXXXXXXXXXXXXSSEWXXXXXXXXXXXXMNPYIRNMYNLEEIWGE 106
EW M R+ YNLE++W E
Sbjct: 61 AQGTEPRGMEGNDVGEWALVDLADIIVHVMTDEQRDKYNLEQLWAE 106
>UNIPROTKB|Q5LX03 [details] [associations]
symbol:SPO0219 "Iojap-related protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000031 GenomeReviews:CP000031_GR InterPro:IPR025656
Pfam:PF02410 InterPro:IPR004394 PANTHER:PTHR21043
TIGRFAMs:TIGR00090 HOGENOM:HOG000016051 KO:K09710
RefSeq:YP_165488.1 ProteinModelPortal:Q5LX03 GeneID:3195586
KEGG:sil:SPO0219 PATRIC:23373687 OMA:NIFYPEA ProtClustDB:CLSK759049
Uniprot:Q5LX03
Length = 128
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 24/95 (25%), Positives = 40/95 (42%)
Query: 10 VIKILKDIKAQDIKVYDTSNLTNLFDRITIASGSSKRQINALAVSIRXXXXXXXXXXXXX 69
++ L D KA+D+ D T++ D + IASG S RQ++A+A +
Sbjct: 24 ILTSLNDDKAEDLVQIDLRGKTSMGDYMVIASGRSTRQVSAMAEKLVQRLKDEFGLNSKI 83
Query: 70 XXXXSSEWXXXXXXXXXXXXMNPYIRNMYNLEEIW 104
+ +W P +R Y LE++W
Sbjct: 84 EGKDAGDWVLIDTGDVIVHIFRPEVREFYQLEKMW 118
>TIGR_CMR|SPO_0219 [details] [associations]
symbol:SPO_0219 "iojap-related protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000031 GenomeReviews:CP000031_GR InterPro:IPR025656
Pfam:PF02410 InterPro:IPR004394 PANTHER:PTHR21043
TIGRFAMs:TIGR00090 HOGENOM:HOG000016051 KO:K09710
RefSeq:YP_165488.1 ProteinModelPortal:Q5LX03 GeneID:3195586
KEGG:sil:SPO0219 PATRIC:23373687 OMA:NIFYPEA ProtClustDB:CLSK759049
Uniprot:Q5LX03
Length = 128
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 24/95 (25%), Positives = 40/95 (42%)
Query: 10 VIKILKDIKAQDIKVYDTSNLTNLFDRITIASGSSKRQINALAVSIRXXXXXXXXXXXXX 69
++ L D KA+D+ D T++ D + IASG S RQ++A+A +
Sbjct: 24 ILTSLNDDKAEDLVQIDLRGKTSMGDYMVIASGRSTRQVSAMAEKLVQRLKDEFGLNSKI 83
Query: 70 XXXXSSEWXXXXXXXXXXXXMNPYIRNMYNLEEIW 104
+ +W P +R Y LE++W
Sbjct: 84 EGKDAGDWVLIDTGDVIVHIFRPEVREFYQLEKMW 118
>UNIPROTKB|Q71ZI4 [details] [associations]
symbol:LMOf2365_1505 "Iojap-related protein" species:265669
"Listeria monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE017262 GenomeReviews:AE017262_GR
InterPro:IPR025656 Pfam:PF02410 eggNOG:COG0799 InterPro:IPR004394
PANTHER:PTHR21043 TIGRFAMs:TIGR00090 KO:K09710 HOGENOM:HOG000016052
OMA:WKDCPVV RefSeq:YP_014103.1 ProteinModelPortal:Q71ZI4 SMR:Q71ZI4
STRING:Q71ZI4 GeneID:2797694 KEGG:lmf:LMOf2365_1505 PATRIC:20324249
ProtClustDB:CLSK564446 Uniprot:Q71ZI4
Length = 118
Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 25/106 (23%), Positives = 44/106 (41%)
Query: 1 MNINKRQIIVIKILKDIKAQDIKVYDTSNLTNLFDRITIASGSSKRQINALAVSIRXXXX 60
MN ++ K D +A+DI D L++ D I G+S +Q+ A+A I+
Sbjct: 1 MNSYDTLMLTAKAADDKRAEDILALDMKGLSSFADYFVICHGNSDKQVQAIAREIKEKAL 60
Query: 61 XXXXXXXXXXXXXSSEWXXXXXXXXXXXXMNPYIRNMYNLEEIWGE 106
+++W + R+ YNLE++WG+
Sbjct: 61 ENQVDVKRLEGFDAAKWILIDLGDVIIHVFHKEERSYYNLEKLWGD 106
>UNIPROTKB|Q3Z9G1 [details] [associations]
symbol:DET0393 "Iojap-like protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000027 GenomeReviews:CP000027_GR InterPro:IPR025656
Pfam:PF02410 eggNOG:COG0799 InterPro:IPR004394 PANTHER:PTHR21043
TIGRFAMs:TIGR00090 KO:K09710 HOGENOM:HOG000016052 OMA:WKDCPVV
RefSeq:YP_181138.1 ProteinModelPortal:Q3Z9G1 STRING:Q3Z9G1
GeneID:3230271 KEGG:det:DET0393 PATRIC:21607853
ProtClustDB:CLSK935635 BioCyc:DETH243164:GJNF-393-MONOMER
Uniprot:Q3Z9G1
Length = 114
Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 22/95 (23%), Positives = 39/95 (41%)
Query: 10 VIKILKDIKAQDIKVYDTSNLTNLFDRITIASGSSKRQINALAVSIRXXXXXXXXXXXXX 69
++ I + +A+DI + D L + D + SG+S RQ++A+A ++
Sbjct: 10 MVSIASEKQAEDIVLLDVRELVSYCDYFVLMSGASGRQLSAIADTVEKTFKPLKIGPRHR 69
Query: 70 XXXXSSEWXXXXXXXXXXXXMNPYIRNMYNLEEIW 104
S W P IR+ Y L+ +W
Sbjct: 70 EGDADSGWILLDFGGVIAHIFTPEIRSYYKLDRLW 104
>TIGR_CMR|DET_0393 [details] [associations]
symbol:DET_0393 "iojap protein, homolog" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000027 GenomeReviews:CP000027_GR InterPro:IPR025656
Pfam:PF02410 eggNOG:COG0799 InterPro:IPR004394 PANTHER:PTHR21043
TIGRFAMs:TIGR00090 KO:K09710 HOGENOM:HOG000016052 OMA:WKDCPVV
RefSeq:YP_181138.1 ProteinModelPortal:Q3Z9G1 STRING:Q3Z9G1
GeneID:3230271 KEGG:det:DET0393 PATRIC:21607853
ProtClustDB:CLSK935635 BioCyc:DETH243164:GJNF-393-MONOMER
Uniprot:Q3Z9G1
Length = 114
Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 22/95 (23%), Positives = 39/95 (41%)
Query: 10 VIKILKDIKAQDIKVYDTSNLTNLFDRITIASGSSKRQINALAVSIRXXXXXXXXXXXXX 69
++ I + +A+DI + D L + D + SG+S RQ++A+A ++
Sbjct: 10 MVSIASEKQAEDIVLLDVRELVSYCDYFVLMSGASGRQLSAIADTVEKTFKPLKIGPRHR 69
Query: 70 XXXXSSEWXXXXXXXXXXXXMNPYIRNMYNLEEIW 104
S W P IR+ Y L+ +W
Sbjct: 70 EGDADSGWILLDFGGVIAHIFTPEIRSYYKLDRLW 104
>UNIPROTKB|Q81LQ6 [details] [associations]
symbol:BAS4228 "Iojap-like ribosome-associated protein"
species:1392 "Bacillus anthracis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
InterPro:IPR025656 Pfam:PF02410 InterPro:IPR004394
PANTHER:PTHR21043 TIGRFAMs:TIGR00090 KO:K09710 HOGENOM:HOG000016052
OMA:WKDCPVV RefSeq:NP_846778.1 RefSeq:YP_021202.1
RefSeq:YP_030476.1 ProteinModelPortal:Q81LQ6 SMR:Q81LQ6
DNASU:1088286 EnsemblBacteria:EBBACT00000012032
EnsemblBacteria:EBBACT00000017089 EnsemblBacteria:EBBACT00000023148
GeneID:1088286 GeneID:2818984 GeneID:2848417 KEGG:ban:BA_4556
KEGG:bar:GBAA_4556 KEGG:bat:BAS4228 ProtClustDB:CLSK917357
BioCyc:BANT260799:GJAJ-4284-MONOMER
BioCyc:BANT261594:GJ7F-4431-MONOMER Uniprot:Q81LQ6
Length = 118
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 22/99 (22%), Positives = 39/99 (39%)
Query: 8 IIVIKILKDIKAQDIKVYDTSNLTNLFDRITIASGSSKRQINALAVSIRXXXXXXXXXXX 67
++ K D +A+D+ V + ++ + D I G+S +Q+ A+A I+
Sbjct: 8 VLAAKAADDKRAEDMVVLNMQGISPIADYFIICHGNSDKQVQAIAREIKAKAHEFQIDVQ 67
Query: 68 XXXXXXSSEWXXXXXXXXXXXXMNPYIRNMYNLEEIWGE 106
+ W RN YNLE +WG+
Sbjct: 68 RMEGFDEARWVLVDLGDVVAHVFYKDERNHYNLERLWGD 106
>TIGR_CMR|BA_4556 [details] [associations]
symbol:BA_4556 "iojap-related protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
InterPro:IPR025656 Pfam:PF02410 InterPro:IPR004394
PANTHER:PTHR21043 TIGRFAMs:TIGR00090 KO:K09710 HOGENOM:HOG000016052
OMA:WKDCPVV RefSeq:NP_846778.1 RefSeq:YP_021202.1
RefSeq:YP_030476.1 ProteinModelPortal:Q81LQ6 SMR:Q81LQ6
DNASU:1088286 EnsemblBacteria:EBBACT00000012032
EnsemblBacteria:EBBACT00000017089 EnsemblBacteria:EBBACT00000023148
GeneID:1088286 GeneID:2818984 GeneID:2848417 KEGG:ban:BA_4556
KEGG:bar:GBAA_4556 KEGG:bat:BAS4228 ProtClustDB:CLSK917357
BioCyc:BANT260799:GJAJ-4284-MONOMER
BioCyc:BANT261594:GJ7F-4431-MONOMER Uniprot:Q81LQ6
Length = 118
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 22/99 (22%), Positives = 39/99 (39%)
Query: 8 IIVIKILKDIKAQDIKVYDTSNLTNLFDRITIASGSSKRQINALAVSIRXXXXXXXXXXX 67
++ K D +A+D+ V + ++ + D I G+S +Q+ A+A I+
Sbjct: 8 VLAAKAADDKRAEDMVVLNMQGISPIADYFIICHGNSDKQVQAIAREIKAKAHEFQIDVQ 67
Query: 68 XXXXXXSSEWXXXXXXXXXXXXMNPYIRNMYNLEEIWGE 106
+ W RN YNLE +WG+
Sbjct: 68 RMEGFDEARWVLVDLGDVVAHVFYKDERNHYNLERLWGD 106
>UNIPROTKB|P0AAT6 [details] [associations]
symbol:rsfS "ribosomal silencing factor" species:83333
"Escherichia coli K-12" [GO:0017148 "negative regulation of
translation" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0090071 "negative regulation of ribosome
biogenesis" evidence=IDA] [GO:0043023 "ribosomal large subunit
binding" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA]
GO:GO:0005737 GO:GO:0017148 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR EMBL:U82598
InterPro:IPR025656 Pfam:PF02410 eggNOG:COG0799 HAMAP:MF_01477
InterPro:IPR004394 PANTHER:PTHR21043 TIGRFAMs:TIGR00090 EMBL:X04516
RefSeq:NP_415170.4 RefSeq:YP_488928.1 ProteinModelPortal:P0AAT6
SMR:P0AAT6 DIP:DIP-48141N IntAct:P0AAT6 MINT:MINT-1226369
PaxDb:P0AAT6 PRIDE:P0AAT6 EnsemblBacteria:EBESCT00000001697
EnsemblBacteria:EBESCT00000017417 GeneID:12932664 GeneID:945237
KEGG:ecj:Y75_p0627 KEGG:eco:b0637 PATRIC:32116457 EchoBASE:EB1235
EcoGene:EG11255 HOGENOM:HOG000016051 KO:K09710 OMA:WGDAKIT
ProtClustDB:PRK11538 BioCyc:EcoCyc:EG11255-MONOMER
BioCyc:ECOL316407:JW5090-MONOMER Genevestigator:P0AAT6
GO:GO:0090071 Uniprot:P0AAT6
Length = 105
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 23/98 (23%), Positives = 40/98 (40%)
Query: 7 QIIVIKILKDIKAQDIKVYDTSNLTNLFDRITIASGSSKRQINALAVSIRXXXXXXXXXX 66
Q VI + D+K QDI D +++ D + I +G+S R + ++A +
Sbjct: 7 QDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTSSRHVMSIADHVVQESRAAGLLP 66
Query: 67 XXXXXXXSSEWXXXXXXXXXXXXMNPYIRNMYNLEEIW 104
S++W M R +Y LE++W
Sbjct: 67 LGVEGENSADWIVVDLGDVIVHVMQEESRRLYELEKLW 104
>UNIPROTKB|Q9KTF0 [details] [associations]
symbol:VC_0952 "Putative uncharacterized protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE003852 GenomeReviews:AE003852_GR
InterPro:IPR025656 Pfam:PF02410 InterPro:IPR004394
PANTHER:PTHR21043 TIGRFAMs:TIGR00090 KO:K09710 OMA:NIFYPEA
PIR:C82260 RefSeq:NP_230599.1 ProteinModelPortal:Q9KTF0
DNASU:2614205 GeneID:2614205 KEGG:vch:VC0952 PATRIC:20081006
ProtClustDB:CLSK874161 Uniprot:Q9KTF0
Length = 105
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 21/90 (23%), Positives = 36/90 (40%)
Query: 16 DIKAQDIKVYDTSNLTNLFDRITIASGSSKRQINALAVSIRXXXXXXXXXXXXXXXXXSS 75
D+KA DI D +++ D + + +G+SKR + ++A +
Sbjct: 16 DMKAVDIVTLDVKEKSSVTDYMIVCTGTSKRHVASIAEHVANEAKLSGLQPLGMNGENEG 75
Query: 76 EWXXXXXXXXXXXXMNPYIRNMYNLEEIWG 105
EW M R +Y LE++WG
Sbjct: 76 EWVVLDMGSVMLHVMQEAPRELYQLEKLWG 105
>TIGR_CMR|VC_0952 [details] [associations]
symbol:VC_0952 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE003852
GenomeReviews:AE003852_GR InterPro:IPR025656 Pfam:PF02410
InterPro:IPR004394 PANTHER:PTHR21043 TIGRFAMs:TIGR00090 KO:K09710
OMA:NIFYPEA PIR:C82260 RefSeq:NP_230599.1 ProteinModelPortal:Q9KTF0
DNASU:2614205 GeneID:2614205 KEGG:vch:VC0952 PATRIC:20081006
ProtClustDB:CLSK874161 Uniprot:Q9KTF0
Length = 105
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 21/90 (23%), Positives = 36/90 (40%)
Query: 16 DIKAQDIKVYDTSNLTNLFDRITIASGSSKRQINALAVSIRXXXXXXXXXXXXXXXXXSS 75
D+KA DI D +++ D + + +G+SKR + ++A +
Sbjct: 16 DMKAVDIVTLDVKEKSSVTDYMIVCTGTSKRHVASIAEHVANEAKLSGLQPLGMNGENEG 75
Query: 76 EWXXXXXXXXXXXXMNPYIRNMYNLEEIWG 105
EW M R +Y LE++WG
Sbjct: 76 EWVVLDMGSVMLHVMQEAPRELYQLEKLWG 105
>UNIPROTKB|Q2GHB7 [details] [associations]
symbol:ECH_0346 "Iojap-related protein" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP000236 GenomeReviews:CP000236_GR
InterPro:IPR025656 Pfam:PF02410 eggNOG:COG0799 InterPro:IPR004394
PANTHER:PTHR21043 TIGRFAMs:TIGR00090 HOGENOM:HOG000016051 KO:K09710
RefSeq:YP_507166.1 ProteinModelPortal:Q2GHB7 STRING:Q2GHB7
GeneID:3927033 KEGG:ech:ECH_0346 PATRIC:20576189 OMA:LCIDFGS
ProtClustDB:CLSK749595 BioCyc:ECHA205920:GJNR-346-MONOMER
Uniprot:Q2GHB7
Length = 123
Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
Identities = 25/99 (25%), Positives = 38/99 (38%)
Query: 9 IVIKILKDIKAQDIKVYDTSNLTNLFDRITIASGSSKRQINALAVSIRXXXXXXXXXXXX 68
+++ IL KA +I + SN +NL + + IASG S + +LA IR
Sbjct: 19 LIVFILDKHKANNIVTINISNKSNLAEHLIIASGESSYHVKSLAERIRKEIKPHKKLSIE 78
Query: 69 XXXXXSSEWXXXXXXXXXXXXMNPYIRNMYNLEEIWGEK 107
W P +R Y LE +W +
Sbjct: 79 GLK--DGNWVVINCYNILIHIFRPEVREYYQLENLWNSQ 115
>TIGR_CMR|ECH_0346 [details] [associations]
symbol:ECH_0346 "iojap-related protein" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP000236 GenomeReviews:CP000236_GR
InterPro:IPR025656 Pfam:PF02410 eggNOG:COG0799 InterPro:IPR004394
PANTHER:PTHR21043 TIGRFAMs:TIGR00090 HOGENOM:HOG000016051 KO:K09710
RefSeq:YP_507166.1 ProteinModelPortal:Q2GHB7 STRING:Q2GHB7
GeneID:3927033 KEGG:ech:ECH_0346 PATRIC:20576189 OMA:LCIDFGS
ProtClustDB:CLSK749595 BioCyc:ECHA205920:GJNR-346-MONOMER
Uniprot:Q2GHB7
Length = 123
Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
Identities = 25/99 (25%), Positives = 38/99 (38%)
Query: 9 IVIKILKDIKAQDIKVYDTSNLTNLFDRITIASGSSKRQINALAVSIRXXXXXXXXXXXX 68
+++ IL KA +I + SN +NL + + IASG S + +LA IR
Sbjct: 19 LIVFILDKHKANNIVTINISNKSNLAEHLIIASGESSYHVKSLAERIRKEIKPHKKLSIE 78
Query: 69 XXXXXSSEWXXXXXXXXXXXXMNPYIRNMYNLEEIWGEK 107
W P +R Y LE +W +
Sbjct: 79 GLK--DGNWVVINCYNILIHIFRPEVREYYQLENLWNSQ 115
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 112 83 0.00091 102 3 11 22 0.42 29
29 0.44 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 529 (56 KB)
Total size of DFA: 97 KB (2069 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 7.21u 0.17s 7.38t Elapsed: 00:00:00
Total cpu time: 7.21u 0.17s 7.38t Elapsed: 00:00:00
Start: Thu Aug 15 17:43:39 2013 End: Thu Aug 15 17:43:39 2013